Query 002469
Match_columns 918
No_of_seqs 364 out of 1950
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 00:33:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002469.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002469hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02400 cellulose synthase 100.0 3E-261 6E-266 2294.6 74.7 906 7-918 176-1085(1085)
2 PLN02436 cellulose synthase A 100.0 4E-260 8E-265 2276.5 75.5 905 2-918 181-1093(1094)
3 PLN02638 cellulose synthase A 100.0 4E-258 9E-263 2266.8 74.2 910 8-918 168-1079(1079)
4 PLN02915 cellulose synthase A 100.0 9E-253 2E-257 2216.5 73.2 880 24-918 137-1044(1044)
5 PLN02195 cellulose synthase A 100.0 5E-245 1E-249 2140.9 72.8 866 37-918 108-977 (977)
6 PLN02189 cellulose synthase 100.0 6E-245 1E-249 2148.6 71.3 858 8-918 179-1040(1040)
7 PLN02248 cellulose synthase-li 100.0 3E-220 7E-225 1939.0 68.6 786 87-905 261-1125(1135)
8 PF03552 Cellulose_synt: Cellu 100.0 3E-215 7E-220 1851.8 49.0 719 190-912 1-720 (720)
9 PLN02190 cellulose synthase-li 100.0 1E-196 3E-201 1699.2 62.3 727 91-897 6-756 (756)
10 PLN02893 Cellulose synthase-li 100.0 7E-189 2E-193 1642.3 65.8 707 91-895 9-728 (734)
11 TIGR03030 CelA cellulose synth 100.0 2E-68 4.4E-73 642.0 49.2 495 111-875 57-568 (713)
12 PRK11498 bcsA cellulose syntha 100.0 2.3E-68 5E-73 642.5 46.7 478 112-875 188-681 (852)
13 PRK05454 glucosyltransferase M 100.0 3.4E-36 7.4E-41 359.5 47.4 362 109-714 40-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 1.3E-34 2.9E-39 310.1 21.9 182 355-666 67-253 (254)
15 COG1215 Glycosyltransferases, 100.0 6.3E-31 1.4E-35 296.9 28.1 233 187-670 53-290 (439)
16 PRK14583 hmsR N-glycosyltransf 100.0 8E-29 1.7E-33 284.3 33.3 232 185-671 72-307 (444)
17 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 5.1E-28 1.1E-32 277.5 33.6 288 184-722 45-341 (439)
18 PRK11204 N-glycosyltransferase 100.0 2.7E-27 6E-32 268.2 33.1 232 184-671 50-286 (420)
19 PRK14716 bacteriophage N4 adso 99.9 1.5E-25 3.4E-30 260.2 31.0 265 186-696 64-355 (504)
20 cd06421 CESA_CelA_like CESA_Ce 99.9 2.5E-25 5.4E-30 228.9 20.2 229 188-668 1-234 (234)
21 PRK11234 nfrB bacteriophage N4 99.9 2.5E-24 5.5E-29 259.1 28.2 242 185-670 60-335 (727)
22 cd06437 CESA_CaSu_A2 Cellulose 99.9 9.4E-25 2E-29 226.9 21.0 228 188-664 1-232 (232)
23 cd06427 CESA_like_2 CESA_like_ 99.9 2.1E-23 4.5E-28 219.0 21.1 231 188-670 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 99.9 4.2E-23 9.1E-28 214.1 22.3 173 357-670 58-234 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 2.2E-23 4.7E-28 214.8 8.3 224 188-663 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 99.9 4.4E-20 9.6E-25 207.7 23.9 236 185-665 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 1.9E-21 4.2E-26 205.8 11.7 52 613-666 190-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.8 3.6E-19 7.9E-24 212.9 30.0 172 370-669 139-342 (703)
29 cd04192 GT_2_like_e Subfamily 99.8 1.4E-19 3E-24 185.0 17.8 226 192-663 1-229 (229)
30 cd02520 Glucosylceramide_synth 99.8 7.1E-19 1.5E-23 179.1 17.0 123 372-663 73-195 (196)
31 cd06434 GT2_HAS Hyaluronan syn 99.8 4.1E-18 8.8E-23 176.2 18.5 59 370-437 62-120 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.8 1.6E-17 3.5E-22 174.0 20.0 128 183-436 24-151 (251)
33 TIGR03469 HonB hopene-associat 99.8 1.1E-16 2.4E-21 180.9 25.2 133 184-430 36-169 (384)
34 COG2943 MdoH Membrane glycosyl 99.7 1.2E-14 2.7E-19 164.2 37.9 220 356-714 213-439 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.7 1.4E-15 3E-20 157.5 20.5 54 615-670 180-233 (249)
36 PF13632 Glyco_trans_2_3: Glyc 99.6 8.1E-16 1.8E-20 155.6 10.7 138 392-664 1-143 (193)
37 cd06436 GlcNAc-1-P_transferase 99.6 2.5E-14 5.4E-19 145.8 13.8 115 356-477 51-175 (191)
38 cd06438 EpsO_like EpsO protein 99.5 3.9E-13 8.3E-18 135.4 12.6 102 370-477 61-167 (183)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.4 4.2E-12 9.1E-17 128.2 17.2 122 188-433 1-123 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.4 1.4E-11 3E-16 124.5 16.8 65 357-435 57-122 (201)
41 PF13506 Glyco_transf_21: Glyc 99.3 2.6E-11 5.7E-16 123.7 10.9 60 370-437 15-74 (175)
42 cd06433 GT_2_WfgS_like WfgS an 99.2 2.2E-10 4.9E-15 114.0 15.6 55 372-435 62-117 (202)
43 PF03142 Chitin_synth_2: Chiti 99.2 6.3E-09 1.4E-13 122.0 26.5 54 614-669 324-379 (527)
44 cd02510 pp-GalNAc-T pp-GalNAc- 99.2 1.4E-09 3.1E-14 118.5 19.5 110 192-418 2-111 (299)
45 cd04196 GT_2_like_d Subfamily 99.2 5E-10 1.1E-14 113.4 14.8 57 370-435 64-121 (214)
46 cd06420 GT2_Chondriotin_Pol_N 99.1 2.2E-09 4.8E-14 106.6 16.5 41 372-418 66-106 (182)
47 cd04186 GT_2_like_c Subfamily 99.1 1.5E-09 3.3E-14 104.8 14.9 51 371-430 60-111 (166)
48 cd02522 GT_2_like_a GT_2_like_ 99.1 3.9E-09 8.5E-14 108.1 16.6 40 190-235 1-40 (221)
49 PLN02726 dolichyl-phosphate be 99.1 5.7E-09 1.2E-13 110.3 18.2 60 357-430 70-129 (243)
50 cd06913 beta3GnTL1_like Beta 1 99.1 3.7E-09 8E-14 109.2 16.4 42 192-238 1-42 (219)
51 cd06423 CESA_like CESA_like is 99.0 3.6E-09 7.7E-14 101.2 13.0 63 357-433 55-118 (180)
52 cd02526 GT2_RfbF_like RfbF is 99.0 3.6E-09 7.8E-14 109.7 13.8 65 357-433 49-117 (237)
53 cd06442 DPM1_like DPM1_like re 99.0 1.2E-08 2.5E-13 104.8 15.5 60 357-430 55-114 (224)
54 cd04185 GT_2_like_b Subfamily 99.0 9.1E-09 2E-13 104.5 14.4 56 371-433 62-117 (202)
55 PF00535 Glycos_transf_2: Glyc 99.0 1E-09 2.2E-14 105.2 6.6 111 356-478 54-166 (169)
56 PRK10073 putative glycosyl tra 98.7 1.9E-07 4.1E-12 104.3 16.4 110 186-418 4-113 (328)
57 cd04188 DPG_synthase DPG_synth 98.7 1.3E-07 2.9E-12 97.1 14.0 52 372-432 69-120 (211)
58 cd04179 DPM_DPG-synthase_like 98.7 1.3E-07 2.9E-12 93.9 12.0 65 357-435 56-120 (185)
59 PRK10018 putative glycosyl tra 98.7 7.6E-07 1.6E-11 97.6 18.0 52 356-417 61-112 (279)
60 TIGR01556 rhamnosyltran L-rham 98.7 4.2E-07 9.1E-12 98.1 15.8 69 356-434 46-114 (281)
61 PRK10063 putative glycosyl tra 98.5 2.1E-06 4.6E-11 92.2 16.7 48 188-239 1-49 (248)
62 cd04187 DPM1_like_bac Bacteria 98.5 1.1E-06 2.3E-11 88.0 12.1 104 357-478 57-160 (181)
63 cd00761 Glyco_tranf_GTA_type G 98.4 3.6E-06 7.8E-11 78.5 13.6 52 370-430 62-114 (156)
64 PF10111 Glyco_tranf_2_2: Glyc 98.4 5.6E-06 1.2E-10 90.4 16.4 63 371-439 74-136 (281)
65 PTZ00260 dolichyl-phosphate be 98.3 1.9E-05 4.2E-10 88.6 16.9 42 371-417 148-189 (333)
66 COG1216 Predicted glycosyltran 98.3 2.1E-05 4.6E-10 86.7 16.8 68 356-435 57-126 (305)
67 KOG2571 Chitin synthase/hyalur 98.3 9.4E-06 2E-10 99.2 15.1 50 614-665 549-598 (862)
68 PRK13915 putative glucosyl-3-p 98.1 1.2E-05 2.7E-10 89.2 11.5 51 371-429 101-152 (306)
69 PRK10714 undecaprenyl phosphat 97.5 0.00067 1.5E-08 76.0 12.4 41 371-416 76-116 (325)
70 COG0463 WcaA Glycosyltransfera 97.2 0.0028 6.1E-08 60.0 10.4 45 187-237 2-46 (291)
71 cd02511 Beta4Glucosyltransfera 97.2 0.0033 7.2E-08 66.2 11.6 42 372-418 58-99 (229)
72 KOG2547 Ceramide glucosyltrans 97.1 0.0063 1.4E-07 68.6 13.8 157 370-662 155-314 (431)
73 cd02514 GT13_GLCNAC-TI GT13_GL 95.4 0.17 3.6E-06 57.5 12.9 41 191-235 3-43 (334)
74 KOG2978 Dolichol-phosphate man 93.7 0.36 7.7E-06 50.6 9.2 53 356-418 64-116 (238)
75 PF02364 Glucan_synthase: 1,3- 91.4 4.1 8.9E-05 51.2 15.7 102 557-693 381-483 (817)
76 KOG2977 Glycosyltransferase [G 80.3 25 0.00055 39.5 12.6 41 372-416 144-186 (323)
77 PF13712 Glyco_tranf_2_5: Glyc 75.1 9.1 0.0002 40.9 7.4 45 371-419 40-85 (217)
78 PRK14503 mannosyl-3-phosphogly 56.4 25 0.00055 40.5 6.5 41 370-413 142-182 (393)
79 KOG3737 Predicted polypeptide 55.6 54 0.0012 38.3 8.9 48 183-233 150-197 (603)
80 KOG3736 Polypeptide N-acetylga 52.0 18 0.00039 44.2 4.8 50 183-235 137-186 (578)
81 PF13704 Glyco_tranf_2_4: Glyc 51.2 23 0.00051 32.1 4.4 27 373-402 58-84 (97)
82 TIGR02460 osmo_MPGsynth mannos 45.8 60 0.0013 37.4 7.3 40 370-412 141-180 (381)
83 COG4707 Uncharacterized protei 44.9 8 0.00017 36.5 0.3 44 292-346 20-70 (107)
84 KOG2792 Putative cytochrome C 39.8 24 0.00051 39.1 2.9 41 170-211 158-198 (280)
85 PF09623 Cas_NE0113: CRISPR-as 37.3 2.9E+02 0.0064 30.1 10.7 60 192-260 4-63 (224)
86 PF09488 Osmo_MPGsynth: Mannos 32.9 51 0.0011 38.2 4.2 40 370-412 141-180 (381)
87 PF13896 Glyco_transf_49: Glyc 30.5 59 0.0013 36.9 4.3 40 387-427 125-164 (317)
88 PF03452 Anp1: Anp1; InterPro 29.7 4E+02 0.0086 29.9 10.4 55 185-243 22-78 (269)
89 COG4858 Uncharacterized membra 29.4 2.2E+02 0.0047 30.5 7.7 60 820-879 99-161 (226)
90 COG4818 Predicted membrane pro 29.0 3.3E+02 0.0072 26.1 8.0 26 767-792 5-30 (105)
91 PRK14502 bifunctional mannosyl 28.7 1.4E+02 0.003 37.7 7.3 41 369-412 145-185 (694)
92 PF07851 TMPIT: TMPIT-like pro 26.2 1E+03 0.022 27.6 13.0 18 748-765 172-189 (330)
93 PF15050 SCIMP: SCIMP protein 24.1 79 0.0017 31.2 3.2 40 757-797 2-46 (133)
94 PF11712 Vma12: Endoplasmic re 24.0 2.3E+02 0.005 28.3 6.8 18 40-57 21-38 (142)
95 cd00899 b4GalT Beta-4-Galactos 23.9 60 0.0013 35.2 2.7 81 558-668 110-200 (219)
96 KOG0916 1,3-beta-glucan syntha 21.4 1.9E+03 0.041 30.4 15.3 83 614-702 1173-1257(1679)
97 COG4226 HicB Predicted nucleas 20.7 1E+02 0.0022 30.0 3.3 17 250-266 53-69 (111)
No 1
>PLN02400 cellulose synthase
Probab=100.00 E-value=3e-261 Score=2294.60 Aligned_cols=906 Identities=77% Similarity=1.335 Sum_probs=849.3
Q ss_pred CCCCcc---cccCCCCCCCCccccCCCCcCCCCCCCchhHHHhhHHHhhhhccccccccCCCccccCCCCCCCCCCCCCc
Q 002469 7 GPGKRI---HYSGDINQSPSIRVVDPVREFGSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQATSERGGGDIDASTDVLV 83 (918)
Q Consensus 7 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (918)
|.|||| ||+|.. .+.++++|||+||+++||||||+||||||+||+||+|++.++.++. ++++|++.+| +++++
T Consensus 176 ~~~~~vh~~p~~d~~-~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~~--~~~~~g~~~~-~~~~~ 251 (1085)
T PLN02400 176 PAERNANSSPYIDPR-QPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKY--HEGKGGDMEG-TGSNG 251 (1085)
T ss_pred ccCCcccccCccCcc-cCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhcccccccc--ccccccCCCC-CCCCc
Confidence 567888 488843 4577899999999999999999999999999999987766555543 3555555443 34457
Q ss_pred ccccccccCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 002469 84 DDSLLNDEARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWL 163 (918)
Q Consensus 84 ~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~ 163 (918)
+|+++|+++++||+||+|++++.+++||++++++|+++++||+||++|++++++++|+++++||+||+|+|+|+|++||+
T Consensus 252 ~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~ 331 (1085)
T PLN02400 252 DELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWFALSWLLDQFPKWY 331 (1085)
T ss_pred ccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchHhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhh
Q 002469 164 PVNRETYLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSE 243 (918)
Q Consensus 164 pi~r~~~~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E 243 (918)
||+|+||+|||++||++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++||||||.|
T Consensus 332 Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~E 411 (1085)
T PLN02400 332 PINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSE 411 (1085)
T ss_pred cccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHH
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhhhHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCC
Q 002469 244 TSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGT 323 (918)
Q Consensus 244 ~~~fA~~WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~ 323 (918)
||+|||+||||||||+|||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+|+++++++|+++|.|+|||
T Consensus 412 aa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt 491 (1085)
T PLN02400 412 TAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGT 491 (1085)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCC
Q 002469 324 PWPGNNTRDHPGMIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 403 (918)
Q Consensus 324 ~w~~~~~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~ 403 (918)
+|||+++||||+|||||++++|+.|.+|++||+||||||||||||+||+||||||+|+||||++||||||||||||||+|
T Consensus 492 ~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~N 571 (1085)
T PLN02400 492 PWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN 571 (1085)
T ss_pred cCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCC
Q 002469 404 NSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 483 (918)
Q Consensus 404 ~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~ 483 (918)
||+++|+||||||||+.|+++|||||||+|+|+|++|||+|++++|||++|+|+||+|||+|+||||+|||+||||++||
T Consensus 572 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~ 651 (1085)
T PLN02400 572 NSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPV 651 (1085)
T ss_pred CchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCch
Q 002469 484 LKPKHRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 563 (918)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s 563 (918)
..++.....+.++|||++|++.+..+....++++..+..+.+.+++++++++++.+| ++++++.++++++++++||+|
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~fG~S 729 (1085)
T PLN02400 652 LTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEG--YDDERSLLMSQKSLEKRFGQS 729 (1085)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccchhhhhhhhhhhhhhcccc
Confidence 765442332322345566655433322222333334555667789999999999887 677888899999999999999
Q ss_pred hHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCccc
Q 002469 564 AVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFK 643 (918)
Q Consensus 564 ~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~ 643 (918)
++|++|+++++||.+...+++++++||+||+||+||++|+||+||||.|+|+|||+.||++||++|||++|++|++++|.
T Consensus 730 ~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~ 809 (1085)
T PLN02400 730 PVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFK 809 (1085)
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred ccCCCCHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccc
Q 002469 644 GSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMP 723 (918)
Q Consensus 644 G~aP~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip 723 (918)
|++|+|+.+++.||+||++|++||+++++||+++|+.++|+++||++|+++++||++++++++|+++|++||++|++++|
T Consensus 810 GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P 889 (1085)
T PLN02400 810 GSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIP 889 (1085)
T ss_pred CcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99999999999999999999999999999999987778999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCC
Q 002469 724 QISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG 803 (918)
Q Consensus 724 ~~s~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~ 803 (918)
.++++++++|+++|+++++++++|++|+|+++++||||||||+|.++|+++||++++++|+|++++++|.||+|..++++
T Consensus 890 ~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~ 969 (1085)
T PLN02400 890 EISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG 969 (1085)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987655
Q ss_pred CcceeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 002469 804 DFTELYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVV 883 (918)
Q Consensus 804 ~~~~l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~~~P~~v~~ 883 (918)
.+.++|+|+|+++++|+++++++|++|+++|+++++.++++.|+++++++++++|+++|+|||++|||||++|+|+||++
T Consensus 970 ~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~~r~P~~v~~ 1049 (1085)
T PLN02400 970 DFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIV 1049 (1085)
T ss_pred cccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeHHH
Confidence 67899999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhheeEecCCCCCCCCC-CccccCCCC
Q 002469 884 WSILLASIFSLLWVRVDPFTTRVTGP-DVEQCGINC 918 (918)
Q Consensus 884 ~s~~l~~~f~~l~v~~~~~~~~~~~~-~~~~~~~~~ 918 (918)
||++||++|++|||+||||+++++|| ++++||++|
T Consensus 1050 ~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1050 WSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred HHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence 99999999999999999999999999 899999999
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=3.5e-260 Score=2276.49 Aligned_cols=905 Identities=72% Similarity=1.289 Sum_probs=844.7
Q ss_pred CCCCCCCCCcc-c--ccCCCCCCCCccccCCCCcCCCCCCCchhHHHhhHHHhhhhccccccccCCCccccCCCCCCCCC
Q 002469 2 ASPGVGPGKRI-H--YSGDINQSPSIRVVDPVREFGSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQATSERGGGDIDAS 78 (918)
Q Consensus 2 ~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (918)
..|+.|.|||| | |++.. .+.++++|||+||+++||||||+||||||+||.||+++++++.+ . +++++++.+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~~~~~~~~~-~--~~~~~~~~~~- 255 (1094)
T PLN02436 181 VPPSTGHGNRVHPMPFPDSS-ASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEKLQVVKH-E--GGNDGGNNDG- 255 (1094)
T ss_pred cCCccccccccccccccccc-ccCCCccCCccccccccccCcHHHHHHHHHHHhhhhhccccccc-c--cccccCCCCC-
Confidence 45677899999 4 76643 45788999999999999999999999999999999854443333 2 3555555544
Q ss_pred CCCCcccccccccCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 002469 79 TDVLVDDSLLNDEARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQ 158 (918)
Q Consensus 79 ~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~ 158 (918)
++.+++|++++|++++||+||+|++++.++|||++++++|+++++||+||++|++.+++++|+++++||+||+|+|+|+|
T Consensus 256 ~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~WFaf~Wll~Q 335 (1094)
T PLN02436 256 DELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQ 335 (1094)
T ss_pred CCCCCcccccccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHcc
Confidence 33457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccchHhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhH
Q 002469 159 FPKWLPVNRETYLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTF 238 (918)
Q Consensus 159 ~~~w~pi~r~~~~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~ 238 (918)
++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++|||
T Consensus 336 ~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf 415 (1094)
T PLN02436 336 FPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTF 415 (1094)
T ss_pred CcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHH
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHhhhhHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCccccc
Q 002469 239 EALSETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWV 318 (918)
Q Consensus 239 ~~l~E~~~fA~~WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~ 318 (918)
|||.|||+|||+||||||||+|||||||+||+++.|+++++++|+|++|||+|||||||||+|||+|+++++++||++|.
T Consensus 416 ~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~ 495 (1094)
T PLN02436 416 EALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWT 495 (1094)
T ss_pred HHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecC
Q 002469 319 MQDGTPWPGNNTRDHPGMIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDC 398 (918)
Q Consensus 319 m~dg~~w~~~~~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~ 398 (918)
|+|||+|||++++|||+|||||++++|+.|.+|++||+||||||||||||+||+||||||+|+||||++|||||||||||
T Consensus 496 m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDC 575 (1094)
T PLN02436 496 MQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDC 575 (1094)
T ss_pred hccCccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhc
Q 002469 399 DHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALY 478 (918)
Q Consensus 399 D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALy 478 (918)
|||+|||+++|+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+|+||||+|||+|||
T Consensus 576 DmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLY 655 (1094)
T PLN02436 576 DHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALY 655 (1094)
T ss_pred ccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC-c----ccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhH
Q 002469 479 GYEPPLKPKHRKPGL-L----SSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQ 553 (918)
Q Consensus 479 g~~p~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 553 (918)
|++||...+.+..++ | |+||||.++++++.++...+ +.++.+...+++++++++++++| ++++++..+++
T Consensus 656 G~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 730 (1094)
T PLN02436 656 GYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKK---KKKNREASKQIHALENIEEGIEG--SNNEKSSETPQ 730 (1094)
T ss_pred ccCCccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc--ccchhhhhhhh
Confidence 999987655433322 1 24555766554332221111 12333445578889999988877 67788889999
Q ss_pred HHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEE
Q 002469 554 MSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSI 633 (918)
Q Consensus 554 ~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~Gwrsv 633 (918)
++++++||+|++|++|+++++||.+.+.+.+++++||+||+||+||++|+||+||||.|+|+|||+.||++||++|||++
T Consensus 731 ~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSv 810 (1094)
T PLN02436 731 LKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSV 810 (1094)
T ss_pred hhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceE
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHH
Q 002469 634 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAV 713 (918)
Q Consensus 634 Y~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil 713 (918)
|++|+++||.|++|+|+.+++.||+||++|++||++++++|+++|+.++|+++||++|+++++||++++++++|+++|++
T Consensus 811 Y~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l 890 (1094)
T PLN02436 811 YCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAI 890 (1094)
T ss_pred eCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888999999999999999999999999999999999998877899999999999999999999999999999999
Q ss_pred HHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCce
Q 002469 714 CLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFT 793 (918)
Q Consensus 714 ~Ll~Gi~iip~~s~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~ 793 (918)
||++|++++|.++++++++|+++|+++++++++|++|+|.++++||||||||+|+++++++||++++++|+|++++++|.
T Consensus 891 ~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~ 970 (1094)
T PLN02436 891 CLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFT 970 (1094)
T ss_pred HHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccce
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCcceeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcC
Q 002469 794 VTSKASDEDGDFTELYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGR 873 (918)
Q Consensus 794 VTpKg~~~d~~~~~l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR 873 (918)
||+|..++ +.++++|+|+|+++++|+++++++|++|+++|++++++++++.|+++++++++++|+++|+|||++|||||
T Consensus 971 VTsK~~d~-~~~a~ly~f~~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr 1049 (1094)
T PLN02436 971 VTSKAADD-GEFSELYLFKWTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK 1049 (1094)
T ss_pred eccccccc-ccccceeeecceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99998873 46778999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHhheeEecCCCCCCCCCCccccCCCC
Q 002469 874 QNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 918 (918)
Q Consensus 874 ~~~~P~~v~~~s~~l~~~f~~l~v~~~~~~~~~~~~~~~~~~~~~ 918 (918)
++|+|+||++||++||++|+||||+||||+++ +||++++||++|
T Consensus 1050 ~~r~P~~v~v~s~lla~~~~l~~v~~~~~~~~-~~~~~~~~~~~~ 1093 (1094)
T PLN02436 1050 QDRMPTIILVWSILLASILTLLWVRVNPFVSK-GGPVLEICGLDC 1093 (1094)
T ss_pred CCCCCeeehHHHHHHHHHHHHHHeeeccccCC-CCccccccCccC
Confidence 99999999999999999999999999999999 999999999999
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=4.2e-258 Score=2266.77 Aligned_cols=910 Identities=93% Similarity=1.515 Sum_probs=845.7
Q ss_pred CCCcccccCCCCCCCCccccCCCCcCCCCCCCchhHHHhhHHHhhhhccccccccCCCccccCCCC-CCCCCCCCCcccc
Q 002469 8 PGKRIHYSGDINQSPSIRVVDPVREFGSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQATSERGGG-DIDASTDVLVDDS 86 (918)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 86 (918)
.||||||+|+.+.+.++++|||+||+++||||||+||||||+||.||+|++.++.++..-++++|+ +.++.++.+++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~wk~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1079)
T PLN02638 168 GGKRIPYASDVNQSPNIRVVDPVREFGSPGLGNVAWKERVDGWKMKQDKNTIPMSTGTAPSEGRGGGDIDASTDVLMDDA 247 (1079)
T ss_pred cCCcccccccccccCCcccCCccccccccccccHHHHHHHHHHHhcccccccccccccccccccCcCCCCCccccccccc
Confidence 679999998765668889999999999999999999999999999998776655554332455543 3222122346899
Q ss_pred cccccCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 002469 87 LLNDEARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWLPVN 166 (918)
Q Consensus 87 ~~~~~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pi~ 166 (918)
|+|+++++||+||+|++++.+++||++++++|+++++||+||++|++.+++++|+++++||+||+|+|+|+|++||+||+
T Consensus 248 ~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~ 327 (1079)
T PLN02638 248 LLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFALSWILDQFPKWLPVN 327 (1079)
T ss_pred cccccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHH
Q 002469 167 RETYLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSE 246 (918)
Q Consensus 167 r~~~~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~ 246 (918)
|+||+|||++||++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++||||||.|||+
T Consensus 328 R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~ 407 (1079)
T PLN02638 328 RETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSE 407 (1079)
T ss_pred cccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHH
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCC
Q 002469 247 FARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWP 326 (918)
Q Consensus 247 fA~~WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~ 326 (918)
|||+||||||||||||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+++++++++|+++|.|+||++||
T Consensus 408 FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~ 487 (1079)
T PLN02638 408 FARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWP 487 (1079)
T ss_pred HHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchH
Q 002469 327 GNNTRDHPGMIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSK 406 (918)
Q Consensus 327 ~~~~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~ 406 (918)
|++++|||+||||+++++|+.|.+|++||+||||||||||||+||+||||||+|+||||++||||||||||||||+|||+
T Consensus 488 g~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~ 567 (1079)
T PLN02638 488 GNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSK 567 (1079)
T ss_pred CCCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCC
Q 002469 407 ALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKP 486 (918)
Q Consensus 407 ~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~ 486 (918)
+||+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++||...
T Consensus 568 alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~ 647 (1079)
T PLN02638 568 ALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKP 647 (1079)
T ss_pred HHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCcccccCCC-cccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhH
Q 002469 487 KHRKPGLLSSLFGGS-RKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAV 565 (918)
Q Consensus 487 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~ 565 (918)
+.....+++ |||+. +++.++.+++..+++...++.+.+.+++++++++++.++...+++++.++++..++++||+|++
T Consensus 648 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~ 726 (1079)
T PLN02638 648 KHKKPGFLS-SLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAV 726 (1079)
T ss_pred ccccccccc-ccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHH
Confidence 332222222 44554 3222111111111111223344556778888888887776667788889999999999999999
Q ss_pred HHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCccccc
Q 002469 566 FVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGS 645 (918)
Q Consensus 566 f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~ 645 (918)
|++|++++.+|.+...+++++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++|++|++++|.|+
T Consensus 727 fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~Gl 806 (1079)
T PLN02638 727 FVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGS 806 (1079)
T ss_pred HHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCc
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999888889999
Q ss_pred CCCCHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccc
Q 002469 646 APINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQI 725 (918)
Q Consensus 646 aP~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~ 725 (918)
+|+|+.+++.||+||++|++||+++++||+++|+.++|+++||++|+++++||++++++++|+++|++||++|++++|.+
T Consensus 807 AP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~v 886 (1079)
T PLN02638 807 APINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQI 886 (1079)
T ss_pred CCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 99999999999999999999999999999998877899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCCCc
Q 002469 726 SNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF 805 (918)
Q Consensus 726 s~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~~~ 805 (918)
+++++++|+++|+++++++++|++|+|.++++||||||||+|+++++++||++++++|+|++++++|.||+|..++++.+
T Consensus 887 s~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~~~~~ 966 (1079)
T PLN02638 887 SNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF 966 (1079)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccccccccc
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999998866678
Q ss_pred ceeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 002469 806 TELYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWS 885 (918)
Q Consensus 806 ~~l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~~~P~~v~~~s 885 (918)
+++|+|+|+++++|+++++++|++|+++|+++++.+++..|+++++++++++|+++|+|||++|||||++|+|+||++||
T Consensus 967 ~ely~f~wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~~r~P~~v~v~s 1046 (1079)
T PLN02638 967 AELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWS 1046 (1079)
T ss_pred cceeEecceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHH
Confidence 89999999999999999999999999999999998888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhheeEecCCCCCCCCCCccccCCCC
Q 002469 886 ILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 918 (918)
Q Consensus 886 ~~l~~~f~~l~v~~~~~~~~~~~~~~~~~~~~~ 918 (918)
++|+++|++|||+||||+++++||.+++||++|
T Consensus 1047 ~ll~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~ 1079 (1079)
T PLN02638 1047 ILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1079 (1079)
T ss_pred HHHHHHHHHHHheecccccCCCCchhhccCcCC
Confidence 999999999999999999999999999999999
No 4
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=8.6e-253 Score=2216.47 Aligned_cols=880 Identities=74% Similarity=1.293 Sum_probs=817.1
Q ss_pred ccccCCCCcCCCCCCCchhHHHhhHHHhhhhccccccccCCCccccCCCCCCCCCCCCCcccccccccCCCCCeeeeecC
Q 002469 24 IRVVDPVREFGSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQATSERGGGDIDASTDVLVDDSLLNDEARQPLSRKVPIP 103 (918)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~ 103 (918)
..+|||+|| |||||+||||||+||+||+ +++++.+. .++.+ ++.+++|+|+|+++++||+||+|++
T Consensus 137 ~~~~~~~~~----~~g~~~wk~r~~~wk~~~~-~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~pL~~~~~i~ 202 (1044)
T PLN02915 137 GKDLEAERE----GYGNAEWKDRVDKWKTRQE-KRGLVNKD-------DSDDG--DDKGDEEEYLLAEARQPLWRKVPIP 202 (1044)
T ss_pred CCCcCcccc----CcCCHHHHHHHHHHHhhhh-hhcccccc-------ccCCC--CCCCCcccccccccCCCceEEEecC
Confidence 467999999 8999999999999999996 44444431 11111 2234789999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhccccccccccchHhHhhhhhccCCC
Q 002469 104 SSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYEREGE 183 (918)
Q Consensus 104 ~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~~~drL~~r~~~~~~ 183 (918)
++.++|||++++++|+++++||+||++|++++++++|+++++||+||+|+|+|+|++||+||+|+||+|||++||+++++
T Consensus 203 ~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~e~~~~ 282 (1044)
T PLN02915 203 SSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGE 282 (1044)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHHHHHHHHHHHHHHHHHHccCccccccccccCHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCC
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepr 263 (918)
+++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++||||||.|||+|||+|||||||||||||
T Consensus 283 ~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepR 362 (1044)
T PLN02915 283 PNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPR 362 (1044)
T ss_pred cccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecC
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~ 343 (918)
|||+||+++.|+++++++|+|++|||+|||||||||+|||+|+++++++|+++|.|+|||+|||+++||||+|||||+++
T Consensus 363 aPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~ 442 (1044)
T PLN02915 363 APEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGS 442 (1044)
T ss_pred CHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCce
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKH 423 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~ 423 (918)
+|+.|.+|++||+||||||||||||+||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|++
T Consensus 443 ~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~ 522 (1044)
T PLN02915 443 EGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKK 522 (1044)
T ss_pred CCCcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCC-----ccccc
Q 002469 424 VCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGL-----LSSLF 498 (918)
Q Consensus 424 va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~-----~~~~~ 498 (918)
+|||||||+|+|+|++|||+|+++||||++|+|+||+|||+|+||||+|||+||||++||..++.++.++ .|+||
T Consensus 523 ~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~ 602 (1044)
T PLN02915 523 LCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCC 602 (1044)
T ss_pred eEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999997655554433 12455
Q ss_pred CCCcccCCCcccc-CC--------Cc-cc------------CCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHH
Q 002469 499 GGSRKKNSKSSKK-GS--------DK-KK------------SSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSL 556 (918)
Q Consensus 499 ~~~~~~~~~~~~~-~~--------~~-~~------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 556 (918)
|+.++++++...+ .. .. ++ .....+.+.+.|++++++++++|. .+.+++.+++++++
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 681 (1044)
T PLN02915 603 CGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGY-DELEKSSLMSQKNF 681 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cchhhhhhhhhhhh
Confidence 5655553322111 00 00 00 001233455778999999998882 23477889999999
Q ss_pred HHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeC
Q 002469 557 EKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCM 636 (918)
Q Consensus 557 ~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~ 636 (918)
+++||+|++|++|++++.+|.+...+.+++++||+||+||+||++|+||+||||.|+|+|||+.||++||++|||++|++
T Consensus 682 ~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~ 761 (1044)
T PLN02915 682 EKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCM 761 (1044)
T ss_pred hhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeC
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCCHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 002469 637 PKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLL 716 (918)
Q Consensus 637 p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll 716 (918)
|++++|.|++|+|+.++++||+||++|++||++++++|+++++.++|+++||++|+++++||++++++++|+++|++||+
T Consensus 762 p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LL 841 (1044)
T PLN02915 762 PKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLL 841 (1044)
T ss_pred CCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999998777899999999999999999999999999999999999
Q ss_pred hCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceecc
Q 002469 717 TNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTS 796 (918)
Q Consensus 717 ~Gi~iip~~s~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTp 796 (918)
+|++++|.++..++++|+++|++++++++++++|+|+++++|||+||||+|+++++++||++++++++|++++++|+||+
T Consensus 842 tG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTs 921 (1044)
T PLN02915 842 TGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTS 921 (1044)
T ss_pred cCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecC
Confidence 99999998877777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-CCcceeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCC
Q 002469 797 KASDED-GDFTELYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQN 875 (918)
Q Consensus 797 Kg~~~d-~~~~~l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~ 875 (918)
|+.+.+ ..++++|+|+|+++++|+++++++|++|+++|++++++++++.||++++++++++|+++|++||++|||||++
T Consensus 922 K~~d~~~d~~~ely~F~~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~~ 1001 (1044)
T PLN02915 922 KAADDEADEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQN 1001 (1044)
T ss_pred CccccchhhhccceeecceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 998643 3467899999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHhheeEecCCCCCCCCCCccccCCCC
Q 002469 876 RTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 918 (918)
Q Consensus 876 ~~P~~v~~~s~~l~~~f~~l~v~~~~~~~~~~~~~~~~~~~~~ 918 (918)
|+|+||++||++||++|++|||+||||+++++||++++||++|
T Consensus 1002 r~P~~v~v~s~lla~~~~ll~v~~~~~~~~~~~~~~~~~~~~~ 1044 (1044)
T PLN02915 1002 RTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPILKQCGVEC 1044 (1044)
T ss_pred CCCeeehHHHHHHHHHHHHHHheeccccCCCCCccccccCCCC
Confidence 9999999999999999999999999999999999999999999
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=4.5e-245 Score=2140.86 Aligned_cols=866 Identities=73% Similarity=1.282 Sum_probs=802.2
Q ss_pred CCCchhHHHhhHHHhhhhccccccccCCCccccCCCCCCCCCCCCCcccccccccCCCCCeeeeecCCCCCchhHHHHHH
Q 002469 37 GLGNVAWKERVDGWKMKQEKNVVPMSTGQATSERGGGDIDASTDVLVDDSLLNDEARQPLSRKVPIPSSRINPYRMVIFL 116 (918)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~i~~ 116 (918)
+|||++||||||+||.||+|++.++.++.. .+ + +.+ ++.+++|+|+ ||.++||+||+|++++.++|||+++++
T Consensus 108 ~~~~~~wk~r~~~wk~~~~~~~~~~~~~~~-~~--~-~~~--~~~~~~~~~~-~~~~~pL~~~~~i~~~~~~pyR~~~~~ 180 (977)
T PLN02195 108 EYGNPIWKNRVESWKDKKNKKKKSAKKKEA-HK--A-QIP--PEQQMEEKPS-ADAYEPLSRVIPIPRNKLTPYRAVIIM 180 (977)
T ss_pred ccCCHHHHHHHHHHHHhhhhhccccccccc-cc--c-CCC--CccCCccccc-ccccCCceEEEecCcccchhHHHHHHH
Confidence 499999999999999999876665554321 12 2 222 2344688886 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhccccccccccchHhHhhhhhccCCCCCCCcceeEEEec
Q 002469 117 RLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYEREGEPSQLAAVDIFVST 196 (918)
Q Consensus 117 ~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~~~drL~~r~~~~~~~~~lp~VDvfV~t 196 (918)
+++++++||+||++|+++++.|+|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||||
T Consensus 181 ~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~T 260 (977)
T PLN02195 181 RLIILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRETYIDRLSARYEREGEPSQLAAVDFFVST 260 (977)
T ss_pred HHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHhcccccccccceECHHHHHHHhccCCCcccCCceeeEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchhhhhcccccc
Q 002469 197 VDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYL 276 (918)
Q Consensus 197 ~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~yf~~~~~~~ 276 (918)
+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||||||||||+||+++.|++
T Consensus 261 ADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~ 340 (977)
T PLN02195 261 VDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQKIDYL 340 (977)
T ss_pred CCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCCCCCCCCCCc
Q 002469 277 KDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGLDAEGNELPR 356 (918)
Q Consensus 277 ~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~d~~~~~lP~ 356 (918)
+++.+|+|++|||+|||||||||+|||+|+++++++|+++|.|+|||+|||+++||||+||||+++++|+.|.+|++||+
T Consensus 341 ~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~ 420 (977)
T PLN02195 341 KDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEGNELPR 420 (977)
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCcccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGI 436 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~ 436 (918)
|||||||||||++||+||||||+++||||++||||||||||||||+|||++||+|||||+||+.|+++|||||||+|+|+
T Consensus 421 LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i 500 (977)
T PLN02195 421 LVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGI 500 (977)
T ss_pred eEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCC-cccccCCCcccCCCccccCCCc
Q 002469 437 DRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGL-LSSLFGGSRKKNSKSSKKGSDK 515 (918)
Q Consensus 437 d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 515 (918)
|++|+|+|++++|||++|+|+||+|||+||||||+|||+||||++||..++.++.++ |++|||+.+++.....+. .
T Consensus 501 ~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 577 (977)
T PLN02195 501 DRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSE---I 577 (977)
T ss_pred CCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccccccccccccccccccccccccccccchh---h
Confidence 999999999999999999999999999999999999999999999987655555444 445666654332211000 0
Q ss_pred ccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhc
Q 002469 516 KKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVIS 595 (918)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~s 595 (918)
.+..++.+.+..++.++++++. .+++++.++++++++++||+|.+|++|++.+.+|.+...+.+++++||++|+|
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~s 652 (977)
T PLN02195 578 YRDAKREDLNAAIFNLREIDNY-----DEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVIS 652 (977)
T ss_pred cccccccccccccccccccccc-----chhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhc
Confidence 1111222233344444443321 23466778899999999999999999999999999998888999999999999
Q ss_pred cccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHHhhccccc
Q 002469 596 CGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPI 675 (918)
Q Consensus 596 cgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill~k~~PL 675 (918)
|+||++|+||+||||.|||+|||+.||++||++|||++|++|.+++|.|++|+|+.+++.||+||++|++|++++++||+
T Consensus 653 C~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl 732 (977)
T PLN02195 653 CGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPL 732 (977)
T ss_pred ccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCcc
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred ccccC-CCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 002469 676 WYGYG-GRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVG 754 (918)
Q Consensus 676 ~~g~~-~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~s~~~~~~fi~lfls~~~~~lLe~~wsg~s 754 (918)
++|+. ++|+++||++|+++++||++++++++|+++|++||++|++++|.++++++++|+++|+++++++++|++|+|.+
T Consensus 733 ~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~s 812 (977)
T PLN02195 733 WYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVS 812 (977)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 98764 78999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred cccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCCCcceeeeeccchhhHHHHHHHHHHHHHHHHH
Q 002469 755 IDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWTTLLIPPTTLLVINLVGVVAG 834 (918)
Q Consensus 755 i~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~~~~~l~~f~ws~l~iP~~~LlilnLvaiv~g 834 (918)
+++||||||||+|+++++|+||++++++|+|++++++|.||+|..+ +++++++|+|+|+++++|+++++++|++|+++|
T Consensus 813 i~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~d-d~~~~~~Y~f~~S~l~iP~ttl~ilNlvaiv~g 891 (977)
T PLN02195 813 IEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAAD-DTEFGELYMVKWTTLLIPPTSLLIINLVGVVAG 891 (977)
T ss_pred HHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceecccccc-ccchhcceeccceehhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887 557889999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhheeEecCCCCCCCCCC-ccc
Q 002469 835 VSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPD-VEQ 913 (918)
Q Consensus 835 i~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~~~P~~v~~~s~~l~~~f~~l~v~~~~~~~~~~~~~-~~~ 913 (918)
+++++.++++.||++++++++++|+++|+|||++|||||++|+|+||++||++|+++||+|||+||||+++++||+ +++
T Consensus 892 ~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v~s~ll~~~~~l~~v~~~~~~~~~~~~~~~~~ 971 (977)
T PLN02195 892 FSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVGKTDTTTLSNN 971 (977)
T ss_pred HHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHeeccccccCCCCCchhhc
Confidence 9999988888999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred c-CCCC
Q 002469 914 C-GINC 918 (918)
Q Consensus 914 ~-~~~~ 918 (918)
| |++|
T Consensus 972 ~~~~~~ 977 (977)
T PLN02195 972 CISIDC 977 (977)
T ss_pred cCCCCC
Confidence 9 9999
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=6.2e-245 Score=2148.60 Aligned_cols=858 Identities=78% Similarity=1.330 Sum_probs=802.1
Q ss_pred CCCcc-c--ccCCCCCCCCccccCCCCcCCCCCCCchhHHHhhHHHhhhhccccccccCCCccccCCCCCCCCCCCCCcc
Q 002469 8 PGKRI-H--YSGDINQSPSIRVVDPVREFGSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQATSERGGGDIDASTDVLVD 84 (918)
Q Consensus 8 ~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (918)
.|||| | |++ .++++|||+||++ ||||||+||.||++ . ++ + ++++++
T Consensus 179 ~~~~~~~~~~~~-----~~~~~~~~~~~~~--------wk~rv~~wk~~~~~------~-------~~-~----~~~~~~ 227 (1040)
T PLN02189 179 LHKRVHPYPVSE-----PGSAKWDEKKEGG--------WKERMDDWKMQQGN------L-------GP-D----PDDYDA 227 (1040)
T ss_pred ccCccCcccccC-----CCcccCCcccccc--------HHHHHHHHHhhccc------C-------CC-C----CCCCch
Confidence 46887 4 554 5568999999986 99999999999951 0 11 1 234568
Q ss_pred cccccccCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 002469 85 DSLLNDEARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWLP 164 (918)
Q Consensus 85 ~~~~~~~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~p 164 (918)
|+++++++++||+||+|++++.++|||++++++++++++||+||++|++.++.++|+++++||+||+|+|+|+|++||+|
T Consensus 228 d~~~~~~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~P 307 (1040)
T PLN02189 228 DMALIDEARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQFPKWFP 307 (1040)
T ss_pred hhhhcccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 88889999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred ccccchHhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhh
Q 002469 165 VNRETYLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSET 244 (918)
Q Consensus 165 i~r~~~~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~ 244 (918)
|+|+||+|||++||++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++||||||.||
T Consensus 308 v~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EA 387 (1040)
T PLN02189 308 IDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSET 387 (1040)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHH
Confidence 99999999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCC
Q 002469 245 SEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTP 324 (918)
Q Consensus 245 ~~fA~~WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~ 324 (918)
|+|||+||||||||||||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+++++++++|+++|.|+||++
T Consensus 388 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~ 467 (1040)
T PLN02189 388 AEFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTP 467 (1040)
T ss_pred HHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCc
Q 002469 325 WPGNNTRDHPGMIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINN 404 (918)
Q Consensus 325 w~~~~~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~ 404 (918)
|||++++|||+||||+++++|+.|.+|++||+|||||||||||++||+||||||+++||||++||||||||||||||+||
T Consensus 468 W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nn 547 (1040)
T PLN02189 468 WPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINN 547 (1040)
T ss_pred CCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCC
Q 002469 405 SKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPL 484 (918)
Q Consensus 405 ~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~ 484 (918)
|++||+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++||.
T Consensus 548 s~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~ 627 (1040)
T PLN02189 548 SKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPK 627 (1040)
T ss_pred hHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchh
Q 002469 485 KPKHRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSA 564 (918)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~ 564 (918)
..+.+..++|++|||..+.+.+..+... +.. .++.++ ++++++.++++++++++||+|.
T Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------------~~~~~~--~~~~~~~~~~~~~~~~~fG~S~ 686 (1040)
T PLN02189 628 GPKRPKMVTCDCCPCFGRRKKKHAKNGL-------NGE------------VAALGG--MESDKEMLMSQMNFEKKFGQSA 686 (1040)
T ss_pred ccccccccccchhhhccccccccccccc-------ccc------------cccccc--cchhhhhhhhhhhhHhhhccch
Confidence 6555555666555555443322111110 000 011111 3345566788999999999999
Q ss_pred HHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccc
Q 002469 565 VFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKG 644 (918)
Q Consensus 565 ~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G 644 (918)
+|++|++.+.+|.+..+..+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++|++|++++|.|
T Consensus 687 ~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~G 766 (1040)
T PLN02189 687 IFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKG 766 (1040)
T ss_pred hhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcC
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999988888999
Q ss_pred cCCCCHHHHHHHhhhhhcchhHHHhhcccccccccC-CCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccc
Q 002469 645 SAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYG-GRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMP 723 (918)
Q Consensus 645 ~aP~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~-~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip 723 (918)
++|+|+.+++.||+||++|++||+++++||+++|+. ++|+++||++|+++++||++++++++|+++|++||++|++++|
T Consensus 767 lAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p 846 (1040)
T PLN02189 767 SAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMP 846 (1040)
T ss_pred cCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 999999999999999999999999999999998763 6799999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCC
Q 002469 724 QISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG 803 (918)
Q Consensus 724 ~~s~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~ 803 (918)
.++++++.+|+++|+++++++++|++|+|+++++||||||||+|.++++++||++++++|+|++++++|.||+|..+ ++
T Consensus 847 ~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~-d~ 925 (1040)
T PLN02189 847 PISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATD-DD 925 (1040)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887 45
Q ss_pred CcceeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 002469 804 DFTELYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVV 883 (918)
Q Consensus 804 ~~~~l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~~~P~~v~~ 883 (918)
.++++|+|+|+++++|+++++++|++|+++|+++++.+++..|+++++++++++|+++|+|||++|||||++|+|+||++
T Consensus 926 ~~~~ly~f~~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v 1005 (1040)
T PLN02189 926 EFGELYAFKWTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVI 1005 (1040)
T ss_pred ccccceeecceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehH
Confidence 66799999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhheeEecCCCCCCCCCCccccCCCC
Q 002469 884 WSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 918 (918)
Q Consensus 884 ~s~~l~~~f~~l~v~~~~~~~~~~~~~~~~~~~~~ 918 (918)
||++|+++|++|||+||||+++++||.+++||++|
T Consensus 1006 ~s~ll~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~ 1040 (1040)
T PLN02189 1006 WSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGINC 1040 (1040)
T ss_pred HHHHHHHHHHHHHheecccccCCCCchhhccCcCC
Confidence 99999999999999999999999999999999999
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=3.4e-220 Score=1938.99 Aligned_cols=786 Identities=56% Similarity=1.041 Sum_probs=706.3
Q ss_pred cccccCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 002469 87 LLNDEARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWLPVN 166 (918)
Q Consensus 87 ~~~~~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pi~ 166 (918)
.+|+++++||+||++++++.++|||++++++++++++||.||++|++.++.|+|+++++||+||+|+|+|+|++||+||+
T Consensus 261 ~~~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~ 340 (1135)
T PLN02248 261 EFMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPIN 340 (1135)
T ss_pred cccccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 35899999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ccchHhHhhhhhccCCC-----CCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHh
Q 002469 167 RETYLDRLSLRYEREGE-----PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEAL 241 (918)
Q Consensus 167 r~~~~drL~~r~~~~~~-----~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l 241 (918)
|.||+|||++||+.|++ +++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++||||||
T Consensus 341 R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL 420 (1135)
T PLN02248 341 RATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAM 420 (1135)
T ss_pred cccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHH
Confidence 99999999999986543 5689999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhhhhHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhh-------------
Q 002469 242 SETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAK------------- 308 (918)
Q Consensus 242 ~E~~~fA~~WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~------------- 308 (918)
.||++|||+||||||||+|||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+|++.
T Consensus 421 ~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e 500 (1135)
T PLN02248 421 AEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREE 500 (1135)
T ss_pred HHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999641
Q ss_pred -----------------hccCCcccccccCCCCCCCC--------CCCCCccceEEEecCCC------------CCCCC-
Q 002469 309 -----------------AQKIPEEGWVMQDGTPWPGN--------NTRDHPGMIQVFLGENG------------GLDAE- 350 (918)
Q Consensus 309 -----------------~~~~p~~~w~m~dg~~w~~~--------~~rdhp~~iqv~l~~~g------------~~d~~- 350 (918)
++++|+++| |+|||+|||+ +++|||+||||+|++++ ..|.+
T Consensus 501 ~~~~~~~~~~~~~~~~e~~~~~~~~w-m~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~ 579 (1135)
T PLN02248 501 IKAKKKQRESGGGDPSEPLKVPKATW-MADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTD 579 (1135)
T ss_pred HHhhhhhhhhccccccccccccccee-eccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccc
Confidence 246788899 9999999997 46799999999998643 12322
Q ss_pred -CCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEec
Q 002469 351 -GNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQF 429 (918)
Q Consensus 351 -~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~ 429 (918)
+++||+||||||||||||+||+||||||+|+||||++||||||||||||||+|||++||+||||||||+ |+++|||||
T Consensus 580 ~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQF 658 (1135)
T PLN02248 580 VDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQF 658 (1135)
T ss_pred cccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcC
Confidence 348999999999999999999999999999999999999999999999999999999999999999997 999999999
Q ss_pred CccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCcc
Q 002469 430 PQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSS 509 (918)
Q Consensus 430 PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (918)
||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++||..++..+ +|++|| +.+.+.++.+
T Consensus 659 PQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~--~~~~~~-~~~~~~~~~~ 735 (1135)
T PLN02248 659 PQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSG--CFGSCK-FTKKKKKETS 735 (1135)
T ss_pred CcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccc--cccccc-cccccccccc
Confidence 9999999999999999999999999999999999999999999999999999986533222 233333 3222211100
Q ss_pred ccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhc---------CCCC--
Q 002469 510 KKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMEN---------GGVP-- 578 (918)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~---------GG~~-- 578 (918)
.. . .. ..+++++ ++ .++.+.++++||+|..|++|+..+. ++.+
T Consensus 736 ~~---------~---~~---~~~~~~~-------~~----~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~ 789 (1135)
T PLN02248 736 AS---------E---PE---EQPDLED-------DD----DLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNG 789 (1135)
T ss_pred cc---------c---cc---ccccccc-------cc----hhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccc
Confidence 00 0 00 0111110 00 1345678899999999999996432 2111
Q ss_pred ---------CCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCC
Q 002469 579 ---------QSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPIN 649 (918)
Q Consensus 579 ---------~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~t 649 (918)
.....+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|++++|.|++|+|
T Consensus 790 ~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~ 869 (1135)
T PLN02248 790 RPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPIN 869 (1135)
T ss_pred cccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCC
Confidence 11234689999999999999999999999999999999999999999999999999988888899999999
Q ss_pred HHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccchhHH
Q 002469 650 LSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLA 729 (918)
Q Consensus 650 l~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~s~~~ 729 (918)
+.++++||+||++|++||++++++|+++ .++|++.||++|+++++||++++++++|+++|++||++|++++|+.+..+
T Consensus 870 L~d~L~Qr~RWA~G~lQIf~sr~~Pll~--~~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~~~f 947 (1135)
T PLN02248 870 LTDRLHQVLRWATGSVEIFFSRNNALLA--SRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTF 947 (1135)
T ss_pred HHHHHHHHHHHhhchHHHHhccCCcccc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccHHH
Confidence 9999999999999999999999999985 47899999999999999999999999999999999999999999876555
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCC--CCcce
Q 002469 730 SIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDED--GDFTE 807 (918)
Q Consensus 730 ~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d--~~~~~ 807 (918)
+++++.++++++++.+++++|+|+++++|||+||||+|.+++++++|++++++|+|++++++|.||+|..+.+ ..+++
T Consensus 948 l~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~a~ 1027 (1135)
T PLN02248 948 LVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFAD 1027 (1135)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccccccccch
Confidence 5555566788899999999999999999999999999999999999999999999999999999999988643 24678
Q ss_pred eeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH
Q 002469 808 LYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSIL 887 (918)
Q Consensus 808 l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~~~P~~v~~~s~~ 887 (918)
+|+|+|+++++|+++++++|++|+++|++|++.+.++.|+.+++++++++|+++|+|||++|||||++|+|+||++||++
T Consensus 1028 ly~f~wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P~iv~v~s~l 1107 (1135)
T PLN02248 1028 LYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGL 1107 (1135)
T ss_pred heecCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeehHHHHHH
Confidence 99999999999999999999999999999998877777889999999999999999999999999999999999999999
Q ss_pred HHHHHHhheeEecCCCCC
Q 002469 888 LASIFSLLWVRVDPFTTR 905 (918)
Q Consensus 888 l~~~f~~l~v~~~~~~~~ 905 (918)
++++++||||+|+||...
T Consensus 1108 l~~~~sll~v~~~~~~~~ 1125 (1135)
T PLN02248 1108 LSITISLLWVAISPPSGA 1125 (1135)
T ss_pred HHHHHHHHheEeccccCc
Confidence 999999999999999854
No 8
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.1e-215 Score=1851.83 Aligned_cols=719 Identities=71% Similarity=1.260 Sum_probs=686.5
Q ss_pred eeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchhhh
Q 002469 190 VDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYF 269 (918)
Q Consensus 190 VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~yf 269 (918)
|||||||+||.||||++|+|||||+||+|||+|||+|||||||++++|||||.||++|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCCCC
Q 002469 270 AQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGLDA 349 (918)
Q Consensus 270 ~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~d~ 349 (918)
+++.|+++++.+|+|++||++|||+|||||+|||+++++.+++|+++|+|+||++|||++++|||+||||+++++|+.|+
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~ 160 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDV 160 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEec
Q 002469 350 EGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQF 429 (918)
Q Consensus 350 ~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~ 429 (918)
+|++||+||||||||||+|+||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|||||
T Consensus 161 ~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQf 240 (720)
T PF03552_consen 161 DGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQF 240 (720)
T ss_pred ccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCcc
Q 002469 430 PQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSS 509 (918)
Q Consensus 430 PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (918)
||+|+|+|++|+|+|++++||+++|+|+||+|||+||||||+|||+||||++||...+..+.+||++|||.+++|+++.+
T Consensus 241 pq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~ 320 (720)
T PF03552_consen 241 PQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSK 320 (720)
T ss_pred CceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999988887777775444444443333222
Q ss_pred ccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHH
Q 002469 510 KKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKE 589 (918)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~ 589 (918)
++. +++..++.+++.+.+++++++|+.++ .+++++..+++++++++||+|++|++|+..+.|+.+.+.+++++|+|
T Consensus 321 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~E 396 (720)
T PF03552_consen 321 KKP--KKRASKRRESSSPIFALEDIEEGAEG--SDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEE 396 (720)
T ss_pred ccc--hhcccccccccccccccccccccccc--chhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHH
Confidence 211 12334567788899999999998776 77888999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHHh
Q 002469 590 AIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILF 669 (918)
Q Consensus 590 a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill 669 (918)
|+||+||+||++|+||+||||.|||+|||+.||++||++||||+||+|+++||.|.||+|+.+.+.|++||+.|++||++
T Consensus 397 A~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~f 476 (720)
T PF03552_consen 397 AIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFF 476 (720)
T ss_pred HHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 002469 670 SRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMR 749 (918)
Q Consensus 670 ~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~s~~~~~~fi~lfls~~~~~lLe~~ 749 (918)
+|+||+|+|+.++|+++||++|++.++|+++++|.++|+++|++||++|++++|++++.++++|+++|+++++++++|++
T Consensus 477 Sr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~ 556 (720)
T PF03552_consen 477 SRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFR 556 (720)
T ss_pred hcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999877899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCC-CCCcceeeeeccchhhHHHHHHHHHHH
Q 002469 750 WSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDE-DGDFTELYMFKWTTLLIPPTTLLVINL 828 (918)
Q Consensus 750 wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~-d~~~~~l~~f~ws~l~iP~~~LlilnL 828 (918)
|+|.++++||||||||+|.++++|+||++++++|+|++++++|.||+|..++ ++++.++|.|+|+++++|+++|+++|+
T Consensus 557 wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~ely~f~wS~LfiP~tTllilNL 636 (720)
T PF03552_consen 557 WSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYAELYIFKWSPLFIPPTTLLILNL 636 (720)
T ss_pred hccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccccccccccccccchhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999873 455788999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHhheeEecCCCCCCCC
Q 002469 829 VGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTG 908 (918)
Q Consensus 829 vaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~~~P~~v~~~s~~l~~~f~~l~v~~~~~~~~~~~ 908 (918)
+|+++|+++++++++++|+++++++++++|+++|+|||++|||||++|+|+||++||++||++|++|||+||||+++++|
T Consensus 637 va~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~r~P~~v~v~S~lla~i~~llwv~i~~~~~~~~~ 716 (720)
T PF03552_consen 637 VAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKDRIPTSVIVWSVLLASIFSLLWVRIDPFLAKTTG 716 (720)
T ss_pred HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccCCcceeehHHHHHHHHHHHHHheecccCcCCCCC
Confidence 99999999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcc
Q 002469 909 PDVE 912 (918)
Q Consensus 909 ~~~~ 912 (918)
|+++
T Consensus 717 ~~~~ 720 (720)
T PF03552_consen 717 PDLK 720 (720)
T ss_pred CCCC
Confidence 9875
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.3e-196 Score=1699.25 Aligned_cols=727 Identities=35% Similarity=0.641 Sum_probs=656.3
Q ss_pred cCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhccccccccccch
Q 002469 91 EARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNAIALWLISVICEIWFAISWIFDQFPKWLPVNRETY 170 (918)
Q Consensus 91 ~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~~ 170 (918)
.+..||+++++++++. ||++.++++++++.|++||++++++++ ++|+++++||+||+|+|+|+|++||+|++|.|+
T Consensus 6 ~~~~pL~~~~~~~~~~---~r~~~~~vl~~~~~~l~~R~~~~~~~~-~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~~ 81 (756)
T PLN02190 6 SSLPPLCERISHKSYF---LRAVDLTILGLLFSLLLYRILHMSEND-TVWLVAFLCESCFSFVWLLITCIKWSPAEYKPY 81 (756)
T ss_pred CCCCCceeeeeccchh---HHHHHHHHHHHHHHHHHHHHhCCCccc-HHHHHHHHHHHHHHHHHHHhccceeeecCCCCC
Confidence 3457999999999984 999999999999999999999999887 689999999999999999999999999999999
Q ss_pred HhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhh
Q 002469 171 LDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARK 250 (918)
Q Consensus 171 ~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~ 250 (918)
+|||++|++ +||+||||||||||.||||++|+|||||+||+|||+||++|||||||++++|||||.|||+|||+
T Consensus 82 p~~l~~r~~------~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~ 155 (756)
T PLN02190 82 PDRLDERVH------DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKI 155 (756)
T ss_pred cHHHHHhhc------cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhh
Confidence 999999983 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCC--CCCCCC
Q 002469 251 WVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDG--TPWPGN 328 (918)
Q Consensus 251 WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg--~~w~~~ 328 (918)
||||||||||||||||+||+.+.+ ++.+++|++||++|||||||||+||++.. +...|.++|+ .+|+++
T Consensus 156 WvPFCrK~~IepRaPe~YF~~~~~---~~~~~~f~~e~~~~K~eYee~k~ri~~a~------~~~~~~~~~~~~~~~~~~ 226 (756)
T PLN02190 156 WVPFCKKYNVRVRAPFRYFLNPPV---ATEDSEFSKDWEMTKREYEKLSRKVEDAT------GDSHWLDAEDDFEAFSNT 226 (756)
T ss_pred hcccccccCCCcCCHHHHhcCCCC---CCCCchhHHHHHHHHHHHHHHHHHHHhhc------cCCCCcccCCcccccCCC
Confidence 999999999999999999998643 33458999999999999999999999864 3566777665 689999
Q ss_pred CCCCCccceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHH
Q 002469 329 NTRDHPGMIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKAL 408 (918)
Q Consensus 329 ~~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~L 408 (918)
+++|||+||||+++++|+ +.+|++||+||||||||||+++||+||||||+++||||++||||||||||||||+|||+++
T Consensus 227 ~~~dH~~iiqVll~~~~~-~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~ 305 (756)
T PLN02190 227 KPNDHSTIVKVVWENKGG-VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVV 305 (756)
T ss_pred CCCCCccceEEEecCCCC-ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHH
Confidence 999999999999999775 4578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCC-ceEEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCC
Q 002469 409 REAMCFMMDPNLG-KHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPK 487 (918)
Q Consensus 409 r~am~ff~Dp~~g-~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~ 487 (918)
|+||||||||+.+ +++|||||||+|+ |+|+|++++|||++|+|+||+|||+|+||||+|||+||||++||...+
T Consensus 306 r~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~ 380 (756)
T PLN02190 306 RQAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLED 380 (756)
T ss_pred HHhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccc
Confidence 9999999999744 5899999999997 789999999999999999999999999999999999999998874321
Q ss_pred CCCCCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHH
Q 002469 488 HRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFV 567 (918)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~ 567 (918)
... . .. ..+++ ..++.+++++||+|+.|+
T Consensus 381 ~~~--------------------------~---~~---------------------~~~~~-~~~~~~~~~~fg~s~~f~ 409 (756)
T PLN02190 381 DGS--------------------------L---SS---------------------VATRE-FLAEDSLAREFGNSKEMV 409 (756)
T ss_pred ccc--------------------------c---cc---------------------ccccc-ccchhhhhhhcCCcHHHH
Confidence 100 0 00 00011 234556788999999999
Q ss_pred HhHhhhcCCCCC-CcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccC
Q 002469 568 ASTLMENGGVPQ-SATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSA 646 (918)
Q Consensus 568 ~S~l~e~GG~~~-~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~a 646 (918)
+|+..+.-+-+. ..+.+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|+++||.|.+
T Consensus 410 ~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~a 489 (756)
T PLN02190 410 KSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSM 489 (756)
T ss_pred HHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcC
Confidence 999876533222 3345789999999999999999999999999999999999999999999999999999998999999
Q ss_pred CCCHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccch
Q 002469 647 PINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQIS 726 (918)
Q Consensus 647 P~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~s 726 (918)
|+++.+.+.||+||++|++|++++++||++++..++|++.||++|++.++ |++++|+++|+++|++||++|++++|..
T Consensus 490 P~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~- 567 (756)
T PLN02190 490 PPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG- 567 (756)
T ss_pred CCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc-
Confidence 99999999999999999999999999999976668999999999999988 9999999999999999999999999965
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCC------
Q 002469 727 NLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASD------ 800 (918)
Q Consensus 727 ~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~------ 800 (918)
.++.+++.+++++++++++|++|+|.++++||||||||+|.++|+|+||++++++|+|+++++.|+||+|..+
T Consensus 568 -~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~ 646 (756)
T PLN02190 568 -VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGS 646 (756)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeecccccccccc
Confidence 4566777888899999999999999999999999999999999999999999999999999999999999653
Q ss_pred -------C-CCCc--ceeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCchhHhHHHHHHHHHHHHHHH
Q 002469 801 -------E-DGDF--TELYMFKWTTLLIPPTTLLVINLVGVVAGVSYAINS---GYQSWGPLFGKLFFAFWVIVHLYPFL 867 (918)
Q Consensus 801 -------~-d~~~--~~l~~f~ws~l~iP~~~LlilnLvaiv~gi~r~~~~---~~~~~~~l~~~l~~~~Wvv~nl~p~l 867 (918)
+ +..+ +++|+|+|+++++|.++++++|++|++.|+++++.+ ..+.|+ .++++++++|+++|++||+
T Consensus 647 ~~~~~~~~~~~~~~~~~~f~f~~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~-~l~q~~~~~~vv~~~~P~~ 725 (756)
T PLN02190 647 GSGPSQGEDDGPNSDSGKFEFDGSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGS-GLAEACGCILVVMLFLPFL 725 (756)
T ss_pred ccccccccccchhhhcceeEecceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccc-cHHHHHHHHHHHHHHHHHH
Confidence 1 1112 578999999999999999999999999998877542 223344 4599999999999999999
Q ss_pred HHhhcCC-CCCchhHHHHHHHHHHHHHhhee
Q 002469 868 KGLMGRQ-NRTPTIVVVWSILLASIFSLLWV 897 (918)
Q Consensus 868 ~aL~gR~-~~~P~~v~~~s~~l~~~f~~l~v 897 (918)
+||++|+ ++||.+|+++|++|+.+|+++.|
T Consensus 726 ~gl~~kdkg~iP~s~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 726 KGLFEKGKYGIPLSTLSKAAFLAVLFVVFSV 756 (756)
T ss_pred HHHhcCCCCCCChhHHHHHHHHHHHHHhccC
Confidence 9999765 59999999999999999999865
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=7.4e-189 Score=1642.27 Aligned_cols=707 Identities=37% Similarity=0.706 Sum_probs=649.9
Q ss_pred cCCCCCeeeeecCCCCCchhHHHHHHHHHHHHHHHHHHhccccchh-HHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 002469 91 EARQPLSRKVPIPSSRINPYRMVIFLRLIILGIFLYYRIKNPVHNA-IALWLISVICEIWFAISWIFDQFPKWLPVNRET 169 (918)
Q Consensus 91 ~~~~pl~~~~~~~~~~~~~~R~~i~~~l~~~~~yl~wR~~~~~~~~-~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~ 169 (918)
...+||+++++++++. +||+++++++++++++|+||+++...+. .++|+++++||+||+|+|+|+|++||+|++|+|
T Consensus 9 ~~~~pL~~~~~~~~~~--~~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~ 86 (734)
T PLN02893 9 TGAPPLHTCHPMRRTI--ANRVFAVVYSCAILALLYHHVIALLHSTTTLITLLLLLADIVLAFMWATTQAFRMCPVHRRV 86 (734)
T ss_pred CCCCCceeeeecCCch--HHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 3556999999988874 5999999999999999999999977654 789999999999999999999999999999999
Q ss_pred hHhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhh
Q 002469 170 YLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAR 249 (918)
Q Consensus 170 ~~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~ 249 (918)
|+|||+++++ .++||+|||||||+||.||||++|+|||||+||+|||+||++|||||||+|++|||||.|||+|||
T Consensus 87 ~~~~L~~~~~----~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~ 162 (734)
T PLN02893 87 FIEHLEHYAK----ESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFAT 162 (734)
T ss_pred CHHHHhhhcc----cccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHH
Confidence 9999997764 478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCC-----CC
Q 002469 250 KWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDG-----TP 324 (918)
Q Consensus 250 ~WvpfCkk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg-----~~ 324 (918)
+||||||||||||||||+||+++ +++|++||+.|||||||||+|||+++++ +++|++ |.+.++ +.
T Consensus 163 ~WvPFCrk~~ie~R~P~~YF~~~--------~~~~~~e~~~~k~~Yee~k~ri~~~~~~-~~~~~~-~~~~~~~~~~f~~ 232 (734)
T PLN02893 163 HWLPFCKKNKIVERCPEAYFSSN--------SHSWSPETEQIKMMYESMKVRVENVVER-GKVSTD-YITCDQEREAFSR 232 (734)
T ss_pred hhcccccccCCCcCCHHHHhccC--------CCccchHHHHHHHHHHHHHHHHHHHHhc-CcCchh-hhhhccccccccc
Confidence 99999999999999999999997 2567899999999999999999999977 889887 655443 78
Q ss_pred CCCCC-CCCCccceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCC
Q 002469 325 WPGNN-TRDHPGMIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 403 (918)
Q Consensus 325 w~~~~-~rdhp~~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~ 403 (918)
|++|+ ++|||+||||+++++++.|.+|+++|+|||||||||||++||+||||||+++||||++||||||||||||||+|
T Consensus 233 w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n 312 (734)
T PLN02893 233 WTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSN 312 (734)
T ss_pred CcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCC
Confidence 98775 78999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCC
Q 002469 404 NSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 483 (918)
Q Consensus 404 ~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~ 483 (918)
||++|++|||||+||+.++++|||||||+|+|++++|+|+|++++||+++|+|+||+|||+||||||+|||+||||..+.
T Consensus 313 ~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~ 392 (734)
T PLN02893 313 DPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS 392 (734)
T ss_pred chhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997321
Q ss_pred CCCCCCCCCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCch
Q 002469 484 LKPKHRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 563 (918)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s 563 (918)
.. .+++++ +++
T Consensus 393 ~~---------------------------------------------~~~~~~-----------------------~~~- 403 (734)
T PLN02893 393 LI---------------------------------------------LPEIPE-----------------------LNP- 403 (734)
T ss_pred cc---------------------------------------------chhhhh-----------------------ccc-
Confidence 00 000000 010
Q ss_pred hHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCccc
Q 002469 564 AVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFK 643 (918)
Q Consensus 564 ~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~ 643 (918)
.++...+....+++++|++|+||+||++|.||+||||.|+|+|||+.||++||++|||++|++|+++++.
T Consensus 404 ----------~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~ 473 (734)
T PLN02893 404 ----------DHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFL 473 (734)
T ss_pred ----------ccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhc
Confidence 1122334556779999999999999999999999999999999999999999999999999998877889
Q ss_pred ccCCCCHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccc
Q 002469 644 GSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMP 723 (918)
Q Consensus 644 G~aP~tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip 723 (918)
|++|+|+.++++||+||++|++|++++++||+++|. ++|++.||++|++.++||++++++++|+++|++||++|++++|
T Consensus 474 G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~-~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p 552 (734)
T PLN02893 474 GDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGV-KSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFP 552 (734)
T ss_pred cCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcc-cCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccc
Confidence 999999999999999999999999999999999764 7899999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCC
Q 002469 724 QISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG 803 (918)
Q Consensus 724 ~~s~~~~~~fi~lfls~~~~~lLe~~wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~ 803 (918)
+.+.+++++++.+++++++++++|++|+|.++++|||+||+|+|.++++++++++++++|.|++++.+|+||+|+.+.+.
T Consensus 553 ~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~ 632 (734)
T PLN02893 553 KASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQ 632 (734)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCccccc
Confidence 99888888888899999999999999999999999999999999999999999999999999999999999999976432
Q ss_pred C--c-ceeeeecc-chhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHhhcCCC--CC
Q 002469 804 D--F-TELYMFKW-TTLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQN--RT 877 (918)
Q Consensus 804 ~--~-~~l~~f~w-s~l~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL~gR~~--~~ 877 (918)
. + .++|+|+| +++++|+++++++|++|+++|+++++.++ .|+.+++++++++|+++|++||++||++|++ |+
T Consensus 633 ~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~--~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~ 710 (734)
T PLN02893 633 SKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQR--NLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKL 710 (734)
T ss_pred ccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCC--chhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 2 3 47899995 99999999999999999999999998753 4677889999999999999999999999986 99
Q ss_pred chhHHHHHHHHHHHHHhh
Q 002469 878 PTIVVVWSILLASIFSLL 895 (918)
Q Consensus 878 P~~v~~~s~~l~~~f~~l 895 (918)
|++|++||++||.++.++
T Consensus 711 P~~v~~~s~~l~~~~~~~ 728 (734)
T PLN02893 711 PVKITLISIVLAWALYLA 728 (734)
T ss_pred CccHHHHHHHHHHHHHHH
Confidence 999999999999887764
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=2e-68 Score=641.99 Aligned_cols=495 Identities=25% Similarity=0.404 Sum_probs=388.9
Q ss_pred HH-HHHHHHHHHHHHHHHHhccccchh----HHHHHHHHHHHHHHHHHHHHhhccccccccccchHhHhhhhhccCCCCC
Q 002469 111 RM-VIFLRLIILGIFLYYRIKNPVHNA----IALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYEREGEPS 185 (918)
Q Consensus 111 R~-~i~~~l~~~~~yl~wR~~~~~~~~----~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~~~drL~~r~~~~~~~~ 185 (918)
|+ ++++.+++.++|++||++.+++.. ..+.++++++|+++.++.++..+..+.|.+|.+. ..+.+++
T Consensus 57 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~--------~~~~~~~ 128 (713)
T TIGR03030 57 RLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPV--------PLPLDPE 128 (713)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc--------CCCCCcc
Confidence 55 566667779999999999877642 4567889999999999988888888888877542 1233457
Q ss_pred CCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCc
Q 002469 186 QLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAP 265 (918)
Q Consensus 186 ~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraP 265 (918)
.+|+|||+||||| |++.++.+|+.+++++|||.||+.|||+|||+++-|.....+.
T Consensus 129 ~~P~VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~--------------------- 184 (713)
T TIGR03030 129 EWPTVDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPE--------------------- 184 (713)
T ss_pred cCCeeEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhh---------------------
Confidence 7999999999999 9999999999999999999999999999999987432211110
Q ss_pred hhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCC
Q 002469 266 EWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENG 345 (918)
Q Consensus 266 e~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g 345 (918)
.+|. ++..++++ +++++
T Consensus 185 -------------------~~~~---~~~~~~~~----~l~~~------------------------------------- 201 (713)
T TIGR03030 185 -------------------QAEA---AQRREELK----EFCRK------------------------------------- 201 (713)
T ss_pred -------------------hhhh---hhhHHHHH----HHHHH-------------------------------------
Confidence 0000 00111222 23211
Q ss_pred CCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCceE
Q 002469 346 GLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKHV 424 (918)
Q Consensus 346 ~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~~g~~v 424 (918)
.++.|+.|++ |+|+||||||++++. ++||||+++||||+ ++|++|++++++| .|| ++
T Consensus 202 ---------~~v~yi~r~~----n~~~KAgnLN~al~~----a~gd~Il~lDAD~v-~~pd~L~~~v~~f~~dp----~v 259 (713)
T TIGR03030 202 ---------LGVNYITRPR----NVHAKAGNINNALKH----TDGELILIFDADHV-PTRDFLQRTVGWFVEDP----KL 259 (713)
T ss_pred ---------cCcEEEECCC----CCCCChHHHHHHHHh----cCCCEEEEECCCCC-cChhHHHHHHHHHHhCC----CE
Confidence 0278999987 789999999999996 89999999999995 7899999999988 588 89
Q ss_pred EEEecCccccCCCcc-------ccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccc
Q 002469 425 CYVQFPQRFDGIDRN-------DRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSL 497 (918)
Q Consensus 425 a~VQ~PQ~F~n~d~~-------d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~ 497 (918)
++||+||.|+|.|+. +++.+++..||+.+++|+|.++++++|||++++||+||
T Consensus 260 ~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al-------------------- 319 (713)
T TIGR03030 260 FLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREAL-------------------- 319 (713)
T ss_pred EEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHH--------------------
Confidence 999999999998753 34567888999999999999999999999999999887
Q ss_pred cCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCC
Q 002469 498 FGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGV 577 (918)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~ 577 (918)
+++||+
T Consensus 320 --------------------------------------------------------------------------~~iGGf 325 (713)
T TIGR03030 320 --------------------------------------------------------------------------DEIGGI 325 (713)
T ss_pred --------------------------------------------------------------------------HHcCCC
Confidence 356776
Q ss_pred CCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHh
Q 002469 578 PQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQV 657 (918)
Q Consensus 578 ~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR 657 (918)
++ ++++||++++++|+++||+++|+++.. ++|++|+|++++++||
T Consensus 326 ~~---------------------------------~~vtED~~l~~rL~~~G~~~~y~~~~~--~~g~~p~sl~~~~~Qr 370 (713)
T TIGR03030 326 AG---------------------------------ETVTEDAETALKLHRRGWNSAYLDRPL--IAGLAPETLSGHIGQR 370 (713)
T ss_pred CC---------------------------------CCcCcHHHHHHHHHHcCCeEEEecccc--ccccCCCCHHHHHHHH
Confidence 54 689999999999999999999997654 5899999999999999
Q ss_pred hhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHH
Q 002469 658 LRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLF 737 (918)
Q Consensus 658 ~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~s~~~~~~fi~lf 737 (918)
.||++|++|+++. .+|++ .+++++.||++|+++++||+.++++++|+++|++++++|+.++++..... +..+
T Consensus 371 ~RWa~G~~qi~~~-~~pl~---~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~~----~~~~ 442 (713)
T TIGR03030 371 IRWAQGMMQIFRL-DNPLL---KRGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVASALEI----LAYA 442 (713)
T ss_pred HHHhcChHHHHhh-hCccc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCCHHHH----HHHH
Confidence 9999999999975 58998 68999999999999999999999999999999999999999997643221 2223
Q ss_pred HHHHHHHHHHhh-ccccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCCCcceeeeeccchh
Q 002469 738 LSIFATGILEMR-WSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWTTL 816 (918)
Q Consensus 738 ls~~~~~lLe~~-wsg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~~~~~l~~f~ws~l 816 (918)
+++++.+++.+. ..|.....||++ .+..+ ...+.+...+.+.+++++.+|+|||||+..++.+ + +++
T Consensus 443 lp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~~-----~--~~~ 510 (713)
T TIGR03030 443 LPHMLHSLLTNSYLFGRVRWPFWSE----VYETV-LAVYLLPPVLVTLLNPKKPKFNVTPKGELLDEDY-----F--SPL 510 (713)
T ss_pred HHHHHHHHHHHHHHcCCeecchHHH----HHHHH-HHHHHHHHHHHHHhCcCCCCceecCCCccccccc-----c--chH
Confidence 455555555533 334444566753 22333 3334445556667889999999999998754332 2 258
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHh---hcCCC
Q 002469 817 LIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL---MGRQN 875 (918)
Q Consensus 817 ~iP~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL---~gR~~ 875 (918)
++|+++++++|++|+++|+++...++. ...+.+++.+|.++|++.+..++ .+|++
T Consensus 511 ~~p~~~l~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~Q 568 (713)
T TIGR03030 511 SRPYLILFALILAGLAFGLYRIYGYPI----ERGVLLVVLGWNLLNLILLGAALAVVAERRQ 568 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcc----ccchhhHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999864332 23456899999999999888777 35553
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-68 Score=642.52 Aligned_cols=478 Identities=26% Similarity=0.433 Sum_probs=380.1
Q ss_pred HHHHHHHHHHHHHHHHHhccccch----hHHHHHHHHHHHHHHHHHHHHhhccccccccccchHhHhhhhhccCCCCCCC
Q 002469 112 MVIFLRLIILGIFLYYRIKNPVHN----AIALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYEREGEPSQL 187 (918)
Q Consensus 112 ~~i~~~l~~~~~yl~wR~~~~~~~----~~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~~~drL~~r~~~~~~~~~l 187 (918)
+++++.+++.++|++||++.+++. +..+.++++++|+++.++.++..+..+.|..|.+. +.+...+.+
T Consensus 188 ~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--------~~~~~~~~~ 259 (852)
T PRK11498 188 MLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--------PLPKDMSLW 259 (852)
T ss_pred HHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--------CCCcccCCC
Confidence 356778888999999999987763 35567889999999999888888888888877532 123335678
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchh
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~ 267 (918)
|+|||+||||| ||..++++|+.+++++|||.+|+.|||+|||+++- +.
T Consensus 260 P~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~-------t~---------------------- 307 (852)
T PRK11498 260 PTVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREE-------FR---------------------- 307 (852)
T ss_pred CcEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChH-------HH----------------------
Confidence 99999999999 99999999999999999999999999999999761 10
Q ss_pred hhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCC
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~ 347 (918)
++ +++
T Consensus 308 -----------------------------~l-------a~~--------------------------------------- 312 (852)
T PRK11498 308 -----------------------------QF-------AQE--------------------------------------- 312 (852)
T ss_pred -----------------------------HH-------HHH---------------------------------------
Confidence 11 100
Q ss_pred CCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHh-hcCCCCCceEEE
Q 002469 348 DAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCF-MMDPNLGKHVCY 426 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~f-f~Dp~~g~~va~ 426 (918)
.++.|++|++ |.|+||||+|++++. ++||||+++|||| ++++++|+++|++ +.|| ++|+
T Consensus 313 -------~~v~yI~R~~----n~~gKAGnLN~aL~~----a~GEyIavlDAD~-ip~pdfL~~~V~~f~~dP----~Vgl 372 (852)
T PRK11498 313 -------VGVKYIARPT----HEHAKAGNINNALKY----AKGEFVAIFDCDH-VPTRSFLQMTMGWFLKDK----KLAM 372 (852)
T ss_pred -------CCcEEEEeCC----CCcchHHHHHHHHHh----CCCCEEEEECCCC-CCChHHHHHHHHHHHhCC----CeEE
Confidence 0267998876 778999999999996 7999999999999 5899999999986 5799 8999
Q ss_pred EecCccccCCCccc-------cccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccC
Q 002469 427 VQFPQRFDGIDRND-------RYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFG 499 (918)
Q Consensus 427 VQ~PQ~F~n~d~~d-------~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~ 499 (918)
||+||.|+|.|+.+ .+.++++.||+.+++|+|.++++++|||++++||+||
T Consensus 373 VQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaL---------------------- 430 (852)
T PRK11498 373 MQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPL---------------------- 430 (852)
T ss_pred EEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHH----------------------
Confidence 99999999987643 2457788999999999999999999999999999877
Q ss_pred CCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCC
Q 002469 500 GSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQ 579 (918)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~ 579 (918)
+|+||+++
T Consensus 431 ------------------------------------------------------------------------eeVGGfd~ 438 (852)
T PRK11498 431 ------------------------------------------------------------------------DEIGGIAV 438 (852)
T ss_pred ------------------------------------------------------------------------HHhcCCCC
Confidence 36788765
Q ss_pred CcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhh
Q 002469 580 SATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR 659 (918)
Q Consensus 580 ~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~R 659 (918)
++++||++++++|+++||+++|+++.. +.|++|+|++++++||.|
T Consensus 439 ---------------------------------~titED~dlslRL~~~Gyrv~yl~~~~--a~glaPesl~~~~~QR~R 483 (852)
T PRK11498 439 ---------------------------------ETVTEDAHTSLRLHRRGYTSAYMRIPQ--AAGLATESLSAHIGQRIR 483 (852)
T ss_pred ---------------------------------CccCccHHHHHHHHHcCCEEEEEeccc--eeEECCCCHHHHHHHHHH
Confidence 589999999999999999999997654 489999999999999999
Q ss_pred hhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHH
Q 002469 660 WALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLS 739 (918)
Q Consensus 660 Wa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~iip~~s~~~~~~fi~lfls 739 (918)
|++|++|+++ +++|++ ++++++.||++|+++++|++.+++.++|+++|++|+++|+.++.+..... +..+++
T Consensus 484 WarG~lQi~r-~~~pl~---~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a~~~~i----~~y~lP 555 (852)
T PRK11498 484 WARGMVQIFR-LDNPLT---GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMI----ALFVLP 555 (852)
T ss_pred HHHHHHHHHH-HhChhc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeCChHHH----HHHHHH
Confidence 9999999997 478997 78999999999999999999999999999999999999999885432211 122244
Q ss_pred HHHHHHHHhhc-cccccccccccchhhhhhhhHHHHHHHHHHHHHHHcCCCCCceeccCCCCCCCCcceeeeeccchhhH
Q 002469 740 IFATGILEMRW-SGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWTTLLI 818 (918)
Q Consensus 740 ~~~~~lLe~~w-sg~si~~wWr~q~~W~i~~vs~~lfav~~allk~L~g~~~~F~VTpKg~~~d~~~~~l~~f~ws~l~i 818 (918)
+++...+...| +|.....||++ ++..+.++.++ ...+...+++++.+|+||+||+..++.. |+|. ++.
T Consensus 556 ~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l~-~~~~~~ll~p~~~~F~VTpKg~~~~~~~-----~~~~-~~~ 624 (852)
T PRK11498 556 HMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYIA-PPTTVALFNPHKGKFNVTAKGGLVEEEY-----VDWV-ISR 624 (852)
T ss_pred HHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHHH-HHHHHHHcCccCCCcccCCCCccccccc-----eehH-HHH
Confidence 44444444333 23322333431 24444444433 3344457789999999999998754432 4564 678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHhHHHHHHHHHHHHHHHHHh---hcCCC
Q 002469 819 PPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL---MGRQN 875 (918)
Q Consensus 819 P~~~LlilnLvaiv~gi~r~~~~~~~~~~~l~~~l~~~~Wvv~nl~p~l~aL---~gR~~ 875 (918)
|+++++++|++|+++|+++...+.. ....+.+++++|+++|++.+..++ ++|++
T Consensus 625 P~~~L~~L~l~gl~~g~~r~~~~~~---~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~ 681 (852)
T PRK11498 625 PYIFLVLLNLVGVAVGIWRYFYGPP---NEILTVIVSLVWVFYNLIILGGAVAVSVESKQ 681 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCc---ccchhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999875432 223456799999999999887777 35543
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=3.4e-36 Score=359.45 Aligned_cols=362 Identities=17% Similarity=0.196 Sum_probs=246.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccccchh---------HHHHHHHHHHHHHHHHHHHHhhccccccccccchHhHhhhhhc
Q 002469 109 PYRMVIFLRLIILGIFLYYRIKNPVHNA---------IALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYE 179 (918)
Q Consensus 109 ~~R~~i~~~l~~~~~yl~wR~~~~~~~~---------~~~wl~~~~~E~~~~~~wil~~~~~w~pi~r~~~~drL~~r~~ 179 (918)
..|++++...++...|..|+....+... ..+-.+++..+.+.+.+-++..+.... .|... .+...-.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~--~~~~~~~ 115 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKY--SISASAA 115 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcc--cCCcccc
Confidence 4677777888889999999987654321 112223334444444444444332211 11111 0100000
Q ss_pred cCCCCCCCcceeEEEecCCCCCCCHHHH----HHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHH
Q 002469 180 REGEPSQLAAVDIFVSTVDPLKEPPLVT----ANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFC 255 (918)
Q Consensus 180 ~~~~~~~lp~VDvfV~t~dp~kEp~~v~----~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfC 255 (918)
.+......|.|+|+||+|| |++..+ ..|+.|+.+.||| +++.+||+|||.++-+-.
T Consensus 116 ~~~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~---------------- 175 (691)
T PRK05454 116 GDPPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAA---------------- 175 (691)
T ss_pred cCCCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHH----------------
Confidence 1123456789999999999 998755 4555677779998 579999999999873211
Q ss_pred HhcCCCCCCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCcc
Q 002469 256 KKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPG 335 (918)
Q Consensus 256 kk~~iepraPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~ 335 (918)
.|+ +.++++..+ . +
T Consensus 176 ------------------------------~e~----~~~~~L~~~-------~---~---------------------- 189 (691)
T PRK05454 176 ------------------------------AEE----AAWLELRAE-------L---G---------------------- 189 (691)
T ss_pred ------------------------------HHH----HHHHHHHHh-------c---C----------------------
Confidence 111 133343321 0 0
Q ss_pred ceEEEecCCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh
Q 002469 336 MIQVFLGENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM 415 (918)
Q Consensus 336 ~iqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff 415 (918)
.-+++.|..|++ |.|+||||+|.+++.++ .+++||+++|||++ +.+++|++++..|
T Consensus 190 -----------------~~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivvLDADs~-m~~d~L~~lv~~m 245 (691)
T PRK05454 190 -----------------GEGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVVLDADSL-MSGDTLVRLVRLM 245 (691)
T ss_pred -----------------CCCcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEEEcCCCC-CCHHHHHHHHHHH
Confidence 012589988877 78899999999999765 67799999999995 6899999999987
Q ss_pred c-CCCCCceEEEEecCccccCCCcc-ccccc-hhhhhhhhhcccccCCC--CccccccCcchhhhhhcCCCCCCCCCCCC
Q 002469 416 M-DPNLGKHVCYVQFPQRFDGIDRN-DRYAN-RNTVFFDINLRGLDGIQ--GPVYVGTGCVFNRTALYGYEPPLKPKHRK 490 (918)
Q Consensus 416 ~-Dp~~g~~va~VQ~PQ~F~n~d~~-d~~~n-~~~~Ff~i~~~gldg~q--gp~y~GTg~v~RR~ALyg~~p~~~~~~~~ 490 (918)
. || ++|.||+|+.+.|.+.- .|..+ ...++.++...|++.+| ...|+|+|+++||+|+..
T Consensus 246 ~~dP----~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~----------- 310 (691)
T PRK05454 246 EANP----RAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE----------- 310 (691)
T ss_pred hhCc----CEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH-----------
Confidence 5 99 89999999999987631 22211 23456666778888776 357899999999998852
Q ss_pred CCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhH
Q 002469 491 PGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVAST 570 (918)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~ 570 (918)
T Consensus 311 -------------------------------------------------------------------------------- 310 (691)
T PRK05454 311 -------------------------------------------------------------------------------- 310 (691)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCH
Q 002469 571 LMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINL 650 (918)
Q Consensus 571 l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl 650 (918)
.||.|.- ....||..++++||++++.+|+++||+++|+++ ...+++++|+|+
T Consensus 311 ---~~glp~L------------------------~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl 362 (691)
T PRK05454 311 ---HCGLPPL------------------------PGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNL 362 (691)
T ss_pred ---hcCCccc------------------------cccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCH
Confidence 1222110 000134457999999999999999999999965 333589999999
Q ss_pred HHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHH-HHHHHHHH
Q 002469 651 SDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLM-YCTLPAVC 714 (918)
Q Consensus 651 ~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~li-y~llPil~ 714 (918)
.++++||.||++|++|++.. +. .+++++.+|++|++.++.++.+...++ +++.|++.
T Consensus 363 ~~~~~qr~RW~~G~lQ~l~~----l~---~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 363 LDELKRDRRWCQGNLQHLRL----LL---AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred HHHHHHHHHHHhchHHHHHH----HH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999852 33 578999999999988877776654433 33444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.3e-34 Score=310.06 Aligned_cols=182 Identities=20% Similarity=0.283 Sum_probs=145.6
Q ss_pred CcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhc-CCCCCceEEEEecCccc
Q 002469 355 PRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGKHVCYVQFPQRF 433 (918)
Q Consensus 355 P~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~-Dp~~g~~va~VQ~PQ~F 433 (918)
++++|++|++ ++|+||||||+++...+ +++|||+++|||+ ++.|++|++++.+|. || ++|.||+||+|
T Consensus 67 ~~v~~~~r~~----~~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~-~~~p~~l~~~v~~~~~~~----~vg~vq~~~~~ 135 (254)
T cd04191 67 GRIYYRRRRE----NTGRKAGNIADFCRRWG--SRYDYMVVLDADS-LMSGDTIVRLVRRMEANP----RAGIIQTAPKL 135 (254)
T ss_pred CcEEEEEcCC----CCCccHHHHHHHHHHhC--CCCCEEEEEeCCC-CCCHHHHHHHHHHHHhCC----CEEEEeCCcee
Confidence 4699999998 56789999999998532 6889999999999 578999999999885 99 89999999999
Q ss_pred cCCCcc-cccc-chhhhhhhhhcccccCCCC--ccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCcc
Q 002469 434 DGIDRN-DRYA-NRNTVFFDINLRGLDGIQG--PVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSS 509 (918)
Q Consensus 434 ~n~d~~-d~~~-n~~~~Ff~i~~~gldg~qg--p~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (918)
.|.+.. .+.. -++..|..+.+.|++.+++ .+|+||+.++||+||... |
T Consensus 136 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~-------------~--------------- 187 (254)
T cd04191 136 IGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH-------------C--------------- 187 (254)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh-------------c---------------
Confidence 997642 2211 1356677788888887654 689999999999998421 0
Q ss_pred ccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHH
Q 002469 510 KKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKE 589 (918)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~ 589 (918)
.+.++||+
T Consensus 188 ------------------------------------------------------------~~~~i~g~------------ 195 (254)
T cd04191 188 ------------------------------------------------------------ALPVLPGR------------ 195 (254)
T ss_pred ------------------------------------------------------------CCccccCC------------
Confidence 00123332
Q ss_pred HHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhH
Q 002469 590 AIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVE 666 (918)
Q Consensus 590 a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQ 666 (918)
.||..++++||+++|++++.+||+++|.+... +.++++|+|++++++||.||++|++|
T Consensus 196 ------------------g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~-~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 196 ------------------PPFGGHILSHDFVEAALMRRAGWEVRLAPDLE-GSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ------------------CCCCCCeecHHHHHHHHHHHcCCEEEEccCCc-ceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 14656799999999999999999999996543 24799999999999999999999997
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.98 E-value=6.3e-31 Score=296.88 Aligned_cols=233 Identities=29% Similarity=0.435 Sum_probs=172.7
Q ss_pred CcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCch
Q 002469 187 LAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPE 266 (918)
Q Consensus 187 lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe 266 (918)
+|.|||+||+|| |++.++.+|+.|++++|||. +.++|.|||+++-|++-+. +++.
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~--------------~~~~------ 107 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILE--------------ELGA------ 107 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHH--------------HHHh------
Confidence 699999999999 99999999999999999995 7899999999885444221 1110
Q ss_pred hhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCC
Q 002469 267 WYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGG 346 (918)
Q Consensus 267 ~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~ 346 (918)
+. +..++
T Consensus 108 ------------------------------~~-----------------------------------~~~~~-------- 114 (439)
T COG1215 108 ------------------------------EY-----------------------------------GPNFR-------- 114 (439)
T ss_pred ------------------------------hc-----------------------------------CcceE--------
Confidence 00 00011
Q ss_pred CCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEE
Q 002469 347 LDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCY 426 (918)
Q Consensus 347 ~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~ 426 (918)
+.|. ++ .+++|+||+|.++.. +.+|+|+++|||+ ++.|++|++++..|.|+. .+|.
T Consensus 115 ----------~~~~--~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~-~~~~d~l~~~~~~f~~~~---~~~v 170 (439)
T COG1215 115 ----------VIYP--EK----KNGGKAGALNNGLKR----AKGDVVVILDADT-VPEPDALRELVSPFEDPP---VGAV 170 (439)
T ss_pred ----------EEec--cc----cCccchHHHHHHHhh----cCCCEEEEEcCCC-CCChhHHHHHHhhhcCCC---eeEE
Confidence 1111 12 688999999999996 6799999999999 589999999999999885 3489
Q ss_pred EecCccccCCCccccccchh-----hhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCC
Q 002469 427 VQFPQRFDGIDRNDRYANRN-----TVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGS 501 (918)
Q Consensus 427 VQ~PQ~F~n~d~~d~~~n~~-----~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~ 501 (918)
+|.||.+.+.++........ ..++-....+.++-...+++|++.++||+||
T Consensus 171 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL------------------------ 226 (439)
T COG1215 171 VGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSAL------------------------ 226 (439)
T ss_pred eCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHH------------------------
Confidence 99999998875411111111 1222222222222244555666655555554
Q ss_pred cccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCc
Q 002469 502 RKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSA 581 (918)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~ 581 (918)
++.||.
T Consensus 227 ----------------------------------------------------------------------~~~g~~---- 232 (439)
T COG1215 227 ----------------------------------------------------------------------EEVGGW---- 232 (439)
T ss_pred ----------------------------------------------------------------------HHhCCC----
Confidence 566754
Q ss_pred chhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhh
Q 002469 582 THETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWA 661 (918)
Q Consensus 582 ~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa 661 (918)
...++|||.+++++++.+|||+.|++++. +++++|+|+.++++||.||+
T Consensus 233 -----------------------------~~~~i~ED~~lt~~l~~~G~~~~~~~~~~--~~~~~p~t~~~~~~Qr~RW~ 281 (439)
T COG1215 233 -----------------------------LEDTITEDADLTLRLHLRGYRVVYVPEAI--VWTEAPETLKELWRQRLRWA 281 (439)
T ss_pred -----------------------------CCCceeccHHHHHHHHHCCCeEEEeecce--EeeeCcccHHHHHHHHHHHH
Confidence 44799999999999999999999997653 59999999999999999999
Q ss_pred cchhHHHhh
Q 002469 662 LGSVEILFS 670 (918)
Q Consensus 662 ~G~lQill~ 670 (918)
+|++|++..
T Consensus 282 ~g~~~~~~~ 290 (439)
T COG1215 282 RGGLQVLLL 290 (439)
T ss_pred cccceeeeh
Confidence 999999974
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.97 E-value=8e-29 Score=284.26 Aligned_cols=232 Identities=21% Similarity=0.246 Sum_probs=168.1
Q ss_pred CCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCC
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 264 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepra 264 (918)
+..|.|+|+||+|| |+. .+.+|+.|++++||| ++.|+|.|||+++-|.+.+.|
T Consensus 72 ~~~p~vsViIP~yN---E~~-~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~--------------------- 124 (444)
T PRK14583 72 KGHPLVSILVPCFN---EGL-NARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDA--------------------- 124 (444)
T ss_pred CCCCcEEEEEEeCC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHH---------------------
Confidence 35799999999999 885 568999999999999 589999999998743332211
Q ss_pred chhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCC
Q 002469 265 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 344 (918)
Q Consensus 265 Pe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~ 344 (918)
+ +++
T Consensus 125 ---------------------------------~-------~~~------------------------------------ 128 (444)
T PRK14583 125 ---------------------------------L-------LAE------------------------------------ 128 (444)
T ss_pred ---------------------------------H-------HHh------------------------------------
Confidence 1 000
Q ss_pred CCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCce
Q 002469 345 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKH 423 (918)
Q Consensus 345 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~~g~~ 423 (918)
.|++.++.+++ .+.||+|+|++++. +++||++++|+|+ +++|++|++.+..| .|| +
T Consensus 129 ---------~~~v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~-~~~~d~L~~lv~~~~~~~----~ 185 (444)
T PRK14583 129 ---------DPRLRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDA-LLDKNAVPYLVAPLIANP----R 185 (444)
T ss_pred ---------CCCEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCC-CcCHHHHHHHHHHHHhCC----C
Confidence 12345555443 23599999999986 7899999999999 57999999999855 577 8
Q ss_pred EEEEecCccccCCCcc-ccc-cchhhhhhhhhcccccCCCCccc-cccCcchhhhhhcCCCCCCCCCCCCCCCcccccCC
Q 002469 424 VCYVQFPQRFDGIDRN-DRY-ANRNTVFFDINLRGLDGIQGPVY-VGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGG 500 (918)
Q Consensus 424 va~VQ~PQ~F~n~d~~-d~~-~n~~~~Ff~i~~~gldg~qgp~y-~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~ 500 (918)
++.||..++..|.+.. .+. ..+...++....++.+..+..++ .|+++.|||+
T Consensus 186 ~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~------------------------- 240 (444)
T PRK14583 186 TGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRR------------------------- 240 (444)
T ss_pred eEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHH-------------------------
Confidence 9999998776553211 111 11223334444444443333322 2444445554
Q ss_pred CcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCC
Q 002469 501 SRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQS 580 (918)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~ 580 (918)
+++++||+.
T Consensus 241 ---------------------------------------------------------------------al~~vGg~~-- 249 (444)
T PRK14583 241 ---------------------------------------------------------------------ALADVGYWS-- 249 (444)
T ss_pred ---------------------------------------------------------------------HHHHcCCCC--
Confidence 445677654
Q ss_pred cchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhh
Q 002469 581 ATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRW 660 (918)
Q Consensus 581 ~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RW 660 (918)
.+.++||++++++++.+||++.|+++.. +++++|+|++++++||.||
T Consensus 250 -------------------------------~~~i~ED~dl~~rl~~~G~~i~~~p~a~--~~~~~p~t~~~~~~Qr~RW 296 (444)
T PRK14583 250 -------------------------------PDMITEDIDISWKLQLKHWSVFFEPRGL--CWILMPETLRGLWKQRLRW 296 (444)
T ss_pred -------------------------------CCcccccHHHHHHHHHcCCeEEEeeccE--EeeeCCCCHHHHHHHHHHH
Confidence 4689999999999999999999996543 5999999999999999999
Q ss_pred hcchhHHHhhc
Q 002469 661 ALGSVEILFSR 671 (918)
Q Consensus 661 a~G~lQill~k 671 (918)
++|.+|+++++
T Consensus 297 ~~G~~~~~~~~ 307 (444)
T PRK14583 297 AQGGAEVFLKN 307 (444)
T ss_pred hCcHHHHHHHH
Confidence 99999999864
No 17
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.97 E-value=5.1e-28 Score=277.45 Aligned_cols=288 Identities=15% Similarity=0.206 Sum_probs=192.7
Q ss_pred CCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCC
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepr 263 (918)
++.+|.|+|+||+|| |+ ..+.+||.|+++++||.+++.|+|.|||+++-|.+.+.|+
T Consensus 45 ~~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~------------------- 101 (439)
T TIGR03111 45 IGKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRA------------------- 101 (439)
T ss_pred cCCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHH-------------------
Confidence 467899999999998 77 7899999999999999999999999999988544432221
Q ss_pred CchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecC
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~ 343 (918)
+. + |
T Consensus 102 -----------------------------------~~-------~------------------------~---------- 105 (439)
T TIGR03111 102 -----------------------------------QN-------E------------------------F---------- 105 (439)
T ss_pred -----------------------------------HH-------h------------------------C----------
Confidence 10 0 0
Q ss_pred CCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhc-CCCCCc
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGK 422 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~-Dp~~g~ 422 (918)
|++ ++.+.+ +.|.||+|+|++++. +++|||+++|+|++ ++|++|++++..|. ||
T Consensus 106 -----------~~v-~v~~~~----~~~Gka~AlN~gl~~----s~g~~v~~~DaD~~-~~~d~L~~l~~~f~~~~---- 160 (439)
T TIGR03111 106 -----------PGL-SLRYMN----SDQGKAKALNAAIYN----SIGKYIIHIDSDGK-LHKDAIKNMVTRFENNP---- 160 (439)
T ss_pred -----------CCe-EEEEeC----CCCCHHHHHHHHHHH----ccCCEEEEECCCCC-cChHHHHHHHHHHHhCC----
Confidence 111 222111 236799999999996 78999999999995 69999999999775 77
Q ss_pred eEEEEecCccccCCCccc-------cccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcc
Q 002469 423 HVCYVQFPQRFDGIDRND-------RYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLS 495 (918)
Q Consensus 423 ~va~VQ~PQ~F~n~d~~d-------~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~ 495 (918)
+++.|+..+.- +.+..+ ++..+.. +++.... ++.|-+ ++. .. +.
T Consensus 161 ~v~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~y~~~--------~l~~r~--~~s-------------~~----~~ 211 (439)
T TIGR03111 161 DIHAMTGVILT-DKELIEKTKGRFLKLIRRCE-YFEYAQA--------FLAGRN--FES-------------QV----NS 211 (439)
T ss_pred CeEEEEeEEec-CchhhhhhcchhhhHhHHhH-HHHHHHH--------HHhhhH--HHH-------------hc----CC
Confidence 56666544321 111000 0000000 1111000 000000 000 00 00
Q ss_pred cccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcC
Q 002469 496 SLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENG 575 (918)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~G 575 (918)
.|+ -.|....|+++++++.|
T Consensus 212 ~~~------------------------------------------------------------~sGa~~~~Rr~~l~~vg 231 (439)
T TIGR03111 212 LFT------------------------------------------------------------LSGAFSAFRRETILKTQ 231 (439)
T ss_pred eEE------------------------------------------------------------EccHHHhhhHHHHHHhC
Confidence 000 01445568888888999
Q ss_pred CCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHH-CCcEEEEeCCCCCcccccCCCCHHHHH
Q 002469 576 GVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHA-RGWRSIYCMPKRPAFKGSAPINLSDRL 654 (918)
Q Consensus 576 G~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~-~GwrsvY~~p~~~a~~G~aP~tl~~~l 654 (918)
|+++ ++++||++++++++. .|+++.|++++ .++.++|+|+++++
T Consensus 232 gf~~---------------------------------~~i~ED~~l~~rl~~~~g~kv~~~~~a--~~~~~~p~t~~~~~ 276 (439)
T TIGR03111 232 LYNS---------------------------------ETVGEDTDMTFQIRELLDGKVYLCENA--IFYVDPIDGLNKLY 276 (439)
T ss_pred CCCC---------------------------------CCcCccHHHHHHHHHhcCCeEEECCCC--EEEEECCcCHHHHH
Confidence 8765 589999999999975 69999999654 36899999999999
Q ss_pred HHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCccc
Q 002469 655 NQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIM 722 (918)
Q Consensus 655 ~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~Ll~Gi~ii 722 (918)
+||.||++|.+|++....++.. +.+.++.+++.+......+...++.+++.++++++.++|..+.
T Consensus 277 ~QR~RW~rG~~qv~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 277 TQRQRWQRGELEVSHMFFESAN---KSIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHhccHHHHHHHHHhhhh---hchhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999975443443 3446666666554555555667788888888888888876554
No 18
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=2.7e-27 Score=268.22 Aligned_cols=232 Identities=25% Similarity=0.291 Sum_probs=165.9
Q ss_pred CCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCC
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepr 263 (918)
....|.|.|+||+|| |+ ..+.+|+.|+++++|| +..++|.|||.++-|.+.+.
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~--------------------- 102 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILD--------------------- 102 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHH---------------------
Confidence 356899999999998 86 6789999999999999 57899999999873322111
Q ss_pred CchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecC
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~ 343 (918)
++ ++
T Consensus 103 ---------------------------------~~-------~~------------------------------------ 106 (420)
T PRK11204 103 ---------------------------------RL-------AA------------------------------------ 106 (420)
T ss_pred ---------------------------------HH-------HH------------------------------------
Confidence 11 00
Q ss_pred CCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCc
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGK 422 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~~g~ 422 (918)
+.|++.++.++++ ..||+|+|.+++. +++||++++|+|.+ +.|++|++++..| .||
T Consensus 107 ---------~~~~v~~i~~~~n-----~Gka~aln~g~~~----a~~d~i~~lDaD~~-~~~d~L~~l~~~~~~~~---- 163 (420)
T PRK11204 107 ---------QIPRLRVIHLAEN-----QGKANALNTGAAA----ARSEYLVCIDGDAL-LDPDAAAYMVEHFLHNP---- 163 (420)
T ss_pred ---------hCCcEEEEEcCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCC-CChhHHHHHHHHHHhCC----
Confidence 0134677776543 3499999999996 78999999999995 7999999999977 588
Q ss_pred eEEEEecCccccCCCccccccchhhh----hhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCccccc
Q 002469 423 HVCYVQFPQRFDGIDRNDRYANRNTV----FFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLF 498 (918)
Q Consensus 423 ~va~VQ~PQ~F~n~d~~d~~~n~~~~----Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~ 498 (918)
+++.||...+..|... ..+..+.. .+....++....+...++
T Consensus 164 ~v~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 209 (420)
T PRK11204 164 RVGAVTGNPRIRNRST--LLGRIQVGEFSSIIGLIKRAQRVYGRVFTV-------------------------------- 209 (420)
T ss_pred CeEEEECCceeccchh--HHHHHHHHHHHHhhhHHHHHHHHhCCceEe--------------------------------
Confidence 8999999877665321 11111111 111111110000000000
Q ss_pred CCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCC
Q 002469 499 GGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVP 578 (918)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~ 578 (918)
-|....|+++++++.||+.
T Consensus 210 -------------------------------------------------------------~G~~~~~rr~~l~~vgg~~ 228 (420)
T PRK11204 210 -------------------------------------------------------------SGVITAFRKSALHEVGYWS 228 (420)
T ss_pred -------------------------------------------------------------cceeeeeeHHHHHHhCCCC
Confidence 1333345666677788765
Q ss_pred CCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhh
Q 002469 579 QSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVL 658 (918)
Q Consensus 579 ~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~ 658 (918)
+ +.++||++++++++.+||++.|+++.. ++++.|+|++++++||.
T Consensus 229 ~---------------------------------~~~~ED~~l~~rl~~~G~~i~~~p~~~--~~~~~p~t~~~~~~Qr~ 273 (420)
T PRK11204 229 T---------------------------------DMITEDIDISWKLQLRGWDIRYEPRAL--CWILMPETLKGLWKQRL 273 (420)
T ss_pred C---------------------------------CcccchHHHHHHHHHcCCeEEeccccE--EEeECcccHHHHHHHHH
Confidence 4 578999999999999999999996543 59999999999999999
Q ss_pred hhhcchhHHHhhc
Q 002469 659 RWALGSVEILFSR 671 (918)
Q Consensus 659 RWa~G~lQill~k 671 (918)
||++|++|.++++
T Consensus 274 RW~~G~~~~l~~~ 286 (420)
T PRK11204 274 RWAQGGAEVLLKN 286 (420)
T ss_pred HHhcCHHHHHHHH
Confidence 9999999999754
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.95 E-value=1.5e-25 Score=260.21 Aligned_cols=265 Identities=20% Similarity=0.225 Sum_probs=179.6
Q ss_pred CCcceeEEEecCCCCCCCHHHHHHHHHHHH-cCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCC
Q 002469 186 QLAAVDIFVSTVDPLKEPPLVTANTVLSIL-AVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 264 (918)
Q Consensus 186 ~lp~VDvfV~t~dp~kEp~~v~~nTvls~l-a~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepra 264 (918)
..|+|+|+||++| |. .++.+||-|++ ++||| ++.|+|.||++++-|.+.+.|.
T Consensus 64 ~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l-------------------- 117 (504)
T PRK14716 64 PEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRL-------------------- 117 (504)
T ss_pred CCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHH--------------------
Confidence 4899999999999 86 78999999965 78997 7899999999987554433221
Q ss_pred chhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCC
Q 002469 265 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 344 (918)
Q Consensus 265 Pe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~ 344 (918)
+ +.||+
T Consensus 118 -----------------------------------------~------------------------~~~p~--------- 123 (504)
T PRK14716 118 -----------------------------------------A------------------------ARYPR--------- 123 (504)
T ss_pred -----------------------------------------H------------------------HHCCC---------
Confidence 0 01233
Q ss_pred CCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhc--ccCCC---CEEEEecCCCCCCchHHHHHHHHhhcCCC
Q 002469 345 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSA--VLTNG---PFLLNLDCDHYINNSKALREAMCFMMDPN 419 (918)
Q Consensus 345 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~--v~tn~---p~il~lD~D~~v~~~~~Lr~am~ff~Dp~ 419 (918)
+..+. .+++| .+.||+|||.+++... -...| ++|+++|||.+ ++|++|+....++.|
T Consensus 124 ------------v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~-v~Pd~Lr~~~~~~~~-- 185 (504)
T PRK14716 124 ------------VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDV-IHPLELRLYNYLLPR-- 185 (504)
T ss_pred ------------eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCC-cCccHHHHHHhhcCC--
Confidence 22111 12222 3589999999987531 01234 99999999995 799999986555544
Q ss_pred CCceEEEEecCccccCCCcccc----ccchhhhhhhhhcccccCCCCcc-ccccCcchhhhhhcCCCCCCCCCCCCCCCc
Q 002469 420 LGKHVCYVQFPQRFDGIDRNDR----YANRNTVFFDINLRGLDGIQGPV-YVGTGCVFNRTALYGYEPPLKPKHRKPGLL 494 (918)
Q Consensus 420 ~g~~va~VQ~PQ~F~n~d~~d~----~~n~~~~Ff~i~~~gldg~qgp~-y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~ 494 (918)
.++||.|+...+.+.+.. |..+....+...++.++.+++++ ++|+|++|||++|-.+
T Consensus 186 ----~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l-------------- 247 (504)
T PRK14716 186 ----HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERL-------------- 247 (504)
T ss_pred ----CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHH--------------
Confidence 358999987665443322 22222222333456667777664 6789999998887210
Q ss_pred ccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhc
Q 002469 495 SSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMEN 574 (918)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~ 574 (918)
..+.
T Consensus 248 ----------------------------------------------------------------------------~~~~ 251 (504)
T PRK14716 248 ----------------------------------------------------------------------------AAER 251 (504)
T ss_pred ----------------------------------------------------------------------------Hhhc
Confidence 0122
Q ss_pred CCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCC-------------Cc
Q 002469 575 GGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKR-------------PA 641 (918)
Q Consensus 575 GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~-------------~a 641 (918)
||. +|..+++|||+++|++++.+|||++|++.+. .+
T Consensus 252 GG~-------------------------------~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~ 300 (504)
T PRK14716 252 GGQ-------------------------------PFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIA 300 (504)
T ss_pred CCC-------------------------------CCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccccccccccc
Confidence 331 2566899999999999999999999996542 12
Q ss_pred ccccCCCCHHHHHHHhhhhhcch-hHHHhhcc--cccccccCCCCCcccchhhhhhhh
Q 002469 642 FKGSAPINLSDRLNQVLRWALGS-VEILFSRH--CPIWYGYGGRLKFLERFAYVNTTI 696 (918)
Q Consensus 642 ~~G~aP~tl~~~l~QR~RWa~G~-lQill~k~--~PL~~g~~~~L~~~QRL~Yl~~~l 696 (918)
+.+++|+|++++++||.||++|. +|...+.- .++. .+.+.|++|...+...+
T Consensus 301 t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~---~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 301 TREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA---TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh---hhhhHHHHHHHHHHHHH
Confidence 35889999999999999999995 78875321 1121 23366777777665544
No 20
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.93 E-value=2.5e-25 Score=228.91 Aligned_cols=229 Identities=38% Similarity=0.597 Sum_probs=177.4
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchh
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~ 267 (918)
|.|.|+||+|| |++..+..++.|+++.+||.+++.++|+|||.++-|.+-+.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~------------------------- 52 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAA------------------------- 52 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHH-------------------------
Confidence 67999999999 88889999999999999999889999999998763222110
Q ss_pred hhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCC
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~ 347 (918)
+ +..+ +
T Consensus 53 -----------------------------~-------~~~~-----------------------~--------------- 58 (234)
T cd06421 53 -----------------------------E-------LGVE-----------------------Y--------------- 58 (234)
T ss_pred -----------------------------H-------hhcc-----------------------c---------------
Confidence 0 1000 0
Q ss_pred CCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcC-CCCCceEEE
Q 002469 348 DAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMD-PNLGKHVCY 426 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~D-p~~g~~va~ 426 (918)
++.|+.+++ +...|+||+|++++. .+++||+.+|+|.+ .+|++|.+.+..|.+ | +++.
T Consensus 59 --------~~~~~~~~~----~~~~~~~~~n~~~~~----a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~----~~~~ 117 (234)
T cd06421 59 --------GYRYLTRPD----NRHAKAGNLNNALAH----TTGDFVAILDADHV-PTPDFLRRTLGYFLDDP----KVAL 117 (234)
T ss_pred --------CceEEEeCC----CCCCcHHHHHHHHHh----CCCCEEEEEccccC-cCccHHHHHHHHHhcCC----CeEE
Confidence 245666655 456799999999995 68999999999996 589999999998876 7 8999
Q ss_pred EecCccccCCCccc----cccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCc
Q 002469 427 VQFPQRFDGIDRND----RYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSR 502 (918)
Q Consensus 427 VQ~PQ~F~n~d~~d----~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~ 502 (918)
||+++.+.+.+..+ .+......|+.....+........+.|++.++||+++
T Consensus 118 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~------------------------- 172 (234)
T cd06421 118 VQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREAL------------------------- 172 (234)
T ss_pred EecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHH-------------------------
Confidence 99999998776542 2333445555555555554555666677766666554
Q ss_pred ccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcc
Q 002469 503 KKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAT 582 (918)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~ 582 (918)
+++||++.
T Consensus 173 ---------------------------------------------------------------------~~ig~~~~--- 180 (234)
T cd06421 173 ---------------------------------------------------------------------DEIGGFPT--- 180 (234)
T ss_pred ---------------------------------------------------------------------HHhCCCCc---
Confidence 45677654
Q ss_pred hhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhc
Q 002469 583 HETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 662 (918)
Q Consensus 583 ~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~ 662 (918)
..+.||++++++++++||+++|++... +++..|.++.++++||.||.+
T Consensus 181 ------------------------------~~~~eD~~l~~r~~~~g~~i~~~~~~~--~~~~~~~~~~~~~~q~~rw~~ 228 (234)
T cd06421 181 ------------------------------DSVTEDLATSLRLHAKGWRSVYVPEPL--AAGLAPETLAAYIKQRLRWAR 228 (234)
T ss_pred ------------------------------cceeccHHHHHHHHHcCceEEEecCcc--ccccCCccHHHHHHHHHHHhc
Confidence 366899999999999999999997654 589999999999999999999
Q ss_pred chhHHH
Q 002469 663 GSVEIL 668 (918)
Q Consensus 663 G~lQil 668 (918)
|++|++
T Consensus 229 ~~~~~~ 234 (234)
T cd06421 229 GMLQIL 234 (234)
T ss_pred CCeeeC
Confidence 999864
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=2.5e-24 Score=259.09 Aligned_cols=242 Identities=21% Similarity=0.314 Sum_probs=168.7
Q ss_pred CCCcceeEEEecCCCCCCCHHHHHHHHHHHH-cCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCC
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSIL-AVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~l-a~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepr 263 (918)
+..|+|.|+||++| |. .++.+|+-+++ ++|||. +.|+|.||+.++-|.+.+.+
T Consensus 60 ~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~-------------------- 113 (727)
T PRK11234 60 PDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDA-------------------- 113 (727)
T ss_pred CCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHH--------------------
Confidence 45699999999999 97 79999999987 799995 89999977665533332211
Q ss_pred CchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecC
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~ 343 (918)
+++ .||++
T Consensus 114 -----------------------------------------l~~------------------------~~p~~------- 121 (727)
T PRK11234 114 -----------------------------------------VCA------------------------RFPNV------- 121 (727)
T ss_pred -----------------------------------------HHH------------------------HCCCc-------
Confidence 110 11211
Q ss_pred CCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhccc---CCC--CEEEEecCCCCCCchHHHHHHHHhhcCC
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVL---TNG--PFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~---tn~--p~il~lD~D~~v~~~~~Lr~am~ff~Dp 418 (918)
+++.+.| || .+.||+|||.++....-. +.+ +.++++|||. +++|++|+ .+.++.++
T Consensus 122 ------------~~v~~~~---~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~-~v~pd~L~-~~~~l~~~ 182 (727)
T PRK11234 122 ------------HKVVCAR---PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAED-VISPMELR-LFNYLVER 182 (727)
T ss_pred ------------EEEEeCC---CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCC-CCChhHHH-HHHhhcCC
Confidence 1233333 33 347999999999863111 133 5688899999 47999998 67888887
Q ss_pred CCCceEEEEecCccccCCCcccc----ccchhhhhhhhhcccccCCCCc-cccccCcchhhhhhcCCCCCCCCCCCCCCC
Q 002469 419 NLGKHVCYVQFPQRFDGIDRNDR----YANRNTVFFDINLRGLDGIQGP-VYVGTGCVFNRTALYGYEPPLKPKHRKPGL 493 (918)
Q Consensus 419 ~~g~~va~VQ~PQ~F~n~d~~d~----~~n~~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~ 493 (918)
+ ++||.|..-.+...+.. |..+....++..+++++.++|+ .+.|+|++|+|+++
T Consensus 183 ----~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l---------------- 241 (727)
T PRK11234 183 ----K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAV---------------- 241 (727)
T ss_pred ----C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccH----------------
Confidence 4 89999966333222221 2234444455667888888665 56688888844433
Q ss_pred cccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhh
Q 002469 494 LSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLME 573 (918)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e 573 (918)
+++.+
T Consensus 242 ---------------------------------------------------------------------------~al~~ 246 (727)
T PRK11234 242 ---------------------------------------------------------------------------TALLE 246 (727)
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 12344
Q ss_pred cC-CCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCC-------------
Q 002469 574 NG-GVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKR------------- 639 (918)
Q Consensus 574 ~G-G~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~------------- 639 (918)
.| |+ ||..+++|||+++|++|+.+||+++|++...
T Consensus 247 ~ggg~-------------------------------~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~ 295 (727)
T PRK11234 247 DGDGI-------------------------------AFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFL 295 (727)
T ss_pred hcCCC-------------------------------CcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccc
Confidence 55 42 4778999999999999999999999996211
Q ss_pred --------CcccccCCCCHHHHHHHhhhhhcc-hhHHHhh
Q 002469 640 --------PAFKGSAPINLSDRLNQVLRWALG-SVEILFS 670 (918)
Q Consensus 640 --------~a~~G~aP~tl~~~l~QR~RWa~G-~lQill~ 670 (918)
.++++..|+|+++.++||.||.+| .+|.+..
T Consensus 296 ~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~ 335 (727)
T PRK11234 296 QHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKT 335 (727)
T ss_pred cccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHH
Confidence 336788899999999999999999 5888753
No 22
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.93 E-value=9.4e-25 Score=226.89 Aligned_cols=228 Identities=22% Similarity=0.337 Sum_probs=162.2
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchh
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~ 267 (918)
|.|.|+||+|| |. ..+..++.|+++++||.+++.|+|.|| +++-|.+.+.+.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~----------------------- 52 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREI----------------------- 52 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHH-----------------------
Confidence 57999999998 86 678999999999999999899999998 665454433221
Q ss_pred hhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCC
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~ 347 (918)
..++..
T Consensus 53 ---------------------------~~~~~~----------------------------------------------- 58 (232)
T cd06437 53 ---------------------------VEEYAA----------------------------------------------- 58 (232)
T ss_pred ---------------------------HHHHhh-----------------------------------------------
Confidence 001100
Q ss_pred CCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEE
Q 002469 348 DAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYV 427 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~V 427 (918)
.-+++.++.+.+++| .|++|+|++++. .+++||+++|+|.+ ++|++|+++..++.|| +++.|
T Consensus 59 -----~~~~i~~~~~~~~~G----~k~~a~n~g~~~----a~~~~i~~~DaD~~-~~~~~l~~~~~~~~~~----~v~~v 120 (232)
T cd06437 59 -----QGVNIKHVRRADRTG----YKAGALAEGMKV----AKGEYVAIFDADFV-PPPDFLQKTPPYFADP----KLGFV 120 (232)
T ss_pred -----cCCceEEEECCCCCC----CchHHHHHHHHh----CCCCEEEEEcCCCC-CChHHHHHhhhhhcCC----CeEEE
Confidence 012477888777655 499999999995 68999999999996 6899999977788888 79999
Q ss_pred ecCccccCCCccc--ccc-chhhhhhhhhcccccCCCCc-cccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcc
Q 002469 428 QFPQRFDGIDRND--RYA-NRNTVFFDINLRGLDGIQGP-VYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRK 503 (918)
Q Consensus 428 Q~PQ~F~n~d~~d--~~~-n~~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~ 503 (918)
|....+.|.+.+- ++. -....++...+.+....... ..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 163 (232)
T cd06437 121 QTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFN------------------------------------- 163 (232)
T ss_pred ecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEec-------------------------------------
Confidence 9987665543221 110 00111222222221111111 012
Q ss_pred cCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcch
Q 002469 504 KNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATH 583 (918)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~ 583 (918)
|+...|+++++++.||+++
T Consensus 164 ---------------------------------------------------------g~~~~~rr~~~~~vgg~~~---- 182 (232)
T cd06437 164 ---------------------------------------------------------GTAGVWRKECIEDAGGWNH---- 182 (232)
T ss_pred ---------------------------------------------------------cchhhhhHHHHHHhCCCCC----
Confidence 3333566667778898765
Q ss_pred hhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcc
Q 002469 584 ETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALG 663 (918)
Q Consensus 584 ~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G 663 (918)
.++.||++++++++.+||+++|++.. . ++...|+|+.++++||+||++|
T Consensus 183 -----------------------------~~~~ED~~l~~rl~~~G~~~~~~~~~-~-v~~~~~~~~~~~~~q~~rW~~g 231 (232)
T cd06437 183 -----------------------------DTLTEDLDLSYRAQLKGWKFVYLDDV-V-VPAELPASMSAYRSQQHRWSKG 231 (232)
T ss_pred -----------------------------CcchhhHHHHHHHHHCCCeEEEeccc-e-eeeeCCcCHHHHHHHHHHhccC
Confidence 36789999999999999999999543 3 5999999999999999999998
Q ss_pred h
Q 002469 664 S 664 (918)
Q Consensus 664 ~ 664 (918)
.
T Consensus 232 ~ 232 (232)
T cd06437 232 P 232 (232)
T ss_pred C
Confidence 4
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.91 E-value=2.1e-23 Score=218.95 Aligned_cols=231 Identities=24% Similarity=0.329 Sum_probs=164.8
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchh
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~ 267 (918)
|.|.|+||+|| |+ ..+..|+.|+++++||.+++.+.|.|||.++-|.+.+.+
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~------------------------ 52 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA------------------------ 52 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH------------------------
Confidence 67999999999 86 778999999999999988899999999987744332111
Q ss_pred hhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCC
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~ 347 (918)
++ .+.
T Consensus 53 ------------------------------~~------------~~~--------------------------------- 57 (241)
T cd06427 53 ------------------------------LR------------LPS--------------------------------- 57 (241)
T ss_pred ------------------------------hc------------cCC---------------------------------
Confidence 00 000
Q ss_pred CCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhc--CCCCCceEE
Q 002469 348 DAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM--DPNLGKHVC 425 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~--Dp~~g~~va 425 (918)
-.+++++.+.+ ...|++|+|++++. ++|+||+.+|+|.. ..|++|.+++.+|. ++ +++
T Consensus 58 ------~~~i~~~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~-~~~~~l~~~~~~~~~~~~----~v~ 117 (241)
T cd06427 58 ------IFRVVVVPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDA-PDPDQLKKAVAAFARLDD----KLA 117 (241)
T ss_pred ------CeeEEEecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCC-CChHHHHHHHHHHHhcCC----CEE
Confidence 01244443322 23699999999995 78999999999996 68999999999886 24 899
Q ss_pred EEecCccccCCCccc--c-ccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCc
Q 002469 426 YVQFPQRFDGIDRND--R-YANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSR 502 (918)
Q Consensus 426 ~VQ~PQ~F~n~d~~d--~-~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~ 502 (918)
+||.+..+++...+- + +..+...+|+..+++....+.+..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 161 (241)
T cd06427 118 CVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPL------------------------------------ 161 (241)
T ss_pred EEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeec------------------------------------
Confidence 999998877643220 0 1111112233333333322222111
Q ss_pred ccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcc
Q 002469 503 KKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAT 582 (918)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~ 582 (918)
.|+...|+++++++.||+.+
T Consensus 162 ---------------------------------------------------------~g~~~~~rr~~~~~vgg~~~--- 181 (241)
T cd06427 162 ---------------------------------------------------------GGTSNHFRTDVLRELGGWDP--- 181 (241)
T ss_pred ---------------------------------------------------------CCchHHhhHHHHHHcCCCCc---
Confidence 13334566667778888654
Q ss_pred hhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhc
Q 002469 583 HETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 662 (918)
Q Consensus 583 ~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~ 662 (918)
...+||++++++++.+||+++|++. . ++...|+|++++++||.||+.
T Consensus 182 ------------------------------~~~~eD~~l~~rl~~~G~r~~~~~~-~--~~~~~~~~~~~~~~q~~Rw~~ 228 (241)
T cd06427 182 ------------------------------FNVTEDADLGLRLARAGYRTGVLNS-T--TLEEANNALGNWIRQRSRWIK 228 (241)
T ss_pred ------------------------------ccchhhHHHHHHHHHCCceEEEecc-c--ccccCcHhHHHHHHHHHHHhc
Confidence 3678999999999999999999943 3 478999999999999999999
Q ss_pred chhHHHhh
Q 002469 663 GSVEILFS 670 (918)
Q Consensus 663 G~lQill~ 670 (918)
|.+|++..
T Consensus 229 g~~~~~~~ 236 (241)
T cd06427 229 GYMQTWLV 236 (241)
T ss_pred cHHHHHHH
Confidence 99999974
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.91 E-value=4.2e-23 Score=214.11 Aligned_cols=173 Identities=28% Similarity=0.432 Sum_probs=121.1
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGI 436 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~ 436 (918)
+.++..++.+| .|+||+|.+++.+. .+++||+.+|+|.. ..|++|.+.+.+|.+| +++.||+++.+.+.
T Consensus 58 i~~i~~~~~~G----~~~~a~n~g~~~a~--~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~ 126 (236)
T cd06435 58 FRFFHVEPLPG----AKAGALNYALERTA--PDAEIIAVIDADYQ-VEPDWLKRLVPIFDDP----RVGFVQAPQDYRDG 126 (236)
T ss_pred EEEEEcCCCCC----CchHHHHHHHHhcC--CCCCEEEEEcCCCC-cCHHHHHHHHHHhcCC----CeeEEecCccccCC
Confidence 55666655334 59999999999742 45899999999984 6899999999998887 79999998765432
Q ss_pred Cccccccc----hhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCccccC
Q 002469 437 DRNDRYAN----RNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSSKKG 512 (918)
Q Consensus 437 d~~d~~~n----~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (918)
.. ..+.- ....+|...+......+..+..|++++
T Consensus 127 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------------------------------------- 164 (236)
T cd06435 127 EE-SLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCL----------------------------------------- 164 (236)
T ss_pred Cc-cHHHHHHhHHHHHHHHHHhccccccCceEEecceEE-----------------------------------------
Confidence 11 11110 001111111112222222223333333
Q ss_pred CCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHH
Q 002469 513 SDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIH 592 (918)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~ 592 (918)
+++++++++||+++
T Consensus 165 -----------------------------------------------------~rr~~~~~iGgf~~------------- 178 (236)
T cd06435 165 -----------------------------------------------------IRRSALDDVGGWDE------------- 178 (236)
T ss_pred -----------------------------------------------------EEHHHHHHhCCCCC-------------
Confidence 44555667888764
Q ss_pred hhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 002469 593 VISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFS 670 (918)
Q Consensus 593 v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill~ 670 (918)
....||++++++++.+||++.|++... .+...|.|+.++++||.||++|++|++.+
T Consensus 179 --------------------~~~~eD~dl~~r~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 179 --------------------WCITEDSELGLRMHEAGYIGVYVAQSY--GHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred --------------------ccccchHHHHHHHHHCCcEEEEcchhh--ccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 356899999999999999999996543 48999999999999999999999999974
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.88 E-value=2.2e-23 Score=214.83 Aligned_cols=224 Identities=30% Similarity=0.442 Sum_probs=134.6
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchh
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~ 267 (918)
|+|.|+||++| |+. .+..|+.|+++++|| ++.++|+||+.++-|.+.+.
T Consensus 1 P~v~Vvip~~~---~~~-~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~------------------------- 49 (228)
T PF13641_consen 1 PRVSVVIPAYN---EDD-VLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILR------------------------- 49 (228)
T ss_dssp --EEEE--BSS----HH-HHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHH-------------------------
T ss_pred CEEEEEEEecC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHH-------------------------
Confidence 78999999998 764 899999999999995 59999999998762221110
Q ss_pred hhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCC
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~ 347 (918)
+ ++++ .|.
T Consensus 50 -----------------------------~-------~~~~---~~~--------------------------------- 57 (228)
T PF13641_consen 50 -----------------------------A-------LAAR---YPR--------------------------------- 57 (228)
T ss_dssp -----------------------------H-------HHHT---TGG---------------------------------
T ss_pred -----------------------------H-------HHHH---cCC---------------------------------
Confidence 1 1110 000
Q ss_pred CCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEE
Q 002469 348 DAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYV 427 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~V 427 (918)
-++.++.+.+.+| ...|++|+|.+++. ..+++|+++|+|.+ ++|++|++++.+|.+| +++.|
T Consensus 58 -------~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~-~~p~~l~~~~~~~~~~----~~~~v 119 (228)
T PF13641_consen 58 -------VRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTV-LDPDWLERLLAAFADP----GVGAV 119 (228)
T ss_dssp --------GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEE-E-CHHHHHHHHHHHBS----S--EE
T ss_pred -------CceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcE-ECHHHHHHHHHHHHhC----CCCeE
Confidence 0256777654221 23699999999996 56999999999996 5999999999988888 89999
Q ss_pred ecCccccCCCccccccchhhhhhhh----hcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcc
Q 002469 428 QFPQRFDGIDRNDRYANRNTVFFDI----NLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRK 503 (918)
Q Consensus 428 Q~PQ~F~n~d~~d~~~n~~~~Ff~i----~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~ 503 (918)
|++..+++ +.+ .+..-...++.. ...+....+...++|++++|||+++
T Consensus 120 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~-------------------------- 171 (228)
T PF13641_consen 120 GGPVFPDN-DRN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSAL-------------------------- 171 (228)
T ss_dssp EEEEEETT-CCC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHH--------------------------
T ss_pred eeeEeecC-CCC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHH--------------------------
Confidence 98886665 322 111111122111 1223333444555666666666554
Q ss_pred cCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcch
Q 002469 504 KNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATH 583 (918)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~ 583 (918)
+++||+.+
T Consensus 172 --------------------------------------------------------------------~~~g~fd~---- 179 (228)
T PF13641_consen 172 --------------------------------------------------------------------EEVGGFDP---- 179 (228)
T ss_dssp --------------------------------------------------------------------HHH-S--S----
T ss_pred --------------------------------------------------------------------HHhCCCCC----
Confidence 46676653
Q ss_pred hhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcc
Q 002469 584 ETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALG 663 (918)
Q Consensus 584 ~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G 663 (918)
....||.++++++.++||+++|++... ++...|.|++++++||.||++|
T Consensus 180 -----------------------------~~~~eD~~l~~r~~~~G~~~~~~~~~~--v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 180 -----------------------------FILGEDFDLCLRLRAAGWRIVYAPDAL--VYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -----------------------------SSSSHHHHHHHHHHHTT--EEEEEEEE--EEE--SSSTHHHHHHHHHHH--
T ss_pred -----------------------------CCcccHHHHHHHHHHCCCcEEEECCcE--EEEeCCCCHHHHHHHHhccCcC
Confidence 467799999999999999999996433 5899999999999999999987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.85 E-value=4.4e-20 Score=207.66 Aligned_cols=236 Identities=18% Similarity=0.227 Sum_probs=156.3
Q ss_pred CCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCC
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 264 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepra 264 (918)
...|+|.|+||++| |++ .+.+++.|++++|||. +.|+|.||++++-|.+.+.
T Consensus 38 ~~~p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~---------------------- 89 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVR---------------------- 89 (373)
T ss_pred CCCCCeEEEEECCC---CCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHH----------------------
Confidence 34899999999999 875 5679999999999995 7899999988763332211
Q ss_pred chhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCC
Q 002469 265 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 344 (918)
Q Consensus 265 Pe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~ 344 (918)
+++ + +||.
T Consensus 90 --------------------------------~~~-------~------------------------~~p~--------- 97 (373)
T TIGR03472 90 --------------------------------RLR-------A------------------------DFPD--------- 97 (373)
T ss_pred --------------------------------HHH-------H------------------------hCCC---------
Confidence 111 0 0111
Q ss_pred CCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceE
Q 002469 345 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHV 424 (918)
Q Consensus 345 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~v 424 (918)
.++.++.+.++.| .+.|++|+|++++. +.+|+|+.+|+|.. +.|++|++.+..|.|| ++
T Consensus 98 ----------~~i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~-~~p~~L~~lv~~~~~~----~v 156 (373)
T TIGR03472 98 ----------ADIDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDIS-VGPDYLRQVVAPLADP----DV 156 (373)
T ss_pred ----------CceEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCC-cChhHHHHHHHHhcCC----Cc
Confidence 1255564433333 45799999998875 78999999999995 6899999999999998 78
Q ss_pred EEEecCccccCCCccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCccc
Q 002469 425 CYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKK 504 (918)
Q Consensus 425 a~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~ 504 (918)
+.|+.+.+..+ ... +.++.... ..+.. ++-+. ...+ ..|-
T Consensus 157 ~~V~~~~~~~~--~~~-~~~~l~~~------~~~~~---~~~~~--~~~~--~~~~------------------------ 196 (373)
T TIGR03472 157 GLVTCLYRGRP--VPG-FWSRLGAM------GINHN---FLPSV--MVAR--ALGR------------------------ 196 (373)
T ss_pred ceEeccccCCC--CCC-HHHHHHHH------Hhhhh---hhHHH--HHHH--hccC------------------------
Confidence 89998644221 111 11111000 00000 00000 0000 0000
Q ss_pred CCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchh
Q 002469 505 NSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHE 584 (918)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~ 584 (918)
.....|++..|++++++++||++..
T Consensus 197 ---------------------------------------------------~~~~~G~~~a~RR~~l~~iGGf~~~---- 221 (373)
T TIGR03472 197 ---------------------------------------------------ARFCFGATMALRRATLEAIGGLAAL---- 221 (373)
T ss_pred ---------------------------------------------------CccccChhhheeHHHHHHcCChHHh----
Confidence 0001366667788888899998641
Q ss_pred hHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcch
Q 002469 585 TLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 664 (918)
Q Consensus 585 ~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~ 664 (918)
..+++||++++.+++++||++.|.+.. ......|+|++++++||.||++..
T Consensus 222 ---------------------------~~~~~ED~~l~~~i~~~G~~v~~~~~~--v~~~~~~~s~~~~~~q~~RW~r~~ 272 (373)
T TIGR03472 222 ---------------------------AHHLADDYWLGELVRALGLRVVLAPVV--VDTDVHETSFATLLAHELRWSRTI 272 (373)
T ss_pred ---------------------------cccchHHHHHHHHHHHcCCeEEecchh--hhcCCCccCHHHHHHHHHHHHhhh
Confidence 146789999999999999999998543 247788899999999999997443
Q ss_pred h
Q 002469 665 V 665 (918)
Q Consensus 665 l 665 (918)
.
T Consensus 273 ~ 273 (373)
T TIGR03472 273 R 273 (373)
T ss_pred h
Confidence 3
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.85 E-value=1.9e-21 Score=205.76 Aligned_cols=52 Identities=17% Similarity=0.194 Sum_probs=46.8
Q ss_pred ccccchHHHHHHHHHCCcEEEE--eCCCCCcccccCCCCHHHHHHHhhhhhcchhH
Q 002469 613 GSVTEDILTGFKMHARGWRSIY--CMPKRPAFKGSAPINLSDRLNQVLRWALGSVE 666 (918)
Q Consensus 613 ~sITED~~tg~rL~~~GwrsvY--~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQ 666 (918)
.+++||.+++++|..+||++.| ++... ++.++|+|++++++||+||++|++.
T Consensus 190 ~~~~ED~~l~~~l~~~G~~~~~~~~~~a~--~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 190 LDLGEDRILCTLLLKAGPKRKYLYVPGAV--AETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HhHhcccceeHHHhccCCccEEEEecccE--EEEECCCCHHHHHHHhHhhhccccc
Confidence 5889999999999999999999 75443 5999999999999999999999863
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.85 E-value=3.6e-19 Score=212.87 Aligned_cols=172 Identities=20% Similarity=0.279 Sum_probs=125.2
Q ss_pred cCcchhhhHHHHHhh---cccCCCCE--EEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCcc-ccCCCcc---c
Q 002469 370 HHKKAGAMNALVRVS---AVLTNGPF--LLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQR-FDGIDRN---D 440 (918)
Q Consensus 370 hh~KAGalNallrvs---~v~tn~p~--il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~-F~n~d~~---d 440 (918)
...||.|||.++... .-.+.++| |+++|||. +++|++|+. |-++.+. + -+||.|-. ..|...+ .
T Consensus 139 p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd-~~~P~~L~~-~~~~~~~----~-~~iQ~pV~~~~~~~~~~l~~ 211 (703)
T PRK15489 139 PTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSED-VLHPLELKY-FNYLLPR----K-DLVQLPVLSLERKWYEWVAG 211 (703)
T ss_pred CCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCC-CCChhHHHH-HHhhcCC----c-ceeeeeeccCCCccccHHHH
Confidence 356999999988752 11234455 99999999 589999986 4666644 1 36998832 2221111 2
Q ss_pred cccchhhhhhhhhcccccCCCCccc-cccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCccccCCCcccCC
Q 002469 441 RYANRNTVFFDINLRGLDGIQGPVY-VGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSS 519 (918)
Q Consensus 441 ~~~n~~~~Ff~i~~~gldg~qgp~y-~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (918)
-|+.+....++..++++..+.+++. .|||++|||+||-.
T Consensus 212 ~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~---------------------------------------- 251 (703)
T PRK15489 212 TYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA---------------------------------------- 251 (703)
T ss_pred HHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH----------------------------------------
Confidence 3667777888888999988888776 56899999988721
Q ss_pred CCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccc
Q 002469 520 KHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYE 599 (918)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe 599 (918)
+.+.||..
T Consensus 252 ---------------------------------------------------l~~~gg~~--------------------- 259 (703)
T PRK15489 252 ---------------------------------------------------LMKERGNQ--------------------- 259 (703)
T ss_pred ---------------------------------------------------HHHhcCCC---------------------
Confidence 11233311
Q ss_pred cccccccccCcccccccchHHHHHHHHHCCcEEEEeCC---------------------CCCcccccCCCCHHHHHHHhh
Q 002469 600 DKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMP---------------------KRPAFKGSAPINLSDRLNQVL 658 (918)
Q Consensus 600 ~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p---------------------~~~a~~G~aP~tl~~~l~QR~ 658 (918)
+|..+|+|||+++|+||+.+|||+.|+.- ...+..+..|.|+.+.++||.
T Consensus 260 ---------~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~ 330 (703)
T PRK15489 260 ---------PFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKA 330 (703)
T ss_pred ---------CCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHH
Confidence 47778999999999999999999999321 123567899999999999999
Q ss_pred hhhcchh-HHHh
Q 002469 659 RWALGSV-EILF 669 (918)
Q Consensus 659 RWa~G~l-Qill 669 (918)
||..|-. |...
T Consensus 331 RW~~Gi~~q~~~ 342 (703)
T PRK15489 331 RWVLGIAFQGWE 342 (703)
T ss_pred HHHhHHHHhhHH
Confidence 9999987 7754
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.83 E-value=1.4e-19 Score=185.00 Aligned_cols=226 Identities=17% Similarity=0.209 Sum_probs=152.3
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchhhhhc
Q 002469 192 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQ 271 (918)
Q Consensus 192 vfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~yf~~ 271 (918)
|+||||| |+ ..+.+||.|++..+||.+++.|+|.|||++.-|.+.+.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~----------------------------- 47 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE----------------------------- 47 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-----------------------------
Confidence 6899998 75 78999999999999999889999999998763322111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCCCCCC
Q 002469 272 KIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGLDAEG 351 (918)
Q Consensus 272 ~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~d~~~ 351 (918)
+.. +.
T Consensus 48 -----------------------~~~----------~~------------------------------------------ 52 (229)
T cd04192 48 -----------------------FAA----------AK------------------------------------------ 52 (229)
T ss_pred -----------------------HHH----------hC------------------------------------------
Confidence 000 00
Q ss_pred CCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCc
Q 002469 352 NELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQ 431 (918)
Q Consensus 352 ~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ 431 (918)
..+++.++.++. + ....|+.++|.++.. ++++||+++|+|.+ +.|++|++.+..|.++ ..+.|+.++
T Consensus 53 -~~~~v~~~~~~~--~-~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~-~~~~~l~~l~~~~~~~----~~~~v~~~~ 119 (229)
T cd04192 53 -PNFQLKILNNSR--V-SISGKKNALTTAIKA----AKGDWIVTTDADCV-VPSNWLLTFVAFIQKE----QIGLVAGPV 119 (229)
T ss_pred -CCcceEEeeccC--c-ccchhHHHHHHHHHH----hcCCEEEEECCCcc-cCHHHHHHHHHHhhcC----CCcEEeeee
Confidence 012355555443 1 245799999999985 68999999999995 6899999999977766 577888888
Q ss_pred cccCCCcc-ccccchhhhhhhhhcccccCCCCc-cccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCcc
Q 002469 432 RFDGIDRN-DRYANRNTVFFDINLRGLDGIQGP-VYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSS 509 (918)
Q Consensus 432 ~F~n~d~~-d~~~n~~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (918)
.+...+.. ..+..-...+......+..+.+.+ ...|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----------------------------------------- 158 (229)
T cd04192 120 IYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGA----------------------------------------- 158 (229)
T ss_pred eecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccc-----------------------------------------
Confidence 87622211 111110000111111111111111 11222
Q ss_pred ccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHH
Q 002469 510 KKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKE 589 (918)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~ 589 (918)
+..|++++++++||+++.
T Consensus 159 -----------------------------------------------------~~~~rr~~~~~~ggf~~~--------- 176 (229)
T cd04192 159 -----------------------------------------------------NMAYRKEAFFEVGGFEGN--------- 176 (229)
T ss_pred -----------------------------------------------------eEEEEHHHHHHhcCCccc---------
Confidence 234455666778888641
Q ss_pred HHHhhccccccccccccccCcccccccchHHHHHHHHHCCc-EEEEeCCCCCcccccCCCCHHHHHHHhhhhhcc
Q 002469 590 AIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGW-RSIYCMPKRPAFKGSAPINLSDRLNQVLRWALG 663 (918)
Q Consensus 590 a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~Gw-rsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G 663 (918)
....+||.++.++++.+|| ++.|+..+...++...|.+++++++||+||++|
T Consensus 177 ----------------------~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 177 ----------------------DHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred ----------------------cccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 2366899999999999999 998885443446899999999999999999987
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.80 E-value=7.1e-19 Score=179.09 Aligned_cols=123 Identities=20% Similarity=0.220 Sum_probs=100.1
Q ss_pred cchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhh
Q 002469 372 KKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFD 451 (918)
Q Consensus 372 ~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~ 451 (918)
.|++|+|++++. ++++|++++|+|.. ..|++|++.+..+.+| +++.|+..
T Consensus 73 ~~~~~~n~g~~~----a~~d~i~~~D~D~~-~~~~~l~~l~~~~~~~----~~~~v~~~--------------------- 122 (196)
T cd02520 73 PKVNNLIKGYEE----ARYDILVISDSDIS-VPPDYLRRMVAPLMDP----GVGLVTCL--------------------- 122 (196)
T ss_pred HhHHHHHHHHHh----CCCCEEEEECCCce-EChhHHHHHHHHhhCC----CCCeEEee---------------------
Confidence 589999999995 78999999999995 6899999999988888 56777764
Q ss_pred hhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccc
Q 002469 452 INLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSL 531 (918)
Q Consensus 452 i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (918)
...|+++++||+++
T Consensus 123 ------------~~~g~~~~~r~~~~------------------------------------------------------ 136 (196)
T cd02520 123 ------------CAFGKSMALRREVL------------------------------------------------------ 136 (196)
T ss_pred ------------cccCceeeeEHHHH------------------------------------------------------
Confidence 45577777777665
Q ss_pred hhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcc
Q 002469 532 EDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWI 611 (918)
Q Consensus 532 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~ 611 (918)
++.||++..
T Consensus 137 ----------------------------------------~~~ggf~~~------------------------------- 145 (196)
T cd02520 137 ----------------------------------------DAIGGFEAF------------------------------- 145 (196)
T ss_pred ----------------------------------------HhccChHHH-------------------------------
Confidence 345665320
Q ss_pred cccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcc
Q 002469 612 YGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALG 663 (918)
Q Consensus 612 ~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G 663 (918)
...+.||+++++++..+||++.|++.. .++...|.+++++++||.||++.
T Consensus 146 ~~~~~eD~~l~~rl~~~G~~i~~~~~~--~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 146 ADYLAEDYFLGKLIWRLGYRVVLSPYV--VMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred hHHHHHHHHHHHHHHHcCCeEEEcchh--eeccCCcccHHHHHHHHHHHhcc
Confidence 125689999999999999999999653 35899999999999999999863
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.78 E-value=4.1e-18 Score=176.17 Aligned_cols=59 Identities=27% Similarity=0.200 Sum_probs=51.9
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCC
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGID 437 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d 437 (918)
+..|++|+|.+++. +.++||+++|+|.. +.|++|++++..|.|| +++.|+..+.+.+.+
T Consensus 62 ~~g~~~a~n~g~~~----a~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~ 120 (235)
T cd06434 62 HPGKRRALAEGIRH----VTTDIVVLLDSDTV-WPPNALPEMLKPFEDP----KVGGVGTNQRILRPR 120 (235)
T ss_pred CCChHHHHHHHHHH----hCCCEEEEECCCce-eChhHHHHHHHhccCC----CEeEEcCceEeecCc
Confidence 34599999999986 68999999999995 6899999999988888 899999999887764
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.77 E-value=1.6e-17 Score=173.97 Aligned_cols=128 Identities=27% Similarity=0.356 Sum_probs=97.9
Q ss_pred CCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCC
Q 002469 183 EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEP 262 (918)
Q Consensus 183 ~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iep 262 (918)
+.+..|.|.|+||||| |+ ..+..++.|+++.+||.+++.++|+|||+++-|.+.+.
T Consensus 24 ~~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~-------------------- 79 (251)
T cd06439 24 DPAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAR-------------------- 79 (251)
T ss_pred CCCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHH--------------------
Confidence 3466889999999998 65 67899999999999998889999999999873322111
Q ss_pred CCchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEec
Q 002469 263 RAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLG 342 (918)
Q Consensus 263 raPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~ 342 (918)
++.+ +
T Consensus 80 -------------------------------~~~~----------~---------------------------------- 84 (251)
T cd06439 80 -------------------------------EYAD----------K---------------------------------- 84 (251)
T ss_pred -------------------------------HHhh----------C----------------------------------
Confidence 1100 0
Q ss_pred CCCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCc
Q 002469 343 ENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGK 422 (918)
Q Consensus 343 ~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~ 422 (918)
++.++..+++ ..|++|+|.+++. +++++|+.+|+|.+ +.|++|++.+..+.++
T Consensus 85 -------------~v~~i~~~~~-----~g~~~a~n~gi~~----a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~---- 137 (251)
T cd06439 85 -------------GVKLLRFPER-----RGKAAALNRALAL----ATGEIVVFTDANAL-LDPDALRLLVRHFADP---- 137 (251)
T ss_pred -------------cEEEEEcCCC-----CChHHHHHHHHHH----cCCCEEEEEccccC-cCHHHHHHHHHHhcCC----
Confidence 1344444432 3599999999996 67899999999996 5699999999998877
Q ss_pred eEEEEecCccccCC
Q 002469 423 HVCYVQFPQRFDGI 436 (918)
Q Consensus 423 ~va~VQ~PQ~F~n~ 436 (918)
++++|+......+.
T Consensus 138 ~~~~v~~~~~~~~~ 151 (251)
T cd06439 138 SVGAVSGELVIVDG 151 (251)
T ss_pred CccEEEeEEEecCC
Confidence 68888887776544
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.75 E-value=1.1e-16 Score=180.94 Aligned_cols=133 Identities=23% Similarity=0.191 Sum_probs=93.4
Q ss_pred CCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCC
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepr 263 (918)
++..|+|.|+||++| |. ..+..++-|++++|||. ++.|+|.|||+++-|.+.+.+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~-------------------- 90 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARA-------------------- 90 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHH--------------------
Confidence 467899999999999 76 67889999999999995 489999999998744332211
Q ss_pred CchhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecC
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~ 343 (918)
+. ++ .|.
T Consensus 91 ----------------------------------~~-------~~---~~~----------------------------- 97 (384)
T TIGR03469 91 ----------------------------------AA-------RA---YGR----------------------------- 97 (384)
T ss_pred ----------------------------------HH-------Hh---cCC-----------------------------
Confidence 10 00 000
Q ss_pred CCCCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccC-CCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCc
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLT-NGPFLLNLDCDHYINNSKALREAMCFMMDPNLGK 422 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~t-n~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~ 422 (918)
-+++.++..+.+|. .-..|+.|+|.+++.+.... ++|+++.+|+|.. ++|++|++++..+.++
T Consensus 98 ----------~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~-~~p~~l~~lv~~~~~~---- 161 (384)
T TIGR03469 98 ----------GDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTDADIA-HGPDNLARLVARARAE---- 161 (384)
T ss_pred ----------CCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEECCCCC-CChhHHHHHHHHHHhC----
Confidence 01244454333332 34579999999999742111 1899999999995 6899999999988876
Q ss_pred eEEEEecC
Q 002469 423 HVCYVQFP 430 (918)
Q Consensus 423 ~va~VQ~P 430 (918)
++++|..+
T Consensus 162 ~~~~vs~~ 169 (384)
T TIGR03469 162 GLDLVSLM 169 (384)
T ss_pred CCCEEEec
Confidence 34555543
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.2e-14 Score=164.20 Aligned_cols=220 Identities=20% Similarity=0.325 Sum_probs=151.6
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCceEEEEecCcccc
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKHVCYVQFPQRFD 434 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~~g~~va~VQ~PQ~F~ 434 (918)
++.|-.|.+ |-..||||+...+|..| +..+|++++|||.+ -..+.+-+.+..| .|| +.|.+||--.--
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSv-Mtgd~lvrLv~~ME~~P----~aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSV-MTGDCLVRLVRLMEANP----DAGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccc-cCchHHHHHHHHHhhCC----CCceeecchhhc
Confidence 367777766 56679999999999987 78899999999996 5788888888866 688 788999976554
Q ss_pred CCCccccccch----hhhhhhhhcccccCCCC--ccccccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCc
Q 002469 435 GIDRNDRYANR----NTVFFDINLRGLDGIQG--PVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKS 508 (918)
Q Consensus 435 n~d~~d~~~n~----~~~Ff~i~~~gldg~qg--p~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (918)
|.| ..|+-- ..++=-+.--|+..||+ .-|
T Consensus 282 gg~--TL~AR~qQFatrvYGpl~~~GLawW~~~Es~y------------------------------------------- 316 (736)
T COG2943 282 GGD--TLYARCQQFATRVYGPLFTAGLAWWQLGESHY------------------------------------------- 316 (736)
T ss_pred Ccc--hHHHHHHHHHHHHhchHHhhhhHHHhcccccc-------------------------------------------
Confidence 433 112110 12222233344444443 234
Q ss_pred cccCCCcccCCCCCCCCCccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHH
Q 002469 509 SKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLK 588 (918)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~ 588 (918)
+|++.+.|..++.|.-|.|.-.
T Consensus 317 ---------------------------------------------------WGHNAIIRt~aF~~hcgLp~Lp------- 338 (736)
T COG2943 317 ---------------------------------------------------WGHNAIIRTKAFIEHCGLPPLP------- 338 (736)
T ss_pred ---------------------------------------------------ccccceeechhhHHhcCCCCCC-------
Confidence 4444444444444444444310
Q ss_pred HHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHH
Q 002469 589 EAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIL 668 (918)
Q Consensus 589 ~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQil 668 (918)
.+-. +....++.|+..+-.|.+.||.+--. +++.-++++.|.|+.|++++-+|||+|++|-+
T Consensus 339 -----------G~~p------FgG~ilSHDfvEAALmRRaGW~v~ia-~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~ 400 (736)
T COG2943 339 -----------GRGP------FGGHILSHDFVEAALMRRAGWGVWIA-YDLDGSYEELPPNLLDELKRDRRWCHGNLQHF 400 (736)
T ss_pred -----------CCCC------CCccccchHHHHHHHHhhcCceEEEe-ccCCCchhhCCchHHHHHhhhhHhhhcchhhc
Confidence 0011 11236789999999999999965444 66777899999999999999999999999987
Q ss_pred hhcccccccccCCCCCcccchhhhhhhhhhhhHHHHHHHHHHHHHH
Q 002469 669 FSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVC 714 (918)
Q Consensus 669 l~k~~PL~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liy~llPil~ 714 (918)
. ++. .+||.|..|+.++.+++.|+++...++++++-++.
T Consensus 401 r-----l~~--~~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~g~al 439 (736)
T COG2943 401 R-----LFL--VKGLHWVSRAHFLTGVMSYLSAPLWFLFLLLGTAL 439 (736)
T ss_pred e-----eec--cCCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4 331 68999999999999999888775555544444433
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.69 E-value=1.4e-15 Score=157.52 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=48.1
Q ss_pred ccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHHhh
Q 002469 615 VTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFS 670 (918)
Q Consensus 615 ITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill~ 670 (918)
..||.+++++++++|+++.|++... .....+.+++.+++|+.||+.|..|.+..
T Consensus 180 ~~eD~~l~~r~~~~G~~~~~~~~~~--~~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 180 RNEDAELNYRLRKAGYKIWLSPDIR--VYYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred ccchhHHHHHHHHcCcEEEEcCCeE--EEEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 4699999999999999999996543 47788999999999999999999999974
No 36
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.63 E-value=8.1e-16 Score=155.62 Aligned_cols=138 Identities=27% Similarity=0.382 Sum_probs=101.7
Q ss_pred EEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCCccccccchhhhhhhhhc----ccccCCC-Ccccc
Q 002469 392 FLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINL----RGLDGIQ-GPVYV 466 (918)
Q Consensus 392 ~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~----~gldg~q-gp~y~ 466 (918)
||+++|+|.. +.+++|++++.+|.|| +++.||+|+.++| .++...+-+..+|+... ...+..+ .....
T Consensus 1 ~v~~~DaDt~-~~~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTR-LPPDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCC-CChHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 5899999995 6799999999998888 8999999999863 23444444555443211 1111111 12344
Q ss_pred ccCcchhhhhhcCCCCCCCCCCCCCCCcccccCCCcccCCCccccCCCcccCCCCCCCCCccccchhhhhcccCCCCchh
Q 002469 467 GTGCVFNRTALYGYEPPLKPKHRKPGLLSSLFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDE 546 (918)
Q Consensus 467 GTg~v~RR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 546 (918)
|+|.++||+
T Consensus 74 G~~~~~r~~----------------------------------------------------------------------- 82 (193)
T PF13632_consen 74 GSGMLFRRE----------------------------------------------------------------------- 82 (193)
T ss_pred CcceeeeHH-----------------------------------------------------------------------
Confidence 555555554
Q ss_pred hHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHH
Q 002469 547 KSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMH 626 (918)
Q Consensus 547 ~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~ 626 (918)
+++++||++. ..+++||+++++++.
T Consensus 83 -----------------------~l~~vg~~~~--------------------------------~~~~~ED~~l~~~l~ 107 (193)
T PF13632_consen 83 -----------------------ALREVGGFDD--------------------------------PFSIGEDMDLGFRLR 107 (193)
T ss_pred -----------------------HHHHhCcccc--------------------------------cccccchHHHHHHHH
Confidence 4456776541 368999999999999
Q ss_pred HCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcch
Q 002469 627 ARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 664 (918)
Q Consensus 627 ~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~ 664 (918)
++||++.|+++.. ++.++|.|+.++++||+||..|.
T Consensus 108 ~~G~~~~~~~~~~--~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 108 RAGYRIVYVPDAI--VYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred HCCCEEEEecccc--eeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999996543 58999999999999999999998
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.57 E-value=2.5e-14 Score=145.76 Aligned_cols=115 Identities=17% Similarity=0.097 Sum_probs=81.7
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhc-------ccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEe
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSA-------VLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQ 428 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~-------v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ 428 (918)
++.++.++.. + .+..|++|+|++++.+. .-..+++|+++|+|.. ..|++|+++..+|.|| +++.||
T Consensus 51 ~v~~i~~~~~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~-~~~~~l~~~~~~~~~~----~v~~v~ 123 (191)
T cd06436 51 RVHLLRRHLP-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGR-LDPNALEAVAPYFSDP----RVAGTQ 123 (191)
T ss_pred cEEEEeccCC-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCC-cCHhHHHHHHHhhcCC----ceEEEe
Confidence 3666665421 1 23469999999998641 0113589999999995 7899999988899998 799999
Q ss_pred cCccccCCCccc--cc-cchhhhhhhhhcccccCCCCccccccCcchhhhhh
Q 002469 429 FPQRFDGIDRND--RY-ANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTAL 477 (918)
Q Consensus 429 ~PQ~F~n~d~~d--~~-~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~AL 477 (918)
.+.++.|.+.+- ++ ..+...++.+++.++.......+.|+|++|||++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 124 SRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred eeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 999998865431 21 12333344566777666665567899999999877
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.46 E-value=3.9e-13 Score=135.41 Aligned_cols=102 Identities=21% Similarity=0.121 Sum_probs=63.6
Q ss_pred cCcchhhhHHHHHhhc-ccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCCcccc---ccch
Q 002469 370 HHKKAGAMNALVRVSA-VLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDR---YANR 445 (918)
Q Consensus 370 hh~KAGalNallrvs~-v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~---~~n~ 445 (918)
+..|++|+|++++... .-.++++++++|+|.. +.|++|++++..|.+. ...||......+.+.+-. +.-.
T Consensus 61 ~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~-~~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~~~~~~~~~~ 134 (183)
T cd06438 61 RRGKGYALDFGFRHLLNLADDPDAVVVFDADNL-VDPNALEELNARFAAG-----ARVVQAYYNSKNPDDSWITRLYAFA 134 (183)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC-CChhHHHHHHHHHhhC-----CCeeEEEEeeeCCccCHHHHHHHHH
Confidence 4469999999998631 1257999999999995 6799999999988653 246888777665443211 1112
Q ss_pred hhhhhhhhcccccCCCCc-cccccCcchhhhhh
Q 002469 446 NTVFFDINLRGLDGIQGP-VYVGTGCVFNRTAL 477 (918)
Q Consensus 446 ~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~AL 477 (918)
...++.+...++..+.+. .+.|+|.+|||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 135 FLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 222333333344444432 34566666666554
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.43 E-value=4.2e-12 Score=128.16 Aligned_cols=122 Identities=20% Similarity=0.290 Sum_probs=88.6
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchh
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~ 267 (918)
|.|.|+||||| |....+.+|+.|+++.+|| .+.|+|+|||...-|.+.+.
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~------------------------- 50 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVL------------------------- 50 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHH-------------------------
Confidence 57999999998 7667889999999999998 46799999998752111110
Q ss_pred hhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCC
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~ 347 (918)
++|.+ +
T Consensus 51 -------------------------~~~~~----------~--------------------------------------- 56 (202)
T cd04184 51 -------------------------KKYAA----------Q--------------------------------------- 56 (202)
T ss_pred -------------------------HHHHh----------c---------------------------------------
Confidence 01100 0
Q ss_pred CCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCceEEE
Q 002469 348 DAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKHVCY 426 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~~g~~va~ 426 (918)
.+++.++..+. ...++.|+|.+++. +.++|++.+|+|.+ +.|++|.+++-.+ .+| ++++
T Consensus 57 ------~~~~~~~~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~-~~~~~l~~~~~~~~~~~----~~~~ 116 (202)
T cd04184 57 ------DPRIKVVFREE-----NGGISAATNSALEL----ATGEFVALLDHDDE-LAPHALYEVVKALNEHP----DADL 116 (202)
T ss_pred ------CCCEEEEEccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCc-CChHHHHHHHHHHHhCC----CCCE
Confidence 01244554443 34589999999996 67899999999995 6899999999977 777 5667
Q ss_pred EecCccc
Q 002469 427 VQFPQRF 433 (918)
Q Consensus 427 VQ~PQ~F 433 (918)
|+.....
T Consensus 117 v~~~~~~ 123 (202)
T cd04184 117 IYSDEDK 123 (202)
T ss_pred EEccHHh
Confidence 7665443
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.37 E-value=1.4e-11 Score=124.55 Aligned_cols=65 Identities=17% Similarity=0.131 Sum_probs=51.3
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhc-CCCCCceEEEEecCccccC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGKHVCYVQFPQRFDG 435 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~-Dp~~g~~va~VQ~PQ~F~n 435 (918)
+.++.+++.. .+++|+|.+++. +.|+||+.+|+|.+ ..|++|.+++.+|. +| ++++|.......+
T Consensus 57 i~~i~~~~n~-----G~~~a~N~g~~~----a~gd~i~~lD~Dd~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~ 122 (201)
T cd04195 57 LKVVPLEKNR-----GLGKALNEGLKH----CTYDWVARMDTDDI-SLPDRFEKQLDFIEKNP----EIDIVGGGVLEFD 122 (201)
T ss_pred eEEEEcCccc-----cHHHHHHHHHHh----cCCCEEEEeCCccc-cCcHHHHHHHHHHHhCC----CeEEEcccEEEEC
Confidence 5566665533 489999999995 68999999999995 68999999999874 56 6788877665443
No 41
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.25 E-value=2.6e-11 Score=123.73 Aligned_cols=60 Identities=20% Similarity=0.119 Sum_probs=51.6
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCC
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGID 437 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d 437 (918)
-+.|..||.++++. ....++++++|+|+++ +|++|++.+.-|.|| ++++|..+.++.+.+
T Consensus 15 ~N~Kv~nL~~~~~~---~a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~ 74 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA---GAKYDYLVISDSDIRV-PPDYLRELVAPLADP----GVGLVTGLPRGVPAR 74 (175)
T ss_pred CChHHHHHHHHHHh---hCCCCEEEEECCCeeE-CHHHHHHHHHHHhCC----CCcEEEecccccCCc
Confidence 56799999999985 2789999999999975 799999999999999 788998877765544
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.22 E-value=2.2e-10 Score=113.99 Aligned_cols=55 Identities=22% Similarity=0.125 Sum_probs=43.3
Q ss_pred cchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHH-HhhcCCCCCceEEEEecCccccC
Q 002469 372 KKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAM-CFMMDPNLGKHVCYVQFPQRFDG 435 (918)
Q Consensus 372 ~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am-~ff~Dp~~g~~va~VQ~PQ~F~n 435 (918)
.+++|+|.+++. ++++||+.+|+|.. ..++.+.+.+ .+..++ +..+|.....+.+
T Consensus 62 g~~~a~n~~~~~----a~~~~v~~ld~D~~-~~~~~~~~~~~~~~~~~----~~~~v~g~~~~~~ 117 (202)
T cd06433 62 GIYDAMNKGIAL----ATGDIIGFLNSDDT-LLPGALLAVVAAFAEHP----EVDVVYGDVLLVD 117 (202)
T ss_pred CHHHHHHHHHHH----cCCCEEEEeCCCcc-cCchHHHHHHHHHHhCC----CccEEEeeeEEEc
Confidence 489999999996 68999999999996 5789999998 455677 5666766655443
No 43
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.17 E-value=6.3e-09 Score=122.03 Aligned_cols=54 Identities=24% Similarity=0.312 Sum_probs=46.2
Q ss_pred cccchHHHHHHHHHC--CcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchhHHHh
Q 002469 614 SVTEDILTGFKMHAR--GWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILF 669 (918)
Q Consensus 614 sITED~~tg~rL~~~--GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~lQill 669 (918)
.+.||-.++..|.++ |||..|+..+. ++..+|+|++.+++||+||..|++--++
T Consensus 324 ~lGEDR~LttLlLk~~~~~k~~y~~~A~--a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 324 DLGEDRWLTTLLLKQFPGYKTEYVPSAV--AYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred hcchhHHHHHHHHhhCCCceEEEccccc--ccccCCccHHHHHHHhhhccchhHhhHh
Confidence 578999988878776 89999996654 4999999999999999999999986543
No 44
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.16 E-value=1.4e-09 Score=118.49 Aligned_cols=110 Identities=20% Similarity=0.144 Sum_probs=82.8
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCchhhhhc
Q 002469 192 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQ 271 (918)
Q Consensus 192 vfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraPe~yf~~ 271 (918)
|+||||| |++..+.+|+.|+++..||.....|+|.|||++.-|.+.+.+
T Consensus 2 IIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~---------------------------- 50 (299)
T cd02510 2 VIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLE---------------------------- 50 (299)
T ss_pred EEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHH----------------------------
Confidence 7999999 887999999999999999866678999999998743332211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCCCCCCCC
Q 002469 272 KIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGLDAEG 351 (918)
Q Consensus 272 ~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g~~d~~~ 351 (918)
+...
T Consensus 51 -------------------------~~~~--------------------------------------------------- 54 (299)
T cd02510 51 -------------------------EYYK--------------------------------------------------- 54 (299)
T ss_pred -------------------------HHHh---------------------------------------------------
Confidence 0000
Q ss_pred CCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCC
Q 002469 352 NELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 352 ~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp 418 (918)
...|++.++..++ ...++.|.|.+++. +.|+||+.+|+|.. +++++|.+.+-.+..+
T Consensus 55 ~~~~~v~vi~~~~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~-~~~~wL~~ll~~l~~~ 111 (299)
T cd02510 55 KYLPKVKVLRLKK-----REGLIRARIAGARA----ATGDVLVFLDSHCE-VNVGWLEPLLARIAEN 111 (299)
T ss_pred hcCCcEEEEEcCC-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcc-cCccHHHHHHHHHHhC
Confidence 0013466665554 23589999999996 78999999999996 5899999999877543
No 45
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.16 E-value=5e-10 Score=113.43 Aligned_cols=57 Identities=14% Similarity=0.133 Sum_probs=46.3
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHh-hcCCCCCceEEEEecCccccC
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCF-MMDPNLGKHVCYVQFPQRFDG 435 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~f-f~Dp~~g~~va~VQ~PQ~F~n 435 (918)
.+.+++|+|.+++. ++++||+++|+|.+ ..|+.|.+.+.. +.+| ..+++.......+
T Consensus 64 ~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~ 121 (214)
T cd04196 64 NLGVARNFESLLQA----ADGDYVFFCDQDDI-WLPDKLERLLKAFLKDD----KPLLVYSDLELVD 121 (214)
T ss_pred CccHHHHHHHHHHh----CCCCEEEEECCCcc-cChhHHHHHHHHHhcCC----CceEEecCcEEEC
Confidence 35599999999885 78999999999995 589999999997 5666 6777877765543
No 46
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.11 E-value=2.2e-09 Score=106.64 Aligned_cols=41 Identities=20% Similarity=0.391 Sum_probs=36.5
Q ss_pred cchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCC
Q 002469 372 KKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 372 ~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp 418 (918)
.|++|+|.+++. ++++||+.+|+|.. +.|++|++.+-++ ++
T Consensus 66 ~~~~~~n~g~~~----a~g~~i~~lD~D~~-~~~~~l~~~~~~~-~~ 106 (182)
T cd06420 66 RKAKIRNKAIAA----AKGDYLIFIDGDCI-PHPDFIADHIELA-EP 106 (182)
T ss_pred hHHHHHHHHHHH----hcCCEEEEEcCCcc-cCHHHHHHHHHHh-CC
Confidence 689999999995 78999999999995 6899999999877 54
No 47
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.11 E-value=1.5e-09 Score=104.84 Aligned_cols=51 Identities=25% Similarity=0.206 Sum_probs=41.2
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCceEEEEecC
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKHVCYVQFP 430 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~~g~~va~VQ~P 430 (918)
..+++|+|.+++. .++++++.+|+|.+ +.++++.+.+-.+ .+| +++.|+..
T Consensus 60 ~g~~~a~n~~~~~----~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~~~----~~~~~~~~ 111 (166)
T cd04186 60 LGFGAGNNQGIRE----AKGDYVLLLNPDTV-VEPGALLELLDAAEQDP----DVGIVGPK 111 (166)
T ss_pred cChHHHhhHHHhh----CCCCEEEEECCCcE-ECccHHHHHHHHHHhCC----CceEEEcc
Confidence 4589999999996 58999999999996 6799999998754 455 66676554
No 48
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.07 E-value=3.9e-09 Score=108.10 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=34.6
Q ss_pred eeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCch
Q 002469 190 VDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAM 235 (918)
Q Consensus 190 VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~ 235 (918)
|.|+||+|| |+. .+..++.|+++..|+ ...|+|.|||+.+
T Consensus 1 vsvii~~~n---~~~-~l~~~l~sl~~q~~~--~~evivvdd~s~d 40 (221)
T cd02522 1 LSIIIPTLN---EAE-NLPRLLASLRRLNPL--PLEIIVVDGGSTD 40 (221)
T ss_pred CEEEEEccC---cHH-HHHHHHHHHHhccCC--CcEEEEEeCCCCc
Confidence 579999998 764 779999999999984 6789999999875
No 49
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.06 E-value=5.7e-09 Score=110.30 Aligned_cols=60 Identities=15% Similarity=0.104 Sum_probs=45.7
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFP 430 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~P 430 (918)
+.++.+++. ..|++|+|++++. +.++||+.+|+|.. .+|++|.+++..+.++ +..+|...
T Consensus 70 v~~~~~~~n-----~G~~~a~n~g~~~----a~g~~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~ 129 (243)
T PLN02726 70 ILLRPRPGK-----LGLGTAYIHGLKH----ASGDFVVIMDADLS-HHPKYLPSFIKKQRET----GADIVTGT 129 (243)
T ss_pred EEEEecCCC-----CCHHHHHHHHHHH----cCCCEEEEEcCCCC-CCHHHHHHHHHHHHhc----CCcEEEEc
Confidence 455555442 3489999999985 68999999999995 6999999999888765 34555543
No 50
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.06 E-value=3.7e-09 Score=109.23 Aligned_cols=42 Identities=14% Similarity=0.154 Sum_probs=35.6
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhH
Q 002469 192 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTF 238 (918)
Q Consensus 192 vfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~ 238 (918)
|+||+|| |+ ..+..|+-|+++.+|| +...++|.|||+..-|.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~ 42 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSA 42 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHH
Confidence 6899998 54 7999999999999999 46899999999987443
No 51
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.02 E-value=3.6e-09 Score=101.18 Aligned_cols=63 Identities=33% Similarity=0.429 Sum_probs=47.2
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHH-HhhcCCCCCceEEEEecCccc
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAM-CFMMDPNLGKHVCYVQFPQRF 433 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am-~ff~Dp~~g~~va~VQ~PQ~F 433 (918)
++++..++. ..|+.|+|.+++. .++++|+.+|+|.+ ..|++|.+.+ .++.++ +++.|+..+..
T Consensus 55 ~~~~~~~~~-----~g~~~~~n~~~~~----~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~~~----~~~~v~~~~~~ 118 (180)
T cd06423 55 VLVVRDKEN-----GGKAGALNAGLRH----AKGDIVVVLDADTI-LEPDALKRLVVPFFADP----KVGAVQGRVRV 118 (180)
T ss_pred EEEEEeccc-----CCchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHhccCC----CeeeEeeeEEE
Confidence 455555543 3599999999996 59999999999996 5799999994 466677 56666655443
No 52
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.01 E-value=3.6e-09 Score=109.70 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=45.1
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHH---Hh-hcCCCCCceEEEEecCcc
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAM---CF-MMDPNLGKHVCYVQFPQR 432 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am---~f-f~Dp~~g~~va~VQ~PQ~ 432 (918)
+.++..++..| +|+|+|.+++.+.- .+++||+.+|+|.+ .+|++|.++. .. ..++ .++.+ .|+.
T Consensus 49 i~~i~~~~n~G-----~~~a~N~g~~~a~~-~~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~~~~----~~~~~-~~~~ 116 (237)
T cd02526 49 IELIHLGENLG-----IAKALNIGIKAALE-NGADYVLLFDQDSV-PPPDMVEKLLAYKILSDKNS----NIGAV-GPRI 116 (237)
T ss_pred EEEEECCCcee-----hHHhhhHHHHHHHh-CCCCEEEEECCCCC-cCHhHHHHHHHHHHhhccCC----CeEEE-eeeE
Confidence 56666655333 99999999996321 25699999999996 5799999985 33 3345 55544 4554
Q ss_pred c
Q 002469 433 F 433 (918)
Q Consensus 433 F 433 (918)
.
T Consensus 117 ~ 117 (237)
T cd02526 117 I 117 (237)
T ss_pred E
Confidence 3
No 53
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.97 E-value=1.2e-08 Score=104.83 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=46.1
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFP 430 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~P 430 (918)
+.++..+++. .|++|+|.+++. +.++||+.+|+|.. .+|++|...+..+.++ +...|..+
T Consensus 55 i~~~~~~~n~-----G~~~a~n~g~~~----a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~ 114 (224)
T cd06442 55 VRLIVRPGKR-----GLGSAYIEGFKA----ARGDVIVVMDADLS-HPPEYIPELLEAQLEG----GADLVIGS 114 (224)
T ss_pred eEEEecCCCC-----ChHHHHHHHHHH----cCCCEEEEEECCCC-CCHHHHHHHHHHHhcC----CCCEEEEe
Confidence 4445555433 489999999996 67899999999984 6899999999987776 34455554
No 54
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.97 E-value=9.1e-09 Score=104.50 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=42.9
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccc
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRF 433 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F 433 (918)
+..+.++|.+++..- ...++|++.+|+|.+ +.|++|++.+..+.+| +++.| +|.++
T Consensus 62 ~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~-~~~~~l~~l~~~~~~~----~~~~~-~~~~~ 117 (202)
T cd04185 62 LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAI-PDPDALEKLLAYADKD----NPQFL-APLVL 117 (202)
T ss_pred cchhhHHHHHHHHHh-ccCCCEEEEeCCCCC-cChHHHHHHHHHHhcC----CceEe-cceeE
Confidence 347888998887542 467899999999995 6899999999988777 55555 34443
No 55
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.96 E-value=1e-09 Score=105.24 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=75.5
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccC
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDG 435 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n 435 (918)
++.|+.+++ +. .+++|+|.+++. ..++|++.+|+|.+ ..+++|.+.+.++.++. ..+.+...+....+
T Consensus 54 ~i~~i~~~~----n~-g~~~~~n~~~~~----a~~~~i~~ld~D~~-~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~ 121 (169)
T PF00535_consen 54 NIRYIRNPE----NL-GFSAARNRGIKH----AKGEYILFLDDDDI-ISPDWLEELVEALEKNP--PDVVIGSVIYIDDD 121 (169)
T ss_dssp TEEEEEHCC----CS-HHHHHHHHHHHH------SSEEEEEETTEE-E-TTHHHHHHHHHHHCT--TEEEEEEEEEEECT
T ss_pred ccccccccc----cc-cccccccccccc----cceeEEEEeCCCce-EcHHHHHHHHHHHHhCC--CcEEEEEEEEecCC
Confidence 488999876 33 799999999996 78899999999996 46789999999998742 14444444444333
Q ss_pred CCcccccc--chhhhhhhhhcccccCCCCccccccCcchhhhhhc
Q 002469 436 IDRNDRYA--NRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALY 478 (918)
Q Consensus 436 ~d~~d~~~--n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALy 478 (918)
........ .....++..............++|+++++||+++-
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 122 NRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp TETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred ccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 22222111 12234444455566677789999999999999884
No 56
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.74 E-value=1.9e-07 Score=104.31 Aligned_cols=110 Identities=15% Similarity=0.236 Sum_probs=82.8
Q ss_pred CCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCCCCCCc
Q 002469 186 QLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAP 265 (918)
Q Consensus 186 ~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~iepraP 265 (918)
..|.|.|+||+|| ++ ..+..++-|+++..|+ .+.|+|.|||+++-|.+-+
T Consensus 4 ~~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~------------------------ 53 (328)
T PRK10073 4 STPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIA------------------------ 53 (328)
T ss_pred CCCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHH------------------------
Confidence 3578999999998 54 6889999999999997 5789999999987332211
Q ss_pred hhhhhcccccccCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCcccccccCCCCCCCCCCCCCccceEEEecCCC
Q 002469 266 EWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENG 345 (918)
Q Consensus 266 e~yf~~~~~~~~~~~~~~f~~er~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~l~~~g 345 (918)
++|.+
T Consensus 54 ---------------------------~~~~~------------------------------------------------ 58 (328)
T PRK10073 54 ---------------------------KHYAE------------------------------------------------ 58 (328)
T ss_pred ---------------------------HHHHh------------------------------------------------
Confidence 11111
Q ss_pred CCCCCCCCCCcEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCC
Q 002469 346 GLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 346 ~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp 418 (918)
+.|++.++..+ ....++|.|.+++. +.|+||+.+|+|-++ .|+.+.+.+..+.++
T Consensus 59 -------~~~~i~vi~~~------n~G~~~arN~gl~~----a~g~yi~flD~DD~~-~p~~l~~l~~~~~~~ 113 (328)
T PRK10073 59 -------NYPHVRLLHQA------NAGVSVARNTGLAV----ATGKYVAFPDADDVV-YPTMYETLMTMALED 113 (328)
T ss_pred -------hCCCEEEEECC------CCChHHHHHHHHHh----CCCCEEEEECCCCcc-ChhHHHHHHHHHHhC
Confidence 01235555432 23589999999996 799999999999974 799999999877654
No 57
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.74 E-value=1.3e-07 Score=97.11 Aligned_cols=52 Identities=17% Similarity=0.105 Sum_probs=41.4
Q ss_pred cchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCcc
Q 002469 372 KKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQR 432 (918)
Q Consensus 372 ~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~ 432 (918)
.|++|+|.+++. +.++||+.+|+|.. ..|+++.+.+..+.++ ....|.....
T Consensus 69 G~~~a~~~g~~~----a~gd~i~~ld~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~r~ 120 (211)
T cd04188 69 GKGGAVRAGMLA----ARGDYILFADADLA-TPFEELEKLEEALKTS----GYDIAIGSRA 120 (211)
T ss_pred CcHHHHHHHHHH----hcCCEEEEEeCCCC-CCHHHHHHHHHHHhcc----CCcEEEEEee
Confidence 489999999996 68899999999995 6899999999987655 2344555433
No 58
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.70 E-value=1.3e-07 Score=93.92 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=50.2
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDG 435 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n 435 (918)
+.++..+++.| |++|+|.+++. +.+++++.+|+|-. ..|++|.+.+..+..+ +..+|+.+....+
T Consensus 56 ~~~~~~~~n~G-----~~~a~n~g~~~----a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~~~~~~ 120 (185)
T cd04179 56 VRVIRLSRNFG-----KGAAVRAGFKA----ARGDIVVTMDADLQ-HPPEDIPKLLEKLLEG----GADVVIGSRFVRG 120 (185)
T ss_pred eEEEEccCCCC-----ccHHHHHHHHH----hcCCEEEEEeCCCC-CCHHHHHHHHHHHhcc----CCcEEEEEeecCC
Confidence 45555555444 99999999996 77899999999985 5899999999986665 4567777765554
No 59
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.67 E-value=7.6e-07 Score=97.58 Aligned_cols=52 Identities=13% Similarity=0.286 Sum_probs=42.2
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcC
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMD 417 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~D 417 (918)
++.|+..++. ..++.|+|.++.. ++|+||+.+|+|.+. .|+.|.+.+-++..
T Consensus 61 ri~~i~~~~n-----~G~~~a~N~gi~~----a~g~~I~~lDaDD~~-~p~~l~~~~~~~~~ 112 (279)
T PRK10018 61 RITYIHNDIN-----SGACAVRNQAIML----AQGEYITGIDDDDEW-TPNRLSVFLAHKQQ 112 (279)
T ss_pred CEEEEECCCC-----CCHHHHHHHHHHH----cCCCEEEEECCCCCC-CccHHHHHHHHHHh
Confidence 5777776543 3489999999985 799999999999964 79999998887643
No 60
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.67 E-value=4.2e-07 Score=98.06 Aligned_cols=69 Identities=20% Similarity=0.222 Sum_probs=49.3
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCcccc
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFD 434 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~ 434 (918)
++.|+.-++.- ..|||+|.+++.. .-.+++||+.+|.|.+ +.+++|.+.+..+..+ +.+++.|. |..++
T Consensus 46 ~i~~i~~~~N~-----G~a~a~N~Gi~~a-~~~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 46 KIALIHLGDNQ-----GIAGAQNQGLDAS-FRRGVQGVLLLDQDSR-PGNAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CeEEEECCCCc-----chHHHHHHHHHHH-HHCCCCEEEEECCCCC-CCHHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 36666655433 4899999999863 1247899999999996 6799999999887543 12677775 44433
No 61
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.54 E-value=2.1e-06 Score=92.24 Aligned_cols=48 Identities=17% Similarity=0.052 Sum_probs=36.6
Q ss_pred cceeEEEecCCCCCCCHHHHHHHHHHHHcC-CCCCCCcEEEEcCCCCchhhHH
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAV-DYPVDKVSCYVSDDGAAMLTFE 239 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~-dYP~~kl~~yvsDDG~~~~t~~ 239 (918)
|.|.|+||||| |. ..+..|+.|++++ ..+...+.++|.|||.++-|.+
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 56899999998 64 5688999999864 2333468899999999874443
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.50 E-value=1.1e-06 Score=88.03 Aligned_cols=104 Identities=14% Similarity=0.212 Sum_probs=62.8
Q ss_pred EEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCC
Q 002469 357 LVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGI 436 (918)
Q Consensus 357 lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~ 436 (918)
+.++..++ ++.|++|+|++++. +.+++|+.+|+|.. ..+++|.+.+.. +++. .++.+.+-.. .+.
T Consensus 57 i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~-~~~~~l~~l~~~-~~~~--~~~v~g~~~~--~~~ 121 (181)
T cd04187 57 VKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQ-DPPELIPEMLAK-WEEG--YDVVYGVRKN--RKE 121 (181)
T ss_pred EEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCC-CCHHHHHHHHHH-HhCC--CcEEEEEecC--Ccc
Confidence 55555544 34599999999996 67899999999995 689999999987 4442 1344333222 221
Q ss_pred CccccccchhhhhhhhhcccccCCCCccccccCcchhhhhhc
Q 002469 437 DRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALY 478 (918)
Q Consensus 437 d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALy 478 (918)
....++.+. .++. ......+..-+...|+.+++||+++-
T Consensus 122 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~ 160 (181)
T cd04187 122 SWLKRLTSK--LFYR-LINKLSGVDIPDNGGDFRLMDRKVVD 160 (181)
T ss_pred hHHHHHHHH--HHHH-HHHHHcCCCCCCCCCCEEEEcHHHHH
Confidence 111111111 1111 11222334445666778899999985
No 63
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.45 E-value=3.6e-06 Score=78.48 Aligned_cols=52 Identities=27% Similarity=0.339 Sum_probs=41.6
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHH-hhcCCCCCceEEEEecC
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMC-FMMDPNLGKHVCYVQFP 430 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~-ff~Dp~~g~~va~VQ~P 430 (918)
+..|++++|.++.. .++++++++|+|.+ ..|+++...+- +..++ +...|+.+
T Consensus 62 ~~g~~~~~~~~~~~----~~~d~v~~~d~D~~-~~~~~~~~~~~~~~~~~----~~~~v~~~ 114 (156)
T cd00761 62 NQGLAAARNAGLKA----ARGEYILFLDADDL-LLPDWLERLVAELLADP----EADAVGGP 114 (156)
T ss_pred CCChHHHHHHHHHH----hcCCEEEEECCCCc-cCccHHHHHHHHHhcCC----CceEEecc
Confidence 34599999999986 48999999999995 57889988744 55566 67777776
No 64
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.42 E-value=5.6e-06 Score=90.37 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=45.7
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEEecCccccCCCcc
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRN 439 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~ 439 (918)
-.+|.|.|.++.. +++++|+.+|+|.+ +.|+++.+++-+.+.=.. ..-+++-.|..|.+.+..
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i-~~~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~ 136 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCI-PSPDFIEKLLNHVKKLDK-NPNAFLVYPCLYLSEEGS 136 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCee-eCHHHHHHHHHHHHHHhc-CCCceEEEeeeeccchhh
Confidence 3799999999996 79999999999995 689999999993211000 123566667777655433
No 65
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.28 E-value=1.9e-05 Score=88.58 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=35.7
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcC
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMD 417 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~D 417 (918)
..|++|+|++++. +.|++|+++|+|.. .+++.+.+.+-.+.+
T Consensus 148 ~G~~~A~~~Gi~~----a~gd~I~~~DaD~~-~~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 148 KGKGGAVRIGMLA----SRGKYILMVDADGA-TDIDDFDKLEDIMLK 189 (333)
T ss_pred CChHHHHHHHHHH----ccCCEEEEEeCCCC-CCHHHHHHHHHHHHH
Confidence 3599999999996 68999999999995 688998888877653
No 66
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.28 E-value=2.1e-05 Score=86.69 Aligned_cols=68 Identities=24% Similarity=0.311 Sum_probs=49.6
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCC-EEEEecCCCCCCchHHHHHHHHhhc-CCCCCceEEEEecCccc
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGP-FLLNLDCDHYINNSKALREAMCFMM-DPNLGKHVCYVQFPQRF 433 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p-~il~lD~D~~v~~~~~Lr~am~ff~-Dp~~g~~va~VQ~PQ~F 433 (918)
.+.++.-.+.-|+ ||+.|.+++.. +.++. |++.|+-|. +.++++|.+.+-.+. +| .++.|+.-...
T Consensus 57 ~v~~i~~~~NlG~-----agg~n~g~~~a--~~~~~~~~l~LN~D~-~~~~~~l~~ll~~~~~~~----~~~~~~~~i~~ 124 (305)
T COG1216 57 NVRLIENGENLGF-----AGGFNRGIKYA--LAKGDDYVLLLNPDT-VVEPDLLEELLKAAEEDP----AAGVVGPLIRN 124 (305)
T ss_pred cEEEEEcCCCccc-----hhhhhHHHHHH--hcCCCcEEEEEcCCe-eeChhHHHHHHHHHHhCC----CCeEeeeeEec
Confidence 4566666555554 89999888863 35544 999999997 578999999998664 55 67788776665
Q ss_pred cC
Q 002469 434 DG 435 (918)
Q Consensus 434 ~n 435 (918)
++
T Consensus 125 ~~ 126 (305)
T COG1216 125 YD 126 (305)
T ss_pred CC
Confidence 43
No 67
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.27 E-value=9.4e-06 Score=99.18 Aligned_cols=50 Identities=26% Similarity=0.327 Sum_probs=45.1
Q ss_pred cccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhcchh
Q 002469 614 SVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSV 665 (918)
Q Consensus 614 sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~G~l 665 (918)
+..||-.+..++..+||+.-|+.... +...+|+++.+++.||+||..|.+
T Consensus 549 ~~geDR~L~~~llskgy~l~Y~a~s~--a~t~~Pe~~~efl~QrrRW~~s~f 598 (862)
T KOG2571|consen 549 SLGEDRWLCTLLLSKGYRLKYVAASD--AETEAPESFLEFLNQRRRWLNSIF 598 (862)
T ss_pred ccchhHHHHHHHHhccceeeeecccc--ccccCcHhHHHHHHHhhhhcccch
Confidence 58999999999999999999996543 489999999999999999999943
No 68
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.15 E-value=1.2e-05 Score=89.23 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=42.4
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhc-CCCCCceEEEEec
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGKHVCYVQF 429 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~-Dp~~g~~va~VQ~ 429 (918)
+.|++|+|.+++. +++++|+.+|||....+|++|.+.+..+. || ++++|..
T Consensus 101 ~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 101 PGKGEALWRSLAA----TTGDIVVFVDADLINFDPMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred CCHHHHHHHHHHh----cCCCEEEEEeCccccCCHHHHHHHHHHHHhCC----CceEEEE
Confidence 4699999999985 78999999999984368999999998775 78 5667764
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.54 E-value=0.00067 Score=76.01 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=35.8
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhc
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM 416 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~ 416 (918)
..|++|+|++++. +.|++++.+|||.. .+|+.+.+.+-.+.
T Consensus 76 ~G~~~A~~~G~~~----A~gd~vv~~DaD~q-~~p~~i~~l~~~~~ 116 (325)
T PRK10714 76 YGQHSAIMAGFSH----VTGDLIITLDADLQ-NPPEEIPRLVAKAD 116 (325)
T ss_pred CCHHHHHHHHHHh----CCCCEEEEECCCCC-CCHHHHHHHHHHHH
Confidence 3589999999986 68999999999995 78999999988764
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.20 E-value=0.0028 Score=60.01 Aligned_cols=45 Identities=24% Similarity=0.304 Sum_probs=39.5
Q ss_pred CcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhh
Q 002469 187 LAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLT 237 (918)
Q Consensus 187 lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t 237 (918)
.|.+.|+||||| |+ .....+|.|++...|+. ..+.|.|||.+.-|
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t 46 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGT 46 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCCh
Confidence 477999999998 65 89999999999999996 55999999998743
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.16 E-value=0.0033 Score=66.21 Aligned_cols=42 Identities=14% Similarity=0.228 Sum_probs=36.0
Q ss_pred cchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCC
Q 002469 372 KKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 372 ~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp 418 (918)
..+.+.|.++.. ..+++|+.+|+|.. ..++.+.+...++.++
T Consensus 58 g~~~~~n~~~~~----a~~d~vl~lDaD~~-~~~~~~~~l~~~~~~~ 99 (229)
T cd02511 58 GFGAQRNFALEL----ATNDWVLSLDADER-LTPELADEILALLATD 99 (229)
T ss_pred ChHHHHHHHHHh----CCCCEEEEEeCCcC-cCHHHHHHHHHHHhCC
Confidence 478999999985 68899999999996 5899999998887654
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.14 E-value=0.0063 Score=68.65 Aligned_cols=157 Identities=24% Similarity=0.363 Sum_probs=110.2
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEE-ecCccccCCCccccccchhhh
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYV-QFPQRFDGIDRNDRYANRNTV 448 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~V-Q~PQ~F~n~d~~d~~~n~~~~ 448 (918)
-+-|-.||=-+.|. ...|+|++.|.|-.+ .|+.+....-=||.|+ |+|+| |+|-.++-.-
T Consensus 155 ~npKInN~mpgy~~----a~ydlvlisDsgI~m-~pdtildm~t~M~she---kmalvtq~py~~dr~G----------- 215 (431)
T KOG2547|consen 155 LNPKINNMMPGYRA----AKYDLVLISDSGIFM-KPDTILDMATTMMSHE---KMALVTQTPYCKDRQG----------- 215 (431)
T ss_pred cChhhhccCHHHHH----hcCCEEEEecCCeee-cCchHHHHHHhhhccc---ceeeecCCceeecccc-----------
Confidence 34587788778886 788999999999875 8999999888888886 89998 7776654211
Q ss_pred hhhhhcccccCCCCccccccCcchhhhhhcCCCCCCCCCCCCCCCcc--cccCCCcccCCCccccCCCcccCCCCCCCCC
Q 002469 449 FFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLS--SLFGGSRKKNSKSSKKGSDKKKSSKHVDPTV 526 (918)
Q Consensus 449 Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (918)
.|.--.-+|-||. +-|-.|-|- |- -|.
T Consensus 216 --------f~atle~~~fgTs--h~r~yl~~n-------------~~~~~c~---------------------------- 244 (431)
T KOG2547|consen 216 --------FDATLEQVYFGTS--HPRIYLSGN-------------VLGFNCS---------------------------- 244 (431)
T ss_pred --------chhhhhheeeccC--CceEEEccc-------------ccccccc----------------------------
Confidence 1111111455554 333322110 00 011
Q ss_pred ccccchhhhhcccCCCCchhhHHhhhHHHHHHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhcccccccccccc
Q 002469 527 PIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGS 606 (918)
Q Consensus 527 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGk 606 (918)
-|-|.-.++++++|.||+...
T Consensus 245 ---------------------------------tgms~~mrK~~ld~~ggi~~f-------------------------- 265 (431)
T KOG2547|consen 245 ---------------------------------TGMSSMMRKEALDECGGISAF-------------------------- 265 (431)
T ss_pred ---------------------------------ccHHHHHHHHHHHHhccHHHH--------------------------
Confidence 156777899999999997652
Q ss_pred ccCcccccccchHHHHHHHHHCCcEEEEeCCCCCcccccCCCCHHHHHHHhhhhhc
Q 002469 607 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 662 (918)
Q Consensus 607 evGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~tl~~~l~QR~RWa~ 662 (918)
.+.+.||+..+=.+..+||++.+..-.. -...+-.+...+..|-.||..
T Consensus 266 -----~~yLaedyFaaksllSRG~ksaist~pa--lQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 266 -----GGYLAEDYFAAKSLLSRGWKSAISTHPA--LQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred -----HHHHHHHHHHHHHHHhhhhhhhhcccch--hhhhhhhHHHHHHHHHHHhhh
Confidence 2489999999999999999999996533 246666888888998899963
No 73
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=95.44 E-value=0.17 Score=57.53 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=34.6
Q ss_pred eEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCch
Q 002469 191 DIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAM 235 (918)
Q Consensus 191 DvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~ 235 (918)
-|+|.||| - |.-+..|+-|+++..+-.+...+||++||+..
T Consensus 3 PVlv~ayN---R-p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~ 43 (334)
T cd02514 3 PVLVIACN---R-PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE 43 (334)
T ss_pred CEEEEecC---C-HHHHHHHHHHHHhccccCCCceEEEEeCCCch
Confidence 47889997 4 68999999999998755567889999999875
No 74
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=93.69 E-value=0.36 Score=50.59 Aligned_cols=53 Identities=19% Similarity=0.311 Sum_probs=39.4
Q ss_pred cEEEEecccCCCCCcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhhcCC
Q 002469 356 RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 356 ~lvYvsRekrpg~~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp 418 (918)
++.-..|.+.-|. .-|--+++.+ ..|+|+++.|||- .-+|+++-+.+....+-
T Consensus 64 ~i~l~pR~~klGL-----gtAy~hgl~~----a~g~fiviMDaDl-sHhPk~ipe~i~lq~~~ 116 (238)
T KOG2978|consen 64 NILLKPRTKKLGL-----GTAYIHGLKH----ATGDFIVIMDADL-SHHPKFIPEFIRLQKEG 116 (238)
T ss_pred cEEEEeccCcccc-----hHHHHhhhhh----ccCCeEEEEeCcc-CCCchhHHHHHHHhhcc
Confidence 4777788875552 2244455554 7899999999998 67899999988877665
No 75
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=91.41 E-value=4.1 Score=51.15 Aligned_cols=102 Identities=25% Similarity=0.342 Sum_probs=69.0
Q ss_pred HHhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeC
Q 002469 557 EKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCM 636 (918)
Q Consensus 557 ~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~ 636 (918)
+-+||+..+|-+--....||++.. . | .=.++||+..|+....||-++.++
T Consensus 381 rlHYGHPD~~n~~f~~TRGGvSKA----------s--------------k-----~lhLsEDIfaG~n~~lRGG~i~h~- 430 (817)
T PF02364_consen 381 RLHYGHPDVFNRIFMTTRGGVSKA----------S--------------K-----GLHLSEDIFAGMNATLRGGRIKHC- 430 (817)
T ss_pred hccCCCchhhhhhheeccCccchH----------h--------------h-----cccccHHHHHHHHHHhcCCceeeh-
Confidence 346787777777777778998751 1 1 128899999999999999999999
Q ss_pred CCCCcccccCCC-CHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchhhhh
Q 002469 637 PKRPAFKGSAPI-NLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVN 693 (918)
Q Consensus 637 p~~~a~~G~aP~-tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~Yl~ 693 (918)
+-.. .|..-+ .+..-..=-..-+.|+=+..+++.--.+ +.+|.+-+-+++..
T Consensus 431 ey~q--cGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL---g~~ld~~R~LSfyy 483 (817)
T PF02364_consen 431 EYIQ--CGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL---GTRLDFFRFLSFYY 483 (817)
T ss_pred hhhh--cccccccCchhhhhhHhHhcCCccchhhhHHHHHh---hccCCHHHHHHHHh
Confidence 4443 455432 2333333445789999888887742222 66788776665443
No 76
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=80.28 E-value=25 Score=39.46 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=29.9
Q ss_pred cchhhhHHHHHhhcccCCCCEEEEecCCCC--CCchHHHHHHHHhhc
Q 002469 372 KKAGAMNALVRVSAVLTNGPFLLNLDCDHY--INNSKALREAMCFMM 416 (918)
Q Consensus 372 ~KAGalNallrvs~v~tn~p~il~lD~D~~--v~~~~~Lr~am~ff~ 416 (918)
.|.||..-.+- .+-|.+++..|||-- +++-..|.++|.=..
T Consensus 144 gKGgAvR~g~l----~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 144 GKGGAVRKGML----SSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred CCCcceehhhH----hccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 48888775554 378999999999962 456677888876443
No 77
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=75.05 E-value=9.1 Score=40.88 Aligned_cols=45 Identities=27% Similarity=0.382 Sum_probs=36.6
Q ss_pred CcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCC
Q 002469 371 HKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPN 419 (918)
Q Consensus 371 h~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ff-~Dp~ 419 (918)
..-|-+.|++++. +.++|++-+.-|.++.+++++.+++-.| .||+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~ 85 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN 85 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC
Confidence 4478899999995 8999999999999999999999999988 8994
No 78
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=56.38 E-value=25 Score=40.54 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=29.4
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHHH
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMC 413 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am~ 413 (918)
...|+-.|=-++-... ..+.+||-.+|||.|+| .++.|=+-
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyiP--GaV~EYvk 182 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYIP--GAVNEYVK 182 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCCC--chHHHHHH
Confidence 4568888875444332 35889999999999985 56776443
No 79
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=55.64 E-value=54 Score=38.30 Aligned_cols=48 Identities=17% Similarity=0.075 Sum_probs=37.4
Q ss_pred CCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCC
Q 002469 183 EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGA 233 (918)
Q Consensus 183 ~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~ 233 (918)
.|.+||++.|+|.-.| |--...++||-|++.-.=|.=--.|.+.||=.
T Consensus 150 Ype~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfS 197 (603)
T KOG3737|consen 150 YPENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFS 197 (603)
T ss_pred CcccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCC
Confidence 4688999999999998 99999999999998765443233466777743
No 80
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=51.97 E-value=18 Score=44.22 Aligned_cols=50 Identities=16% Similarity=0.076 Sum_probs=42.2
Q ss_pred CCCCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCch
Q 002469 183 EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAM 235 (918)
Q Consensus 183 ~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~ 235 (918)
..+.||++-|+|+-+| |...+...||-|+...-=|.---.+.|.||+...
T Consensus 137 ~~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 137 YSDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 3466999999999999 9999999999998887666556678999998764
No 81
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=51.16 E-value=23 Score=32.05 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=19.7
Q ss_pred chhhhHHHHHhhcccCCCCEEEEecCCCCC
Q 002469 373 KAGAMNALVRVSAVLTNGPFLLNLDCDHYI 402 (918)
Q Consensus 373 KAGalNallrvs~v~tn~p~il~lD~D~~v 402 (918)
+...+|++.+. ..+++.++.+|||-++
T Consensus 58 ~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 58 QRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred HHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 44466666653 3588999999999874
No 82
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=45.84 E-value=60 Score=37.44 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=29.0
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHH
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAM 412 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am 412 (918)
...|+-.|=-++-... ..+.+||-.+|||.|+| .++.|=+
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyiP--GaV~EYv 180 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYFP--GAVNEYV 180 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCCC--chHHHHH
Confidence 4569888875544332 35899999999999985 5676644
No 83
>COG4707 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.88 E-value=8 Score=36.46 Aligned_cols=44 Identities=41% Similarity=0.678 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhhhhhccCCcccccccCC-------CCCCCCCCCCCccceEEEecCCCC
Q 002469 292 KREYEEFKIRINGLVAKAQKIPEEGWVMQDG-------TPWPGNNTRDHPGMIQVFLGENGG 346 (918)
Q Consensus 292 kr~yee~k~ri~~l~~~~~~~p~~~w~m~dg-------~~w~~~~~rdhp~~iqv~l~~~g~ 346 (918)
|.||+|+|+. . -++|+|+|= +.|.-.|--.||.+.+-|--.+||
T Consensus 20 k~eyqel~~~-------~----~d~W~m~Dlk~k~~~~sd~tiknlL~hPrl~k~L~iengG 70 (107)
T COG4707 20 KVEYQELKEK-------D----FDGWVMMDLKEKKSNRSDWTIKNLLLHPRLKKMLSIENGG 70 (107)
T ss_pred HHHHHHHHHh-------h----hcchhhhHHHHHhcccchhHHHHHhcCchhhhheeeecCc
Confidence 5699998752 1 358999874 456655567899999888777774
No 84
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=39.82 E-value=24 Score=39.06 Aligned_cols=41 Identities=29% Similarity=0.412 Sum_probs=29.9
Q ss_pred hHhHhhhhhccCCCCCCCcceeEEEecCCCCCCCHHHHHHHH
Q 002469 170 YLDRLSLRYEREGEPSQLAAVDIFVSTVDPLKEPPLVTANTV 211 (918)
Q Consensus 170 ~~drL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~v~~nTv 211 (918)
-+|+|++-++.-.+...+|.|=|||+ +||...++.++++-|
T Consensus 158 ELeKm~~~Vd~i~~~~~~~~~PlFIs-vDPeRD~~~~~~eY~ 198 (280)
T KOG2792|consen 158 ELEKMSAVVDEIEAKPGLPPVPLFIS-VDPERDSVEVVAEYV 198 (280)
T ss_pred HHHHHHHHHHHHhccCCCCccceEEE-eCcccCCHHHHHHHH
Confidence 46777776654334567888878886 799999998887744
No 85
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=37.31 E-value=2.9e+02 Score=30.09 Aligned_cols=60 Identities=22% Similarity=0.414 Sum_probs=45.9
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhcCC
Q 002469 192 IFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNI 260 (918)
Q Consensus 192 vfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvpfCkk~~i 260 (918)
|+|+|-. ..|.|+-.|+.++.+-.++.+.+.+.=-.||...+...-| .-+++ -||+.|+.
T Consensus 4 iLlatlG---~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll--~g~~~----~l~~~y~~ 63 (224)
T PF09623_consen 4 ILLATLG---TSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLL--DGGLQ----RLCQDYYL 63 (224)
T ss_pred EEEEecC---CCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHH--HHHHH----HHHHhhcC
Confidence 7889987 7778999999999999999999888888888877644444 01123 38888865
No 86
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=32.93 E-value=51 Score=38.17 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=25.6
Q ss_pred cCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHH
Q 002469 370 HHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAM 412 (918)
Q Consensus 370 hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am 412 (918)
.+.|+-.|=-++-... ..+.+||-.+|||.|+ |.++.|=.
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYv 180 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYV 180 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHH
Confidence 3459998886554433 3788999999999997 56777643
No 87
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=30.53 E-value=59 Score=36.88 Aligned_cols=40 Identities=13% Similarity=0.177 Sum_probs=27.9
Q ss_pred cCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCceEEEE
Q 002469 387 LTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYV 427 (918)
Q Consensus 387 ~tn~p~il~lD~D~~v~~~~~Lr~am~ff~Dp~~g~~va~V 427 (918)
.+..+|++++|.|+ +|.+++-+....+..--....+.+||
T Consensus 125 ~a~T~~v~~~DvD~-~ps~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 125 GARTDYVFLLDVDF-LPSPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred hcCcceEEEeccee-eeCcchHHHHHHHhhhhccCCceEEE
Confidence 36789999999999 57777666666655433234477776
No 88
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=29.73 E-value=4e+02 Score=29.94 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=35.6
Q ss_pred CCCcceeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEE-EEcCCCC-chhhHHHhhh
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSC-YVSDDGA-AMLTFEALSE 243 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~-yvsDDG~-~~~t~~~l~E 243 (918)
.+-++|=|+.|--| +++ ..-.=.-.+..++||++.+++ .+..|.. -.-|.+.|.+
T Consensus 22 ~~~e~VLILtplrn--a~~--~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~ 78 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AAS--FLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEA 78 (269)
T ss_pred ccCCeEEEEEecCC--chH--HHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHH
Confidence 45678888888877 454 355666678888999998777 3333333 2445555543
No 89
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=29.41 E-value=2.2e+02 Score=30.47 Aligned_cols=60 Identities=15% Similarity=0.289 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCc--hhHhHHHHHHHHHHHHHHHHHhhc-CCCCCch
Q 002469 820 PTTLLVINLVGVVAGVSYAINSGYQSWGP--LFGKLFFAFWVIVHLYPFLKGLMG-RQNRTPT 879 (918)
Q Consensus 820 ~~~LlilnLvaiv~gi~r~~~~~~~~~~~--l~~~l~~~~Wvv~nl~p~l~aL~g-R~~~~P~ 879 (918)
=..|+++.+++++-|+.-+++......|- +....+..++++|.+|-+.--+.+ |..|.++
T Consensus 99 DssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~ 161 (226)
T COG4858 99 DSSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGT 161 (226)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCch
Confidence 44577888899999998888655544442 334456677888888777665655 4456666
No 90
>COG4818 Predicted membrane protein [Function unknown]
Probab=28.95 E-value=3.3e+02 Score=26.14 Aligned_cols=26 Identities=31% Similarity=0.453 Sum_probs=19.3
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCCCc
Q 002469 767 IGGVSSHLFAVFQGLLKVLAGIDTNF 792 (918)
Q Consensus 767 i~~vs~~lfav~~allk~L~g~~~~F 792 (918)
+.+..+++++.+.+++-.+.-++.+|
T Consensus 5 iegaLCY~lgwitGllFlllEre~~F 30 (105)
T COG4818 5 IEGALCYLLGWITGLLFLLLERESKF 30 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHhhccCcc
Confidence 35566888888888887777666666
No 91
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=28.73 E-value=1.4e+02 Score=37.65 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=29.8
Q ss_pred CcCcchhhhHHHHHhhcccCCCCEEEEecCCCCCCchHHHHHHH
Q 002469 369 QHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAM 412 (918)
Q Consensus 369 ~hh~KAGalNallrvs~v~tn~p~il~lD~D~~v~~~~~Lr~am 412 (918)
-...|+-.|=-++-... ..+.+||-.+|||.|+| .++.|=+
T Consensus 145 vr~gk~egm~~g~~la~-~~g~~yvgfidadny~p--g~v~ey~ 185 (694)
T PRK14502 145 IRSGKAEGMILGIILTM-FSGRDYVGFIDTDNYIP--GAVWEYA 185 (694)
T ss_pred eecCcchHHHHHHHHHH-hcCCceEeEeeccCCCC--chHHHHH
Confidence 34569988875544332 58899999999999985 5666644
No 92
>PF07851 TMPIT: TMPIT-like protein; InterPro: IPR012926 A number of members of this family are annotated as being transmembrane proteins induced by tumour necrosis factor alpha, but no literature was found to support this. ; GO: 0016021 integral to membrane
Probab=26.25 E-value=1e+03 Score=27.59 Aligned_cols=18 Identities=22% Similarity=0.652 Sum_probs=13.2
Q ss_pred hhccccccccccccchhh
Q 002469 748 MRWSGVGIDEWWRNEQFW 765 (918)
Q Consensus 748 ~~wsg~si~~wWr~q~~W 765 (918)
.+-.|-+++.||..+.++
T Consensus 172 L~~NGS~Ik~WW~~HHy~ 189 (330)
T PF07851_consen 172 LIVNGSRIKGWWVFHHYI 189 (330)
T ss_pred hccCCCcchHHHHHHHHH
Confidence 345577888999887776
No 93
>PF15050 SCIMP: SCIMP protein
Probab=24.10 E-value=79 Score=31.25 Aligned_cols=40 Identities=23% Similarity=0.587 Sum_probs=25.4
Q ss_pred cccccchhhhhhhhHHHHHHH-----HHHHHHHHcCCCCCceeccC
Q 002469 757 EWWRNEQFWVIGGVSSHLFAV-----FQGLLKVLAGIDTNFTVTSK 797 (918)
Q Consensus 757 ~wWr~q~~W~i~~vs~~lfav-----~~allk~L~g~~~~F~VTpK 797 (918)
+|||+ .||+|-++...+..+ +-.+...+.++..+|+++.-
T Consensus 2 ~WWr~-nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp 46 (133)
T PF15050_consen 2 SWWRD-NFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKP 46 (133)
T ss_pred chHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccc
Confidence 58985 799887765443322 22334555667788988863
No 94
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=24.03 E-value=2.3e+02 Score=28.30 Aligned_cols=18 Identities=22% Similarity=0.374 Sum_probs=15.2
Q ss_pred chhHHHhhHHHhhhhccc
Q 002469 40 NVAWKERVDGWKMKQEKN 57 (918)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~ 57 (918)
|...+.|++.=|.+|+++
T Consensus 21 s~E~~a~le~Lr~~~ee~ 38 (142)
T PF11712_consen 21 SPELKARLERLRAEQEER 38 (142)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 788999999999888643
No 95
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=23.92 E-value=60 Score=35.17 Aligned_cols=81 Identities=19% Similarity=0.212 Sum_probs=54.3
Q ss_pred HhhCchhHHHHhHhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCcEEEEeCC
Q 002469 558 KRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMP 637 (918)
Q Consensus 558 ~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~scgYe~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p 637 (918)
..+|-...+.++.+.+++|+++. .| || | .||-+++.||...|.+......
T Consensus 110 ~~~Gg~~~~~k~~f~~VNGf~n~----------------------f~----GW--G--gEDdd~~~Rl~~~g~~~~r~~~ 159 (219)
T cd00899 110 TYFGGVLALTREQFRKVNGFSNA----------------------YW----GW--G--GEDDDLYNRIKAAGLKITRPSG 159 (219)
T ss_pred cccccceeeEHHHHHHhCCcCCc----------------------Cc----cC--C--cchHHHHHHHHHCCCeEEeccC
Confidence 34677777888889999999862 22 34 2 3899999999999988766632
Q ss_pred CCC----c------ccccCCCCHHHHHHHhhhhhcchhHHH
Q 002469 638 KRP----A------FKGSAPINLSDRLNQVLRWALGSVEIL 668 (918)
Q Consensus 638 ~~~----a------~~G~aP~tl~~~l~QR~RWa~G~lQil 668 (918)
... . -....|.-+.....++.||+..++..+
T Consensus 160 ~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 160 DTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 211 0 012344455566677888887777655
No 96
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=21.39 E-value=1.9e+03 Score=30.43 Aligned_cols=83 Identities=25% Similarity=0.358 Sum_probs=50.1
Q ss_pred cccchHHHHHHHHHCCcEEEEeCCCCCcccccCCC-CHHHHHHHhhhhhcchhHHHhhcccccccccCCCCCcccchh-h
Q 002469 614 SVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPI-NLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFA-Y 691 (918)
Q Consensus 614 sITED~~tg~rL~~~GwrsvY~~p~~~a~~G~aP~-tl~~~l~QR~RWa~G~lQill~k~~PL~~g~~~~L~~~QRL~-Y 691 (918)
.+.||+..||....||-++.+| +-.. .|..-+ .+..-..=-..-+.|+=|..+++. .|..+.++.+-.-|+ |
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~-EYiQ--vGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd---~YrLG~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHH-EYIQ--VGKGRDVGLNQISNFEAKIANGNGEQTLSRD---YYRLGTQLDFFRMLSFY 1246 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccc-eeee--cccccccCcchhhhhhhhhcCCCcchhhhHH---HHHhcccccHHHHHHHH
Confidence 7899999999999999999888 4322 233221 111112223456889888887764 222356677766665 3
Q ss_pred hhhhhhhhhHH
Q 002469 692 VNTTIYPLTAI 702 (918)
Q Consensus 692 l~~~ly~l~sl 702 (918)
+.+.-+++.++
T Consensus 1247 ftt~GF~~n~m 1257 (1679)
T KOG0916|consen 1247 FTTVGFYFNNM 1257 (1679)
T ss_pred hccccHHHHhH
Confidence 33333455554
No 97
>COG4226 HicB Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=20.68 E-value=1e+02 Score=29.97 Aligned_cols=17 Identities=47% Similarity=1.015 Sum_probs=14.5
Q ss_pred hhHhHHHhcCCCCCCch
Q 002469 250 KWVPFCKKYNIEPRAPE 266 (918)
Q Consensus 250 ~WvpfCkk~~iepraPe 266 (918)
-.+.||++-++|||.|.
T Consensus 53 ~yle~C~~~g~EP~k~~ 69 (111)
T COG4226 53 DYLEFCKERGIEPRKPY 69 (111)
T ss_pred HHHHHHHHcCCCCcccc
Confidence 45689999999999983
Done!