Query 002468
Match_columns 918
No_of_seqs 549 out of 3342
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 00:32:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002468.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002468hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03064 alpha,alpha-trehalose 100.0 7E-187 2E-191 1679.9 95.1 906 1-910 1-932 (934)
2 PLN02205 alpha,alpha-trehalose 100.0 2E-155 5E-160 1415.1 79.4 727 93-910 59-850 (854)
3 PLN03063 alpha,alpha-trehalose 100.0 5E-153 1E-157 1395.9 87.5 760 93-910 10-789 (797)
4 PRK14501 putative bifunctional 100.0 1E-139 2E-144 1280.9 80.6 703 94-906 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 2E-118 3E-123 1060.2 62.1 703 93-902 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 3E-113 6E-118 976.1 48.5 440 94-546 2-457 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 1E-109 3E-114 956.4 48.1 435 99-542 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 4E-110 8E-115 963.2 40.1 443 95-542 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 7E-107 2E-111 918.1 47.9 444 90-543 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 7E-102 1E-106 897.1 52.7 438 95-541 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 2E-91 4.4E-96 814.5 48.9 437 95-540 1-459 (460)
12 COG1877 OtsB Trehalose-6-phosp 100.0 2.6E-39 5.6E-44 345.0 25.4 253 558-909 4-256 (266)
13 PLN02151 trehalose-phosphatase 100.0 8.9E-39 1.9E-43 352.7 25.8 246 565-909 91-349 (354)
14 PLN03017 trehalose-phosphatase 100.0 2.8E-38 6.1E-43 349.6 27.9 252 558-908 97-362 (366)
15 PLN02580 trehalose-phosphatase 100.0 6E-38 1.3E-42 350.0 27.8 247 564-909 111-381 (384)
16 PF02358 Trehalose_PPase: Treh 100.0 3.8E-39 8.3E-44 344.0 14.1 203 576-793 1-205 (235)
17 TIGR02468 sucrsPsyn_pln sucros 100.0 4E-35 8.8E-40 357.7 49.6 528 213-791 311-994 (1050)
18 TIGR00685 T6PP trehalose-phosp 100.0 5.4E-36 1.2E-40 321.5 27.5 238 570-905 1-243 (244)
19 PRK10187 trehalose-6-phosphate 100.0 6.9E-36 1.5E-40 324.2 27.1 236 572-910 14-249 (266)
20 PRK15484 lipopolysaccharide 1, 99.9 1.6E-24 3.5E-29 247.4 33.2 272 211-542 98-377 (380)
21 PLN02939 transferase, transfer 99.9 3.9E-24 8.4E-29 258.3 35.5 320 193-544 591-968 (977)
22 cd03792 GT1_Trehalose_phosphor 99.9 8.9E-25 1.9E-29 248.1 28.2 300 191-542 65-371 (372)
23 PRK00654 glgA glycogen synthas 99.9 3.4E-24 7.5E-29 251.1 32.9 295 212-542 118-462 (466)
24 PLN02316 synthase/transferase 99.9 7.3E-24 1.6E-28 260.3 35.8 309 192-543 689-1034(1036)
25 TIGR02472 sucr_P_syn_N sucrose 99.9 3E-24 6.4E-29 249.8 30.8 312 197-540 99-438 (439)
26 TIGR02095 glgA glycogen/starch 99.9 8.1E-24 1.8E-28 248.4 31.6 311 195-541 111-471 (473)
27 PRK14098 glycogen synthase; Pr 99.9 9.8E-24 2.1E-28 248.1 31.2 321 188-542 117-485 (489)
28 PRK15427 colanic acid biosynth 99.9 3.6E-23 7.9E-28 238.3 32.9 283 205-541 109-404 (406)
29 PRK14099 glycogen synthase; Pr 99.9 3.2E-23 6.9E-28 243.5 32.9 295 212-543 133-479 (485)
30 TIGR03449 mycothiol_MshA UDP-N 99.9 1.3E-22 2.8E-27 232.7 35.1 289 212-543 101-402 (405)
31 cd03818 GT1_ExpC_like This fam 99.9 6.8E-23 1.5E-27 234.9 29.0 284 212-537 87-395 (396)
32 TIGR02470 sucr_synth sucrose s 99.9 3.9E-22 8.4E-27 240.3 35.5 331 192-540 364-745 (784)
33 cd03791 GT1_Glycogen_synthase_ 99.9 2.6E-22 5.5E-27 235.6 32.4 311 193-539 110-473 (476)
34 PLN00142 sucrose synthase 99.9 9.5E-22 2E-26 237.0 33.7 331 192-540 387-768 (815)
35 PLN02871 UDP-sulfoquinovose:DA 99.9 7.3E-22 1.6E-26 231.5 31.1 277 212-543 144-435 (465)
36 TIGR02149 glgA_Coryne glycogen 99.9 1.8E-21 3.9E-26 221.3 31.3 287 211-542 82-386 (388)
37 cd03800 GT1_Sucrose_synthase T 99.9 2.5E-21 5.4E-26 219.7 32.4 295 204-537 93-397 (398)
38 cd03796 GT1_PIG-A_like This fa 99.9 1.9E-21 4.2E-26 223.2 31.2 278 212-543 88-368 (398)
39 cd03813 GT1_like_3 This family 99.9 1.7E-21 3.7E-26 229.0 29.8 283 205-538 166-472 (475)
40 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.1E-22 2.3E-27 212.1 17.1 194 574-793 1-200 (204)
41 TIGR03088 stp2 sugar transfera 99.9 5.1E-21 1.1E-25 217.0 32.2 232 268-542 136-372 (374)
42 cd05844 GT1_like_7 Glycosyltra 99.9 1.2E-20 2.6E-25 212.2 30.9 275 206-537 77-365 (367)
43 cd03806 GT1_ALG11_like This fa 99.9 1.6E-20 3.4E-25 217.4 31.4 273 213-531 108-415 (419)
44 cd04951 GT1_WbdM_like This fam 99.9 1.8E-20 3.9E-25 209.3 30.3 276 212-540 79-358 (360)
45 cd03805 GT1_ALG2_like This fam 99.9 2.1E-20 4.5E-25 212.9 31.3 283 211-535 93-391 (392)
46 PRK15490 Vi polysaccharide bio 99.9 2.7E-20 5.8E-25 215.8 31.0 285 212-542 280-575 (578)
47 PLN02949 transferase, transfer 99.9 5.3E-20 1.1E-24 214.7 33.4 314 162-543 109-457 (463)
48 cd04962 GT1_like_5 This family 99.9 1.1E-19 2.4E-24 204.7 33.1 276 212-541 84-369 (371)
49 cd03819 GT1_WavL_like This fam 99.9 5.1E-20 1.1E-24 205.7 28.8 266 212-527 78-349 (355)
50 TIGR02918 accessory Sec system 99.9 9.5E-20 2.1E-24 214.4 32.4 274 210-541 209-498 (500)
51 PRK10307 putative glycosyl tra 99.9 1.4E-19 3E-24 208.6 32.3 285 211-544 105-409 (412)
52 PRK15179 Vi polysaccharide bio 99.9 6.7E-20 1.5E-24 221.2 30.1 280 212-539 400-690 (694)
53 cd03812 GT1_CapH_like This fam 99.9 5.9E-20 1.3E-24 205.4 27.8 251 212-512 80-335 (358)
54 cd03809 GT1_mtfB_like This fam 99.9 2.6E-20 5.6E-25 207.3 24.3 276 211-537 84-364 (365)
55 cd03821 GT1_Bme6_like This fam 99.9 1.1E-19 2.4E-24 201.4 28.4 278 210-537 85-374 (375)
56 cd04946 GT1_AmsK_like This fam 99.9 3.7E-19 8E-24 205.2 32.1 272 212-537 127-406 (407)
57 cd03822 GT1_ecORF704_like This 99.9 2.6E-19 5.6E-24 199.3 29.2 280 212-540 76-365 (366)
58 PRK15126 thiamin pyrimidine py 99.9 2.8E-20 6E-25 202.9 20.9 191 572-793 2-225 (272)
59 COG0561 Cof Predicted hydrolas 99.9 2.2E-20 4.8E-25 202.7 19.9 194 571-793 2-226 (264)
60 cd03793 GT1_Glycogen_synthase_ 99.9 4.1E-19 9E-24 206.0 31.2 304 211-539 147-583 (590)
61 cd04949 GT1_gtfA_like This fam 99.8 1.7E-19 3.7E-24 204.2 26.9 274 202-534 90-370 (372)
62 PRK10976 putative hydrolase; P 99.8 6.7E-20 1.5E-24 199.1 21.7 193 572-793 2-227 (266)
63 PRK03669 mannosyl-3-phosphogly 99.8 1.1E-19 2.5E-24 198.2 23.4 187 571-793 6-227 (271)
64 cd03799 GT1_amsK_like This is 99.8 6.5E-19 1.4E-23 196.3 29.8 265 212-533 79-352 (355)
65 PRK01158 phosphoglycolate phos 99.8 9.4E-20 2E-24 193.4 21.7 182 572-793 3-194 (230)
66 PRK10513 sugar phosphate phosp 99.8 6.5E-20 1.4E-24 199.5 20.1 191 572-793 3-233 (270)
67 cd03807 GT1_WbnK_like This fam 99.8 1.1E-18 2.5E-23 192.5 29.8 277 212-539 80-363 (365)
68 cd03817 GT1_UGDG_like This fam 99.8 7.9E-19 1.7E-23 194.8 28.5 271 212-538 84-369 (374)
69 PHA01633 putative glycosyl tra 99.8 8.8E-19 1.9E-23 195.2 28.2 195 312-537 118-334 (335)
70 cd03801 GT1_YqgM_like This fam 99.8 1.7E-18 3.6E-23 190.1 30.1 282 212-540 85-373 (374)
71 PRK10125 putative glycosyl tra 99.8 1.1E-18 2.3E-23 201.1 28.8 187 307-541 212-403 (405)
72 cd03798 GT1_wlbH_like This fam 99.8 2E-18 4.4E-23 190.4 29.9 282 211-542 92-376 (377)
73 cd03794 GT1_wbuB_like This fam 99.8 2.6E-18 5.7E-23 191.0 30.7 279 210-536 97-393 (394)
74 cd03814 GT1_like_2 This family 99.8 1.3E-18 2.8E-23 193.2 27.5 272 212-540 83-363 (364)
75 PRK09922 UDP-D-galactose:(gluc 99.8 1.2E-18 2.6E-23 197.4 27.3 235 212-510 84-326 (359)
76 TIGR03087 stp1 sugar transfera 99.8 3E-18 6.5E-23 196.7 30.3 279 200-540 90-394 (397)
77 cd03820 GT1_amsD_like This fam 99.8 1.7E-18 3.7E-23 189.5 26.7 262 212-537 83-347 (348)
78 PLN02846 digalactosyldiacylgly 99.8 7.8E-19 1.7E-23 202.8 24.6 264 212-541 116-390 (462)
79 PF08282 Hydrolase_3: haloacid 99.8 6.2E-19 1.3E-23 187.5 20.6 184 575-793 1-223 (254)
80 cd03823 GT1_ExpE7_like This fa 99.8 8.4E-18 1.8E-22 186.1 29.4 257 212-538 96-355 (359)
81 PLN02887 hydrolase family prot 99.8 1.1E-18 2.3E-23 206.5 23.4 198 564-793 301-544 (580)
82 PHA01630 putative group 1 glyc 99.8 2.9E-18 6.4E-23 192.2 25.2 212 268-541 94-329 (331)
83 cd03795 GT1_like_4 This family 99.8 1.3E-17 2.8E-22 186.0 29.4 262 211-526 82-349 (357)
84 cd03808 GT1_cap1E_like This fa 99.8 1.1E-17 2.3E-22 184.0 27.9 273 212-537 80-358 (359)
85 TIGR01482 SPP-subfamily Sucros 99.8 1.2E-18 2.5E-23 184.3 19.1 181 575-793 1-186 (225)
86 PRK10530 pyridoxal phosphate ( 99.8 2.8E-18 6.1E-23 186.6 22.5 191 572-793 3-236 (272)
87 cd03816 GT1_ALG1_like This fam 99.8 6.3E-18 1.4E-22 195.5 26.6 278 211-537 94-408 (415)
88 PLN02501 digalactosyldiacylgly 99.8 2.7E-18 5.8E-23 200.9 23.4 262 212-538 434-705 (794)
89 cd03802 GT1_AviGT4_like This f 99.8 1.5E-17 3.2E-22 184.3 27.9 242 212-538 87-332 (335)
90 PTZ00174 phosphomannomutase; P 99.8 6.1E-18 1.3E-22 182.1 21.1 198 570-793 3-225 (247)
91 cd03804 GT1_wbaZ_like This fam 99.8 2.1E-17 4.7E-22 185.7 25.9 248 211-535 82-349 (351)
92 cd04955 GT1_like_6 This family 99.8 5E-17 1.1E-21 181.9 27.5 268 212-540 84-362 (363)
93 TIGR01485 SPP_plant-cyano sucr 99.8 3.8E-18 8.2E-23 183.9 16.6 191 572-791 1-202 (249)
94 TIGR02471 sucr_syn_bact_C sucr 99.8 1.3E-17 2.7E-22 178.3 19.8 183 574-792 1-195 (236)
95 TIGR00099 Cof-subfamily Cof su 99.8 1.5E-17 3.2E-22 179.8 19.3 191 574-793 1-225 (256)
96 cd03811 GT1_WabH_like This fam 99.8 9E-17 2E-21 175.9 24.9 246 212-508 81-332 (353)
97 PLN02423 phosphomannomutase 99.8 6.8E-17 1.5E-21 173.7 23.2 191 572-791 7-223 (245)
98 TIGR02463 MPGP_rel mannosyl-3- 99.8 2.1E-17 4.6E-22 174.5 18.3 184 574-793 1-216 (221)
99 TIGR01487 SPP-like sucrose-pho 99.8 2.3E-17 4.9E-22 173.8 18.4 181 573-793 2-184 (215)
100 PLN02275 transferase, transfer 99.7 3.2E-16 6.9E-21 178.7 28.2 240 211-506 99-371 (371)
101 cd03825 GT1_wcfI_like This fam 99.7 3.9E-16 8.5E-21 174.6 27.0 195 307-541 159-363 (365)
102 TIGR01486 HAD-SF-IIB-MPGP mann 99.7 5.7E-17 1.2E-21 175.4 19.1 181 574-793 1-215 (256)
103 PRK00192 mannosyl-3-phosphogly 99.7 3.9E-16 8.5E-21 170.6 19.7 184 572-793 4-228 (273)
104 COG0297 GlgA Glycogen synthase 99.7 2.8E-15 6.1E-20 173.6 27.3 266 212-509 130-443 (487)
105 PF00534 Glycos_transf_1: Glyc 99.7 5.4E-16 1.2E-20 156.3 16.6 156 342-522 13-171 (172)
106 PRK05749 3-deoxy-D-manno-octul 99.7 9.2E-15 2E-19 169.5 28.9 274 204-527 117-406 (425)
107 PRK14502 bifunctional mannosyl 99.7 8.1E-16 1.8E-20 181.3 19.1 187 571-793 415-652 (694)
108 PRK12702 mannosyl-3-phosphogly 99.7 1.5E-15 3.3E-20 163.3 18.7 188 572-793 1-247 (302)
109 PLN02382 probable sucrose-phos 99.7 4.5E-16 9.8E-21 178.9 15.7 199 567-792 4-214 (413)
110 TIGR02461 osmo_MPG_phos mannos 99.6 1.1E-15 2.5E-20 162.2 14.0 186 574-793 1-220 (225)
111 PF05116 S6PP: Sucrose-6F-phos 99.6 3.4E-15 7.4E-20 160.7 10.5 187 572-791 2-200 (247)
112 KOG1111 N-acetylglucosaminyltr 99.6 4.3E-14 9.3E-19 152.6 17.8 185 288-508 147-335 (426)
113 cd04950 GT1_like_1 Glycosyltra 99.5 1.3E-12 2.8E-17 149.2 26.7 263 212-541 102-370 (373)
114 PLN02605 monogalactosyldiacylg 99.5 9.6E-12 2.1E-16 142.5 28.2 215 268-537 150-376 (382)
115 KOG0853 Glycosyltransferase [C 99.4 9E-12 1.9E-16 142.8 21.8 249 264-543 205-464 (495)
116 COG0438 RfaG Glycosyltransfera 99.4 4.6E-11 1E-15 129.2 22.5 197 308-541 173-375 (381)
117 PRK13609 diacylglycerol glucos 99.3 6.6E-10 1.4E-14 127.0 28.5 270 203-545 96-374 (380)
118 cd01635 Glycosyltransferase_GT 99.3 1.4E-10 3.1E-15 119.9 19.6 118 349-490 109-229 (229)
119 cd03785 GT1_MurG MurG is an N- 99.3 5.3E-10 1.1E-14 125.7 25.3 241 212-530 89-345 (350)
120 PRK00726 murG undecaprenyldiph 99.3 5.4E-10 1.2E-14 126.4 23.6 251 212-540 91-355 (357)
121 TIGR01133 murG undecaprenyldip 99.2 7.6E-10 1.7E-14 124.3 21.8 181 310-534 153-346 (348)
122 TIGR00236 wecB UDP-N-acetylglu 99.2 4E-09 8.6E-14 120.0 25.2 241 213-509 87-335 (365)
123 TIGR02094 more_P_ylases alpha- 99.2 2E-08 4.4E-13 120.6 32.0 149 343-506 388-554 (601)
124 cd03786 GT1_UDP-GlcNAc_2-Epime 99.2 5.1E-09 1.1E-13 118.4 24.4 244 212-510 88-339 (363)
125 COG3769 Predicted hydrolase (H 99.2 2.6E-10 5.7E-15 115.9 12.1 191 571-793 6-230 (274)
126 PRK13608 diacylglycerol glucos 99.1 8.7E-09 1.9E-13 118.6 26.3 261 212-544 104-373 (391)
127 KOG1387 Glycosyltransferase [C 99.1 2.4E-08 5.1E-13 107.9 25.4 308 192-542 126-458 (465)
128 TIGR03713 acc_sec_asp1 accesso 99.0 4.7E-08 1E-12 116.0 25.1 276 195-529 203-508 (519)
129 PRK09814 beta-1,6-galactofuran 99.0 7.7E-08 1.7E-12 108.4 25.0 239 206-525 58-314 (333)
130 PF13692 Glyco_trans_1_4: Glyc 99.0 2.4E-09 5.1E-14 103.5 11.0 129 344-507 2-134 (135)
131 PRK00025 lpxB lipid-A-disaccha 99.0 6.8E-08 1.5E-12 110.2 24.3 150 337-520 176-352 (380)
132 PF05693 Glycogen_syn: Glycoge 98.9 1.6E-06 3.4E-11 101.6 31.5 300 215-538 146-577 (633)
133 cd04299 GT1_Glycogen_Phosphory 98.9 5.7E-07 1.2E-11 110.2 28.5 133 345-492 479-617 (778)
134 cd01427 HAD_like Haloacid deha 98.5 3E-07 6.5E-12 87.6 8.2 62 574-642 1-62 (139)
135 TIGR00215 lpxB lipid-A-disacch 98.5 2.2E-05 4.7E-10 90.4 24.2 135 343-509 190-348 (385)
136 PF03332 PMM: Eukaryotic phosp 98.4 9E-07 2E-11 91.9 9.9 172 608-791 1-198 (220)
137 PF13524 Glyco_trans_1_2: Glyc 98.4 1.8E-06 3.8E-11 78.4 9.7 88 443-537 1-91 (92)
138 KOG3189 Phosphomannomutase [Li 98.4 7.9E-06 1.7E-10 82.5 14.8 184 566-779 5-214 (252)
139 TIGR02919 accessory Sec system 98.2 0.00014 3.1E-09 84.7 23.0 121 360-510 291-413 (438)
140 smart00775 LNS2 LNS2 domain. T 98.2 2.6E-06 5.7E-11 85.6 6.3 77 574-654 1-88 (157)
141 TIGR01670 YrbI-phosphatas 3-de 98.2 9.7E-06 2.1E-10 81.2 10.0 38 749-793 76-113 (154)
142 PRK09484 3-deoxy-D-manno-octul 98.1 8.9E-06 1.9E-10 83.9 7.9 37 750-793 97-133 (183)
143 TIGR01689 EcbF-BcbF capsule bi 97.9 1.9E-05 4.1E-10 76.2 6.5 53 573-634 2-54 (126)
144 COG1519 KdtA 3-deoxy-D-manno-o 97.9 0.0068 1.5E-07 69.0 27.5 221 258-527 166-404 (419)
145 PRK11133 serB phosphoserine ph 97.8 6.6E-06 1.4E-10 92.1 1.6 40 747-793 246-285 (322)
146 TIGR01684 viral_ppase viral ph 97.7 8.4E-05 1.8E-09 80.9 7.4 72 570-654 124-200 (301)
147 COG0560 SerB Phosphoserine pho 97.7 0.00029 6.3E-09 74.4 11.1 44 743-793 138-181 (212)
148 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.5 0.00036 7.7E-09 75.6 9.3 64 573-652 2-73 (249)
149 PLN02954 phosphoserine phospha 97.4 0.0024 5.2E-08 67.5 13.6 36 746-790 152-187 (224)
150 TIGR02726 phenyl_P_delta pheny 97.3 0.00085 1.8E-08 68.3 8.2 64 572-640 7-70 (169)
151 PHA03398 viral phosphatase sup 97.3 0.0006 1.3E-08 74.4 7.3 71 571-654 127-202 (303)
152 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.0011 2.3E-08 64.2 4.7 64 573-643 1-72 (132)
153 TIGR00338 serB phosphoserine p 96.9 0.0079 1.7E-07 63.3 11.5 38 749-793 152-189 (219)
154 KOG2941 Beta-1,4-mannosyltrans 96.6 0.1 2.2E-06 57.8 17.1 169 343-538 254-434 (444)
155 TIGR01681 HAD-SF-IIIC HAD-supe 96.5 0.0042 9.1E-08 60.2 5.7 65 573-640 1-66 (128)
156 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.5 0.0022 4.7E-08 69.8 3.8 53 573-637 2-54 (257)
157 PRK10444 UMP phosphatase; Prov 96.4 0.003 6.4E-08 68.5 4.0 53 573-641 2-54 (248)
158 PRK13288 pyrophosphatase PpaX; 96.3 0.013 2.8E-07 61.6 8.4 38 749-793 139-176 (214)
159 PLN02645 phosphoglycolate phos 96.2 0.0042 9.1E-08 69.5 4.0 55 571-641 27-81 (311)
160 TIGR01672 AphA HAD superfamily 96.1 0.013 2.7E-07 63.0 7.1 83 559-642 50-156 (237)
161 TIGR01452 PGP_euk phosphoglyco 96.1 0.0049 1.1E-07 67.9 4.0 50 572-637 2-51 (279)
162 PRK13223 phosphoglycolate phos 96.1 0.047 1E-06 60.0 11.6 40 746-792 155-194 (272)
163 PF02684 LpxB: Lipid-A-disacch 96.0 0.69 1.5E-05 53.1 21.0 234 211-510 81-342 (373)
164 PF08323 Glyco_transf_5: Starc 95.8 0.043 9.3E-07 59.3 9.6 94 192-285 113-232 (245)
165 TIGR01664 DNA-3'-Pase DNA 3'-p 95.7 0.014 3.1E-07 59.2 5.3 56 571-631 12-69 (166)
166 COG2179 Predicted hydrolase of 95.6 0.043 9.3E-07 55.0 7.7 69 565-647 21-89 (175)
167 COG1778 Low specificity phosph 95.4 0.026 5.6E-07 55.8 5.6 69 570-643 6-74 (170)
168 TIGR01668 YqeG_hyp_ppase HAD s 95.4 0.049 1.1E-06 55.4 7.9 61 569-643 22-83 (170)
169 TIGR01656 Histidinol-ppas hist 95.4 0.023 5E-07 56.3 5.2 53 573-630 1-53 (147)
170 TIGR00213 GmhB_yaeD D,D-heptos 95.3 0.017 3.7E-07 59.0 4.0 52 573-631 2-53 (176)
171 PF07429 Glyco_transf_56: 4-al 94.9 3.2 6.9E-05 46.8 20.5 168 308-508 161-333 (360)
172 PRK11009 aphA acid phosphatase 94.8 0.067 1.5E-06 57.5 7.1 70 559-630 50-140 (237)
173 PF13439 Glyco_transf_4: Glyco 94.8 0.077 1.7E-06 52.4 7.2 92 212-322 80-177 (177)
174 COG0546 Gph Predicted phosphat 94.8 0.19 4E-06 53.3 10.4 35 751-792 148-182 (220)
175 KOG1050 Trehalose-6-phosphate 94.7 0.0018 3.9E-08 79.3 -5.6 220 556-794 173-425 (732)
176 COG0763 LpxB Lipid A disacchar 94.6 2.1 4.4E-05 48.8 18.3 250 211-527 84-365 (381)
177 PRK10826 2-deoxyglucose-6-phos 94.3 0.14 3E-06 54.1 8.0 38 749-793 149-186 (222)
178 PF13844 Glyco_transf_41: Glyc 94.3 1.6 3.4E-05 51.5 17.2 172 343-543 284-467 (468)
179 TIGR01261 hisB_Nterm histidino 94.2 0.063 1.4E-06 54.3 4.9 53 573-629 2-54 (161)
180 PF02350 Epimerase_2: UDP-N-ac 94.0 11 0.00024 42.9 23.3 243 212-508 67-318 (346)
181 PF13344 Hydrolase_6: Haloacid 94.0 0.051 1.1E-06 50.5 3.4 54 575-644 1-57 (101)
182 PF08645 PNK3P: Polynucleotide 94.0 0.052 1.1E-06 54.8 3.8 54 573-629 1-54 (159)
183 PF09419 PGP_phosphatase: Mito 93.9 0.14 3.1E-06 52.0 6.7 65 567-644 36-108 (168)
184 PRK08942 D,D-heptose 1,7-bisph 93.8 0.092 2E-06 53.8 5.4 53 572-630 3-55 (181)
185 PHA02530 pseT polynucleotide k 93.6 0.12 2.5E-06 57.3 6.2 68 571-641 157-224 (300)
186 TIGR03568 NeuC_NnaA UDP-N-acet 93.6 6.1 0.00013 45.3 20.3 73 422-507 264-338 (365)
187 PRK05446 imidazole glycerol-ph 93.5 0.11 2.4E-06 59.0 5.8 55 571-629 1-55 (354)
188 PTZ00445 p36-lilke protein; Pr 93.3 0.22 4.7E-06 52.2 7.1 70 559-632 30-103 (219)
189 PF12710 HAD: haloacid dehalog 93.3 0.22 4.7E-06 50.8 7.2 37 606-643 92-128 (192)
190 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.3 0.12 2.6E-06 55.6 5.5 56 571-642 7-64 (242)
191 PF13579 Glyco_trans_4_4: Glyc 93.0 0.2 4.2E-06 48.6 6.1 84 211-315 72-160 (160)
192 PRK14986 glycogen phosphorylas 92.9 5.7 0.00012 49.7 19.5 150 343-500 542-702 (815)
193 PRK06769 hypothetical protein; 92.9 0.11 2.4E-06 53.0 4.3 53 570-630 2-54 (173)
194 TIGR01525 ATPase-IB_hvy heavy 92.8 0.63 1.4E-05 56.5 11.2 67 565-643 357-424 (556)
195 TIGR01460 HAD-SF-IIA Haloacid 92.8 0.14 3.1E-06 54.9 5.0 50 575-640 1-53 (236)
196 TIGR03492 conserved hypothetic 92.7 3.9 8.5E-05 47.5 17.0 141 346-509 209-365 (396)
197 cd03784 GT1_Gtf_like This fami 92.3 22 0.00048 40.7 22.8 72 425-507 292-371 (401)
198 TIGR01663 PNK-3'Pase polynucle 92.3 0.21 4.6E-06 59.6 6.1 67 570-643 166-248 (526)
199 TIGR01488 HAD-SF-IB Haloacid D 92.2 0.1 2.2E-06 52.7 2.9 41 744-791 137-177 (177)
200 PRK13582 thrH phosphoserine ph 92.0 0.25 5.4E-06 51.3 5.5 36 604-641 69-104 (205)
201 smart00577 CPDc catalytic doma 91.8 0.34 7.5E-06 48.0 6.1 70 571-642 1-82 (148)
202 PRK13225 phosphoglycolate phos 91.8 0.33 7.2E-06 53.4 6.5 35 751-792 198-232 (273)
203 TIGR01675 plant-AP plant acid 91.8 0.35 7.5E-06 51.7 6.4 69 571-640 76-159 (229)
204 TIGR01685 MDP-1 magnesium-depe 91.7 0.33 7.2E-06 49.7 6.0 70 572-642 2-84 (174)
205 TIGR01491 HAD-SF-IB-PSPlk HAD- 91.7 0.45 9.8E-06 48.9 7.1 38 749-793 147-184 (201)
206 TIGR01533 lipo_e_P4 5'-nucleot 91.6 0.31 6.7E-06 53.3 6.0 73 570-643 73-160 (266)
207 PRK09552 mtnX 2-hydroxy-3-keto 91.2 0.33 7.1E-06 51.3 5.5 38 603-641 74-111 (219)
208 COG0707 MurG UDP-N-acetylgluco 91.2 24 0.00053 40.4 20.9 85 432-525 244-340 (357)
209 TIGR01512 ATPase-IB2_Cd heavy 90.3 1.3 2.8E-05 53.6 10.2 64 568-643 338-402 (536)
210 TIGR01488 HAD-SF-IB Haloacid D 90.3 0.41 8.8E-06 48.3 5.0 40 603-643 73-112 (177)
211 PF03767 Acid_phosphat_B: HAD 90.0 0.034 7.3E-07 59.6 -3.3 85 570-655 70-167 (229)
212 TIGR01680 Veg_Stor_Prot vegeta 89.8 0.39 8.5E-06 52.3 4.6 69 571-640 100-181 (275)
213 COG1778 Low specificity phosph 89.7 0.21 4.6E-06 49.6 2.3 38 749-793 83-120 (170)
214 TIGR03351 PhnX-like phosphonat 89.3 0.58 1.3E-05 49.2 5.5 37 750-793 147-184 (220)
215 TIGR01426 MGT glycosyltransfer 89.2 14 0.00031 42.4 17.3 99 425-536 279-386 (392)
216 PRK01021 lpxB lipid-A-disaccha 89.1 44 0.00096 40.8 21.4 66 435-510 483-573 (608)
217 PLN03243 haloacid dehalogenase 89.1 0.93 2E-05 49.5 7.0 34 752-792 169-202 (260)
218 PF06437 ISN1: IMP-specific 5' 88.8 20 0.00043 40.9 17.0 195 559-779 134-377 (408)
219 PF08235 LNS2: LNS2 (Lipin/Ned 88.4 0.64 1.4E-05 46.7 4.7 62 574-640 1-66 (157)
220 PRK14988 GMP/IMP nucleotidase; 88.1 0.61 1.3E-05 49.6 4.6 30 751-787 152-181 (224)
221 PRK10671 copA copper exporting 87.7 2.9 6.3E-05 53.4 11.2 69 562-642 620-688 (834)
222 TIGR03333 salvage_mtnX 2-hydro 87.0 1.3 2.7E-05 46.7 6.2 39 602-641 69-107 (214)
223 TIGR01489 DKMTPPase-SF 2,3-dik 86.9 1.3 2.8E-05 44.9 6.1 38 745-792 145-182 (188)
224 TIGR01686 FkbH FkbH-like domai 86.7 1.5 3.3E-05 49.3 7.0 64 571-640 2-67 (320)
225 TIGR03590 PseG pseudaminic aci 86.5 4.8 0.00011 44.3 10.7 97 343-474 170-266 (279)
226 PF03031 NIF: NLI interacting 85.5 0.78 1.7E-05 45.8 3.6 67 573-641 1-72 (159)
227 PF12689 Acid_PPase: Acid Phos 85.4 1.5 3.3E-05 44.7 5.5 72 572-644 3-86 (169)
228 TIGR01456 CECR5 HAD-superfamil 85.2 1.5 3.3E-05 49.3 6.1 49 574-638 2-57 (321)
229 TIGR02250 FCP1_euk FCP1-like p 85.1 1.7 3.7E-05 43.7 5.8 72 569-642 3-95 (156)
230 COG0637 Predicted phosphatase/ 85.0 1.6 3.4E-05 46.4 5.8 39 603-642 86-124 (221)
231 PRK02797 4-alpha-L-fucosyltran 84.5 24 0.00052 39.5 14.5 124 343-488 145-270 (322)
232 TIGR01491 HAD-SF-IB-PSPlk HAD- 84.3 0.93 2E-05 46.6 3.6 39 604-643 81-119 (201)
233 PLN02575 haloacid dehalogenase 84.1 1.4 3.1E-05 50.6 5.2 17 570-586 129-145 (381)
234 COG0241 HisB Histidinol phosph 84.0 1 2.2E-05 46.3 3.7 51 572-629 5-56 (181)
235 PF11019 DUF2608: Protein of u 84.0 17 0.00038 39.5 13.3 37 743-786 156-192 (252)
236 TIGR02137 HSK-PSP phosphoserin 83.4 1.6 3.4E-05 45.9 4.8 39 603-643 68-106 (203)
237 COG0647 NagD Predicted sugar p 83.3 1.3 2.8E-05 48.5 4.3 54 571-640 7-63 (269)
238 PRK08238 hypothetical protein; 83.2 2.2 4.8E-05 50.7 6.6 46 604-650 73-120 (479)
239 PRK14089 ipid-A-disaccharide s 82.6 47 0.001 37.9 16.7 32 434-474 229-260 (347)
240 TIGR01490 HAD-SF-IB-hyp1 HAD-s 82.6 1.3 2.7E-05 45.8 3.8 42 745-793 151-192 (202)
241 TIGR01522 ATPase-IIA2_Ca golgi 82.2 15 0.00032 47.4 13.8 70 562-643 493-567 (884)
242 COG4641 Uncharacterized protei 81.6 7.2 0.00016 44.3 9.4 116 422-542 239-361 (373)
243 PLN02940 riboflavin kinase 81.5 2.2 4.7E-05 49.4 5.5 36 603-639 93-128 (382)
244 TIGR02245 HAD_IIID1 HAD-superf 80.8 3 6.5E-05 43.6 5.7 62 570-641 19-81 (195)
245 PRK13222 phosphoglycolate phos 80.7 3.5 7.6E-05 43.2 6.4 37 750-793 151-187 (226)
246 PF06941 NT5C: 5' nucleotidase 80.5 2.3 5.1E-05 43.9 4.8 30 602-632 72-101 (191)
247 TIGR02251 HIF-SF_euk Dullard-l 80.3 3.3 7.1E-05 41.8 5.7 69 572-642 1-79 (162)
248 PRK10725 fructose-1-P/6-phosph 79.5 1.1 2.4E-05 45.6 2.1 37 749-792 143-179 (188)
249 PRK13226 phosphoglycolate phos 77.6 5.5 0.00012 42.3 6.7 37 750-793 153-189 (229)
250 PRK13225 phosphoglycolate phos 75.9 6.5 0.00014 43.3 6.8 21 885-905 251-271 (273)
251 PRK11587 putative phosphatase; 75.7 1.6 3.5E-05 45.9 2.0 36 750-792 140-175 (218)
252 COG4087 Soluble P-type ATPase 74.9 6 0.00013 38.4 5.3 23 769-792 91-113 (152)
253 PLN02779 haloacid dehalogenase 74.4 1.9 4.2E-05 47.7 2.2 36 750-792 204-239 (286)
254 TIGR02252 DREG-2 REG-2-like, H 73.5 2.1 4.6E-05 44.3 2.2 35 751-792 163-198 (203)
255 PLN02770 haloacid dehalogenase 73.5 2 4.3E-05 46.4 2.1 35 750-791 166-200 (248)
256 TIGR01454 AHBA_synth_RP 3-amin 73.5 7.3 0.00016 40.4 6.3 36 750-792 133-168 (205)
257 TIGR01548 HAD-SF-IA-hyp1 haloa 73.0 1.7 3.7E-05 45.0 1.3 31 750-787 163-193 (197)
258 PRK11590 hypothetical protein; 72.6 2 4.3E-05 45.2 1.7 38 746-793 160-197 (211)
259 PHA02597 30.2 hypothetical pro 72.4 1.8 3.9E-05 44.6 1.4 33 750-791 132-164 (197)
260 PF00343 Phosphorylase: Carboh 72.3 1.8E+02 0.0039 36.4 18.3 149 343-500 443-603 (713)
261 PF00702 Hydrolase: haloacid d 72.1 4.1 8.8E-05 42.0 3.9 33 753-792 183-215 (215)
262 TIGR01422 phosphonatase phosph 71.9 2.7 5.9E-05 45.2 2.7 31 571-614 1-31 (253)
263 TIGR01449 PGP_bact 2-phosphogl 71.5 6.3 0.00014 40.9 5.2 37 750-793 143-179 (213)
264 TIGR02009 PGMB-YQAB-SF beta-ph 71.5 2.2 4.7E-05 43.2 1.7 36 750-792 144-179 (185)
265 PRK10422 lipopolysaccharide co 70.9 1.9E+02 0.0041 32.7 19.0 87 343-448 183-270 (352)
266 PF12000 Glyco_trans_4_3: Gkyc 70.7 19 0.0004 36.9 8.2 48 192-241 43-93 (171)
267 KOG0210 P-type ATPase [Inorgan 70.2 13 0.00029 45.1 7.8 145 603-793 658-802 (1051)
268 PRK10748 flavin mononucleotide 70.0 2.8 6.1E-05 44.9 2.2 36 750-792 165-201 (238)
269 PF06888 Put_Phosphatase: Puta 68.4 9.8 0.00021 40.9 5.9 46 743-792 144-189 (234)
270 TIGR02253 CTE7 HAD superfamily 68.3 5.2 0.00011 41.8 3.8 37 750-793 152-189 (221)
271 PRK13582 thrH phosphoserine ph 68.1 7.9 0.00017 40.0 5.1 21 771-792 144-164 (205)
272 COG3914 Spy Predicted O-linked 68.1 1.9E+02 0.004 35.2 16.4 109 345-477 431-539 (620)
273 TIGR01652 ATPase-Plipid phosph 67.9 31 0.00068 45.4 11.5 44 604-650 632-675 (1057)
274 KOG0206 P-type ATPase [General 67.5 30 0.00066 45.2 10.8 46 738-793 770-815 (1151)
275 TIGR01116 ATPase-IIA1_Ca sarco 67.2 32 0.0007 44.5 11.2 40 603-643 537-576 (917)
276 PF05152 DUF705: Protein of un 66.9 20 0.00043 39.4 7.8 62 570-643 120-181 (297)
277 COG0816 Predicted endonuclease 65.9 27 0.00059 34.6 7.9 72 361-442 40-111 (141)
278 COG4030 Uncharacterized protei 65.7 6.3 0.00014 41.6 3.6 51 602-654 82-132 (315)
279 PRK13226 phosphoglycolate phos 65.7 3.1 6.8E-05 44.2 1.5 17 886-902 209-225 (229)
280 TIGR02254 YjjG/YfnB HAD superf 65.4 3.9 8.5E-05 42.7 2.2 36 750-792 154-191 (224)
281 PRK13478 phosphonoacetaldehyde 65.3 3.3 7.2E-05 45.1 1.6 37 750-792 160-196 (267)
282 COG0381 WecB UDP-N-acetylgluco 65.1 2.7E+02 0.0058 32.3 21.7 135 345-510 206-343 (383)
283 PF06888 Put_Phosphatase: Puta 64.9 7.2 0.00016 42.0 4.0 38 604-641 72-110 (234)
284 PRK10563 6-phosphogluconate ph 64.0 4.1 8.8E-05 42.8 1.9 36 750-792 144-179 (221)
285 COG4359 Uncharacterized conser 63.6 12 0.00025 38.6 4.9 39 602-641 72-110 (220)
286 TIGR01993 Pyr-5-nucltdase pyri 62.0 4.6 9.9E-05 41.1 1.8 35 750-791 143-177 (184)
287 TIGR01517 ATPase-IIB_Ca plasma 61.9 47 0.001 43.2 11.3 39 603-642 579-617 (941)
288 COG0058 GlgP Glucan phosphoryl 61.9 2.9E+02 0.0062 34.9 17.2 137 343-492 486-630 (750)
289 PRK09449 dUMP phosphatase; Pro 59.6 4.7 0.0001 42.3 1.5 36 751-792 153-189 (224)
290 cd04300 GT1_Glycogen_Phosphory 59.3 2.6E+02 0.0055 35.6 16.4 150 343-500 529-689 (797)
291 TIGR01990 bPGM beta-phosphoglu 59.0 4.4 9.5E-05 41.0 1.1 13 574-586 1-13 (185)
292 TIGR01544 HAD-SF-IE haloacid d 58.7 34 0.00075 37.8 8.0 41 601-642 119-159 (277)
293 TIGR03333 salvage_mtnX 2-hydro 57.7 11 0.00023 39.7 3.7 36 747-793 142-177 (214)
294 TIGR01545 YfhB_g-proteo haloac 57.0 5.9 0.00013 41.8 1.6 38 746-793 159-196 (210)
295 TIGR01489 DKMTPPase-SF 2,3-dik 56.5 13 0.00027 37.6 4.0 38 604-642 73-110 (188)
296 TIGR01493 HAD-SF-IA-v2 Haloaci 55.8 5.2 0.00011 40.2 1.0 30 751-787 142-171 (175)
297 PLN03190 aminophospholipid tra 54.8 1.1E+02 0.0024 40.7 13.0 45 603-650 726-770 (1178)
298 COG1168 MalY Bifunctional PLP- 54.5 4E+02 0.0086 30.8 16.3 191 379-631 158-354 (388)
299 PF13477 Glyco_trans_4_2: Glyc 53.8 60 0.0013 30.8 8.1 34 212-245 74-108 (139)
300 TIGR02137 HSK-PSP phosphoserin 52.9 21 0.00045 37.5 5.0 37 746-793 129-165 (203)
301 PRK14985 maltodextrin phosphor 52.9 1.9E+02 0.0042 36.6 13.8 150 343-500 528-688 (798)
302 KOG3120 Predicted haloacid deh 52.9 28 0.0006 37.0 5.6 48 742-793 156-203 (256)
303 TIGR02247 HAD-1A3-hyp Epoxide 52.7 7.6 0.00016 40.4 1.7 34 751-791 155-188 (211)
304 KOG2116 Protein involved in pl 52.4 17 0.00037 43.9 4.6 82 570-656 528-614 (738)
305 COG3660 Predicted nucleoside-d 51.8 1.4E+02 0.003 32.8 10.7 203 212-479 70-276 (329)
306 COG4087 Soluble P-type ATPase 51.6 14 0.00031 35.9 3.1 51 575-642 17-67 (152)
307 PRK13478 phosphonoacetaldehyde 48.8 42 0.00091 36.5 6.8 22 885-906 238-259 (267)
308 COG1819 Glycosyl transferases, 48.2 2.6E+02 0.0055 32.7 13.4 92 425-529 288-387 (406)
309 TIGR01494 ATPase_P-type ATPase 47.8 68 0.0015 38.4 8.9 64 567-642 322-385 (499)
310 TIGR01511 ATPase-IB1_Cu copper 47.4 40 0.00087 41.1 6.9 33 749-792 454-486 (562)
311 PF13242 Hydrolase_like: HAD-h 46.8 27 0.00059 30.1 4.0 34 753-793 9-43 (75)
312 PRK08942 D,D-heptose 1,7-bisph 46.5 53 0.0012 33.3 6.7 35 751-792 106-140 (181)
313 COG5083 SMP2 Uncharacterized p 46.0 12 0.00026 43.1 1.9 78 569-654 372-451 (580)
314 TIGR00661 MJ1255 conserved hyp 45.6 64 0.0014 36.1 7.7 73 427-509 235-315 (321)
315 PRK06769 hypothetical protein; 45.4 35 0.00076 34.7 5.1 36 750-792 95-130 (173)
316 COG3882 FkbH Predicted enzyme 45.0 47 0.001 39.2 6.4 83 559-642 209-293 (574)
317 PRK05632 phosphate acetyltrans 44.7 2.1E+02 0.0045 36.0 12.6 194 426-656 231-434 (684)
318 TIGR02093 P_ylase glycogen/sta 44.6 3.8E+02 0.0082 34.1 14.5 150 343-500 526-686 (794)
319 PF12710 HAD: haloacid dehalog 44.5 11 0.00025 38.0 1.4 33 749-789 157-192 (192)
320 PRK04128 1-(5-phosphoribosyl)- 43.4 67 0.0015 34.4 7.1 62 559-639 31-93 (228)
321 COG1011 Predicted hydrolase (H 42.6 14 0.00031 38.5 1.9 34 752-791 158-191 (229)
322 PF13528 Glyco_trans_1_3: Glyc 41.9 2.4E+02 0.0051 31.0 11.6 68 429-504 239-316 (318)
323 TIGR01511 ATPase-IB1_Cu copper 41.7 39 0.00084 41.2 5.6 63 569-643 382-444 (562)
324 PRK09456 ?-D-glucose-1-phospha 41.0 15 0.00033 37.9 1.7 14 573-586 1-14 (199)
325 PF06258 Mito_fiss_Elm1: Mitoc 40.5 5E+02 0.011 29.2 13.8 32 430-464 218-249 (311)
326 KOG2134 Polynucleotide kinase 40.2 25 0.00055 40.2 3.3 53 570-628 73-128 (422)
327 COG4996 Predicted phosphatase 40.2 39 0.00085 33.0 4.1 15 573-587 1-15 (164)
328 KOG3742 Glycogen synthase [Car 40.0 43 0.00094 38.9 5.1 71 433-507 493-577 (692)
329 PRK09552 mtnX 2-hydroxy-3-keto 39.2 23 0.00051 37.2 2.8 35 748-793 147-181 (219)
330 TIGR01523 ATPase-IID_K-Na pota 38.9 1.2E+02 0.0025 40.1 9.5 40 603-643 646-685 (1053)
331 COG4567 Response regulator con 38.6 80 0.0017 31.8 6.0 76 430-505 41-124 (182)
332 TIGR02254 YjjG/YfnB HAD superf 36.5 69 0.0015 33.2 5.9 15 572-586 1-15 (224)
333 PRK11033 zntA zinc/cadmium/mer 36.2 65 0.0014 40.7 6.5 68 564-643 540-607 (741)
334 COG3700 AphA Acid phosphatase 35.8 48 0.001 34.0 4.1 81 559-641 50-151 (237)
335 PF15024 Glyco_transf_18: Glyc 35.3 1.3E+02 0.0029 36.3 8.4 78 426-509 327-431 (559)
336 PRK05282 (alpha)-aspartyl dipe 34.9 3.8E+02 0.0082 28.9 11.1 112 345-480 3-124 (233)
337 PLN03007 UDP-glucosyltransfera 34.4 7.9E+02 0.017 29.3 15.0 75 425-509 349-441 (482)
338 KOG3120 Predicted haloacid deh 33.7 35 0.00076 36.2 2.9 19 569-587 10-28 (256)
339 TIGR01497 kdpB K+-transporting 33.7 65 0.0014 40.2 5.8 72 560-643 414-485 (675)
340 PLN02575 haloacid dehalogenase 33.6 1.2E+02 0.0025 35.3 7.4 36 604-640 217-252 (381)
341 PF13419 HAD_2: Haloacid dehal 32.7 39 0.00086 32.9 3.1 41 602-643 76-116 (176)
342 TIGR01545 YfhB_g-proteo haloac 32.4 50 0.0011 34.8 4.0 16 571-586 4-19 (210)
343 TIGR00250 RNAse_H_YqgF RNAse H 32.3 1.8E+02 0.0039 28.3 7.5 71 361-441 35-105 (130)
344 PF09949 DUF2183: Uncharacteri 32.3 1E+02 0.0022 28.7 5.5 35 360-398 49-83 (100)
345 PRK11590 hypothetical protein; 32.2 65 0.0014 33.7 4.8 15 571-585 5-19 (211)
346 PRK12446 undecaprenyldiphospho 31.6 6.9E+02 0.015 28.4 13.4 70 432-509 244-326 (352)
347 KOG2884 26S proteasome regulat 31.1 4.8E+02 0.01 27.9 10.5 38 469-506 186-227 (259)
348 PF12038 DUF3524: Domain of un 30.9 1.4E+02 0.003 30.5 6.5 30 263-292 114-143 (168)
349 PLN02645 phosphoglycolate phos 30.0 1.3E+02 0.0029 33.5 7.1 36 750-792 232-268 (311)
350 PRK06698 bifunctional 5'-methy 29.7 1.2E+02 0.0025 36.0 6.9 35 750-793 387-421 (459)
351 COG0474 MgtA Cation transport 29.3 1.9E+02 0.0042 37.5 9.2 38 604-642 548-585 (917)
352 PRK09449 dUMP phosphatase; Pro 29.0 1.8E+02 0.0038 30.4 7.5 17 886-902 207-223 (224)
353 KOG1615 Phosphoserine phosphat 29.0 39 0.00085 35.2 2.3 39 746-793 156-194 (227)
354 KOG1618 Predicted phosphatase 28.4 45 0.00097 37.3 2.8 35 572-621 35-69 (389)
355 PRK14988 GMP/IMP nucleotidase; 28.3 1.2E+02 0.0026 32.1 6.1 16 571-586 9-24 (224)
356 PF10933 DUF2827: Protein of u 28.2 7.1E+02 0.015 28.7 12.1 144 356-526 202-347 (364)
357 TIGR01454 AHBA_synth_RP 3-amin 28.2 67 0.0014 33.1 4.0 40 603-643 75-114 (205)
358 COG2503 Predicted secreted aci 27.4 65 0.0014 34.8 3.7 68 570-641 77-160 (274)
359 PF10307 DUF2410: Hypothetical 27.2 1.1E+02 0.0024 32.1 5.3 74 604-684 55-131 (197)
360 TIGR01449 PGP_bact 2-phosphogl 27.1 70 0.0015 33.0 4.0 40 603-643 85-124 (213)
361 PF11440 AGT: DNA alpha-glucos 27.1 8.9E+02 0.019 27.1 12.0 262 204-507 53-352 (355)
362 PRK00109 Holliday junction res 27.0 2.5E+02 0.0054 27.6 7.6 70 362-441 42-111 (138)
363 TIGR03351 PhnX-like phosphonat 27.0 1.4E+02 0.0031 31.0 6.3 14 573-586 2-15 (220)
364 PRK10840 transcriptional regul 27.0 3.8E+02 0.0082 27.6 9.5 78 430-507 37-125 (216)
365 PLN02919 haloacid dehalogenase 26.9 32 0.00069 45.3 1.6 31 571-615 74-104 (1057)
366 TIGR01662 HAD-SF-IIIA HAD-supe 26.8 72 0.0016 30.4 3.7 37 749-792 86-124 (132)
367 TIGR02193 heptsyl_trn_I lipopo 26.8 8.8E+02 0.019 26.7 13.7 24 425-448 239-262 (319)
368 TIGR01261 hisB_Nterm histidino 26.7 49 0.0011 33.4 2.6 37 750-793 105-141 (161)
369 COG2248 Predicted hydrolase (m 26.5 8E+02 0.017 27.0 11.4 21 203-223 56-76 (304)
370 KOG2882 p-Nitrophenyl phosphat 26.3 76 0.0016 35.3 4.1 55 571-641 21-75 (306)
371 PHA03392 egt ecdysteroid UDP-g 25.4 1E+03 0.022 28.6 13.9 76 425-509 350-433 (507)
372 TIGR00213 GmhB_yaeD D,D-heptos 25.0 1.2E+02 0.0026 30.7 5.1 36 750-792 108-143 (176)
373 PRK14057 epimerase; Provisiona 25.0 4.7E+02 0.01 28.6 9.8 67 379-449 156-223 (254)
374 TIGR01544 HAD-SF-IE haloacid d 24.7 71 0.0015 35.4 3.5 61 572-633 22-85 (277)
375 PRK13587 1-(5-phosphoribosyl)- 24.3 1.7E+02 0.0036 31.5 6.3 60 558-639 148-212 (234)
376 PF12689 Acid_PPase: Acid Phos 24.2 1.9E+02 0.004 29.6 6.2 91 674-786 48-139 (169)
377 PRK11587 putative phosphatase; 24.2 1.8E+02 0.0039 30.4 6.4 16 571-586 2-17 (218)
378 PRK13396 3-deoxy-7-phosphohept 23.8 8.5E+02 0.018 28.0 12.0 49 425-477 169-217 (352)
379 PF13419 HAD_2: Haloacid dehal 23.3 68 0.0015 31.2 2.9 37 749-792 134-170 (176)
380 TIGR01656 Histidinol-ppas hist 23.1 64 0.0014 31.6 2.7 36 749-791 102-137 (147)
381 PRK01122 potassium-transportin 23.1 1.4E+02 0.003 37.4 6.0 71 561-643 414-484 (679)
382 PRK10826 2-deoxyglucose-6-phos 23.1 95 0.002 32.5 4.1 39 603-642 92-130 (222)
383 TIGR01458 HAD-SF-IIA-hyp3 HAD- 23.1 2.4E+02 0.0052 30.6 7.3 36 750-792 181-217 (257)
384 PRK13288 pyrophosphatase PpaX; 23.0 96 0.0021 32.2 4.1 40 603-643 82-121 (214)
385 KOG4549 Magnesium-dependent ph 22.9 1.3E+02 0.0028 29.4 4.4 64 572-641 18-82 (144)
386 KOG1615 Phosphoserine phosphat 22.9 1.1E+02 0.0025 31.9 4.3 43 602-645 87-129 (227)
387 TIGR01548 HAD-SF-IA-hyp1 haloa 22.8 1E+02 0.0022 31.7 4.2 36 607-643 110-145 (197)
388 PRK09722 allulose-6-phosphate 22.7 5.8E+02 0.013 27.4 9.9 66 379-448 132-198 (229)
389 TIGR01549 HAD-SF-IA-v1 haloaci 22.2 85 0.0018 30.5 3.3 33 750-790 120-152 (154)
390 TIGR01106 ATPase-IIC_X-K sodiu 22.0 1.6E+02 0.0035 38.6 6.7 39 603-642 568-606 (997)
391 COG0546 Gph Predicted phosphat 21.4 1.1E+02 0.0023 32.3 4.1 38 604-642 90-127 (220)
392 PRK08091 ribulose-phosphate 3- 21.2 6.1E+02 0.013 27.3 9.6 67 379-449 142-209 (228)
393 KOG0331 ATP-dependent RNA heli 20.7 4.5E+02 0.0098 31.8 9.3 102 345-463 129-232 (519)
394 TIGR02253 CTE7 HAD superfamily 20.6 1.1E+02 0.0024 31.7 4.0 40 603-643 94-133 (221)
395 PRK13222 phosphoglycolate phos 20.5 1.2E+02 0.0025 31.6 4.1 40 603-643 93-132 (226)
396 cd04248 AAK_AK-Ectoine AAK_AK- 20.5 6.5E+02 0.014 28.3 10.0 50 564-629 149-198 (304)
397 PF06258 Mito_fiss_Elm1: Mitoc 20.1 1.3E+03 0.027 26.0 19.1 85 378-476 146-237 (311)
398 PLN00414 glycosyltransferase f 20.0 3.6E+02 0.0078 32.0 8.4 109 426-543 317-441 (446)
No 1
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=7.3e-187 Score=1679.88 Aligned_cols=906 Identities=82% Similarity=1.273 Sum_probs=838.9
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccchhhhhccCCCCCCCccccccCCCCC--
Q 002468 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (918)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (918)
||||+|+|++...+++|++||+|+ ||||+.+++++.++..+ +.+.++.++++...|.++.++..+++.++|.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999988889999999999 99999999998776666 888899999999999999999999999999844
Q ss_pred CCCCCccccCCCCCCCCcEEEEEccCccccccc------------c-------cccCCcEEEEeCCCCCCCchhhHHHHH
Q 002468 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRR------------G-------VKEFEARWIGWAGVNVPDEIGQKALTK 138 (918)
Q Consensus 78 ~~~~~~~~~~~~~~~~~rlivvsnrlP~~~~~~------------~-------l~~~~~~Wvgw~g~~~~~~~~~~~~~~ 138 (918)
...+||++++++..-++||||||||||+++++. | ++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 367899999986544789999999999987542 1 356789999999987776555666777
Q ss_pred hhcCccEEEEecChHhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEE
Q 002468 139 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 218 (918)
Q Consensus 139 ~~~~~~~~pV~l~~~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwv 218 (918)
.+.+|+|+||||+++++++||+||||++|||+|||++..++++.+..+.++.+|++|++||++||++|+++++++|+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 78899999999999999999999999999999999865544443333334456999999999999999999999999999
Q ss_pred eCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCC
Q 002468 219 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 298 (918)
Q Consensus 219 HDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~ 298 (918)
||||||+||++||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccC
Q 002468 299 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 378 (918)
Q Consensus 299 ~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~ 378 (918)
+++++||.++|.++|+|||++.|...+..+++++++++++++++++++||+|||||+.|||+++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHH
Q 002468 379 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 458 (918)
Q Consensus 379 kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~l 458 (918)
+|+||||++|+|+++++|++|++++.++|++||++||+.+|+||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 002468 459 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 459 EamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
||||||.+++|+||+|||+|++++||.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+++|++.|+.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999999999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcC
Q 002468 539 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 618 (918)
Q Consensus 539 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d 618 (918)
+|.++..++..+..++.+.|+.+.++++|+++++++|||||||||++++++|..+.+++.++.+.++++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998776666666667889999999999999999999999999999999996556666666788999999999999999
Q ss_pred CCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccce
Q 002468 619 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 698 (918)
Q Consensus 619 ~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~s 698 (918)
++|.|+|+|||++++|++||+.++++++|+||++++..++.|...+++..+..|++.+..+|++|++++||++||+|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999987889985443555779999999999999999999999999999
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEe
Q 002468 699 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 699 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiG 778 (918)
++||||.+||+++..|+++++++|+...+.+.+++|+.|+++|||+|.|+|||.|+++||+++..++.+..++|||+|+|
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999965566667899999999999999999999999999998753332224689999999
Q ss_pred cCCCC-cHHHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhh-hccCCcccccCCCCCCCCCCCCCCCCC--CCCC
Q 002468 779 HFLGK-DEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV-ASRGSSKISQGKTQRPAQAPEKKTPNH--NCTN 854 (918)
Q Consensus 779 D~d~n-DedMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 854 (918)
| |.+ |||||+++...+|..+.+++|++..++.++|.++++..+. .++++++++|.++|++.++..++..+| ..|+
T Consensus 798 D-d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (934)
T PLN03064 798 H-FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGS 876 (934)
T ss_pred C-CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCc
Confidence 9 875 9999999999999999999999999999999999998887 779999999999999999999999888 5788
Q ss_pred CCCCCCCccccccccCCCCceEEEEECCCCCccceecCCHHHHHHHHHHHHhhcCc
Q 002468 855 VRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910 (918)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 910 (918)
.+++.++..+|+++|++++|||||+||+|+|+|+|+|++++||+.||+.|+++++.
T Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 877 DRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 88889999999999999999999999999999999999999999999999988754
No 2
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=2.2e-155 Score=1415.09 Aligned_cols=727 Identities=37% Similarity=0.682 Sum_probs=649.9
Q ss_pred CCcEEEEEccCccccccc--c--------------------c--ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEE
Q 002468 93 RQRLLVVANRLPVSAIRR--G--------------------V--KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 148 (918)
Q Consensus 93 ~~rlivvsnrlP~~~~~~--~--------------------l--~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 148 (918)
+.||||||||||+++++. | + ...+++||||+|..++.+++......++.+|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 579999999999988752 1 2 236789999999877654444333556788999999
Q ss_pred ecChHhHHHhHHHHHHHhhHhhhcCCC-CCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCC-CCEEEEeCCccch
Q 002468 149 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 225 (918)
Q Consensus 149 ~l~~~~~~~~y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~-~DiIwvHDyhL~l 225 (918)
||+++++++||+||||++|||+|||+. ..+. ....|++. |++|++||++||++|++++++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999994 3221 11247764 999999999999999999998 6999999999999
Q ss_pred HHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCC----Ccee
Q 002468 226 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 301 (918)
Q Consensus 226 lp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~----~~i~ 301 (918)
+|.+||+++|+++||||||||||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998764 3578
Q ss_pred eCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc--CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCc
Q 002468 302 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 379 (918)
Q Consensus 302 ~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~k 379 (918)
|+||.++|.++|+|||++.|...+..+++.+++++++++++ ++++|++|||||+.|||.++|+||++||++||+|++|
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999996 6999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHH
Q 002468 380 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 459 (918)
Q Consensus 380 v~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lE 459 (918)
|+||||++|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+|+||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC---------------CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 002468 460 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 524 (918)
Q Consensus 460 amA~~~~---------------~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v 524 (918)
|+|||.+ ++|+||+|||+||+++| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999963 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhHHHhh-hcc---------cc-----CCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCC
Q 002468 525 TTHTAQEWAETFVSELNDTVVEAQ-LRI---------KQ-----VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 589 (918)
Q Consensus 525 ~~~~~~~W~~~fl~~l~~~~~~~~-~~~---------~~-----~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~ 589 (918)
.+||+.+|+++||.+|.++++.+. .+. +. .+++|+++.++++|+++++|+|||||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999876531 111 11 15788999999999999999999999999998742
Q ss_pred CCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc-CceEEeeCceEEEecCC-eeeeecccc
Q 002468 590 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 667 (918)
Q Consensus 590 p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l-~l~liaenGa~i~~~~~-~w~~~~~~~ 667 (918)
....++++++++|++|++++++.|+|+|||++..|+++|+.+ ++++||+||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 145788999999999999999999999999999999999987 69999999999996554 786544 33
Q ss_pred CChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCC
Q 002468 668 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 747 (918)
Q Consensus 668 ~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~g 747 (918)
.+..|++.+..+++.|++++||+++|.|+++++||||.+|++++..+++++..++ ...+.+..+.+..|+++|||+|+|
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4568999999999999999999999999999999999999999988999999988 666666678899999999999999
Q ss_pred CCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccC
Q 002468 748 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRG 827 (918)
Q Consensus 748 vnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (918)
+|||.|+++|++.+...+ +++|+++|||| |.|||+||++++....
T Consensus 761 vnKG~Al~~Ll~~~~~~g---~~~d~vl~~GD-D~nDedMF~~~~~~~~------------------------------- 805 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERG---MLPDFVLCIGD-DRSDEDMFEVITSSMA------------------------------- 805 (854)
T ss_pred CCHHHHHHHHHHHHHhcC---CCcccEEEEcC-CccHHHHHHHhhhhcc-------------------------------
Confidence 999999999987643211 56899999999 9999999999963100
Q ss_pred CcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEECCCCCccceecCCHHHHHHHHHHHHhh
Q 002468 828 SSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADA 907 (918)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~ 907 (918)
|..- ....++|||+||.++|.|+|||+|++||++||+.|++.
T Consensus 806 -------------------------g~~~-------------~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~ 847 (854)
T PLN02205 806 -------------------------GPSI-------------APRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASV 847 (854)
T ss_pred -------------------------CCcc-------------cccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhc
Confidence 0000 01136899999999999999999999999999999987
Q ss_pred cCc
Q 002468 908 SSS 910 (918)
Q Consensus 908 ~~~ 910 (918)
+.+
T Consensus 848 ~~~ 850 (854)
T PLN02205 848 SEQ 850 (854)
T ss_pred chh
Confidence 654
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5e-153 Score=1395.87 Aligned_cols=760 Identities=71% Similarity=1.182 Sum_probs=665.1
Q ss_pred CCcEEEEEccCccccccc------------c-------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEEecChH
Q 002468 93 RQRLLVVANRLPVSAIRR------------G-------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 153 (918)
Q Consensus 93 ~~rlivvsnrlP~~~~~~------------~-------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 153 (918)
++||||||||||++++++ | ++..+++||||+|..+++++++..+...+.+++|+|||| ++
T Consensus 10 ~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l-~~ 88 (797)
T PLN03063 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFL-NE 88 (797)
T ss_pred CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEeeh-HH
Confidence 799999999999977642 1 355689999999986655445555667778999999999 99
Q ss_pred hHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhh
Q 002468 154 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 233 (918)
Q Consensus 154 ~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~ 233 (918)
++++||+||||++|||+|||++.++.+..+..+.++..|++|++||++||++|+++++++|+|||||||||+||++||++
T Consensus 89 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~~lR~~ 168 (797)
T PLN03063 89 VFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEY 168 (797)
T ss_pred HHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHHHHHHh
Confidence 99999999999999999999843322221222234556999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEee
Q 002468 234 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 313 (918)
Q Consensus 234 ~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P 313 (918)
.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+++++++....++.++|+.++|.++|
T Consensus 169 ~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP 248 (797)
T PLN03063 169 NNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248 (797)
T ss_pred CCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred CCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCCh
Q 002468 314 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 393 (918)
Q Consensus 314 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~ 393 (918)
+|||++.|.+....+++++....+++.++++++|++|||||+.||++++|+||++|++++|+++++++||||++|+|+++
T Consensus 249 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~ 328 (797)
T PLN03063 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDV 328 (797)
T ss_pred cccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCch
Confidence 99999999988777777777888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEE
Q 002468 394 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 473 (918)
Q Consensus 394 ~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIl 473 (918)
++|++|++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..++|++|+
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVl 408 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVL 408 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred eCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhhhcccc
Q 002468 474 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 553 (918)
Q Consensus 474 Se~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~ 553 (918)
|||+|+++.+|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||++|.+++..+......
T Consensus 409 Se~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~ 488 (797)
T PLN03063 409 SEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488 (797)
T ss_pred eCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccC
Confidence 99999999997799999999999999999999999999999999999999999999999999999999988765555555
Q ss_pred CCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 002468 554 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 633 (918)
Q Consensus 554 ~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 633 (918)
.++.|+.+.++++|++|++++|||||||||++..++|.. .+.+.++++++++|++|+++++|.|+|+|||+++.
T Consensus 489 ~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~------p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~ 562 (797)
T PLN03063 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK------EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI 562 (797)
T ss_pred CCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc------cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH
Confidence 668899999999999999999999999999988654310 04577999999999999999999999999999999
Q ss_pred HHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHH
Q 002468 634 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI 713 (918)
Q Consensus 634 L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~ 713 (918)
|++||+.++++++|+||++++..++.|....++..+..|++.+..+|++|++++||++||+|+++++||||.+||+++..
T Consensus 563 L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~ 642 (797)
T PLN03063 563 LDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRA 642 (797)
T ss_pred HHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHH
Confidence 99999998999999999999977788976543445678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 714 QARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 714 ~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
++++++++|.+..+.+.+++|+.|+++|||+|.|+|||.|+++|++++...+....++|||+|+|| |. +||+||+++.
T Consensus 643 ~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdmF~~l~ 721 (797)
T PLN03063 643 QARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDVYTFFE 721 (797)
T ss_pred HHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHHHHhcc
Confidence 999999998444555668999999999999999999999999999987311111135799999999 74 6999999996
Q ss_pred cCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q 002468 793 PELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNK 872 (918)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (918)
....+. ..+.++. .+..+++.+ .| ....+.
T Consensus 722 ~~~~~~----------------------------~~~~~~~------~~~~~~~~~---------------~~-~~~~~~ 751 (797)
T PLN03063 722 PEILSK----------------------------KKSSSSN------YSDSDKKVS---------------SN-LVDLKG 751 (797)
T ss_pred cccccc----------------------------ccccccc------ccccccccc---------------cc-cccccc
Confidence 421000 0000000 000000000 00 011234
Q ss_pred CceEEEEECCCCCccceecCCHHHHHHHHHHHHhhcCc
Q 002468 873 ENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 910 (918)
Q Consensus 873 ~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 910 (918)
+++|+|+||.++|.|+|||+|++||+++|+.|++..+.
T Consensus 752 ~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 752 ENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred CceEEEEECCCCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 57999999999999999999999999999999986543
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=9.9e-140 Score=1280.95 Aligned_cols=703 Identities=43% Similarity=0.763 Sum_probs=645.0
Q ss_pred CcEEEEEccCccccccc----------c---------cccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCccEEEEecCh
Q 002468 94 QRLLVVANRLPVSAIRR----------G---------VKEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLDE 152 (918)
Q Consensus 94 ~rlivvsnrlP~~~~~~----------~---------l~~~~~~Wvgw~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~~ 152 (918)
+||||||||+|++++++ | ++..+++||||+|...+.. ..+..+...+.+|+|+||||++
T Consensus 1 ~~livvsnr~p~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 80 (726)
T PRK14501 1 SRLIIVSNRLPVTVVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLSA 80 (726)
T ss_pred CCEEEEEcCCCcceeecCCceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCCH
Confidence 48999999999977542 1 3678999999999765542 2233345667899999999999
Q ss_pred HhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHH
Q 002468 153 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 231 (918)
Q Consensus 153 ~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr 231 (918)
+++++||+||||++|||+|||++... .|++. |++|++||++||++|++.++++|+|||||||||++|++||
T Consensus 81 ~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~lr 152 (726)
T PRK14501 81 EEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLR 152 (726)
T ss_pred HHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHHH
Confidence 99999999999999999999996433 36654 9999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEE
Q 002468 232 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 311 (918)
Q Consensus 232 ~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v 311 (918)
++.|+++||||+|+|||++++|++||+|++||+|||+||+|||||++|++||+++|.++++++.....++++|+.++|.+
T Consensus 153 ~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v 232 (726)
T PRK14501 153 ERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDA 232 (726)
T ss_pred hhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999998877778999999999999
Q ss_pred eeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCC
Q 002468 312 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 391 (918)
Q Consensus 312 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~ 391 (918)
+|+|||++.|.+....+++.+..+++|+.++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|+|.
T Consensus 233 ~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~ 312 (726)
T PRK14501 233 FPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRT 312 (726)
T ss_pred EECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCc
Confidence 99999999999988777777788888888889999999999999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceE
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 471 (918)
Q Consensus 392 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~l 471 (918)
++++|++|++++++++++||++||+.+|.||+|+.+.+++++++++|++|||||+||++||||||++||||||.+++|++
T Consensus 313 ~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~ 392 (726)
T PRK14501 313 GVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVL 392 (726)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred EEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhhhcc
Q 002468 472 ILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRI 551 (918)
Q Consensus 472 IlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~ 551 (918)
|+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+|++.|++++++++.+||+.+|+++|++.+.+++..+....
T Consensus 393 vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~ 471 (726)
T PRK14501 393 ILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFA 471 (726)
T ss_pred EEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccc
Confidence 999999999998 6799999999999999999999999999999999999999999999999999999999876543332
Q ss_pred ccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 002468 552 KQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 552 ~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 631 (918)
....+.|+.+.++++|+++++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||++
T Consensus 472 ~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 472 SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 333577899999999999999999999999999987666 45678999999999999989999999999999
Q ss_pred hhHHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhh
Q 002468 632 NVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFG 711 (918)
Q Consensus 632 ~~L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~ 711 (918)
..++++|+.+++++||+||++++..++.|.... ..+..|++.+.++++.+.++++|+++|.|+.+++|||+.++++++
T Consensus 543 ~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~ 620 (726)
T PRK14501 543 DTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELG 620 (726)
T ss_pred HHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHH
Confidence 999999998899999999999997778887544 236789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 712 RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 712 ~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
..+++++.+++ ...+.+..+.++.|+.++||+|+++|||.|++++++. .++++++|||| |.|||+||+++
T Consensus 621 ~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~~ 690 (726)
T PRK14501 621 EARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRAL 690 (726)
T ss_pred HHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHhc
Confidence 88888998888 6666667888999999999999999999999999983 45899999999 99999999987
Q ss_pred CcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCC
Q 002468 792 EPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLN 871 (918)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (918)
..
T Consensus 691 ~~------------------------------------------------------------------------------ 692 (726)
T PRK14501 691 PE------------------------------------------------------------------------------ 692 (726)
T ss_pred cc------------------------------------------------------------------------------
Confidence 32
Q ss_pred CCceEEEEECCCCCccceecCCHHHHHHHHHHHHh
Q 002468 872 KENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLAD 906 (918)
Q Consensus 872 ~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~~L~~ 906 (918)
.+|+|+||.++|.|+|+|++++||..+|+.|++
T Consensus 693 --~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 --TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred --CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 369999999999999999999999999999974
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-118 Score=1060.19 Aligned_cols=703 Identities=46% Similarity=0.810 Sum_probs=646.4
Q ss_pred CCcEEEEEccCccccccc-c--------------------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEEecC
Q 002468 93 RQRLLVVANRLPVSAIRR-G--------------------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 151 (918)
Q Consensus 93 ~~rlivvsnrlP~~~~~~-~--------------------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 151 (918)
+.|+|+||||||+.+.+. + .++.+..||||.|..++++++.......+..++|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 579999999999987321 1 1445689999999888877777777788899999999999
Q ss_pred hHhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHH
Q 002468 152 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 230 (918)
Q Consensus 152 ~~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~l 230 (918)
++....+|++||+++|||+|||+..+.+... . .|.. .|++|+.+|+.||+++++.++++|+|||||||||++|+++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~--~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPAF--K-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchhh--h-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 9999999999999999999999943322211 1 2343 5999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccC----CCceeeCCee
Q 002468 231 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 306 (918)
Q Consensus 231 r~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~----~~~i~~~g~~ 306 (918)
|+...+++||||+|.|||++|+|+++|.|++|+.+|++||+||||+++|++||+++|.|+++++.. ..++.++||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred eEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEE
Q 002468 307 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 386 (918)
Q Consensus 307 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig 386 (918)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+.+++.||++||++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCC
Q 002468 387 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 466 (918)
Q Consensus 387 ~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~ 466 (918)
.|+++++++|++++.++..++.+||++||+..+.||+++...++..++.++|.+||++++++++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002468 467 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 546 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 546 (918)
+.+++|+|+|+|+++.++.++++|||||.+++|.+|..+|+|+.+|+..|+..++.++..|+...|+..|+..+++.+..
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999999988887
Q ss_pred hhhccccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEE
Q 002468 547 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 626 (918)
Q Consensus 547 ~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~Iv 626 (918)
..+. ..+.+.|..+.+++.|++|++|+|++|||||+.+.. | ..+...|+.||+||+|.|+|+
T Consensus 479 ~~~~-~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GFLG-FRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR--S---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cccc-cccccccChhHhhhhhhhccceEEEecccccccCCC--C---------------chHHHHHHHHhcCCCCeEEEE
Confidence 6633 344466899999999999999999999998888652 2 119999999999999999999
Q ss_pred cCCChhhHHHHhccc-CceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeec
Q 002468 627 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 705 (918)
Q Consensus 627 SGR~~~~L~~~~~~l-~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ 705 (918)
|||++..++.|+... ++|++||||++++.+++ |.+.+ .+++|++.+.++|++|++|||||++|.|+.+++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998877 89999999999998766 98766 57899999999999999999999999999999999999
Q ss_pred cChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcH
Q 002468 706 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 785 (918)
Q Consensus 706 ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDe 785 (918)
+|++++..||+++.++| .. .+.++.++.|+..|||+|.|++||.|+.+++..+. .++|+++|+|| |.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67899999999999999999999999999999986 47899999999 99999
Q ss_pred HHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 002468 786 DVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 865 (918)
Q Consensus 786 dMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (918)
+||+++.....+.
T Consensus 687 d~~~~~~~~~~~~------------------------------------------------------------------- 699 (732)
T KOG1050|consen 687 DMFEFISKAKDPE------------------------------------------------------------------- 699 (732)
T ss_pred HHHHHHhhccCCc-------------------------------------------------------------------
Confidence 9999996632100
Q ss_pred ccccCCCCceEEEEECCCCCccceecCCHHHHHHHHH
Q 002468 866 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLK 902 (918)
Q Consensus 866 ~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~eV~~~L~ 902 (918)
+ -++.|+|+||.++|.|+|++.++.||+.+|+
T Consensus 700 ~-----~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 K-----VEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred c-----cceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 0 0368999999999999999999999999885
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=3e-113 Score=976.10 Aligned_cols=440 Identities=35% Similarity=0.629 Sum_probs=406.4
Q ss_pred CcEEEEEccCcccccc----cc--------cccCCcEEEEeCCCCCCCchhhHHHHHh-hcCccEEEEecChHhHHHhHH
Q 002468 94 QRLLVVANRLPVSAIR----RG--------VKEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDEDIVHQYYN 160 (918)
Q Consensus 94 ~rlivvsnrlP~~~~~----~~--------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~~~~~~~y~ 160 (918)
+||||||||+|+.... .| ++..+|+||||+|....++ ..+... ..++.|.||+|+++++++||+
T Consensus 2 ~rLivVSNRlp~~~~~~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~---~~~~~~~~~~~~~~~v~L~~~~~~~yY~ 78 (474)
T PRK10117 2 SRLVVVSNRIAPPDEHKASAGGLAVGILGALKAAGGLWFGWSGETGNED---QPLKKVKKGNITWASFNLSEQDYDEYYN 78 (474)
T ss_pred CCEEEEECCCcCCCCCCcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc---ccchhhhcCCceEEEecCCHHHHHHHHh
Confidence 6899999999975422 12 4778999999999753321 112233 256899999999999999999
Q ss_pred HHHHHhhHhhhcCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeE
Q 002468 161 GYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKV 239 (918)
Q Consensus 161 gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I 239 (918)
||||++|||+|||++... .|+. .|++|++||++||++|++.+++||+|||||||||++|++||+++|+++|
T Consensus 79 gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR~~~~~~~I 150 (474)
T PRK10117 79 QFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRI 150 (474)
T ss_pred hhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHHHhCCCCcE
Confidence 999999999999995432 3665 4999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEEeeCCcCh
Q 002468 240 GWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAFPIGIDS 318 (918)
Q Consensus 240 ~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~-~~i~~~g~~~~v~v~P~GID~ 318 (918)
|||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++... ..+.++|+.++|.++|+|||+
T Consensus 151 gFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~ 230 (474)
T PRK10117 151 GFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEP 230 (474)
T ss_pred EEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcH
Confidence 9999999999999999999999999999999999999999999999999999987643 457788999999999999999
Q ss_pred hhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHH
Q 002468 319 ERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 398 (918)
Q Consensus 319 ~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~ 398 (918)
+.|...+..+ +...++++++.++++++|++||||||+|||+++|+||++||++||+|++||+|+||++|+|+++++|++
T Consensus 231 ~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~ 309 (474)
T PRK10117 231 DEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQD 309 (474)
T ss_pred HHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHH
Confidence 9999887755 466788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcC-CCCceEEEeCCC
Q 002468 399 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGVLILSEFA 477 (918)
Q Consensus 399 l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~-~~~g~lIlSe~a 477 (918)
|+++|+++|++||++||+.+|+||+|+++.+++++|.|||++|||+++||++||||||++||+|||. +++|+||+|||+
T Consensus 310 l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefA 389 (474)
T PRK10117 310 IRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFA 389 (474)
T ss_pred HHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEeccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 788999999999
Q ss_pred CchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002468 478 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 546 (918)
Q Consensus 478 G~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 546 (918)
|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||++|..+...
T Consensus 390 GaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 390 GAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred chHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 999999 78999999999999999999999999999999999999999999999999999999987543
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=1.3e-109 Score=956.42 Aligned_cols=435 Identities=32% Similarity=0.625 Sum_probs=402.1
Q ss_pred EEccCccccccc--c--------------------c-ccCCcEEEEeCCCCCCCchh-hHHHH-HhhcCccEEEEecChH
Q 002468 99 VANRLPVSAIRR--G--------------------V-KEFEARWIGWAGVNVPDEIG-QKALT-KALAEKRCIPVFLDED 153 (918)
Q Consensus 99 vsnrlP~~~~~~--~--------------------l-~~~~~~Wvgw~g~~~~~~~~-~~~~~-~~~~~~~~~pV~l~~~ 153 (918)
||||||++++++ | + +..+|+||||+|...++++. ...+. ....+++|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999887652 1 3 34679999999975322111 11111 2235699999999999
Q ss_pred hHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHh
Q 002468 154 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 232 (918)
Q Consensus 154 ~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~ 232 (918)
++++||+||||++|||+|||++... .|+.. |++|++||++||++|+++++++|+|||||||||++|++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999996433 46654 99999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCC--------------
Q 002468 233 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 298 (918)
Q Consensus 233 ~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~-------------- 298 (918)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 299 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 299 -------~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
++.++||.++|.++|+|||++.|.+....+++.+.++++|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778999999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 451 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~E 451 (918)
+||+++++|+|||||.|+|+++++|++++++++++|++||++||+.+|+||+|+++.++++++.+||++||||++||+||
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 002468 452 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 531 (918)
Q Consensus 452 G~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 531 (918)
|||||++||||||.+++||||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999999889999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002468 532 WAETFVSELND 542 (918)
Q Consensus 532 W~~~fl~~l~~ 542 (918)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998865
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=3.6e-110 Score=963.19 Aligned_cols=443 Identities=54% Similarity=0.944 Sum_probs=342.2
Q ss_pred cEEEEEccCccccccc---c--------------------cccCCcEEEEeCCCCCCCch--hhHHHHHhhcCccEEEEe
Q 002468 95 RLLVVANRLPVSAIRR---G--------------------VKEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 149 (918)
Q Consensus 95 rlivvsnrlP~~~~~~---~--------------------l~~~~~~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 149 (918)
||||||||||++++++ | ++..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 7999999999997653 1 25589999999998766544 222233566899999999
Q ss_pred cChHhHHHhHHHHHHHhhHhhhcCCCC-CcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHH
Q 002468 150 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 227 (918)
Q Consensus 150 l~~~~~~~~y~gf~n~~LWPlfH~~~~-~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp 227 (918)
|+++++++||+||||++|||+|||+.. .+ + ...|+. .|++|++||+.||++|++.+++||+|||||||||+||
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~----~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-D----LARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-c----cchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999999843 11 0 123555 4999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCC--ceeeCCe
Q 002468 228 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 305 (918)
Q Consensus 228 ~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~--~i~~~g~ 305 (918)
++||++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... .++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987655 7999999
Q ss_pred eeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcC-CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEE
Q 002468 306 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 384 (918)
Q Consensus 306 ~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq 384 (918)
.++|.++|+|||++.|...+.++++.++.+++++++++ +++|++|||+|++|||+++|+||++||++||+|+++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhc
Q 002468 385 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464 (918)
Q Consensus 385 ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~ 464 (918)
|+.|+|+++++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 002468 465 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542 (918)
Q Consensus 465 ~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 542 (918)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|++.||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999966789999999999999999999999999999999999999999999999999999874
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-107 Score=918.08 Aligned_cols=444 Identities=50% Similarity=0.890 Sum_probs=410.7
Q ss_pred CCCCCcEEEEEccCccccccc-------------c--------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEE
Q 002468 90 TFSRQRLLVVANRLPVSAIRR-------------G--------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 148 (918)
Q Consensus 90 ~~~~~rlivvsnrlP~~~~~~-------------~--------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 148 (918)
++..+|+||||||+|++..+. | ++..+++||||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 445689999999999986411 1 2667999999999877522223344555568999999
Q ss_pred ecChHhHHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHH
Q 002468 149 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 227 (918)
Q Consensus 149 ~l~~~~~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp 227 (918)
+|+.+++++||++|||++|||+|||+.... .|+++ |+.|++||++||++|++.+++||+||||||||+|+|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995432 46665 999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCcee---eCC
Q 002468 228 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 304 (918)
Q Consensus 228 ~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~---~~g 304 (918)
+|||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+|||||++|++||+++|+++++... ...++ ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~-~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG-DADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccc-cccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998652 22233 447
Q ss_pred eeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcC-CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEE
Q 002468 305 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 383 (918)
Q Consensus 305 ~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lv 383 (918)
+.++|.++|+|||+..|......+.++.++.++++.+.+ +++|++||||||+||++++|+||++||++||+|++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999999888888888999988876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHh
Q 002468 384 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 463 (918)
Q Consensus 384 qig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~ 463 (918)
||+.|||+++++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||++|||+++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 002468 464 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 464 ~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 543 (918)
|.+++|+||+|||+|++.+| .+|++|||||.+++|+||.+||+|+.+||++|++.+++.|.+||+++|+.+|+.+|...
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99889999999999999999 77999999999999999999999999999999999999999999999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=6.7e-102 Score=897.09 Aligned_cols=438 Identities=56% Similarity=0.930 Sum_probs=408.7
Q ss_pred cEEEEEccCccccccc------c---------cccCCcEEEEeCCCCCCCchhhHHH-HHhhcCccEEEEecChHhHHHh
Q 002468 95 RLLVVANRLPVSAIRR------G---------VKEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDEDIVHQY 158 (918)
Q Consensus 95 rlivvsnrlP~~~~~~------~---------l~~~~~~Wvgw~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~~~~~~ 158 (918)
||||||||+|+.+.++ | ++..+++||||+|...++++++..+ .....+++|+||||+++++++|
T Consensus 1 ~livvsnr~p~~~~~~~~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 80 (456)
T TIGR02400 1 RLIVVSNRLPVPITRGGLEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEEDVDGY 80 (456)
T ss_pred CEEEEECCCCccccCCCCCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHHHHHHH
Confidence 6999999999987653 2 3667999999999865533322223 3445789999999999999999
Q ss_pred HHHHHHHhhHhhhcCCCCCcccccccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCC
Q 002468 159 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDM 237 (918)
Q Consensus 159 y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~ 237 (918)
|+||||++|||+|||++... .|+.. |++|++||++||++|.+.++++|+|||||||||++|++||++.|++
T Consensus 81 y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~ 152 (456)
T TIGR02400 81 YNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQN 152 (456)
T ss_pred HHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHhhCCCC
Confidence 99999999999999996432 46654 9999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcC
Q 002468 238 KVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGID 317 (918)
Q Consensus 238 ~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID 317 (918)
+||||+|||||++|+|++||+|++||+|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++|+|||
T Consensus 153 ~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID 232 (456)
T TIGR02400 153 KIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGID 232 (456)
T ss_pred eEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCC
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred hhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHH
Q 002468 318 SERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 397 (918)
Q Consensus 318 ~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~ 397 (918)
++.|.+....+++.+..+.+|++++++++|++||||++.||++.+|+||++|++++|+++++++|+||++|+|+++++|+
T Consensus 233 ~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~ 312 (456)
T TIGR02400 233 VDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQ 312 (456)
T ss_pred HHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHH
Confidence 99999887777788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCC
Q 002468 398 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 477 (918)
Q Consensus 398 ~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a 477 (918)
+|++++++++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+..++|+||+|+++
T Consensus 313 ~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~ 392 (456)
T TIGR02400 313 QLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFA 392 (456)
T ss_pred HHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997667889999999
Q ss_pred CchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 478 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 478 G~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 393 G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 393 GAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred CChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 999999 599999999999999999999999999999999999999999999999999998874
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=2e-91 Score=814.49 Aligned_cols=437 Identities=54% Similarity=0.926 Sum_probs=404.0
Q ss_pred cEEEEEccCcccccccc--------------------cccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEEecChHh
Q 002468 95 RLLVVANRLPVSAIRRG--------------------VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 154 (918)
Q Consensus 95 rlivvsnrlP~~~~~~~--------------------l~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 154 (918)
||||||||+|+++++++ ++..+++||||+|...+.+++.......+.+|+|+||||++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 69999999999887521 3667999999999877654443355667789999999999999
Q ss_pred HHHhHHHHHHHhhHhhhcCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhh
Q 002468 155 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 233 (918)
Q Consensus 155 ~~~~y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~ 233 (918)
++.||+||||++|||+|||++... .|++ .|++|++||+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999995432 3555 4999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEEe
Q 002468 234 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 312 (918)
Q Consensus 234 ~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~-~~i~~~g~~~~v~v~ 312 (918)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987654 678899999999999
Q ss_pred eCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCC
Q 002468 313 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 392 (918)
Q Consensus 313 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~ 392 (918)
|+|||++.|.+....++..+.+++++..++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998776666666666677777889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEE
Q 002468 393 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 472 (918)
Q Consensus 393 ~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lI 472 (918)
+++|+++++++++++++||.+||..+|.||+++.|.++.+++.++|++|||||+||++||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999977788899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 002468 473 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 473 lSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 540 (918)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|+++|++.+++++++++.+||+..|++.|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999876
No 12
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=345.00 Aligned_cols=253 Identities=30% Similarity=0.453 Sum_probs=218.4
Q ss_pred CchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 558 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 558 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
+....+.+.|.++++++||+||||||+++..+| ....++++++++|++|+++++|.|+|+|||+..+++.+
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 455677888999999999999999999999999 67889999999999999999999999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHH
Q 002468 638 FQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 717 (918)
Q Consensus 638 ~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e 717 (918)
++..++++||+||++++..++.|.....+..++.|++.+.++++++++++||+++|.|+++++||||+++++....++..
T Consensus 75 ~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 75 FGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred cCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 99669999999999997555554333335567889999999999999999999999999999999999977666555544
Q ss_pred HHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCC
Q 002468 718 MLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPD 797 (918)
Q Consensus 718 l~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~ 797 (918)
..... .. ...++++.|+++||++|.++|||.++++++++.++ ..++++|.|| |.|||+||++++..
T Consensus 155 ~~~~~-~~---~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~------~~~~~~~aGD-D~TDE~~F~~v~~~--- 220 (266)
T COG1877 155 EAATL-IN---ELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF------DGRFPIFAGD-DLTDEDAFAAVNKL--- 220 (266)
T ss_pred HHHhc-cc---cccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC------CCCcceecCC-CCccHHHHHhhccC---
Confidence 43333 11 11289999999999999999999999999999873 2368999999 99999999999651
Q ss_pred CCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEE
Q 002468 798 DGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFS 877 (918)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 877 (918)
..++
T Consensus 221 ----------------------------------------------------------------------------~~~~ 224 (266)
T COG1877 221 ----------------------------------------------------------------------------DSIT 224 (266)
T ss_pred ----------------------------------------------------------------------------CCce
Confidence 2689
Q ss_pred EEECCCCCccceecCCHHHHHHHHHHHHhhcC
Q 002468 878 CAVGRPRTNARFLLQSSDEVVSFLKKLADASS 909 (918)
Q Consensus 878 ~~VG~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 909 (918)
|+||.+.|+|+|++.++..+..+|.+++....
T Consensus 225 v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 225 VKVGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred EEecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999977643
No 13
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=8.9e-39 Score=352.67 Aligned_cols=246 Identities=20% Similarity=0.329 Sum_probs=198.2
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCce
Q 002468 565 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 644 (918)
Q Consensus 565 ~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~ 644 (918)
-...++++++|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..++++++..+++
T Consensus 91 ~~~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~ 159 (354)
T PLN02151 91 LHKSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELY 159 (354)
T ss_pred HHhhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccce
Confidence 33456788999999999999999999 577999999999999996 5689999999999999999977899
Q ss_pred EEeeCceEEEec--CCeeee----eccccCChHHHHHHHHHHHHH---HhcCCCceeeeccceEEEEeeccChhhhHHHH
Q 002468 645 LAAENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQA 715 (918)
Q Consensus 645 liaenGa~i~~~--~~~w~~----~~~~~~~~~w~~~v~~il~~~---~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a 715 (918)
++|+||++++.. +..|.. .. ......|.+.+.++++.+ +.++||+++|+|+++++||||+++++..
T Consensus 160 laGsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~---- 234 (354)
T PLN02151 160 YAGSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW---- 234 (354)
T ss_pred EEEeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----
Confidence 999999999843 224531 11 123456887777766655 5789999999999999999999976522
Q ss_pred HHHHHHHhcCCCCCC-CeEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 716 RDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 716 ~el~~~L~~~~~~~~-~l~v~~G~~~vEI~p~-gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.++.+++ ..++.+. .+.++.|++++||+|. ++|||.|++.|++.+++.+ ...++++|||| |.|||+||++++.
T Consensus 235 ~~l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDaF~~L~~ 309 (354)
T PLN02151 235 SDLANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDAFKILRD 309 (354)
T ss_pred HHHHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHHHHHHhh
Confidence 2333444 3333333 4899999999999994 9999999999999988643 23468999999 9999999999954
Q ss_pred CCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCC
Q 002468 794 ELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKE 873 (918)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (918)
. .
T Consensus 310 ~------------------------------------------------------------------------------~ 311 (354)
T PLN02151 310 K------------------------------------------------------------------------------K 311 (354)
T ss_pred c------------------------------------------------------------------------------C
Confidence 1 1
Q ss_pred ceEEEEEC--CCCCccceecCCHHHHHHHHHHHHhhcC
Q 002468 874 NYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 909 (918)
Q Consensus 874 ~~~t~~VG--~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 909 (918)
++++|+|| .++|.|+|+|+||+||.+||+.|+....
T Consensus 312 ~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 312 QGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred CCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 35777787 6899999999999999999999987543
No 14
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=2.8e-38 Score=349.57 Aligned_cols=252 Identities=19% Similarity=0.310 Sum_probs=200.2
Q ss_pred CchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 558 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 558 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
|+.-+-+.++.+.++.+||+||||||+|++++| ..+.++++++++|++|++ +..|+|+|||++..+.++
T Consensus 97 l~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 97 LEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHh
Confidence 333344555667788999999999999999888 456899999999999994 689999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeee-------eccccCChHHHHHHHHH---HHHHHhcCCCceeeeccceEEEEeeccC
Q 002468 638 FQEYNLWLAAENGMFLRCTTGKWMT-------TMPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYAD 707 (918)
Q Consensus 638 ~~~l~l~liaenGa~i~~~~~~w~~-------~~~~~~~~~w~~~v~~i---l~~~~~~~~Gs~iE~K~~sl~~hyr~ad 707 (918)
++..++++||+||++++.+++.|.. .. ......|++.+.++ ++.+++++||++||+|+++++||||+++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad 244 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVD 244 (366)
T ss_pred hcccCceEEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCC
Confidence 7666789999999999854433321 00 01223466655555 5667889999999999999999999997
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcH
Q 002468 708 VEFGRIQARDMLQHLWTGPISNA-SVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 785 (918)
Q Consensus 708 ~e~~~~~a~el~~~L~~~~~~~~-~l~v~~G~~~vEI~p-~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDe 785 (918)
++.. .++..++ ..++.++ .+.++.|++++||+| .++|||.|+++||+.+++++ ...++++|||| |.|||
T Consensus 245 ~~~~----~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDE 315 (366)
T PLN03017 245 EKKW----SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDE 315 (366)
T ss_pred HHHH----HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccH
Confidence 7542 2333333 3333333 489999999999999 59999999999999998643 23578999999 99999
Q ss_pred HHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 002468 786 DVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 865 (918)
Q Consensus 786 dMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (918)
+||+.++..
T Consensus 316 DaF~~L~~~----------------------------------------------------------------------- 324 (366)
T PLN03017 316 DAFKMLRDR----------------------------------------------------------------------- 324 (366)
T ss_pred HHHHHHhhc-----------------------------------------------------------------------
Confidence 999999541
Q ss_pred ccccCCCCceEEEEEC--CCCCccceecCCHHHHHHHHHHHHhhc
Q 002468 866 NVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 908 (918)
Q Consensus 866 ~~~~~~~~~~~t~~VG--~~~s~A~y~l~~~~eV~~~L~~L~~~~ 908 (918)
..+|+|+|| .++|.|+|+|.||+||..||+.|++..
T Consensus 325 -------~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 325 -------GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred -------CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 137999999 589999999999999999999998764
No 15
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=6e-38 Score=349.99 Aligned_cols=247 Identities=20% Similarity=0.303 Sum_probs=199.4
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 564 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+.+|.++++++|||||||||++++++| +.+.++++++++|++|+++ ..|+|||||++..|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 457899999999999999999999999 6889999999999999985 57999999999999999998899
Q ss_pred eEEeeCceEEEecC-----Ceeeeecc-----------ccCChHHHHHHHHHHHH---HHhcCCCceeeeccceEEEEee
Q 002468 644 WLAAENGMFLRCTT-----GKWMTTMP-----------EHLNMEWVDSLKHVFEY---FTERTPRSHFEQRETSLVWNYK 704 (918)
Q Consensus 644 ~liaenGa~i~~~~-----~~w~~~~~-----------~~~~~~w~~~v~~il~~---~~~~~~Gs~iE~K~~sl~~hyr 704 (918)
+++|+||++++... ..|..... ......|.+.+.++++. ++.++||+++|+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 99999999997421 11211100 01134677555555544 6677899999999999999999
Q ss_pred ccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCcCCCCCCCCc--eEEEEecCC
Q 002468 705 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAID--YVLCIGHFL 781 (918)
Q Consensus 705 ~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p-~gvnKG~ai~~Ll~~l~~~~~~~~~~d--~vlaiGD~d 781 (918)
++++++...++..+...+ .. ...+.++.|++++||+| .++|||.||++|++++++.. .+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~-----~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSN-----CDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCc-----ccceeEEEECC-C
Confidence 998877666666666555 22 12488999999999999 59999999999999998531 23 3599999 9
Q ss_pred CCcHHHHHHcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002468 782 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSD 861 (918)
Q Consensus 782 ~nDedMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (918)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999998541
Q ss_pred ccccccccCCCCceEEEEEC--CCCCccceecCCHHHHHHHHHHHHhhcC
Q 002468 862 KTSYNVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 909 (918)
Q Consensus 862 ~~~~~~~~~~~~~~~t~~VG--~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 909 (918)
..+++|+|| .+.|.|+|+|+||+||.+||+.|+....
T Consensus 343 -----------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 343 -----------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred -----------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 025777776 5899999999999999999999988653
No 16
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=3.8e-39 Score=343.95 Aligned_cols=203 Identities=36% Similarity=0.603 Sum_probs=146.9
Q ss_pred EEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEEe
Q 002468 576 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 655 (918)
Q Consensus 576 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~~ 655 (918)
||||||||++++++| ..+.++++++++|++|+++++|.|+|+|||+...++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999988 68899999999999999999999999999999997776666689999999999997
Q ss_pred cCC-eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeE
Q 002468 656 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 733 (918)
Q Consensus 656 ~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~l~ 733 (918)
+++ .|.... ......|++.+.++++.+++++||+++|+|+++++||||+++++++..++.++.+++ ...+.. .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 665 455322 345678999999999999999999999999999999999999998888888888888 443333 4899
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 734 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 734 v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++.|+++|||+|.+++||.|+++|++.++..+ .+++++||+|| |.|||+||++++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~---~~~~~~l~~GD-D~tDE~~f~~~~~ 205 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFAG---PKPDFVLYIGD-DRTDEDAFRALRE 205 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTT
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCccc---cccceeEEecC-CCCCHHHHHHHHh
Confidence 99999999999999999999999999987431 34789999999 9999999999976
No 17
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=4e-35 Score=357.67 Aligned_cols=528 Identities=14% Similarity=0.164 Sum_probs=333.9
Q ss_pred CCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh-----------------cCCChHHH-HHHHHhCCEEeE
Q 002468 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----------------TLPSRSDL-LRAVLAADLVGF 274 (918)
Q Consensus 213 ~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr-----------------~lP~~~~l-l~~ll~aDlIgf 274 (918)
.|+||.|+++--.++..|++.. ++|.+++.|.- ..+-++ .++.|-++ -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999998888888888765 78899999963 111111 01222222 123668999999
Q ss_pred eCHHHHHHHHHHH-------HHHhccccCCCceeeCCe-eeEEEEeeCCcChhhhhhhhcCCchH-------------HH
Q 002468 275 HTYDYARHFVSAC-------TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQ-------------VH 333 (918)
Q Consensus 275 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~i~~~g~-~~~v~v~P~GID~~~f~~~~~~~~~~-------------~~ 333 (918)
.|..........- .|.|.. ....++..+|+ ..++.|+|+|||++.|.+.....+.. ..
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 9988776533210 011100 00123333332 23899999999999999753211100 01
Q ss_pred HHHHHHHh--cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 002468 334 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 407 (918)
Q Consensus 334 ~~~lr~~~--~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y----~~l~~~l~~lv 407 (918)
...+++.+ +++++||+|||+++.||+..+|+||..+.+..+.. ++.+ ++|... +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12333333 57789999999999999999999999886543221 2443 345321 11111 12234555666
Q ss_pred HhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc
Q 002468 408 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 483 (918)
Q Consensus 408 ~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l 483 (918)
.+++. .+ .|. |.|+++.+++..+|+.| ||||+||++||||||++|||||+ .|+|+|..+|..+.+
T Consensus 542 ~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 55432 12 354 67999999999999988 69999999999999999999995 899999999999987
Q ss_pred --cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHh-hhcccc------C
Q 002468 484 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA-QLRIKQ------V 554 (918)
Q Consensus 484 --g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~-~~~~~~------~ 554 (918)
|.+|++|+|.|++++|++|.++|+.+ +.++++..+.++.+..|+|..-++.++..+......+ +.+... .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 67899999999999999999999854 5667777888888999999999999998887654321 000000 0
Q ss_pred ---CC-------------------------------CCc-------hHHHHHHHH----------------------hcC
Q 002468 555 ---PP-------------------------------SLR-------EADSIERYL----------------------RSN 571 (918)
Q Consensus 555 ---~~-------------------------------~l~-------~~~~~~~y~----------------------~s~ 571 (918)
.+ .++ +...+.... .-.
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 00 001 011111111 112
Q ss_pred CeEEE--EecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhh---cCCCCcEEEEcCCChhhHHHHhcccC----
Q 002468 572 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC---HDPKTTIVVLSGSDRNVLDKNFQEYN---- 642 (918)
Q Consensus 572 ~rLI~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~---~d~g~~V~IvSGR~~~~L~~~~~~l~---- 642 (918)
+++|+ +|+|.| +.. .+.+.++++.+. ......++++|||++..+.+.+...+
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 45666 899999 322 123334444443 22346788999999999999887653
Q ss_pred --ceEEeeCceEEEecC------Ceeeeec--cccCChHH-HHHHHHHHHHHHhcC--------CCceeeeccce--EEE
Q 002468 643 --LWLAAENGMFLRCTT------GKWMTTM--PEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 701 (918)
Q Consensus 643 --l~liaenGa~i~~~~------~~w~~~~--~~~~~~~w-~~~v~~il~~~~~~~--------~Gs~iE~K~~s--l~~ 701 (918)
..+||.-|..|+..+ ..|..-. ..+.+..| .+.+.+.+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 368999999998641 2222100 01234566 345665555544321 33444443333 333
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceE-EEEe
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIG 778 (918)
Q Consensus 702 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~--G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~v-laiG 778 (918)
-|.-.+++.. ...+++.+.|... ...+.++. +...++|.|...+||.||++|+.+++ ++.+.+ +++|
T Consensus 911 SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3431222211 1234555555222 22344443 35799999999999999999999998 678888 5599
Q ss_pred cCCCC-c-HHHHHHc
Q 002468 779 HFLGK-D-EDVYAFF 791 (918)
Q Consensus 779 D~d~n-D-edMf~~~ 791 (918)
| ..| | |+|+.-+
T Consensus 981 d-SGntD~e~Ll~G~ 994 (1050)
T TIGR02468 981 E-SGDTDYEGLLGGL 994 (1050)
T ss_pred c-CCCCCHHHHhCCc
Confidence 9 888 9 6665443
No 18
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=5.4e-36 Score=321.47 Aligned_cols=238 Identities=24% Similarity=0.365 Sum_probs=202.5
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeC
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 649 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaen 649 (918)
|++++|||||||||++..++| ....++++++++|++|++++++.|+|+|||+..++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 56789999999999999999999999999999998877655579999999
Q ss_pred ceEEEecCC--eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeecc-ChhhhHHHHHHHHHHHhcCC
Q 002468 650 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 726 (918)
Q Consensus 650 Ga~i~~~~~--~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~a-d~e~~~~~a~el~~~L~~~~ 726 (918)
|++++.++. .|.... .....|++.+.++++++.++ ||+++|+|+++++||||.+ +++++..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNLT--EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeech--hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986322 244321 12257888899999998887 9999999999999999999 7888888888887776 2
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCCCCCCCCCCC
Q 002468 727 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTR 806 (918)
Q Consensus 727 ~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~~~~~~~~~~ 806 (918)
...++.++.|+.++|++|.++|||.++++++++++ ...++++|||| +.||++||+.++...
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~----------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQW----------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhccc-----------
Confidence 23478899999999999999999999999999987 45689999999 999999999994310
Q ss_pred CCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEE--CCCC
Q 002468 807 PTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAV--GRPR 884 (918)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~V--G~~~ 884 (918)
...++++|+| |.+.
T Consensus 207 ----------------------------------------------------------------~~~g~~~v~v~~g~~~ 222 (244)
T TIGR00685 207 ----------------------------------------------------------------GNYGFYPVPIGSGSKK 222 (244)
T ss_pred ----------------------------------------------------------------CCCCeEEEEEecCCcC
Confidence 0025799999 8889
Q ss_pred CccceecCCHHHHHHHHHHHH
Q 002468 885 TNARFLLQSSDEVVSFLKKLA 905 (918)
Q Consensus 885 s~A~y~l~~~~eV~~~L~~L~ 905 (918)
|.|.|+++++++|.++|+.|+
T Consensus 223 ~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 223 TVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCceEeCCCHHHHHHHHHHHh
Confidence 999999999999999999986
No 19
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=6.9e-36 Score=324.21 Aligned_cols=236 Identities=22% Similarity=0.241 Sum_probs=197.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCce
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 651 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa 651 (918)
+++||+||||||++.+.+| ....++++++++|++|++++++.|+|+|||++..+.++++.+++.++++||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999998888 5678999999999999987899999999999999999999888889999999
Q ss_pred EEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCC
Q 002468 652 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 731 (918)
Q Consensus 652 ~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~ 731 (918)
+++..++.|.. ...+.+|...+.+.++.+..++||+++|.|+.+++|||+.++.+ .....++.+.+ ...+. .
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~--~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP--Q 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--c
Confidence 99854444432 12455677777788888888999999999999999999877422 11223343344 22221 3
Q ss_pred eEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCcCCCCCCCCCCCCCCCCCc
Q 002468 732 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAI 811 (918)
Q Consensus 732 l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~~~~~~~~~~~~~~~~~~ 811 (918)
+.+..|+.++||+|+++|||.||++++++++ +..++++|||| +.||++||++++..
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~----------------- 212 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRL----------------- 212 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhc-----------------
Confidence 6678899999999999999999999999998 45789999999 99999999999541
Q ss_pred CCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEECCCCCccceec
Q 002468 812 KVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLL 891 (918)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l 891 (918)
++++|+||.+.|.|+|+|
T Consensus 213 --------------------------------------------------------------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 213 --------------------------------------------------------------GGISVKVGTGATQASWRL 230 (266)
T ss_pred --------------------------------------------------------------CCeEEEECCCCCcCeEeC
Confidence 469999999999999999
Q ss_pred CCHHHHHHHHHHHHhhcCc
Q 002468 892 QSSDEVVSFLKKLADASSS 910 (918)
Q Consensus 892 ~~~~eV~~~L~~L~~~~~~ 910 (918)
++|++|.+||+.|+...+.
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999987663
No 20
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=247.41 Aligned_cols=272 Identities=19% Similarity=0.230 Sum_probs=203.0
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
...|+|++|+.. .+...++++.|++++.+.+|..|.. +. +..++.|.+.+.. ...++. +.
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~-------------~~~~~~ii~~S~~-~~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-EL-------------LDKNAKIIVPSQF-LKKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hH-------------hccCCEEEEcCHH-HHHHHH---hh
Confidence 357999999843 3445667888999999999987631 11 1246777776653 333332 11
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
+ ...++.++|+|||.+.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~-----~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP-----Q---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc-----h---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578899999998886431 1 1233334 26789999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
++.+++|++ .|+++|.+......+...+.+++.+++.+++. .|+ |.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 58888865432222334556677777666532 254 57899999999999999999999
Q ss_pred CCC-ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeE-EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 002468 448 SLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 523 (918)
Q Consensus 448 Sl~-EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~al-lVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~ 523 (918)
|.+ ||||++++|||||+ .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++|+++. +.++.++.++.
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 975 99999999999994 899999999998887 56787 6789999999999999999763 45667777766
Q ss_pred H-HhcCHHHHHHHHHHHHHH
Q 002468 524 V-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 524 v-~~~~~~~W~~~fl~~l~~ 542 (918)
+ +.+++..-++.|++.|+.
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 5 778999888888887764
No 21
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=3.9e-24 Score=258.28 Aligned_cols=320 Identities=16% Similarity=0.196 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHh-h----CCCCeEEEEEcCC-----CCChhhh-hcCCCh--
Q 002468 193 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-Y----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR-- 259 (918)
Q Consensus 193 ~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~-~----~~~~~I~~flH~P-----fPs~e~f-r~lP~~-- 259 (918)
.-|.-+.++.++.+...-...||||+||||..++|.++++ . +.++++.|++|.- ||...+. ..+|+.
T Consensus 591 ~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 591 KRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 3343344444444443323579999999999998555443 2 3567899999975 3322211 112211
Q ss_pred -------------HH-HHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhh
Q 002468 260 -------------SD-LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 325 (918)
Q Consensus 260 -------------~~-ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~ 325 (918)
-- +..++..||.|..-++.|++.... ..-.|++. .+..+..++.+||||||++.|.|..
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPat 743 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPST 743 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCcc
Confidence 11 224677899999999999887654 11111111 0123456788999999999998753
Q ss_pred cC--------Cch---HHHHHHHHHHhc------CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcC
Q 002468 326 EI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 388 (918)
Q Consensus 326 ~~--------~~~---~~~~~~lr~~~~------~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~p 388 (918)
.. ... ......++++++ +.++|++||||++.||+..+++|+..+++ ++ +.||++|.
T Consensus 744 D~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGd- 816 (977)
T PLN02939 744 DRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGS- 816 (977)
T ss_pred ccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeC-
Confidence 21 000 011345677763 35899999999999999999999998875 22 55777764
Q ss_pred CCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCC
Q 002468 389 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 468 (918)
Q Consensus 389 sr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~ 468 (918)
++. ..+++++++++.+++.. ..|. |.+.++......+|+.||+||+||.+|||||+.+|||+|+
T Consensus 817 ----Gp~-~~~e~eL~~La~~l~l~------drV~-FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG---- 880 (977)
T PLN02939 817 ----SPV-PHIQREFEGIADQFQSN------NNIR-LILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG---- 880 (977)
T ss_pred ----CCc-HHHHHHHHHHHHHcCCC------CeEE-EEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC----
Confidence 221 13456666777665321 1355 4577887778899999999999999999999999999994
Q ss_pred ceEEEeCCCCchhhc-----------cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 002468 469 GVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWAE 534 (918)
Q Consensus 469 g~lIlSe~aG~~~~l-----------g~~allVnP~D~~~lA~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W~~ 534 (918)
.|+|++..+|+.+.+ |.+|++|+|.|+++++++|.+++. ..++.+..+..+. ....++|...++
T Consensus 881 tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~ 958 (977)
T PLN02939 881 SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSAS 958 (977)
T ss_pred CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHHH
Confidence 799999999998866 247999999999999999999986 2344444444432 336788988888
Q ss_pred HHHHHHHHhH
Q 002468 535 TFVSELNDTV 544 (918)
Q Consensus 535 ~fl~~l~~~~ 544 (918)
.++.-...+.
T Consensus 959 qYeeLY~~ll 968 (977)
T PLN02939 959 QYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH
Confidence 8877665543
No 22
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=8.9e-25 Score=248.15 Aligned_cols=300 Identities=23% Similarity=0.203 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCC
Q 002468 191 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 270 (918)
Q Consensus 191 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aD 270 (918)
.+..|...++.++.++.. ..+.|+||+|+++.+.++...+. ...|+.++.|+++.... .. ....+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~-~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~~--~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLL-DLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--RR--VWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhccccc-cCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--HH--HHHHHHHHHHhCC
Confidence 467787777777665322 22579999999998777665543 36788889999875321 00 1122333445678
Q ss_pred EEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEE
Q 002468 271 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 347 (918)
Q Consensus 271 lIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vI 347 (918)
.+.+.+.++++.+ + . ..++ ++|+|||+......... ......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~----------------~--~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ----------------V--P--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC----------------C--C--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 8777663322111 0 1 1234 89999997542211111 12233455555 377899
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCC
Q 002468 348 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 427 (918)
Q Consensus 348 l~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 427 (918)
++|||+++.||+..+|+||+.+.+++|++ .|+++|.+... .+++.++.+++ ....+. . ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~-~~~~~~~~~~~---~~~~~~----~--~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATD-DPEGWIVYEEV---LEYAEG----D--PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCC-CchhHHHHHHH---HHHhCC----C--CCeEEEec
Confidence 99999999999999999999998887764 58878764321 12233322232 222211 1 13555433
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 002468 428 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 504 (918)
Q Consensus 428 ~-v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~ 504 (918)
. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 2 489999999999999999999999999999999995 899999999999888 567898874 5688999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 505 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 505 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
++++ ++++.++.++.++++ ..+++...++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457778888888877 579999999988877654
No 23
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.93 E-value=3.4e-24 Score=251.14 Aligned_cols=295 Identities=23% Similarity=0.286 Sum_probs=201.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhC----CCCeEEEEEcCCCC----ChhhhhcC--CC-------------hHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFP----SSEIHRTL--PS-------------RSDLLRAVLA 268 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~----~~~~I~~flH~PfP----s~e~fr~l--P~-------------~~~ll~~ll~ 268 (918)
..|+||+||||.-++|.++++.. .+.|+.++.|..-. +.+.+..+ |+ ..-+..++..
T Consensus 118 ~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 118 RPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 67999999999999999998653 46899999998621 11111111 10 1112335677
Q ss_pred CCEEeEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeeCCcChhhhhhhhcCC-----------chHHHHH
Q 002468 269 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN-----------PVQVHIK 335 (918)
Q Consensus 269 aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~--~~g~~~~v~v~P~GID~~~f~~~~~~~-----------~~~~~~~ 335 (918)
||.|...++.+++..... ..| .++. +..+..++.++|||||++.|.+..... .-.+..+
T Consensus 198 ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 269 (466)
T PRK00654 198 ADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKR 269 (466)
T ss_pred cCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHH
Confidence 888888887776553320 000 0000 111345788999999999987642100 0011234
Q ss_pred HHHHHhc----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhh
Q 002468 336 ELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 411 (918)
Q Consensus 336 ~lr~~~~----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN 411 (918)
.++++++ +.++|++|||+++.||++.+++|+++++++ ++.|+++|.+ + + .+++++++++.+.+
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~---~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P---ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---HHHHHHHHHHHHCC
Confidence 5666663 567999999999999999999999998753 2557777642 1 1 24556666766543
Q ss_pred cccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c-----
Q 002468 412 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G----- 484 (918)
Q Consensus 412 ~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g----- 484 (918)
. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|+ .|+|+|+.+|+.+.+ +
T Consensus 337 ~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~ 403 (466)
T PRK00654 337 G--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDG 403 (466)
T ss_pred C--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCC
Confidence 2 24444554 66667899999999999999999999999999994 799999999999988 4
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 002468 485 -AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542 (918)
Q Consensus 485 -~~allVnP~D~~~lA~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 542 (918)
.+|++|+|.|++++|++|.++|.. .++.++++..+.+ ...+++..-++.+++-..+
T Consensus 404 ~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 404 EATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRR 462 (466)
T ss_pred CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHH
Confidence 569999999999999999999863 2223333333332 2567777777776655544
No 24
>PLN02316 synthase/transferase
Probab=99.93 E-value=7.3e-24 Score=260.28 Aligned_cols=309 Identities=15% Similarity=0.116 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhh-----CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHH
Q 002468 192 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV 266 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~-----~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~l 266 (918)
..-|..+++..++.+.+.-...||||+||+|..++|.++++. ..++++.+++|..-. ....+-.++
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~l 759 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKAM 759 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHHH
Confidence 444444555555555444346799999999999999999874 356899999996421 112244567
Q ss_pred HhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcC--C-----c----h-HHHH
Q 002468 267 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVHI 334 (918)
Q Consensus 267 l~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~--~-----~----~-~~~~ 334 (918)
..||.|..-++.|++..... .. ...+..++.+||+|||++.|.+.... | + . ....
T Consensus 760 ~~AD~ViTVS~tya~EI~~~----~~---------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k 826 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN----SA---------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAK 826 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc----cC---------cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhH
Confidence 88999999999887765430 00 01134578899999999988764210 0 0 0 1123
Q ss_pred HHHHHHhc----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhh
Q 002468 335 KELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 410 (918)
Q Consensus 335 ~~lr~~~~----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~I 410 (918)
..++++++ +.++|++||||.+.||+..+++|+..+++. .+.||++|.+ |+ ..++.++++++.++
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~------~~qlVIvG~G-----pd-~~~e~~l~~La~~L 894 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER------NGQVVLLGSA-----PD-PRIQNDFVNLANQL 894 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc------CcEEEEEeCC-----CC-HHHHHHHHHHHHHh
Confidence 34666663 568999999999999999999999998863 2457766642 22 23566777787776
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c----
Q 002468 411 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---- 484 (918)
Q Consensus 411 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g---- 484 (918)
+..+. ..|.+ .+..+......+|+.||+||+||.+|||||+.+|||+|+ .|+|++..+|..+.+ +
T Consensus 895 g~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~ 965 (1036)
T PLN02316 895 HSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDK 965 (1036)
T ss_pred CccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccccc
Confidence 54332 12443 345554444589999999999999999999999999994 699999999999987 2
Q ss_pred ---------CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 002468 485 ---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 485 ---------~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 543 (918)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..++|..=++.++.-...+
T Consensus 966 ~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 966 ERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3799999999999999999999865333333344444444 5588888888887665544
No 25
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.93 E-value=3e-24 Score=249.84 Aligned_cols=312 Identities=15% Similarity=0.173 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChh--hhh------------cCCChHH-
Q 002468 197 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRSD- 261 (918)
Q Consensus 197 ~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e--~fr------------~lP~~~~- 261 (918)
.+...+...+.+.....|+|++|+++..++..++++.. +.|+.++.|....... +.. .++.+-.
T Consensus 99 ~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T TIGR02472 99 ELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEA 177 (439)
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHH
Confidence 33444444443333346999999987767777776644 6789999997532110 000 0011100
Q ss_pred HHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh
Q 002468 262 LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF 341 (918)
Q Consensus 262 ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~ 341 (918)
....+..+|.|...+...+...+. ...+. ...++.++|+|||++.|.+....+......+.+++..
T Consensus 178 ~~~~~~~ad~ii~~s~~~~~~~~~---~~~~~-----------~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 178 EEETLAHASLVITSTHQEIEEQYA---LYDSY-----------QPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHH---hccCC-----------CccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 112344677776666543222110 00011 2357889999999999976432221111111222211
Q ss_pred --cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHH----HHHHHHHHHHHhhhcccC
Q 002468 342 --AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGRFG 415 (918)
Q Consensus 342 --~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~----~l~~~l~~lv~~IN~~~g 415 (918)
+++++|++|||+++.||+..+|+||..+.+..+.. ++++ ++|.. .+.+.++ ++.+++.+++.+++
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g--~~~~~l~~~~~~~~~~~~~~~~~~~---- 314 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCR--DDIRKMESQQREVLQKVLLLIDRYD---- 314 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCc--cccccccHHHHHHHHHHHHHHHHcC----
Confidence 46789999999999999999999998653211111 2332 23321 1111111 22333445555432
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEE
Q 002468 416 TLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 489 (918)
Q Consensus 416 ~~~~~pV~~~~g~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~all 489 (918)
..+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|+.+|+.+.+ |.+|++
T Consensus 315 l~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~l 387 (439)
T TIGR02472 315 LYG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNGLL 387 (439)
T ss_pred CCc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEE
Confidence 222 244 67899999999999988 99999999999999999999995 899999999999888 467999
Q ss_pred ECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 490 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 490 VnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
|+|.|++++|++|.++++++ ++++.+.++.++++ ..+++..-++.+++-|
T Consensus 388 v~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 388 VDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred eCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999865 57777888888877 5678777777776543
No 26
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.93 E-value=8.1e-24 Score=248.43 Aligned_cols=311 Identities=22% Similarity=0.278 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCC--CCeEEEEEcCCCC----Chhhhhc--CCCh-------
Q 002468 195 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR------- 259 (918)
Q Consensus 195 Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~--~~~I~~flH~PfP----s~e~fr~--lP~~------- 259 (918)
+..+++..++.+...-...|+||+||+|..++|.++++... ++|+.++.|...+ +.+.+.. +|+.
T Consensus 111 ~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL 190 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh
Confidence 33344444444443333679999999999999999988654 3899999998642 1222222 1211
Q ss_pred ------HHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeeCCcChhhhhhhhcCC---
Q 002468 260 ------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 328 (918)
Q Consensus 260 ------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~--~~g~~~~v~v~P~GID~~~f~~~~~~~--- 328 (918)
..+..++..||.|...++.|++..... ..+. ++. +..+..++.++|||||.+.|.+.....
T Consensus 191 ~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~-----~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~ 262 (473)
T TIGR02095 191 EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY-----GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA 262 (473)
T ss_pred hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc-----cchhHHHhcCCCeEEEeCCCCccccCCCCCccccc
Confidence 012335667888888887776654321 0010 000 011345788999999999987642110
Q ss_pred --------chHHHHHHHHHHhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHH
Q 002468 329 --------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE 395 (918)
Q Consensus 329 --------~~~~~~~~lr~~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~ 395 (918)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ + +
T Consensus 263 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~- 331 (473)
T TIGR02095 263 NYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D-P- 331 (473)
T ss_pred CcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-H-
Confidence 00112334666663 5789999999999999999999999987542 567777642 1 2
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC
Q 002468 396 YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 475 (918)
Q Consensus 396 y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe 475 (918)
.+++++++++.+.+. .+.+ .+.++.+++..+|+.||++|+||.+||||++.+|||+|+ .|+|+|.
T Consensus 332 --~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~ 396 (473)
T TIGR02095 332 --ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRR 396 (473)
T ss_pred --HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEcc
Confidence 345566666654321 2443 345688888999999999999999999999999999994 7999999
Q ss_pred CCCchhhc--c------CCeEEECCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 476 FAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 476 ~aG~~~~l--g------~~allVnP~D~~~lA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
.+|..+.+ | .+|++|+|.|++++|++|.++|.+ .++.++++.++.+ .+.+++..-++.+++-.+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999988 4 679999999999999999999873 2334444444332 256888887877766544
No 27
>PRK14098 glycogen synthase; Provisional
Probab=99.93 E-value=9.8e-24 Score=248.07 Aligned_cols=321 Identities=15% Similarity=0.195 Sum_probs=215.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhC------CCCeEEEEEcCCC-----CChhhhhcC
Q 002468 188 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIHRTL 256 (918)
Q Consensus 188 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~------~~~~I~~flH~Pf-----Ps~e~fr~l 256 (918)
|.+...-|.-++++.++.+.+.--..||||+||||..++|.++++.. .++|++++.|... |...+-..+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 33445556556666666554432256999999999999999998753 4789999999852 211111113
Q ss_pred CCh------------HHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhh
Q 002468 257 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 324 (918)
Q Consensus 257 P~~------------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~ 324 (918)
|+. .-+-.++..||.|..-++.|++...+....-.|++. . +..+..++.++|+|||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---~--l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---V--LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---H--HHhcCCCeeEEeCCccccccCCc
Confidence 311 123345778899888888887764320000011110 0 11134678899999999999864
Q ss_pred hcCCch------------HHHHHHHHHHhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEc
Q 002468 325 LEINPV------------QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 387 (918)
Q Consensus 325 ~~~~~~------------~~~~~~lr~~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ 387 (918)
.. +.. ......++++++ +.++|++||||.+.||++.+++|+.++++. ++.|+++|.
T Consensus 272 ~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~ 344 (489)
T PRK14098 272 TD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGS 344 (489)
T ss_pred cc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeC
Confidence 32 110 011234555442 567999999999999999999999998752 366887774
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCC
Q 002468 388 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 467 (918)
Q Consensus 388 psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~ 467 (918)
+ +. .+++++++++.+... .|. +.+.++.+++..+|+.||+||+||.+||||++.+|||+|+
T Consensus 345 G-----~~--~~~~~l~~l~~~~~~--------~V~-~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G--- 405 (489)
T PRK14098 345 G-----DK--EYEKRFQDFAEEHPE--------QVS-VQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG--- 405 (489)
T ss_pred C-----CH--HHHHHHHHHHHHCCC--------CEE-EEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC---
Confidence 2 21 245566666665421 254 4577899999999999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc------cCCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 002468 468 KGVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSE 539 (918)
Q Consensus 468 ~g~lIlSe~aG~~~~l------g~~allVnP~D~~~lA~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 539 (918)
.|+|++..+|..+.+ +.+|++|+|.|++++|++|.+++.+ .++....+.++. ....+++..-++.+++-
T Consensus 406 -~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~l 482 (489)
T PRK14098 406 -TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQL 482 (489)
T ss_pred -CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHH
Confidence 689999999998876 3579999999999999999998743 222222222222 23567777777777655
Q ss_pred HHH
Q 002468 540 LND 542 (918)
Q Consensus 540 l~~ 542 (918)
.++
T Consensus 483 Y~~ 485 (489)
T PRK14098 483 YRE 485 (489)
T ss_pred HHH
Confidence 544
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.92 E-value=3.6e-23 Score=238.33 Aligned_cols=283 Identities=17% Similarity=0.120 Sum_probs=204.8
Q ss_pred HHHhhcC--CCCEEEEeCCccchHHHHHHhh-CCCCeEEEEEcCCCCCh-hhhhcCCChHHHHHHHHhCCEEeEeCHHHH
Q 002468 205 VVNKHYK--DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS-EIHRTLPSRSDLLRAVLAADLVGFHTYDYA 280 (918)
Q Consensus 205 ~i~~~~~--~~DiIwvHDyhL~llp~~lr~~-~~~~~I~~flH~PfPs~-e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~ 280 (918)
.+.+..+ +.|+|+.|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....
T Consensus 109 ~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~ 186 (406)
T PRK15427 109 ICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWA 186 (406)
T ss_pred HHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHH
Confidence 3344443 4699999988776677777763 22445677888652211 1110 011223333457899888776544
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~ 360 (918)
+.+.+ +|. ...++.++|+|||++.|.+.... ...+...|++|||+.+.||+.
T Consensus 187 ~~l~~-----~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~ 238 (406)
T PRK15427 187 GRLQK-----MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLH 238 (406)
T ss_pred HHHHH-----cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHH
Confidence 44321 121 23568899999999988643110 123456799999999999999
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
.+|+|++.+.+++|+ +.|+++|. ++.. +++++++.+.+. ...+.|.|.++.+++..+|+.
T Consensus 239 ~ll~a~~~l~~~~~~----~~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~ 298 (406)
T PRK15427 239 VAIEACRQLKEQGVA----FRYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDD 298 (406)
T ss_pred HHHHHHHHHHhhCCC----EEEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHh
Confidence 999999999887776 45777763 4433 345555555432 123446899999999999999
Q ss_pred ccEEEECCCC------ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 441 TDVALVTSLR------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 441 ADv~vv~Sl~------EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
||+||+||.. |||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++.+++
T Consensus 299 aDv~v~pS~~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~ 374 (406)
T PRK15427 299 ADVFLLPSVTGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDE 374 (406)
T ss_pred CCEEEECCccCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHH
Confidence 9999999984 99999999999995 899999999999988 67899999999999999999999966777
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 002468 513 REKRHWHNFTHV-TTHTAQEWAETFVSELN 541 (918)
Q Consensus 513 r~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 541 (918)
++++.++.++++ ..|++...++.+.+-+.
T Consensus 375 ~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 375 LAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 888888888887 56888888887776554
No 29
>PRK14099 glycogen synthase; Provisional
Probab=99.92 E-value=3.2e-23 Score=243.50 Aligned_cols=295 Identities=20% Similarity=0.234 Sum_probs=197.2
Q ss_pred CCCEEEEeCCccchHHHHHHhh-CCCCeEEEEEcCC-----CCChhhhhc--CCCh-------------HHHHHHHHhCC
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPSR-------------SDLLRAVLAAD 270 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~-~~~~~I~~flH~P-----fPs~e~fr~--lP~~-------------~~ll~~ll~aD 270 (918)
..||||+||||..++|.+++.. ..++++.++.|.. ||. ..+.. +|+. .-+-.++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 5699999999999999998753 3467899999975 221 11111 1110 11334567788
Q ss_pred EEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCC--------ch---HHHHHHHHH
Q 002468 271 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN--------PV---QVHIKELQE 339 (918)
Q Consensus 271 lIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~--------~~---~~~~~~lr~ 339 (918)
.|..-++.+++.....- .-.|++. .+..+..++.++|+|||++.|.+..... .. ......+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~~-----~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLDG-----LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChHH-----HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 88777777766543200 0001000 0011345788999999999998653210 00 011234566
Q ss_pred Hhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhccc
Q 002468 340 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 414 (918)
Q Consensus 340 ~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~ 414 (918)
+++ +.++|++||||.+.||+..+++|++.+++. .+.|+++|.+ + + .+++++++++.+...
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~-- 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG-- 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC--
Confidence 653 356788899999999999999999988753 2557777642 2 1 244566666554321
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c-------
Q 002468 415 GTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 484 (918)
Q Consensus 415 g~~~~~pV~~~~g~v~~~el~aly-~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g------- 484 (918)
.+.++.|+ .+++..+| +.||+||+||.+||||++.+|||+|+ .|+|+|..+|+.+.+ +
T Consensus 351 ------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 351 ------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 24445665 57888877 56999999999999999999999994 688999999998877 2
Q ss_pred --CCeEEECCCCHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 002468 485 --AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 485 --~~allVnP~D~~~lA~ai~~a---L~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 543 (918)
.+|++|+|.|++++|++|.++ ++. ++.++++.++.+ .+.++|..-++.+++-..+.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHH
Confidence 369999999999999999985 433 344444444443 36678877777777665554
No 30
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.92 E-value=1.3e-22 Score=232.72 Aligned_cols=289 Identities=19% Similarity=0.193 Sum_probs=211.7
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh---cCCC--hHHHHH--HHHhCCEEeEeCHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLLR--AVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr---~lP~--~~~ll~--~ll~aDlIgf~t~~~~~~Fl 284 (918)
..|+|++|++....++.++++. .+.|+.+.+|..++-...+. ..|. ...+++ .+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999997666666666553 46788899997542111110 0111 122222 34578999999988777665
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 361 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~ 361 (918)
. ..+. ...++.++|+|||.+.|.+.. ....+.++ .++++|+++||+.+.||+..
T Consensus 180 ~----~~~~-----------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 R----HYDA-----------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred H----HcCC-----------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3 1121 235688999999998886431 11233344 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCcEEEEEEEcCCCCCh-HHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 362 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 362 ~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~-~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
+++|++.+++++|+. ++.|+++|.+.. ++ +.. +++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999988873 477888886542 23 333 3344555544321 1254 6789999999999999
Q ss_pred ccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 002468 441 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 518 (918)
Q Consensus 441 ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~ 518 (918)
||++++||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++.+ +.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 899999999988887 56799999999999999999999854 56667777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHh
Q 002468 519 HNFTHVTTHTAQEWAETFVSELNDT 543 (918)
Q Consensus 519 ~~~~~v~~~~~~~W~~~fl~~l~~~ 543 (918)
+.++.++.+++...++.+++-+.+.
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888899988888887766543
No 31
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.91 E-value=6.8e-23 Score=234.94 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=196.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCC--hhh-hh-cCCCh--------HH---HHHHHHhCCEEeEeC
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 276 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs--~e~-fr-~lP~~--------~~---ll~~ll~aDlIgf~t 276 (918)
..|+|+.|. .+....++++..|++++..+.|..+-. .+. |. ..+.+ .. ....+..||.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 469999994 555666789989999988777643311 010 10 11111 11 224566788888776
Q ss_pred HHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEec-
Q 002468 277 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 352 (918)
Q Consensus 277 ~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdR- 352 (918)
......|.. . + ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----~-----------~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----E-----------L---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----h-----------h---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 544333321 0 1 1468899999999998764211 01111111 46788999998
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHH---HHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCC
Q 002468 353 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE---YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 429 (918)
Q Consensus 353 Ld~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~---y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 429 (918)
+.+.||+..+++|+..+.+++|++ .|+++|......+.. -..+++ +++.+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~----~lvivG~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDA----RVVIVGGDGVSYGAPPPDGESWKQ---HMLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCc----EEEEEcCCCcccCCCCCCcccHHH---HHHHHhhcccC---cceEE-EeCCC
Confidence 999999999999999998888875 477777532110100 001111 22222222111 12355 57999
Q ss_pred CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 002468 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 430 ~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~ 507 (918)
+.+++.++|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++|+
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999995 899999999998888 568999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 002468 508 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 537 (918)
Q Consensus 508 m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 537 (918)
++ +++..+.++.++++.+ +++..-++.|+
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5777888888988866 77666555554
No 32
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.91 E-value=3.9e-22 Score=240.34 Aligned_cols=331 Identities=13% Similarity=0.148 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCC----hh-hhhcCC------Ch
Q 002468 192 FAAYIKANQMFADVVNKHYK-DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS----SE-IHRTLP------SR 259 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~-~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs----~e-~fr~lP------~~ 259 (918)
|..-..+....++.+..... ..|+|+.|.+.--+++..++++. ++|..+..|..-.. .. .+..+. .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 66665566666665554432 57999999988778887777754 68877777854110 00 011010 01
Q ss_pred -HHHHHHHHhCCEEeEeCHHHHHHHHHHHH-----HHhccc---cCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCch
Q 002468 260 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFE---GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 330 (918)
Q Consensus 260 -~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~-----r~lg~~---~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~ 330 (918)
..-+..|-.||.|.-.|++....-...+. ..+... ..-+++.+ ...|+.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 00124567799999888754322111111 011110 00011211 22478899999999999764321110
Q ss_pred -HHHH----------HHHHHHh-----cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCC---
Q 002468 331 -QVHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 391 (918)
Q Consensus 331 -~~~~----------~~lr~~~-----~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~--- 391 (918)
.... ...++.+ +++++|++||||++.||+..+++||.++.+.. ..+.||+||.+...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccc
Confidence 0000 0112222 36789999999999999999999998764332 24678888864311
Q ss_pred ChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----HccEEEECCCCccCChhHHHHHHhcCC
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 466 (918)
Q Consensus 392 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~----~ADv~vv~Sl~EG~nLv~lEamA~~~~ 466 (918)
...+..+..+++.+++.+.+. .+ .|. |.|. .+..++..+|+ .+||||+||.+||||||++|||||+
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~-flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIR-WIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEE-EccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 111222334556666665432 12 355 4565 35666666675 2479999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 467 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++..+.+++| +.|+|...++.+++-.
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 678999999999999999999874 24456667777777776 6788888888877554
No 33
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.91 E-value=2.6e-22 Score=235.60 Aligned_cols=311 Identities=22% Similarity=0.257 Sum_probs=209.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhC-----CCCeEEEEEcCCCCCh----hhhhc--CCC---
Q 002468 193 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS--- 258 (918)
Q Consensus 193 ~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~-----~~~~I~~flH~PfPs~----e~fr~--lP~--- 258 (918)
..|...++...+.+.+.-...|+||+||+|..++|.+++... .+.|+.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 344444555555554444568999999999999999998764 5789999999874321 11111 111
Q ss_pred ----------h-HHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCcee--eCCeeeEEEEeeCCcChhhhhhhh
Q 002468 259 ----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRAL 325 (918)
Q Consensus 259 ----------~-~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~--~~g~~~~v~v~P~GID~~~f~~~~ 325 (918)
. ..+..++..||.|...++.+++.+.+. .. ..+++ ...+..++.++|||||.+.|.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~ 261 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPAT 261 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCccc
Confidence 1 123345667888888887776654321 00 00000 112346789999999999988643
Q ss_pred cCC-----------chHHHHHHHHHHh-----cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCC
Q 002468 326 EIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 389 (918)
Q Consensus 326 ~~~-----------~~~~~~~~lr~~~-----~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ps 389 (918)
... .-......+++++ .++++|+++||+.+.||+..+++|++.+.++. +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 334 (476)
T cd03791 262 DPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG- 334 (476)
T ss_pred cchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC-
Confidence 211 0012233466655 36789999999999999999999999987643 557777642
Q ss_pred CCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCc
Q 002468 390 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 469 (918)
Q Consensus 390 r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g 469 (918)
+ + .+++++++++.+.. ..++++.+ .+.+++..+|+.||++|+||.+||||++.+|||+|+ .
T Consensus 335 --~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~ 395 (476)
T cd03791 335 --D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG----T 395 (476)
T ss_pred --C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----C
Confidence 1 2 24455556655431 13555544 457778899999999999999999999999999994 8
Q ss_pred eEEEeCCCCchhhc--cC------CeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 002468 470 VLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSE 539 (918)
Q Consensus 470 ~lIlSe~aG~~~~l--g~------~allVnP~D~~~lA~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 539 (918)
|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.++.++ ..+++..-++.+++-
T Consensus 396 pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 396 VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHH
Confidence 99999999999988 34 799999999999999999998643 2333333333322 346666666666543
No 34
>PLN00142 sucrose synthase
Probab=99.90 E-value=9.5e-22 Score=237.00 Aligned_cols=331 Identities=14% Similarity=0.120 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCC-----------CCChh-hhhcC-C
Q 002468 192 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTL-P 257 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~-~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~P-----------fPs~e-~fr~l-P 257 (918)
|..-..++...++.+.... ...|+|+-|++.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6555555666666554433 257999999777778888887754 78888888843 11111 11100 0
Q ss_pred ChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH-----hccc--c-CCCceeeCCeeeEEEEeeCCcChhhhhhhhcCC-
Q 002468 258 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRI-----LGFE--G-TPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN- 328 (918)
Q Consensus 258 ~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~-----lg~~--~-~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~- 328 (918)
...+ ...|-.||.|...|+......-..+.++ ++.. + .-.++.+. .-++.++|+|+|...|.+.....
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 0111 2245577777766654332111000000 0000 0 00112111 22788899999999987532110
Q ss_pred -------chHHHH---HHHHHHh-----cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCC-CCC
Q 002468 329 -------PVQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RTD 392 (918)
Q Consensus 329 -------~~~~~~---~~lr~~~-----~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ps-r~~ 392 (918)
.+.+.. ...++.+ +++++|++|||+++.||+..+++||.++.+..++ +.|++||.+. ...
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 000000 0011112 3567999999999999999999999987665543 5688887541 111
Q ss_pred --hHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCccCChhHHHHHHhcCC
Q 002468 393 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 466 (918)
Q Consensus 393 --~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---g~v~~~el~aly~-~ADv~vv~Sl~EG~nLv~lEamA~~~~ 466 (918)
..+..+..+++.+++.+.+.. + .|.++. +.++..+++.+|+ ++||||+||.+||||+|++|||||+
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 111112224455666654321 2 255432 2455678888777 5799999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 467 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++|. ..++.+.++.++.++++ +.|+|...++.+++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 778999999999999999987653 34567777778888887 6789888888877644
No 35
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.90 E-value=7.3e-22 Score=231.47 Aligned_cols=277 Identities=18% Similarity=0.208 Sum_probs=197.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCCh-H---HHHHH-HHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~-~---~ll~~-ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
+.|+||+|+...+.++.++-.+..++|+.+.+|.-+|........++. + .+.+. ...+|.|...+....+.|..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766655544433344678888888755432110011111 0 11122 23578888888766655542
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh----cCCeEEEEEecccccCCHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 362 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vIl~VdRLd~~KGi~~~ 362 (918)
.+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++||+.+.||+..+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 111 013468899999999998754321 1123333 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
++|++++ |+ +.|+++|. ++.. +++++++... +|+ |.|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG~-----G~~~----~~l~~~~~~~----------~V~-f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVGD-----GPYR----EELEKMFAGT----------PTV-FTGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEeC-----ChHH----HHHHHHhccC----------CeE-EeccCCHHHHHHHHHHCC
Confidence 9988754 54 45777763 4433 3444444321 355 579999999999999999
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 517 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~ 517 (918)
+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++. ++.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999994 899999999998877 3579999999999999999999985 45777788
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH-HHHh
Q 002468 518 WHNFTHVTTHTAQEWAETFVSE-LNDT 543 (918)
Q Consensus 518 ~~~~~~v~~~~~~~W~~~fl~~-l~~~ 543 (918)
++.++++++|++...++.++.. ...+
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 8888999999999998888874 4443
No 36
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.90 E-value=1.8e-21 Score=221.27 Aligned_cols=287 Identities=21% Similarity=0.200 Sum_probs=204.7
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh-----cCCChHHH-HHHHHhCCEEeEeCHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----TLPSRSDL-LRAVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr-----~lP~~~~l-l~~ll~aDlIgf~t~~~~~~Fl 284 (918)
...|+||+|++...+.+.++++ ..+.|+.+.+|..+|...+.. .......+ ...+..+|.|.+.+....+.+.
T Consensus 82 ~~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 160 (388)
T TIGR02149 82 VDADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDIL 160 (388)
T ss_pred CCCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHH
Confidence 3579999999887766665544 457888999998665321110 00011111 2234578988888876655554
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 361 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~ 361 (918)
+ ..-+. ...++.++|+|||++.|.+.. ...+++++ .++++|+++||+.+.||+..
T Consensus 161 ~---~~~~~-----------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~ 218 (388)
T TIGR02149 161 K---YYPDL-----------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPH 218 (388)
T ss_pred H---HcCCC-----------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHH
Confidence 2 10011 234688999999998886431 11233444 35679999999999999999
Q ss_pred HHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002468 362 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 441 (918)
Q Consensus 362 ~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 441 (918)
+++|++++. ++ +.|+++|... ...++.+++++.+..++... ..|+++.+.++.+++..+|+.|
T Consensus 219 li~a~~~l~---~~----~~l~i~g~g~-----~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 219 LLDAVHYIP---KD----VQVVLCAGAP-----DTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred HHHHHHHHh---hc----CcEEEEeCCC-----CcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhC
Confidence 999998873 23 3466555321 11234455555555543221 2367778899999999999999
Q ss_pred cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH------HHHHHHHHHHhcCCHHHH
Q 002468 442 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEER 513 (918)
Q Consensus 442 Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~------~~lA~ai~~aL~m~~~er 513 (918)
|++|+||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++|+|.|. ++++++|.++++. ++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~ 356 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELA 356 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHH
Confidence 99999999999999999999994 899999999999888 567999999998 9999999999985 4567
Q ss_pred HHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 514 EKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 514 ~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
.++..+.++.+ +.+++..+++.+++.+.+
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 77777777776 678999999988876654
No 37
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.90 E-value=2.5e-21 Score=219.71 Aligned_cols=295 Identities=20% Similarity=0.237 Sum_probs=207.1
Q ss_pred HHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhc-----CCC-hHHH-HHHHHhCCEEeEeC
Q 002468 204 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----LPS-RSDL-LRAVLAADLVGFHT 276 (918)
Q Consensus 204 ~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~-----lP~-~~~l-l~~ll~aDlIgf~t 276 (918)
..+.+.....|+|++|++....++..+.+. .+.++.+..|........... .+. +..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 333333336799999998777666666543 468888888875432111000 000 1111 22355799999988
Q ss_pred HHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEeccccc
Q 002468 277 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 356 (918)
Q Consensus 277 ~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~ 356 (918)
......+.. ..+ ....++.++|+|+|.+.|.+..... .....+. ...++.+|+++||+++.
T Consensus 172 ~~~~~~~~~----~~~-----------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYS----LYG-----------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHH----Hcc-----------ccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 876655543 111 1223478999999998886542211 1111111 12467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHH
Q 002468 357 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 436 (918)
Q Consensus 357 KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~a 436 (918)
||+..+++|+..+.+++|+ +.|+++|....... .....++++++.+.+.. ..|. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRER----ANLVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCC----eEEEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 9999999999999887776 45777775432221 12233455555544321 1244 679999999999
Q ss_pred HHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 002468 437 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 514 (918)
Q Consensus 437 ly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~ 514 (918)
+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ ++++
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-ALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHH
Confidence 9999999999999999999999999995 799999999999888 45799999999999999999999864 5677
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHH
Q 002468 515 KRHWHNFTHV-TTHTAQEWAETFV 537 (918)
Q Consensus 515 ~r~~~~~~~v-~~~~~~~W~~~fl 537 (918)
.+..+.++++ +.+++..+++.++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7777888887 7889888888765
No 38
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=1.9e-21 Score=223.16 Aligned_cols=278 Identities=15% Similarity=0.153 Sum_probs=194.3
Q ss_pred CCCEEEEeCCccchH-HHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHH-HHhCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~ll-p~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
..|+|++|+++.... ...+-.+..+.|+.+..|..|+..+.... +...+.+- +-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775543 23333334568899999987653322111 11122222 346888888887655544221
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~l 369 (918)
.+ ....++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~~-----------~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -AS-----------LDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -hC-----------CChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 11 123568899999999988653210 124678999999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 449 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl 449 (918)
.+++|++ .|+++|. ++.... +++++.+.+ ..+ .|. |.|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~----l~~~~~~~~----l~~--~v~-~~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRIL----LEEMREKYN----LQD--RVE-LLGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHH----HHHHHHHhC----CCC--eEE-EeCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888875 4776763 333333 444444432 111 255 5799999999999999999999999
Q ss_pred CccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcC
Q 002468 450 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHT 528 (918)
Q Consensus 450 ~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~ 528 (918)
.||||++++|||||+ .|+|+|..+|..+.+.+++.++-|.|.++++++|.+++.++. ++.....+.++.+ +.++
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~~~~~~l~~~l~~~l~~~~-~~~~~~~~~~~~~~~~fs 353 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAEPDVESIVRKLEEAISILR-TGKHDPWSFHNRVKKMYS 353 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecCCCHHHHHHHHHHHHhChh-hhhhHHHHHHHHHHhhCC
Confidence 999999999999994 899999999999988444333334499999999999998764 3334445555544 6688
Q ss_pred HHHHHHHHHHHHHHh
Q 002468 529 AQEWAETFVSELNDT 543 (918)
Q Consensus 529 ~~~W~~~fl~~l~~~ 543 (918)
+..-++++++-.+..
T Consensus 354 ~~~~~~~~~~~y~~l 368 (398)
T cd03796 354 WEDVAKRTEKVYDRI 368 (398)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888887777664
No 39
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.89 E-value=1.7e-21 Score=228.98 Aligned_cols=283 Identities=19% Similarity=0.148 Sum_probs=197.9
Q ss_pred HHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCCh---hhhhc---CCChHH--------HHH-HHHhC
Q 002468 205 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LLR-AVLAA 269 (918)
Q Consensus 205 ~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~---e~fr~---lP~~~~--------ll~-~ll~a 269 (918)
.+...+.+.|+||+|......++..+..+..+.|+.+..|--++.. +++.. .+..+. +.+ .+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455566789999998665555555544456789999999765421 22211 000111 111 12356
Q ss_pred CEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEE
Q 002468 270 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 349 (918)
Q Consensus 270 DlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~ 349 (918)
|.|...+........ .+| ....++.++|+|||.+.|.+.... ....+.++|++
T Consensus 246 d~Ii~~s~~~~~~~~-----~~g-----------~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI-----EDG-----------ADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH-----HcC-----------CCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 776665543322211 112 134578899999999988754210 11246789999
Q ss_pred EecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCC
Q 002468 350 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 429 (918)
Q Consensus 350 VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 429 (918)
+||+.+.||+..+++|++.+.++.|++ .|+++|... +-..+.+++++++.+++.. ..|. |.|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-----~~~~~~~e~~~li~~l~l~------~~V~-f~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-----EDPEYAEECRELVESLGLE------DNVK-FTG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-----cChHHHHHHHHHHHHhCCC------CeEE-EcC--
Confidence 999999999999999999998888864 577676421 1123456677777766432 1355 456
Q ss_pred CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccC--------CeEEECCCCHHHHHHH
Q 002468 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 501 (918)
Q Consensus 430 ~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~--------~allVnP~D~~~lA~a 501 (918)
.+++..+|+.||++|+||..|||+++++|||||+ .|+|+|+.+|+.+.+.. +|++|+|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999995 89999999999888743 7999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Q 002468 502 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 538 (918)
Q Consensus 502 i~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 538 (918)
|.++++++ +.+.++.++.++++.+ +++...++.|.+
T Consensus 436 i~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999864 5777778888888865 465666666543
No 40
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.89 E-value=1.1e-22 Score=212.15 Aligned_cols=194 Identities=22% Similarity=0.375 Sum_probs=146.2
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEE
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 653 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i 653 (918)
||++||||||++. ....++++++++|++|+++ +..|+|+|||+...+..+++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~-------------~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDP-------------NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCC-------------CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 5899999999985 1246899999999999984 6999999999999999999988889999999999
Q ss_pred EecCC-eeeeeccccCChHHH---HHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCC-
Q 002468 654 RCTTG-KWMTTMPEHLNMEWV---DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 728 (918)
Q Consensus 654 ~~~~~-~w~~~~~~~~~~~w~---~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~- 728 (918)
+..++ .|.. +......|. +.+..++..+....++..+|.+...+.+||+.... ......++...+ .....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 86433 2332 111111111 23344455555667888889999999999987511 111223344444 33221
Q ss_pred CCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 729 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 729 ~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
...+.++ .+..++||+|++++||.|++.++++++ ++.+++++||| +.||++||+.+..
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 689999999999999999999999988 57899999999 9999999999864
No 41
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.89 E-value=5.1e-21 Score=216.99 Aligned_cols=232 Identities=16% Similarity=0.169 Sum_probs=172.5
Q ss_pred hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCe
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 345 (918)
Q Consensus 268 ~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 345 (918)
.+|.+...+....+.+.. .++. ...++.++|+|||.+.|.+..... ....+..+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~~-----------~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVKV-----------PPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcCC-----------ChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCe
Confidence 367777777766555432 1121 235678899999998886542111 11111222 3577
Q ss_pred EEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEe
Q 002468 346 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 425 (918)
Q Consensus 346 vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 425 (918)
+|+++||+++.||+..+++|+..+++++|+...++.|+++|. ++.. +++++.+.+.+. ...++|
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999999887655688888863 3322 334444444322 234456
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHH
Q 002468 426 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 503 (918)
Q Consensus 426 ~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~ 503 (918)
.|. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 674 5789999999999999999999999999999995 899999999999988 56799999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 504 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 504 ~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
++++++ +++..+.+++++++ ..+++...++.+++-...
T Consensus 334 ~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999854 56777777888887 678888888777765543
No 42
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=1.2e-20 Score=212.25 Aligned_cols=275 Identities=17% Similarity=0.134 Sum_probs=194.2
Q ss_pred HHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCC--hhhhhcCCC--hHHHHHH-HHhCCEEeEeCHHHH
Q 002468 206 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLRA-VLAADLVGFHTYDYA 280 (918)
Q Consensus 206 i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs--~e~fr~lP~--~~~ll~~-ll~aDlIgf~t~~~~ 280 (918)
+++..+ .|+||+|+.+..+....+.+ ..++|+.+.+|..... .......++ ...+.+. +..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 58999997664443333333 2467888888843211 111111111 1222222 346899988887555
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~ 360 (918)
+.+.. .+. ...++.++|+|+|.+.|.+... ..+.++|+++||+.+.||+.
T Consensus 155 ~~~~~-----~~~-----------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLA-----LGF-----------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHH-----cCC-----------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 54432 121 2346788999999988764311 12467899999999999999
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
.+++|+..+.+++|++ .|+++|. ++. .+++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998887764 5777763 332 23455555543211 1244 6899999999999999
Q ss_pred ccEEEECCC------CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 441 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 441 ADv~vv~Sl------~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999994 899999999998887 56899999999999999999999854 46
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHH
Q 002468 513 REKRHWHNFTHV-TTHTAQEWAETFV 537 (918)
Q Consensus 513 r~~r~~~~~~~v-~~~~~~~W~~~fl 537 (918)
+.++..++++++ ..+++..+++.+.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777777788877 5688888877664
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.88 E-value=1.6e-20 Score=217.37 Aligned_cols=273 Identities=18% Similarity=0.191 Sum_probs=184.3
Q ss_pred CCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcC-------------CChH--HH-----------HH--
Q 002468 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------LR-- 264 (918)
Q Consensus 213 ~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~l-------------P~~~--~l-----------l~-- 264 (918)
+|+|..|--+...+| +.+..+++|+++.+|.|..+.+.+..+ ..+. .+ +.
T Consensus 108 pDv~i~~~g~~~~~~--~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTYP--LVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHHH--HHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 575544432333232 444566889999999665455544221 1111 01 11
Q ss_pred HHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 002468 265 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 344 (918)
Q Consensus 265 ~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 344 (918)
.+-.||.|...+.....+|.+ ..+ ...++.++|+|||.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~~------------~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LWK------------RNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----HhC------------cCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 234678777776544444322 111 1136788999999988764311 012356
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 423 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 423 (918)
.+|++|||+.+.||+..+|+||..+.+.+|+.. .++.|+++|..... +..++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998887521 24778888753211 1123455666776665421 1355
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHH
Q 002468 424 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 497 (918)
Q Consensus 424 ~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~-~l-----g~~allVnP~D~~~ 497 (918)
|.|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5789999999999999999999999999999999999994 7899999888654 34 45789974 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 002468 498 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 531 (918)
Q Consensus 498 lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 531 (918)
+|++|.++++++++++..+.+..++..+.++...
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999987666655444445456665443
No 44
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.88 E-value=1.8e-20 Score=209.29 Aligned_cols=276 Identities=21% Similarity=0.259 Sum_probs=195.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHH-HhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-LAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~l-l~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
..|+||+|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.|+..
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~---- 148 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIAS---- 148 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHhc----
Confidence 46899999999888888887776777888878864321110 11111111 12455555555444444321
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
.+ -...++.++|+|+|...|.+.. .....+++++ +++++++++||+.+.||+..+++|+.
T Consensus 149 ~~-----------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~ 211 (360)
T cd04951 149 KA-----------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFA 211 (360)
T ss_pred cC-----------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHH
Confidence 00 0234688999999998876432 1223345554 36789999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
++.+++|++ .|+++|. ++...+ +.+.+.+.+.. ..|. +.|.+ +++..+|+.||++++|
T Consensus 212 ~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 212 KLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVK-LLGLR--DDIAAYYNAADLFVLS 269 (360)
T ss_pred HHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEE-Eeccc--ccHHHHHHhhceEEec
Confidence 998888764 5776763 333233 33444443321 1254 45654 6789999999999999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 527 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 527 (918)
|..||||++++|||||+ .|+|+|+.+|..+.+.++|++++|.|++++|++|.++++++++.+..+........+.+
T Consensus 270 s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 345 (360)
T cd04951 270 SAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKF 345 (360)
T ss_pred ccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999995 89999999999888866899999999999999999999877766666655533345789
Q ss_pred CHHHHHHHHHHHH
Q 002468 528 TAQEWAETFVSEL 540 (918)
Q Consensus 528 ~~~~W~~~fl~~l 540 (918)
++..+++.+++-+
T Consensus 346 s~~~~~~~~~~~y 358 (360)
T cd04951 346 SINSIVQQWLTLY 358 (360)
T ss_pred CHHHHHHHHHHHh
Confidence 9999988887654
No 45
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.88 E-value=2.1e-20 Score=212.85 Aligned_cols=283 Identities=17% Similarity=0.163 Sum_probs=189.5
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHH---------HHHhCCEEeEeCHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR---------AVLAADLVGFHTYDYAR 281 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~---------~ll~aDlIgf~t~~~~~ 281 (918)
...|+|++|+..... + +++... ..++.+..|.| .........+.+.+.+ .+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999998865432 2 233333 37899999954 2211111111111111 13357888776654433
Q ss_pred HHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHH
Q 002468 282 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 361 (918)
Q Consensus 282 ~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~ 361 (918)
.+.. .++.. ....+.++|+|||.+.|.+....+ ........++..+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~~----------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPSL----------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhccc----------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 11100 112235889999999887542211 0011112356788999999999999999
Q ss_pred HHHHHHHHHHhC---cCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHh-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002468 362 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 437 (918)
Q Consensus 362 ~L~Af~~ll~~~---P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~g~v~~~el~al 437 (918)
+|+|++++.+++ |+ +.|+++|.+... .+....+.+++++++.+ .+.. ..|+ |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998876 54 568877753321 12222344556666655 3211 1355 5799999999999
Q ss_pred HHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 002468 438 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 515 (918)
Q Consensus 438 y~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~ 515 (918)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++.+ +.+.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 999999999999999999999999994 899999999988888 457899977 9999999999999976 46777
Q ss_pred HHHHHHHHH-HhcCHHHHHHH
Q 002468 516 RHWHNFTHV-TTHTAQEWAET 535 (918)
Q Consensus 516 r~~~~~~~v-~~~~~~~W~~~ 535 (918)
+.++.++++ ..+++...++.
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 777788876 55777766553
No 46
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.88 E-value=2.7e-20 Score=215.78 Aligned_cols=285 Identities=11% Similarity=0.026 Sum_probs=188.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeE-EEEEcCCCCChhhhhcCCChHHHH----HHHHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLL----RAVLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I-~~flH~PfPs~e~fr~lP~~~~ll----~~ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
..|+||.|++...+++.+..... ..|+ ....|. ++... ++.++ ..+..++++.-.+. ++.+....
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v 349 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-FMSNNHCV 349 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-hhhccHHH
Confidence 46999999999877766665544 4444 444665 32211 11111 12344555443332 33332221
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
.+.+... +.-...+|.++|||||++.|.+....+ ......++..+ .+..+|++|+|+.+.||...+|+|
T Consensus 350 ~~~l~~~--------lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A 419 (578)
T PRK15490 350 TRHYADW--------LKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDF 419 (578)
T ss_pred HHHHHHH--------hCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHH
Confidence 1211100 111356789999999999987643211 01111222223 345688899999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
+.++++++|++ .|+++|. ++. ++++++++.+.+.. ..|+ |.|+ .+++..+|+.||+||
T Consensus 420 ~a~llk~~pdi----rLvIVGd-----G~~----~eeLk~la~elgL~------d~V~-FlG~--~~Dv~~~LaaADVfV 477 (578)
T PRK15490 420 AARYLQHHPAT----RFVLVGD-----GDL----RAEAQKRAEQLGIL------ERIL-FVGA--SRDVGYWLQKMNVFI 477 (578)
T ss_pred HHHHHhHCCCe----EEEEEeC-----chh----HHHHHHHHHHcCCC------CcEE-ECCC--hhhHHHHHHhCCEEE
Confidence 99999988874 4777763 443 34455555554321 1355 5676 468999999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNF 521 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~--~~er~~r~~~~~ 521 (918)
+||.+|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.++.+
T Consensus 478 lPS~~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~AR 553 (578)
T PRK15490 478 LFSRYEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQ 553 (578)
T ss_pred EcccccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999995 899999999999987 78999999999999998874433221 123445567778
Q ss_pred HHH-HhcCHHHHHHHHHHHHHH
Q 002468 522 THV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 522 ~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
+++ +.|++..-.+.+++.++.
T Consensus 554 e~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 554 SFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHhhCCHHHHHHHHHHHHHh
Confidence 877 568888888888776654
No 47
>PLN02949 transferase, transferring glycosyl groups
Probab=99.87 E-value=5.3e-20 Score=214.67 Aligned_cols=314 Identities=16% Similarity=0.162 Sum_probs=208.6
Q ss_pred HHHHhhHhhhcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEeCCcc-chHHHHHHhhCCCCeEE
Q 002468 162 YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVG 240 (918)
Q Consensus 162 f~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL-~llp~~lr~~~~~~~I~ 240 (918)
+-..-.||-||-+.. .+...|.++..+.+ +. |.|||-.--. ..+| ++| ...+||+
T Consensus 109 ~~~~~~~~~~t~~~~----------~~~~~~l~~~~~~~---------~~--p~v~vDt~~~~~~~p-l~~--~~~~~v~ 164 (463)
T PLN02949 109 WIEEETYPRFTMIGQ----------SLGSVYLAWEALCK---------FT--PLYFFDTSGYAFTYP-LAR--LFGCKVV 164 (463)
T ss_pred ccccccCCceehHHH----------HHHHHHHHHHHHHh---------cC--CCEEEeCCCcccHHH-HHH--hcCCcEE
Confidence 345556777775421 23334666643332 12 3578844221 1222 344 2378999
Q ss_pred EEEcCCCCChhhhhcCCC-------------------hHHH-------HHH--HHhCCEEeEeCHHHHHHHHHHHHHHhc
Q 002468 241 WFLHTPFPSSEIHRTLPS-------------------RSDL-------LRA--VLAADLVGFHTYDYARHFVSACTRILG 292 (918)
Q Consensus 241 ~flH~PfPs~e~fr~lP~-------------------~~~l-------l~~--ll~aDlIgf~t~~~~~~Fl~~~~r~lg 292 (918)
+..|.|.-+.+....+-. .+.+ +.. +..||.|...+.-..+++. +..+
T Consensus 165 ~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~----~~~~ 240 (463)
T PLN02949 165 CYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIE----ALWR 240 (463)
T ss_pred EEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHH----HHcC
Confidence 999988767654332210 0000 111 2356777766654444432 1111
Q ss_pred cccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHh
Q 002468 293 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 372 (918)
Q Consensus 293 ~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~ 372 (918)
...++.++++|+|.+.|..... ....+++++++|||+.+.||+..+|+||.+++++
T Consensus 241 ------------~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~ 296 (463)
T PLN02949 241 ------------IPERIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEK 296 (463)
T ss_pred ------------CCCCeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHh
Confidence 1235678899999877632110 0113467899999999999999999999998875
Q ss_pred CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcc
Q 002468 373 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDG 452 (918)
Q Consensus 373 ~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG 452 (918)
.++-..++.|+++|... . ++..++.+++++++.+.+.. + .|. |.|.++.+++.++|+.||++|.||..||
T Consensus 297 ~~~~~~~~~LvIvG~~~-~--~~~~~~~~eL~~la~~l~L~----~--~V~-f~g~v~~~el~~ll~~a~~~v~~s~~E~ 366 (463)
T PLN02949 297 LDADVPRPKLQFVGSCR-N--KEDEERLQKLKDRAKELGLD----G--DVE-FHKNVSYRDLVRLLGGAVAGLHSMIDEH 366 (463)
T ss_pred ccccCCCcEEEEEeCCC-C--cccHHHHHHHHHHHHHcCCC----C--cEE-EeCCCCHHHHHHHHHhCcEEEeCCccCC
Confidence 44222246688887532 1 11223345566666654321 1 255 5689999999999999999999999999
Q ss_pred CChhHHHHHHhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 002468 453 MNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT 526 (918)
Q Consensus 453 ~nLv~lEamA~~~~~~g~lIlSe~aG~~~-~l-----g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~ 526 (918)
||++++|||||+ .|+|++..+|..+ .+ |.+|++++ |++++|++|.+++++++++++++.++.++.+.+
T Consensus 367 FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 367 FGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred CChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999994 7999999998753 33 34688874 999999999999998878888888889999999
Q ss_pred cCHHHHHHHHHHHHHHh
Q 002468 527 HTAQEWAETFVSELNDT 543 (918)
Q Consensus 527 ~~~~~W~~~fl~~l~~~ 543 (918)
+++..-++++++.+...
T Consensus 441 FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 441 FSEQRFNEDFKDAIRPI 457 (463)
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 99988888887776654
No 48
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.87 E-value=1.1e-19 Score=204.66 Aligned_cols=276 Identities=16% Similarity=0.170 Sum_probs=192.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhC---CCCeEEEEEcCCCCChhhhhcCCChHH-HHHHHHhCCEEeEeCHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRSD-LLRAVLAADLVGFHTYDYARHFVSAC 287 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~---~~~~I~~flH~PfPs~e~fr~lP~~~~-ll~~ll~aDlIgf~t~~~~~~Fl~~~ 287 (918)
..|+|++|++....++.++.... .+.++.+.+|-.-.. ....-+.... +...+..+|.|...+......+..
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-- 159 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYE-- 159 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHH--
Confidence 46899999876555555544322 267888888843111 1111122222 233456799999998876665543
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHH
Q 002468 288 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 364 (918)
Q Consensus 288 ~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~ 364 (918)
..+ ...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 160 --~~~------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 160 --LFD------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred --hcC------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 111 1235789999999987754321 1122333 46789999999999999999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|++.+.++ ++ +.|+++|.+ +....+ ++++.+.+. . ..|+ +.|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~----~~~~~~~~~----~--~~v~-~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPA----ERLARELGL----Q--DDVL-FLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHH----HHHHHHcCC----C--ceEE-EecCc--ccHHHHHHhcCEE
Confidence 99987654 32 446766642 222333 344443321 1 1255 45654 5799999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|..+++++ +++.++..++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999999888 56899999999999999999999854 566777777787
Q ss_pred H-HHhcCHHHHHHHHHHHHH
Q 002468 523 H-VTTHTAQEWAETFVSELN 541 (918)
Q Consensus 523 ~-v~~~~~~~W~~~fl~~l~ 541 (918)
. ...+++...++.+++-++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 350 RAAERFDSERIVPQYEALYR 369 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHH
Confidence 7 567888888888776554
No 49
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.87 E-value=5.1e-20 Score=205.75 Aligned_cols=266 Identities=20% Similarity=0.221 Sum_probs=191.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|..+...+..++.+ ..++|+.+.+|-.++.... .. ..+..+|.+.+.+....+.+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~---~~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YN---AIMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HH---HHHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 469999998776555554443 3478999999976643321 11 224568988887765544443 222
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 368 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~~ 368 (918)
+. ...++.++|+|||...|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 22 234688899999998886543211 1222244444 367789999999999999999999999
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 448 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~S 448 (918)
+.+.+++ +.|+++|... ....+.+.+.+.+.+.+.. ..|. +.|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~-~~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVT-FVGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEE-EcCC--cccHHHHHHhCCEEEecC
Confidence 9887665 4577777532 2223444454454443211 1255 4566 678999999999999999
Q ss_pred -CCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 449 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 449 -l~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|+++++++|..++...++++.++.+++++.+.
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999995 899999999988887 347999999999999999998888778888888888888886
Q ss_pred hc
Q 002468 526 TH 527 (918)
Q Consensus 526 ~~ 527 (918)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 53
No 50
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.87 E-value=9.5e-20 Score=214.43 Aligned_cols=274 Identities=15% Similarity=0.090 Sum_probs=187.1
Q ss_pred cCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChh-hhhcCC-C---hHHHHHHHHhCCEEeEeCHHHHHHHH
Q 002468 210 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE-IHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 210 ~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e-~fr~lP-~---~~~ll~~ll~aDlIgf~t~~~~~~Fl 284 (918)
..++|+|+++-.+... +.. .+..+.+++..++|.-.-... .-...+ | -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~-~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAV-LENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHH-HhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4567998886655443 333 355678999999996421110 000000 1 11223444457888877765444433
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 364 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~ 364 (918)
..... +.+...+|.++|+|++...+.+. .......|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 11234568899999876544321 0123467999999999999999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|+.++.+++|++ .|+++|. +++. +++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999999875 4776763 3433 3455665554321 1 244 56764 577899999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCC-Cchhhc--cCCeEEECC----CC----HHHHHHHHHHHhcCCHHHH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 513 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a-G~~~~l--g~~allVnP----~D----~~~lA~ai~~aL~m~~~er 513 (918)
|+||.+||||++++|||||+ .|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 899999986 777777 788999984 33 8899999999994 3467
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 514 EKRHWHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 514 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
.++.++.++.++.+++..-++.+.+-++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7788888888888888877777665544
No 51
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.86 E-value=1.4e-19 Score=208.60 Aligned_cols=285 Identities=14% Similarity=0.123 Sum_probs=198.0
Q ss_pred CCCCEEEEeCCccchH--HHHHHhhCCCCeEEEEEcCCCCChhhhh-cC--CChHH----HHHH-HHhCCEEeEeCHHHH
Q 002468 211 KDGDVVWCHDYHLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHR-TL--PSRSD----LLRA-VLAADLVGFHTYDYA 280 (918)
Q Consensus 211 ~~~DiIwvHDyhL~ll--p~~lr~~~~~~~I~~flH~PfPs~e~fr-~l--P~~~~----ll~~-ll~aDlIgf~t~~~~ 280 (918)
.+.|+||+|...++.. ...+++ ..+.++.+..|--||..-.-. .. +.... +.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 4579999998665432 223333 345677777775554321100 01 11011 1122 336899988888766
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccC
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 357 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~K 357 (918)
+.+.+ .+. ...++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~~-----------~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KGV-----------AAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cCC-----------CcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65532 121 2357889999999998875421 1 122345555 3567899999999999
Q ss_pred CHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002468 358 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 437 (918)
Q Consensus 358 Gi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 437 (918)
|+..+++|++.+ +++|+ +.|+++|. ++.. +++++++.+.+. ..|+ |.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~-f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVH-FLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceE-EeCCCCHHHHHHH
Confidence 999999999876 44554 55777753 4433 344455544322 1365 5789999999999
Q ss_pred HHHccEEEECCCCccCC----hhHHHHHHhcCCCCceEEEeCCCCc--hhhccCCeEEECCCCHHHHHHHHHHHhcCCHH
Q 002468 438 YAVTDVALVTSLRDGMN----LVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 511 (918)
Q Consensus 438 y~~ADv~vv~Sl~EG~n----Lv~lEamA~~~~~~g~lIlSe~aG~--~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~ 511 (918)
|+.||++|+||..|+++ ...+|||||+ .|+|+|..+|. .+.+..+|++|+|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 99999999999999954 4579999994 89999988774 355556899999999999999999999865 5
Q ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhH
Q 002468 512 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 544 (918)
Q Consensus 512 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 544 (918)
++..+.++.++++. .+++...++.|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77788888888875 6899999999988887653
No 52
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.86 E-value=6.7e-20 Score=221.20 Aligned_cols=280 Identities=14% Similarity=0.075 Sum_probs=183.2
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEE-EEcCCC--CChhhhhcCCChHHHHHHHHhCCEEeEe--CHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPF--PSSEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~-flH~Pf--Ps~e~fr~lP~~~~ll~~ll~aDlIgf~--t~~~~~~Fl~~ 286 (918)
..|||++|.+.-..+..+..+.. .+|+.+ .+|+-. ...+.++. ....+...+..++.+.+. +....+.|..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRTMPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCCCccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 46999999988877777666543 455544 556521 11121110 011122333334433333 2222222221
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc-CCeEEEEEecccccCCHHHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
.++. ...+|.++|+|||++.|.+. +........++.... +.++|++|||+++.||+..+|+|
T Consensus 476 ---~~g~-----------~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A 538 (694)
T PRK15179 476 ---WLGV-----------DERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA 538 (694)
T ss_pred ---HcCC-----------ChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH
Confidence 1221 34578899999999888642 111111122222222 45688999999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
|..+++++|++ .|+++|. ++. ++++++++.+.+.. ..|+ |.|.. +++..+|+.||+||
T Consensus 539 ~a~l~~~~p~~----~LvIvG~-----G~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~V 596 (694)
T PRK15179 539 AQRFAASHPKV----RFIMVGG-----GPL----LESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAFL 596 (694)
T ss_pred HHHHHHHCcCe----EEEEEcc-----Ccc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEEE
Confidence 99999999875 4777764 332 34455566554321 1244 67775 47899999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH--HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~--~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
+||.+|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.++.+
T Consensus 597 lpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~ar 671 (694)
T PRK15179 597 LLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKAA 671 (694)
T ss_pred eccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHHH
Confidence 9999999999999999994 899999999999988 568999998875 689999999887543 2233445667
Q ss_pred HHH-HhcCHHHHHHHHHHH
Q 002468 522 THV-TTHTAQEWAETFVSE 539 (918)
Q Consensus 522 ~~v-~~~~~~~W~~~fl~~ 539 (918)
+++ +.|++..-++.+++-
T Consensus 672 ~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 672 DWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHhCCHHHHHHHHHHH
Confidence 776 567777766666543
No 53
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.86 E-value=5.9e-20 Score=205.45 Aligned_cols=251 Identities=18% Similarity=0.066 Sum_probs=172.3
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHH-HHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
+.|+|++|..+...++.++.+......+.+..|..+...+.+........+. ..+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 5799999998876777766665555556677787654433222211100111 12334677766665544443220
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
....++.++|+|||.+.|..... ..+. ++.+ .++.+|+++||+++.||+..+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 11346889999999988765321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
.+.+++|++ .|+++|. ++....++ +.+.+.+. . ..|+ +.|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~----~~~~~~~~----~--~~v~-~~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIK----KKVKELGL----E--DKVI-FLGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHH----HHHHhcCC----C--CcEE-Eecc--cCCHHHHHHhcCEEEec
Confidence 999988874 5777763 33333333 33333221 1 1354 4565 67899999999999999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~-~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
|..||||++++|||||+ .|+|+|+.+|..+.++. .+++..+.+++++|++|.++++++...
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~ 335 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRE 335 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchh
Confidence 99999999999999994 89999999999998854 345555667899999999999988643
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.86 E-value=2.6e-20 Score=207.28 Aligned_cols=276 Identities=20% Similarity=0.200 Sum_probs=199.9
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCCh--hhhhc---CCChHHHHHHHHhCCEEeEeCHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~--e~fr~---lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
...|+||+|++..... +....++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+....+.+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 5679999999877765 456788889899654421 11110 011223344566889999888766665543
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHH
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
. .+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~~-----------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LGV-----------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hCc-----------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 111 2346789999999987764321 11 1111223577899999999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
+..+.+.+|+ +.|+++|.... .+......+ .+. +. ...+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGW----LNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCcc----ccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999888774 45776764321 111122222 111 11 12334689999999999999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
+||..||||++++|||+|+ .|+|+|+.+|..+.++.++++++|.|+++++++|.++++. ++.+..+.++.++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999994 7999999988888888889999999999999999999875 4577777788888889
Q ss_pred hcCHHHHHHHHH
Q 002468 526 THTAQEWAETFV 537 (918)
Q Consensus 526 ~~~~~~W~~~fl 537 (918)
.+++..+++.++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999988775
No 55
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.86 E-value=1.1e-19 Score=201.44 Aligned_cols=278 Identities=17% Similarity=0.189 Sum_probs=186.2
Q ss_pred cCCCCEEEEeCCccc-hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH------HHHHHhCCEEeEeCHHHHHH
Q 002468 210 YKDGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 282 (918)
Q Consensus 210 ~~~~DiIwvHDyhL~-llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l------l~~ll~aDlIgf~t~~~~~~ 282 (918)
....|+|++|+.... ..+.....+..+.++.+..|..++....... +....+ -..+..+|.|.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 346799999984332 2222222223467888888876654321000 011111 11133567777766443322
Q ss_pred HHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCH
Q 002468 283 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 283 Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi 359 (918)
... .+...++.++|+|+|.+.|...... . . ++.+ .++++|+++||+++.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~---~----~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPSR---G----R-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchhh---h----h-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 211 1124568899999999888643210 0 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 439 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 439 (918)
..+++|+..+.+++|++ .|+++|... +.+. ..++.++.+.+. . ..|. +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALGL----E--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHHh
Confidence 99999999999887764 477676421 1221 222333333221 1 1244 689999999999999
Q ss_pred HccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 002468 440 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEEREKRHW 518 (918)
Q Consensus 440 ~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~-~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~ 518 (918)
.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+.. .++++ |.|.++++++|.++++++ ++++.+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999995 89999999999888843 44555 556699999999999987 67777788
Q ss_pred HHHHH-HHhcCHHHHHHHHH
Q 002468 519 HNFTH-VTTHTAQEWAETFV 537 (918)
Q Consensus 519 ~~~~~-v~~~~~~~W~~~fl 537 (918)
+.++. .+.+++..-++.++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 57777777766654
No 56
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.85 E-value=3.7e-19 Score=205.23 Aligned_cols=272 Identities=14% Similarity=0.087 Sum_probs=191.0
Q ss_pred CCCEEEEeCCccch-HHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHH-HHhCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~l-lp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
+.|+++.|-++... ...++++.....++....|-.....+.+ .+....+.+. +-.+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 45677666544433 3345566555556777788432111111 1111122222 34789999988766554432
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~l 369 (918)
.++ ....++.++|+|+|...+.+.. ...+...|+++||+.+.||++.+++|+.++
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 222 1234678999999987664320 113567899999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH--ccEEEEC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 447 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~--ADv~vv~ 447 (918)
.+.+|+. ++.++.+|. ++.... +++++.+.+. . ..|. |.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~--~l~~~iiG~-----g~~~~~----l~~~~~~~~~----~--~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSI--KIKWTHIGG-----GPLEDT----LKELAESKPE----N--ISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCc--eEEEEEEeC-----chHHHH----HHHHHHhcCC----C--ceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 9998876 366776663 333333 4444432211 0 1354 6899999999999986 7899999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECC-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTHV 524 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP-~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v 524 (918)
|..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++.++.++.+
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999995 899999999999988 446899987 4899999999999985 467888888888887
Q ss_pred -HhcCHHHHHHHHH
Q 002468 525 -TTHTAQEWAETFV 537 (918)
Q Consensus 525 -~~~~~~~W~~~fl 537 (918)
+.+++..+.+.|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6788888877775
No 57
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.85 E-value=2.6e-19 Score=199.32 Aligned_cols=280 Identities=21% Similarity=0.198 Sum_probs=192.1
Q ss_pred CCCEEEEeCCccch---HHHHHHh--hCCCCeEEEEEcCCCCChhhhhcCCChHHHHH-HHHhCCEEeEeCHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMF---LPKCLKE--YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 212 ~~DiIwvHDyhL~l---lp~~lr~--~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~-~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
..|+|++|+++-.. ....+.. ...+.++.+.+|...+.... .....+.+ .+..+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 46899998733211 1111111 23678999999986222111 11122222 245789999987444444432
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHH
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 365 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~A 365 (918)
. ....++.++|+|+|...+..... . +. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~------~-~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES------L-KA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh------h-Hh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0 01247889999999877653311 0 11 1122467899999999999999999999
Q ss_pred HHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 366 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 366 f~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
++.+.+++|+ +.|+++|... +..........+++.+.+. . ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~----~~l~i~G~~~----~~~~~~~~~~~~~i~~~~~----~--~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPD----VRLLVAGETH----PDLERYRGEAYALAERLGL----A--DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCC----eEEEEeccCc----cchhhhhhhhHhHHHhcCC----C--CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 9999888776 4577776422 1111111110022333221 1 23665555599999999999999999
Q ss_pred ECCCCc--cCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 446 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 446 v~Sl~E--G~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
+||..| |++++++|||||+ .|+|+|+.+| .+.+ +.+|++++|.|++++|++|.++++++ +.+.++.++.+
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999995 7999999988 6666 56799999999999999999999865 46677778888
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 002468 522 THVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 522 ~~v~~~~~~~W~~~fl~~l 540 (918)
+++.++++..+++.+++-+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999998887644
No 58
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.85 E-value=2.8e-20 Score=202.92 Aligned_cols=191 Identities=15% Similarity=0.199 Sum_probs=125.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.+..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 479999999999986 34699999999999987 699999999999999999998874 4689999
Q ss_pred ceEEEe-cCCe-eeeeccccCChHHHHHHHHHHHHHHhc--------CCCceeeeccce-------EEEEeeccChh---
Q 002468 650 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-------LVWNYKYADVE--- 709 (918)
Q Consensus 650 Ga~i~~-~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~--------~~Gs~iE~K~~s-------l~~hyr~ad~e--- 709 (918)
|+.+.. .++. +.. ..+ .+.+.++++..... ..+.+....... ..+.+...+.+
T Consensus 67 Ga~I~~~~~~~l~~~----~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQ----DLP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEee----cCC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999984 3322 222 223 23444444332211 011111000000 00000000000
Q ss_pred ---h-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEe
Q 002468 710 ---F-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 710 ---~-------~~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiG 778 (918)
. ......++...+ ...+. ..+.+. ++..++||.|+|+|||.||++|++++| ++.++++|||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 0 001122333334 22222 235544 456799999999999999999999999 6789999999
Q ss_pred cCCCCcHHHHHHcCc
Q 002468 779 HFLGKDEDVYAFFEP 793 (918)
Q Consensus 779 D~d~nDedMf~~~~~ 793 (918)
| +.||.+||+.++.
T Consensus 212 D-~~NDi~Ml~~ag~ 225 (272)
T PRK15126 212 D-AMNDREMLGSVGR 225 (272)
T ss_pred C-CHHHHHHHHHcCC
Confidence 9 9999999999953
No 59
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.85 E-value=2.2e-20 Score=202.74 Aligned_cols=194 Identities=16% Similarity=0.249 Sum_probs=130.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc--eEEee
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 648 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l--~liae 648 (918)
..|+|++|+||||++. +..++++++++|++|.+ +|..|+|+|||++..+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 44599999999999886 6999999999999999999999954 69999
Q ss_pred CceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhc--CCCceeeeccceE------------EE-Ee----ecc---
Q 002468 649 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETSL------------VW-NY----KYA--- 706 (918)
Q Consensus 649 nGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~--~~Gs~iE~K~~sl------------~~-hy----r~a--- 706 (918)
||+++...++. +.....+ .+.+..+++..... ....+........ .. ++ ...
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975332 2212233 34455555544222 1111111110000 00 00 000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCc-EEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 707 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 707 d~------e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~-~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
+. ........++.+.+ ...+....+.+.++.. .+||.|+|+|||.|++.++++++ ++.++||||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011223333344 3333333456666654 49999999999999999999998 67889999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||.+||++++.
T Consensus 214 -~~ND~~Ml~~ag~ 226 (264)
T COG0561 214 -STNDIEMLEVAGL 226 (264)
T ss_pred -ccccHHHHHhcCe
Confidence 9999999999976
No 60
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.85 E-value=4.1e-19 Score=206.01 Aligned_cols=304 Identities=13% Similarity=0.118 Sum_probs=189.2
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCC------------------------hHHHHH--
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS------------------------RSDLLR-- 264 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~------------------------~~~ll~-- 264 (918)
.+.|++|.||++.-.....||++.++++..|+.|-. ++-|.|-. .+--++
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT----~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHAT----LLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEeccc----ccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 468999999999999999999888999999999943 33342110 000011
Q ss_pred HHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCC----chHHHHHH----
Q 002468 265 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 336 (918)
Q Consensus 265 ~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~----~~~~~~~~---- 336 (918)
....||.+..-+....+ -|..+++ +...+ |+|||||++.|.+..... ..++++.+
T Consensus 223 aa~~Ad~fttVS~it~~----E~~~Ll~------------~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITAY----EAEHLLK------------RKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHHH----HHHHHhC------------CCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 12334444433322111 1223333 23223 899999999987543111 11122222
Q ss_pred -HHHHh---cCCeEEEE-Eecccc-cCCHHHHHHHHHHHHHhCcCcc-CcEEEEEEEcCCCCCh---------HHHHHHH
Q 002468 337 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLT 400 (918)
Q Consensus 337 -lr~~~---~~~~vIl~-VdRLd~-~KGi~~~L~Af~~ll~~~P~~~-~kv~Lvqig~psr~~~---------~~y~~l~ 400 (918)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..-..-. +..|+..+..|+.... +-.++|+
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 34444 26778888 899999 9999999999998755211111 1123333445554331 2334566
Q ss_pred HHHHHHHHhhhcc--------------------------------------------------------------cC-CC
Q 002468 401 SQVHEIVGRINGR--------------------------------------------------------------FG-TL 417 (918)
Q Consensus 401 ~~l~~lv~~IN~~--------------------------------------------------------------~g-~~ 417 (918)
+.+..+..+|+.+ |. ..
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 6666665555544 10 01
Q ss_pred CcccEEEeCCCCC------HHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCch----hhcc---
Q 002468 418 TAVPIHHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG--- 484 (918)
Q Consensus 418 ~~~pV~~~~g~v~------~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~----~~lg--- 484 (918)
+.+.|+|...+++ ..+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.++
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~ 521 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPE 521 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCC
Confidence 2234444433333 2457889999999999999999999999999994 899999999984 4443
Q ss_pred CCeEEEC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 002468 485 AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 539 (918)
Q Consensus 485 ~~allVn-------P~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 539 (918)
..|++|. +.+++++|++|.+.+.++..++........+....++|.+-+..++..
T Consensus 522 ~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A 583 (590)
T cd03793 522 SYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKA 583 (590)
T ss_pred CceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3578887 456789999999999776443333333333556667776666666544
No 61
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.85 E-value=1.7e-19 Score=204.17 Aligned_cols=274 Identities=20% Similarity=0.159 Sum_probs=188.4
Q ss_pred HHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCC-CChhhhhcCCC---hHHHHHHHHhCCEEeEeCH
Q 002468 202 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTY 277 (918)
Q Consensus 202 fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~Pf-Ps~e~fr~lP~---~~~ll~~ll~aDlIgf~t~ 277 (918)
|.+.+.. .+..|+|.+|..+.... .+.......++..++|... .....-...++ .+.++..+..+|.|.+.+.
T Consensus 90 ~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 166 (372)
T cd04949 90 FLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATE 166 (372)
T ss_pred HHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccH
Confidence 4444443 46789999988776655 2223334555666777532 11110001111 2344555667899998887
Q ss_pred HHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccC
Q 002468 278 DYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 357 (918)
Q Consensus 278 ~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~K 357 (918)
.-.+.+.. .++ ...++.++|+|+|...+.+.. .....+..|+++||+.+.|
T Consensus 167 ~~~~~l~~----~~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K 217 (372)
T cd04949 167 QQKQDLQK----QFG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEK 217 (372)
T ss_pred HHHHHHHH----HhC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCccc
Confidence 66655543 111 112377899999988765421 0123567899999999999
Q ss_pred CHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002468 358 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 437 (918)
Q Consensus 358 Gi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 437 (918)
|+..+|+|+.++.+++|++ .|+++|.+ +....++ .++.+.+. .+ .|. +.|. .+++..+
T Consensus 218 ~~~~li~a~~~l~~~~~~~----~l~i~G~g-----~~~~~~~----~~~~~~~~----~~--~v~-~~g~--~~~~~~~ 275 (372)
T cd04949 218 QLDQLIKAFAKVVKQVPDA----TLDIYGYG-----DEEEKLK----ELIEELGL----ED--YVF-LKGY--TRDLDEV 275 (372)
T ss_pred CHHHHHHHHHHHHHhCCCc----EEEEEEeC-----chHHHHH----HHHHHcCC----cc--eEE-EcCC--CCCHHHH
Confidence 9999999999999999875 47766642 2222233 33333221 11 244 5663 4679999
Q ss_pred HHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCC-Cchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 002468 438 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 514 (918)
Q Consensus 438 y~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a-G~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~ 514 (918)
|+.||++|+||..||||++++|||+|+ .|+|+++.+ |..+.+ |.+|++|+|.|++++|++|..+|+++ +.+.
T Consensus 276 ~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~ 350 (372)
T cd04949 276 YQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQ 350 (372)
T ss_pred HhhhhEEEecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999999999999999994 799999877 777777 67899999999999999999999976 4667
Q ss_pred HHHHHHHHHHHhcCHHHHHH
Q 002468 515 KRHWHNFTHVTTHTAQEWAE 534 (918)
Q Consensus 515 ~r~~~~~~~v~~~~~~~W~~ 534 (918)
.+.++.++...++++..+++
T Consensus 351 ~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 351 KFSEAAYENAERYSEENVWE 370 (372)
T ss_pred HHHHHHHHHHHHhhHHHHHh
Confidence 77777887777777766654
No 62
>PRK10976 putative hydrolase; Provisional
Probab=99.85 E-value=6.7e-20 Score=199.10 Aligned_cols=193 Identities=16% Similarity=0.237 Sum_probs=124.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.+..++ .++|+.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 489999999999986 34689999999999996 799999999999999999888874 4689999
Q ss_pred ceEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhc---------CCCceeeeccc------e---EEEEeec---cCh
Q 002468 650 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER---------TPRSHFEQRET------S---LVWNYKY---ADV 708 (918)
Q Consensus 650 Ga~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~---------~~Gs~iE~K~~------s---l~~hyr~---ad~ 708 (918)
|+.+...++.. +.....+ .+.+.++++...+. ..+.++..... . ..+.... ...
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEP 141 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhccc
Confidence 99998533321 1111223 23444444433211 01111110000 0 0000000 000
Q ss_pred h-h--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEe
Q 002468 709 E-F--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 778 (918)
Q Consensus 709 e-~--------~~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiG 778 (918)
+ . ......++.+.+ ...+. ..+.+. .+..++||.|+|+|||.|+++|++++| ++.++++|||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viafG 213 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAFG 213 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEEc
Confidence 0 0 001112233333 22111 234543 456899999999999999999999999 6789999999
Q ss_pred cCCCCcHHHHHHcCc
Q 002468 779 HFLGKDEDVYAFFEP 793 (918)
Q Consensus 779 D~d~nDedMf~~~~~ 793 (918)
| +.||++||+.++.
T Consensus 214 D-~~NDi~Ml~~ag~ 227 (266)
T PRK10976 214 D-GMNDAEMLSMAGK 227 (266)
T ss_pred C-CcccHHHHHHcCC
Confidence 9 9999999999854
No 63
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.84 E-value=1.1e-19 Score=198.17 Aligned_cols=187 Identities=16% Similarity=0.172 Sum_probs=126.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc---eEEe
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 647 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l---~lia 647 (918)
..++||+|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+...+..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4789999999999975 34578999999999996 6999999999999999999998854 6999
Q ss_pred eCceEEEecCC-ee---eeeccccCChHHHHHHHHHHHHHHhcCCCcee--e-e----------------------ccce
Q 002468 648 ENGMFLRCTTG-KW---MTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--E-Q----------------------RETS 698 (918)
Q Consensus 648 enGa~i~~~~~-~w---~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E-~----------------------K~~s 698 (918)
+||+.+...++ .. ........+ .+.+.++++..... .+..+ . . ....
T Consensus 71 ~NGa~I~~~~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFPRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEAS 146 (271)
T ss_pred eCCCEEEecCcccCCCCceEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccC
Confidence 99999985322 10 001101122 23444444443221 01100 0 0 0000
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCC---CCceEE
Q 002468 699 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYVL 775 (918)
Q Consensus 699 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~---~~d~vl 775 (918)
..+.+.. ++ ....++.+.+ .. ..+.++.+..++||.|+|+|||.|+++|+++++ + +.++++
T Consensus 147 ~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~vi 210 (271)
T PRK03669 147 VTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTTL 210 (271)
T ss_pred ceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceEE
Confidence 0111110 11 1223344444 22 145666666799999999999999999999998 6 789999
Q ss_pred EEecCCCCcHHHHHHcCc
Q 002468 776 CIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 776 aiGD~d~nDedMf~~~~~ 793 (918)
|||| +.||++||++++.
T Consensus 211 afGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 211 GLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEcC-CHHHHHHHHhCCE
Confidence 9999 9999999999964
No 64
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.84 E-value=6.5e-19 Score=196.34 Aligned_cols=265 Identities=19% Similarity=0.170 Sum_probs=190.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|..+...+..++..+....+..+.+|.+..... +....+...+..+|.+...+....+.+.+ ..
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIR----LL 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4699999987665555555555557888888885421111 11123334455799999988876665543 11
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 2 1245788999999998876431 0112456789999999999999999999999887
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 450 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~- 450 (918)
.+|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 7665 557767642 222 233344444321 1233468999999999999999999999999
Q ss_pred -----ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 002468 451 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 523 (918)
Q Consensus 451 -----EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~ 523 (918)
|||+++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++ +++..+.++.++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 99999999999994 899999998888777 44799999999999999999999876 4566677777777
Q ss_pred HH-hcCHHHHH
Q 002468 524 VT-THTAQEWA 533 (918)
Q Consensus 524 v~-~~~~~~W~ 533 (918)
+. .|++...+
T Consensus 342 ~~~~~s~~~~~ 352 (355)
T cd03799 342 VEEEFDIRKQA 352 (355)
T ss_pred HHHhcCHHHHh
Confidence 74 46655544
No 65
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.84 E-value=9.4e-20 Score=193.38 Aligned_cols=182 Identities=12% Similarity=0.190 Sum_probs=121.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 589999999999976 34689999999999996 799999999999999998887774 4799999
Q ss_pred ceEEEec--CCeeeeeccccCChHHHHHHHHHHHHHHhcCCCc--eeeec--c--ceEEEEeeccChhhhHHHHHHHHHH
Q 002468 650 GMFLRCT--TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--E--TSLVWNYKYADVEFGRIQARDMLQH 721 (918)
Q Consensus 650 Ga~i~~~--~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--~iE~K--~--~sl~~hyr~ad~e~~~~~a~el~~~ 721 (918)
|+++... +..+.. .... .+..+++.+....+.. .+... . ......++..+ . .++.+.
T Consensus 68 Ga~i~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~ 132 (230)
T PRK01158 68 GGVISVGFDGKRIFL---GDIE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----V---EEVREL 132 (230)
T ss_pred CeEEEEcCCCCEEEE---cchH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----H---HHHHHH
Confidence 9999753 222211 1111 1222333222221111 11100 0 00011111111 1 112222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 722 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 722 L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+ +.. ...+.+..+...+||.|+++|||.|++.++++++ ++++++++||| +.||++||+.++.
T Consensus 133 l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 133 L-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred H-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 2 221 1245566666789999999999999999999998 67899999999 9999999999843
No 66
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.84 E-value=6.5e-20 Score=199.55 Aligned_cols=191 Identities=16% Similarity=0.238 Sum_probs=123.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc-----eEE
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 646 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l-----~li 646 (918)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+...+..+++ ++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I 67 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCI 67 (270)
T ss_pred eEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEE
Confidence 589999999999986 35689999999999987 6999999999999999999888753 589
Q ss_pred eeCceEEEe--cCCe-eeeeccccCChHHHHHHHHHHHHHHhc--------CCCceeeeccce-----------EEEEee
Q 002468 647 AENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-----------LVWNYK 704 (918)
Q Consensus 647 aenGa~i~~--~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~--------~~Gs~iE~K~~s-----------l~~hyr 704 (918)
+.||+.+.. .++. +... .+. +.+..+++..... ..+.++..+... +...+.
T Consensus 68 ~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (270)
T PRK10513 68 TNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFR 140 (270)
T ss_pred EcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCcccc
Confidence 999999984 2322 2222 232 2233333322111 111121111100 000000
Q ss_pred cc---Chh--h-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCC
Q 002468 705 YA---DVE--F-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 771 (918)
Q Consensus 705 ~a---d~e--~-------~~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~ 771 (918)
.. ++. . ......++.+.+ ...+. ..+.++ .+..++||.|+|+|||.|+++|+++++ ++.
T Consensus 141 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~ 212 (270)
T PRK10513 141 EVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKP 212 (270)
T ss_pred chhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCH
Confidence 00 000 0 001112222233 11111 235544 457799999999999999999999998 678
Q ss_pred ceEEEEecCCCCcHHHHHHcCc
Q 002468 772 DYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 772 d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++++|||| +.||++||+.++.
T Consensus 213 ~~v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 213 EEVMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred HHEEEECC-chhhHHHHHhCCc
Confidence 99999999 9999999999843
No 67
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.84 E-value=1.1e-18 Score=192.52 Aligned_cols=277 Identities=20% Similarity=0.199 Sum_probs=192.1
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCC-hHHHHHHH-HhCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-RSDLLRAV-LAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~-~~~ll~~l-l~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
..|+|++|+++.......+.......++.+..|..++... ...+. ...+..-+ ..+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 4699999999988777776665567888888887654421 00111 11121112 2456665555543333321
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 366 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L~Af 366 (918)
. +. ...++.++|+|+|...|.+.... ...+++++ .++.+|+++||+.+.||+..+++|+
T Consensus 154 ~-~~-----------~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 I-GY-----------PPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred c-CC-----------ChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 1 21 23467789999999887654221 12233334 3567889999999999999999999
Q ss_pred HHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH-hhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002468 367 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG-RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 445 (918)
Q Consensus 367 ~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~-~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 445 (918)
..+.+++|+ +.|+++|.+. ....++ .... .. +.. ..|. +.+. .+++..+|+.||+++
T Consensus 216 ~~l~~~~~~----~~l~i~G~~~-----~~~~~~----~~~~~~~----~~~--~~v~-~~g~--~~~~~~~~~~adi~v 273 (365)
T cd03807 216 ALLLKKFPN----ARLLLVGDGP-----DRANLE----LLALKEL----GLE--DKVI-LLGE--RSDVPALLNALDVFV 273 (365)
T ss_pred HHHHHhCCC----eEEEEecCCc-----chhHHH----HHHHHhc----CCC--ceEE-Eccc--cccHHHHHHhCCEEE
Confidence 999888776 4577676432 111222 2222 22 211 1244 4454 467999999999999
Q ss_pred ECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 446 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 446 v~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
+||..||||++++|||+|+ .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++..+.+++++.+.
T Consensus 274 ~ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (365)
T cd03807 274 LSSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIE 348 (365)
T ss_pred eCCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999994 89999999999888855799999999999999999999976 567777777887774
Q ss_pred -hcCHHHHHHHHHHH
Q 002468 526 -THTAQEWAETFVSE 539 (918)
Q Consensus 526 -~~~~~~W~~~fl~~ 539 (918)
.+++..-++.|++.
T Consensus 349 ~~~s~~~~~~~~~~~ 363 (365)
T cd03807 349 ENFSIEAMVEAYEEL 363 (365)
T ss_pred HhCCHHHHHHHHHHH
Confidence 57888877777654
No 68
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.84 E-value=7.9e-19 Score=194.79 Aligned_cols=271 Identities=20% Similarity=0.194 Sum_probs=188.4
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChH---------HHH-HHHHhCCEEeEeCHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLL-RAVLAADLVGFHTYDYAR 281 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~---------~ll-~~ll~aDlIgf~t~~~~~ 281 (918)
..|+|++|+...+........+..+.++.+.+|.+++. +....+... .+. ..+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 46899999875544333333334578899999988763 222212111 111 223468888888776444
Q ss_pred HHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCC
Q 002468 282 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 358 (918)
Q Consensus 282 ~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KG 358 (918)
.+.. . +...++.++|+|+|...|.+.... . .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----~------------~~~~~~~vi~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----Y------------GVKRPIEVIPTGIDLDRFEPVDGD----D----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----c------------CCCCceEEcCCccchhccCccchh----H----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1 122347899999999887653211 1 12222 35678999999999999
Q ss_pred HHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002468 359 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 438 (918)
Q Consensus 359 i~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 438 (918)
+..+++|++.+.++.++ +.|+++|. ++.. ..+++++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGD-----GPER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999999887665 55777763 2222 2344444433211 1244 67999999999999
Q ss_pred HHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 002468 439 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 516 (918)
Q Consensus 439 ~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r 516 (918)
+.||++++||..||+|++++|||+|+ .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .++.+
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 899999999988887 468999999888 99999999999874 45667
Q ss_pred HHHHHHHHHhcCHHHHHHHHHH
Q 002468 517 HWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 517 ~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
.++.++.+..++ |++.+.+
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~ 369 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEK 369 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHH
Confidence 777788887654 4444433
No 69
>PHA01633 putative glycosyl transferase group 1
Probab=99.84 E-value=8.8e-19 Score=195.17 Aligned_cols=195 Identities=17% Similarity=0.188 Sum_probs=145.1
Q ss_pred eeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCC
Q 002468 312 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 391 (918)
Q Consensus 312 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~ 391 (918)
+|+|||++.|.+.... ..+..+++...+++..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~~--~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEKL--VPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccchh--hHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 6789999998764210 1112222222235667899999999999999999999999999998765677776541
Q ss_pred ChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCc
Q 002468 392 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 469 (918)
Q Consensus 392 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g 469 (918)
.. +++ + +..+ .|+++. |.++.+++.++|+.||+||+||..||||++++|||||+ .
T Consensus 192 --~~-------~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~ 248 (335)
T PHA01633 192 --KQ-------FTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----T 248 (335)
T ss_pred --HH-------HHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----C
Confidence 11 111 1 1111 355432 67789999999999999999999999999999999995 7
Q ss_pred eEEEeCCCCchhhcc------------------C--CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 002468 470 VLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 529 (918)
Q Consensus 470 ~lIlSe~aG~~~~lg------------------~--~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 529 (918)
|+|+|..+|..+..| . .|++|+++|++++|++|.+++.+.. +..+..++++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcCH
Confidence 999999888777653 1 2457888999999999999988763 33445567788999998
Q ss_pred HHHHHHHH
Q 002468 530 QEWAETFV 537 (918)
Q Consensus 530 ~~W~~~fl 537 (918)
..-.++|+
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 88777664
No 70
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.84 E-value=1.7e-18 Score=190.10 Aligned_cols=282 Identities=22% Similarity=0.179 Sum_probs=201.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhh----cCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 287 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr----~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~ 287 (918)
..|+|++|+++...+.. +.....+.++.+.+|-+++...... ...........+..+|.+.+.+......+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 46999999999887765 3444678899999998876432110 00011122233556788888887666555431
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHH
Q 002468 288 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 288 ~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
. .....++.++|+|+|...+.+.. .. .........+++.|+++||+.+.||+..+++|+.
T Consensus 163 ---~-----------~~~~~~~~~i~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 163 ---G-----------GVPPEKITVIPNGVDTERFRPAP-----RA-ARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred ---C-----------CCCCCcEEEecCcccccccCccc-----hH-HHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 0 01124788999999998775421 00 0000011245678999999999999999999999
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
.+.+.+|+ +.|+++|. ++....++ +++.+.+.. ..|. +.|.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPD----VRLVIVGD-----GPLREELE----ALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCC----eEEEEEeC-----cHHHHHHH----HHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEEEec
Confidence 99887765 55777762 33333333 333332211 1344 57899999999999999999999
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THV 524 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~-~~v 524 (918)
+..||++++++|||+|+ .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++.+ +.++++.++.+ ...
T Consensus 283 ~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHH
Confidence 99999999999999994 899999999998888 46899999999999999999999875 45666666666 456
Q ss_pred HhcCHHHHHHHHHHHH
Q 002468 525 TTHTAQEWAETFVSEL 540 (918)
Q Consensus 525 ~~~~~~~W~~~fl~~l 540 (918)
+.+++..+++.+++-+
T Consensus 358 ~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 358 ERFSWDRVAARTEEVY 373 (374)
T ss_pred HhcCHHHHHHHHHHhh
Confidence 7889999888877643
No 71
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.83 E-value=1.1e-18 Score=201.13 Aligned_cols=187 Identities=15% Similarity=0.076 Sum_probs=129.1
Q ss_pred eEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEec-c-cccCCHHHHHHHHHHHHHhCcCccCcEEEEE
Q 002468 307 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 384 (918)
Q Consensus 307 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdR-L-d~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq 384 (918)
.++.++|+|||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4688999999975433211100 001 1246788999999 4 4789999999999875 22 356887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCC-CHHHHHHHHHHccEEEECCCCccCChhHHHHHHh
Q 002468 385 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 463 (918)
Q Consensus 385 ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v-~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~ 463 (918)
+|... ... . ..|.+ .|.. +.+++..+|+.||+||+||.+|||++|++|||||
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 77421 100 0 12443 3443 6789999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 002468 464 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 541 (918)
Q Consensus 464 ~~~~~g~lIlSe~aG~~~~l-g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 541 (918)
+ .|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... +........++.+ ..+++..-++.+++-..
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4 899999999998888 45899999999999998653322110 0000123345554 56888888887776443
No 72
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.83 E-value=2e-18 Score=190.36 Aligned_cols=282 Identities=23% Similarity=0.213 Sum_probs=195.0
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
...|+|++|......+...+.....+.++.+..|.+++....... .........+..+|.+.+.+......|.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 357999999655444333333334457888888877653321111 1122233345578999998877666654311
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll 370 (918)
....++.++|+|+|...|.+.... ....+ ....++..|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADRA-----EARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcchH-----HHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 123568899999999887653210 00111 11246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002468 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 450 (918)
Q Consensus 371 ~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~ 450 (918)
+++|+ +.|+++|. ++....++ +++...+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~-----~~~~~~~~----~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGD-----GPLREALE----ALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcC-----CcchHHHH----HHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 87665 45776653 22222233 33333221 1233467999999999999999999999999
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHhc
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 527 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~-~~v~~~ 527 (918)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++.. ++..+.+ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999995 899999999988887 4457999999999999999999998753 3344444 445677
Q ss_pred CHHHHHHHHHHHHHH
Q 002468 528 TAQEWAETFVSELND 542 (918)
Q Consensus 528 ~~~~W~~~fl~~l~~ 542 (918)
++..+++.+.+.+.+
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 888888887766543
No 73
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.83 E-value=2.6e-18 Score=191.03 Aligned_cols=279 Identities=19% Similarity=0.178 Sum_probs=196.7
Q ss_pred cCCCCEEEEeC-CccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcC-CC-------hHHHH-HHHHhCCEEeEeCHHH
Q 002468 210 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-PS-------RSDLL-RAVLAADLVGFHTYDY 279 (918)
Q Consensus 210 ~~~~DiIwvHD-yhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~l-P~-------~~~ll-~~ll~aDlIgf~t~~~ 279 (918)
....|+|++|. ..+..++........+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 44679999998 344445544444455789999999887754321111 11 11111 2245689999999877
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCH
Q 002468 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 280 ~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi 359 (918)
.+.|.. .+ ....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----RG-----------VPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----cC-----------CCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 766541 11 1235788999999998776542211 01111 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 439 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 439 (918)
..+++|+..+.+. |+ +.|+++|. ++....++ +++... + ...|.+ .|.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~----~~~~~~----~---~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELK----ELAKAL----G---LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHH----HHHHHc----C---CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998766 54 45776653 33333333 222111 1 124664 57999999999999
Q ss_pred HccEEEECCCCccC-----ChhHHHHHHhcCCCCceEEEeCCCCchhhcc--CCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 002468 440 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSLG--AGAILVNPWNITEVANAIARALNMSPEE 512 (918)
Q Consensus 440 ~ADv~vv~Sl~EG~-----nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg--~~allVnP~D~~~lA~ai~~aL~m~~~e 512 (918)
.||++++||..|++ +++++|||+|+ .|+|+|..+|..+.+. .+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 66789999994 8999999999999883 4799999999999999999999654 57
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHH
Q 002468 513 REKRHWHNFTHVT-THTAQEWAETF 536 (918)
Q Consensus 513 r~~r~~~~~~~v~-~~~~~~W~~~f 536 (918)
+..+.++.++++. .+++..+++.|
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 7777888888886 78888888765
No 74
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.83 E-value=1.3e-18 Score=193.23 Aligned_cols=272 Identities=24% Similarity=0.199 Sum_probs=192.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCCh----HHHHHH-HHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~----~~ll~~-ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
..|+|++|+............+..++++.+++|..||..-........ ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 468999997544322222222345688888899877632211111111 122222 34678888887765542211
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCeEEEEEecccccCCHHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 364 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl~VdRLd~~KGi~~~L~ 364 (918)
....++.++|+|+|.+.|.+..... ..++.+ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0123577899999998886542211 112222 45778999999999999999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|+..+.++ |+ +.|+++|. ++....++ .. ...|. +.|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~--------~~--------~~~v~-~~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PP----VRLVIVGD-----GPARARLE--------AR--------YPNVH-FLGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CC----ceEEEEeC-----CchHHHHh--------cc--------CCcEE-EEeccCHHHHHHHHHhCCEE
Confidence 99998776 65 45776763 22221121 11 12355 46789999999999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
++||..||||++++|||||+ .|+|+|+.+|..+.+ +..|++++|.|.++++++|.++++.+ +++.++....++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999988888 35799999999999999999999865 567777788888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 002468 523 HVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 523 ~v~~~~~~~W~~~fl~~l 540 (918)
.+..+++..+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888899999888887643
No 75
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.83 E-value=1.2e-18 Score=197.36 Aligned_cols=235 Identities=14% Similarity=0.142 Sum_probs=165.4
Q ss_pred CCCEEEEeCCccchHHHHHHhh-CCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~-~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
..|+||+|+.....+..++++. ....++..+.|..++....+. ...+..+|.+...+..-.+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 4699999998777666666654 333455666776554321111 12235688888877655444432
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEeccc--ccCCHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKLLAFEK 368 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd--~~KGi~~~L~Af~~ 368 (918)
.++ ...++.++|+|||.+.|.... + ...++++|+++||+. +.||+..+++|+..
T Consensus 151 ~~~-----------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RGI-----------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cCC-----------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 121 124678899999976654211 1 013467899999996 46999999999987
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCC--HHHHHHHHHHccEEEE
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD--FPALCALYAVTDVALV 446 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~--~~el~aly~~ADv~vv 446 (918)
+. + ++.|+++|. +++.+ ++++++.+.|.. ..|+ |.|.++ .+++..+|+.||++|+
T Consensus 207 ~~---~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---G----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---C----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhcCcEEEE
Confidence 52 2 366887764 34333 344555544321 1254 567664 5899999999999999
Q ss_pred CCCCccCChhHHHHHHhcCCCCceEEEeC-CCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 002468 447 TSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 510 (918)
Q Consensus 447 ~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~ 510 (918)
||..||||++++|||||+ .|+|+|+ .+|+.+.+ |.+|++|+|.|++++|++|.++++.+.
T Consensus 264 ~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred CCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 999999999999999995 8999999 88888877 568999999999999999999998774
No 76
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.83 E-value=3e-18 Score=196.73 Aligned_cols=279 Identities=16% Similarity=0.111 Sum_probs=179.0
Q ss_pred HHHHHHHHhhcC--CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhc------CCChH------H----
Q 002468 200 QMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS------D---- 261 (918)
Q Consensus 200 ~~fa~~i~~~~~--~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~------lP~~~------~---- 261 (918)
..+.+.+.+..+ +.|+|++|...+. .++.....+.|..+-+|--. ++.+.. .|.+. .
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 344455555553 5699999864433 33332233566666666321 111111 11110 0
Q ss_pred HHH-HHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHH
Q 002468 262 LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 340 (918)
Q Consensus 262 ll~-~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~ 340 (918)
+-+ .+..+|.|.+.+....+.+.+ ..+ ....++.++|+|||.+.|.+....+. . .
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~----~~~-----------~~~~~v~vipngvd~~~f~~~~~~~~------~---~ 220 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR----LAP-----------EAAGRITAFPNGVDADFFSPDRDYPN------P---Y 220 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH----hCC-----------CCCCCeEEeecccchhhcCCCccccC------C---C
Confidence 001 133678888877766555432 111 12346788999999998865421100 0 0
Q ss_pred hcCCeEEEEEecccccCCHHHHH----HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCC
Q 002468 341 FAGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 416 (918)
Q Consensus 341 ~~~~~vIl~VdRLd~~KGi~~~L----~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~ 416 (918)
..++++|+++||+++.||+..++ .++..+.+++|++ .|+++|. ++. .+++++.. .
T Consensus 221 ~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~----~l~ivG~-----g~~-----~~~~~l~~----~--- 279 (397)
T TIGR03087 221 PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAA----EFYIVGA-----KPS-----PAVRALAA----L--- 279 (397)
T ss_pred CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCc----EEEEECC-----CCh-----HHHHHhcc----C---
Confidence 13567899999999999999888 5566667778875 4777763 222 12333311 1
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-cCCeEEECCCC
Q 002468 417 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWN 494 (918)
Q Consensus 417 ~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-g~~allVnP~D 494 (918)
..|+ |.|.++ ++..+|+.||++|+||. .||++++++|||||+ .|+|+|..++..... +..|++|. .|
T Consensus 280 ---~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~ 348 (397)
T TIGR03087 280 ---PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-AD 348 (397)
T ss_pred ---CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CC
Confidence 1254 578886 68899999999999997 599999999999994 788888864322111 34678885 89
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 002468 495 ITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 540 (918)
Q Consensus 495 ~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 540 (918)
++++|++|.++++++ +.++.+.++.++++ +.|++...++.+.+-+
T Consensus 349 ~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 349 PADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999864 56777788888887 5788888888776554
No 77
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.82 E-value=1.7e-18 Score=189.51 Aligned_cols=262 Identities=17% Similarity=0.105 Sum_probs=181.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.+.+.+......+ .
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------~ 151 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------Y 151 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh-------h
Confidence 5799999998722222222221 1477788887654322111 011112233557888888877554111 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
.....++.++|+|+|...+... ...+++.++++||+.+.||+..+++|++.+.+
T Consensus 152 -----------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 152 -----------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred -----------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 1123468899999998765432 12457789999999999999999999999988
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 451 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~E 451 (918)
.+|++ .|+++|.. +.... +.+++.+++. .+.+.+.|. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 47766632 22222 3334444332 123335665 689999999999999999999
Q ss_pred cCChhHHHHHHhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 002468 452 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 528 (918)
Q Consensus 452 G~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l---g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 528 (918)
|||++++|||+|+ .|+|+|+..|..+.+ +.+|+++++.|++++|++|.++++++ +.+..+.++.++.++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 799999876655544 34899999999999999999999865 466666677788888888
Q ss_pred HHHHHHHHH
Q 002468 529 AQEWAETFV 537 (918)
Q Consensus 529 ~~~W~~~fl 537 (918)
+..+++.|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 888887764
No 78
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.82 E-value=7.8e-19 Score=202.77 Aligned_cols=264 Identities=11% Similarity=0.071 Sum_probs=164.6
Q ss_pred CCCEEEEeCCccchH---HHHHHhhCCCCeEEEEEcCCCCChhhhhcCC--ChHHHHHHHHhCCEEeEeCHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFL---PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSA 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~ll---p~~lr~~~~~~~I~~flH~PfPs~e~fr~lP--~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~ 286 (918)
..|+|++|+.-.+.. +..++++. .. ++.++|+.|+. +++... .....+...+ ..|++.|.
T Consensus 116 ~pDVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~---------~~~~~r~~-- 180 (462)
T PLN02846 116 EADIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYI---------NSWVVDIY-- 180 (462)
T ss_pred CCCEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHH---------HHHHHHHh--
Confidence 369999999655554 33444433 34 77789998853 332211 1111111111 12222221
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cC---CeEEEEEecccccCCHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQK 362 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~vIl~VdRLd~~KGi~~~ 362 (918)
|+.++.++... .++. ..+...+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+
T Consensus 181 ~d~vi~pS~~~--~~l~---~~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~L 246 (462)
T PLN02846 181 CHKVIRLSAAT--QDYP---RSIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKEL 246 (462)
T ss_pred cCEEEccCHHH--HHHh---hCEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHH
Confidence 33333222100 0000 012234589999988754321 11112 22 3468999999999999999
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
|+||..+.+..|++ .|+++| +||+..+|+ +++.+++. .+++|.|..+.+ .+|+.+|
T Consensus 247 i~a~~~l~~~~~~~----~l~ivG-----dGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~~---~~~~~~D 302 (462)
T PLN02846 247 LKLLHKHQKELSGL----EVDLYG-----SGEDSDEVK----AAAEKLEL--------DVRVYPGRDHAD---PLFHDYK 302 (462)
T ss_pred HHHHHHHHhhCCCe----EEEEEC-----CCccHHHHH----HHHHhcCC--------cEEEECCCCCHH---HHHHhCC
Confidence 99999988888874 466664 566655555 44444321 133467765554 6899999
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 520 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~ 520 (918)
|||+||.+||||+|++|||||+ .|+|+++..| .+.+ |.+|+++ .|.++++++|.++|..++++... +.
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~G----~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a 372 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAMG----KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ 372 (462)
T ss_pred EEEECCCcccchHHHHHHHHcC----CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH
Confidence 9999999999999999999994 7888888776 5767 6788887 48999999999999865432211 11
Q ss_pred HHHHHhcCHHHHHHHHHHHHH
Q 002468 521 FTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 521 ~~~v~~~~~~~W~~~fl~~l~ 541 (918)
...++|..-.++|+..+.
T Consensus 373 ---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 373 ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred ---HHhCCHHHHHHHHHHHhc
Confidence 236777777777766553
No 79
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.82 E-value=6.2e-19 Score=187.52 Aligned_cols=184 Identities=17% Similarity=0.287 Sum_probs=125.2
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 652 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa~ 652 (918)
||+|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.++++.++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 799999999986 34599999999999997 699999999999999999999884 5999999999
Q ss_pred EEecCCeeeeeccccCChHHHHHHHHHHHHHHhcC--------CCceeeec-----------c-----------------
Q 002468 653 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQR-----------E----------------- 696 (918)
Q Consensus 653 i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K-----------~----------------- 696 (918)
+....++.. .....+ .+.+..+++...... .+.++... .
T Consensus 66 i~~~~~~~l--~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKIL--YEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEEE--EEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeecccccc--hhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 943333321 111223 344445554443321 11111111 0
Q ss_pred -ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEE
Q 002468 697 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 775 (918)
Q Consensus 697 -~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vl 775 (918)
..+.++. ++ .....+.+++ ...+...-..+..+..++||.|+++|||.|++.|+++++ ++.+.++
T Consensus 141 i~ki~~~~---~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFFP---DP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEES---CH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeeccc---cc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 0001000 11 1223333333 222222113345679999999999999999999999998 6789999
Q ss_pred EEecCCCCcHHHHHHcCc
Q 002468 776 CIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 776 aiGD~d~nDedMf~~~~~ 793 (918)
+||| +.||++||+.+..
T Consensus 207 ~~GD-~~ND~~Ml~~~~~ 223 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGY 223 (254)
T ss_dssp EEES-SGGGHHHHHHSSE
T ss_pred Eeec-ccccHhHHhhcCe
Confidence 9999 9999999999843
No 80
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.81 E-value=8.4e-18 Score=186.07 Aligned_cols=257 Identities=19% Similarity=0.193 Sum_probs=176.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|.+..+.++.+...+...+++.+++|-.++.... ...+. ...|.+...+....+.|.. .
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~------~~~~~---~~~d~ii~~s~~~~~~~~~----~- 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPR------QGLFK---KGGDAVIAPSRFLLDRYVA----N- 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecch------hhhhc---cCCCEEEEeCHHHHHHHHH----c-
Confidence 46999999875554433322223458899999865432111 11111 1128888877655554432 1
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
+ ....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 162 G-----------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred C-----------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1 11347889999999987754311 012456789999999999999999999998866
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 450 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl-~ 450 (918)
++ +.|+++|... ......... .. ...|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~--------~~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EG--------DPRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cC--------CCeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 43 5677776432 111111111 11 01344 5789999999999999999999998 7
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 528 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 528 (918)
|||+++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++.+ +.++.+.++.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999994 899999999998888 34799999999999999999999854 4566666666666543
Q ss_pred HHHHHHHHHH
Q 002468 529 AQEWAETFVS 538 (918)
Q Consensus 529 ~~~W~~~fl~ 538 (918)
..+++.+++
T Consensus 347 -~~~~~~~~~ 355 (359)
T cd03823 347 -EDQAEEYLK 355 (359)
T ss_pred -HHHHHHHHH
Confidence 455554443
No 81
>PLN02887 hydrolase family protein
Probab=99.81 E-value=1.1e-18 Score=206.54 Aligned_cols=198 Identities=13% Similarity=0.186 Sum_probs=126.5
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 564 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
++.| +.+.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+...+..+++
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 3444 446899999999999986 45799999999999997 6999999999999999988887642
Q ss_pred -----------eEEeeCceEEEecCCe--eeeeccccCChHHHHHHHHHHHHHHhcC--------CCceeeeccceE-EE
Q 002468 644 -----------WLAAENGMFLRCTTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETSL-VW 701 (918)
Q Consensus 644 -----------~liaenGa~i~~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~~sl-~~ 701 (918)
++|+.||+.|...++. +... ++ .+.+.++++...+.. .+.|........ .+
T Consensus 365 ~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~ 437 (580)
T PLN02887 365 AGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSL 437 (580)
T ss_pred ccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHH
Confidence 3567799999853222 2222 23 244455554332211 111110000000 00
Q ss_pred Ee--e--c---c-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHH
Q 002468 702 NY--K--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRI 757 (918)
Q Consensus 702 hy--r--~---a-d~-e~------------~--~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~L 757 (918)
++ . . . +. ++ . ......+.+.+ ...+. ..+.++ .+..++||.|+|+|||.||+.|
T Consensus 438 ~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~L 515 (580)
T PLN02887 438 HTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKML 515 (580)
T ss_pred HHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 00 0 0 0 00 00 0 00011222222 22121 235544 4678999999999999999999
Q ss_pred HHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 758 LAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 758 l~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++++| ++.++++|||| +.||.+||+.++.
T Consensus 516 ~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 516 LNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 99999 68899999999 9999999999853
No 82
>PHA01630 putative group 1 glycosyl transferase
Probab=99.81 E-value=2.9e-18 Score=192.15 Aligned_cols=212 Identities=13% Similarity=0.104 Sum_probs=151.1
Q ss_pred hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEE
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 347 (918)
Q Consensus 268 ~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vI 347 (918)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...+..++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 377777777654444432 1110 1236889999999998864311 01244566
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCC
Q 002468 348 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 427 (918)
Q Consensus 348 l~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 427 (918)
++++|+.+.||++.+|+|++.+.+++|+ +.|+++|. ++. ++ + +. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~-----~~~--~~--~---l~-~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSS-----NML--DP--R---LF-GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeC-----ccc--ch--h---hc-ccc------c------eec
Confidence 6778999999999999999999887775 45776762 111 11 1 10 010 1 235
Q ss_pred CCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEE---------------
Q 002468 428 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV--------------- 490 (918)
Q Consensus 428 ~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allV--------------- 490 (918)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999994 899999999888877 4566665
Q ss_pred -----CCCCHHHHHHHHHHHhcCC-HHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHH
Q 002468 491 -----NPWNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELN 541 (918)
Q Consensus 491 -----nP~D~~~lA~ai~~aL~m~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~ 541 (918)
+| |.++++++|.++|..+ ++++++++ ...+...+++++...++.+++-++
T Consensus 273 ~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 273 VGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred cccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44 7788999999999874 23444444 444556789999999998887764
No 83
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.81 E-value=1.3e-17 Score=186.01 Aligned_cols=262 Identities=21% Similarity=0.203 Sum_probs=180.0
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH-HHHHHhCCEEeEeCHHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
...|+|++|+...+.....+.. ..+.+..+++|........+. .....+ -..+..||.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLL-PRKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHh-ccCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 4679999998655433222222 246677888886432211111 111122 22456789988888766554321
Q ss_pred HhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 369 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~l 369 (918)
. . ....++.++|+|||...|.+.... . ........++.+|+++||+.+.||+..+++|++++
T Consensus 155 ~-~-----------~~~~~~~~i~~gi~~~~~~~~~~~---~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L-R-----------RFRDKVRVIPLGLDPARYPRPDAL---E---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h-c-----------CCccceEEecCCCChhhcCCcchh---h---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 1 112467899999999877643210 0 01111124678999999999999999999999886
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 449 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl 449 (918)
. ++.|+++|. ++.. .++.+++.+.+.. ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 366777764 2322 2334444333211 2355 5799999999999999999999997
Q ss_pred --CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 002468 450 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 524 (918)
Q Consensus 450 --~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l---g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v 524 (918)
.||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++++ ++++++.++.++++
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999994 899999999888876 56899999999999999999999865 56777777888877
Q ss_pred Hh
Q 002468 525 TT 526 (918)
Q Consensus 525 ~~ 526 (918)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 54
No 84
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.80 E-value=1.1e-17 Score=184.05 Aligned_cols=273 Identities=20% Similarity=0.128 Sum_probs=190.3
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCC--ChHHHH-HHHHhCCEEeEeCHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLL-RAVLAADLVGFHTYDYARHFVSACT 288 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP--~~~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~ 288 (918)
..|+|++|..+..++..++++.....++.+.+|...+.... .... ....+- ..+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTS-GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhcc-chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 46899999887777777776655566777777764321110 0000 001111 12345789998888777665431
Q ss_pred HHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHH
Q 002468 289 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 368 (918)
Q Consensus 289 r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ 368 (918)
... ....++.+.|+|+|.+.+.+.... ...++..|+++||+.+.||+..+++|++.
T Consensus 157 --~~~----------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 --GII----------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred --cCC----------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 110 013457788999999877643210 12467899999999999999999999999
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 448 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~S 448 (918)
+.+.+|+ +.|+++|..... . ..... ++...+.. ..|. +.|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~----~~l~i~G~~~~~---~--~~~~~---~~~~~~~~------~~v~-~~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPN----VRLLLVGDGDEE---N--PAAIL---EIEKLGLE------GRVE-FLGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCC----eEEEEEcCCCcc---h--hhHHH---HHHhcCCc------ceEE-Eeec--cccHHHHHHhccEEEecC
Confidence 8877776 457777653311 1 11111 12222111 2355 4555 678999999999999999
Q ss_pred CCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HH
Q 002468 449 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 525 (918)
Q Consensus 449 l~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~-v~ 525 (918)
..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++.++.+++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999994 899999999999888 56799999999999999999988765 4566667777777 57
Q ss_pred hcCHHHHHHHHH
Q 002468 526 THTAQEWAETFV 537 (918)
Q Consensus 526 ~~~~~~W~~~fl 537 (918)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 888888887764
No 85
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.80 E-value=1.2e-18 Score=184.29 Aligned_cols=181 Identities=17% Similarity=0.214 Sum_probs=119.4
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 652 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa~ 652 (918)
|++|+||||++. ...++++++++|++|.+ .|+.|+++|||+...+..++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 689999999986 34689999999999997 799999999999999988887774 5799999999
Q ss_pred EEecCC---eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC
Q 002468 653 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 729 (918)
Q Consensus 653 i~~~~~---~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~ 729 (918)
+...++ .|...+ ...|................-.+.. ...+.......+++ .+.++.+++ .
T Consensus 66 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~-~----- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAYL----EEEWFLDIVIAKTFPFSRLKVQYPR--RASLVKMRYGIDVD----TVREIIKEL-G----- 129 (225)
T ss_pred EEeCCCCceEEeccc----CHHHHHHHHHhcccchhhhcccccc--ccceEEEeecCCHH----HHHHHHHhc-C-----
Confidence 986432 233222 3334322111110000000000000 01111111111222 223333333 1
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 730 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 730 ~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..+.+..+...+||.|++++||.|+++++++++ ++.+++++||| +.||++||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123334556799999999999999999999998 67899999999 9999999999854
No 86
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.80 E-value=2.8e-18 Score=186.59 Aligned_cols=191 Identities=16% Similarity=0.212 Sum_probs=122.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|+||+|+||||++. +..++++++++|++|.+ +|+.|+|+|||++..+...+..++ .++|+.|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 589999999999976 34689999999999997 699999999999999999988884 4699999
Q ss_pred ceEEEec-CCeeeeeccccCChHHHHHHHHHHHHHHhcCCCc--------eeeecc--c--------eEEE----Eeecc
Q 002468 650 GMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--------HFEQRE--T--------SLVW----NYKYA 706 (918)
Q Consensus 650 Ga~i~~~-~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--------~iE~K~--~--------sl~~----hyr~a 706 (918)
|+.+... +++. +.....+ .+.+.++++......-.. +..... . .+.. .+...
T Consensus 68 Ga~i~d~~~~~~--l~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (272)
T PRK10530 68 GTYLYDYQAKKV--LEADPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQV 142 (272)
T ss_pred CcEEEecCCCEE--EEecCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEc
Confidence 9999852 3321 1111223 244444554432211011 111000 0 0000 00000
Q ss_pred Ch--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCC
Q 002468 707 DV--EF----G-----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 768 (918)
Q Consensus 707 d~--e~----~-----------~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~ 768 (918)
+. +. . .....++.+.+ . ...++.+. .+..++||.+++++||.|+++++++++
T Consensus 143 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g------ 212 (272)
T PRK10530 143 DSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV-E---HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG------ 212 (272)
T ss_pred ccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH-h---hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 00 00 0 00011222222 1 11233332 345689999999999999999999998
Q ss_pred CCCceEEEEecCCCCcHHHHHHcCc
Q 002468 769 TAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 769 ~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++.+++++||| +.||.+||+.++.
T Consensus 213 i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 67899999999 9999999999853
No 87
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.80 E-value=6.3e-18 Score=195.51 Aligned_cols=278 Identities=10% Similarity=0.011 Sum_probs=179.8
Q ss_pred CCCCEEEEeCCccc--h-HHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCCh------HHHHHH-H-HhCCEEeEeCHHH
Q 002468 211 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR------SDLLRA-V-LAADLVGFHTYDY 279 (918)
Q Consensus 211 ~~~DiIwvHDyhL~--l-lp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~------~~ll~~-l-l~aDlIgf~t~~~ 279 (918)
+..|+|++|..... . ++.++++ ..+.|+.+.+|--+++..-. ..+.. ...++. + -.||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985543 2 2333333 34688888888654321100 01100 011111 2 2478887777654
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHH---------------H--hc
Q 002468 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 342 (918)
Q Consensus 280 ~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 342 (918)
.+.+.+ .+ ....+|.++|+| +.+.|.+.... .....+.. . -+
T Consensus 172 ~~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 433321 11 124578899999 55677654211 11111110 0 12
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCc--cCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~--~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
+..+++++||+.+.||+..+|+|++.+.+..++. ..++.|+++|. ++.. +++++++.+.+. .
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~----~~l~~~~~~~~l-------~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLK----EKYLERIKELKL-------K 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccH----HHHHHHHHHcCC-------C
Confidence 3467889999999999999999999987632110 01356887764 3333 344455544321 2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEEC---CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVT---SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 495 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv~---Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~ 495 (918)
.++++.|.++.+++..+|+.||++|++ +..+||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 477778889999999999999999974 33588999999999994 799999999998888 56899994 99
Q ss_pred HHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 002468 496 TEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFV 537 (918)
Q Consensus 496 ~~lA~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl 537 (918)
+++|++|..+++++ +++++++.++.++..+ ..|.+.+.
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 99999999999982 5677777777777664 35555544
No 88
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.80 E-value=2.7e-18 Score=200.90 Aligned_cols=262 Identities=11% Similarity=0.080 Sum_probs=161.4
Q ss_pred CCCEEEEeCCccchHH---HHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHH--
Q 002468 212 DGDVVWCHDYHLMFLP---KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 286 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp---~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~-- 286 (918)
+.||||++..-.+... ..+.+++ + +++..+||.|+.+--...+..-+.++. .++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 5699999985544333 2233333 2 688889999985322222222122111 122233332
Q ss_pred HHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc---CCeEEEEEecccccCCHHHHH
Q 002468 287 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 363 (918)
Q Consensus 287 ~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vIl~VdRLd~~KGi~~~L 363 (918)
|+.++.++.... ++. ...|. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 455554431100 111 11111 1259999999865321 111 1221 234589999999999999999
Q ss_pred HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002468 364 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443 (918)
Q Consensus 364 ~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 443 (918)
+|+..+.++.|++ .|+++| +||...+++ +++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pnv----rLvIVG-----DGP~reeLe----~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGF----NLDVFG-----NGEDAHEVQ----RAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCe----EEEEEc-----CCccHHHHH----HHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 9999988877764 577665 455544444 44444321 2544 45543 33479999999
Q ss_pred EEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 444 ~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
||+||.+||||+|++|||||+ .|||+++..|.. .+ |.++++ +.|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~e-~V~~g~nGll--~~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSNE-FFRSFPNCLT--YKTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCCc-eEeecCCeEe--cCCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999994 899999988753 34 456665 3799999999999999775 33221 1
Q ss_pred HHHHhcCHHHHHHHHHH
Q 002468 522 THVTTHTAQEWAETFVS 538 (918)
Q Consensus 522 ~~v~~~~~~~W~~~fl~ 538 (918)
....++|..-++.|++
T Consensus 690 -a~~~~SWeAaadrLle 705 (794)
T PLN02501 690 -QRYNLSWEAATQRFME 705 (794)
T ss_pred -HHhhCCHHHHHHHHHH
Confidence 1235666666666554
No 89
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.80 E-value=1.5e-17 Score=184.31 Aligned_cols=242 Identities=19% Similarity=0.148 Sum_probs=164.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|+....++ . .+..+.++.+.+|..+..... .........+.+.+-+......+.
T Consensus 87 ~~Divh~~~~~~~~~--~--~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~------- 147 (335)
T cd03802 87 DFDIVHNHSLHLPLP--F--ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP------- 147 (335)
T ss_pred CCCEEEecCcccchh--h--hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc-------
Confidence 469999999887766 2 234567888999987643211 123344445555544443222111
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 371 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~ 371 (918)
.. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 148 ------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 148 ------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred ------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 01 467789999999988642 1245789999999999999999999754
Q ss_pred hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002468 372 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 450 (918)
Q Consensus 372 ~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl-~ 450 (918)
++ +.|+++|... ..+ .+...+.+... ++ ..|. +.|.++.+++..+|+.||++|+||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4577777432 111 12222222210 11 1355 5799999999999999999999998 5
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhc
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 527 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 527 (918)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+ ..++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999995 899999999999888 347999987 99999999999875421 11222 2556
Q ss_pred CHHHHHHHHHH
Q 002468 528 TAQEWAETFVS 538 (918)
Q Consensus 528 ~~~~W~~~fl~ 538 (918)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 66655555543
No 90
>PTZ00174 phosphomannomutase; Provisional
Probab=99.79 E-value=6.1e-18 Score=182.12 Aligned_cols=198 Identities=18% Similarity=0.219 Sum_probs=123.9
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc---C-ceE
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 645 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l---~-l~l 645 (918)
.+.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 45799999999999986 45789999999999987 69999999999999998888743 2 367
Q ss_pred EeeCceEEEecCCee-eeeccccCChHHHHHHHHHHHHHH-----hcCCCceeeeccceEEEEee-ccC-h----hhh--
Q 002468 646 AAENGMFLRCTTGKW-MTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK-YAD-V----EFG-- 711 (918)
Q Consensus 646 iaenGa~i~~~~~~w-~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~~sl~~hyr-~ad-~----e~~-- 711 (918)
|++||+.+...++.+ ...++..++.++...+.++++.+. ....+.+++.......+.+. ... . ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 999999998644332 222111123344444444433221 11123333322111111110 000 0 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecC---CCCc
Q 002468 712 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKD 784 (918)
Q Consensus 712 ---~~~a~el~~~L~~~~~~~~~l~v~~-G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~---d~nD 784 (918)
.....++.+.+ ...+....+.... +..++||.|+|+|||.||+.|+++ .++|+||||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 01112344444 3323332334444 357999999999999999999987 3689999992 3799
Q ss_pred HHHHHHcCc
Q 002468 785 EDVYAFFEP 793 (918)
Q Consensus 785 edMf~~~~~ 793 (918)
++||++++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997643
No 91
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.78 E-value=2.1e-17 Score=185.72 Aligned_cols=248 Identities=20% Similarity=0.193 Sum_probs=167.9
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCC----Ch-hhhhcCCChH--------HH-----HHHHHhCCEE
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSRS--------DL-----LRAVLAADLV 272 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfP----s~-e~fr~lP~~~--------~l-----l~~ll~aDlI 272 (918)
.+.|+|+++...... ..+ ..+..+..+++|.|.+ .. .+....+... .. .+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 367999776532221 112 3456777888898621 11 1111111100 01 1224567888
Q ss_pred eEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEec
Q 002468 273 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 352 (918)
Q Consensus 273 gf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdR 352 (918)
...+....+.+.+ ..+ . +..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~~~------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YYG------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----HhC------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8877765555532 111 1 235789999998876421 23567999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHH
Q 002468 353 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 432 (918)
Q Consensus 353 Ld~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~ 432 (918)
+.+.||++.+++|++++ | +.|+++|. +++...++ + ... ..|. |.|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~----~---~~~--------~~V~-~~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLR----A---KAG--------PNVT-FLGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHH----h---hcC--------CCEE-EecCCCHH
Confidence 99999999999999865 3 23666663 33333333 2 110 2365 57999999
Q ss_pred HHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 002468 433 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 510 (918)
Q Consensus 433 el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~ 510 (918)
++..+|+.||++|+||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|..+++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999995 899999999988887 468999999999999999999998774
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHH
Q 002468 511 EEREKRHWHNFTHVTTHTAQEWAET 535 (918)
Q Consensus 511 ~er~~r~~~~~~~v~~~~~~~W~~~ 535 (918)
...+.+++.+..+++.+..++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREK 349 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHH
Confidence 123344555566666655443
No 92
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.78 E-value=5e-17 Score=181.95 Aligned_cols=268 Identities=16% Similarity=0.050 Sum_probs=177.8
Q ss_pred CCCEEEEeCCccc--hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHH-----HHHHhCCEEeEeCHHHHHHHH
Q 002468 212 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 284 (918)
Q Consensus 212 ~~DiIwvHDyhL~--llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll-----~~ll~aDlIgf~t~~~~~~Fl 284 (918)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|.+.+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3466666665443 33333333 367888888853111111110 1 11111 124568888887765444432
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHH--hcCCeEEEEEecccccCCHHHH
Q 002468 285 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET--FAGRKVMLGVDRLDMIKGIPQK 362 (918)
Q Consensus 285 ~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~--~~~~~vIl~VdRLd~~KGi~~~ 362 (918)
...+ ... .++|+|+|...+.+. ...++. +.+++.|+++||+.+.||+..+
T Consensus 160 ----~~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 ----EKYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred ----HhcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1112 111 689999998876531 011112 2355678999999999999999
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
++|+.++.. ++.|+++|.... ...+.+++.+. . +.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~-----~~~~~~~~~~~---~----~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADH-----NTPYGKLLKEK---A----AAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCC-----cchHHHHHHHH---h----CCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 356887775321 11233333321 1 111 1355 579999999999999999
Q ss_pred EEEECCCC-ccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 002468 443 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 521 (918)
Q Consensus 443 v~vv~Sl~-EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~ 521 (918)
++++||.. ||||++++|||||+ .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+....++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999994 899999999988888778999998876 999999999976 45666667777
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 002468 522 THVT-THTAQEWAETFVSEL 540 (918)
Q Consensus 522 ~~v~-~~~~~~W~~~fl~~l 540 (918)
+.+. .+++..-+++|++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 478777777776543
No 93
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.77 E-value=3.8e-18 Score=183.87 Aligned_cols=191 Identities=16% Similarity=0.249 Sum_probs=129.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC----ceEEe
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 647 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~----l~lia 647 (918)
+.+|++|+||||++..+ .+..++|++.++|+++.+ .|+.++++|||+...+.++...++ ..+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 35899999999998421 134578999999999986 688999999999999998866552 35899
Q ss_pred eCceEEEecCC-----eeeeeccccCChHHH-HHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHH
Q 002468 648 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 721 (918)
Q Consensus 648 enGa~i~~~~~-----~w~~~~~~~~~~~w~-~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~ 721 (918)
+||+.|..++. .|.... ...|. +.+..+...+...++....+.+...+.+.+.... ......++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999986431 121111 12233 3344444444333444444455566666543211 11112233333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 722 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 722 L~~~~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
+ ... ...+.+ ..+..++||.|++++||.|++++++.++ ++.+.+++||| +.||++||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123443 5678899999999999999999999998 67899999999 99999999984
No 94
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.77 E-value=1.3e-17 Score=178.30 Aligned_cols=183 Identities=15% Similarity=0.172 Sum_probs=123.4
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc----eEEeeC
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 649 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l----~liaen 649 (918)
||++|+||||++. +..+++.+ ++|+ +. ++|+.++|+|||++..+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999985 23456655 7776 44 46999999999999999999988743 499999
Q ss_pred ceEEEecCCeeeeeccccCChHHHHHH-----HHHHHHHHhcCCCceeeeccc--eEEEEeeccChhhhHHHHHHHHHHH
Q 002468 650 GMFLRCTTGKWMTTMPEHLNMEWVDSL-----KHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 722 (918)
Q Consensus 650 Ga~i~~~~~~w~~~~~~~~~~~w~~~v-----~~il~~~~~~~~Gs~iE~K~~--sl~~hyr~ad~e~~~~~a~el~~~L 722 (918)
|+.+..... +. .+..|...+ ...+..+....+|..++.+.. ...++|+..+.... ...++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEP--ILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccch--HHHHHHHHH
Confidence 999864221 11 011121111 111233444567776666552 35677764322111 122333444
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 723 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 723 ~~~~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
... ...+.+ ..+..++||.|+++|||.|++.|+++++ ++++.+++||| +.||++||+.+.
T Consensus 135 -~~~--~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~ 195 (236)
T TIGR02471 135 -RQQ--SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLT 195 (236)
T ss_pred -Hhc--cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCC
Confidence 222 123443 4566789999999999999999999998 56889999999 999999999763
No 95
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.76 E-value=1.5e-17 Score=179.76 Aligned_cols=191 Identities=16% Similarity=0.285 Sum_probs=124.6
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 651 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa 651 (918)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+...+..++ .++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 34689999999999997 599999999999999999998874 479999999
Q ss_pred EEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcC--------CCceeeeccce-EEEE----eec----cChhh----
Q 002468 652 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-LVWN----YKY----ADVEF---- 710 (918)
Q Consensus 652 ~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~~s-l~~h----yr~----ad~e~---- 710 (918)
.+...+++ .+.....+ .+.+.++++.+.... .+.++...... +..+ +.. .+.+.
T Consensus 66 ~i~~~~~~--~i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGE--ILYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCC--EEeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 99864322 11111223 234444444433221 11121110000 0000 000 00000
Q ss_pred ---------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 711 ---------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 711 ---------~~~~a~el~~~L~~~-~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
......++.+.+ .. .+ ...+.+ ..+..++||.|+|+|||.|++.+++.++ ++++.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 001122333333 21 11 123554 4567899999999999999999999998 67899999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||.+||+.++.
T Consensus 213 -~~nD~~m~~~~~~ 225 (256)
T TIGR00099 213 -GMNDIEMLEAAGY 225 (256)
T ss_pred -cHHhHHHHHhCCc
Confidence 9999999999965
No 96
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.76 E-value=9e-17 Score=175.90 Aligned_cols=246 Identities=19% Similarity=0.153 Sum_probs=167.0
Q ss_pred CCCEEEEeCC-ccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDy-hL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
..|+|++|++ ...++..+.+. . +.++.+.+|..++..... ..+........+..+|.+.+.+....+.+.+ .
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~ 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLK----L 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHH----h
Confidence 4699999998 44444444433 3 788999999877532211 1111112233455788888887765555443 1
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll 370 (918)
.+. ...++.++|+|+|...+.+....+ . .+ ....++.+|+++||+.+.||+..+++|++.+.
T Consensus 154 ~~~-----------~~~~~~vi~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LGI-----------PPDKIEVIYNPIDIEEIRALAEEP-----L-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hcC-----------CccccEEecCCcChhhcCcccchh-----h-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 111 135788999999998776542110 0 00 11246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002468 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 450 (918)
Q Consensus 371 ~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~ 450 (918)
+++++ +.|+++|. ++....++ +++.+.+.. ..|. +.|.+ +++..+|+.||++|+||..
T Consensus 216 ~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPD----ARLVILGD-----GPLREELE----ALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCC----ceEEEEcC-----CccHHHHH----HHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 77665 45776664 22222333 444444321 1244 45664 4688999999999999999
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH---HHHHHHhcC
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 508 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA---~ai~~aL~m 508 (918)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999994 899999999998888 5679999999999994 555555543
No 97
>PLN02423 phosphomannomutase
Probab=99.76 E-value=6.8e-17 Score=173.72 Aligned_cols=191 Identities=17% Similarity=0.223 Sum_probs=118.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc-C---ceEEe
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 647 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l-~---l~lia 647 (918)
++++|+|+||||++. +..++++++++|++|.+ . +.++++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999976 45689999999999995 4 999999999999998888874 1 47899
Q ss_pred eCceEEEecCCeeeee--ccccCChHHHHHHHHHHHHHHhc-----CCCceeeeccceEEEEe--eccChh----hh---
Q 002468 648 ENGMFLRCTTGKWMTT--MPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG--- 711 (918)
Q Consensus 648 enGa~i~~~~~~w~~~--~~~~~~~~w~~~v~~il~~~~~~-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~--- 711 (918)
+||+++...+ ++... ++...+.+-...+.+.++.+... ..+.+++..+..+.+.+ .++... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 9999998543 33221 11112222223333333322111 12344443322222221 111101 00
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecC---CCCcH
Q 002468 712 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKDE 785 (918)
Q Consensus 712 --~~~a~el~~~L~~~~~~~~~l~v~-~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~---d~nDe 785 (918)
.....++.+.+ ...+....+.+. .|..++||.++|+|||.||+.|+ . +++++||||. +.||.
T Consensus 150 ~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 150 KVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred ccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcH
Confidence 01112333444 332333234333 34589999999999999999998 2 6899999994 49999
Q ss_pred HHHHHc
Q 002468 786 DVYAFF 791 (918)
Q Consensus 786 dMf~~~ 791 (918)
+||+.-
T Consensus 218 eMl~~~ 223 (245)
T PLN02423 218 EIFESE 223 (245)
T ss_pred HHHhCC
Confidence 999763
No 98
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.76 E-value=2.1e-17 Score=174.55 Aligned_cols=184 Identities=14% Similarity=0.097 Sum_probs=120.1
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC---ceEEeeCc
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 650 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~---l~liaenG 650 (918)
+|++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+...+..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~--------------~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCC--------------CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 5899999999976 22345559999999986 699999999999999999999885 46999999
Q ss_pred eEEEec-CCe-e---eeeccccCChHHHHHHHHHHHHHHhcCCC-ceeee-----------------------ccceEEE
Q 002468 651 MFLRCT-TGK-W---MTTMPEHLNMEWVDSLKHVFEYFTERTPR-SHFEQ-----------------------RETSLVW 701 (918)
Q Consensus 651 a~i~~~-~~~-w---~~~~~~~~~~~w~~~v~~il~~~~~~~~G-s~iE~-----------------------K~~sl~~ 701 (918)
+.+... ... + .... ...+ | +.+.++++.......- ..... +.....+
T Consensus 66 a~i~~~~~~~~~~~~~~~~-~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEELWREEPGYPRII-LGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCcccccCCCceEEe-cCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 999852 111 1 0010 1112 2 3344444432221000 00000 0011111
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCC
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 781 (918)
Q Consensus 702 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d 781 (918)
... .+++ ...++.+.+ .. .++.+..+..++||.|++++||.|+++++++++ ++++++++||| +
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 0111 112222233 21 245666677899999999999999999999998 67899999999 9
Q ss_pred CCcHHHHHHcCc
Q 002468 782 GKDEDVYAFFEP 793 (918)
Q Consensus 782 ~nDedMf~~~~~ 793 (918)
.||++||++++.
T Consensus 205 ~NDi~ml~~ag~ 216 (221)
T TIGR02463 205 PNDLPLLEVADY 216 (221)
T ss_pred HHHHHHHHhCCc
Confidence 999999999864
No 99
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.75 E-value=2.3e-17 Score=173.78 Aligned_cols=181 Identities=15% Similarity=0.211 Sum_probs=119.8
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENG 650 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenG 650 (918)
|+||+|+||||++. +..+++++.++|++|++ +|+.|+|+|||++..+...+..++ .++|++||
T Consensus 2 k~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NG 66 (215)
T TIGR01487 2 KLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENG 66 (215)
T ss_pred cEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccC
Confidence 79999999999975 45689999999999987 799999999999999999988884 47999999
Q ss_pred eEEEecCCeeeeeccccCChHHHHHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002468 651 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 730 (918)
Q Consensus 651 a~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 730 (918)
+.+...++. ....+ ....|........ .+....-...+ ......+... ... ...+...+ .. .
T Consensus 67 a~i~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~----~ 128 (215)
T TIGR01487 67 GVIFYNKED-IFLAN--MEEEWFLDEEKKK-RFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE----R 128 (215)
T ss_pred cEEEeCCCc-EEEec--ccchhhHHHhhhh-hhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----C
Confidence 999864332 11111 1111211000000 00000000000 0111111111 111 11222233 21 2
Q ss_pred CeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 731 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 731 ~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
++.+..+...+||.|.+++||.++++++++++ ++.+.+++||| +.||++||+.++.
T Consensus 129 ~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~ 184 (215)
T TIGR01487 129 GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGF 184 (215)
T ss_pred CeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCC
Confidence 45666566789999999999999999999998 56789999999 9999999999975
No 100
>PLN02275 transferase, transferring glycosyl groups
Probab=99.75 E-value=3.2e-16 Score=178.65 Aligned_cols=240 Identities=13% Similarity=0.009 Sum_probs=159.0
Q ss_pred CCCCEEEEeCCccch--HHHHHHhhCCCCeEEEEEcCCCCChhhhh-cC---CC----hHHHHHHH-HhCCEEeEeCHHH
Q 002468 211 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHR-TL---PS----RSDLLRAV-LAADLVGFHTYDY 279 (918)
Q Consensus 211 ~~~DiIwvHDyhL~l--lp~~lr~~~~~~~I~~flH~PfPs~e~fr-~l---P~----~~~ll~~l-l~aDlIgf~t~~~ 279 (918)
...|+|++|..+.+. ++..+-.+..+.|+.+.+|..+.+ .+. .. +. ...+.+.+ -.+|.|...+...
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~ 176 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAM 176 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 356999999877532 233332333467888888875321 110 00 10 01112222 3478888888765
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCH
Q 002468 280 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 280 ~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi 359 (918)
.+.+.+ ..+ .. +.++|+|+ .+.|.+.... ..++ .+...+|+++||+.+.||+
T Consensus 177 ~~~l~~----~~g------------~~--i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 177 QHELDQ----NWG------------IR--ATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHH----hcC------------CC--eEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCH
Confidence 554322 111 11 67889984 5777653211 1111 1244678899999999999
Q ss_pred HHHHHHHHHHHH-----------------hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 360 PQKLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 360 ~~~L~Af~~ll~-----------------~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
..+++|+..+.. .+|+ +.|+++|. |++..+++ +.+.+.+. ..+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~----~~~~~~~l-------~~v 288 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQKAMYE----EKISRLNL-------RHV 288 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCHHHHH----HHHHHcCC-------Cce
Confidence 999999988742 2454 66887763 45444444 44444322 246
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECC---CCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHH
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITE 497 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~S---l~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~ 497 (918)
+++.+.++.+++..+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~ 362 (371)
T PLN02275 289 AFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSE 362 (371)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHH
Confidence 77777899999999999999999853 2489999999999994 899999999988888 67899996 6999
Q ss_pred HHHHHHHHh
Q 002468 498 VANAIARAL 506 (918)
Q Consensus 498 lA~ai~~aL 506 (918)
+|++|.++|
T Consensus 363 la~~i~~l~ 371 (371)
T PLN02275 363 LADQLLELL 371 (371)
T ss_pred HHHHHHHhC
Confidence 999998875
No 101
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.74 E-value=3.9e-16 Score=174.65 Aligned_cols=195 Identities=21% Similarity=0.293 Sum_probs=146.0
Q ss_pred eEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccc--cCCHHHHHHHHHHHHHh-CcCccCcE
Q 002468 307 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 380 (918)
Q Consensus 307 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~--~KGi~~~L~Af~~ll~~-~P~~~~kv 380 (918)
.++.++|+|||.+.|.+... ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 47889999999988754311 1223333 34566666666654 89999999999987665 34 35
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCccCChhHHH
Q 002468 381 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 459 (918)
Q Consensus 381 ~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~-~~el~aly~~ADv~vv~Sl~EG~nLv~lE 459 (918)
.++++|... ... . . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~--~----~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEI--P----P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhh--h----c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 677666421 100 0 0 111 1244 568888 88999999999999999999999999999
Q ss_pred HHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Q 002468 460 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 536 (918)
Q Consensus 460 amA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~f 536 (918)
||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++|++|.++++.+ +++.++.++.++.+ ..+++...++.+
T Consensus 284 am~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99994 899999999998888 34799999999999999999999865 45666777777777 468888888888
Q ss_pred HHHHH
Q 002468 537 VSELN 541 (918)
Q Consensus 537 l~~l~ 541 (918)
++-++
T Consensus 359 ~~~y~ 363 (365)
T cd03825 359 LSLYE 363 (365)
T ss_pred HHHHh
Confidence 76554
No 102
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.74 E-value=5.7e-17 Score=175.38 Aligned_cols=181 Identities=16% Similarity=0.128 Sum_probs=121.7
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 651 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaenGa 651 (918)
||++|+||||++.. ..+.+.++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999862 2133468999999987 699999999999999999999885 479999999
Q ss_pred EEEecCCe------eeeeccccCChHHHHHHHHHHHHHHhcCCCcee--ee----------------------ccceEEE
Q 002468 652 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQ----------------------RETSLVW 701 (918)
Q Consensus 652 ~i~~~~~~------w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E~----------------------K~~sl~~ 701 (918)
++...++. |... ...+ .+.+.++++.+....+..+. .. ......+
T Consensus 66 ~i~~~~~~~~~~~~~~~~--~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIA--LGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEEEE--cCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99864332 2111 1122 25556666544332111110 00 0000000
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCC--CceEEEEec
Q 002468 702 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGH 779 (918)
Q Consensus 702 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~--~d~vlaiGD 779 (918)
.+ +++ ....+.+.+ . ...+.+..+..++||.|++++||.|+++++++++ ++ .+++++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 111222222 1 1245666666799999999999999999999998 56 899999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||++||+.++.
T Consensus 203 -~~ND~~Ml~~ag~ 215 (256)
T TIGR01486 203 -SPNDLPLLEVVDL 215 (256)
T ss_pred -CHhhHHHHHHCCE
Confidence 9999999999975
No 103
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.71 E-value=3.9e-16 Score=170.56 Aligned_cols=184 Identities=14% Similarity=0.167 Sum_probs=123.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
.|+||+|+||||++. ...+++.++++|++|.+ .|..|+|+|||+...+...+..++ .++|+.|
T Consensus 4 ~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 689999999999985 23567889999999986 699999999999999999999885 3799999
Q ss_pred ceEEEecCC--------------eeeeeccccCChHHHHHHHHHHHHHHhcCCCc--eeee-------------------
Q 002468 650 GMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQ------------------- 694 (918)
Q Consensus 650 Ga~i~~~~~--------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--~iE~------------------- 694 (918)
|+++...++ .|.... ..+ .+.+.++++.+....... ++..
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIEL--GPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEEc--CCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999985322 222111 122 234445544332211100 0000
Q ss_pred -c--cceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCC
Q 002468 695 -R--ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 771 (918)
Q Consensus 695 -K--~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~ 771 (918)
+ .....+-+ .+. ......+...+ . ..++.+..++.++||.|.+ +||.|++++++.++ +++
T Consensus 144 ~~~~~~~~~~~~--~~~---~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLW--NGS---EAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceee--cCc---hHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 0 00000000 000 01112222223 1 2246666777899999999 99999999999998 688
Q ss_pred -ceEEEEecCCCCcHHHHHHcCc
Q 002468 772 -DYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 772 -d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+++++||| +.||++||+.++.
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~ 228 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADI 228 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCe
Confidence 99999999 9999999999975
No 104
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.8e-15 Score=173.59 Aligned_cols=266 Identities=24% Similarity=0.235 Sum_probs=188.7
Q ss_pred CCCEEEEeCCccchHHHHHHhh---CCCCeEEEEEcCC-----CC-ChhhhhcCCCh-------------HHHHHHHHhC
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPSR-------------SDLLRAVLAA 269 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~---~~~~~I~~flH~P-----fP-s~e~fr~lP~~-------------~~ll~~ll~a 269 (918)
.+|||++||||+-|+|.++++. ...++.+|++|.- |+ .......||.. .-+--++..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5899999999999999999996 7789999999953 33 11112234410 1223346778
Q ss_pred CEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcC-------Cc----hHHHHHHHH
Q 002468 270 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-------NP----VQVHIKELQ 338 (918)
Q Consensus 270 DlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~-------~~----~~~~~~~lr 338 (918)
|.|..-++.|+..... ...|. .....+++ +..++.-|=||||.+.+.+.... .+ -.+....|+
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888888765441 11110 00011222 22466677888888776553221 00 112223355
Q ss_pred HHhc-----CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcc
Q 002468 339 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 413 (918)
Q Consensus 339 ~~~~-----~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~ 413 (918)
+.++ +.+++..|+||+..||++.+++|+..++++. ..||++|.+ + ..++..+..++.++.++
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~g---d----~~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGTG---D----PELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEecC---c----HHHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999986 346666653 1 25678888888887654
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-c--------
Q 002468 414 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 484 (918)
Q Consensus 414 ~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-g-------- 484 (918)
+. +.-..+..-...+|+.||++++||..|++||+-+++|.-+ .++|+.+.+|.++.+ .
T Consensus 351 ~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 VL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred EE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 32 2223455666789999999999999999999999999984 799999999999987 2
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhcCC
Q 002468 485 -AGAILVNPWNITEVANAIARALNMS 509 (918)
Q Consensus 485 -~~allVnP~D~~~lA~ai~~aL~m~ 509 (918)
.+|+++.|.|+++++.+|.+|+..-
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y 443 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLY 443 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHh
Confidence 3689998889999999999999864
No 105
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.69 E-value=5.4e-16 Score=156.34 Aligned_cols=156 Identities=27% Similarity=0.361 Sum_probs=120.0
Q ss_pred cCCeEEEEEecccccCCHHHHHHHHHHHHHh-CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 342 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 342 ~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~-~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
.++++|+++||+++.||+..+++|+..+.++ .++ +.|+++|. ++. ...+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~----~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEY----KKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCH----HHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----ccc----cccccccccccccc------c
Confidence 5789999999999999999999999999875 555 55776662 222 22333444443321 2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 498 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~l 498 (918)
.|.+ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3554 577789999999999999999999999999999999994 899999988888887 557899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 499 ANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 499 A~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
+++|.+++.++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555443
No 106
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.69 E-value=9.2e-15 Score=169.48 Aligned_cols=274 Identities=16% Similarity=0.130 Sum_probs=171.1
Q ss_pred HHHHhhcCCCCEEEEeCCccchHHHHHHh-hCCCCeEEEEEcCCCC-ChhhhhcCCChHHHHHHHH-hCCEEeEeCHHHH
Q 002468 204 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 280 (918)
Q Consensus 204 ~~i~~~~~~~DiIwvHDyhL~llp~~lr~-~~~~~~I~~flH~PfP-s~e~fr~lP~~~~ll~~ll-~aDlIgf~t~~~~ 280 (918)
.++++..+| |+|++|.+.++ |.++.. ...++|+.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 344555554 88888877765 444432 2335677665554222 22222211 23344443 5899999998887
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 359 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi 359 (918)
+.|.+ +|.. .. +.++|++ +.+.+.... .......+++.+ +++++|+++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~~----~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPPE----LAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCChh----hHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77653 2321 22 4566663 333322111 112234566666 678889999875 6889
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcc---cCCC----CcccEEEeCCCCCHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR---FGTL----TAVPIHHLDRSLDFP 432 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~---~g~~----~~~pV~~~~g~v~~~ 432 (918)
..+|+||+++++++|++ .|+++| ++++. .+++++++.+.+-. |... .-..| ++.+ +..
T Consensus 247 ~~ll~A~~~l~~~~~~~----~liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v-~l~~--~~~ 311 (425)
T PRK05749 247 ELVLDAHRALLKQFPNL----LLILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDV-LLGD--TMG 311 (425)
T ss_pred HHHHHHHHHHHHhCCCc----EEEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcE-EEEe--cHH
Confidence 99999999998888875 466554 34543 12344444443221 1000 00112 2222 357
Q ss_pred HHHHHHHHccEEEE-CCCCccCChhHHHHHHhcCCCCceEEEeCCCC-chh---hccCCeEEECCCCHHHHHHHHHHHhc
Q 002468 433 ALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ---SLGAGAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 433 el~aly~~ADv~vv-~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG-~~~---~lg~~allVnP~D~~~lA~ai~~aL~ 507 (918)
++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...| ..+ .+..+|.++.|.|++++|++|.++++
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhc
Confidence 99999999999665 688899999999999994 7888876543 222 33356888889999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 002468 508 MSPEEREKRHWHNFTHVTTH 527 (918)
Q Consensus 508 m~~~er~~r~~~~~~~v~~~ 527 (918)
++ +.++++.++.++++.++
T Consensus 388 ~~-~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 388 DP-DARQAYGEAGVAFLKQN 406 (425)
T ss_pred CH-HHHHHHHHHHHHHHHhC
Confidence 54 57778888888888765
No 107
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.68 E-value=8.1e-16 Score=181.31 Aligned_cols=187 Identities=15% Similarity=0.120 Sum_probs=124.3
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEee
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 648 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liae 648 (918)
++|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 5789999999999986 23466789999999997 699999999999999999988875 479999
Q ss_pred CceEEEecCCeee------------eeccccCChHHHHHHHHHHHHHHhcCC----------Cceeeecc-c--------
Q 002468 649 NGMFLRCTTGKWM------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRE-T-------- 697 (918)
Q Consensus 649 nGa~i~~~~~~w~------------~~~~~~~~~~w~~~v~~il~~~~~~~~----------Gs~iE~K~-~-------- 697 (918)
||+.+...++... .+.....+ .+.+.++++...+... +.++..+. .
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999985432100 01101122 2344444443332110 11111100 0
Q ss_pred ----------------eEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHh
Q 002468 698 ----------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEI 761 (918)
Q Consensus 698 ----------------sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l 761 (918)
+..+.+.. ++ ....++.+.+ . ...+++..|..++||. .++|||.|+++|++.+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~g-d~----e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~ 625 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIEG-DK----RSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF 625 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEcC-CH----HHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh
Confidence 00000000 00 1123333444 2 2256777799999999 5999999999999999
Q ss_pred CcCCCCCCCCceEEEE--ecCCCCcHHHHHHcCc
Q 002468 762 VHSKKMKTAIDYVLCI--GHFLGKDEDVYAFFEP 793 (918)
Q Consensus 762 ~~~~~~~~~~d~vlai--GD~d~nDedMf~~~~~ 793 (918)
+ ++.+.+++| || +.||.+||++++.
T Consensus 626 g------I~~~eViafalGD-s~NDisMLe~Ag~ 652 (694)
T PRK14502 626 R------LNFGNIHTFGLGD-SENDYSMLETVDS 652 (694)
T ss_pred C------CCccceEEEEcCC-cHhhHHHHHhCCc
Confidence 8 556788888 99 9999999999976
No 108
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.67 E-value=1.5e-15 Score=163.30 Aligned_cols=188 Identities=16% Similarity=0.191 Sum_probs=124.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 649 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~--l~liaen 649 (918)
+|+||+|+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 489999999999986 23567889999999997 699999999999999999999885 4899999
Q ss_pred ceEEEecCCeeeee-c-cc---cCChHH-------HHHHHHHHHHHHhcCC------------------Ccee------e
Q 002468 650 GMFLRCTTGKWMTT-M-PE---HLNMEW-------VDSLKHVFEYFTERTP------------------RSHF------E 693 (918)
Q Consensus 650 Ga~i~~~~~~w~~~-~-~~---~~~~~w-------~~~v~~il~~~~~~~~------------------Gs~i------E 693 (918)
|+.|..... |... . +. ..+..| ...++.+++....... |.-. .
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985432 3200 0 00 001111 2334444433322211 1111 1
Q ss_pred eccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe------------------C---CCCHHH
Q 002468 694 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 752 (918)
Q Consensus 694 ~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p------------------~---gvnKG~ 752 (918)
.+++|-.+++...+... .+.+ ...++.++.|..++.+.. . +.+||.
T Consensus 145 ~Re~SEp~~w~~~~~~~--------~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPARL--------REAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHHH--------HHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 23344445554322111 2222 223678888887777775 5 899999
Q ss_pred HHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 753 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 753 ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|++.|.+.+.-.. . .=.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~~---~-~~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRHL---G-PIKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhcc---C-CceEEEecC-ChhhHHHHHhCCe
Confidence 9999999886210 1 126899999 9999999999976
No 109
>PLN02382 probable sucrose-phosphatase
Probab=99.67 E-value=4.5e-16 Score=178.92 Aligned_cols=199 Identities=16% Similarity=0.212 Sum_probs=124.1
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHH-HHhhcCCCCcEEEEcCCChhhHHHHhccc----
Q 002468 567 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY---- 641 (918)
Q Consensus 567 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~~~~l---- 641 (918)
+..+.+.||++|+||||++..+ ...+++....+| +++.+ .+..++++|||++..+.++.+.+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~ 70 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLT 70 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCC
Confidence 3456788999999999997621 224665555555 87775 68999999999988877776555
Q ss_pred CceEEeeCceEEEecCC-----eeeeeccccCChHHHH-HHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHH
Q 002468 642 NLWLAAENGMFLRCTTG-----KWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQA 715 (918)
Q Consensus 642 ~l~liaenGa~i~~~~~-----~w~~~~~~~~~~~w~~-~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a 715 (918)
+..+|+.||+.|...+. .|.... +..|.. .+.+.+..+.........+.+...+.+++... ......
T Consensus 71 p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~---~~~~~~ 143 (413)
T PLN02382 71 PDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK---KAQEVI 143 (413)
T ss_pred CCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH---HhHHHH
Confidence 34588889999975321 122111 122321 12222222211111122333444555554321 111122
Q ss_pred HHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 716 RDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 716 ~el~~~L~~~~~~~~~l~v-~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.++.+.+ .. ....+.+ .++..++||.|+++|||.||+.|+++++..+ ++++.+++||| +.||++||+.++
T Consensus 144 ~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g---i~~~~~iafGD-s~NDleMl~~ag 214 (413)
T PLN02382 144 KELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG---KAPVNTLVCGD-SGNDAELFSVPD 214 (413)
T ss_pred HHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC---CChhcEEEEeC-CHHHHHHHhcCC
Confidence 3333333 21 1123443 4678899999999999999999999982111 67899999999 999999999986
No 110
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.65 E-value=1.1e-15 Score=162.19 Aligned_cols=186 Identities=16% Similarity=0.165 Sum_probs=117.4
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc--eEEeeCce
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 651 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l--~liaenGa 651 (918)
+||+|+||||++. . .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~-~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPP--------------G-YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCC--------------C-CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 5899999999984 1 245679999999997 6999999999999999999888864 79999999
Q ss_pred EEEecCC-------------eeeeeccccCChHHHHHHHHHHHHHHhcCCCceeee---ccceEEEEeeccChhhh----
Q 002468 652 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ---RETSLVWNYKYADVEFG---- 711 (918)
Q Consensus 652 ~i~~~~~-------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~---K~~sl~~hyr~ad~e~~---- 711 (918)
.|..... ... +.....+ .+.++++++...+..+-.++.. ...+ .+....+...
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 137 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVE---KLTGLPRELAPLAK 137 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHH---HHHCcCHHHHHHHH
Confidence 9985321 110 1111122 2344454443332111111100 0000 0000000000
Q ss_pred ------------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 712 ------------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 712 ------------~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
.....++.+.+ . ...+.++++..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 138 ~~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD 207 (225)
T TIGR02461 138 RREYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD 207 (225)
T ss_pred hhhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC
Confidence 01112233333 1 2356778887778874 4999999999999998621 24568999999
Q ss_pred CCCCcHHHHHHcCc
Q 002468 780 FLGKDEDVYAFFEP 793 (918)
Q Consensus 780 ~d~nDedMf~~~~~ 793 (918)
+.||++||+++..
T Consensus 208 -~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 -SENDFPMFEVVDL 220 (225)
T ss_pred -CHHHHHHHHhCCC
Confidence 9999999999965
No 111
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.59 E-value=3.4e-15 Score=160.73 Aligned_cols=187 Identities=18% Similarity=0.292 Sum_probs=117.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc----CceEEe
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLAA 647 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l----~l~lia 647 (918)
++||++|+||||++. +..-..++.+.++ ....++..++++|||+...+.+.+... +.++|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 689999999999921 1122356667776 334568889999999999999888865 457999
Q ss_pred eCceEEEecCCeeeeec--cccCChHHH-HHHHHHHHHHHhcCCCcee----eeccceEEEEeeccChhhhHHHHHHHHH
Q 002468 648 ENGMFLRCTTGKWMTTM--PEHLNMEWV-DSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDMLQ 720 (918)
Q Consensus 648 enGa~i~~~~~~w~~~~--~~~~~~~w~-~~v~~il~~~~~~~~Gs~i----E~K~~sl~~hyr~ad~e~~~~~a~el~~ 720 (918)
++|+.|.... .|.... .......|. +.+.+++..+ ++... +...+.+++.+...+.. ....++.+
T Consensus 67 svGt~I~~~~-~~~~d~~w~~~i~~~w~~~~v~~~l~~~----~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~ 138 (247)
T PF05116_consen 67 SVGTEIYYGE-NWQPDEEWQAHIDERWDRERVEEILAEL----PGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRA 138 (247)
T ss_dssp TTTTEEEESS-TTEE-HHHHHHHHTT--HHHHHHHHHCH----CCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHH
T ss_pred cCCeEEEEcC-CCcChHHHHHHHHhcCChHHHHHHHHHh----hCcccCCccccCCeeEEEEEecccch---hHHHHHHH
Confidence 9999998622 332110 011122343 3344444433 33222 22334455555543322 12344555
Q ss_pred HHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 721 HLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 721 ~L~~~~~~~~~l~v~~-G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
.+ .. ....+.++. +...++|.|++++||.||+.|+++++ ++.+.++++|| +.||.+||...
T Consensus 139 ~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 139 RL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp HH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred HH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 55 22 123455554 67889999999999999999999998 67899999999 99999999554
No 112
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.58 E-value=4.3e-14 Score=152.60 Aligned_cols=185 Identities=17% Similarity=0.196 Sum_probs=142.1
Q ss_pred HHHhccccCC--Cc-eeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHH
Q 002468 288 TRILGFEGTP--EG-VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL 363 (918)
Q Consensus 288 ~r~lg~~~~~--~~-i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L 363 (918)
.|+++++++. ++ ++-.-...+|.++||-|+++.|.|.+.. +. .+...|+.++||.|+||++.++
T Consensus 147 d~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~ 214 (426)
T KOG1111|consen 147 DRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLL 214 (426)
T ss_pred CcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHH
Confidence 4555555542 22 2322345689999999999999985431 12 3457899999999999999999
Q ss_pred HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002468 364 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443 (918)
Q Consensus 364 ~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 443 (918)
..+.++.+++|+.+ ++++| |||..-.|++.+++. +. ..+|. +.|.++++++...|...||
T Consensus 215 ~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 215 EIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred HHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcE
Confidence 99999999999854 77664 667655566555544 11 13566 5799999999999999999
Q ss_pred EEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcC
Q 002468 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 508 (918)
Q Consensus 444 ~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m 508 (918)
|+.||+.|.||++++||+.|+ .++|.+..+|..+.|.++-+...+-.++++++++.++++.
T Consensus 275 FlntSlTEafc~~ivEAaScG----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCG----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCC----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 999999999999999999994 7888889999999995453445566788999999888863
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.54 E-value=1.3e-12 Score=149.18 Aligned_cols=263 Identities=17% Similarity=0.135 Sum_probs=160.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH-HHHHHhCCEEeEeCHHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
++.++|.+..-...+... .+..++++-+|=-|+.... .-+....+ -..+-.||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~--~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPG--GPPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCC--CCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 566888876544444333 4456666654433322110 00111111 22345789998887765543211
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 370 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll 370 (918)
.+ .++.++|+|+|.+.|.+....+.. .+.+ ...++++|+|+|++.+.+++. +|.++ .
T Consensus 171 ------------~~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 ------------LN--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred ------------CC--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 11 357789999999999764322110 0111 124678999999999966654 44443 3
Q ss_pred HhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002468 371 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 449 (918)
Q Consensus 371 ~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl- 449 (918)
+.+|++ .|++||... ... +. .++ .. ...|+ +.|.++.+++.++|+.|||+++|+.
T Consensus 228 ~~~p~~----~~vliG~~~--~~~---~~----~~~----~~------~~nV~-~~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDW----SFVLIGPVD--VSI---DP----SAL----LR------LPNVH-YLGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCC----EEEEECCCc--Ccc---Ch----hHh----cc------CCCEE-EeCCCCHHHHHHHHHhCCEEecCCcc
Confidence 457876 477676420 000 00 111 00 12365 5789999999999999999999986
Q ss_pred ----CccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 450 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 450 ----~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
.+++++..+|||||+ .|+|.|....+.+.. .+ ..+.+.|+++++++|.++|..+..++..+. ...+.
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~~-~~-~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRYE-DE-VVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhhc-Cc-EEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999994 788888765544332 33 444467999999999998765543333322 22678
Q ss_pred hcCHHHHHHHHHHHHH
Q 002468 526 THTAQEWAETFVSELN 541 (918)
Q Consensus 526 ~~~~~~W~~~fl~~l~ 541 (918)
.|||..=++.++..|.
T Consensus 355 ~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 355 QNSWDARAAEMLEALQ 370 (373)
T ss_pred HCCHHHHHHHHHHHHH
Confidence 8888887777775554
No 114
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.49 E-value=9.6e-12 Score=142.49 Aligned_cols=215 Identities=10% Similarity=0.056 Sum_probs=137.9
Q ss_pred hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 002468 268 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 344 (918)
Q Consensus 268 ~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 344 (918)
.+|.+...+....+.+.. .|. ...+|.+++++||.+.+.+. + ....+|+++ +++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 578888766554333321 122 23467778889987544321 1 122355555 367
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHh----CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~----~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
++|+++||....|++..+++++..++.. .|+ +.++.+++ +++ .+++++++... + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G----~~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICG----RNK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEEC----CCH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 233 33333442 122 22333433210 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCC-----CCchhhccCCeEEECCCCH
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 495 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~-----aG~~~~lg~~allVnP~D~ 495 (918)
.|+ +.|+++ ++..+|++||++|.+| .+++++|||||+ .|+|++.. .|.++.+-++|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 354 567774 7999999999999866 378999999995 89999985 2334444123333345899
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 002468 496 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 537 (918)
Q Consensus 496 ~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 537 (918)
++++++|.++|.+.++.++++.+++++....+....-++..+
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 999999999999745567777777777776666555554444
No 115
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.43 E-value=9e-12 Score=142.78 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=168.7
Q ss_pred HHHHhCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--
Q 002468 264 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 341 (918)
Q Consensus 264 ~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-- 341 (918)
+....+|.+.-.++-..+.|.. .+..++. ..+.+...+||.+.+.+...... .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~---~~~~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKA---TFVSLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhh---hhhhcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 3456678776555544444432 2222221 11455666788776653211100 00011111111
Q ss_pred -cCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCcc-CcEEEEEEEcC-CCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 342 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 342 -~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~-~kv~Lvqig~p-sr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
..+.++..+-|..|-||+...|.||..+...-|+.. ....++..+.+ +-+..++..++.+++.+++++.+.. |
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C---
Confidence 236788999999999999999999999988775411 12455545533 2233445555667777787775321 2
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHH
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 496 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~ 496 (918)
.+++|....++.+.+.+++.+.+.++++..|-||+|++|||||+ .|+|++..+|.+|.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 34556678888888899999999999999999999999999995 899999999999998 789999999 666
Q ss_pred ---HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHh
Q 002468 497 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDT 543 (918)
Q Consensus 497 ---~lA~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~ 543 (918)
.+|++|.++..++. .+.+++++.+++|.+ |++ +.|.+.+...
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~ 464 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASV 464 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHH
Confidence 59999999999764 588888899999977 655 4454444443
No 116
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.38 E-value=4.6e-11 Score=129.18 Aligned_cols=197 Identities=25% Similarity=0.336 Sum_probs=141.4
Q ss_pred EEEEeeCCcChhhhhhh-hcCCchHHHHHHHHHHhcC--CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEE
Q 002468 308 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 384 (918)
Q Consensus 308 ~v~v~P~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq 384 (918)
++.++|+|+|++.+... .. ...+ ..+++++||+.+.||+...++|+..+....++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 57788999999988742 10 0112 36899999999999999999999998877665 45666
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhc
Q 002468 385 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464 (918)
Q Consensus 385 ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~ 464 (918)
+|..... ...+. +++.+.+.. ..|. +.|.++.+++..+|+.||++++||..||||++++|||||+
T Consensus 236 ~g~~~~~----~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELE----KLAKKLGLE------DNVK-FLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHH----HHHHHhCCC------CcEE-EecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 12222 233333221 1344 4788888899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCchhhccCC--eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 002468 465 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 541 (918)
Q Consensus 465 ~~~~g~lIlSe~aG~~~~lg~~--allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 541 (918)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.++......++.+ ..+++..-+..++.-+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 789999999888888443 77888889999999999999987 34444444344444 46666555554444443
No 117
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.32 E-value=6.6e-10 Score=126.98 Aligned_cols=270 Identities=13% Similarity=0.082 Sum_probs=160.3
Q ss_pred HHHHHhhcCCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHH
Q 002468 203 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 282 (918)
Q Consensus 203 a~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~ 282 (918)
..++++..+ .|+|+.| +....++.+.+....++|+...+ +-|-.. ...+. -.+|.+...+....+.
T Consensus 96 l~~~l~~~~-pD~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~~--------~~~~~---~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEK-PDIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCLH--------KIWVH---REVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhC-cCEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCCC--------ccccc---CCCCEEEECCHHHHHH
Confidence 344444444 5898885 55566776666656667765333 222110 01111 1578888877655444
Q ss_pred HHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhc---CCe-EEEEEecccccCC
Q 002468 283 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKG 358 (918)
Q Consensus 283 Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-vIl~VdRLd~~KG 358 (918)
+.+ .|.. ..++.++++.++. .|.... + ...++++++ +++ +++..|++...||
T Consensus 162 l~~-----~gi~-----------~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGVP-----------PEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCCC-----------hhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 332 1221 2244444333332 343211 1 112445552 444 4556799999999
Q ss_pred HHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002468 359 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 438 (918)
Q Consensus 359 i~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 438 (918)
+..+++++.. .|+ +.++++++. +.+ +++++++++...+ ..|++ .|+++ ++..+|
T Consensus 218 ~~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~~--~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYVE--NIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eechh--hHHHHH
Confidence 9999888742 354 446655532 222 3344555543322 13654 47764 588999
Q ss_pred HHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC-CCCc----hhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHH
Q 002468 439 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEER 513 (918)
Q Consensus 439 ~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-~aG~----~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er 513 (918)
+.||++|. ++.|++++|||||+ .|+|++. ..|. +..+...|..+.+.|+++++++|.++++++ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999995 7888876 4442 122333455556789999999999999864 456
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 002468 514 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 545 (918)
Q Consensus 514 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 545 (918)
+++.++.++....+++...++.+++.+....+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 66666666767777888888877776655433
No 118
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.30 E-value=1.4e-10 Score=119.88 Aligned_cols=118 Identities=27% Similarity=0.319 Sum_probs=85.1
Q ss_pred EEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCC
Q 002468 349 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 428 (918)
Q Consensus 349 ~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~ 428 (918)
++||+.+.||+..+++|+..+.+++|+ +.++++|... +. . .....+ ... +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~--~~-~--~~~~~~----~~~----~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGP--ER-E--YLEELL----AAL----LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCC--Ch-H--HHHHHH----Hhc----CC--cccEEE-eCC
Confidence 999999999999999999999888776 5577777432 11 1 111111 111 11 124654 456
Q ss_pred C-CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEE
Q 002468 429 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 490 (918)
Q Consensus 429 v-~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allV 490 (918)
+ +.+++..+++.||++++||..|||+++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666666677999999999999999999999994 899999999988766 3456553
No 119
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.29 E-value=5.3e-10 Score=125.68 Aligned_cols=241 Identities=16% Similarity=0.139 Sum_probs=147.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|+.|.....+ +..+..+..+.|+.++.|..||. .. +.+ ....+|.|...++...+. +
T Consensus 89 ~pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~--~~~~~~~vi~~s~~~~~~--------~ 149 (350)
T cd03785 89 KPDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRL--LARFADRVALSFPETAKY--------F 149 (350)
T ss_pred CCCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHH--HHHhhCEEEEcchhhhhc--------C
Confidence 36999998755433 33333344467776655544432 10 111 112367777766543221 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCeEEEEEecccccCCHHHHH-HHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKL-LAFE 367 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vIl~VdRLd~~KGi~~~L-~Af~ 367 (918)
...++.++|+|+|.+.|.+.. . ++++ +++++|+.+++....|+...++ .|++
T Consensus 150 -------------~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~ 205 (350)
T cd03785 150 -------------PKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEAVPEALA 205 (350)
T ss_pred -------------CCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHH
Confidence 124677899999988765321 0 2222 3677888898888888887655 7777
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
.+.+ ++ +.++.++++ + +.+++++ .+.+. + ..|+ +.+.+ +++..+|+.||++|.+
T Consensus 206 ~l~~--~~----~~~~~i~G~----g-~~~~l~~----~~~~~----~----~~v~-~~g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 206 ELLR--KR----LQVIHQTGK----G-DLEEVKK----AYEEL----G----VNYE-VFPFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred Hhhc--cC----eEEEEEcCC----c-cHHHHHH----HHhcc----C----CCeE-Eeehh--hhHHHHHHhcCEEEEC
Confidence 6642 22 333333322 2 2233443 33322 1 1244 45665 7899999999999987
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCC--CHHHHHHHHHHHhcCCHHHHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMSPEEREK 515 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG--------~~~~l--g~~allVnP~--D~~~lA~ai~~aL~m~~~er~~ 515 (918)
| | +.+++|||+|+ .|+|++...| .++.+ +..|++|+|. |.++++++|..+|.. ++.++.
T Consensus 260 s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~ 330 (350)
T cd03785 260 A---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD-PERLKA 330 (350)
T ss_pred C---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HHHHHH
Confidence 7 3 57899999994 7888876543 13444 3568999987 999999999999974 456666
Q ss_pred HHHHHHHHHHhcCHH
Q 002468 516 RHWHNFTHVTTHTAQ 530 (918)
Q Consensus 516 r~~~~~~~v~~~~~~ 530 (918)
+..+.++++..+...
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (350)
T cd03785 331 MAEAARSLARPDAAE 345 (350)
T ss_pred HHHHHHhcCCCCHHH
Confidence 667777766554433
No 120
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.26 E-value=5.4e-10 Score=126.42 Aligned_cols=251 Identities=16% Similarity=0.075 Sum_probs=157.5
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|+.|+....+.+.++ .+..+.|+.++.|..+|.. .+.++ ...+|.+...+++- +. .
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~~----~-- 150 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---FP----E-- 150 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---hh----c--
Confidence 3699999985544443433 3445678877666544320 01111 12456555444311 10 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHH-HHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 369 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L-~Af~~l 369 (918)
....++.++|+|||.+.+.+. ... .++ .. ++.++|+.+|+....|++..++ +|++++
T Consensus 151 ------------~~~~~i~vi~n~v~~~~~~~~----~~~---~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 151 ------------FFKPKAVVTGNPVREEILALA----APP---ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ------------cCCCCEEEECCCCChHhhccc----chh---hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 123578899999998766531 100 111 12 3678889999999999987777 888776
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002468 370 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 449 (918)
Q Consensus 370 l~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl 449 (918)
... | ..++++|. ++ .+++.+.+ . . +. . |. +.+++ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~~----~-~----~~---~-v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAAY----A-A----GI---N-AE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHHh----h-c----CC---c-EE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 23555543 22 12222222 1 1 11 1 43 45665 68899999999999987
Q ss_pred CccCChhHHHHHHhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHH
Q 002468 450 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 517 (918)
Q Consensus 450 ~EG~nLv~lEamA~~~~~~g~lIlSe~aG--------~~~~l--g~~allVnP~D--~~~lA~ai~~aL~m~~~er~~r~ 517 (918)
| +.+++|||+|+ .|+|++...| .++.+ +..|++++|.| +++++++|.++|++ ++.++.+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 7888775432 12334 35688998888 99999999999997 45677777
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Q 002468 518 WHNFTHVTTHTAQEWAETFVSEL 540 (918)
Q Consensus 518 ~~~~~~v~~~~~~~W~~~fl~~l 540 (918)
++.+++...++...-++.+++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHh
Confidence 77777777777777777666544
No 121
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.22 E-value=7.6e-10 Score=124.27 Aligned_cols=181 Identities=16% Similarity=0.132 Sum_probs=117.9
Q ss_pred EEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-cCCeEEEEEecccccCCHHHHH-HHHHHHHHhCcCccCcEEEEEEEc
Q 002468 310 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKFLEENSDWRGKVVLLQIAV 387 (918)
Q Consensus 310 ~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vIl~VdRLd~~KGi~~~L-~Af~~ll~~~P~~~~kv~Lvqig~ 387 (918)
.++|+|||...+.+.. + .+.+ .+ ++.++|+++||....|++..++ .|++.+.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~~--~-----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P-----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhcccc--h-----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 5889999976654321 0 0111 12 3677899999998899976654 788776542 22 2333332
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCC
Q 002468 388 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 467 (918)
Q Consensus 388 psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~ 467 (918)
+++. . ++++.+.+.+. ..++.+. . .++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-~----~l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-E----KVKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-H----HHHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 2 33344333221 1233232 2 37899999999999875 4 68999999994
Q ss_pred CceEEEeCCCCc-------hhhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 002468 468 KGVLILSEFAGA-------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 534 (918)
Q Consensus 468 ~g~lIlSe~aG~-------~~~l--g~~allVnP~D--~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 534 (918)
.|+|++...|. ++.+ +.+|++++|.| +++++++|.++++. ++.++++.++.++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 78888876552 2344 46789999876 99999999999975 4567777777777777666655543
No 122
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.18 E-value=4e-09 Score=119.95 Aligned_cols=241 Identities=15% Similarity=0.138 Sum_probs=141.4
Q ss_pred CCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHH--hCCEEeEeCHHHHHHHHHHHHHH
Q 002468 213 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 290 (918)
Q Consensus 213 ~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~r~ 290 (918)
.|+|++|......+...+-....++|+++..+-. -+.+.+. |+.+++.+-+. .+|++.-.+....+++++
T Consensus 87 pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~----- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR----- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH-----
Confidence 5999999544443433333334467876532211 1111111 12223322222 257766677766666543
Q ss_pred hccccCCCceeeCCeeeEEEEeeCCc-ChhhhhhhhcCCchHHHHHHHHHHhc-CCeEEEE-Eeccc-ccCCHHHHHHHH
Q 002468 291 LGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA-GRKVMLG-VDRLD-MIKGIPQKLLAF 366 (918)
Q Consensus 291 lg~~~~~~~i~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vIl~-VdRLd-~~KGi~~~L~Af 366 (918)
+|. ...+|.++++|+ |...+.... . ....++++++ ++.+++. ..|.. ..||+..+++|+
T Consensus 159 ~G~-----------~~~~I~vign~~~d~~~~~~~~-~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~ 221 (365)
T TIGR00236 159 ENV-----------KADSIFVTGNTVIDALLTNVEI-A-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAI 221 (365)
T ss_pred cCC-----------CcccEEEeCChHHHHHHHHHhh-c-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHH
Confidence 132 235788999996 543222111 0 1123444453 3345555 44643 459999999999
Q ss_pred HHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002468 367 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 446 (918)
Q Consensus 367 ~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv 446 (918)
.++.+++|++ .++.++.|. +. .+.++ ...++ . ...|+ |.+.+...++..+|+.||+++.
T Consensus 222 ~~l~~~~~~~----~~vi~~~~~----~~---~~~~~---~~~~~----~--~~~v~-~~~~~~~~~~~~~l~~ad~vv~ 280 (365)
T TIGR00236 222 REIVEEFEDV----QIVYPVHLN----PV---VREPL---HKHLG----D--SKRVH-LIEPLEYLDFLNLAANSHLILT 280 (365)
T ss_pred HHHHHHCCCC----EEEEECCCC----hH---HHHHH---HHHhC----C--CCCEE-EECCCChHHHHHHHHhCCEEEE
Confidence 9998888875 355444332 11 12222 22221 1 12355 5678899999999999999998
Q ss_pred CCCCccCChhHHHHHHhcCCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCC
Q 002468 447 TSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMS 509 (918)
Q Consensus 447 ~Sl~EG~nLv~lEamA~~~~~~g~lIlS-e~aG~~~~l-g~~allVnP~D~~~lA~ai~~aL~m~ 509 (918)
+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...+++| |.|+++++++|.++|+.+
T Consensus 281 ~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 281 DS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred CC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh
Confidence 88 45689999994 788886 455555544 2345666 589999999999999854
No 123
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.18 E-value=2e-08 Score=120.56 Aligned_cols=149 Identities=15% Similarity=0.115 Sum_probs=109.7
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHH--hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 420 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~--~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 420 (918)
+..+|..|.|+...||+..++.+++++++ ++|+. .+.+|..|.+...+... +++.+.+..++.+- .|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~~--~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKRP--EFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhcc--cCC----C
Confidence 45688899999999999999999999975 55552 47888777654443222 34555665555430 021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECC----
Q 002468 421 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 492 (918)
Q Consensus 421 pV~~~~g~v~~~el~aly~~ADv~vv-~Sl-~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP---- 492 (918)
.|.++.+ .+..--..+|..||+++. ||. +|..|+.=+=||.- |.|.+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 4665554 455555678999999999 887 99999999999985 788888887776654 568999985
Q ss_pred --------CCHHHHHHHHHHHh
Q 002468 493 --------WNITEVANAIARAL 506 (918)
Q Consensus 493 --------~D~~~lA~ai~~aL 506 (918)
.|.+++-++|.+++
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai 554 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEV 554 (601)
T ss_pred cccccccCCCHHHHHHHHHHHH
Confidence 88899999998877
No 124
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.16 E-value=5.1e-09 Score=118.42 Aligned_cols=244 Identities=15% Similarity=0.061 Sum_probs=141.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|++|.+....++..+..+..++|+.++.|--. +.+ +..|+...-....-.+|++...+....+++.+ .
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~-----~ 159 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAIDKLSDLHFAPTEEARRNLLQ-----E 159 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHHHHhhhccCCCHHHHHHHHH-----c
Confidence 469999998766656555544445788876554211 000 01122110000112356555555444443322 1
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCc-ChhhhhhhhcCCchHHHHHHHHHHh--c-CCeEEEEEecccc---cCCHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQKLL 364 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~vIl~VdRLd~---~KGi~~~L~ 364 (918)
|. ...+|.++++++ |...+....... ...++.+ + ++.+++.++|+.. .||+..+++
T Consensus 160 G~-----------~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~ 222 (363)
T cd03786 160 GE-----------PPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILE 222 (363)
T ss_pred CC-----------CcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHH
Confidence 21 345678888885 654443221110 0111222 2 3456778999875 799999999
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
|++.+... ++.++..+. .+.+..++ +.+.+.+.. ...|+ +.+....+++..+|+.||++
T Consensus 223 al~~l~~~------~~~vi~~~~-----~~~~~~l~----~~~~~~~~~-----~~~v~-~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 223 ALAELAEE------DVPVVFPNH-----PRTRPRIR----EAGLEFLGH-----HPNVL-LISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred HHHHHHhc------CCEEEEECC-----CChHHHHH----HHHHhhccC-----CCCEE-EECCcCHHHHHHHHHcCcEE
Confidence 99887432 244443322 22233333 333333210 01354 45667789999999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCC-CHHHHHHHHHHHhcCCH
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 510 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~-D~~~lA~ai~~aL~m~~ 510 (918)
|.+|- | +..|||+|+ .|+|++...+....+..+|+.+.+. |+++++++|.++|+++.
T Consensus 282 v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 282 LTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 99994 4 479999994 7888887655454443566555443 79999999999998753
No 125
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.15 E-value=2.6e-10 Score=115.88 Aligned_cols=191 Identities=17% Similarity=0.226 Sum_probs=116.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc---CceEEe
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 647 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l---~l~lia 647 (918)
..++||+|+||||++..-+| +.....|.+|.. .|..|+.||..+..++..+-+.+ +..+|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35799999999999964333 234566777774 69999999999999998877776 478999
Q ss_pred eCceEEEecCCeeeeec--c------ccCCh-HHHHHHHHHHHHHHhcCCCceee----------------------ecc
Q 002468 648 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 696 (918)
Q Consensus 648 enGa~i~~~~~~w~~~~--~------~~~~~-~w~~~v~~il~~~~~~~~Gs~iE----------------------~K~ 696 (918)
|||+.|..+. .|...- + ..... .-.+.+++.++...+...-.++. .++
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998432 222100 0 00000 11233444443332211111110 111
Q ss_pred ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEE
Q 002468 697 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 776 (918)
Q Consensus 697 ~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vla 776 (918)
++.++-.+..| +.+.++ ...+...++.+++|....-|....-.||.|++.+++.+..- ....-++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEEEe
Confidence 11111111111 111111 22223347899999888888877778999999999977521 12334899
Q ss_pred EecCCCCcHHHHHHcCc
Q 002468 777 IGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 777 iGD~d~nDedMf~~~~~ 793 (918)
+|| +.||.+||+.+..
T Consensus 215 ~GD-g~nD~Pl~ev~d~ 230 (274)
T COG3769 215 LGD-GPNDAPLLEVMDY 230 (274)
T ss_pred cCC-CCCcccHHHhhhh
Confidence 999 9999999998755
No 126
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.15 E-value=8.7e-09 Score=118.58 Aligned_cols=261 Identities=11% Similarity=0.087 Sum_probs=152.9
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
..|+|.++ +....+..+.+....++|+.. +++-+-.... | + --.+|.+...+....+.+.+ .
T Consensus 104 kPDvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w---~---~~~~d~~~v~s~~~~~~l~~-----~ 165 (391)
T PRK13608 104 KPDLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W---I---TPYSTRYYVATKETKQDFID-----V 165 (391)
T ss_pred CcCEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c---c---cCCCCEEEECCHHHHHHHHH-----c
Confidence 45888875 233333333333445677743 4444411100 1 1 12478877777654444432 1
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh---cCCe-EEEEEecccccCCHHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQKLLAFE 367 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-vIl~VdRLd~~KGi~~~L~Af~ 367 (918)
|. ...+|.++++.|+. .|..... ...+++++ ++++ +++++||+...||+..+++++
T Consensus 166 gi-----------~~~ki~v~GiPv~~-~f~~~~~-------~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~- 225 (391)
T PRK13608 166 GI-----------DPSTVKVTGIPIDN-KFETPID-------QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI- 225 (391)
T ss_pred CC-----------CHHHEEEECeecCh-Hhccccc-------HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH-
Confidence 22 12356666666664 3432211 12334444 2444 556799999999999999985
Q ss_pred HHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002468 368 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 447 (918)
Q Consensus 368 ~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~ 447 (918)
++..|+ +.++++++. .+ ++.+++.+. ++. . ..|+ +.|++ +++..+|+.||++|..
T Consensus 226 --~~~~~~----~~~vvv~G~----~~---~l~~~l~~~---~~~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~k 280 (391)
T PRK13608 226 --LAKSAN----AQVVMICGK----SK---ELKRSLTAK---FKS----N--ENVL-ILGYT--KHMNEWMASSQLMITK 280 (391)
T ss_pred --HhcCCC----ceEEEEcCC----CH---HHHHHHHHH---hcc----C--CCeE-EEecc--chHHHHHHhhhEEEeC
Confidence 344454 345555431 22 122333332 111 0 1354 45766 5799999999999864
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh-----ccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 522 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~-----lg~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~ 522 (918)
+.|+++.|||||+ .|+|++...+..+. +.+.|.-+-+.|.++++++|.++++++ +.+.++.++.++
T Consensus 281 ----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (391)
T PRK13608 281 ----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQ 351 (391)
T ss_pred ----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Confidence 4589999999994 78888854322221 112333333669999999999999864 566777777788
Q ss_pred HHHhcCHHHHHHHHHHHHHHhH
Q 002468 523 HVTTHTAQEWAETFVSELNDTV 544 (918)
Q Consensus 523 ~v~~~~~~~W~~~fl~~l~~~~ 544 (918)
....++....++.+++.+....
T Consensus 352 ~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 352 DKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred hcCCCCHHHHHHHHHHHhhhhh
Confidence 8888888888888877665543
No 127
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.11 E-value=2.4e-08 Score=107.91 Aligned_cols=308 Identities=14% Similarity=0.236 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHh---hcC-CCCEEEEe--CCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHH
Q 002468 192 FAAYIKANQMFADVVNK---HYK-DGDVVWCH--DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 265 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~---~~~-~~DiIwvH--DyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ 265 (918)
|..+--.-|..+..|+. +++ ++| |||- .|.+. +|.+ |+ +.+.||+...|.|--|.+....+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 44444444444444432 244 455 5774 35443 2332 32 56899999999998888876654332111 1
Q ss_pred HHhCCEEeEeCHHHHHHHHHHHHHHhcccc---------CCCce-e-eCCeeeEEEEeeCCcChhhhhhhhcCCchHHHH
Q 002468 266 VLAADLVGFHTYDYARHFVSACTRILGFEG---------TPEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHI 334 (918)
Q Consensus 266 ll~aDlIgf~t~~~~~~Fl~~~~r~lg~~~---------~~~~i-~-~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~ 334 (918)
+...---.|-|.|..-- ...|.-. +.+-| + |+...+.+ |+|. .+++.+.....+
T Consensus 200 -----~l~~~KlaY~rlFa~lY-~~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPP-C~~e~lks~~~t------- 264 (465)
T KOG1387|consen 200 -----ILVWGKLAYWRLFALLY-QSAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPP-CSTEDLKSKFGT------- 264 (465)
T ss_pred -----hhhhHHHHHHHHHHHHH-HhccccceEEEecchhhHHHHHHHhhccceeE-EcCC-CCHHHHHHHhcc-------
Confidence 11111123445553211 1112110 00111 1 22222222 3343 555544322111
Q ss_pred HHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcC--ccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhc
Q 002468 335 KELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 412 (918)
Q Consensus 335 ~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~--~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~ 412 (918)
.-+....+|+|+...|.|+.. .|+-+..++.+.|. ....+.|+++|. .|+. +-++.-+.++.++.+++-
T Consensus 265 -----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRne--eD~ervk~Lkd~a~~L~i 335 (465)
T KOG1387|consen 265 -----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNE--EDEERVKSLKDLAEELKI 335 (465)
T ss_pred -----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCCh--hhHHHHHHHHHHHHhcCC
Confidence 112456899999999999999 78888888888887 334577887764 3432 222334566777777764
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchh-hc----c-CC
Q 002468 413 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL----G-AG 486 (918)
Q Consensus 413 ~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~-~l----g-~~ 486 (918)
. ..|. |.-.++.+++..+|..|-+.|-+-..|-||+.+.||||++ ..+|+-..+|..- .+ | .+
T Consensus 336 ~------~~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~t 404 (465)
T KOG1387|consen 336 P------KHVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETT 404 (465)
T ss_pred c------cceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCccc
Confidence 3 2355 4678999999999999999999999999999999999993 3334444444332 22 4 36
Q ss_pred eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 002468 487 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 542 (918)
Q Consensus 487 allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 542 (918)
|++. | +.++.|++|.+++.+..+||..+.+..|..+.+++-+...++|.+.+..
T Consensus 405 GFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 405 GFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred eeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 7776 3 5678999999999999999888888889999998888877777655443
No 128
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.01 E-value=4.7e-08 Score=115.95 Aligned_cols=276 Identities=12% Similarity=0.086 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHhh----cCCCCEEE--EeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHh
Q 002468 195 YIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLA 268 (918)
Q Consensus 195 Y~~vN~~fa~~i~~~----~~~~DiIw--vHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~ 268 (918)
|...+..++..+.+. ..++|++. ++.-|... +....|.-++.+..|+ -+. ....-...+..+-.
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-----~~~~y~~~l~~~~~ 272 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-----RHHTYLDLYESLSR 272 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-----cccchhhhhhChhh
Confidence 444444444444433 56788877 56666655 3333343334446665 111 00112456667778
Q ss_pred CCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEE
Q 002468 269 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVML 348 (918)
Q Consensus 269 aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl 348 (918)
+|.|...|.+-.+..... ++. .. ...+|..+|.+.- . .... ..++..++.|.+
T Consensus 273 ~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~-~-~~~~------------~s~r~~~~~I~v 325 (519)
T TIGR03713 273 ADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT-R-LRLG------------QSQQLYETEIGF 325 (519)
T ss_pred cCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce-E-EecC------------hhhcccceEEEE
Confidence 888777775533333221 110 00 1234556676544 1 1110 112234555666
Q ss_pred EEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC----------
Q 002468 349 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT---------- 418 (918)
Q Consensus 349 ~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~---------- 418 (918)
++||| +.|-+..+|+|+.++++++|+. .|.+.|..+ . .++.+.+++++.++|..++...
T Consensus 326 ~idrL-~ek~~~~~I~av~~~~~~~p~~----~L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 394 (519)
T TIGR03713 326 WIDGL-SDEELQQILQQLLQYILKNPDY----ELKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFFSLSEQDE 394 (519)
T ss_pred EcCCC-ChHHHHHHHHHHHHHHhhCCCe----EEEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhccccchhhh
Confidence 67799 9999999999999999999985 466555432 1 1234566677777765532110
Q ss_pred -----------cc-cEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--c
Q 002468 419 -----------AV-PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 484 (918)
Q Consensus 419 -----------~~-pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g 484 (918)
-. ..+.|.|..+..++...|.-|.++|.+|..|||+ ..+|||+.| .|.| .-|.++.+ |
T Consensus 395 ~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G----iPqI---nyg~~~~V~d~ 466 (519)
T TIGR03713 395 NQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG----IPQI---NKVETDYVEHN 466 (519)
T ss_pred hhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC----CCee---ecCCceeeEcC
Confidence 00 2344678888889999999999999999999999 999999983 4555 66677777 8
Q ss_pred CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 002468 485 AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 529 (918)
Q Consensus 485 ~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 529 (918)
.+|++| .|..++++||...|..+. .........++.+..++.
T Consensus 467 ~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 467 KNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred CCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 899999 799999999999998753 333444445555554443
No 129
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.00 E-value=7.7e-08 Score=108.35 Aligned_cols=239 Identities=14% Similarity=0.035 Sum_probs=142.8
Q ss_pred HHhhcCCCCEEEEeCCccch--HHH-HHHh-hCCCCeEEEEEcCCCCChhhhhcCC-ChHHHHHHHHhCCEEeEeCHHHH
Q 002468 206 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 280 (918)
Q Consensus 206 i~~~~~~~DiIwvHDyhL~l--lp~-~lr~-~~~~~~I~~flH~PfPs~e~fr~lP-~~~~ll~~ll~aDlIgf~t~~~~ 280 (918)
++..++++|+|++|...++. ++. +++. +..++++++++|--+|.. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 55668899999999864432 222 2222 112699999999876532 11111 12223344557899999988765
Q ss_pred HHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHH
Q 002468 281 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 360 (918)
Q Consensus 281 ~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~ 360 (918)
+.+.+ .|.. ..++.++|+..+...... +.....++.|+++|||....++.
T Consensus 136 ~~l~~-----~g~~-----------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGLT-----------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCCC-----------cCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 1221 123444444332211100 01123456899999999443211
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
+..|+ +.|+++|. +++.. .. ...|+ |.|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~-----g~~~~-----------~~--------~~~V~-f~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGP-----NPEDL-----------EN--------SANIS-YKGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECC-----Ccccc-----------cc--------CCCeE-EecCCCHHHHHHHHhc
Confidence 12344 45766653 22111 00 11355 5799999999999988
Q ss_pred ccEEEECCC-----------CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 002468 441 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 441 ADv~vv~Sl-----------~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~ 507 (918)
|+.+++.- .-.++--..|||||+ .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76666432 123444588999994 899999999999988 56789997 678899998874
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 002468 508 MSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 508 m~~~er~~r~~~~~~~v~ 525 (918)
.++++.++.++.++...
T Consensus 298 -~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 298 -TEEEYQEMVENVKKISK 314 (333)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 35666666666655554
No 130
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.00 E-value=2.4e-09 Score=103.54 Aligned_cols=129 Identities=26% Similarity=0.323 Sum_probs=89.0
Q ss_pred CeEEEEEecccccCCHHHHHH-HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 344 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 344 ~~vIl~VdRLd~~KGi~~~L~-Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|+++|. +++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~-----~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGN-----GPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECE-----SS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeC-----CHH------HHHHh-cC----------CCE
Confidence 357899999999999999999 99999999986 55777764 222 12222 00 246
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 499 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA 499 (918)
++ .|.+ +++.++|+.||+++.|+. .++++..++|||+++ .|+|+|.. |....+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 54 5777 689999999999999985 789999999999994 78888888 555554 2456666 89999999
Q ss_pred HHHHHHhc
Q 002468 500 NAIARALN 507 (918)
Q Consensus 500 ~ai~~aL~ 507 (918)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999986
No 131
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.99 E-value=6.8e-08 Score=110.22 Aligned_cols=150 Identities=19% Similarity=0.187 Sum_probs=97.2
Q ss_pred HHHHhc---CCeEE-EEE-ecccccCC-HHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhh
Q 002468 337 LQETFA---GRKVM-LGV-DRLDMIKG-IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 410 (918)
Q Consensus 337 lr~~~~---~~~vI-l~V-dRLd~~KG-i~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~I 410 (918)
++++++ ++++| +.. +|....|+ +..+++|++.+.+++|++ .+++++. +.+. ++++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~----~~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKR----REQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----Chhh----HHHHHHHHhhc
Confidence 444453 44543 333 46666544 788999999998888764 4665542 1222 23333443322
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe----------------
Q 002468 411 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 474 (918)
Q Consensus 411 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS---------------- 474 (918)
. |. .+.++. .++..+|+.||++|++| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 11 244332 47899999999999998 78889999994 788887
Q ss_pred -CCCCchhhccC----CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 002468 475 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 520 (918)
Q Consensus 475 -e~aG~~~~lg~----~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~ 520 (918)
.+.|.++.+.. .+++++..|+++++++|.++|+++ +.++++.+++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 45555666622 236778889999999999999865 3455544443
No 132
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.90 E-value=1.6e-06 Score=101.56 Aligned_cols=300 Identities=17% Similarity=0.209 Sum_probs=150.2
Q ss_pred EEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCC-------ChhhhhcCCC---hHH-----------HHH-HHHhCCEE
Q 002468 215 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---RSD-----------LLR-AVLAADLV 272 (918)
Q Consensus 215 iIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfP-------s~e~fr~lP~---~~~-----------ll~-~ll~aDlI 272 (918)
+.+.|.|..-+-..++|++.|.+.-.|+.|-.-+ ..++|..|+. .++ +-+ ....||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3477888877777789999999999999997533 1233444441 111 111 12334444
Q ss_pred eEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcC----CchHHHHHHH-HHHh-c----
Q 002468 273 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI----NPVQVHIKEL-QETF-A---- 342 (918)
Q Consensus 273 gf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~----~~~~~~~~~l-r~~~-~---- 342 (918)
..-+.--+. .|..+|+ |...| |.|||+|.+.|...-.- ...++++.++ +..+ +
T Consensus 226 TTVSeITa~----Ea~~LL~------------r~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK------------RKPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHHS------------S--SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHhC------------CCCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 333321111 2333333 22222 67999999877643110 0122333332 2222 1
Q ss_pred --CCeEEE-EEeccc-ccCCHHHHHHHHHHHHH---h-CcCccCcEEEEEEEcCCCCCh---H------HHHHHHHHHHH
Q 002468 343 --GRKVML-GVDRLD-MIKGIPQKLLAFEKFLE---E-NSDWRGKVVLLQIAVPTRTDV---P------EYQRLTSQVHE 405 (918)
Q Consensus 343 --~~~vIl-~VdRLd-~~KGi~~~L~Af~~ll~---~-~P~~~~kv~Lvqig~psr~~~---~------~y~~l~~~l~~ 405 (918)
++.+++ ..||.+ ..||++..|+|+.+|-. . ..+ ..|+.. |-.|..... + -+.+|++.+.+
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~--~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~ 365 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSD--KTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDE 365 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S---EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCC--CeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHH
Confidence 345554 499999 57999999999988743 2 222 123333 334554321 1 11233333332
Q ss_pred HHHhhhcc-----------------------------------------------------------c----CCCCcccE
Q 002468 406 IVGRINGR-----------------------------------------------------------F----GTLTAVPI 422 (918)
Q Consensus 406 lv~~IN~~-----------------------------------------------------------~----g~~~~~pV 422 (918)
+..+|..+ . ...+-+.|
T Consensus 366 i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKV 445 (633)
T PF05693_consen 366 IQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKV 445 (633)
T ss_dssp HHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEE
T ss_pred HHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEE
Confidence 22222100 0 01122344
Q ss_pred EEeCCCCC------HHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-------cCCeEE
Q 002468 423 HHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAIL 489 (918)
Q Consensus 423 ~~~~g~v~------~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-------g~~all 489 (918)
+|...+++ .-++..+.+.+|+.|+||.||++|.+++|+.|.+ .|.|.|+.+|....+ +..|+.
T Consensus 446 IF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 446 IFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp EE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred EEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHHHHHHHhhccCcCCcEE
Confidence 44333332 3467888999999999999999999999999994 799999999988654 134554
Q ss_pred E-CC--CCH----HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 002468 490 V-NP--WNI----TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 490 V-nP--~D~----~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
| += .+. +++|+.|.....++..+|.....+..+.....+|.+-...|..
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4 32 233 5667777777788877777666555554555555554444443
No 133
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.89 E-value=5.7e-07 Score=110.24 Aligned_cols=133 Identities=19% Similarity=0.134 Sum_probs=97.6
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHH--hCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~--~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
.+|.++.|+...|+...++..+++|.+ .+|+ ..+.||..|.+...+.+. +++.+++.+++..- +|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~p--~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRRP--EFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhCc--CCC----CcE
Confidence 378899999999999999999999865 3444 258888777654444321 34555555554410 221 146
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECC
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 492 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP 492 (918)
.|+.+ .+-.--..++..|||++.||. +|.-|+.=+=||.- |.|-+|-.-|.-.+. |.+|..+.+
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~ 617 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGD 617 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCC
Confidence 66554 455555678999999999999 99999999999884 899999988887766 778999988
No 134
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.51 E-value=3e-07 Score=87.61 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=48.1
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
+++||+||||++...... ......+.+.+.+.|++|.+ .|..++|+|||....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcC
Confidence 489999999998732100 00124678999999999997 589999999999999999887754
No 135
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.48 E-value=2.2e-05 Score=90.44 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=84.4
Q ss_pred CCeEEEE--Eecccc-cCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCc
Q 002468 343 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 419 (918)
Q Consensus 343 ~~~vIl~--VdRLd~-~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 419 (918)
++++|+. .+|..+ .|+++.+++|++.+.+++|+++ +++.+.+. ... +.++++....+ . .
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhC----C-C-
Confidence 5565543 459888 7999999999999988888753 44333221 111 22223333221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC-----------------CCCchhh
Q 002468 420 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 482 (918)
Q Consensus 420 ~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-----------------~aG~~~~ 482 (918)
..|..+.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13444432 3457999999999999 77788999995 7888772 2222222
Q ss_pred c-cCCeE--EE-CCCCHHHHHHHHHHHhcCC
Q 002468 483 L-GAGAI--LV-NPWNITEVANAIARALNMS 509 (918)
Q Consensus 483 l-g~~al--lV-nP~D~~~lA~ai~~aL~m~ 509 (918)
+ +.+++ ++ .-.+++.+++++.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22211 12 3347889999999999876
No 136
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.43 E-value=9e-07 Score=91.91 Aligned_cols=172 Identities=18% Similarity=0.260 Sum_probs=104.9
Q ss_pred HHHHHHHhhcCCCCcEEEEcCCChhhHHHHhc-c-c---CceEEeeCceEEEecCC-eeeeeccccCChHHHHHHHHHHH
Q 002468 608 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-E-Y---NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFE 681 (918)
Q Consensus 608 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~-~-l---~l~liaenGa~i~~~~~-~w~~~~~~~~~~~w~~~v~~il~ 681 (918)
+.+.|.+|.+ +..|+||||-++.-+++.+. . + -.++-++||...+..+. .|...+.+.+..+-...+.+.+.
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899986 79999999999999988774 2 2 24799999998875443 45433311111111222222222
Q ss_pred HHHhc-----CCCceeeeccceEEEEe--eccChh----hhHH----H-HHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 002468 682 YFTER-----TPRSHFEQRETSLVWNY--KYADVE----FGRI----Q-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 744 (918)
Q Consensus 682 ~~~~~-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~~~----~-a~el~~~L~~~~~~~~~l~v~~-G~~~vEI~ 744 (918)
.|... .-|.+||.++..+.+.- |+|..+ |..+ . -+.+.+.| ...+...++++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 22221 35899999999888753 333211 1110 0 12345555 4434556788766 57899999
Q ss_pred eCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec---CCCCcHHHHHHc
Q 002468 745 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---FLGKDEDVYAFF 791 (918)
Q Consensus 745 p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD---~d~nDedMf~~~ 791 (918)
|+||+|.-++++|.+. ..+.+++||| -+.||.++|...
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~ 198 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP 198 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC
Confidence 9999999999987553 2689999999 245899998764
No 137
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.39 E-value=1.8e-06 Score=78.35 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=72.6
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 520 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~ 520 (918)
|++-|+..+|+++..+|+|||+ +|+|.+...+....+ |..++.++ |+++++++|..+|+.| +++++..++.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888899999999999994 666666677877777 55688888 9999999999999965 6888888899
Q ss_pred HHHHH-hcCHHHHHHHHH
Q 002468 521 FTHVT-THTAQEWAETFV 537 (918)
Q Consensus 521 ~~~v~-~~~~~~W~~~fl 537 (918)
+++|. .|++.+=++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 88886 788777777665
No 138
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.38 E-value=7.9e-06 Score=82.46 Aligned_cols=184 Identities=18% Similarity=0.267 Sum_probs=119.8
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc--C-
Q 002468 566 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 642 (918)
Q Consensus 566 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l--~- 642 (918)
++++-..-|+.+|.||||++. ...++|++.+.|++|.. ...+-++-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 344555679999999999986 46789999999999875 7888899999888887777542 2
Q ss_pred -ceEEeeCceEEEecCCeeeeeccccCChHHH--HHHHHHHH----HHHhc----CCCceeeeccceEEEEe--eccCh-
Q 002468 643 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWV--DSLKHVFE----YFTER----TPRSHFEQRETSLVWNY--KYADV- 708 (918)
Q Consensus 643 -l~liaenGa~i~~~~~~w~~~~~~~~~~~w~--~~v~~il~----~~~~~----~~Gs~iE~K~~sl~~hy--r~ad~- 708 (918)
.+.-+|||..-...++... ...-..|. +.++++++ +..+- ..|.+||-+.-.+.+.- |++..
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4788999998765443211 11112232 23333332 22221 35888988776655432 33321
Q ss_pred ---hhhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 709 ---EFGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 709 ---e~~~-----~~a~el~~~L~~~~~~~~~l~v~~-G~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
+|.. ..-..+.+.| .+-+...++.... |.-.++|-|.||+|--.++.+-++ + .+.+-+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 1211 1112344555 4334556777655 467899999999999999887554 3 688999999
No 139
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.23 E-value=0.00014 Score=84.70 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 439 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 439 (918)
...|+|++.+.+..|+++ |=+ |.++ + +..+|.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999864 543 5433 1 11334344 22 2 23554554 45567899999
Q ss_pred HccEEEECCCCccCChhHHHHHHhcCCCCceEEEe--CCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCH
Q 002468 440 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--EFAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 510 (918)
Q Consensus 440 ~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS--e~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~ 510 (918)
.||++|.+|..||+++.+.||+.. |.+|+| ...|..+.+ ..|.+|++.|+++++++|.++|..+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999997 566665 455666666 55899999999999999999999774
No 140
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.18 E-value=2.6e-06 Score=85.60 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=55.7
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH---HHhcc-------cC-
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 642 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~~~~-------l~- 642 (918)
++++|+||||+..... +...+-+ ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976210 0000000 014689999999999997 69999999999988874 67766 22
Q ss_pred ceEEeeCceEEE
Q 002468 643 LWLAAENGMFLR 654 (918)
Q Consensus 643 l~liaenGa~i~ 654 (918)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 378899999875
No 141
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.16 E-value=9.7e-06 Score=81.19 Aligned_cols=38 Identities=26% Similarity=0.115 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+|..++++++++++ .+++.++++|| +.||.+|++.++.
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 58889999999988 57899999999 9999999998854
No 142
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.07 E-value=8.9e-06 Score=83.86 Aligned_cols=37 Identities=24% Similarity=0.106 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|..++++++++++ .+++++++||| +.||.+|++.++.
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 6788999999988 57899999999 9999999999965
No 143
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.92 E-value=1.9e-05 Score=76.20 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=41.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhH
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 634 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 634 (918)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTY 54 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhh
Confidence 6899999999987522110 114578999999999976 6999999999998654
No 144
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.91 E-value=0.0068 Score=68.96 Aligned_cols=221 Identities=20% Similarity=0.239 Sum_probs=142.8
Q ss_pred ChHHHHHHHH-hCCEEeEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHH
Q 002468 258 SRSDLLRAVL-AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 336 (918)
Q Consensus 258 ~~~~ll~~ll-~aDlIgf~t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~ 336 (918)
.++.+.+.|+ ..|+|.-|+..+.+.|.+ ||... +..-| ..|.. |.+ .++.......
T Consensus 166 k~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~----v~v~G-NlKfd-----~~~--------~~~~~~~~~~ 222 (419)
T COG1519 166 KLKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP----VVVTG-NLKFD-----IEP--------PPQLAAELAA 222 (419)
T ss_pred HHHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc----eEEec-ceeec-----CCC--------ChhhHHHHHH
Confidence 3456777776 569999999999999975 55431 11111 01111 111 1233455667
Q ss_pred HHHHhcC-CeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccC
Q 002468 337 LQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 415 (918)
Q Consensus 337 lr~~~~~-~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g 415 (918)
+|.++++ +++++..+. ...--...+.++..+++++|+. .|| ++ | .-||. -..+++++.+.|-+++
T Consensus 223 ~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~----llI-lV-P---RHpER---f~~v~~l~~~~gl~~~ 288 (419)
T COG1519 223 LRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNL----LLI-LV-P---RHPER---FKAVENLLKRKGLSVT 288 (419)
T ss_pred HHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCc----eEE-Ee-c---CChhh---HHHHHHHHHHcCCeEE
Confidence 8888877 899999888 3333444788999999999975 233 32 3 23432 3567778877775554
Q ss_pred CCC-------cccEEEeCCCCCHHHHHHHHHHccEEEECCC---CccCChhHHHHHHhcCCCCceEEEe----CCCCchh
Q 002468 416 TLT-------AVPIHHLDRSLDFPALCALYAVTDVALVTSL---RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQ 481 (918)
Q Consensus 416 ~~~-------~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl---~EG~nLv~lEamA~~~~~~g~lIlS----e~aG~~~ 481 (918)
.-. -++|... . +.-||..+|+.|||+.+--. .-|.| ++|+.+|+ .|+|.- .|.-+++
T Consensus 289 ~rS~~~~~~~~tdV~l~--D-tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~ 359 (419)
T COG1519 289 RRSQGDPPFSDTDVLLG--D-TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAE 359 (419)
T ss_pred eecCCCCCCCCCcEEEE--e-cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHH
Confidence 211 1234322 1 56899999999999988543 35666 68999993 566643 4555555
Q ss_pred hc-c-CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 002468 482 SL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 527 (918)
Q Consensus 482 ~l-g-~~allVnP~D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 527 (918)
.| . .+++.|+. .+.++.++..++.. +++|.++.++....+..+
T Consensus 360 ~l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 360 RLLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 55 2 35677764 77888888877776 678888888888888654
No 145
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.81 E-value=6.6e-06 Score=92.10 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 747 gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+-.|+.++++++++++ ++++.+++||| +.||.+|++.++.
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999998 67899999999 9999999999853
No 146
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.68 E-value=8.4e-05 Score=80.92 Aligned_cols=72 Identities=15% Similarity=0.284 Sum_probs=57.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc----e
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----W 644 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l----~ 644 (918)
...++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+++...+...++.+++ .
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFd 190 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFD 190 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccC
Confidence 3468999999999998721 2234 5999999999997 6999999999999999888888754 3
Q ss_pred EEeeCceEEE
Q 002468 645 LAAENGMFLR 654 (918)
Q Consensus 645 liaenGa~i~ 654 (918)
.|..+|...+
T Consensus 191 vIIs~Gdv~~ 200 (301)
T TIGR01684 191 IIISGGHKAE 200 (301)
T ss_pred EEEECCcccc
Confidence 6777777655
No 147
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.67 E-value=0.00029 Score=74.39 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=38.4
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 743 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 743 I~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..-.+-.|..+++.+++.+| ++++.++++|| +.||.+||+.+..
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 138 PICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 33445589999999999998 67899999999 9999999999976
No 148
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.50 E-value=0.00036 Score=75.57 Aligned_cols=64 Identities=5% Similarity=0.178 Sum_probs=50.9
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHHhcccCc-----e
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 644 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~l~l-----~ 644 (918)
++|+||+||||+.. ...+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~--------------~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKG--------------KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcC--------------CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 68999999999976 2223 478999999997 6999999995 999999888887743 3
Q ss_pred EEeeCceE
Q 002468 645 LAAENGMF 652 (918)
Q Consensus 645 liaenGa~ 652 (918)
++..+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 66777764
No 149
>PLN02954 phosphoserine phosphatase
Probab=97.37 E-value=0.0024 Score=67.49 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHH
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 790 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~ 790 (918)
.+-.|..+++++++.++ .+.+++||| +.+|..|-+.
T Consensus 152 ~~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred CCccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 34568999999998876 357999999 9999998444
No 150
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.27 E-value=0.00085 Score=68.34 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=42.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcc
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 640 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 640 (918)
.|+++||+||||++..-. -++.-++....+-+-...|+.|.+ .|..++|+|+.+...++..++.
T Consensus 7 i~~~v~d~dGv~tdg~~~----~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~ 70 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIV----INDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEE 70 (169)
T ss_pred CeEEEEeCceeeECCeEE----EcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHH
Confidence 689999999999986100 000001233455566677778876 5888888888887777666554
No 151
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.25 E-value=0.0006 Score=74.44 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=54.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc----eE
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 645 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l----~l 645 (918)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 458999999999998721 1223 5899999999997 6999999998888888888887754 25
Q ss_pred EeeCceEEE
Q 002468 646 AAENGMFLR 654 (918)
Q Consensus 646 iaenGa~i~ 654 (918)
|..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 666666544
No 152
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.89 E-value=0.0011 Score=64.20 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=47.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC--------hhhHHHHhcccCc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 643 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~--------~~~L~~~~~~l~l 643 (918)
|+|+||+||||++.... .+ +.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 68999999999963110 00 01235678999999999986 589999999998 6677777776554
No 153
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.88 E-value=0.0079 Score=63.30 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.|+..+++++++++ .+++.+++||| +.+|.+|.+.++.
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~ 189 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGL 189 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCC
Confidence 48999999999987 57889999999 9999999999965
No 154
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.57 E-value=0.1 Score=57.81 Aligned_cols=169 Identities=14% Similarity=0.199 Sum_probs=112.1
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhC-cCcc--CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN-SDWR--GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 419 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~-P~~~--~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 419 (918)
...++++--.+.+-..+--+|.|+..+-+.. -+-+ -+++. +|+ |.||..+.+.++|++. .|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llc-iIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLC-IIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEE-EEc----CCCchhHHHHHHHHHh-----------cc
Confidence 4567888889999999999999998653211 1111 12223 333 3467666666666554 45
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEE--CCCCccCChh--HHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCC
Q 002468 420 VPIHHLDRSLDFPALCALYAVTDVALV--TSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPW 493 (918)
Q Consensus 420 ~pV~~~~g~v~~~el~aly~~ADv~vv--~Sl~EG~nLv--~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~ 493 (918)
..|.+.+-.+.-++++.++..||..|. ||. -|+-|+ +....-| +.|+++-.|.-..|.+ |+||++++
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlvF~-- 390 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLVFE-- 390 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceEec--
Confidence 677777888999999999999996654 553 455444 4566667 3567777787776666 88999996
Q ss_pred CHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 002468 494 NITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVS 538 (918)
Q Consensus 494 D~~~lA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 538 (918)
|.+++|+.|..+++. +..+-. +.++.+.+..-.+|.+....
T Consensus 391 Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 391 DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWER 434 (444)
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHH
Confidence 899999999999983 223332 22333333345678776544
No 155
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.51 E-value=0.0042 Score=60.21 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=43.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHHhcc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 640 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~~~ 640 (918)
|+|++|+||||++.....- ....+- ....+-+.+.+.|+.|.+ .|..++|+|++ +.......++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998721100 000000 000357899999999986 68999999999 67666565543
No 156
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.47 E-value=0.0022 Score=69.81 Aligned_cols=53 Identities=8% Similarity=0.088 Sum_probs=40.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
|+|+||+||||..... + ...+.|.+.++|++|.+ .|..|+++|||+....+..
T Consensus 2 k~i~~D~DGtl~~~~~-~----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~ 54 (257)
T TIGR01458 2 KGVLLDISGVLYISDA-K----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDL 54 (257)
T ss_pred CEEEEeCCCeEEeCCC-c----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHH
Confidence 6899999999997621 0 11267799999999997 6999999999877654333
No 157
>PRK10444 UMP phosphatase; Provisional
Probab=96.36 E-value=0.003 Score=68.46 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=44.8
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
++|+||+||||... . .+.|.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 2 ~~v~~DlDGtL~~~--------------~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHD--------------N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeC--------------C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999976 2 467899999999997 69999999999987776666655
No 158
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.31 E-value=0.013 Score=61.57 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
-|...+.+++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 139 p~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 139 PDPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CCcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 46788999999988 56799999999 9999999888753
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=96.15 E-value=0.0042 Score=69.54 Aligned_cols=55 Identities=11% Similarity=0.196 Sum_probs=43.2
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+.++|+||+||||... . .+-+...++|++|.+ .|..++++|+|+.......+..+
T Consensus 27 ~~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKG--------------D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeC--------------C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHH
Confidence 4689999999999975 1 245788999999997 69999999999965555555443
No 160
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.10 E-value=0.013 Score=63.05 Aligned_cols=83 Identities=8% Similarity=0.009 Sum_probs=53.8
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCC--CCC---CCcccc---------------cccccCChhHHHHHHHhhcC
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDT--PGR---RGDQIR---------------EMELKLHPDLKQPLNALCHD 618 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~--p~~---~~~~~~---------------~~~~~~~~~~~~~L~~L~~d 618 (918)
.+++|.+.....+.-.|+||+||||++..+. -+. ...++. .....+-+...+.|..|.+
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~- 128 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR- 128 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH-
Confidence 5777888777666669999999999987541 000 000000 0112334448999999987
Q ss_pred CCCcEEEEcCC----ChhhHHHHhcccC
Q 002468 619 PKTTIVVLSGS----DRNVLDKNFQEYN 642 (918)
Q Consensus 619 ~g~~V~IvSGR----~~~~L~~~~~~l~ 642 (918)
.|.+++|||+| ....++.+++.++
T Consensus 129 ~G~~i~iVTnr~~~k~~~~a~~ll~~lG 156 (237)
T TIGR01672 129 RGDAIFFVTGRTPGKTDTVSKTLAKNFH 156 (237)
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHHhC
Confidence 69999999999 4445555555443
No 161
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.10 E-value=0.0049 Score=67.88 Aligned_cols=50 Identities=12% Similarity=0.189 Sum_probs=38.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
.++|+||+||||... . .+-+.+.++|++|.+ .|..++++|||+......+
T Consensus 2 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~ 51 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG--------------E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEY 51 (279)
T ss_pred ccEEEEeCCCceEcC--------------C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHH
Confidence 478999999999875 1 234569999999997 6899999999875444443
No 162
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.07 E-value=0.047 Score=59.95 Aligned_cols=40 Identities=13% Similarity=-0.071 Sum_probs=33.5
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.+-.+...++.+++.++ ++++.+++||| ..+|+.|-+.++
T Consensus 155 ~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aG 194 (272)
T PRK13223 155 QKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAG 194 (272)
T ss_pred CCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCC
Confidence 34456778999999988 56899999999 999999988774
No 163
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.02 E-value=0.69 Score=53.12 Aligned_cols=234 Identities=20% Similarity=0.232 Sum_probs=124.5
Q ss_pred CCCCEEEEeCCccc--hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 288 (918)
Q Consensus 211 ~~~DiIwvHDyhL~--llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~ 288 (918)
++.|+|..=||.-+ .+.+.+|++++..||.++. +|.+|.==++|-..++.....=+..|- +-..|..
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~ifP---FE~~~y~--- 149 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIFP---FEPEFYK--- 149 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECCc---ccHHHHh---
Confidence 35788888888754 5788899999888888754 344544334554444443222122221 1112221
Q ss_pred HHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCeEEE--EEecccccCCH-HHHH
Q 002468 289 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVML--GVDRLDMIKGI-PQKL 363 (918)
Q Consensus 289 r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl--~VdRLd~~KGi-~~~L 363 (918)
-.|++ +.|=|+ | =+|.-... .. . ...++.+ .++++|. -=.|-...+-+ +..+
T Consensus 150 -~~g~~-----~~~VGH-------P-l~d~~~~~-----~~-~---~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 150 -KHGVP-----VTYVGH-------P-LLDEVKPE-----PD-R---AEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred -ccCCC-----eEEECC-------c-chhhhccC-----CC-H---HHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 00110 112221 1 12221111 01 0 1122222 3444432 35676665554 8889
Q ss_pred HHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002468 364 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 443 (918)
Q Consensus 364 ~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 443 (918)
+|++.+.+++|+++ +++...+. . ..+.++++....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999864 55333221 1 122233333322211 123222 2456778999999
Q ss_pred EEECCCCccCChhHHHHHHhcCCCCceEEEeC-----------------CCCchhhc-cCCe---EEECCCCHHHHHHHH
Q 002468 444 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQSL-GAGA---ILVNPWNITEVANAI 502 (918)
Q Consensus 444 ~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-----------------~aG~~~~l-g~~a---llVnP~D~~~lA~ai 502 (918)
.+++| |.+.+|++..+ .|.|+.= +.|..-.+ |... ++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 89999999985 5655543 33333333 1111 222345889999999
Q ss_pred HHHhcCCH
Q 002468 503 ARALNMSP 510 (918)
Q Consensus 503 ~~aL~m~~ 510 (918)
..+|.++.
T Consensus 335 ~~ll~~~~ 342 (373)
T PF02684_consen 335 LELLENPE 342 (373)
T ss_pred HHHhcCHH
Confidence 99998764
No 164
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.78 E-value=0.043 Score=59.33 Aligned_cols=94 Identities=22% Similarity=0.333 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEeCCccchHHHHHHhhCC------CCeEEEEEcCC-CCC---hhhhh--cCCCh
Q 002468 192 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FPS---SEIHR--TLPSR 259 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~lr~~~~------~~~I~~flH~P-fPs---~e~fr--~lP~~ 259 (918)
-.-|.-.++.-++.+..+-...||||+||||..++|.+||.... ++++.+++|.. |.. .+.+. .+|+.
T Consensus 113 ~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~ 192 (245)
T PF08323_consen 113 AERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDE 192 (245)
T ss_dssp HHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGG
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHH
Confidence 33443334444343333212579999999999999999998753 69999999974 221 12221 22321
Q ss_pred --------------HHHHHHHHhCCEEeEeCHHHHHHHHH
Q 002468 260 --------------SDLLRAVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 260 --------------~~ll~~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
..+-.|+..||.|..-++.|++..++
T Consensus 193 ~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 193 YFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24556799999999999999876543
No 165
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.74 E-value=0.014 Score=59.21 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=37.7
Q ss_pred CCeEEEEecCcccCCCCC-CCCCCCcccccccc-cCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 002468 571 NNRLLILGFNATLTEPVD-TPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~-~p~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 631 (918)
+.|+++||+||||+.... .+ . .+.+ .+- .+-|.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~--~-~~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV--F-PTSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc--c-cCCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 458899999999997421 00 0 0000 111 245889999999986 6999999996554
No 166
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.57 E-value=0.043 Score=54.96 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=58.6
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCce
Q 002468 565 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 644 (918)
Q Consensus 565 ~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~ 644 (918)
+..++...|-|++|+|-||++. .....+|++++-+.++.. .|..|+|+|--+..-+..+...+++.
T Consensus 21 ~~L~~~Gikgvi~DlDNTLv~w-------------d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 21 DILKAHGIKGVILDLDNTLVPW-------------DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred HHHHHcCCcEEEEeccCceecc-------------cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 3455678899999999999998 245678999999999997 69999999999999999888888776
Q ss_pred EEe
Q 002468 645 LAA 647 (918)
Q Consensus 645 lia 647 (918)
+|.
T Consensus 87 fi~ 89 (175)
T COG2179 87 FIY 89 (175)
T ss_pred eee
Confidence 654
No 167
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.43 E-value=0.026 Score=55.85 Aligned_cols=69 Identities=19% Similarity=0.361 Sum_probs=44.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.||+++|.||||++-.-.-..-+..++ ..+-.---.|+.|.+ .|.+|+|+|||.-.-++...+.+++
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~K----aFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIK----AFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceee----eeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 46799999999999984210000011222 112222234556665 5999999999999999998887654
No 168
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.41 E-value=0.049 Score=55.44 Aligned_cols=61 Identities=13% Similarity=0.173 Sum_probs=46.9
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHHhcccCc
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 643 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~~~~l~l 643 (918)
.-..+++++|+||||+... ...+.+.+.+.|+.|.+ .+..++|+|+.+ ...+..++..+++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HCCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3567999999999999762 33577899999999986 589999999998 4555555554443
No 169
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.36 E-value=0.023 Score=56.25 Aligned_cols=53 Identities=19% Similarity=0.232 Sum_probs=38.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 630 (918)
++++||+||||++..... ..... ....+-|.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~~--~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRSL--DDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCCH--HHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999873200 00001 234578899999999997 699999999876
No 170
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.27 E-value=0.017 Score=58.97 Aligned_cols=52 Identities=10% Similarity=0.124 Sum_probs=38.9
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 631 (918)
|++|||.||||+...+.. +. ..+..+.|.+.++|++|.+ .|..++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~~--~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----HE--IDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----CC--HHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999532211 00 0345677899999999997 6899999997754
No 171
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=94.91 E-value=3.2 Score=46.78 Aligned_cols=168 Identities=18% Similarity=0.197 Sum_probs=104.5
Q ss_pred EEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEc
Q 002468 308 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 387 (918)
Q Consensus 308 ~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~ 387 (918)
.+-.+|.-+|+..-..... ....++..|+-=-.-|++-++...|+++.+.... ++.++.
T Consensus 161 ~~lyfPt~m~~~~~~~~~~------------~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~~------~~kIiv--- 219 (360)
T PF07429_consen 161 SLLYFPTRMDPALTLSEKN------------KKNKGKLTILVGNSGDPSNNHIEALEALKQQFGD------DVKIIV--- 219 (360)
T ss_pred eEEEcCCCCchhhhccccc------------cCCCCceEEEEcCCCCCCccHHHHHHHHHHhcCC------CeEEEE---
Confidence 4667788777653221100 0112344455445668888888888877654321 233331
Q ss_pred CCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-ccCChhHHHHHHhcCC
Q 002468 388 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDL 466 (918)
Q Consensus 388 psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~-EG~nLv~lEamA~~~~ 466 (918)
|- +.+..++++.++|.+.+.++ ||.. .+..++..++.+|+.++++.||++++...| .|||..++ .+.+
T Consensus 220 PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~--- 288 (360)
T PF07429_consen 220 PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL--- 288 (360)
T ss_pred EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc---
Confidence 11 12222455677777766654 4432 244568899999999999999999999985 89998765 3444
Q ss_pred CCceEEEeCCCCchhhccCCeEEE----CCCCHHHHHHHHHHHhcC
Q 002468 467 KKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALNM 508 (918)
Q Consensus 467 ~~g~lIlSe~aG~~~~lg~~allV----nP~D~~~lA~ai~~aL~m 508 (918)
|.++++|+-.-....+-+.++.| +.-|...+++|=+++...
T Consensus 289 -G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 289 -GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV 333 (360)
T ss_pred -CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence 47999999888888773334333 455666666665555543
No 172
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.81 E-value=0.067 Score=57.52 Aligned_cols=70 Identities=10% Similarity=0.004 Sum_probs=46.7
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcc---------c------------ccccccCChhHHHHHHHhhc
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ---------I------------REMELKLHPDLKQPLNALCH 617 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~---------~------------~~~~~~~~~~~~~~L~~L~~ 617 (918)
.++++.+.....+...|.||+|||+++..+..-. +.+ + ......+-+.+++.|+.|.+
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~ 128 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK 128 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH
Confidence 5666776665444558999999999974321100 000 0 01234466679999999986
Q ss_pred CCCCcEEEEcCCC
Q 002468 618 DPKTTIVVLSGSD 630 (918)
Q Consensus 618 d~g~~V~IvSGR~ 630 (918)
.|..++++|||+
T Consensus 129 -~G~~I~iVTnR~ 140 (237)
T PRK11009 129 -RGDSIYFITGRT 140 (237)
T ss_pred -CCCeEEEEeCCC
Confidence 699999999996
No 173
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=94.79 E-value=0.077 Score=52.39 Aligned_cols=92 Identities=16% Similarity=0.249 Sum_probs=47.8
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChH-----HHHHH-HHhCCEEeEeCHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS-----DLLRA-VLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~-----~ll~~-ll~aDlIgf~t~~~~~~Fl~ 285 (918)
+.|+||+|.++...+..+... +.++.+++|.+++.........+.. .+... .-.+|.|..-+....+.+.
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~- 155 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELI- 155 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHH-
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHH-
Confidence 579999999888765544333 8899999999874211111111111 11112 2357888877765555443
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhh
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 322 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~ 322 (918)
+ +|. ...++.++|+|||++.|+
T Consensus 156 ---~-~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 156 ---K-FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ---H-HT-------------SS-EEE----B-CCCH-
T ss_pred ---H-hCC-----------cccCCEEEECCccHHHcC
Confidence 2 332 246899999999999884
No 174
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.78 E-value=0.19 Score=53.32 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
-..+..+++.++ .+++.++++|| ..+|..|=+.++
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 356667888887 34579999999 999999998886
No 175
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=94.74 E-value=0.0018 Score=79.25 Aligned_cols=220 Identities=15% Similarity=0.102 Sum_probs=129.7
Q ss_pred CCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh--
Q 002468 556 PSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV-- 633 (918)
Q Consensus 556 ~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~-- 633 (918)
..++..++......-+.-|.++|+||||-.+..+| ..+.++..++.+-.+..+ ...-.++|||.+..
T Consensus 173 spfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v 241 (732)
T KOG1050|consen 173 SPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSV 241 (732)
T ss_pred CCCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeee
Confidence 34566777777777777789999999999998887 355566666666666554 33455699998665
Q ss_pred --------HHHHhcccCceEEeeCceEEEec--CCeeeeeccccC-----ChHHHHHHHHHHHHHHhc------------
Q 002468 634 --------LDKNFQEYNLWLAAENGMFLRCT--TGKWMTTMPEHL-----NMEWVDSLKHVFEYFTER------------ 686 (918)
Q Consensus 634 --------L~~~~~~l~l~liaenGa~i~~~--~~~w~~~~~~~~-----~~~w~~~v~~il~~~~~~------------ 686 (918)
..++.+..+++.+++||..++.. ++...-.. +.+ ...+.....+.++.|-+-
T Consensus 242 ~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgv-D~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~ 320 (732)
T KOG1050|consen 242 KALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGV-DRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENP 320 (732)
T ss_pred eecccccchHHhhccccchhHHHHHHHHhhhccCCceEecc-cccccccCchHHHHHHHHHHHhChhhhceEEEEEEecC
Confidence 66777777889999999999842 22111001 111 112334444444444321
Q ss_pred --CCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhC
Q 002468 687 --TPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIV 762 (918)
Q Consensus 687 --~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~l~v~~G~~~vEI~p-~gvnKG~ai~~Ll~~l~ 762 (918)
++|.-+++-..++..||+..+..++...+. .+ ..+... ...+...+..+.|+++ ..+.||.++..+...++
T Consensus 321 ~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~----pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~ 395 (732)
T KOG1050|consen 321 KRTDGKEVEELKFCVSVHVRRINEKFGSASYQ----PV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILC 395 (732)
T ss_pred CcccchHHHHHHHHhHhhhhhhhhccCCcccc----eE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHh
Confidence 112112222334444555443333321100 00 000010 1223445667899998 68999999998877766
Q ss_pred cCCCCCCCCceEEEEecCCCCcHHHHHHcCcC
Q 002468 763 HSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPE 794 (918)
Q Consensus 763 ~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~~ 794 (918)
... ...+.=...++|| +.+|++.+..++.+
T Consensus 396 ~~~-~~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 396 QEN-KKSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred hcc-cCCceEEeeeccc-cccccccCEEECCc
Confidence 322 0012223489999 99999999999887
No 176
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.58 E-value=2.1 Score=48.84 Aligned_cols=250 Identities=15% Similarity=0.121 Sum_probs=126.6
Q ss_pred CCCCEEEEeCCccc--hHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 288 (918)
Q Consensus 211 ~~~DiIwvHDyhL~--llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~ 288 (918)
++.|++..=|+.=+ .+...+|+.+|+.||.++. ++.+|.==|.|...+.. .+|++.---+-. ..|.+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~D~lLailPFE-~~~y~--- 152 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YVDHLLAILPFE-PAFYD--- 152 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--HhhHeeeecCCC-HHHHH---
Confidence 46788887776643 6788999999999999865 23333322333222221 234433211111 11111
Q ss_pred HHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh----cCCeEEEEEe-c-ccccCCHHHH
Q 002468 289 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVD-R-LDMIKGIPQK 362 (918)
Q Consensus 289 r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vIl~Vd-R-Ld~~KGi~~~ 362 (918)
+ .|.+ .+|=|+ .=.|.-.+.+. .+..|+++ ..+.+.+--| | =+-..-++-.
T Consensus 153 k-~g~~-----~~yVGH--------pl~d~i~~~~~---------r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 153 K-FGLP-----CTYVGH--------PLADEIPLLPD---------REAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred h-cCCC-----eEEeCC--------hhhhhcccccc---------HHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 0 1111 112121 11222112111 12245555 2333333332 3 3334456777
Q ss_pred HHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002468 363 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 442 (918)
Q Consensus 363 L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 442 (918)
++|++.+.+++|+++ ++.-.. -+.|+.+..+.. ..- .. .+.. .+...+....+.+||
T Consensus 210 ~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~~~---~~~----~~---~~~~----~~~~~~~~~a~~~aD 266 (381)
T COG0763 210 VQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEEAL---KWE----VA---GLSL----ILIDGEKRKAFAAAD 266 (381)
T ss_pred HHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHHHh---hcc----cc---CceE----EecCchHHHHHHHhh
Confidence 889999998999975 332221 133333332221 110 00 0111 123456677899999
Q ss_pred EEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh-cc---------------CCeEEECC------CCHHHHHH
Q 002468 443 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LG---------------AGAILVNP------WNITEVAN 500 (918)
Q Consensus 443 v~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~-lg---------------~~allVnP------~D~~~lA~ 500 (918)
+.+..| |.+.+|++.|+ .|.|++=-...-.. +. -+-.+| | .-++.+|.
T Consensus 267 ~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~iv-PEliq~~~~pe~la~ 336 (381)
T COG0763 267 AALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIV-PELIQEDCTPENLAR 336 (381)
T ss_pred HHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccc-hHHHhhhcCHHHHHH
Confidence 999999 89999999995 67777644333222 10 111111 2 24788999
Q ss_pred HHHHHhcCCH--HHHHHHHHHHHHHHHhc
Q 002468 501 AIARALNMSP--EEREKRHWHNFTHVTTH 527 (918)
Q Consensus 501 ai~~aL~m~~--~er~~r~~~~~~~v~~~ 527 (918)
++..++.++. ++.++....++..+.+.
T Consensus 337 ~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 337 ALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred HHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 9999998762 12223334455555444
No 177
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=94.28 E-value=0.14 Score=54.15 Aligned_cols=38 Identities=3% Similarity=-0.258 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
-+...++.+++.++ .+++.+++||| ..+|.++-+.++-
T Consensus 149 p~~~~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~ 186 (222)
T PRK10826 149 PHPEVYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARM 186 (222)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCC
Confidence 45568999999998 57899999999 9999999988854
No 178
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=94.28 E-value=1.6 Score=51.47 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=91.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
+..++.+..++ .|=-+..+..+.++|+.-|+-+ |++...|. .+. +.++ +.+.+ .|.. -..|
T Consensus 284 d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~--~~l~----~~~~~----~Gv~-~~Ri 344 (468)
T PF13844_consen 284 DAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE--ARLR----RRFAA----HGVD-PDRI 344 (468)
T ss_dssp SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH--HHHH----HHHHH----TTS--GGGE
T ss_pred CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH--HHHH----HHHHH----cCCC-hhhE
Confidence 45455556665 4667899999999999999853 55555442 121 2233 33332 2332 2346
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCC-chh-----hc---cCCeEEECCC
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ-----SL---GAGAILVNPW 493 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG-~~~-----~l---g~~allVnP~ 493 (918)
.| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+ |++|+|--+- .+. .| |-.-++ ..
T Consensus 345 ~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-----GVPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A~ 415 (468)
T PF13844_consen 345 IF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-----GVPVVTLPGETMASRVGASILRALGLPELI--AD 415 (468)
T ss_dssp EE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH-----T--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred EE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc-----CCCEEeccCCCchhHHHHHHHHHcCCchhc--CC
Confidence 64 567788999999999999999987766 5678999999 6777763321 111 11 322222 24
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHh
Q 002468 494 NITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDT 543 (918)
Q Consensus 494 D~~~lA~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~ 543 (918)
|.++..+.-.++-+++ +.++...+++++...+ ++...|+++|...+...
T Consensus 416 s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 416 SEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 5666665555555543 4555555555555532 57778888777666543
No 179
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.19 E-value=0.063 Score=54.26 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=38.3
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
+++|||.||||......+ ...+.+ ....+-|.+.++|++|.+ .|..++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 689999999999853211 111111 234677899999999997 68999999975
No 180
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=94.04 E-value=11 Score=42.95 Aligned_cols=243 Identities=16% Similarity=0.141 Sum_probs=120.6
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHH--hCCEEeEeCHHHHHHHHHHHHH
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 289 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~r 289 (918)
.+|+|.||.=-.-.++..+-....++||++ +|---=+.|.. .|.-++..|.+. -||+----|..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 458999987555555555555566888775 33221111221 133455555442 467766677777776654
Q ss_pred HhccccCCCceeeCCeeeEEEEe-eCCcChhhhhhhhcCCchHHHHHHHHHHhcCCeEEE-EEeccccc---CCHHHHHH
Q 002468 290 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVML-GVDRLDMI---KGIPQKLL 364 (918)
Q Consensus 290 ~lg~~~~~~~i~~~g~~~~v~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl-~VdRLd~~---KGi~~~L~ 364 (918)
.|.+ ..+|.++ ..++|.-........+... ...+-.. ..++++| ..=|.... ......+.
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~ 204 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQD-APKPYILVTLHPVTNEDNPERLEQILE 204 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHH
Confidence 2321 1233332 3456654222211111110 1122112 3444444 44343332 34567777
Q ss_pred HHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002468 365 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 444 (918)
Q Consensus 365 Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 444 (918)
+++.+.+. ++ +.+|....++ | .....+.+...+++ .++ +..+++..++..|++.|+++
T Consensus 205 ~l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~-~~~~l~~~~~l~ll~~a~~v 262 (346)
T PF02350_consen 205 ALKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVR-LIEPLGYEEYLSLLKNADLV 262 (346)
T ss_dssp HHHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEE-EE----HHHHHHHHHHESEE
T ss_pred HHHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEE-EECCCCHHHHHHHHhcceEE
Confidence 77777766 44 3344333211 1 22333333333221 254 45789999999999999999
Q ss_pred EECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcC
Q 002468 445 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 508 (918)
Q Consensus 445 vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA~ai~~aL~m 508 (918)
|-.|- | +..||.+++ .|+|.=...|-.++. -...++|. .|.+++.++|.+++..
T Consensus 263 vgdSs--G---I~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 263 VGDSS--G---IQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EESSH--H---HHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EEcCc--c---HHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 88872 2 234999984 677777777777765 12445565 8999999999999975
No 181
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.97 E-value=0.051 Score=50.53 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=38.4
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCCh---hhHHHHhcccCce
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYNLW 644 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~~~~l~l~ 644 (918)
|+||+||||... ..+-|...++|++|.+ .|..++++|-.+. ..+.+.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999974 2456788999999997 5889999886654 4455555544443
No 182
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.96 E-value=0.052 Score=54.77 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=33.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
|+.+||+||||+.... +..-.+-+.+-.-.++.+.++|++|.+ .|..|+|+|--
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeCc
Confidence 6899999999996521 000000011123356789999999987 69999999843
No 183
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.87 E-value=0.14 Score=51.99 Aligned_cols=65 Identities=20% Similarity=0.233 Sum_probs=48.7
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCC-cEEEEcCCC-------hhhHHHHh
Q 002468 567 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 638 (918)
Q Consensus 567 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~-------~~~L~~~~ 638 (918)
.++...|.|+||.|.||++. ....++++..+.++++.+.-+. .|+|+|-.. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 56788999999999999987 3567899999999999974332 599999873 44555544
Q ss_pred cccCce
Q 002468 639 QEYNLW 644 (918)
Q Consensus 639 ~~l~l~ 644 (918)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444543
No 184
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.80 E-value=0.092 Score=53.77 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=39.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 630 (918)
.|+++||.||||.-... + ..... ....+-|.+.++|++|.+ .|..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~-~--~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G--YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCc-c--ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 58999999999865531 1 11222 234577899999999997 589999999876
No 185
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.64 E-value=0.12 Score=57.34 Aligned_cols=68 Identities=18% Similarity=0.150 Sum_probs=49.2
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+.+++++|+||||......- ..+-....+..+.+.+.+.|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS--PYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC--ccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 45789999999999864210 0000000234678999999999987 59999999999998887766654
No 186
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=93.58 E-value=6.1 Score=45.32 Aligned_cols=73 Identities=19% Similarity=0.093 Sum_probs=51.9
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 499 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l--g~~allVnP~D~~~lA 499 (918)
|. +.+.++..++.+|++.||++|-.|. |. ..||.+.+ .|+|. ...=.+.+ |.+.++| +.|.+++.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----gg-i~EA~~lg----~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----SG-IIEAPSFG----VPTIN--IGTRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----hH-HHhhhhcC----CCEEe--ecCCchhhhhcCeEEEe-CCCHHHHH
Confidence 44 6789999999999999999995552 12 28999984 45542 22222223 5566768 77899999
Q ss_pred HHHHHHhc
Q 002468 500 NAIARALN 507 (918)
Q Consensus 500 ~ai~~aL~ 507 (918)
+++.+++.
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
No 187
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.51 E-value=0.11 Score=59.02 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=40.5
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
+++++|||.||||....... ...+.. ....+-|.+.+.|..|.+ .|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863211 011111 346788999999999976 68999999984
No 188
>PTZ00445 p36-lilke protein; Provisional
Probab=93.34 E-value=0.22 Score=52.21 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=49.7
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCC----CCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 632 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~----~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 632 (918)
..+.+++.+++...|+|++|+|-||++.. .+|. .........++|+.+..+.+|.+ .+..|+|||=.+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchh
Confidence 35567788889999999999999999821 1110 00000123478999999999886 69999999966543
No 189
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.33 E-value=0.22 Score=50.81 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=30.6
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 606 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 606 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+++.+.|+.+.+ .+..|+|+||-+...++..+..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 667799999876 5999999999999888888776544
No 190
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.33 E-value=0.12 Score=55.62 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=42.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--HHhcccC
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 642 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~--~~~~~l~ 642 (918)
+.++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 3578999999999875 2457899999999997 59999998876654433 5555543
No 191
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=93.02 E-value=0.2 Score=48.55 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=44.2
Q ss_pred CCCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHH----H-HHHHhCCEEeEeCHHHHHHHHH
Q 002468 211 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL----L-RAVLAADLVGFHTYDYARHFVS 285 (918)
Q Consensus 211 ~~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~l----l-~~ll~aDlIgf~t~~~~~~Fl~ 285 (918)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++...+ . ..+-.||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 37999999997543221 1222222 2 3345789999999877776653
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeeCC
Q 002468 286 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 315 (918)
Q Consensus 286 ~~~r~lg~~~~~~~i~~~g~~~~v~v~P~G 315 (918)
.|. ...+|.++|+|
T Consensus 147 -----~g~-----------~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YGV-----------PPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hCC-----------CCCcEEEeCcC
Confidence 222 34578899987
No 192
>PRK14986 glycogen phosphorylase; Provisional
Probab=92.94 E-value=5.7 Score=49.74 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=101.0
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHH--HhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 343 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~-~L~Af~~ll--~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
+..+++.+-|+..-|-... +|..++++. ..+|+.. ..+++|..|-+..++... +.+-+.|..++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMA-KHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhccChhhcC
Confidence 4557788999999998777 777766663 4566521 246777666655555433 4566677777877775322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 491 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVn 491 (918)
...|+|+. ..+-.--..++.+|||-.-+|+ .|.=|..-+=||.- |+|.+|..-|+-.++ +++++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 34587765 4455555678899999999998 47777777777663 899999998877655 46788885
Q ss_pred CCCHHHHHH
Q 002468 492 PWNITEVAN 500 (918)
Q Consensus 492 P~D~~~lA~ 500 (918)
. ..+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 3 5666554
No 193
>PRK06769 hypothetical protein; Validated
Probab=92.92 E-value=0.11 Score=52.96 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=39.3
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 630 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 630 (918)
+..|+|++|-||||.....-. . .....+-|.+.+.|++|.+ .|..++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~----~---~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH----Y---PGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC----C---HHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 357899999999997652100 0 0234567899999999987 589999999864
No 194
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=92.82 E-value=0.63 Score=56.48 Aligned_cols=67 Identities=16% Similarity=0.322 Sum_probs=52.5
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCC-CcEEEEcCCChhhHHHHhcccCc
Q 002468 565 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 565 ~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g-~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+.+.....+.+++..||+++.... ....+-|.+.++|+.|.+ .| ..++|+||.+....+...+.+++
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 445556678899999998876421 234578999999999986 57 89999999999998888877654
No 195
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.79 E-value=0.14 Score=54.95 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.7
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHHhcc
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 640 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~ 640 (918)
++||+||||.+.. .+-+.+.++|+.|.+ .+..++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999861 234588999999986 588899987 9999998877766
No 196
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=92.65 E-value=3.9 Score=47.46 Aligned_cols=141 Identities=16% Similarity=0.208 Sum_probs=80.2
Q ss_pred EEEEEec-ccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcc------cCCCC
Q 002468 346 VMLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR------FGTLT 418 (918)
Q Consensus 346 vIl~VdR-Ld~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~------~g~~~ 418 (918)
+++.-.| =+-.++++.+++|++.+.++ |+ +.++....++ ..+..+++.+.+. .++.. .....
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3445566 44556788999999988655 44 4455444332 2233333333211 11000 00000
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCc------hhh---ccCCeEE
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGAIL 489 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~------~~~---lg~~all 489 (918)
...+.++ ....+...+|+.||++|..| |-+..|+++++ .|.|+--+.+. .+. +-..++.
T Consensus 278 ~~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 278 KGTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred cCceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 0012221 12367889999999999986 46669999995 67777653222 111 1024555
Q ss_pred ECCCCHHHHHHHHHHHhcCC
Q 002468 490 VNPWNITEVANAIARALNMS 509 (918)
Q Consensus 490 VnP~D~~~lA~ai~~aL~m~ 509 (918)
+...+++.++++|.++|+++
T Consensus 346 l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred cCCCCHHHHHHHHHHHHcCH
Confidence 55678899999999999854
No 197
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=92.35 E-value=22 Score=40.73 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=49.4
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCc----hhhcc--CCeEEECCC--CHH
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSLG--AGAILVNPW--NIT 496 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~----~~~lg--~~allVnP~--D~~ 496 (918)
+.++++.. .+|..||++| .+-|+ -+..|+++++ .|+|+--..+- +..+. ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 45677755 4578899999 45565 5679999995 67777655542 22221 235555554 789
Q ss_pred HHHHHHHHHhc
Q 002468 497 EVANAIARALN 507 (918)
Q Consensus 497 ~lA~ai~~aL~ 507 (918)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999998
No 198
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.29 E-value=0.21 Score=59.63 Aligned_cols=67 Identities=9% Similarity=0.203 Sum_probs=46.2
Q ss_pred cCCeEEEEecCcccCCCCC---CCCCCCcccccccc-cCChhHHHHHHHhhcCCCCcEEEEcCCCh------------hh
Q 002468 570 SNNRLLILGFNATLTEPVD---TPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR------------NV 633 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~---~p~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~------------~~ 633 (918)
...|++|||+||||..... .|. -+ .+- .+.|.+.+.|++|.+ .|..++|+|..+- ..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~-----~~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~k 238 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPK-----GP-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAK 238 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCC-----CH-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHH
Confidence 4569999999999996421 110 00 122 257899999999987 6999999998655 23
Q ss_pred HHHHhcccCc
Q 002468 634 LDKNFQEYNL 643 (918)
Q Consensus 634 L~~~~~~l~l 643 (918)
+...+..+++
T Consensus 239 i~~iL~~lgi 248 (526)
T TIGR01663 239 IEAIVAKLGV 248 (526)
T ss_pred HHHHHHHcCC
Confidence 5566666554
No 199
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=92.21 E-value=0.1 Score=52.68 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=35.8
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 744 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 744 ~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
.+.+.+|+.+++.+++..+ ++++.++++|| +.+|.+|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 4667899999999999876 56789999999 99999999864
No 200
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=91.96 E-value=0.25 Score=51.27 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=25.2
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+-|.+.+.|..|.+ . ..++|+||.....++..+..+
T Consensus 69 ~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 69 PLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 45667777777775 3 677778888777777666654
No 201
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.80 E-value=0.34 Score=48.04 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=49.1
Q ss_pred CCeEEEEecCcccCCCCC--CCCCC-Cc-ccc--------cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHh
Q 002468 571 NNRLLILGFNATLTEPVD--TPGRR-GD-QIR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 638 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~--~p~~~-~~-~~~--------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 638 (918)
++.++++|+||||+.... .++.. .. .+. .....+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998642 11111 10 000 1233567899999999974 6899999999999998887
Q ss_pred cccC
Q 002468 639 QEYN 642 (918)
Q Consensus 639 ~~l~ 642 (918)
..++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7653
No 202
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=91.77 E-value=0.33 Score=53.38 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 198 ~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 198 RRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred HHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 357788888887 56789999999 998877766663
No 203
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.76 E-value=0.35 Score=51.68 Aligned_cols=69 Identities=16% Similarity=0.144 Sum_probs=47.1
Q ss_pred CCeEEEEecCcccCCCCCCCCC--CC----c--c----cccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh---HH
Q 002468 571 NNRLLILGFNATLTEPVDTPGR--RG----D--Q----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 635 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~--~~----~--~----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~ 635 (918)
.+-+++||+|-|+++..+.-.. .+ + . +....+..-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4568999999999986311000 00 0 0 112355678899999999987 699999999999765 44
Q ss_pred HHhcc
Q 002468 636 KNFQE 640 (918)
Q Consensus 636 ~~~~~ 640 (918)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55544
No 204
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=91.74 E-value=0.33 Score=49.73 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=48.7
Q ss_pred CeEEEEecCcccCCCCCCC-----CCCCcccc-------cccccCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHHh
Q 002468 572 NRLLILGFNATLTEPVDTP-----GRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 638 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p-----~~~~~~~~-------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~ 638 (918)
.||+.||+|+||.+..-.. -+..++.. .....+-|.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 4799999999999763211 00011111 1234577899999999987 68999999988 787777776
Q ss_pred cccC
Q 002468 639 QEYN 642 (918)
Q Consensus 639 ~~l~ 642 (918)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6544
No 205
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=91.66 E-value=0.45 Score=48.92 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+|+.+++++++.++ .+++.++++|| +.+|.+|++.++.
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 49999999999887 56889999999 9999999999864
No 206
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.63 E-value=0.31 Score=53.34 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=47.7
Q ss_pred cCCeEEEEecCcccCCCCCCC-----CCCC---ccc----ccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--
Q 002468 570 SNNRLLILGFNATLTEPVDTP-----GRRG---DQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 635 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p-----~~~~---~~~----~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~-- 635 (918)
.++..|+||+|+|+++..+.- ...+ ... ......+-|.+.+.|+.|.+ .|..|+|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 456799999999999764210 0000 000 11234567899999999987 59999999999855444
Q ss_pred -HHhcccCc
Q 002468 636 -KNFQEYNL 643 (918)
Q Consensus 636 -~~~~~l~l 643 (918)
.++..+++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
No 207
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.19 E-value=0.33 Score=51.32 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=26.0
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
.+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 74 ~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 456677777777665 57777777777777776666653
No 208
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=91.18 E-value=24 Score=40.41 Aligned_cols=85 Identities=20% Similarity=0.184 Sum_probs=56.4
Q ss_pred HHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCch--hh------c--cCCeEEECCCC--HHHHH
Q 002468 432 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEVA 499 (918)
Q Consensus 432 ~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~--~~------l--g~~allVnP~D--~~~lA 499 (918)
+++.++|+.||+++.=+= ++++.|..|++ .|.|+=-+...+ ++ | -..|+.+.-.+ ++.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999987552 58899999995 666666555542 22 2 12456665554 88999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHH
Q 002468 500 NAIARALNMSPEEREKRHWHNFTHVT 525 (918)
Q Consensus 500 ~ai~~aL~m~~~er~~r~~~~~~~v~ 525 (918)
+.|.+++..+ +..+++..+.+....
T Consensus 316 ~~i~~l~~~~-~~l~~m~~~a~~~~~ 340 (357)
T COG0707 316 ELILRLLSNP-EKLKAMAENAKKLGK 340 (357)
T ss_pred HHHHHHhcCH-HHHHHHHHHHHhcCC
Confidence 9999999863 333333344443333
No 209
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=90.35 E-value=1.3 Score=53.61 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=48.6
Q ss_pred HhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCC-cEEEEcCCChhhHHHHhcccCc
Q 002468 568 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 568 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.....+.+++-.||++..... ....+-+.+.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 338 ~~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 338 ESAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hhCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 334456777788888775421 133577899999999987 688 9999999999999888877654
No 210
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=90.27 E-value=0.41 Score=48.26 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=34.0
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.+.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 73 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 73 ALRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 356889999999886 5899999999999999988887654
No 211
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.98 E-value=0.034 Score=59.56 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=52.9
Q ss_pred cCCeEEEEecCcccCCCCCC------------CCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 570 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
-++..++||+|+|+++..+. |.....-+.......-|.+++.++.+.+ .|..|+++|||+...-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 35678999999999864211 0000000001223445668899999887 6999999999998765555
Q ss_pred hccc-CceEEeeCceEEEe
Q 002468 638 FQEY-NLWLAAENGMFLRC 655 (918)
Q Consensus 638 ~~~l-~l~liaenGa~i~~ 655 (918)
...+ ..|+-.-.+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 5554 33444446666664
No 212
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=89.75 E-value=0.39 Score=52.33 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=44.8
Q ss_pred CCeEEEEecCcccCCCCCCCCC--CC------cccc-----cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHH
Q 002468 571 NNRLLILGFNATLTEPVDTPGR--RG------DQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 637 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~--~~------~~~~-----~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 637 (918)
.+-+++||+|+|+++..+.-.. .+ .... ...+..-|.+++..+.|.+ .|.+|+++|||+-..-..-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 3568999999999964311100 00 0011 1245567899999999986 6999999999986554333
Q ss_pred hcc
Q 002468 638 FQE 640 (918)
Q Consensus 638 ~~~ 640 (918)
...
T Consensus 179 ~~N 181 (275)
T TIGR01680 179 EAN 181 (275)
T ss_pred HHH
Confidence 333
No 213
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=89.74 E-value=0.21 Score=49.58 Aligned_cols=38 Identities=21% Similarity=0.103 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+|-.+.+.|+++++ +.++++.|+|| |.+|.++|+.+.-
T Consensus 83 dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGl 120 (170)
T COG1778 83 DKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGL 120 (170)
T ss_pred hHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCC
Confidence 89999999999998 67899999999 9999999999964
No 214
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=89.34 E-value=0.58 Score=49.15 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhCcCCCCCCC-CceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~-~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+...+.+++++++ .+ ++.+++||| ..+|..+=+.++-
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~aa~~aG~ 184 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEAGINAGA 184 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHHHHHCCC
Confidence 4566777888877 33 688999999 9999877777643
No 215
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=89.20 E-value=14 Score=42.35 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=61.3
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh----c--cCCeEEECC--CCHH
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----L--GAGAILVNP--WNIT 496 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~----l--g~~allVnP--~D~~ 496 (918)
+.+.+++. .++..||++|..+ |.| +..|+++++ .|+|+.-..+--.. + -..|+.++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 45777764 5678999988654 665 679999995 67777544432211 2 123555654 4678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 002468 497 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 536 (918)
Q Consensus 497 ~lA~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~f 536 (918)
+++++|.++|..+ +.+++.+.+.+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 344444555444433 3444554433
No 216
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=89.10 E-value=44 Score=40.80 Aligned_cols=66 Identities=21% Similarity=0.217 Sum_probs=44.4
Q ss_pred HHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe-------------------CCCCchhhc-cCCe--EEE--
Q 002468 435 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGA--ILV-- 490 (918)
Q Consensus 435 ~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS-------------------e~aG~~~~l-g~~a--llV-- 490 (918)
..++++||+++++| |.+.+|++.++ .|.|+. .+.|..-.+ |+.. =++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68899999999999 89999999995 566653 233333333 2221 123
Q ss_pred -CCCCHHHHHHHHHHHhcCCH
Q 002468 491 -NPWNITEVANAIARALNMSP 510 (918)
Q Consensus 491 -nP~D~~~lA~ai~~aL~m~~ 510 (918)
.-.+++.+|+++ +.|.+++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred cccCCHHHHHHHH-HHhcCHH
Confidence 345688999886 7776553
No 217
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=89.06 E-value=0.93 Score=49.50 Aligned_cols=34 Identities=3% Similarity=-0.150 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 752 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 752 ~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
..+..+++.++ .+++.+++||| ..+|..+=+.++
T Consensus 169 e~~~~a~~~l~------~~p~~~l~IgD-s~~Di~aA~~aG 202 (260)
T PLN03243 169 EMFMYAAERLG------FIPERCIVFGN-SNSSVEAAHDGC 202 (260)
T ss_pred HHHHHHHHHhC------CChHHeEEEcC-CHHHHHHHHHcC
Confidence 34456667777 56788999999 888866655553
No 218
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=88.84 E-value=20 Score=40.93 Aligned_cols=195 Identities=13% Similarity=0.164 Sum_probs=101.8
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHh
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 638 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 638 (918)
|..++..--...+-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|.|||.=.+...+++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 444444444444679999999999999832 12234455555555554 49999999988877655444
Q ss_pred ccc-C------------------c-eEEeeCceEEEec-----------CCeeeeeccccCChHHH-HHHHHHHH-----
Q 002468 639 QEY-N------------------L-WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWV-DSLKHVFE----- 681 (918)
Q Consensus 639 ~~l-~------------------l-~liaenGa~i~~~-----------~~~w~~~~~~~~~~~w~-~~v~~il~----- 681 (918)
..+ + + .+-||.-+.++.. ..+|... .-..|. +.+..+++
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 332 1 1 2445555555532 1235321 112353 23444443
Q ss_pred --HHHhc--CCCceeeeccceEEEEeeccChhhhHHHHH----HHHHHHhcCC-C-CCCCeEEEEcCc--EEEEEeCCCC
Q 002468 682 --YFTER--TPRSHFEQRETSLVWNYKYADVEFGRIQAR----DMLQHLWTGP-I-SNASVEVVQGSK--SVEVRAVGVT 749 (918)
Q Consensus 682 --~~~~~--~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~----el~~~L~~~~-~-~~~~l~v~~G~~--~vEI~p~gvn 749 (918)
....+ .| ..|-.|+-++-+--. ........+.+ .+...| +.. . ..-++....|.. +|+| -|
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----Gd 349 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----GD 349 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----CC
Confidence 22222 34 345555544433211 11111112222 233344 221 1 123555566543 4555 38
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEec
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGH 779 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD 779 (918)
|..++..+.+.+...+ .+.+.+++-+||
T Consensus 350 Ks~GV~~lQ~y~~~~~--~i~~~~tLHVGD 377 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEG--GIKPSETLHVGD 377 (408)
T ss_pred cHHhHHHHHHHHHhcc--CCCccceeeehh
Confidence 9999999888881111 167899999999
No 219
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=88.40 E-value=0.64 Score=46.71 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=42.0
Q ss_pred EEEEecCcccCCCCCCCCCCCccccc-ccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhH---HHHhcc
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQE 640 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L---~~~~~~ 640 (918)
++++|+|||++...- .++-++- ......+.+.++.+++++ .|..++-+|+|+.... +.|+..
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHH
Confidence 478999999997620 1111100 112567889999999996 6999999999997554 345544
No 220
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=88.06 E-value=0.61 Score=49.63 Aligned_cols=30 Identities=10% Similarity=-0.054 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHH
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 787 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedM 787 (918)
-....++++.++ .+++.+++||| ..+|..+
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~a 181 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDA 181 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH
Confidence 456777788887 57889999999 8777443
No 221
>PRK10671 copA copper exporting ATPase; Provisional
Probab=87.74 E-value=2.9 Score=53.36 Aligned_cols=69 Identities=14% Similarity=0.187 Sum_probs=49.9
Q ss_pred HHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 562 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 562 ~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
...+.+.+...+.+++-+||+++.... ....+-|...+.|++|.+ .|.+++++||.+....+...+.+
T Consensus 620 ~~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 620 AEITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 334555666678888889998764311 112355778899999986 68999999999998888777765
Q ss_pred C
Q 002468 642 N 642 (918)
Q Consensus 642 ~ 642 (918)
+
T Consensus 688 g 688 (834)
T PRK10671 688 G 688 (834)
T ss_pred C
Confidence 4
No 222
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=86.99 E-value=1.3 Score=46.73 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.6
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 3567888888888876 58899999999888888877764
No 223
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=86.95 E-value=1.3 Score=44.94 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.6
Q ss_pred eCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 745 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 745 p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+.|..|+..++++++.. ++.++++|| +.||..|-+.+.
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d 182 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSD 182 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCC
Confidence 56788998888886641 467999999 999999887764
No 224
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.73 E-value=1.5 Score=49.32 Aligned_cols=64 Identities=22% Similarity=0.308 Sum_probs=47.9
Q ss_pred CCeEEEEecCcccCCCC--CCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcc
Q 002468 571 NNRLLILGFNATLTEPV--DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 640 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~--~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 640 (918)
..|+|++|+|+||..-+ ++ +..+ + ....+.+.+.+.|++|.+ .|..++|+|..+...+...|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~-g~~~--i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGED-GIDN--L--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccC-Cccc--c--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 36899999999999753 11 0000 0 011245889999999986 6999999999999999988887
No 225
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=86.49 E-value=4.8 Score=44.31 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=60.4
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccE
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 422 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 422 (918)
.+++++..|-.|+.+.....++|+..+. +++ .+..|.+++. +.++ ++++++.. + + .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSN---PNLD----ELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCC---cCHH----HHHHHHHh-C---C-----CE
Confidence 3578999999999887777788876542 232 2333343321 2233 34444332 1 1 23
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe
Q 002468 423 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 474 (918)
Q Consensus 423 ~~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS 474 (918)
. +.++ .+++..+|..||+++.. -|.++.|+++++ .|.|+-
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i 266 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAI 266 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEE
Confidence 3 2333 36899999999999984 458999999995 555543
No 226
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=85.48 E-value=0.78 Score=45.77 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCcc-----cccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 573 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 573 rLI~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
|+++||+||||+.....+....+. .......+-|.+.+.|+.|++ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999875433110000 001223456889999999875 6899999999998888888776
No 227
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=85.38 E-value=1.5 Score=44.73 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=40.5
Q ss_pred CeEEEEecCcccCCCCCCCCCC-------Cc-c---cccccccCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHHhc
Q 002468 572 NRLLILGFNATLTEPVDTPGRR-------GD-Q---IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQ 639 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~-------~~-~---~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~~~ 639 (918)
.+||+||+|+||-+..-+--.. .. . .......+-|.+.++|++|.. .|..++++|=-+ .+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 4799999999999853211000 00 0 112345678899999999997 699999999543 456667777
Q ss_pred ccCce
Q 002468 640 EYNLW 644 (918)
Q Consensus 640 ~l~l~ 644 (918)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 76554
No 228
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=85.22 E-value=1.5 Score=49.30 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=35.7
Q ss_pred EEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCC----CCcEEEEc---CCChhhHHHHh
Q 002468 574 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF 638 (918)
Q Consensus 574 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~----g~~V~IvS---GR~~~~L~~~~ 638 (918)
.|+||+||||... ..+-+...++|+.|.. . +..++++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~g---------------~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG---------------KKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC---------------ccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5899999999975 2347889999999986 4 66666554 66677654444
No 229
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=85.11 E-value=1.7 Score=43.70 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=52.0
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccc---------------------ccccccCChhHHHHHHHhhcCCCCcEEEEc
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 627 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~---------------------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS 627 (918)
+.++..++||+|.||+.....|....... ......+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35678899999999998765542111000 00123456899999999985 68999999
Q ss_pred CCChhhHHHHhcccC
Q 002468 628 GSDRNVLDKNFQEYN 642 (918)
Q Consensus 628 GR~~~~L~~~~~~l~ 642 (918)
.-+....+..++.++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999999988888763
No 230
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=85.02 E-value=1.6 Score=46.42 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=30.8
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
.+-|.+.+.|..|.+ .+..++++|+.+...++..+..++
T Consensus 86 ~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 86 KPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 566788888888887 468899999998888877776543
No 231
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=84.46 E-value=24 Score=39.47 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=83.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEE-EEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 421 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvq-ig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 421 (918)
++..|+-=-.=|++-++...|+++.+++.. ++.++. .+.|+ ++ +++.++|.+.+.++ ||.. .
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~~---~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGAE---N 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCcc---c
Confidence 344454445668899999999998777543 243432 23333 22 34566777666554 5532 3
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC-ccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeE
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 488 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl~-EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~al 488 (918)
+..++..++.+|+.++++.+|+.++.--| .|+|..++=.- . +.|+++++-.-.-..+-+.++
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~-~----G~~v~l~r~n~fwqdl~e~gv 270 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQ-L----GKPVVLSRDNPFWQDLTEQGL 270 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHH-C----CCcEEEecCCchHHHHHhCCC
Confidence 55678999999999999999999998874 99998876433 3 478999887777766633443
No 232
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=84.25 E-value=0.93 Score=46.59 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=28.3
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+-|.+.+.|+.|.+ .|..++|+||.....++.+++.+++
T Consensus 81 ~~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 81 LRDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred CCccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhCC
Confidence 34567778888775 5788888888887777777776543
No 233
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=84.07 E-value=1.4 Score=50.63 Aligned_cols=17 Identities=12% Similarity=0.089 Sum_probs=15.0
Q ss_pred cCCeEEEEecCcccCCC
Q 002468 570 SNNRLLILGFNATLTEP 586 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~ 586 (918)
+.-+.++||+||||++.
T Consensus 129 ~~~~~VIFDlDGTLIDS 145 (381)
T PLN02575 129 CGWLGAIFEWEGVIIED 145 (381)
T ss_pred CCCCEEEEcCcCcceeC
Confidence 46789999999999985
No 234
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.99 E-value=1 Score=46.33 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccc-ccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
.++||||-||||.-..++ ++.. ++-...+.++++|.+|.+ .+..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 689999999999865321 1111 345678899999999996 79999999864
No 235
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=83.97 E-value=17 Score=39.49 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=30.0
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHH
Q 002468 743 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 786 (918)
Q Consensus 743 I~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDed 786 (918)
+...|.+||.++..++..++ ..++.||+|-| ......
T Consensus 156 lft~~~~KG~~L~~fL~~~~------~~pk~IIfIDD-~~~nl~ 192 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKIN------QSPKKIIFIDD-NKENLK 192 (252)
T ss_pred EEeCCCccHHHHHHHHHHcC------CCCCeEEEEeC-CHHHHH
Confidence 44678999999999999998 45789999999 654443
No 236
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=83.35 E-value=1.6 Score=45.89 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=30.2
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.|.+.+.|..|.+. ..++|+||-....++.++..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5778888888888862 48888888888888887777654
No 237
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=83.35 E-value=1.3 Score=48.55 Aligned_cols=54 Identities=13% Similarity=0.252 Sum_probs=40.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC---ChhhHHHHhcc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---DRNVLDKNFQE 640 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR---~~~~L~~~~~~ 640 (918)
+.+.++||+||||..- ..+=|...+.|++|.+ .|..++++|-. +...+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 3467999999999964 2455789999999997 58888888754 44545555544
No 238
>PRK08238 hypothetical protein; Validated
Probab=83.21 E-value=2.2 Score=50.69 Aligned_cols=46 Identities=17% Similarity=0.186 Sum_probs=37.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc--eEEeeCc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 650 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l--~liaenG 650 (918)
+.+++.+.|+++.+ .|..++|+|+.+...++.....+++ .++|.++
T Consensus 73 ~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 56899999999986 6999999999999999988887753 3555444
No 239
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=82.65 E-value=47 Score=37.93 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=26.7
Q ss_pred HHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe
Q 002468 434 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 474 (918)
Q Consensus 434 l~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS 474 (918)
...+|+.||+++..| |.+.+|+++++ .|.|+.
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g----~P~Vv~ 260 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIG----TPFVLA 260 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhC----CCEEEE
Confidence 357899999999999 88999999995 566664
No 240
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=82.65 E-value=1.3 Score=45.84 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=36.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 745 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 745 p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..|-.|..+++.++++.+ ++++.++++|| +.+|.+|++.++.
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~ 192 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGH 192 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCC
Confidence 356679999999999877 56789999999 9999999999975
No 241
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=82.16 E-value=15 Score=47.38 Aligned_cols=70 Identities=11% Similarity=0.218 Sum_probs=51.1
Q ss_pred HHHHHHHhcCCeEEEEecCc-----ccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 002468 562 DSIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 636 (918)
Q Consensus 562 ~~~~~y~~s~~rLI~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 636 (918)
...+.|.+...|.+++=|++ |++.... ..-.+-+++.++|++|.+ .|.+|+++||-.......
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ 560 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVS 560 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHH
Confidence 34455666677888888776 4443210 122466899999999986 699999999999999988
Q ss_pred HhcccCc
Q 002468 637 NFQEYNL 643 (918)
Q Consensus 637 ~~~~l~l 643 (918)
....+++
T Consensus 561 ia~~~Gi 567 (884)
T TIGR01522 561 IARRLGM 567 (884)
T ss_pred HHHHcCC
Confidence 8877553
No 242
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.64 E-value=7.2 Score=44.33 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=78.6
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCC---Ccc---CChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCH
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSL---RDG---MNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 495 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl---~EG---~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~ 495 (918)
+.|+....+.......|+.-|+++.=+. -++ ++.-..|+++|+ |++|.+-..++-..++.+--+|--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 3443333344667777777777765433 233 388899999994 777777777666556443333335799
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 002468 496 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 542 (918)
Q Consensus 496 ~~lA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 542 (918)
.++.+.|..++.-+ +||++..+.+++.| ..|+-..=+..++..+..
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999976 58888888887776 456666656566665554
No 243
>PLN02940 riboflavin kinase
Probab=81.47 E-value=2.2 Score=49.38 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=30.0
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 639 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 639 (918)
.+-|.+.+.|+.|.+ .+..++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 356778889999986 599999999999988877665
No 244
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=80.79 E-value=3 Score=43.60 Aligned_cols=62 Identities=21% Similarity=0.284 Sum_probs=45.7
Q ss_pred cCCeEEEEecCcccCCCC-CCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 570 SNNRLLILGFNATLTEPV-DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~-~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
..+++++||+|+||++.. ..+ . .....=|.+.+-|+.+.+ ...|+|=|..+..-++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~--~------~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE--T------GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC--C------ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 467899999999999752 111 0 122345778999999886 7899999998887877766654
No 245
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=80.74 E-value=3.5 Score=43.21 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|..+++.+++.++ .+++.+++||| ..+|.+|.+.++-
T Consensus 151 ~~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~ 187 (226)
T PRK13222 151 DPAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGC 187 (226)
T ss_pred ChHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCC
Confidence 5778999999988 56899999999 9999999998854
No 246
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=80.46 E-value=2.3 Score=43.91 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.7
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 632 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 632 (918)
..|-|.+.++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4577899999999996 57788888888754
No 247
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.29 E-value=3.3 Score=41.85 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=48.2
Q ss_pred CeEEEEecCcccCCCCCCCCC-CCcc---cc------cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 572 NRLLILGFNATLTEPVDTPGR-RGDQ---IR------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~-~~~~---~~------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
++.+++|+|+||+.....|.. ..+. ++ ..-...-|.+.+.|..|.+ ...|+|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 467999999999987655521 1110 00 0112456789999999986 4899999988888888888766
Q ss_pred C
Q 002468 642 N 642 (918)
Q Consensus 642 ~ 642 (918)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
No 248
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=79.54 E-value=1.1 Score=45.60 Aligned_cols=37 Identities=3% Similarity=-0.198 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
-+-..+.+++++++ .+++.+++||| ..+|.+.=+.++
T Consensus 143 P~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~aA~~aG 179 (188)
T PRK10725 143 PAPDTFLRCAQLMG------VQPTQCVVFED-ADFGIQAARAAG 179 (188)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHHHHHCC
Confidence 35567889999988 56789999999 888876655553
No 249
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=77.59 E-value=5.5 Score=42.32 Aligned_cols=37 Identities=11% Similarity=-0.107 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+...+.+++++++ ++++.+++||| ..+|..+-+.++-
T Consensus 153 ~p~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~aA~~aG~ 189 (229)
T PRK13226 153 HPLPLLVAAERIG------VAPTDCVYVGD-DERDILAARAAGM 189 (229)
T ss_pred CHHHHHHHHHHhC------CChhhEEEeCC-CHHHHHHHHHCCC
Confidence 4567888999998 67899999999 9999999888753
No 250
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=75.87 E-value=6.5 Score=43.27 Aligned_cols=21 Identities=14% Similarity=0.404 Sum_probs=18.3
Q ss_pred CccceecCCHHHHHHHHHHHH
Q 002468 885 TNARFLLQSSDEVVSFLKKLA 905 (918)
Q Consensus 885 s~A~y~l~~~~eV~~~L~~L~ 905 (918)
..|.|.++++.++.+++.+|.
T Consensus 251 ~~ad~~i~~~~eL~~~~~~~~ 271 (273)
T PRK13225 251 ACPDWLLETPSDLLQAVTQLM 271 (273)
T ss_pred CCCCEEECCHHHHHHHHHHHh
Confidence 468999999999999998774
No 251
>PRK11587 putative phosphatase; Provisional
Probab=75.69 E-value=1.6 Score=45.92 Aligned_cols=36 Identities=6% Similarity=-0.309 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+......+++.++ .+++++++||| ..+|..+=+.++
T Consensus 140 ~p~~~~~~~~~~g------~~p~~~l~igD-s~~di~aA~~aG 175 (218)
T PRK11587 140 EPDAYLLGAQLLG------LAPQECVVVED-APAGVLSGLAAG 175 (218)
T ss_pred CcHHHHHHHHHcC------CCcccEEEEec-chhhhHHHHHCC
Confidence 3567777888888 56899999999 999976655553
No 252
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=74.94 E-value=6 Score=38.44 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=20.4
Q ss_pred CCCceEEEEecCCCCcHHHHHHcC
Q 002468 769 TAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 769 ~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.+..+++++|| +.||+-|++.+.
T Consensus 91 k~~~k~vmVGn-GaND~laLr~AD 113 (152)
T COG4087 91 KRYEKVVMVGN-GANDILALREAD 113 (152)
T ss_pred CCCcEEEEecC-CcchHHHhhhcc
Confidence 36789999999 999999999884
No 253
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=74.37 E-value=1.9 Score=47.69 Aligned_cols=36 Identities=0% Similarity=-0.204 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+...+..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 204 ~p~~~~~a~~~~~------~~p~~~l~IGD-s~~Di~aA~~aG 239 (286)
T PLN02779 204 DPDIYNLAAETLG------VDPSRCVVVED-SVIGLQAAKAAG 239 (286)
T ss_pred CHHHHHHHHHHhC------cChHHEEEEeC-CHHhHHHHHHcC
Confidence 3567888999988 56899999999 999988877764
No 254
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=73.51 E-value=2.1 Score=44.25 Aligned_cols=35 Identities=14% Similarity=-0.032 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
.....+++++++ .+++.+++||| +. +|..+=+.++
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~IgD-~~~~Di~~A~~aG 198 (203)
T TIGR02252 163 PKIFQEALERAG------ISPEEALHIGD-SLRNDYQGARAAG 198 (203)
T ss_pred HHHHHHHHHHcC------CChhHEEEECC-CchHHHHHHHHcC
Confidence 456888999988 57899999999 86 7877666553
No 255
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=73.51 E-value=2 Score=46.39 Aligned_cols=35 Identities=6% Similarity=-0.114 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
+...+.+++++++ .+++.+++||| ...|..+=+.+
T Consensus 166 ~p~~~~~a~~~~~------~~~~~~l~vgD-s~~Di~aA~~a 200 (248)
T PLN02770 166 HPDPYLKALEVLK------VSKDHTFVFED-SVSGIKAGVAA 200 (248)
T ss_pred ChHHHHHHHHHhC------CChhHEEEEcC-CHHHHHHHHHC
Confidence 4567888899988 56799999999 88887665555
No 256
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=73.47 E-value=7.3 Score=40.37 Aligned_cols=36 Identities=8% Similarity=-0.030 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
|...+..+++.++ .+++.+++||| ..+|..+=+.++
T Consensus 133 ~~~~~~~~~~~~~------~~~~~~l~igD-~~~Di~aA~~~G 168 (205)
T TIGR01454 133 APDIVREALRLLD------VPPEDAVMVGD-AVTDLASARAAG 168 (205)
T ss_pred ChHHHHHHHHHcC------CChhheEEEcC-CHHHHHHHHHcC
Confidence 5678888999988 56899999999 999987777664
No 257
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.04 E-value=1.7 Score=44.96 Aligned_cols=31 Identities=6% Similarity=-0.111 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHH
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 787 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedM 787 (918)
+-..+..+++.++ .+++.+++||| ..+|..+
T Consensus 163 ~p~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~a 193 (197)
T TIGR01548 163 NPEPLILAAKALG------VEACHAAMVGD-TVDDIIT 193 (197)
T ss_pred CHHHHHHHHHHhC------cCcccEEEEeC-CHHHHHH
Confidence 4556778888887 56789999999 8888655
No 258
>PRK11590 hypothetical protein; Provisional
Probab=72.60 E-value=2 Score=45.20 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=27.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.|-.|-..++..+ + .+.+...|.|| +.+|.+|++.+.+
T Consensus 160 ~g~~K~~~l~~~~---~------~~~~~~~aY~D-s~~D~pmL~~a~~ 197 (211)
T PRK11590 160 LGHEKVAQLERKI---G------TPLRLYSGYSD-SKQDNPLLYFCQH 197 (211)
T ss_pred CChHHHHHHHHHh---C------CCcceEEEecC-CcccHHHHHhCCC
Confidence 4555665565554 3 23566789999 9999999999976
No 259
>PHA02597 30.2 hypothetical protein; Provisional
Probab=72.42 E-value=1.8 Score=44.63 Aligned_cols=33 Identities=12% Similarity=-0.052 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
|-..+..+++.++ ++.+++||| ..+|..+=+.+
T Consensus 132 kp~~~~~a~~~~~--------~~~~v~vgD-s~~di~aA~~a 164 (197)
T PHA02597 132 KEKLFIKAKEKYG--------DRVVCFVDD-LAHNLDAAHEA 164 (197)
T ss_pred cHHHHHHHHHHhC--------CCcEEEeCC-CHHHHHHHHHH
Confidence 5678888888875 467899999 88885554443
No 260
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=72.30 E-value=1.8e+02 Score=36.40 Aligned_cols=149 Identities=15% Similarity=0.163 Sum_probs=87.5
Q ss_pred CCeEEEEEecccccCCHHHH-HH---HHHHHHHhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCC
Q 002468 343 GRKVMLGVDRLDMIKGIPQK-LL---AFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 417 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~-L~---Af~~ll~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~ 417 (918)
+.-+++.|-|+..-|-.... |. -+.++ .+.|+.. ..+++|..|-...++... +++-+.|.+++..||..=...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT-HHH-HHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 45577899999999976663 33 34443 3456432 246677655444344322 355667777777777532222
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc----c-CCeEEE
Q 002468 418 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILV 490 (918)
Q Consensus 418 ~~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l----g-~~allV 490 (918)
+.-.|+|+. ..+-.--..++.+|||-+-+|+ .|.-|..-+=||.- |.+.+|..-|+.-++ | ++.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 233577665 4566666778999999999998 59999999998885 899999999986654 5 466777
Q ss_pred CCCCHHHHHH
Q 002468 491 NPWNITEVAN 500 (918)
Q Consensus 491 nP~D~~~lA~ 500 (918)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 3 45665544
No 261
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=72.09 E-value=4.1 Score=42.03 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=27.7
Q ss_pred HHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 753 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 753 ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.+..+++.++ .++..|+++|| +.||..|++.++
T Consensus 183 ~~~~~i~~l~------~~~~~v~~vGD-g~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQ------VKPGEVAMVGD-GVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHT------CTGGGEEEEES-SGGHHHHHHHSS
T ss_pred hHHHHHHHHh------cCCCEEEEEcc-CHHHHHHHHhCc
Confidence 5577888887 45779999999 999999999873
No 262
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=71.90 E-value=2.7 Score=45.24 Aligned_cols=31 Identities=6% Similarity=0.090 Sum_probs=0.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHH
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNA 614 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~ 614 (918)
+.++|+||+||||++. ..........+++++
T Consensus 1 ~~k~viFD~DGTLiDs-------------~~~~~~~a~~~~~~~ 31 (253)
T TIGR01422 1 KIEAVIFDWAGTTVDF-------------GSFAPTQAFVEAFAE 31 (253)
T ss_pred CceEEEEeCCCCeecC-------------CCccHHHHHHHHHHH
No 263
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=71.52 E-value=6.3 Score=40.89 Aligned_cols=37 Identities=8% Similarity=-0.066 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+-.++.++++.++ .+++.+++||| ..+|..+-+.++-
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~~~igD-s~~d~~aa~~aG~ 179 (213)
T TIGR01449 143 HPDPLLLAAERLG------VAPQQMVYVGD-SRVDIQAARAAGC 179 (213)
T ss_pred ChHHHHHHHHHcC------CChhHeEEeCC-CHHHHHHHHHCCC
Confidence 4568899999988 56889999999 9999999988854
No 264
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=71.51 E-value=2.2 Score=43.22 Aligned_cols=36 Identities=0% Similarity=-0.233 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+...+.++++.++ .+++.+++||| ...|..+=+.++
T Consensus 144 ~~~~~~~~~~~~~------~~~~~~v~IgD-~~~di~aA~~~G 179 (185)
T TIGR02009 144 HPETFLLAAELLG------VSPNECVVFED-ALAGVQAARAAG 179 (185)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCC
Confidence 3456788888887 56899999999 999988776664
No 265
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=70.92 E-value=1.9e+02 Score=32.74 Aligned_cols=87 Identities=18% Similarity=0.239 Sum_probs=48.0
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 002468 343 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 421 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~-~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 421 (918)
++.+++..|--.+.|--+. ...++.+.|.+. .+ .++.+|.|+. .+. ...+++++.++. .+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~----~vvl~ggp~e---~e~----~~~~~i~~~~~~-------~~ 243 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GY----EVVLTSGPDK---DDL----ACVNEIAQGCQT-------PP 243 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CC----eEEEEcCCCh---HHH----HHHHHHHHhcCC-------Cc
Confidence 4556677776667777552 333333333332 22 3444555431 111 112333332211 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECC
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTS 448 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~S 448 (918)
+.-+.|..+-.|+.++++.||++|-+-
T Consensus 244 ~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred cccccCCCCHHHHHHHHHhCCEEEecC
Confidence 334678899999999999999998764
No 266
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=70.70 E-value=19 Score=36.93 Aligned_cols=48 Identities=21% Similarity=0.051 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCEEEEeCCccchHHHHHHhhCCCCeEEE
Q 002468 192 FAAYIKANQMFADVVNKHYK---DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW 241 (918)
Q Consensus 192 w~~Y~~vN~~fa~~i~~~~~---~~DiIwvHDyhL~llp~~lr~~~~~~~I~~ 241 (918)
|+.=...=+..++.+.++.+ .+|+|..| +-+.-+-+||+..|++++..
T Consensus 43 ~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~ 93 (171)
T PF12000_consen 43 FEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIG 93 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEE
Confidence 55555555666666666655 46999999 77888889999999999764
No 267
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=70.16 E-value=13 Score=45.10 Aligned_cols=145 Identities=17% Similarity=0.181 Sum_probs=74.7
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEEecCCeeeeeccccCChHHHHHHHHHHHH
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEY 682 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~~~v~~il~~ 682 (918)
++-+.++-.|+-|.. .|.+|+..||--.+... .++-+-+.+-| +....... +..-+..+..-++.
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~--------ciAkSs~L~sR--~q~ihv~~----~v~sr~dah~eL~~ 722 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETAI--------CIAKSSRLFSR--GQYIHVIR----SVTSRGDAHNELNN 722 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhhee--------eeehhccceec--CceEEEEE----ecCCchHHHHHHHH
Confidence 355667777888775 79999999998776542 22222232222 11111111 11113445555555
Q ss_pred HHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhC
Q 002468 683 FTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV 762 (918)
Q Consensus 683 ~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~l~v~~G~~~vEI~p~gvnKG~ai~~Ll~~l~ 762 (918)
+...+..+.+-+ +.++.+.... ...|+.+.. .. -..+|=.+..-.-|+..++.|-++-
T Consensus 723 lR~k~~~aLvi~-G~Sl~~cl~y--------ye~Ef~el~-----~~-------~~aVv~CRctPtQKA~v~~llq~~t- 780 (1051)
T KOG0210|consen 723 LRRKTDCALVID-GESLEFCLKY--------YEDEFIELV-----CE-------LPAVVCCRCTPTQKAQVVRLLQKKT- 780 (1051)
T ss_pred hhcCCCcEEEEc-CchHHHHHHH--------HHHHHHHHH-----Hh-------cCcEEEEecChhHHHHHHHHHHHhh-
Confidence 544433333321 1111111111 111222111 00 1223334555557887776555442
Q ss_pred cCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 763 HSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 763 ~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
...|-|||| +.||..|++.++.
T Consensus 781 --------~krvc~IGD-GGNDVsMIq~A~~ 802 (1051)
T KOG0210|consen 781 --------GKRVCAIGD-GGNDVSMIQAADV 802 (1051)
T ss_pred --------CceEEEEcC-CCccchheeeccc
Confidence 367899999 9999999999976
No 268
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=70.02 E-value=2.8 Score=44.88 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCC-CCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d-~nDedMf~~~~ 792 (918)
+......+++.++ .+++.+++||| + ..|...=+.++
T Consensus 165 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG 201 (238)
T PRK10748 165 FSDMYHLAAEKLN------VPIGEILHVGD-DLTTDVAGAIRCG 201 (238)
T ss_pred cHHHHHHHHHHcC------CChhHEEEEcC-CcHHHHHHHHHCC
Confidence 4567788888887 57899999999 8 47876655543
No 269
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=68.38 E-value=9.8 Score=40.94 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=35.0
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 743 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 743 I~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
..|.+.-||..++++++...-.+ .+.+.|+++|| +.||.-.-..++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g---~~~~rviYiGD-G~nD~Cp~~~L~ 189 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRG---VPYDRVIYIGD-GRNDFCPALRLR 189 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcC---CCcceEEEECC-CCCCcCcccccC
Confidence 34788899999999998742111 46899999999 999977665543
No 270
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=68.33 E-value=5.2 Score=41.83 Aligned_cols=37 Identities=11% Similarity=-0.041 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~~ 793 (918)
+......++++++ .+++.+++||| +. +|..+=+.++-
T Consensus 152 ~~~~~~~~~~~~~------~~~~~~~~igD-s~~~di~~A~~aG~ 189 (221)
T TIGR02253 152 HPKIFYAALKRLG------VKPEEAVMVGD-RLDKDIKGAKNLGM 189 (221)
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-ChHHHHHHHHHCCC
Confidence 4467888999988 56789999999 87 89877766643
No 271
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=68.15 E-value=7.9 Score=39.97 Aligned_cols=21 Identities=14% Similarity=0.029 Sum_probs=18.6
Q ss_pred CceEEEEecCCCCcHHHHHHcC
Q 002468 771 IDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 771 ~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.+.+++||| +.+|..|.++++
T Consensus 144 ~~~~v~iGD-s~~D~~~~~aa~ 164 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTMLGEAD 164 (205)
T ss_pred CCeEEEEeC-CHHHHHHHHhCC
Confidence 467999999 999999998884
No 272
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=68.10 E-value=1.9e+02 Score=35.19 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=76.4
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 424 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 424 (918)
.+++++.+ +.|=.++.+.-+-++|+.-|+- +|++.+.+ +- .+....++.++++- |. +...++
T Consensus 431 vVf~c~~n--~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~---~~~~~~l~~la~~~----Gv-~~eRL~- 492 (620)
T COG3914 431 VVFCCFNN--YFKITPEVFALWMQILSAVPNS----VLLLKAGG---DD---AEINARLRDLAERE----GV-DSERLR- 492 (620)
T ss_pred EEEEecCC--cccCCHHHHHHHHHHHHhCCCc----EEEEecCC---Cc---HHHHHHHHHHHHHc----CC-Chhhee-
Confidence 34445555 6788889999999999999984 34444432 22 23455666666653 32 334565
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCC
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 477 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a 477 (918)
|....+.++..+-|..||+++-|=-|-| ..++.|++-. |++|++..+
T Consensus 493 f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 493 FLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred ecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 4678888899999999999998877666 5788999998 677777544
No 273
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=67.85 E-value=31 Score=45.37 Aligned_cols=44 Identities=18% Similarity=0.128 Sum_probs=33.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 650 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenG 650 (918)
+-+++.++|+.|.+ .|.+|+++||-........... .+++..+.
T Consensus 632 lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~--~~ii~~~~ 675 (1057)
T TIGR01652 632 LQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYS--CRLLSRNM 675 (1057)
T ss_pred hhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHH--hCCCCCCC
Confidence 55778899999886 6999999999999888776654 33444443
No 274
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=67.51 E-value=30 Score=45.20 Aligned_cols=46 Identities=13% Similarity=0.112 Sum_probs=35.4
Q ss_pred CcEEEEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 738 SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 738 ~~~vEI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
+.++-+|..-.-|+..++.+.+.. ..-++|||| +.||..|++.+.-
T Consensus 770 ~sViCCR~sPlQKA~Vv~lVk~~~---------~~~TLAIGD-GANDVsMIQ~AhV 815 (1151)
T KOG0206|consen 770 KSVICCRVSPLQKALVVKLVKKGL---------KAVTLAIGD-GANDVSMIQEAHV 815 (1151)
T ss_pred CEEEEccCCHHHHHHHHHHHHhcC---------CceEEEeeC-CCccchheeeCCc
Confidence 455666766778999999884332 356799999 9999999998754
No 275
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=67.17 E-value=32 Score=44.53 Aligned_cols=40 Identities=5% Similarity=0.295 Sum_probs=34.1
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+-+++.++|++|.+ .|.+|+++||..........+.+++
T Consensus 537 plr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 537 PPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHcCC
Confidence 366899999999886 6999999999999998888877554
No 276
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=66.87 E-value=20 Score=39.44 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=47.5
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
....+|+||+|-||...... .....|.+.+.|.+|.+ .|..+++=|--+.+.+...+..+++
T Consensus 120 ~~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~L 181 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELKL 181 (297)
T ss_pred CCCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhCC
Confidence 34569999999999987421 12357899999999997 5778888887777788777777643
No 277
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=65.94 E-value=27 Score=34.60 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
.-+.++..+++++ ++..|+||-|-..++..+. ..+.+++.+.++..+|+ .||++....++-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455556666665 4778889999877776665 67788999999999987 589988888877666666555
Q ss_pred cc
Q 002468 441 TD 442 (918)
Q Consensus 441 AD 442 (918)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 44
No 278
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=65.75 E-value=6.3 Score=41.63 Aligned_cols=51 Identities=22% Similarity=0.177 Sum_probs=32.8
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEE
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLR 654 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~ 654 (918)
+++.|...++++.|.+ .-+-+|+|-.-.+.+....+.+++..---||..+-
T Consensus 82 a~lvPgA~etm~~l~~--~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~ 132 (315)
T COG4030 82 AKLVPGAEETMATLQE--RWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVD 132 (315)
T ss_pred cccCCChHHHHHHHhc--cCCceEEeccHHHHHHHHHHhcCCCcccccccccc
Confidence 4555667777888775 44555666555666777777666665555666654
No 279
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=65.74 E-value=3.1 Score=44.22 Aligned_cols=17 Identities=12% Similarity=0.087 Sum_probs=14.3
Q ss_pred ccceecCCHHHHHHHHH
Q 002468 886 NARFLLQSSDEVVSFLK 902 (918)
Q Consensus 886 ~A~y~l~~~~eV~~~L~ 902 (918)
.|.|.+++++|+.+.|.
T Consensus 209 ~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 209 QADVLVEQPQLLWNPAT 225 (229)
T ss_pred CCCeeeCCHHHHHHHhc
Confidence 48899999999988764
No 280
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=65.43 E-value=3.9 Score=42.70 Aligned_cols=36 Identities=17% Similarity=0.008 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHh-CcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 750 KGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l-~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
+......+++.+ + .+++.+++||| +. +|..+=+.++
T Consensus 154 ~~~~~~~~~~~~~~------~~~~~~v~igD-~~~~di~~A~~~G 191 (224)
T TIGR02254 154 DKEIFNYALERMPK------FSKEEVLMIGD-SLTADIKGGQNAG 191 (224)
T ss_pred CHHHHHHHHHHhcC------CCchheEEECC-CcHHHHHHHHHCC
Confidence 456788888888 7 56889999999 87 6877766664
No 281
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=65.31 E-value=3.3 Score=45.10 Aligned_cols=37 Identities=3% Similarity=-0.278 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+...+..+++.++. .+++.+++||| ..+|..+=+.++
T Consensus 160 ~p~~~~~a~~~l~~-----~~~~e~l~IGD-s~~Di~aA~~aG 196 (267)
T PRK13478 160 YPWMALKNAIELGV-----YDVAACVKVDD-TVPGIEEGLNAG 196 (267)
T ss_pred ChHHHHHHHHHcCC-----CCCcceEEEcC-cHHHHHHHHHCC
Confidence 35667888888872 14689999999 999977766664
No 282
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=65.10 E-value=2.7e+02 Score=32.28 Aligned_cols=135 Identities=18% Similarity=0.210 Sum_probs=83.6
Q ss_pred eEEEEEeccccc-CCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEE
Q 002468 345 KVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 423 (918)
Q Consensus 345 ~vIl~VdRLd~~-KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 423 (918)
-+++..=|-.-. +++...+.|+.++++++|+.. +|.=.-| + +.. ++++ +.+++.. ..|+
T Consensus 206 ~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v-------~e~~---~~~L~~~--~~v~ 265 (383)
T COG0381 206 YILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRV-------RELV---LKRLKNV--ERVK 265 (383)
T ss_pred EEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhh-------hHHH---HHHhCCC--CcEE
Confidence 455566676655 999999999999999998753 3211111 1 222 2222 1122221 2355
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEE-EeCCCCchhhccC-CeEEECCCCHHHHHHH
Q 002468 424 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI-LSEFAGAAQSLGA-GAILVNPWNITEVANA 501 (918)
Q Consensus 424 ~~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lI-lSe~aG~~~~lg~-~allVnP~D~~~lA~a 501 (918)
+...+...+...|...|-+.+--| |=.--||-.-+ .|++ +=+.+.=.+.+.. ..++|+ .|.+.+.++
T Consensus 266 -li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~~ 334 (383)
T COG0381 266 -LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILDA 334 (383)
T ss_pred -EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHHH
Confidence 456889999999999997766555 33467887773 3433 3344443444422 335665 578999999
Q ss_pred HHHHhcCCH
Q 002468 502 IARALNMSP 510 (918)
Q Consensus 502 i~~aL~m~~ 510 (918)
+.++|+++.
T Consensus 335 ~~~ll~~~~ 343 (383)
T COG0381 335 ATELLEDEE 343 (383)
T ss_pred HHHHhhChH
Confidence 999999764
No 283
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=64.88 E-value=7.2 Score=41.95 Aligned_cols=38 Identities=13% Similarity=0.343 Sum_probs=20.9
Q ss_pred CChhHHHHHHHhhc-CCCCcEEEEcCCChhhHHHHhccc
Q 002468 604 LHPDLKQPLNALCH-DPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 604 ~~~~~~~~L~~L~~-d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+.|.++++|+.|++ ..+..++|+|--.--.++.+++..
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~ 110 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH 110 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC
Confidence 44555566666532 235556666666655666665543
No 284
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=63.97 E-value=4.1 Score=42.81 Aligned_cols=36 Identities=3% Similarity=-0.056 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+......+++.++ .+++.+++||| ..+|...=+.++
T Consensus 144 ~p~~~~~a~~~~~------~~p~~~l~igD-s~~di~aA~~aG 179 (221)
T PRK10563 144 DPALMFHAAEAMN------VNVENCILVDD-SSAGAQSGIAAG 179 (221)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCC
Confidence 5778889999988 57899999999 988877665553
No 285
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=63.65 E-value=12 Score=38.57 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=25.8
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
..+.|..++.++...+ .+..|+|+||-.-..+..+|..+
T Consensus 72 i~Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 72 IKIDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cccCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhh
Confidence 4566666666666554 57777777777776777776654
No 286
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=61.95 E-value=4.6 Score=41.13 Aligned_cols=35 Identities=9% Similarity=0.065 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
+-....+++++++ .+++.+++||| ...|...=+.+
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~l~vgD-~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAG------VDPERAIFFDD-SARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhC------CCccceEEEeC-CHHHHHHHHHc
Confidence 4467788899988 56789999999 87775544433
No 287
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=61.93 E-value=47 Score=43.17 Aligned_cols=39 Identities=10% Similarity=0.256 Sum_probs=33.9
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
.+-+++.+++++|.+ .|.+|+++||-...........++
T Consensus 579 plr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~G 617 (941)
T TIGR01517 579 PLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCG 617 (941)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcC
Confidence 467899999999886 699999999999999988877754
No 288
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=61.89 E-value=2.9e+02 Score=34.86 Aligned_cols=137 Identities=16% Similarity=0.222 Sum_probs=91.9
Q ss_pred CCeEEEEEecccccCCHHHHHHHHHHHHHhCc-CccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 002468 343 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS-DWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 421 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P-~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 421 (918)
+..+++.+=|++.-|-....+.=..++...-- ++..+|.+|..|-...++... .++-+.+...+..||.+ -.
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~a-K~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAA-KEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHH-HHHHHHHHHHHHhhccc------ce
Confidence 45678899999999987766665555544322 455567767656544444322 45666777788887763 25
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC--ccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEECC
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNP 492 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl~--EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVnP 492 (918)
|+|+.. .+-.--..++.+|||=..+|++ |.=|..=+=|+. .|.+-+|..-|+--++ |+++.++-.
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~al-----NGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAAL-----NGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCCCCccccCcCcchHHh-----cCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 777654 3444445678999999999874 555555555554 4899999999988665 468888854
No 289
>PRK09449 dUMP phosphatase; Provisional
Probab=59.64 E-value=4.7 Score=42.35 Aligned_cols=36 Identities=19% Similarity=-0.029 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
-.....+++.++. .+.+.+++||| +. +|..+=+.++
T Consensus 153 p~~~~~~~~~~~~-----~~~~~~~~vgD-~~~~Di~~A~~aG 189 (224)
T PRK09449 153 VAIFDYALEQMGN-----PDRSRVLMVGD-NLHSDILGGINAG 189 (224)
T ss_pred HHHHHHHHHHcCC-----CCcccEEEEcC-CcHHHHHHHHHCC
Confidence 4567888898872 24578999999 87 6877655553
No 290
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=59.28 E-value=2.6e+02 Score=35.64 Aligned_cols=150 Identities=12% Similarity=0.125 Sum_probs=100.2
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHH--HhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 343 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~-~L~Af~~ll--~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
+..+++.|-|++.-|-... +|.-+.++. ..+|+.. ..+++|..|-...++... +.+-+.|..++..||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMA-KLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHhccChhcCC
Confidence 5567888999999998777 666655553 3456521 246777666555455432 4566777888888876422223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 491 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l----g-~~allVn 491 (918)
...|+|+.. ..-.--..++.+|||-.-.|+ .|.=|..-+=||.- |.|.+|..-|+.-++ | ++++++-
T Consensus 608 ~lkVVFlen-Y~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLPN-YNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeCC-CChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhc-----CceeeecccchhHHHHHHhCcCcEEEeC
Confidence 345877654 455555678899999999987 47667666666663 899999988887665 4 5777775
Q ss_pred CCCHHHHHH
Q 002468 492 PWNITEVAN 500 (918)
Q Consensus 492 P~D~~~lA~ 500 (918)
.+.+++.+
T Consensus 682 -~~~~ev~~ 689 (797)
T cd04300 682 -LTAEEVEA 689 (797)
T ss_pred -CCHHHHHH
Confidence 35666554
No 291
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=58.97 E-value=4.4 Score=41.00 Aligned_cols=13 Identities=15% Similarity=0.501 Sum_probs=0.0
Q ss_pred EEEEecCcccCCC
Q 002468 574 LLILGFNATLTEP 586 (918)
Q Consensus 574 LI~lD~DGTL~~~ 586 (918)
+|+||+||||++.
T Consensus 1 ~iiFD~DGTL~ds 13 (185)
T TIGR01990 1 AVIFDLDGVITDT 13 (185)
T ss_pred CeEEcCCCccccC
No 292
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=58.74 E-value=34 Score=37.77 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=33.9
Q ss_pred cccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 601 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 601 ~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
...+.|.+.+.|..|.+ .|..++|+||-....++..+..++
T Consensus 119 ~l~l~pG~~efl~~L~~-~GIpv~IvS~G~~~~Ie~vL~~lg 159 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQ-HSIPVFIFSAGIGNVLEEVLRQAG 159 (277)
T ss_pred CCccCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHHcC
Confidence 45678888999999886 589999999999988888888744
No 293
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=57.72 E-value=11 Score=39.71 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=28.3
Q ss_pred CCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 747 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 747 gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|..|..+++.+.. +.+.+++||| +.||..|.+.+..
T Consensus 142 g~~K~~~l~~~~~----------~~~~~i~iGD-g~~D~~~a~~Ad~ 177 (214)
T TIGR03333 142 GCCKPSLIRKLSE----------PNDYHIVIGD-SVTDVEAAKQSDL 177 (214)
T ss_pred CCCHHHHHHHHhh----------cCCcEEEEeC-CHHHHHHHHhCCe
Confidence 4568888876632 2467899999 9999999998865
No 294
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=56.98 E-value=5.9 Score=41.81 Aligned_cols=38 Identities=18% Similarity=0.255 Sum_probs=27.9
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.|-.|-..++..+ + .+.+...+.|| +.+|.+||+.+..
T Consensus 159 ~g~~Kv~rl~~~~---~------~~~~~~~aYsD-S~~D~pmL~~a~~ 196 (210)
T TIGR01545 159 LGHEKVAQLEQKI---G------SPLKLYSGYSD-SKQDNPLLAFCEH 196 (210)
T ss_pred CChHHHHHHHHHh---C------CChhheEEecC-CcccHHHHHhCCC
Confidence 4556666666555 3 13456689999 9999999999976
No 295
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=56.52 E-value=13 Score=37.59 Aligned_cols=38 Identities=13% Similarity=0.274 Sum_probs=30.2
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
+.+.+.+.|+.|.+ .+..++|+|+.....++..+..++
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 110 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIG 110 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcC
Confidence 34568888888875 588999999999888888877654
No 296
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=55.77 E-value=5.2 Score=40.18 Aligned_cols=30 Identities=13% Similarity=0.002 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHH
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 787 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedM 787 (918)
-.....+++.++ .+++.+++||| ...|..+
T Consensus 142 p~~f~~~~~~~~------~~p~~~l~vgD-~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVG------LPPDRVLMVAA-HQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHC------CCHHHeEeEec-ChhhHHH
Confidence 445677888888 57899999999 8888654
No 297
>PLN03190 aminophospholipid translocase; Provisional
Probab=54.76 E-value=1.1e+02 Score=40.70 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=33.8
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 650 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenG 650 (918)
.+-+.+.++|++|.+ .|.+|+++||-........... .+++..+.
T Consensus 726 ~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi~IA~s--~~Ll~~~~ 770 (1178)
T PLN03190 726 KLQQGVPEAIESLRT-AGIKVWVLTGDKQETAISIGYS--SKLLTNKM 770 (1178)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHH--hCCCCCCC
Confidence 466889999999986 6999999999998877665544 33444443
No 298
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=54.46 E-value=4e+02 Score=30.84 Aligned_cols=191 Identities=16% Similarity=0.138 Sum_probs=93.4
Q ss_pred cEEEEEEEcCCC--CChHHHHHHHHHHHHHHHhhhccc-CCCCcccEEEeC-CCCCHHHHHHHHHHccEEEECCCCccCC
Q 002468 379 KVVLLQIAVPTR--TDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLD-RSLDFPALCALYAVTDVALVTSLRDGMN 454 (918)
Q Consensus 379 kv~Lvqig~psr--~~~~~y~~l~~~l~~lv~~IN~~~-g~~~~~pV~~~~-g~v~~~el~aly~~ADv~vv~Sl~EG~n 454 (918)
++.+.+.+.|.. |.+....+|. ++.+++.+-|-.- +..-|.++++.. .+++..-+..-+ +-.++.++|-.-+||
T Consensus 158 ~vkl~iLCnPHNP~Grvwt~eeL~-~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~-a~~~it~~saSKtFN 235 (388)
T COG1168 158 RVKLFILCNPHNPTGRVWTKEELR-KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF-ADNSITLTSASKTFN 235 (388)
T ss_pred CccEEEEeCCCCCCCccccHHHHH-HHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh-hcceEEEeecccccc
Confidence 466777787653 3344433333 4445555443221 112345555433 345544444433 334556677778888
Q ss_pred hhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHhcCHHHHH
Q 002468 455 LVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALN-MSPEEREKRHWHNFTHVTTHTAQEWA 533 (918)
Q Consensus 455 Lv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~-m~~~er~~r~~~~~~~v~~~~~~~W~ 533 (918)
|.-+.. ..+++=|+..-..+...|.+... .+..--.......++ .-..|.
T Consensus 236 laGL~~------------------------a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~-----~G~~WL 286 (388)
T COG1168 236 LAGLKC------------------------AYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYN-----QGEPWL 286 (388)
T ss_pred chhhhh------------------------eeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-----hchHHH
Confidence 875553 12222233333444444443222 222111112222222 235676
Q ss_pred HHHHHHHHHhHHHhhhccccCCCCCchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCC-hhHHHHH
Q 002468 534 ETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLH-PDLKQPL 612 (918)
Q Consensus 534 ~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~-~~~~~~L 612 (918)
+..+.-|++ |.+-+.+.+.+.-.++-+..-|||-+-+-+-. ...++ .++.+.|
T Consensus 287 d~L~~yl~~----------------N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r----------~l~l~d~~l~~~l 340 (388)
T COG1168 287 DELLEYLKD----------------NRDYVADFLNKHLPGVKVTEPQGTYLAWLDCR----------ELGLDDSELAEFL 340 (388)
T ss_pred HHHHHHHHH----------------HHHHHHHHHHhhCCCcEEecCCCceeeeeecc----------ccCCChHHHHHHH
Confidence 666655554 34444555555556777888889977553321 22344 3566666
Q ss_pred HHhhcCCCCcEEEEcCCCh
Q 002468 613 NALCHDPKTTIVVLSGSDR 631 (918)
Q Consensus 613 ~~L~~d~g~~V~IvSGR~~ 631 (918)
..-+ +|++-.|-.+
T Consensus 341 l~~a-----kVal~~G~~F 354 (388)
T COG1168 341 LEEA-----KVALSPGSTF 354 (388)
T ss_pred HHhh-----cEeccCCCcc
Confidence 5544 4888877643
No 299
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=53.82 E-value=60 Score=30.85 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=25.7
Q ss_pred CCCEEEEeCCcc-chHHHHHHhhCCCCeEEEEEcC
Q 002468 212 DGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHT 245 (918)
Q Consensus 212 ~~DiIwvHDyhL-~llp~~lr~~~~~~~I~~flH~ 245 (918)
..|+||+|...- .+++.++++.....++.+..|-
T Consensus 74 ~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 74 KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 379999999775 5667777665555888888883
No 300
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=52.95 E-value=21 Score=37.48 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.+-.|...++.+ +..+ ..++++|| +.||.+|++.+..
T Consensus 129 ~~~~K~~~l~~l-~~~~---------~~~v~vGD-s~nDl~ml~~Ag~ 165 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLY---------YRVIAAGD-SYNDTTMLSEAHA 165 (203)
T ss_pred CcchHHHHHHHH-HhhC---------CCEEEEeC-CHHHHHHHHhCCC
Confidence 345799988877 4443 26899999 9999999999965
No 301
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=52.89 E-value=1.9e+02 Score=36.58 Aligned_cols=150 Identities=14% Similarity=0.109 Sum_probs=98.4
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHH--HhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 343 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~-~L~Af~~ll--~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
+..+++.+-|++.-|-... +|.-..++. ..+|+.. ..+++|..|-...++... +.+-+.|..++..||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhcCChhhCC
Confidence 4456778999999998776 666655553 3456522 246777666555444332 4556677788888875322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 491 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVn 491 (918)
...|+|+. ...-.--..++.+|||-.-+|+ .|.=|..-+=||. .|+|.+|..-|+.-++ +++++++-
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~am-----NGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLAL-----NGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHh-----cCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 34577765 4455555678999999999887 4766666666666 3899999999986554 36788885
Q ss_pred CCCHHHHHH
Q 002468 492 PWNITEVAN 500 (918)
Q Consensus 492 P~D~~~lA~ 500 (918)
. +.+++.+
T Consensus 681 ~-~~~ev~~ 688 (798)
T PRK14985 681 H-TVEQVKA 688 (798)
T ss_pred C-CHHHHHH
Confidence 4 4555543
No 302
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=52.86 E-value=28 Score=37.01 Aligned_cols=48 Identities=13% Similarity=0.201 Sum_probs=36.9
Q ss_pred EEEeCCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 742 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 742 EI~p~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
...|++.=||..++++....-.++ ++.+.++|+|| +.||.--...++.
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~g---v~yer~iYvGD-G~nD~CP~l~Lr~ 203 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDG---VRYERLIYVGD-GANDFCPVLRLRA 203 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcC---CceeeEEEEcC-CCCCcCcchhccc
Confidence 347999999999999888764333 67889999999 9999865554443
No 303
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=52.69 E-value=7.6 Score=40.41 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
......++++++ .+++.+++||| ...|..+=+.+
T Consensus 155 p~~~~~~~~~~g------~~~~~~l~i~D-~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLG------VAPEECVFLDD-LGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHc
Confidence 456788888888 57899999999 87776665555
No 304
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=52.38 E-value=17 Score=43.93 Aligned_cols=82 Identities=12% Similarity=0.111 Sum_probs=52.2
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccc-cCChhHHHHHHHhhcCCCCcEEEEcCCChhhH---HHHhccc-Cce
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQEY-NLW 644 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L---~~~~~~l-~l~ 644 (918)
-+-++|+.|+|||++... ..++.++-... --+..+.++-.++.+ .|.+++-+|.|++... +.++..+ ..|
T Consensus 528 Wn~kIVISDIDGTITKSD----vLGh~lp~iGkDWTh~GVAkLyt~Ik~-NGYk~lyLSARaIgQA~~TR~yL~nv~QdG 602 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSD----VLGHVLPMIGKDWTHTGVAKLYTKIKE-NGYKILYLSARAIGQADSTRQYLKNVEQDG 602 (738)
T ss_pred cCCcEEEecCCCceEhhh----hhhhhhhhhcCcchhhhHHHHHHHHHh-CCeeEEEEehhhhhhhHHHHHHHHHHhhcC
Confidence 356899999999999651 11222221111 134567788888776 6999999999998665 3555555 345
Q ss_pred EEeeCceEEEec
Q 002468 645 LAAENGMFLRCT 656 (918)
Q Consensus 645 liaenGa~i~~~ 656 (918)
.+--.|=.+..+
T Consensus 603 ~~LPdGPViLSP 614 (738)
T KOG2116|consen 603 KKLPDGPVILSP 614 (738)
T ss_pred ccCCCCCEEeCC
Confidence 555555555433
No 305
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=51.82 E-value=1.4e+02 Score=32.84 Aligned_cols=203 Identities=18% Similarity=0.163 Sum_probs=99.0
Q ss_pred CCCEEEEeCCccchHHHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEeCHHHHHHHHHHHHHHh
Q 002468 212 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 291 (918)
Q Consensus 212 ~~DiIwvHDyhL~llp~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~r~l 291 (918)
++|+|.-......++..+|++.+.+.+++. |--|. +|. -..|+|..-.++|++. .+ .
T Consensus 70 ~Pdl~I~aGrrta~l~~~lkk~~~~~~vVq---I~~Pr------lp~--------~~fDlvivp~HD~~~~-~s----~- 126 (329)
T COG3660 70 RPDLIITAGRRTAPLAFYLKKKFGGIKVVQ---IQDPR------LPY--------NHFDLVIVPYHDWREE-LS----D- 126 (329)
T ss_pred CCceEEecccchhHHHHHHHHhcCCceEEE---eeCCC------CCc--------ccceEEeccchhhhhh-hh----c-
Confidence 478888899999999999999887755544 44442 232 1246766555555442 10 0
Q ss_pred ccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh--cCCeEEEEEecccccCCH-HHHHHHHHH
Q 002468 292 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGI-PQKLLAFEK 368 (918)
Q Consensus 292 g~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl~VdRLd~~KGi-~~~L~Af~~ 368 (918)
+|.. ++|+-=.+....+..- ....+..++.. +..++-|.||--.+.-.. +.+..-|..
T Consensus 127 -----------~~~N----ilpi~Gs~h~Vt~~~l----Aa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~ 187 (329)
T COG3660 127 -----------QGPN----ILPINGSPHNVTSQRL----AALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFAS 187 (329)
T ss_pred -----------cCCc----eeeccCCCCcccHHHh----hhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHH
Confidence 1111 2232111122221110 11112222211 234555667665444444 445555555
Q ss_pred HHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCC-CCHHHHHHHHHHccEEEEC
Q 002468 369 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYAVTDVALVT 447 (918)
Q Consensus 369 ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~~ADv~vv~ 447 (918)
++.+--+-.+ ..+++ .-||-. |+ .++..+.. ++|. .|+.|..+. ....=+.+++..||.++.|
T Consensus 188 ~l~k~l~~~g-~~~li--sfSRRT-p~--~~~s~l~~---~l~s-------~~~i~w~~~d~g~NPY~~~La~Adyii~T 251 (329)
T COG3660 188 LLVKILENQG-GSFLI--SFSRRT-PD--TVKSILKN---NLNS-------SPGIVWNNEDTGYNPYIDMLAAADYIIST 251 (329)
T ss_pred HHHHHHHhCC-ceEEE--EeecCC-cH--HHHHHHHh---cccc-------CceeEeCCCCCCCCchHHHHhhcceEEEe
Confidence 5443222121 22331 223322 11 12222221 1222 245544432 2334577889999999887
Q ss_pred CCCccCChhHHHHHHhcCCCCceEEEeCCCCc
Q 002468 448 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGA 479 (918)
Q Consensus 448 Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~ 479 (918)
- |..|| +-||.+.+ .||-+-+..+.
T Consensus 252 a--DSinM-~sEAasTg----kPv~~~~~~~~ 276 (329)
T COG3660 252 A--DSINM-CSEAASTG----KPVFILEPPNF 276 (329)
T ss_pred c--chhhh-hHHHhccC----CCeEEEecCCc
Confidence 5 55555 56888874 57766665555
No 306
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=51.64 E-value=14 Score=35.92 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=41.5
Q ss_pred EEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 575 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 575 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
.+.++++|++.- .++-+++.+.|++|.. ...|+|+||-.+.++.+.....+
T Consensus 17 ~~~~v~~tiatg---------------Gklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae~~g 67 (152)
T COG4087 17 KAGKVLYTIATG---------------GKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAEFVG 67 (152)
T ss_pred ecceEEEEEccC---------------cEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHHHcC
Confidence 456889999864 3567889999999996 39999999999999988877654
No 307
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=48.79 E-value=42 Score=36.45 Aligned_cols=22 Identities=5% Similarity=0.354 Sum_probs=18.0
Q ss_pred CccceecCCHHHHHHHHHHHHh
Q 002468 885 TNARFLLQSSDEVVSFLKKLAD 906 (918)
Q Consensus 885 s~A~y~l~~~~eV~~~L~~L~~ 906 (918)
..|.|.++++.|+.++|+.+..
T Consensus 238 ~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 238 AGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred cCCCeehhhHHHHHHHHHHHHH
Confidence 3588999999999999877644
No 308
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=48.20 E-value=2.6e+02 Score=32.71 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=56.3
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeC-------CCCchhhccCC-eEEECCCCHH
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-------FAGAAQSLGAG-AILVNPWNIT 496 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe-------~aG~~~~lg~~-allVnP~D~~ 496 (918)
....+++.+ ++..||+++.. -|+|.+ .|++..+ .|+|+=- .+...+.+|-+ ++...+....
T Consensus 288 v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~g----vP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~ 356 (406)
T COG1819 288 VADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAG----VPLVVIPDGADQPLNAERVEELGAGIALPFEELTEE 356 (406)
T ss_pred EecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcC----CCEEEecCCcchhHHHHHHHHcCCceecCcccCCHH
Confidence 346677664 78899999965 578765 6888873 3444321 12222223432 3444579999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 002468 497 EVANAIARALNMSPEEREKRHWHNFTHVTTHTA 529 (918)
Q Consensus 497 ~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 529 (918)
.++++|.++|+++. -+++.+++.+....++.
T Consensus 357 ~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g 387 (406)
T COG1819 357 RLRAAVNEVLADDS--YRRAAERLAEEFKEEDG 387 (406)
T ss_pred HHHHHHHHHhcCHH--HHHHHHHHHHHhhhccc
Confidence 99999999998653 23334444555555444
No 309
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=47.84 E-value=68 Score=38.37 Aligned_cols=64 Identities=20% Similarity=0.258 Sum_probs=45.5
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 567 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 567 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
+.....+.+++=++++++.... ..-.+-+++.++++.|.+ .|..++++||.........-..++
T Consensus 322 ~~~~g~~~~~~a~~~~~~g~i~-----------l~d~lr~~~~~~i~~l~~-~gi~~~~ltGD~~~~a~~ia~~lg 385 (499)
T TIGR01494 322 LAQSGLRVLAVASKETLLGLLG-----------LEDPLRDDAKETISELRE-AGIRVIMLTGDNVLTAKAIAKELG 385 (499)
T ss_pred HHhCCCEEEEEEECCeEEEEEE-----------ecCCCchhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3344556677778887665321 122456788888888887 688899999999998887777654
No 310
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=47.41 E-value=40 Score=41.09 Aligned_cols=33 Identities=21% Similarity=0.126 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.|...++++.+ +.+.++++|| +.||.+|++.+.
T Consensus 454 ~K~~~v~~l~~----------~~~~v~~VGD-g~nD~~al~~A~ 486 (562)
T TIGR01511 454 DKAALIKELQE----------KGRVVAMVGD-GINDAPALAQAD 486 (562)
T ss_pred HHHHHHHHHHH----------cCCEEEEEeC-CCccHHHHhhCC
Confidence 67777776644 2468999999 999999998873
No 311
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=46.76 E-value=27 Score=30.08 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=28.4
Q ss_pred HHHHHHHHhCcCCCCCCCCceEEEEecCC-CCcHHHHHHcCc
Q 002468 753 AIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFEP 793 (918)
Q Consensus 753 ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d-~nDedMf~~~~~ 793 (918)
.+..+++.++ .+++.+++||| . .+|+.+=+.++-
T Consensus 9 ~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~a~~~G~ 43 (75)
T PF13242_consen 9 MLEQALKRLG------VDPSRCVMVGD-SLETDIEAAKAAGI 43 (75)
T ss_dssp HHHHHHHHHT------SGGGGEEEEES-STTTHHHHHHHTTS
T ss_pred HHHHHHHHcC------CCHHHEEEEcC-CcHhHHHHHHHcCC
Confidence 4667788887 57899999999 8 999999888865
No 312
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=46.53 E-value=53 Score=33.35 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 751 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 751 G~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
-..+..+++.++ .+++++++||| ..+|..+-+.++
T Consensus 106 p~~~~~~~~~l~------~~~~~~~~VgD-s~~Di~~A~~aG 140 (181)
T PRK08942 106 PGMLLSIAERLN------IDLAGSPMVGD-SLRDLQAAAAAG 140 (181)
T ss_pred HHHHHHHHHHcC------CChhhEEEEeC-CHHHHHHHHHCC
Confidence 456778888888 57899999999 999988877774
No 313
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=45.99 E-value=12 Score=43.11 Aligned_cols=78 Identities=18% Similarity=0.234 Sum_probs=48.1
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCcccccc--cccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEE
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQIREM--ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 646 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~--~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~li 646 (918)
+.+.+++++|+|||++.... .++ +..+ .---+..+...-.++.. .|..|.-.|.|++..+...-. .+..|
T Consensus 372 r~n~kiVVsDiDGTITkSD~----~Gh-v~~miGkdwth~gVAkLYtdI~r-NGYkI~YltsR~~Gqa~sTrs--ylrni 443 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDA----LGH-VKQMIGKDWTHNGVAKLYTDIDR-NGYKIKYLTSRSYGQADSTRS--YLRNI 443 (580)
T ss_pred eCCCcEEEEecCCcEEehhh----HHH-HHHHhccchhhcchhhhhhhhcc-CceEEEEEecccccchhhhhh--HHHhh
Confidence 35678999999999997510 000 0000 01124456666666664 577888899999877643322 25677
Q ss_pred eeCceEEE
Q 002468 647 AENGMFLR 654 (918)
Q Consensus 647 aenGa~i~ 654 (918)
++||+.+-
T Consensus 444 eQngykLp 451 (580)
T COG5083 444 EQNGYKLP 451 (580)
T ss_pred hhcCccCC
Confidence 88888763
No 314
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=45.56 E-value=64 Score=36.05 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhh------cc--CCeEEECCCCHHHH
Q 002468 427 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS------LG--AGAILVNPWNITEV 498 (918)
Q Consensus 427 g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~------lg--~~allVnP~D~~~l 498 (918)
+..+ +++.++|..||++|..+ |++ +..|+++++ .|+|+.-..|-.++ +. ..|+.++..+. ++
T Consensus 235 ~~~~-~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g----~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~ 304 (321)
T TIGR00661 235 RITT-DNFKELIKNAELVITHG---GFS-LISEALSLG----KPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RL 304 (321)
T ss_pred ECCh-HHHHHHHHhCCEEEECC---ChH-HHHHHHHcC----CCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HH
Confidence 4444 78999999999999877 555 588999995 67777777664443 21 23567766666 45
Q ss_pred HHHHHHHhcCC
Q 002468 499 ANAIARALNMS 509 (918)
Q Consensus 499 A~ai~~aL~m~ 509 (918)
.+++...++++
T Consensus 305 ~~~~~~~~~~~ 315 (321)
T TIGR00661 305 LEAILDIRNMK 315 (321)
T ss_pred HHHHHhccccc
Confidence 55555555543
No 315
>PRK06769 hypothetical protein; Validated
Probab=45.36 E-value=35 Score=34.67 Aligned_cols=36 Identities=11% Similarity=-0.061 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+-..+.++++.++ .+++++++||| ..+|..+=+.++
T Consensus 95 ~p~~~~~~~~~l~------~~p~~~i~IGD-~~~Di~aA~~aG 130 (173)
T PRK06769 95 STGMLLQAAEKHG------LDLTQCAVIGD-RWTDIVAAAKVN 130 (173)
T ss_pred CHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCC
Confidence 3456677888887 56899999999 887766655553
No 316
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.02 E-value=47 Score=39.19 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=56.8
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCC-CCCCCCCcccc-cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPV-DTPGRRGDQIR-EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 636 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~-~~p~~~~~~~~-~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 636 (918)
.+..++.+-.....|+++||+|+||..-+ .+-|-.+=++. ......-.+..+.+..|.+ .|..++|+|=....+.++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 45667777777889999999999998632 11111110110 0112344567788888886 699999999999999998
Q ss_pred HhcccC
Q 002468 637 NFQEYN 642 (918)
Q Consensus 637 ~~~~l~ 642 (918)
.|..-+
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 887643
No 317
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=44.66 E-value=2.1e+02 Score=35.97 Aligned_cols=194 Identities=13% Similarity=0.084 Sum_probs=114.5
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----c----CCeEEECCCCHH
Q 002468 426 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----G----AGAILVNPWNIT 496 (918)
Q Consensus 426 ~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g----~~allVnP~D~~ 496 (918)
-+.++.+.....++.-++.++|.-|+-.=+.++|+-..+ .+-..+|++...-..+.+ + .-.++.-|+|.-
T Consensus 231 vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~~~a~lIlTgg~~~~~~v~~l~~~a~~~~ipVl~t~~dT~ 309 (684)
T PRK05632 231 VCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-PPIAGLLLTGGYEPDPRIAKLCEGAFETGLPVLSVDTNTY 309 (684)
T ss_pred EEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-CCceEEEEcCCCCCCHHHHHHHhhcccCCCCEEEecCCHH
Confidence 466677888888887788777788877667777762111 011236666544433322 1 124677899999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhHHHhhhccccCCCCCchHHHHHHHHhcCCeEE
Q 002468 497 EVANAIARALNMSPEEREKRHWHNFTHVTTH-TAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLL 575 (918)
Q Consensus 497 ~lA~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI 575 (918)
+.|..|.++..--..+-.++.+...+.+.+| |..+|.+. +. . ...+...++|..-...+++.-+..++|++
T Consensus 310 ~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~---~----~~~~~~~~~p~~~~~~l~~~a~~~~~~i~ 381 (684)
T PRK05632 310 QTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT---A----TSERSRRLSPPAFRYQLTERARAAKKRIV 381 (684)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc---c----CCCCCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999776432112233455667777777 77676664 22 0 00122334455456677777776666655
Q ss_pred EEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceEEeeCceEEEe
Q 002468 576 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 655 (918)
Q Consensus 576 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~liaenGa~i~~ 655 (918)
|-. . -.++++++...+.+ .|..-.|.-|+. +.+++.+...++.+ . .+..|.+
T Consensus 382 ~~e--------~----------------~d~~~l~Aa~~~~~-~g~~~~iLvG~~-~~I~~~~~~~~~~l-~-~~~~Ii~ 433 (684)
T PRK05632 382 LPE--------G----------------DEPRTLKAAAICLE-RGIADCVLLGNP-EEIRRVAAAQGVDL-P-AGIEIID 433 (684)
T ss_pred EeC--------C----------------CCHHHHHHHHHHHH-cCCceEEEECCH-HHHHHHHHHcCCCc-c-CCcEEEC
Confidence 432 1 13577888777665 466655666886 46666666654322 1 4566654
Q ss_pred c
Q 002468 656 T 656 (918)
Q Consensus 656 ~ 656 (918)
.
T Consensus 434 ~ 434 (684)
T PRK05632 434 P 434 (684)
T ss_pred C
Confidence 3
No 318
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=44.62 E-value=3.8e+02 Score=34.13 Aligned_cols=150 Identities=11% Similarity=0.112 Sum_probs=99.1
Q ss_pred CCeEEEEEecccccCCHHH-HHHHHHHHH--HhCcCcc-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCC
Q 002468 343 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 418 (918)
Q Consensus 343 ~~~vIl~VdRLd~~KGi~~-~L~Af~~ll--~~~P~~~-~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 418 (918)
+..+++.+-|++.-|-... +|.-+.++. ..+|+.. ..+++|..|-...++... +.+-+.|..++..||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMA-KLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHH-HHHHHHHHHHHHHhccChhhCC
Confidence 4456788999999998776 666655553 3456431 246677666555555433 4566677888888876422223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CccCChhHHHHHHhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 002468 419 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 491 (918)
Q Consensus 419 ~~pV~~~~g~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l----g-~~allVn 491 (918)
.-.|+|+.. ..-.--..++.+|||-.-.|+ .|.=|..-+=||.- |.|.+|..-|+.-++ | ++++++-
T Consensus 605 ~lkVVFlen-Y~VslAe~iipaaDvseqistag~EASGTsnMK~alN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 605 KLKVVFVPN-YNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred ceeEEEeCC-CChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc-----CcceeecccchhHHHHHHhCcccEEEcC
Confidence 345877654 455555678899999999987 47677766667663 899999988887665 3 5677774
Q ss_pred CCCHHHHHH
Q 002468 492 PWNITEVAN 500 (918)
Q Consensus 492 P~D~~~lA~ 500 (918)
.+.+++++
T Consensus 679 -~~~~ev~~ 686 (794)
T TIGR02093 679 -LTVEEVEA 686 (794)
T ss_pred -CCHHHHHH
Confidence 45666554
No 319
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=44.52 E-value=11 Score=38.05 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=27.6
Q ss_pred CHHHHHHHH---HHHhCcCCCCCCCCceEEEEecCCCCcHHHHH
Q 002468 749 TKGAAIDRI---LAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 789 (918)
Q Consensus 749 nKG~ai~~L---l~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~ 789 (918)
+|..+++.+ ... + .+.+.++++|| +.||.+|++
T Consensus 157 ~K~~~l~~~~~~~~~-~------~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-D------IDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-T------HTCCEEEEEES-SGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-C------CCCCeEEEEEC-CHHHHHHhC
Confidence 699999999 443 3 35788999999 999999986
No 320
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=43.45 E-value=67 Score=34.38 Aligned_cols=62 Identities=5% Similarity=0.168 Sum_probs=42.0
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcC-CChhhHHHH
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG-SDRNVLDKN 637 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG-R~~~~L~~~ 637 (918)
+..++.+.|.+.-..++++|+|||+.... ...+.++++++..+..|.+-=| |+.++++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~~-------------------~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l 91 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGKP-------------------KNLDVVKNIIRETGLKVQVGGGLRTYESIKDA 91 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCCc-------------------chHHHHHHHHhhCCCCEEEcCCCCCHHHHHHH
Confidence 67778888877666799999999997641 2456677777643444444333 577888777
Q ss_pred hc
Q 002468 638 FQ 639 (918)
Q Consensus 638 ~~ 639 (918)
+.
T Consensus 92 ~~ 93 (228)
T PRK04128 92 YE 93 (228)
T ss_pred HH
Confidence 65
No 321
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=42.62 E-value=14 Score=38.55 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 752 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 752 ~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
..-+.+++.++ .+++.+++|||.-.||+..-+.+
T Consensus 158 ~~f~~~~~~~g------~~p~~~l~VgD~~~~di~gA~~~ 191 (229)
T COG1011 158 EIFEYALEKLG------VPPEEALFVGDSLENDILGARAL 191 (229)
T ss_pred HHHHHHHHHcC------CCcceEEEECCChhhhhHHHHhc
Confidence 34567788887 56899999999444554444444
No 322
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=41.93 E-value=2.4e+02 Score=31.02 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc------cC--CeEEECCC--CHHHH
Q 002468 429 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL------GA--GAILVNPW--NITEV 498 (918)
Q Consensus 429 v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l------g~--~allVnP~--D~~~l 498 (918)
.+..++..++..||++|-.+ |+|+ ..|+++++ .|+|+=...|..|+. .. -|+.+++. +++.+
T Consensus 239 ~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g----~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 239 FSTPDFAELMAAADLVISKG---GYTT-ISEALALG----KPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred cChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcC----CCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 34578899999999999765 5543 68999995 566666665655554 12 23444443 56788
Q ss_pred HHHHHH
Q 002468 499 ANAIAR 504 (918)
Q Consensus 499 A~ai~~ 504 (918)
+++|++
T Consensus 311 ~~~l~~ 316 (318)
T PF13528_consen 311 AEFLER 316 (318)
T ss_pred HHHHhc
Confidence 887764
No 323
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=41.69 E-value=39 Score=41.21 Aligned_cols=63 Identities=21% Similarity=0.338 Sum_probs=50.9
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 569 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
+...+.++++.||+++.... ....+-|...++|++|.+ .|..++|+||.+....+...+.+++
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~-----------~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA-----------LEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE-----------ecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 44568899999999876421 123567899999999987 5899999999999999999888766
No 324
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=40.99 E-value=15 Score=37.93 Aligned_cols=14 Identities=14% Similarity=0.320 Sum_probs=0.0
Q ss_pred eEEEEecCcccCCC
Q 002468 573 RLLILGFNATLTEP 586 (918)
Q Consensus 573 rLI~lD~DGTL~~~ 586 (918)
++|+||+||||++.
T Consensus 1 ~~viFDldgvL~d~ 14 (199)
T PRK09456 1 MLYIFDLGNVIVDI 14 (199)
T ss_pred CEEEEeCCCccccC
No 325
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=40.53 E-value=5e+02 Score=29.19 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHccEEEECCCCccCChhHHHHHHhc
Q 002468 430 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 464 (918)
Q Consensus 430 ~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~ 464 (918)
+..=+.+++..||.++||. |..+|+ .||++++
T Consensus 218 ~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG 249 (311)
T PF06258_consen 218 GENPYLGFLAAADAIVVTE--DSVSMV-SEAAATG 249 (311)
T ss_pred CCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcC
Confidence 3445778888888888887 666664 6888873
No 326
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=40.24 E-value=25 Score=40.17 Aligned_cols=53 Identities=13% Similarity=0.333 Sum_probs=36.3
Q ss_pred cCCeEEEEecCcccCCCCCC---CCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcC
Q 002468 570 SNNRLLILGFNATLTEPVDT---PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 628 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~---p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG 628 (918)
-..+++.|||||||++.... |.. .+ +-..+.++.-.-|++|.+ +|+.++|-|-
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~-~~----dw~~l~~~vp~Klktl~~-~g~~l~iftn 128 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKG-SM----DWRILFPEVPSKLKTLYQ-DGIKLFIFTN 128 (422)
T ss_pred CCcceEEEecCCceeecCCcceeecc-Cc----cceeeccccchhhhhhcc-CCeEEEEEec
Confidence 35689999999999986320 100 01 123456777788899997 5999998764
No 327
>COG4996 Predicted phosphatase [General function prediction only]
Probab=40.21 E-value=39 Score=32.96 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=13.1
Q ss_pred eEEEEecCcccCCCC
Q 002468 573 RLLILGFNATLTEPV 587 (918)
Q Consensus 573 rLI~lD~DGTL~~~~ 587 (918)
++|+||.||||.+..
T Consensus 1 ~~i~~d~d~t~wdhh 15 (164)
T COG4996 1 RAIVFDADKTLWDHH 15 (164)
T ss_pred CcEEEeCCCcccccc
Confidence 579999999999864
No 328
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=39.96 E-value=43 Score=38.90 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=50.9
Q ss_pred HHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc----c---CCeE-EEC-----C-CCHHHH
Q 002468 433 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G---AGAI-LVN-----P-WNITEV 498 (918)
Q Consensus 433 el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l----g---~~al-lVn-----P-~D~~~l 498 (918)
++-.+-+.|.+.|+||++|..|.++.|....+ -|-|.+..+|..-.+ . .-|| +|+ | .+.+++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG----iPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec----cccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 44567789999999999999999999988873 677877777765544 1 1244 443 2 345677
Q ss_pred HHHHHHHhc
Q 002468 499 ANAIARALN 507 (918)
Q Consensus 499 A~ai~~aL~ 507 (918)
++-|.....
T Consensus 569 ~~~m~~F~~ 577 (692)
T KOG3742|consen 569 ASFMYEFCK 577 (692)
T ss_pred HHHHHHHHH
Confidence 777776665
No 329
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=39.22 E-value=23 Score=37.19 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 748 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 748 vnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
..|..+++.+ + ...+.+++||| +.+|..|.+.++-
T Consensus 147 ~~K~~~l~~~----~------~~~~~~i~iGD-s~~Di~aa~~Ag~ 181 (219)
T PRK09552 147 CCKPSLIRKL----S------DTNDFHIVIGD-SITDLEAAKQADK 181 (219)
T ss_pred CchHHHHHHh----c------cCCCCEEEEeC-CHHHHHHHHHCCc
Confidence 4588776643 3 24568999999 9999999988754
No 330
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=38.88 E-value=1.2e+02 Score=40.15 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=34.2
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+-+++.++|++|.+ .|.+|+++||............+++
T Consensus 646 p~r~~v~~aI~~l~~-aGIkv~MiTGD~~~tA~~iA~~~Gi 685 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQ-AGINVHMLTGDFPETAKAIAQEVGI 685 (1053)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCC
Confidence 466889999999886 7999999999999999888877543
No 331
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=38.56 E-value=80 Score=31.77 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHc---cEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHH
Q 002468 430 DFPALCALYAVT---DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 501 (918)
Q Consensus 430 ~~~el~aly~~A---Dv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~l-----g~~allVnP~D~~~lA~a 501 (918)
+.+|-.+..+.+ -+.|---+-+|=||.+.|++.....+-..+|++-++.++.-+ |..-+|--|-|.+++..|
T Consensus 41 ~~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aA 120 (182)
T COG4567 41 SVEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAA 120 (182)
T ss_pred cHHHHHHHHhcCCCceEEEEeeecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHH
Confidence 345544444433 223333456899999999999887777899999999888765 555588999999999999
Q ss_pred HHHH
Q 002468 502 IARA 505 (918)
Q Consensus 502 i~~a 505 (918)
+.+.
T Consensus 121 l~~~ 124 (182)
T COG4567 121 LLRR 124 (182)
T ss_pred Hhhc
Confidence 8876
No 332
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=36.47 E-value=69 Score=33.23 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=13.5
Q ss_pred CeEEEEecCcccCCC
Q 002468 572 NRLLILGFNATLTEP 586 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~ 586 (918)
.++++||+||||++.
T Consensus 1 ~k~viFD~DGTL~d~ 15 (224)
T TIGR02254 1 YKTLLFDLDDTILDF 15 (224)
T ss_pred CCEEEEcCcCccccc
Confidence 378999999999987
No 333
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=36.19 E-value=65 Score=40.70 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=54.5
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 564 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
++.+.....+.+++-+||+++.... ..-.+-++..++|++|.+ .|..++++||.+......+.+.+++
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~-----------l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA-----------LQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE-----------EecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 4556667778899999999875421 123467899999999997 6999999999999999999988776
No 334
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=35.75 E-value=48 Score=34.01 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=51.9
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCC-CC---------cccc-----------cccccCChhHHHHHHHhhc
Q 002468 559 READSIERYLRSNNRLLILGFNATLTEPVDTPGR-RG---------DQIR-----------EMELKLHPDLKQPLNALCH 617 (918)
Q Consensus 559 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~-~~---------~~~~-----------~~~~~~~~~~~~~L~~L~~ 617 (918)
.+.++......-+.-.+-||+|.|++=.. |+- ++ +-++ -+.-.++.+....|-.+.+
T Consensus 50 SvaqI~~SLeG~~Pi~VsFDIDDTvLFsS--p~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq 127 (237)
T COG3700 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSS--PGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EHHHHHhhhcCCCCeeEeeccCCeeEecc--cccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 45556565655566678889999988542 210 01 1111 0234577887777777777
Q ss_pred CCCCcEEEEcCCChhhHHHHhccc
Q 002468 618 DPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 618 d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
..|-.|+.+|||+....+..-+.+
T Consensus 128 ~RGD~i~FvTGRt~gk~d~vsk~L 151 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDTVSKTL 151 (237)
T ss_pred hcCCeEEEEecCCCCcccccchhH
Confidence 789999999999987665544443
No 335
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=35.29 E-value=1.3e+02 Score=36.29 Aligned_cols=78 Identities=21% Similarity=0.119 Sum_probs=57.7
Q ss_pred CCCCCHHHHHHHHHHccEEE-ECCCCccCChhHHHHHHhcCCCCceE-------------------------EEeCCCCc
Q 002468 426 DRSLDFPALCALYAVTDVAL-VTSLRDGMNLVSYEFVACQDLKKGVL-------------------------ILSEFAGA 479 (918)
Q Consensus 426 ~g~v~~~el~aly~~ADv~v-v~Sl~EG~nLv~lEamA~~~~~~g~l-------------------------IlSe~aG~ 479 (918)
.|.++.+|+..+++.|.||| +-.-+| |=.++||||.+ .|- +.|.-..+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G----~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~ 400 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANG----CVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYA 400 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcC----CccccccCCCCCcccccccccCCCCcceeccCChHH
Confidence 57889999999999999999 444467 45699999986 222 22333322
Q ss_pred hhhcc-CCeEEECCCCHHHHHHHHHHHhcCC
Q 002468 480 AQSLG-AGAILVNPWNITEVANAIARALNMS 509 (918)
Q Consensus 480 ~~~lg-~~allVnP~D~~~lA~ai~~aL~m~ 509 (918)
...+| ...+.|+-.|.+++-+||+++|.++
T Consensus 401 e~~iG~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 401 EEFIGEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred HhhCCCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 22344 3567899999999999999999975
No 336
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=34.88 E-value=3.8e+02 Score=28.91 Aligned_cols=112 Identities=18% Similarity=0.174 Sum_probs=65.5
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 424 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 424 (918)
-++++-+|+...-=+.....-+..|+...| +|++| |+-+...+|..+-+...+...+++. . +..
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~~~~----~v~fI----PtAs~~~~~~~y~~~~~~af~~lG~-------~-v~~ 66 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLAGRR----KAVFI----PYAGVTQSWDDYTAKVAEALAPLGI-------E-VTG 66 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHcCCC----eEEEE----CCCCCCCCHHHHHHHHHHHHHHCCC-------E-EEE
Confidence 356777887774334666666667766332 45565 4444334455555555555555443 2 333
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCC----------CccCChhHHHHHHhcCCCCceEEEeCCCCch
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSL----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAA 480 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl----------~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~ 480 (918)
+.. .++..+.+..||+..++-= .-|+--...|++.. |.+++-..||+.
T Consensus 67 l~~---~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~-----G~~~~G~SAGAi 124 (233)
T PRK05282 67 IHR---VADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKN-----GTPYIGWSAGAN 124 (233)
T ss_pred ecc---chhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHC-----CCEEEEECHHHH
Confidence 322 2445677899998888752 23444456787664 677888888874
No 337
>PLN03007 UDP-glucosyltransferase family protein
Probab=34.44 E-value=7.9e+02 Score=29.32 Aligned_cols=75 Identities=15% Similarity=0.051 Sum_probs=43.2
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe-----CCCCch---hhccCCeEEEC-----
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----EFAGAA---QSLGAGAILVN----- 491 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS-----e~aG~~---~~lg~~allVn----- 491 (918)
+.+.+++.+ ++..+++.++=+ .-|+| ..+|+++++ .|+|+- .+..+. +.+ .-|+-+.
T Consensus 349 v~~w~PQ~~---iL~h~~v~~fvt-H~G~n-S~~Eal~~G----VP~v~~P~~~DQ~~na~~~~~~~-~~G~~~~~~~~~ 418 (482)
T PLN03007 349 IRGWAPQVL---ILDHQATGGFVT-HCGWN-SLLEGVAAG----LPMVTWPVGAEQFYNEKLVTQVL-RTGVSVGAKKLV 418 (482)
T ss_pred EecCCCHHH---HhccCccceeee-cCcch-HHHHHHHcC----CCeeeccchhhhhhhHHHHHHhh-cceeEecccccc
Confidence 356788765 455565533222 46777 678999983 344432 222222 222 2233321
Q ss_pred ----C-CCHHHHHHHHHHHhcCC
Q 002468 492 ----P-WNITEVANAIARALNMS 509 (918)
Q Consensus 492 ----P-~D~~~lA~ai~~aL~m~ 509 (918)
+ .+.+++++++++++..+
T Consensus 419 ~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 419 KVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred ccccCcccHHHHHHHHHHHhcCc
Confidence 1 37889999999999764
No 338
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=33.70 E-value=35 Score=36.24 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=15.7
Q ss_pred hcCCeEEEEecCcccCCCC
Q 002468 569 RSNNRLLILGFNATLTEPV 587 (918)
Q Consensus 569 ~s~~rLI~lD~DGTL~~~~ 587 (918)
++.+.|++||||-|+++..
T Consensus 10 ~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cCCcEEEEEecCceeecCC
Confidence 4577899999999999763
No 339
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=33.69 E-value=65 Score=40.16 Aligned_cols=72 Identities=10% Similarity=0.149 Sum_probs=55.6
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhc
Q 002468 560 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 639 (918)
Q Consensus 560 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 639 (918)
+++..+.+.+...+.+++-+|++++.... ..-.+-|+..+++++|.+ .|.+++++||-..........
T Consensus 414 ~~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 414 LDQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHH
Confidence 34455667777778888888998875421 122366899999999987 699999999999999998888
Q ss_pred ccCc
Q 002468 640 EYNL 643 (918)
Q Consensus 640 ~l~l 643 (918)
++++
T Consensus 482 ~lGI 485 (675)
T TIGR01497 482 EAGV 485 (675)
T ss_pred HcCC
Confidence 7665
No 340
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=33.56 E-value=1.2e+02 Score=35.26 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=29.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcc
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 640 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 640 (918)
+-+.+.+.|+.|.+ .|..++|+|+.+...++..++.
T Consensus 217 l~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~ 252 (381)
T PLN02575 217 LRTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGS 252 (381)
T ss_pred cCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 34568899999886 5899999999999888777665
No 341
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=32.74 E-value=39 Score=32.95 Aligned_cols=41 Identities=20% Similarity=0.390 Sum_probs=34.6
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
..+.+.+.+.|++|.+ .+..++|+|+.+...++..+..+++
T Consensus 76 ~~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~ 116 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGL 116 (176)
T ss_dssp EEESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTH
T ss_pred cchhhhhhhhhhhccc-ccceeEEeecCCccccccccccccc
Confidence 3567789999999986 5999999999999988888887643
No 342
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=32.42 E-value=50 Score=34.79 Aligned_cols=16 Identities=19% Similarity=0.549 Sum_probs=14.3
Q ss_pred CCeEEEEecCcccCCC
Q 002468 571 NNRLLILGFNATLTEP 586 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~ 586 (918)
.+++.+||+||||+..
T Consensus 4 ~~~la~FDfDgTLt~~ 19 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQ 19 (210)
T ss_pred cCcEEEEcCCCCCccC
Confidence 4689999999999986
No 343
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=32.32 E-value=1.8e+02 Score=28.28 Aligned_cols=71 Identities=24% Similarity=0.335 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002468 361 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 440 (918)
Q Consensus 361 ~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 440 (918)
..+..+..+.+++. +..++||.|-..++.+ .+....+++.+++|..+|+ .||.++....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 55677777777653 4567789888766543 3556778888888877775 479998888887777776665
Q ss_pred c
Q 002468 441 T 441 (918)
Q Consensus 441 A 441 (918)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 344
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=32.31 E-value=1e+02 Score=28.67 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHH
Q 002468 360 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 398 (918)
Q Consensus 360 ~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~ 398 (918)
..|...++++++.+|+.+ +|.||..+..|.+.|.+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAE 83 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHH
Confidence 478888899999999864 66678877777666654
No 345
>PRK11590 hypothetical protein; Provisional
Probab=32.16 E-value=65 Score=33.70 Aligned_cols=15 Identities=20% Similarity=0.561 Sum_probs=13.4
Q ss_pred CCeEEEEecCcccCC
Q 002468 571 NNRLLILGFNATLTE 585 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~ 585 (918)
++|+++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 578999999999993
No 346
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=31.56 E-value=6.9e+02 Score=28.38 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=46.9
Q ss_pred HHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCc---hhhc------c-C-CeEEECC--CCHHHH
Q 002468 432 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA---AQSL------G-A-GAILVNP--WNITEV 498 (918)
Q Consensus 432 ~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~---~~~l------g-~-~allVnP--~D~~~l 498 (918)
+++..+|+.||++|.-+ =+.+..|+++++ .|.|+--+... .++. . . .+..+.. .+++.+
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g----~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l 315 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQ----KPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSL 315 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcC----CCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHH
Confidence 57889999999988753 256789999995 66666644321 1222 1 2 2344433 357899
Q ss_pred HHHHHHHhcCC
Q 002468 499 ANAIARALNMS 509 (918)
Q Consensus 499 A~ai~~aL~m~ 509 (918)
+++|..+++++
T Consensus 316 ~~~l~~ll~~~ 326 (352)
T PRK12446 316 IKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHcCH
Confidence 99999998754
No 347
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=31.12 E-value=4.8e+02 Score=27.88 Aligned_cols=38 Identities=34% Similarity=0.386 Sum_probs=25.5
Q ss_pred ceEEEeCCCCchhhccCC----eEEECCCCHHHHHHHHHHHh
Q 002468 469 GVLILSEFAGAAQSLGAG----AILVNPWNITEVANAIARAL 506 (918)
Q Consensus 469 g~lIlSe~aG~~~~lg~~----allVnP~D~~~lA~ai~~aL 506 (918)
.|+|.-|-+|++--+|.+ .+=|+|.+-.++|.||+--+
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM 227 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM 227 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH
Confidence 577777766665555333 35578887778999988544
No 348
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=30.92 E-value=1.4e+02 Score=30.53 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=26.6
Q ss_pred HHHHHhCCEEeEeCHHHHHHHHHHHHHHhc
Q 002468 263 LRAVLAADLVGFHTYDYARHFVSACTRILG 292 (918)
Q Consensus 263 l~~ll~aDlIgf~t~~~~~~Fl~~~~r~lg 292 (918)
+-+-|.||.|.|.+.-..+.|++.+..++.
T Consensus 114 i~saLaAD~v~FNS~~nr~sFL~~~~~fL~ 143 (168)
T PF12038_consen 114 IYSALAADRVVFNSAFNRDSFLDGIPSFLK 143 (168)
T ss_pred HHHHHhceeeeecchhhHHHHHHHHHHHHH
Confidence 456789999999999999999999998876
No 349
>PLN02645 phosphoglycolate phosphatase
Probab=29.99 E-value=1.3e+02 Score=33.54 Aligned_cols=36 Identities=8% Similarity=-0.119 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
+-..++.+++.++ .+++.+++||| .. +|+.+=+.++
T Consensus 232 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG 268 (311)
T PLN02645 232 STFMMDYLANKFG------IEKSQICMVGD-RLDTDILFGQNGG 268 (311)
T ss_pred hHHHHHHHHHHcC------CCcccEEEEcC-CcHHHHHHHHHcC
Confidence 3446677788877 56889999999 86 8987766664
No 350
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=29.66 E-value=1.2e+02 Score=36.00 Aligned_cols=35 Identities=17% Similarity=0.060 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|-..+..+++.++ ++.+++||| ..+|..+-+.++-
T Consensus 387 kP~~~~~al~~l~--------~~~~v~VGD-s~~Di~aAk~AG~ 421 (459)
T PRK06698 387 KSDLVKSILNKYD--------IKEAAVVGD-RLSDINAAKDNGL 421 (459)
T ss_pred CcHHHHHHHHhcC--------cceEEEEeC-CHHHHHHHHHCCC
Confidence 5567777777654 578999999 9999888777743
No 351
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=29.34 E-value=1.9e+02 Score=37.54 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=32.8
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
|-++++++|+.|.+ .|++|+++||-........-.+++
T Consensus 548 pr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 548 PREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred CCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcC
Confidence 45789999999886 799999999999999988877755
No 352
>PRK09449 dUMP phosphatase; Provisional
Probab=29.04 E-value=1.8e+02 Score=30.36 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=14.3
Q ss_pred ccceecCCHHHHHHHHH
Q 002468 886 NARFLLQSSDEVVSFLK 902 (918)
Q Consensus 886 ~A~y~l~~~~eV~~~L~ 902 (918)
.|.|.+++..|+.++|+
T Consensus 207 ~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 207 APTYQVSSLSELEQLLC 223 (224)
T ss_pred CCeEEECCHHHHHHHHh
Confidence 47899999999988775
No 353
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=29.01 E-value=39 Score=35.23 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=30.4
Q ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 746 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 746 ~gvnKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
.+--|+.+|..+.+ + .+...++++|| +.||.+|..-+..
T Consensus 156 dsggKa~~i~~lrk--~------~~~~~~~mvGD-GatDlea~~pa~a 194 (227)
T KOG1615|consen 156 DSGGKAEVIALLRK--N------YNYKTIVMVGD-GATDLEAMPPADA 194 (227)
T ss_pred cCCccHHHHHHHHh--C------CChheeEEecC-CccccccCCchhh
Confidence 34479999998877 3 35788999999 9999988765443
No 354
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=28.36 E-value=45 Score=37.29 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=27.1
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCC
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT 621 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~ 621 (918)
.--|+||+||.|+-- ..+-++..++|+.|..+.|+
T Consensus 35 ~fgfafDIDGVL~RG---------------~~~i~~~~~Alr~L~~~~g~ 69 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRG---------------HRPIPGALKALRRLVDNQGQ 69 (389)
T ss_pred ceeEEEecccEEEec---------------CCCCcchHHHHHHHHhcCCC
Confidence 346999999999853 34567889999999976444
No 355
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=28.30 E-value=1.2e+02 Score=32.09 Aligned_cols=16 Identities=19% Similarity=0.356 Sum_probs=14.1
Q ss_pred CCeEEEEecCcccCCC
Q 002468 571 NNRLLILGFNATLTEP 586 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~ 586 (918)
+.|+|+||+||||++.
T Consensus 9 ~~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 9 DVDTVLLDMDGTLLDL 24 (224)
T ss_pred cCCEEEEcCCCCccch
Confidence 3688999999999985
No 356
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=28.18 E-value=7.1e+02 Score=28.69 Aligned_cols=144 Identities=15% Similarity=0.179 Sum_probs=89.8
Q ss_pred cCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHHhhhc-ccCCCCcccEEEeCCCCCHHH
Q 002468 356 IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR-TDVPEYQRLTSQVHEIVGRING-RFGTLTAVPIHHLDRSLDFPA 433 (918)
Q Consensus 356 ~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr-~~~~~y~~l~~~l~~lv~~IN~-~~g~~~~~pV~~~~g~v~~~e 433 (918)
.|.-..=+.+.+.+-+..|+. +..+.|++.-. .+-+++ ..++++++. +.|. ..|.|..+..+
T Consensus 202 vK~~~~PmLi~E~aYR~~P~~---v~~~~V~Nt~~~ke~~~F-------~~f~~~ldlvr~gk------asfegR~~~p~ 265 (364)
T PF10933_consen 202 VKTCFIPMLICEEAYRADPDA---VEHVYVTNTYHLKEHPTF-------VNFANSLDLVRDGK------ASFEGRFDFPD 265 (364)
T ss_pred EeecCccHHHHHHHHHhChhh---cceEEEecchhhhcCHHH-------HHHHHhhHHhhcCe------eEEeeecChHH
Confidence 344344455667777788886 44555554221 112222 233334332 2232 23566666666
Q ss_pred HHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHH
Q 002468 434 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEER 513 (918)
Q Consensus 434 l~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG~~~~lg~~allVnP~D~~~lA~ai~~aL~m~~~er 513 (918)
..+=| +|+.|.-=.--|+|...+|++-- +=|||- -++.|++-|+.-+-+|..+=|+++.+|+...+..-
T Consensus 266 fla~~--tD~VvSHqWeN~lNYlY~daLyg----gYPLVH-----NS~~l~d~GYYY~~fD~~~G~r~L~~A~~~HD~~~ 334 (364)
T PF10933_consen 266 FLAQH--TDAVVSHQWENPLNYLYYDALYG----GYPLVH-----NSPLLKDVGYYYPDFDAFEGARQLLRAIREHDADL 334 (364)
T ss_pred HHHhC--CCEEEeccccchhhHHHHHHHhc----CCCccc-----CcchhcccCcCCCCccHHHHHHHHHHHHHHccccH
Confidence 66644 69988777778999999999885 247774 24455677888888999999999999998766544
Q ss_pred HHHHHHHHHHHHh
Q 002468 514 EKRHWHNFTHVTT 526 (918)
Q Consensus 514 ~~r~~~~~~~v~~ 526 (918)
..-.++.++.+.+
T Consensus 335 ~~Y~~ra~~~l~~ 347 (364)
T PF10933_consen 335 DAYRARARRLLDR 347 (364)
T ss_pred HHHHHHHHHHHHh
Confidence 4444444554443
No 357
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=28.16 E-value=67 Score=33.15 Aligned_cols=40 Identities=13% Similarity=0.193 Sum_probs=33.5
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.+.+.+.|+.|.+ .|..++|+||.+...+...++.+++
T Consensus 75 ~~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 75 EVFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCC
Confidence 456789999999987 5899999999999988888877654
No 358
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=27.42 E-value=65 Score=34.78 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=46.9
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccc---------------cccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh-
Q 002468 570 SNNRLLILGFNATLTEPVDTPGRRGDQIR---------------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV- 633 (918)
Q Consensus 570 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~---------------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~- 633 (918)
-+.+.+++|+|-|+++..+..+ -|+. +-.+++-|...+-|+=.-+ .|..|+-+|-|..+.
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqg---y~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~~ 152 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQG---YQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQENE 152 (274)
T ss_pred CCCceEEEecchHhhcCccccc---hhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhcc
Confidence 4567999999999998753322 2221 1234566788888888665 699999999998877
Q ss_pred HHHHhccc
Q 002468 634 LDKNFQEY 641 (918)
Q Consensus 634 L~~~~~~l 641 (918)
....+..+
T Consensus 153 ~~~T~~nL 160 (274)
T COG2503 153 KDGTIENL 160 (274)
T ss_pred cchhHHHH
Confidence 54444443
No 359
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=27.24 E-value=1.1e+02 Score=32.15 Aligned_cols=74 Identities=15% Similarity=0.273 Sum_probs=44.0
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc--CceEEeeCceEEEecCCeeeeeccccCChHHH-HHHHHHH
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV-DSLKHVF 680 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l--~l~liaenGa~i~~~~~~w~~~~~~~~~~~w~-~~v~~il 680 (918)
=.+.+++..+.-.+++.+..++.|||.-......+..+ .-++ ..|...+++.++.+..+ +.++ .-+..++
T Consensus 55 WNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L-~Fd~v~LKp~~~~~~sT------m~fK~~~l~~ll 127 (197)
T PF10307_consen 55 WNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGL-EFDAVCLKPENQRFSST------MDFKQAFLEDLL 127 (197)
T ss_pred hhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCC-CccEEEeCcccccCccc------cHHHHHHHHHHH
Confidence 35567777777777888888899999975555555543 1111 24555555443343332 2445 3456677
Q ss_pred HHHH
Q 002468 681 EYFT 684 (918)
Q Consensus 681 ~~~~ 684 (918)
+.|.
T Consensus 128 ~~Y~ 131 (197)
T PF10307_consen 128 HTYK 131 (197)
T ss_pred HhcC
Confidence 7664
No 360
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=27.13 E-value=70 Score=32.96 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=33.5
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+-|.+.+.|+.|.+ .|.+++|+|+.+...++.++..+++
T Consensus 85 ~~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 124 (213)
T TIGR01449 85 SVFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGL 124 (213)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCc
Confidence 355678999999986 5899999999999999988887654
No 361
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=27.06 E-value=8.9e+02 Score=27.07 Aligned_cols=262 Identities=16% Similarity=0.150 Sum_probs=124.1
Q ss_pred HHHHhhcCCCCEEEEeCCccchH--------HHHHHhhCCCCeEEEEEcCCCCChhhhhcCCChHHHHHHHHhCCEEeEe
Q 002468 204 DVVNKHYKDGDVVWCHDYHLMFL--------PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFH 275 (918)
Q Consensus 204 ~~i~~~~~~~DiIwvHDyhL~ll--------p~~lr~~~~~~~I~~flH~PfPs~e~fr~lP~~~~ll~~ll~aDlIgf~ 275 (918)
+.+++.+.+.|++.++.|..--+ -.+|+...|..+++.|.|- -+.-..+..|. |...|-.+|.|--|
T Consensus 53 de~v~~vN~yDI~m~nSvPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hd--h~~lsI~rn~~---le~~m~~~DvIfsh 127 (355)
T PF11440_consen 53 DETVKKVNDYDIVMFNSVPATKVQEAIINNYEKIIKKIKPSIKVVGFMHD--HNKLSIDRNPY---LEGTMNEMDVIFSH 127 (355)
T ss_dssp HHHHHHHTSSSEEEEEE--BTTS-HHHHHHHHHHHHCS-TTSEEEEEE-----SHHHHTTBSS---HHHHHHH-SEEEES
T ss_pred HHHHHHhhccCEEEEecccCchHHHHHHHHHHHHHHhccccceeEEEeec--cceeecccccc---HHHHHHhhcEEEec
Confidence 77788888999999999887533 3445555678887777883 23444555565 44556678988644
Q ss_pred CHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeeCCcChhhhhhhhcCCchHHHHHHHHHHh-c--CCeEE---EE
Q 002468 276 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-A--GRKVM---LG 349 (918)
Q Consensus 276 t~~~~~~Fl~~~~r~lg~~~~~~~i~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~--~~~vI---l~ 349 (918)
. .-.+|.+.....+-.+ .+....+..++..+-+ |++.. -+...|..| . .++.+ ++
T Consensus 128 s--~~g~f~kv~m~~l~Ps----~~~l~~~i~~~p~v~n------fqpp~-------~i~~~Rstywkd~se~nmnv~~y 188 (355)
T PF11440_consen 128 S--DNGWFSKVLMKELLPS----KVSLFDRIKKFPMVFN------FQPPM-------DINKYRSTYWKDVSEKNMNVNRY 188 (355)
T ss_dssp ---TTSHHHHTHHHHHS-S----S--SSS-------EEE----------B--------HHHHHHHH---GGGSEEEEEEE
T ss_pred c--ccchHHHHHHHhhccc----cCchhhhhhhcceeee------cCCcc-------cHHHHHHHHhhhhHhhhccccee
Confidence 3 3356776555333222 1222222222222221 22211 122333434 1 22333 79
Q ss_pred EecccccCCHHHHHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCC--------CCccc
Q 002468 350 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT--------LTAVP 421 (918)
Q Consensus 350 VdRLd~~KGi~~~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~--------~~~~p 421 (918)
+||..-.||..+.|.--+++|+. |++ .-++-|.- |+ ++.-...+. --.+| -+++ ....|
T Consensus 189 igR~Tt~kG~~~mfD~h~~~lK~-~~~----~t~~~Gie-rS--~A~~~i~d~----~~~~~-y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 189 IGRQTTWKGPRRMFDLHEKILKP-AGF----KTIMEGIE-RS--PAKISIKDH----GIPYE-YYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp E--SSGGG-HHHHHHHHHHTTTT-TT-----EEEEE----SS--THHHHHHHT----T--EE-EE-CTGGGG---SSS--
T ss_pred eeeeeeecCcHHHhhhHHHhcCC-cch----hHHhhhhh-cC--CceeeeecC----Ccccc-cCccccccCcccCCCCc
Confidence 99999999999999988888775 654 23433431 12 332222211 00000 0111 11234
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCC------CccCChhHHHHHHhcCCCCceEEEeCCCCc-hh-hc--------cC
Q 002468 422 IHHLDRSLDFPALCALYAVTDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGA-AQ-SL--------GA 485 (918)
Q Consensus 422 V~~~~g~v~~~el~aly~~ADv~vv~Sl------~EG~nLv~lEamA~~~~~~g~lIlSe~aG~-~~-~l--------g~ 485 (918)
+..+ |..=.+|....++.+-..+--|- -+.|-.+-+|-.||+ ..+|-=...|- .. .| ..
T Consensus 256 ~~v~-~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~G----tIPVF~k~~GEN~r~~~D~~~~~~~~~ 330 (355)
T PF11440_consen 256 VPVY-GPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVG----TIPVFDKSWGENNRFTLDGTRYIDHPY 330 (355)
T ss_dssp EEEE-SS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCT----SEEEEEHHHHHHSB-TTTSSBGGSS--
T ss_pred ceec-chhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeec----eeeeeeccccccceeeecCceeeccCc
Confidence 5544 44445666666666655543332 255888999999995 44443222221 11 11 24
Q ss_pred CeEEECCCCHHHHHHHHHHHhc
Q 002468 486 GAILVNPWNITEVANAIARALN 507 (918)
Q Consensus 486 ~allVnP~D~~~lA~ai~~aL~ 507 (918)
+++.++-.|.++..+.|.++-+
T Consensus 331 ~~I~~De~dle~T~ekl~E~a~ 352 (355)
T PF11440_consen 331 SAIYFDENDLESTVEKLIEVAN 352 (355)
T ss_dssp S-EEE-TTSHHHHHHHHHHHHT
T ss_pred ceeEeccchHHHHHHHHHHHhc
Confidence 6899999999999998887654
No 362
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=26.97 E-value=2.5e+02 Score=27.60 Aligned_cols=70 Identities=24% Similarity=0.317 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhCcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002468 362 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 441 (918)
Q Consensus 362 ~L~Af~~ll~~~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 441 (918)
.+..+..+.++++ +..++||.|...++.+ .+....+++.+.++..+|+ .||+++....+-.+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3556666666652 5677889887655533 3456677777777776664 4799998888877776666554
No 363
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=26.96 E-value=1.4e+02 Score=30.95 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=13.0
Q ss_pred eEEEEecCcccCCC
Q 002468 573 RLLILGFNATLTEP 586 (918)
Q Consensus 573 rLI~lD~DGTL~~~ 586 (918)
++|+||+||||++.
T Consensus 2 k~iiFD~DGTL~ds 15 (220)
T TIGR03351 2 SLVVLDMAGTTVDE 15 (220)
T ss_pred cEEEEecCCCeecc
Confidence 68999999999987
No 364
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=26.96 E-value=3.8e+02 Score=27.56 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=50.3
Q ss_pred CHHHHHHHHH--HccEEEECCCCcc----CChhHHHHHHhcCCCCceEEEeCCCCchhh---c--cCCeEEECCCCHHHH
Q 002468 430 DFPALCALYA--VTDVALVTSLRDG----MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEV 498 (918)
Q Consensus 430 ~~~el~aly~--~ADv~vv~Sl~EG----~nLv~lEamA~~~~~~g~lIlSe~aG~~~~---l--g~~allVnP~D~~~l 498 (918)
+.++....+. ..|++++-....+ -|+-.++.+........++++|........ + |..|++.-|.+++++
T Consensus 37 ~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l 116 (216)
T PRK10840 37 DSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 (216)
T ss_pred CHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 4455555544 3688887643333 466666666533222346677766543321 2 677899999999999
Q ss_pred HHHHHHHhc
Q 002468 499 ANAIARALN 507 (918)
Q Consensus 499 A~ai~~aL~ 507 (918)
.++|..++.
T Consensus 117 ~~ai~~v~~ 125 (216)
T PRK10840 117 PKALAALQK 125 (216)
T ss_pred HHHHHHHHC
Confidence 999998875
No 365
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=26.90 E-value=32 Score=45.26 Aligned_cols=31 Identities=6% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHh
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 615 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L 615 (918)
+.+.++||+||||++. .........+++++.
T Consensus 74 ~ikaVIFDlDGTLiDS--------------~~~~~~a~~~~~~~~ 104 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNS--------------EEPSRRAAVDVFAEM 104 (1057)
T ss_pred CCCEEEECCCCCeEeC--------------hHHHHHHHHHHHHHc
No 366
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=26.80 E-value=72 Score=30.36 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHh-CcCCCCCCCCceEEEEecCC-CCcHHHHHHcC
Q 002468 749 TKGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFE 792 (918)
Q Consensus 749 nKG~ai~~Ll~~l-~~~~~~~~~~d~vlaiGD~d-~nDedMf~~~~ 792 (918)
.|..+++.+++.+ + .+++.+++||| . .+|..+=+.++
T Consensus 86 P~~~~~~~~~~~~~~------~~~~~~v~IGD-~~~~Di~~A~~~G 124 (132)
T TIGR01662 86 PKPGMFLEALKRFNE------IDPEESVYVGD-QDLTDLQAAKRAG 124 (132)
T ss_pred CChHHHHHHHHHcCC------CChhheEEEcC-CCcccHHHHHHCC
Confidence 3678889999998 5 56899999999 5 78887776664
No 367
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=26.79 E-value=8.8e+02 Score=26.66 Aligned_cols=24 Identities=17% Similarity=0.209 Sum_probs=20.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECC
Q 002468 425 LDRSLDFPALCALYAVTDVALVTS 448 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~S 448 (918)
+.|..+-.|+.++++.||++|-+-
T Consensus 239 l~g~~sL~el~ali~~a~l~I~~D 262 (319)
T TIGR02193 239 VLPKMSLAEVAALLAGADAVVGVD 262 (319)
T ss_pred ecCCCCHHHHHHHHHcCCEEEeCC
Confidence 457889999999999999999764
No 368
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=26.68 E-value=49 Score=33.39 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcCc
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 793 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~~ 793 (918)
|-..+..+++.++ ++++.+++||| ..+|.++-+.++-
T Consensus 105 ~~~~~~~~~~~~~------~~~~e~l~IGD-~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKNL------IDKARSYVIGD-RETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHCCC
Confidence 4567888888887 57899999999 9999988877754
No 369
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=26.49 E-value=8e+02 Score=27.00 Aligned_cols=21 Identities=24% Similarity=0.434 Sum_probs=16.3
Q ss_pred HHHHHhhcCCCCEEEEeCCcc
Q 002468 203 ADVVNKHYKDGDVVWCHDYHL 223 (918)
Q Consensus 203 a~~i~~~~~~~DiIwvHDyhL 223 (918)
.++|.+..+.-|+|-|-.||-
T Consensus 56 r~~i~~~ak~a~VitISHYHY 76 (304)
T COG2248 56 REKIQRYAKKADVITISHYHY 76 (304)
T ss_pred HHHHHHHHhhCCEEEEeeecc
Confidence 366777777889999988874
No 370
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.27 E-value=76 Score=35.31 Aligned_cols=55 Identities=15% Similarity=0.215 Sum_probs=38.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhccc
Q 002468 571 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 641 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l 641 (918)
+.-.|+||-||.|..- . .+-|.+.++|..|.+. |..++++|-.+....+.+++.+
T Consensus 21 ~~DtfifDcDGVlW~g-~--------------~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLG-E--------------KPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hcCEEEEcCCcceeec-C--------------CCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHH
Confidence 3457999999999873 2 2335677777777764 6778888877777666666544
No 371
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=25.43 E-value=1e+03 Score=28.60 Aligned_cols=76 Identities=8% Similarity=0.052 Sum_probs=48.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCCC----chhhc-c-CCeEEECC--CCHH
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNP--WNIT 496 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~aG----~~~~l-g-~~allVnP--~D~~ 496 (918)
+.+.+++.++.+- ..+++||- .-|+| ...||+.++ .|+|+--..+ -+..+ . ..|+.+++ .+.+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~G----vP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDAL----VPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcC----CCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 5678888765543 56788873 45644 578999994 5665543332 11212 1 23566665 4678
Q ss_pred HHHHHHHHHhcCC
Q 002468 497 EVANAIARALNMS 509 (918)
Q Consensus 497 ~lA~ai~~aL~m~ 509 (918)
++++||.++|+.+
T Consensus 421 ~l~~ai~~vl~~~ 433 (507)
T PHA03392 421 QLVLAIVDVIENP 433 (507)
T ss_pred HHHHHHHHHhCCH
Confidence 9999999999864
No 372
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=25.01 E-value=1.2e+02 Score=30.71 Aligned_cols=36 Identities=11% Similarity=0.017 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
+-..+..++++++ .+++.+++||| ..+|.++=+.++
T Consensus 108 ~p~~~~~a~~~~~------~~~~~~v~VGD-s~~Di~aA~~aG 143 (176)
T TIGR00213 108 KPGMLLQARKELH------IDMAQSYMVGD-KLEDMQAGVAAK 143 (176)
T ss_pred CHHHHHHHHHHcC------cChhhEEEEcC-CHHHHHHHHHCC
Confidence 4566788888887 57899999999 888877766664
No 373
>PRK14057 epimerase; Provisional
Probab=25.01 E-value=4.7e+02 Score=28.63 Aligned_cols=67 Identities=21% Similarity=0.168 Sum_probs=41.8
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH-ccEEEECCC
Q 002468 379 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV-TDVALVTSL 449 (918)
Q Consensus 379 kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~-ADv~vv~Sl 449 (918)
..+||+-..|+.++..-.....+.++++-+.+..+ | +.-.+...|.++.+.+..+..+ ||++|.-|.
T Consensus 156 D~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~-~---~~~~IeVDGGI~~~ti~~l~~aGad~~V~GSa 223 (254)
T PRK14057 156 EVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK-R---EGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSA 223 (254)
T ss_pred CEEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc-C---CCceEEEECCCCHHHHHHHHHCCCCEEEEChH
Confidence 36788888888765433334445555554444322 2 1112346899999988887754 899998764
No 374
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=24.69 E-value=71 Score=35.36 Aligned_cols=61 Identities=20% Similarity=0.076 Sum_probs=38.2
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcc---cccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQ---IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 633 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~---~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 633 (918)
+-.|+.|||-||+......|.+... +-+....++++.++-+++|-. .-..+=+-+..+.++
T Consensus 22 ~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~-~Y~PiE~d~~~~~~e 85 (277)
T TIGR01544 22 KLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKE-KYYPIEVDPVLTVEE 85 (277)
T ss_pred heEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHh-hccceecCCCCChHH
Confidence 3459999999999875323322211 122345678888888888885 344555555666554
No 375
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=24.34 E-value=1.7e+02 Score=31.47 Aligned_cols=60 Identities=12% Similarity=0.146 Sum_probs=0.0
Q ss_pred CchHHHHHHHHhcC-CeEEEEec--CcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcC--CChh
Q 002468 558 LREADSIERYLRSN-NRLLILGF--NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG--SDRN 632 (918)
Q Consensus 558 l~~~~~~~~y~~s~-~rLI~lD~--DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG--R~~~ 632 (918)
.+..++++.+.... ..+|++|+ |||+-.. ..+.++++++ .-..-++++| |+.+
T Consensus 148 ~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G~---------------------~~~li~~l~~-~~~ipvi~~GGi~s~e 205 (234)
T PRK13587 148 LNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGP---------------------NFELTGQLVK-ATTIPVIASGGIRHQQ 205 (234)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCcCCCCcc---------------------CHHHHHHHHH-hCCCCEEEeCCCCCHH
Q ss_pred hHHHHhc
Q 002468 633 VLDKNFQ 639 (918)
Q Consensus 633 ~L~~~~~ 639 (918)
++.+.+.
T Consensus 206 di~~l~~ 212 (234)
T PRK13587 206 DIQRLAS 212 (234)
T ss_pred HHHHHHH
No 376
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=24.21 E-value=1.9e+02 Score=29.64 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhcCCCceeeeccceEEEEeeccChhhhHHHHHHHHHHHhcCC-CCCCCeEEEEcCcEEEEEeCCCCHHH
Q 002468 674 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP-ISNASVEVVQGSKSVEVRAVGVTKGA 752 (918)
Q Consensus 674 ~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~-~~~~~l~v~~G~~~vEI~p~gvnKG~ 752 (918)
..+..+++...+ +++.++.--|...|+. |+++++.| .-. ...........-..+||.|. +|-.
T Consensus 48 pdv~~iL~~L~~---------~gv~lavASRt~~P~~----A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g--sK~~ 111 (169)
T PF12689_consen 48 PDVPEILQELKE---------RGVKLAVASRTDEPDW----ARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG--SKTT 111 (169)
T ss_dssp TTHHHHHHHHHH---------CT--EEEEE--S-HHH----HHHHHHHT-T-C----------CCECEEEESSS---HHH
T ss_pred cCHHHHHHHHHH---------CCCEEEEEECCCChHH----HHHHHHhc-CCCccccccccchhhcchhheecC--chHH
Confidence 345556655543 3444555555444554 56677766 221 01111222233346899885 9999
Q ss_pred HHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHH
Q 002468 753 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 786 (918)
Q Consensus 753 ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDed 786 (918)
=.++|.+..| ++++.+|+|=|+..|.++
T Consensus 112 Hf~~i~~~tg------I~y~eMlFFDDe~~N~~~ 139 (169)
T PF12689_consen 112 HFRRIHRKTG------IPYEEMLFFDDESRNIEV 139 (169)
T ss_dssp HHHHHHHHH---------GGGEEEEES-HHHHHH
T ss_pred HHHHHHHhcC------CChhHEEEecCchhccee
Confidence 9999999988 789999999995555444
No 377
>PRK11587 putative phosphatase; Provisional
Probab=24.21 E-value=1.8e+02 Score=30.38 Aligned_cols=16 Identities=13% Similarity=0.376 Sum_probs=14.1
Q ss_pred CCeEEEEecCcccCCC
Q 002468 571 NNRLLILGFNATLTEP 586 (918)
Q Consensus 571 ~~rLI~lD~DGTL~~~ 586 (918)
+.+.|+||+||||++.
T Consensus 2 ~~k~viFDlDGTL~Ds 17 (218)
T PRK11587 2 RCKGFLFDLDGTLVDS 17 (218)
T ss_pred CCCEEEEcCCCCcCcC
Confidence 3578999999999997
No 378
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=23.81 E-value=8.5e+02 Score=28.01 Aligned_cols=49 Identities=22% Similarity=0.224 Sum_probs=38.2
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEeCCC
Q 002468 425 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 477 (918)
Q Consensus 425 ~~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlSe~a 477 (918)
++.-.+.+++..+...+|++-++| ++=.|...+++++.. +.|++++..-
T Consensus 169 ~tev~d~~~v~~~~~~~d~lqIga-~~~~n~~LL~~va~t---~kPVllk~G~ 217 (352)
T PRK13396 169 ITEVMDAADLEKIAEVADVIQVGA-RNMQNFSLLKKVGAQ---DKPVLLKRGM 217 (352)
T ss_pred EEeeCCHHHHHHHHhhCCeEEECc-ccccCHHHHHHHHcc---CCeEEEeCCC
Confidence 455567777777777799999998 588889999999864 5688888743
No 379
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=23.34 E-value=68 Score=31.23 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHcC
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 792 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~~ 792 (918)
.+..+.+.+++.++ ++++.+++||| ...|..+-+.++
T Consensus 134 p~~~~~~~~~~~~~------~~p~~~~~vgD-~~~d~~~A~~~G 170 (176)
T PF13419_consen 134 PDPDAYRRALEKLG------IPPEEILFVGD-SPSDVEAAKEAG 170 (176)
T ss_dssp TSHHHHHHHHHHHT------SSGGGEEEEES-SHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHHHHHcC
Confidence 34578999999998 67899999999 888888777664
No 380
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=23.15 E-value=64 Score=31.63 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHHc
Q 002468 749 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 791 (918)
Q Consensus 749 nKG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~~ 791 (918)
-|...++.+++.++ .+++++++||| +..|..+=+.+
T Consensus 102 P~~~~~~~~~~~~~------~~~~e~i~IGD-s~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLG------VDASRSLVVGD-RLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcC------CChHHEEEEcC-CHHHHHHHHHC
Confidence 46678889999988 57899999999 76665554444
No 381
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=23.13 E-value=1.4e+02 Score=37.38 Aligned_cols=71 Identities=11% Similarity=0.182 Sum_probs=54.7
Q ss_pred HHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcc
Q 002468 561 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 640 (918)
Q Consensus 561 ~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 640 (918)
....+.+.+...+.+++-+|++++.... ..-.+-+++++++++|.+ .|.+++++||-..........+
T Consensus 414 ~~~~~~~a~~G~~~l~va~~~~~lG~i~-----------l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 414 DAAVDEVARKGGTPLVVAEDNRVLGVIY-----------LKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHHhCCCcEEEEEECCeEEEEEE-----------EeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHH
Confidence 3445566667778888888999875421 122356899999999986 6999999999999999988888
Q ss_pred cCc
Q 002468 641 YNL 643 (918)
Q Consensus 641 l~l 643 (918)
+++
T Consensus 482 lGI 484 (679)
T PRK01122 482 AGV 484 (679)
T ss_pred cCC
Confidence 765
No 382
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=23.09 E-value=95 Score=32.49 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.3
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
.+-|.+.+.|+.|.+ .|..++|+||.....++..++.++
T Consensus 92 ~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 130 (222)
T PRK10826 92 PLLPGVREALALCKA-QGLKIGLASASPLHMLEAVLTMFD 130 (222)
T ss_pred CCCCCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHhCc
Confidence 356789999999987 599999999999998888887764
No 383
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=23.07 E-value=2.4e+02 Score=30.57 Aligned_cols=36 Identities=11% Similarity=-0.109 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCC-CcHHHHHHcC
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 792 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~-nDedMf~~~~ 792 (918)
+-...+.+++.++ .+++.+++||| +. +|..+=+.++
T Consensus 181 ~p~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~~G 217 (257)
T TIGR01458 181 SKTFFLEALRATG------CEPEEAVMIGD-DCRDDVGGAQDCG 217 (257)
T ss_pred CHHHHHHHHHHhC------CChhhEEEECC-CcHHHHHHHHHcC
Confidence 3456777888877 56899999999 85 8877766554
No 384
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=22.96 E-value=96 Score=32.19 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=33.2
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+-|.+.++|+.|.+ .|..++|+||.....+...+..+++
T Consensus 82 ~~~~g~~~~l~~L~~-~g~~~~i~S~~~~~~~~~~l~~~gl 121 (214)
T PRK13288 82 TEYETVYETLKTLKK-QGYKLGIVTTKMRDTVEMGLKLTGL 121 (214)
T ss_pred ccCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 355788999999987 5899999999999998888877643
No 385
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=22.91 E-value=1.3e+02 Score=29.36 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=45.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCCChhh-HHHHhccc
Q 002468 572 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV-LDKNFQEY 641 (918)
Q Consensus 572 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~-L~~~~~~l 641 (918)
.+++-+|+|+|+-|....++.-+ +....-+.....|..|.+ .|.+.+++|--.-.. +.+.+..+
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g-----~e~~fY~Di~rIL~dLk~-~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKG-----EEMIFYDDIRRILVDLKK-LGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred eEEEEecccccccccccCcccCc-----ceeeeccchhHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHh
Confidence 36888999999999877664211 344567788899999996 699999998665444 34444444
No 386
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=22.90 E-value=1.1e+02 Score=31.94 Aligned_cols=43 Identities=16% Similarity=0.288 Sum_probs=36.7
Q ss_pred ccCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCceE
Q 002468 602 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 645 (918)
Q Consensus 602 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l~l 645 (918)
.+++|.+++....|.+ .+.+|+++||-=+..+...-+++++.+
T Consensus 87 ~~lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred CccCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 4678899999999998 699999999998888888877776654
No 387
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=22.85 E-value=1e+02 Score=31.66 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=29.8
Q ss_pred hHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 607 DLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 607 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
...++|+.|.+ .|..++|+||.+...++..+..+++
T Consensus 110 ~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl 145 (197)
T TIGR01548 110 TPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGL 145 (197)
T ss_pred CHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCc
Confidence 34788888876 5899999999999999988887654
No 388
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=22.65 E-value=5.8e+02 Score=27.43 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=39.6
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHH-HccEEEECC
Q 002468 379 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA-VTDVALVTS 448 (918)
Q Consensus 379 kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~-~ADv~vv~S 448 (918)
..+||+-..|+.++..-.....+.+.++-+.++.+ + +.......|.++.+.+..+.. .||++|+-|
T Consensus 132 D~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~-~---~~~~IeVDGGI~~~~i~~~~~aGad~~V~Gs 198 (229)
T PRK09722 132 DKITVMTVDPGFAGQPFIPEMLDKIAELKALRERN-G---LEYLIEVDGSCNQKTYEKLMEAGADVFIVGT 198 (229)
T ss_pred CEEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhc-C---CCeEEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 36788888887665433334444555554444321 2 112234689999888877764 489988763
No 389
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=22.25 E-value=85 Score=30.54 Aligned_cols=33 Identities=15% Similarity=-0.029 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCcCCCCCCCCceEEEEecCCCCcHHHHHH
Q 002468 750 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 790 (918)
Q Consensus 750 KG~ai~~Ll~~l~~~~~~~~~~d~vlaiGD~d~nDedMf~~ 790 (918)
+...+.+++++++ .++ .+++||| +..|..+=+.
T Consensus 120 ~~~~~~~~~~~~~------~~~-~~l~iGD-s~~Di~aa~~ 152 (154)
T TIGR01549 120 EPEIFLAALESLG------LPP-EVLHVGD-NLNDIEGARN 152 (154)
T ss_pred CHHHHHHHHHHcC------CCC-CEEEEeC-CHHHHHHHHH
Confidence 5788999999988 456 8999999 8888766444
No 390
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=22.05 E-value=1.6e+02 Score=38.60 Aligned_cols=39 Identities=3% Similarity=0.049 Sum_probs=34.2
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
.+-+++.++|++|.+ .|..|+++|||+...+......++
T Consensus 568 plr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 568 PPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred CChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 467899999999987 699999999999999988888754
No 391
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=21.43 E-value=1.1e+02 Score=32.32 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=33.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccC
Q 002468 604 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 642 (918)
Q Consensus 604 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~ 642 (918)
+-|.+.++|.+|.+ .|..++|+|+++...++..+..++
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~g 127 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALG 127 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhC
Confidence 44678899999997 689999999999999999999864
No 392
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=21.19 E-value=6.1e+02 Score=27.29 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=40.3
Q ss_pred cEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHH-ccEEEECCC
Q 002468 379 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV-TDVALVTSL 449 (918)
Q Consensus 379 kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~-ADv~vv~Sl 449 (918)
..+||+-..|+.++..-.....+.++++-+.+..+ + +.-.+...|.++.+.+..+..+ ||++|.-|.
T Consensus 142 D~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~-~---~~~~IeVDGGI~~~ti~~l~~aGaD~~V~GSa 209 (228)
T PRK08091 142 DLIQILTLDPRTGTKAPSDLILDRVIQVENRLGNR-R---VEKLISIDGSMTLELASYLKQHQIDWVVSGSA 209 (228)
T ss_pred CEEEEEEECCCCCCccccHHHHHHHHHHHHHHHhc-C---CCceEEEECCCCHHHHHHHHHCCCCEEEEChh
Confidence 36788878887664332233444555554444321 2 1122346899999988877654 899988764
No 393
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=20.74 E-value=4.5e+02 Score=31.78 Aligned_cols=102 Identities=21% Similarity=0.185 Sum_probs=69.1
Q ss_pred eEEEEEecccccCCHHHHHHHHHHHHHh-CcCccCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHhhhcccCCCCcccEE
Q 002468 345 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 423 (918)
Q Consensus 345 ~vIl~VdRLd~~KGi~~~L~Af~~ll~~-~P~~~~kv~Lvqig~psr~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 423 (918)
+=++++.|.---|-+..+|=|+..+... ...-+++--.+.|-.|+| +|..|+.+.+..+-...+ . ..+
T Consensus 129 rD~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PTR-------ELA~QV~~~~~~~~~~~~---~-~~~ 197 (519)
T KOG0331|consen 129 RDLVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPTR-------ELAVQVQAEAREFGKSLR---L-RST 197 (519)
T ss_pred CceEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCcH-------HHHHHHHHHHHHHcCCCC---c-cEE
Confidence 3477889999999999999999998863 322233222233345764 677888777777655443 1 233
Q ss_pred EeCCCCC-HHHHHHHHHHccEEEECCCCccCChhHHHHHHh
Q 002468 424 HLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 463 (918)
Q Consensus 424 ~~~g~v~-~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~ 463 (918)
.++|..+ ..++..|-+.+||++-|+-| .++-|-+
T Consensus 198 cvyGG~~~~~Q~~~l~~gvdiviaTPGR------l~d~le~ 232 (519)
T KOG0331|consen 198 CVYGGAPKGPQLRDLERGVDVVIATPGR------LIDLLEE 232 (519)
T ss_pred EEeCCCCccHHHHHHhcCCcEEEeCChH------HHHHHHc
Confidence 4455554 78899999999999999854 5555554
No 394
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=20.64 E-value=1.1e+02 Score=31.72 Aligned_cols=40 Identities=8% Similarity=0.142 Sum_probs=32.2
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+.|.+.+.|+.|.+ .|.+++|+|+.+...+...+..+++
T Consensus 94 ~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRE-SGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHhCCh
Confidence 355688999999986 5899999999998888777776543
No 395
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=20.54 E-value=1.2e+02 Score=31.61 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=33.3
Q ss_pred cCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHHhcccCc
Q 002468 603 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 643 (918)
Q Consensus 603 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~l~l 643 (918)
.+-|.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 93 ~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 132 (226)
T PRK13222 93 RLYPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEALGI 132 (226)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 356789999999986 5899999999999988888877643
No 396
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=20.53 E-value=6.5e+02 Score=28.31 Aligned_cols=50 Identities=6% Similarity=0.169 Sum_probs=29.3
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCcccccccccCChhHHHHHHHhhcCCCCcEEEEcCC
Q 002468 564 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 629 (918)
Q Consensus 564 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 629 (918)
....++...+..++|..|-.... .......+.+.+..+. +...|.|++|-
T Consensus 149 a~~L~~~Gi~A~~vD~~~~~~~~--------------~~t~~~~i~~~~~~~~--~~~~v~IvtGF 198 (304)
T cd04248 149 ALLLQNRGVNARFVDLSGWRDSG--------------DMTLDERISEAFRDID--PRDELPIVTGY 198 (304)
T ss_pred HHHHHHCCCCeEEECcccccccC--------------CCCcHHHHHHHHHhhc--cCCcEEEeCCc
Confidence 33344455678888987653311 1123355666666543 35679999995
No 397
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=20.14 E-value=1.3e+03 Score=26.02 Aligned_cols=85 Identities=19% Similarity=0.171 Sum_probs=44.7
Q ss_pred CcEEEEEEEcCCCCCh---HHHHHHHHHHHHHHHhhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc---c-EEEECCCC
Q 002468 378 GKVVLLQIAVPTRTDV---PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT---D-VALVTSLR 450 (918)
Q Consensus 378 ~kv~Lvqig~psr~~~---~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A---D-v~vv~Sl~ 450 (918)
.+.+.|+||++++.-. .....+.++|.+++..- | ..|. |. ..+.-+.+-..+|-..+ + +.+. -.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~----~-~~~~-vt-tSRRTp~~~~~~L~~~~~~~~~~~~~--~~ 216 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAY----G-GSLL-VT-TSRRTPPEAEAALRELLKDNPGVYIW--DG 216 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhC----C-CeEE-EE-cCCCCcHHHHHHHHHhhcCCCceEEe--cC
Confidence 3566777888776432 22234555555555442 2 1221 22 23455555555554444 2 3244 56
Q ss_pred ccCChhHHHHHHhcCCCCceEEEeCC
Q 002468 451 DGMNLVSYEFVACQDLKKGVLILSEF 476 (918)
Q Consensus 451 EG~nLv~lEamA~~~~~~g~lIlSe~ 476 (918)
+|-| ...+++++- -.+|+|+-
T Consensus 217 ~~~n-Py~~~La~a----d~i~VT~D 237 (311)
T PF06258_consen 217 TGEN-PYLGFLAAA----DAIVVTED 237 (311)
T ss_pred CCCC-cHHHHHHhC----CEEEEcCc
Confidence 7777 577888884 45555543
No 398
>PLN00414 glycosyltransferase family protein
Probab=20.03 E-value=3.6e+02 Score=31.97 Aligned_cols=109 Identities=10% Similarity=0.180 Sum_probs=61.2
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCccCChhHHHHHHhcCCCCceEEEe----CCCCchhhc--c-CCeEEECC-----C
Q 002468 426 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL--G-AGAILVNP-----W 493 (918)
Q Consensus 426 ~g~v~~~el~aly~~ADv~vv~Sl~EG~nLv~lEamA~~~~~~g~lIlS----e~aG~~~~l--g-~~allVnP-----~ 493 (918)
.+.+++.++.+. .+.++||- .-|+| ..+|+++++ .|+|+- +..-.+..+ . .-|+.+.. -
T Consensus 317 ~~w~PQ~~vL~h-~~v~~fvt---H~G~n-S~~Ea~~~G----vP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 387 (446)
T PLN00414 317 EGWVEQPLILSH-PSVGCFVN---HCGFG-SMWESLVSD----CQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWF 387 (446)
T ss_pred eccCCHHHHhcC-CccceEEe---cCchh-HHHHHHHcC----CCEEecCcccchHHHHHHHHHHhCeEEEeccccCCcc
Confidence 467888776543 33355663 45776 468999983 444432 222222222 1 23455532 4
Q ss_pred CHHHHHHHHHHHhcCCHHHH---HHHHHHHHHHHHhc-CHHHHHHHHHHHHHHh
Q 002468 494 NITEVANAIARALNMSPEER---EKRHWHNFTHVTTH-TAQEWAETFVSELNDT 543 (918)
Q Consensus 494 D~~~lA~ai~~aL~m~~~er---~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~ 543 (918)
+.+++++++++++..+.+++ +++.+++++.+..- ....+.+.|++.+.+.
T Consensus 388 ~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 388 SKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred CHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 78899999999997654322 22333344443332 2256677777777543
Done!