Query 002469
Match_columns 918
No_of_seqs 326 out of 1950
Neff 5.3
Searched_HMMs 29240
Date Tue Mar 26 15:44:57 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002469.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1192-1195//hhsearch_pdb/002469hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 1.0 1 1 455.7 49.7 495 110-875 66-578 (802)
2 2z86_A Chondroitin synthase; G 1.0 1 1 134.5 17.1 129 184-437 89-218 (625)
3 2d7i_A Polypeptide N-acetylgal 1.0 1 1 122.0 15.8 116 184-418 108-224 (570)
4 1xhb_A Polypeptide N-acetylgal 1.0 1 1 121.1 16.1 117 183-418 24-143 (472)
5 2ffu_A Ppgalnact-2, polypeptid 1.0 1 1 118.6 12.8 113 184-418 62-174 (501)
6 2z86_A Chondroitin synthase; G 1.0 1 1 115.2 12.2 125 185-436 372-497 (625)
7 1qg8_A Protein (spore coat pol 1.0 1 1 112.1 6.7 124 188-434 1-129 (255)
8 3l7i_A Teichoic acid biosynthe 1.0 1 1 107.4 0.0 118 187-429 1-118 (729)
9 3bcv_A Putative glycosyltransf 1.0 1 1 105.6 11.7 111 185-418 2-112 (240)
10 4fix_A UDP-galactofuranosyl tr 1.0 1 1 97.2 11.6 128 183-429 175-304 (657)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=1.00 E-value=1 Score=455.72 Aligned_cols=495 Identities=22% Similarity=0.343 Sum_probs=377.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 47999999999999998871046532-----5799999999999999999984204555445520576865421148999
Q 002469 110 YRMVIFLRLIILGIFLYYRIKNPVHN-----AIALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLSLRYEREGEP 184 (918)
Q Consensus 110 ~R~~~~~~l~~~~~yl~wRi~~~~~~-----a~~~wl~~~~~E~~f~~~wil~~~~kw~pi~R~~~~~rL~~r~~~~~~~ 184 (918)
..+++++.+++.++|++||++.+++. +.++|+.++++|+++.+.|++..+..|.|..|.+.++ .++
T Consensus 66 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~~ 136 (802)
T 4hg6_A 66 RFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQP 136 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------CCC
T ss_conf 78999999999999999986600677530589999999999999999999999999836567888898---------985
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99962169994689999997999999999883979999727998079981333898665598742217677750898899
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 264 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepra 264 (918)
+++|.|+|+||||| |++.++.+|+.|++++|||.+++.++|.|||.++.|.+.
T Consensus 137 ~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------ 189 (802)
T 4hg6_A 137 EELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------ 189 (802)
T ss_dssp TTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------
T ss_pred CCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC------------------------
T ss_conf 67984899999799---989999999999984669998289999989987642234------------------------
Q ss_pred CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 10110001232348788224999999999999999999776663205884443446899899998788965357873379
Q 002469 265 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 344 (918)
Q Consensus 265 Pe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~~ 344 (918)
.+|+.+++... .++++ +.++++
T Consensus 190 ---------------~d~~i~~~~~~---~~~~l----~~~~~~------------------------------------ 211 (802)
T 4hg6_A 190 ---------------PDPELAQKAQE---RRREL----QQLCRE------------------------------------ 211 (802)
T ss_dssp ---------------SSHHHHHHHHH---HHHHH----HHHHHH------------------------------------
T ss_pred ---------------CCHHHHHHHHH---HHHHH----HHHHHH------------------------------------
T ss_conf ---------------88789999886---66999----999985------------------------------------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCCE
Q ss_conf 98787889878289996025999886761114489998601368997999944999889459999999844-28999950
Q 002469 345 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKH 423 (918)
Q Consensus 345 g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff-~Dp~~g~~ 423 (918)
.++.|+.|++ +++.||||+|.+++. +++|||+.+|||+. ..|++|++.+.+| .|| +
T Consensus 212 ----------~~v~~i~~~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp----~ 268 (802)
T 4hg6_A 212 ----------LGVVYSTRER----NEHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDP----D 268 (802)
T ss_dssp ----------HTCEEEECSS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS----S
T ss_pred ----------CCCEEEEECC----CCCCCHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHCCC----C
T ss_conf ----------6947999268----877636899999996----59999999999988-18589999999984099----8
Q ss_pred EEEEECCCCCCCCCCC-------CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 7999037201499964-------100001234565430222378985201457201243101789999989999987544
Q 002469 424 VCYVQFPQRFDGIDRN-------DRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHRKPGLLSS 496 (918)
Q Consensus 424 va~VQ~PQ~F~n~d~~-------Dr~~n~~~vFf~i~~~glDg~qgp~yvGTg~v~RR~ALyg~~~~~~~~~~~~~~~~~ 496 (918)
++.||+|+.+.|.++. +++.+++..|+...+.+.+.+++++++|+++++||+++.
T Consensus 269 v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~------------------ 330 (802)
T 4hg6_A 269 LFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD------------------ 330 (802)
T ss_dssp CCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH------------------
T ss_pred EEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH------------------
T ss_conf 59996567976785576544477651678999988887547643884542664032499999------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
Q ss_conf 34787655777666688754678888999765440021100268887604677665778977507506899867654089
Q 002469 497 LFGGSRKKNSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGG 576 (918)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~s~l~e~Gg 576 (918)
+.||
T Consensus 331 ----------------------------------------------------------------------------~vGg 334 (802)
T 4hg6_A 331 ----------------------------------------------------------------------------EAGG 334 (802)
T ss_dssp ----------------------------------------------------------------------------HHTT
T ss_pred ----------------------------------------------------------------------------HCCC
T ss_conf ----------------------------------------------------------------------------7088
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99986436699998883134655445445434721344332189999999899589996789874335689799999987
Q 002469 577 VPQSATHETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQ 656 (918)
Q Consensus 577 ~~~~~~~~~~~~ea~~v~sc~Ye~~t~wG~evGw~y~sITED~~Ts~rL~~~GWrsvY~~p~~~a~~G~aP~tl~~~l~Q 656 (918)
+++ ++++||.+++++++.+||++.|+++.. +++.+|+++.++++|
T Consensus 335 f~~---------------------------------~~~~ED~~l~~rl~~~G~ri~~~~~~~--~~~~~p~t~~~~~~Q 379 (802)
T 4hg6_A 335 FAG---------------------------------ETITEDAETALEIHSRGWKSLYIDRAM--IAGLQPETFASFIQQ 379 (802)
T ss_dssp CCC---------------------------------SSSSHHHHHHHHHHTTTCCEEECCCCC--EEECCCCSHHHHHHH
T ss_pred CCC---------------------------------CCCCHHHHHHHHHHHCCCEEEEECCCE--EEECCCCCHHHHHHH
T ss_conf 678---------------------------------880309999999997699599936887--996688899999999
Q ss_pred HHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-
Q ss_conf 6664210067876204521113589888344146566655665689999999999999970785200230579999999-
Q 002469 657 VLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYVNTTIYPLTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFIS- 735 (918)
Q Consensus 657 R~RWA~G~lqil~~k~~Pl~~g~~~~Lt~~QRL~Yl~~~ly~l~sl~~liy~llPil~LltGi~iip~~s~~~l~~fi~- 735 (918)
|.||++|.+|+++. ++|++ .+++++.||++|+....+++.+++.++++++|++++++++.++......++.+++.
T Consensus 380 r~RW~~G~~q~l~~-~~pl~---~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~ 455 (802)
T 4hg6_A 380 RGRWATGMMQMLLL-KNPLF---RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGY 455 (802)
T ss_dssp HHHHHHHHHHHHHH-SCTTS---CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHH-HCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99997008999988-59234---689989999999999999999999999999999999996787633899999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCEECCCCCCCCCCCCEEEEECCC
Q ss_conf 99999999988743036434322233204555456899999999999-99839988816466888888774203430231
Q 002469 736 LFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLL-KVLAGIDTNFTVTSKASDEDGDFTELYMFKWT 814 (918)
Q Consensus 736 l~ls~~~~~lLe~~w~g~si~~wWr~e~~W~i~~vsa~lfav~~all-k~L~g~~~~F~VTpKg~~~d~~~~~l~~f~ws 814 (918)
+++...+...+. ... ...|| ++.++ +...++ .+.+++ ..+.+++.+|+||+|+...+..+ + +
T Consensus 456 ~l~~~~~~~~~~---~~~-r~~~~-~~l~~----~~~~~~-~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~~-----~-~- 518 (802)
T 4hg6_A 456 LAVSFLVQNALF---ARQ-RWPLV-SEVYE----VAQAPY-LARAIVTTLLRPRSARFAVTAKDETLSENY-----I-S- 518 (802)
T ss_dssp HHHHHHHHHHHH---TTT-SCTTH-HHHHH----HHHHHH-HHHHHHHHHHSTTCCCCCCCCCCCCCSSCC-----B-C-
T ss_pred HHHHHHHHHHHH---CCC-HHHHH-HHHHH----HHHHHH-HHHHHHHHHHCCCCCCCEECCCCCCCCCCC-----H-H-
T ss_conf 999999999995---674-79999-99999----999999-999999999188898202779976566531-----2-2-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---CCCC
Q ss_conf 104899999999999999999998832878888323869999999998999998761---3789
Q 002469 815 TLLIPPTTLLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLM---GRQN 875 (918)
Q Consensus 815 ~l~iP~~~LlilnLiaiv~Gi~r~i~~~~~~~g~l~~~l~~~~Wvv~nl~p~l~aL~---gR~~ 875 (918)
.++.|++++++++++++++|+++....+. +..+.+++++|+++|++.+..++. +|++
T Consensus 519 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~ 578 (802)
T 4hg6_A 519 PIYRPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGFALRAVAEKQQ 578 (802)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHHHHTTTBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 68999999999999999999999960677----6342001159999999999999999745887
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=134.47 Aligned_cols=129 Identities=19% Similarity=0.206 Sum_probs=98.7
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99996216999468999999799999999988397999972799807998133389866559874221767775089889
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepr 263 (918)
+...|.|+|+||||| |+ ..+..|+.|+++.+||. ...++|.|||.++-|.+.+.+
T Consensus 89 ~~~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~-------------------- 143 (625)
T 2z86_A 89 QLIIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE-------------------- 143 (625)
T ss_dssp -CCCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT--------------------
T ss_pred CCCCCCEEEEEECCC---CH-HHHHHHHHHHHHHCCCC-CEEEEEEECCCCHHHHHHHHH--------------------
T ss_conf 346982799990388---57-88999999998436579-869999967983207999998--------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 91011000123234878822499999999999999999977666320588444344689989999878896535787337
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~ 343 (918)
+.
T Consensus 144 -----------------------------------------~~------------------------------------- 145 (625)
T 2z86_A 144 -----------------------------------------FE------------------------------------- 145 (625)
T ss_dssp -----------------------------------------TT-------------------------------------
T ss_pred -----------------------------------------HH-------------------------------------
T ss_conf -----------------------------------------56-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCCCC
Q ss_conf 9987878898782899960259998867611144899986013689979999449998894599999998442-899995
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGK 422 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~-Dp~~g~ 422 (918)
.-+++.|+.+++ +.+.||+|+|.+++. +.|+||+.+|+|+. ..|++|.+.+..|. +|
T Consensus 146 ---------~~~~i~~i~~~~----~~~g~~~a~N~g~~~----a~g~~v~~lD~D~~-~~~~~l~~~~~~~~~~~---- 203 (625)
T 2z86_A 146 ---------SLLNIKYVRQKD----YGYQLCAVRNLGLRA----AKYNYVAILDCDMA-PNPLWVQSYMELLAVDD---- 203 (625)
T ss_dssp ---------TTSCEEEEEECC----CSCCHHHHHHHHHHH----CCSSEEEEECTTEE-ECTTHHHHHHHHHHHCT----
T ss_pred ---------HCCCEEEEEECC----CCCCHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHCCC----
T ss_conf ---------317829998678----774306899999986----88478999789877-79799999999985598----
Q ss_pred EEEEEECCCCCCCCC
Q ss_conf 079990372014999
Q 002469 423 HVCYVQFPQRFDGID 437 (918)
Q Consensus 423 ~va~VQ~PQ~F~n~d 437 (918)
.++.|+..+.+++..
T Consensus 204 ~~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 204 NVALIGPRKYIDTSK 218 (625)
T ss_dssp TEEEECCEEEECCTT
T ss_pred CEEEEEEEEECCCCC
T ss_conf 639998556516742
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=1.00 E-value=1 Score=122.00 Aligned_cols=116 Identities=19% Similarity=0.128 Sum_probs=90.6
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999962169994689999997999999999883979999727998079981333-8986655987422176777508988
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLT-FEALSETSEFARKWVPFCKKYNIEP 262 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t-~~~l~E~~~fA~~WvPfCkk~~iep 262 (918)
++.+|.|.|+||||| |+...+..||.|+++..||.....+.|.|||..+-| .+.+.
T Consensus 108 ~~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~-------------------- 164 (570)
T 2d7i_A 108 LETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLE-------------------- 164 (570)
T ss_dssp ESSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHH--------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHH--------------------
T ss_conf 888997599999789---878999999999983587457679999989998378899999--------------------
Q ss_pred CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 99101100012323487882249999999999999999997766632058844434468998999987889653578733
Q 002469 263 RAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLG 342 (918)
Q Consensus 263 raPe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~ 342 (918)
++ ++
T Consensus 165 ----------------------------------~~-------~~----------------------------------- 168 (570)
T 2d7i_A 165 ----------------------------------DY-------MA----------------------------------- 168 (570)
T ss_dssp ----------------------------------HH-------HT-----------------------------------
T ss_pred ----------------------------------HH-------HH-----------------------------------
T ss_conf ----------------------------------99-------97-----------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 7998787889878289996025999886761114489998601368997999944999889459999999844289
Q 002469 343 ENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 343 ~~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~Dp 418 (918)
..|++.++..+++.| +++|+|.+++. +.|+||+.+|+|.. .+|++|.+.+-.+.+.
T Consensus 169 ----------~~~~v~vi~~~~n~G-----~~~A~N~G~~~----A~gd~i~fLD~D~~-~~p~~L~~ll~~l~~~ 224 (570)
T 2d7i_A 169 ----------LFPSVRILRTKKREG-----LIRTRMLGASV----ATGDVITFLDSHCE-ANVNWLPPLLDRIARN 224 (570)
T ss_dssp ----------TSTTEEEEECSSCCC-----HHHHHHHHHHH----CCSSEEEECCSSEE-ECTTCSHHHHHHHHHC
T ss_pred ----------HCCEEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCCC-CCCCHHHHHHHHHHHC
T ss_conf ----------478089998998879-----89999999986----67888999759852-2403899999999848
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=1.00 E-value=1 Score=121.14 Aligned_cols=117 Identities=17% Similarity=0.121 Sum_probs=91.5
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999996216999468999999799999999988397999972799807998133-3898665598742217677750898
Q 002469 183 EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAML-TFEALSETSEFARKWVPFCKKYNIE 261 (918)
Q Consensus 183 ~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~-t~~~l~E~~~fA~~WvPfCkk~~ie 261 (918)
.++.+|.|.|.||+|| |+...+..|+.|+++.+||.....+.|.|||..+- |.+.+.
T Consensus 24 ~~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~------------------- 81 (472)
T 1xhb_A 24 YPDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE------------------- 81 (472)
T ss_dssp CCSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH-------------------
T ss_pred CCCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCHHHCEEEEEEECCCCCHHHHHHHH-------------------
T ss_conf 7867997599999678---878999999999986595767607999977999678999999-------------------
Q ss_pred CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 89910110001232348788224999999999999999999776663205884443446899899998788965357873
Q 002469 262 PRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFL 341 (918)
Q Consensus 262 praPe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l 341 (918)
++. +
T Consensus 82 -----------------------------------~~~-------~---------------------------------- 85 (472)
T 1xhb_A 82 -----------------------------------SYV-------K---------------------------------- 85 (472)
T ss_dssp -----------------------------------HHH-------H----------------------------------
T ss_pred -----------------------------------HHH-------H----------------------------------
T ss_conf -----------------------------------999-------8----------------------------------
Q ss_pred CCCCCCCCCCCCCC-CEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CC
Q ss_conf 37998787889878-2899960259998867611144899986013689979999449998894599999998442-89
Q 002469 342 GENGGLDAEGNELP-RLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DP 418 (918)
Q Consensus 342 ~~~g~~d~~~~~lP-~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~-Dp 418 (918)
..| ++.++..+++.| +++|+|.+++. +.|+||+.+|+|.. ..|++|.+.+-.+. +|
T Consensus 86 -----------~~~~~v~vi~~~~n~G-----~~~a~N~g~~~----A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~~ 143 (472)
T 1xhb_A 86 -----------KLKVPVHVIRMEQRSG-----LIRARLKGAAV----SRGQVITFLDAHCE-CTAGWLEPLLARIKHDR 143 (472)
T ss_dssp -----------SSSSCEEEEECSSCCC-----HHHHHHHHHHH----CCSSEEEEEESSEE-ECTTCHHHHHHHHHHCT
T ss_pred -----------HCCCCEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCEE-ECCCHHHHHHHHHHHCC
T ss_conf -----------7798579998898787-----69999999986----15876999889857-67347999999998399
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=1.00 E-value=1 Score=118.60 Aligned_cols=113 Identities=18% Similarity=0.125 Sum_probs=89.5
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99996216999468999999799999999988397999972799807998133389866559874221767775089889
Q 002469 184 PSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPR 263 (918)
Q Consensus 184 ~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepr 263 (918)
+..+|.|.|+||+|| |+...+..||.|+++..||.....+.|.|||..+-|.+.+
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---------------------- 116 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---------------------- 116 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG----------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHHCCHHHCEEEEEEECCCCCHHHHHH----------------------
T ss_conf 867997799999696---8689999999999850866335149999789995678999----------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 91011000123234878822499999999999999999977666320588444344689989999878896535787337
Q 002469 264 APEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGE 343 (918)
Q Consensus 264 aPe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~ 343 (918)
+.
T Consensus 117 -----------------------------------------~~------------------------------------- 118 (501)
T 2ffu_A 117 -----------------------------------------LG------------------------------------- 118 (501)
T ss_dssp -----------------------------------------GG-------------------------------------
T ss_pred -----------------------------------------HH-------------------------------------
T ss_conf -----------------------------------------84-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 998787889878289996025999886761114489998601368997999944999889459999999844289
Q 002469 344 NGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 344 ~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~Dp 418 (918)
..|++.|+..+++.| +++|+|.+++. +.|+||+.+|+|.. ..|++|.+.+..+.+.
T Consensus 119 ---------~~~~v~vi~~~~n~G-----~~~A~N~G~~~----A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 119 ---------KIEKVRVLRNDRREG-----LMRSRVRGADA----AQAKVLTFLDSHCE-CNEHWLEPLLERVAED 174 (501)
T ss_dssp ---------GBTTEEEEECSSCCH-----HHHHHHHHHHH----CCSSEEEECCSSEE-ECTTCHHHHHHHHHHC
T ss_pred ---------CCCCEEEEECCCCCC-----HHHHHHHHHHH----CCCCEEEEECCCCC-CCCCHHHHHHHHHHHC
T ss_conf ---------189879998998868-----89999998986----68988999779830-6720799999999839
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=115.22 Aligned_cols=125 Identities=22% Similarity=0.288 Sum_probs=92.9
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99962169994689999997999999999883979999727998079981333898665598742217677750898899
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 264 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepra 264 (918)
...|.|.|.||||| ++ ..+..++.|+++.+|| .+.++|.|||..+-|.+.+.+
T Consensus 372 ~~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~--------------------- 424 (625)
T 2z86_A 372 KRVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQE--------------------- 424 (625)
T ss_dssp CSSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHH---------------------
T ss_pred CCCCEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCHHHHHHHHH---------------------
T ss_conf 35971799995789---88-9999999999817699--828999989698649999999---------------------
Q ss_pred CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 10110001232348788224999999999999999999776663205884443446899899998788965357873379
Q 002469 265 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 344 (918)
Q Consensus 265 Pe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~~ 344 (918)
+. +
T Consensus 425 ---------------------------------~~-------~------------------------------------- 427 (625)
T 2z86_A 425 ---------------------------------HY-------A------------------------------------- 427 (625)
T ss_dssp ---------------------------------HH-------T-------------------------------------
T ss_pred ---------------------------------HH-------H-------------------------------------
T ss_conf ---------------------------------88-------5-------------------------------------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCCE
Q ss_conf 98787889878289996025999886761114489998601368997999944999889459999999844-28999950
Q 002469 345 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFM-MDPNLGKH 423 (918)
Q Consensus 345 g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff-~Dp~~g~~ 423 (918)
..|++.++. ++. ..+++|+|.+++. ++|+||+.+|+|.+ ..|++|.+.+..| .+| +
T Consensus 428 --------~~~~i~~~~-~~n-----~G~~~a~n~g~~~----a~g~~i~~ld~D~~-~~~~~l~~~~~~~~~~~----~ 484 (625)
T 2z86_A 428 --------NHPRVRFIS-QKN-----KGIGSASNTAVRL----CRGFYIGQLDSDDF-LEPDAVELCLDEFRKDL----S 484 (625)
T ss_dssp --------TCTTEEEEE-ECC-----CCHHHHHHHHHHH----CCSSEEEECCTTCE-ECTTHHHHHHHHHHHCT----T
T ss_pred --------HCCCEEEEE-CCC-----CCHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHHCC----C
T ss_conf --------499389991-798-----8989999999985----67787999889766-28359999999998479----8
Q ss_pred EEEEECCCCCCCC
Q ss_conf 7999037201499
Q 002469 424 VCYVQFPQRFDGI 436 (918)
Q Consensus 424 va~VQ~PQ~F~n~ 436 (918)
++.|.....+.+.
T Consensus 485 ~~~v~~~~~~~~~ 497 (625)
T 2z86_A 485 LACVYTTNRNIDR 497 (625)
T ss_dssp CSEEEEEEEEECT
T ss_pred EEEEEEEEEEECC
T ss_conf 1399820489879
No 7
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=1.00 E-value=1 Score=112.14 Aligned_cols=124 Identities=13% Similarity=0.250 Sum_probs=91.2
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 62169994689999997999999999883979999727998079981333898665598742217677750898899101
Q 002469 188 AAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEW 267 (918)
Q Consensus 188 p~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepraPe~ 267 (918)
|.|.|.||||| ++ ..+..|+.|+++++|| .+.+.|.|||..+-|.+.+.+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~------------------------ 50 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRP------------------------ 50 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGG------------------------
T ss_pred CEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHH------------------------
T ss_conf 95999997179---77-8999999999856278--649999978997108999999------------------------
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 10001232348788224999999999999999999776663205884443446899899998788965357873379987
Q 002469 268 YFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGGL 347 (918)
Q Consensus 268 yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~~g~~ 347 (918)
+.
T Consensus 51 -------------------------------------~~----------------------------------------- 52 (255)
T 1qg8_A 51 -------------------------------------FL----------------------------------------- 52 (255)
T ss_dssp -------------------------------------GG-----------------------------------------
T ss_pred -------------------------------------HH-----------------------------------------
T ss_conf -------------------------------------86-----------------------------------------
Q ss_pred CCCCCCCCCEEEEECCCCCCC----CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCCCC
Q ss_conf 878898782899960259998----867611144899986013689979999449998894599999998442-899995
Q 002469 348 DAEGNELPRLVYVSREKRPGF----QHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNLGK 422 (918)
Q Consensus 348 d~~~~~lP~lvYvsRekrPg~----~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~-Dp~~g~ 422 (918)
.-|++.|+..+. ++. ....+++|+|.+++. ++|+||+.+|+|.++ .|++|.+.+-.+. +|
T Consensus 53 -----~~~~i~~i~~~~-~~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~-~~~~l~~~~~~~~~~~---- 117 (255)
T 1qg8_A 53 -----NDNRVRFYQSDI-SGVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIY-MPDRLLKMVRELDTHP---- 117 (255)
T ss_dssp -----GSTTEEEEECCC-CSHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEE-CTTHHHHHHHHHHHCT----
T ss_pred -----HCCCEEEEECCC-CCCCCCCCCCCHHHHHHHHHHH----CCCCEEEEECCCCCC-CHHHHHHHHHHHHHCC----
T ss_conf -----069889996465-3332221466789999999987----588889996898762-8279999999998589----
Q ss_pred EEEEEECCCCCC
Q ss_conf 079990372014
Q 002469 423 HVCYVQFPQRFD 434 (918)
Q Consensus 423 ~va~VQ~PQ~F~ 434 (918)
++++|.....+.
T Consensus 118 ~~~~v~~~~~~~ 129 (255)
T 1qg8_A 118 EKAVIYSASKTY 129 (255)
T ss_dssp TCCEEEEEEEEE
T ss_pred CCEEEEECEEEE
T ss_conf 905998432899
No 8
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=1.00 E-value=1 Score=107.44 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=86.7
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 96216999468999999799999999988397999972799807998133389866559874221767775089889910
Q 002469 187 LAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPE 266 (918)
Q Consensus 187 lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepraPe 266 (918)
.|.|.|.||||| ++ ..+..++.|+++++|| .+.+.|.|||..+-|.+.+.+.
T Consensus 1 Mp~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~~---------------------- 52 (729)
T 3l7i_A 1 MNKLTIIVTYYN---AE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDEA---------------------- 52 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCCHHHHHHHH----------------------
T ss_conf 966999997678---78-9999999999827789--8699999789987579999999----------------------
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 11000123234878822499999999999999999977666320588444344689989999878896535787337998
Q 002469 267 WYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGENGG 346 (918)
Q Consensus 267 ~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~~g~ 346 (918)
.+ .++
T Consensus 53 -----------------------------~~----------------------------------~~~------------ 57 (729)
T 3l7i_A 53 -----------------------------IK----------------------------------DYD------------ 57 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------HH----------------------------------HCC------------
T ss_conf -----------------------------97----------------------------------479------------
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 78788987828999602599988676111448999860136899799994499988945999999984428999950799
Q 002469 347 LDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCY 426 (918)
Q Consensus 347 ~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~Dp~~g~~va~ 426 (918)
+++.|+..++.. ..++|.|.+++. ++|+||+.+|+|.+ ..|++|.+.+..+.++ ++.+
T Consensus 58 --------~~i~~i~~~~n~-----G~~~arN~gi~~----A~gdyI~flD~Dd~-~~p~~l~~l~~~l~~~----d~v~ 115 (729)
T 3l7i_A 58 --------KNIRFIDLDENS-----GHAHARNIALEE----VETPYFMFLDADDE-LASYAITFYLEKFNNT----DGLI 115 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------CCEEEEECCCCC-----CHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHCCC----CEEE
T ss_conf --------988999888877-----879999999986----66998999889877-7846999999982379----9899
Q ss_pred EEC
Q ss_conf 903
Q 002469 427 VQF 429 (918)
Q Consensus 427 VQ~ 429 (918)
...
T Consensus 116 ~~~ 118 (729)
T 3l7i_A 116 API 118 (729)
T ss_dssp ---
T ss_pred EEE
T ss_conf 866
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=1.00 E-value=1 Score=105.58 Aligned_cols=111 Identities=17% Similarity=0.210 Sum_probs=85.0
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99962169994689999997999999999883979999727998079981333898665598742217677750898899
Q 002469 185 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 264 (918)
Q Consensus 185 ~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~iepra 264 (918)
+..|.|.|.||||| ++ ..+..++.|+++.+|| .+.+.|.|||..+-|.+.+.+
T Consensus 2 ~~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~--------------------- 54 (240)
T 3bcv_A 2 SLIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDD--------------------- 54 (240)
T ss_dssp -CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHH---------------------
T ss_pred CCCCCEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCCHHHHHHH---------------------
T ss_conf 99984899996689---77-8999999999957689--869999989998678999999---------------------
Q ss_pred CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 10110001232348788224999999999999999999776663205884443446899899998788965357873379
Q 002469 265 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGEN 344 (918)
Q Consensus 265 Pe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l~~~ 344 (918)
+. +
T Consensus 55 ---------------------------------~~-------~------------------------------------- 57 (240)
T 3bcv_A 55 ---------------------------------YA-------A------------------------------------- 57 (240)
T ss_dssp ---------------------------------HH-------H-------------------------------------
T ss_pred ---------------------------------HH-------H-------------------------------------
T ss_conf ---------------------------------99-------6-------------------------------------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 98787889878289996025999886761114489998601368997999944999889459999999844289
Q 002469 345 GGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDP 418 (918)
Q Consensus 345 g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~Dp 418 (918)
..|++.++.. + ...+++|.|.+++. ++|+||+.+|+|.+ ..|++|.+.+..+.++
T Consensus 58 --------~~~~i~~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~-~~~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 58 --------QYPNIKVIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDY-VDSDMYMTMYNVAQKY 112 (240)
T ss_dssp --------HCSSEEEEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCC-CCTTHHHHHHHHHHHH
T ss_pred --------HCCCEEEEEC-C-----CCCHHHHHHHHHHH----CCCCEEEEECCCCC-CCHHHHHHHHHHHHHC
T ss_conf --------5897899988-9-----99949999999997----68999999879875-8889999999999846
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=1.00 E-value=1 Score=97.20 Aligned_cols=128 Identities=14% Similarity=0.121 Sum_probs=87.2
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999996216999468999999799999999988397999972-7998079981333898665598742217677750898
Q 002469 183 EPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKV-SCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIE 261 (918)
Q Consensus 183 ~~~~lp~VDvfV~t~dp~kEp~~v~~nTvls~la~dYP~~kl-~~yvsDDG~~~~t~~~l~E~~~fA~~WvPfCkk~~ie 261 (918)
++..-|.|.|.||||| ++ ..+.+++.|+++..|+.++. .++|.|||..+.+-
T Consensus 175 ~~~~~pkVSVVIptYN---~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~----------------------- 227 (657)
T 4fix_A 175 PAPGTANIAVGIPTFN---RP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRD----------------------- 227 (657)
T ss_dssp CCCSCCCEEEECCBSS---CH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGG-----------------------
T ss_pred CCCCCCEEEEEEEECC---CH-HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC-----------------------
T ss_conf 8889986999998559---99-99999999997174446887789999895998635-----------------------
Q ss_pred CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 89910110001232348788224999999999999999999776663205884443446899899998788965357873
Q 002469 262 PRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFL 341 (918)
Q Consensus 262 praPe~yF~~~~d~~~~~~~~~f~~err~~kr~yee~k~ri~~l~~~~~~~p~~~w~m~dgt~w~~~~~~dhp~~iqv~l 341 (918)
.+.+ .+... +.
T Consensus 228 -------------------~~~~-----------~e~~~-------~~-------------------------------- 238 (657)
T 4fix_A 228 -------------------HPDF-----------PAAAA-------RL-------------------------------- 238 (657)
T ss_dssp -------------------STTH-----------HHHHH-------HH--------------------------------
T ss_pred -------------------HHHH-----------HHHHH-------HC--------------------------------
T ss_conf -------------------5799-----------99998-------51--------------------------------
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCC
Q ss_conf 379987878898782899960259998867611144899986013689979999449998894599999998442-8999
Q 002469 342 GENGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMM-DPNL 420 (918)
Q Consensus 342 ~~~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGalNallrvSav~tn~~~il~lDaD~yi~~~~~Lr~am~ff~-Dp~~ 420 (918)
-|++.|+..+ .. ..|+|.|.+++...-.++++||+.+|.|.. ..|++|.+.+.++. +|
T Consensus 239 ------------~~~I~vI~~~-N~-----G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~-~~pd~L~~ll~~l~~~~-- 297 (657)
T 4fix_A 239 ------------GSRLSIHDQP-NL-----GGSGGYSRVMYEALKNTDCQQILFMDDDIR-LEPDSILRVLAMHRFAK-- 297 (657)
T ss_dssp ------------GGGEEEEECC-CC-----HHHHHHHHHHHHHHHHCCCSEEEEECSSEE-ECTHHHHHHHHHHHHBS--
T ss_pred ------------CCCEEEEECC-CC-----CHHHHHHHHHHHHHHCCCCCEEEEECCCCC-CCHHHHHHHHHHHHHCC--
T ss_conf ------------9978999889-88-----779999999999873689988999899885-18609999999998589--
Q ss_pred CCEEEEEEC
Q ss_conf 950799903
Q 002469 421 GKHVCYVQF 429 (918)
Q Consensus 421 g~~va~VQ~ 429 (918)
+++.|+.
T Consensus 298 --~~~~vg~ 304 (657)
T 4fix_A 298 --APMLVGG 304 (657)
T ss_dssp --SCCEEEE
T ss_pred --CCEEEEE
T ss_conf --9289986
Done!