Query         002476
Match_columns 917
No_of_seqs    568 out of 3774
Neff          7.0 
Searched_HMMs 13730
Date          Tue Mar 26 16:43:40 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002476.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1196-1200//hhsearch_scop/002476hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1uoha_ d.211.1.1 (A:) 26S pro  99.6 1.4E-13   1E-17  133.9  18.5  131  535-673    69-200 (223)
  2 d1dcqa1 d.211.1.1 (A:369-522)   99.5 2.2E-13 1.6E-17  132.1  15.8  124  538-668     8-140 (154)
  3 d1s70b_ d.211.1.1 (B:) Myosin   99.5 4.8E-13 3.5E-17  129.0  16.6   98  560-667   189-286 (291)
  4 d1uoha_ d.211.1.1 (A:) 26S pro  99.5   3E-13 2.2E-17  130.9  15.5  122  533-663   100-222 (223)
  5 d1n11a_ d.211.1.1 (A:) Ankyrin  99.5 4.2E-13 3.1E-17  129.6  16.1  124  533-664   261-385 (408)
  6 d1n11a_ d.211.1.1 (A:) Ankyrin  99.5 7.1E-13 5.2E-17  127.5  16.1  139  533-679   228-367 (408)
  7 d1ycsb1 d.211.1.1 (B:327-456)   99.5 9.5E-14 6.9E-18  135.4  11.4  122  538-666     3-127 (130)
  8 d1bi7b_ d.211.1.1 (B:) Cell cy  99.5 1.2E-13 8.8E-18  134.4  11.5  121  535-664     2-124 (125)
  9 d1oy3d_ d.211.1.1 (D:) Transcr  99.5 1.7E-13 1.2E-17  133.1  12.0  103  560-668   148-251 (255)
 10 d1awcb_ d.211.1.1 (B:) GA bind  99.5 7.8E-13 5.7E-17  127.1  14.2  121  533-661    31-152 (153)
 11 d1oy3d_ d.211.1.1 (D:) Transcr  99.5 1.1E-12 8.3E-17  125.7  14.4  137  534-677    43-227 (255)
 12 d1ot8a_ d.211.1.1 (A:) Neuroge  99.5   4E-12 2.9E-16  120.8  16.5  119  535-661    89-208 (209)
 13 d1wdya_ d.211.1.1 (A:) RNase L  99.5 3.3E-12 2.4E-16  121.6  16.1  132  534-673   146-284 (285)
 14 d2fo1e1 d.211.1.1 (E:1021-1297  99.4 5.3E-12 3.8E-16  119.7  16.4   94  564-663   181-275 (277)
 15 d2fo1e1 d.211.1.1 (E:1021-1297  99.4 1.1E-12 7.8E-17  125.9  10.9   35  638-672   217-251 (277)
 16 d1bd8a_ d.211.1.1 (A:) Cell cy  99.4 1.1E-11 7.8E-16  116.9  16.0  122  533-664    33-155 (156)
 17 d1ihba_ d.211.1.1 (A:) p18ink4  99.4 5.3E-12 3.9E-16  119.7  14.4  123  534-665    32-156 (156)
 18 d1myoa_ d.211.1.1 (A:) Myotrop  99.4 9.7E-14 7.1E-18  135.3   5.0  106  538-651     4-110 (118)
 19 d1ixva_ d.211.1.1 (A:) 26S pro  99.4 1.2E-11 8.7E-16  116.5  15.0  124  534-668   103-229 (229)
 20 d1ixva_ d.211.1.1 (A:) 26S pro  99.4 2.7E-12   2E-16  122.3  11.4  136  534-677    68-208 (229)
 21 d1iknd_ d.211.1.1 (D:) I-kappa  99.4 3.5E-12 2.6E-16  121.3  11.5  126  534-667    70-203 (221)
 22 d1k1aa_ d.211.1.1 (A:) bcl-3 {  99.4 7.5E-11 5.5E-15  109.4  17.2  117  535-659   109-227 (228)
 23 d1sw6a_ d.211.1.1 (A:) Swi6 an  99.3 1.1E-10 7.9E-15  107.9  17.5  140  534-678   105-295 (301)
 24 d1iknd_ d.211.1.1 (D:) I-kappa  99.3 1.1E-11 7.8E-16  117.0  11.6  140  533-679    36-182 (221)
 25 d1ycsb1 d.211.1.1 (B:327-456)   99.3   1E-11 7.5E-16  117.1  11.1   96  571-672     2-97  (130)
 26 d1bd8a_ d.211.1.1 (A:) Cell cy  99.3 4.3E-11 3.1E-15  111.5  13.3  130  537-676     3-134 (156)
 27 d2ajaa1 a.118.24.1 (A:3-348) H  99.3 8.8E-14 6.4E-18  135.7  -0.6  133  535-670    89-225 (346)
 28 d1myoa_ d.211.1.1 (A:) Myotrop  99.3 8.8E-12 6.4E-16  117.7   9.0  103  571-679     3-105 (118)
 29 d1s70b_ d.211.1.1 (B:) Myosin   99.3 3.9E-11 2.8E-15  112.0  11.9   76  597-678   193-268 (291)
 30 d1ot8a_ d.211.1.1 (A:) Neuroge  99.2 1.2E-09 8.5E-14   98.7  16.0  132  536-675    23-189 (209)
 31 d2cxka1 b.1.18.1 (A:872-953) C  99.2 3.4E-11 2.5E-15  112.4   8.0   81  367-453     2-82  (82)
 32 d2ajaa1 a.118.24.1 (A:3-348) H  99.1 3.5E-12 2.5E-16  121.3   1.1  103  563-669    83-188 (346)
 33 d1k1aa_ d.211.1.1 (A:) bcl-3 {  99.1 3.1E-10 2.3E-14  103.8  10.2  138  535-678     2-213 (228)
 34 d1dcqa1 d.211.1.1 (A:369-522)   99.1 5.8E-10 4.2E-14  101.4  11.1   96  534-630    43-141 (154)
 35 d1sw6a_ d.211.1.1 (A:) Swi6 an  99.1 2.8E-10   2E-14  104.3   9.2   84  560-652    96-187 (301)
 36 d1bi7b_ d.211.1.1 (B:) Cell cy  99.1 2.4E-10 1.8E-14  104.8   8.5  102  569-677     2-104 (125)
 37 d1wdya_ d.211.1.1 (A:) RNase L  99.0 1.1E-09 8.1E-14   98.9   9.9   96  536-631   182-281 (285)
 38 d1awcb_ d.211.1.1 (B:) GA bind  99.0 4.6E-09 3.4E-13   93.3  12.6  134  536-678     2-136 (153)
 39 d1ihba_ d.211.1.1 (A:) p18ink4  98.9 4.5E-09 3.3E-13   93.4   9.8  125  538-671     3-129 (156)
 40 d1qhoa1 b.1.18.2 (A:496-576) F  97.7 6.1E-05 4.5E-09   56.3   7.7   78  364-451     3-80  (81)
 41 d1uadc_ b.1.18.18 (C:) Exocyst  97.6 0.00011 8.2E-09   54.0   7.9   87  363-455     3-92  (92)
 42 d1p7hl1 b.1.18.1 (L:576-678) T  97.6 7.6E-05 5.5E-09   55.5   7.0   84  363-454     1-102 (103)
 43 d3bmva1 b.1.18.2 (A:496-578) C  97.4 0.00064 4.7E-08   47.2   8.7   80  364-451     3-82  (83)
 44 d1cxla1 b.1.18.2 (A:497-583) C  97.3 0.00054 3.9E-08   47.9   8.0   82  364-453     2-86  (87)
 45 d1cyga1 b.1.18.2 (A:492-574) C  97.3 0.00081 5.9E-08   46.3   8.8   80  364-451     3-82  (83)
 46 d3brda1 b.1.18.1 (A:542-660) D  97.0  0.0009 6.6E-08   45.9   6.7   82  363-453    20-118 (119)
 47 d1kk8a2 c.37.1.9 (A:1-28,A:77-  97.0  0.0017 1.2E-07   43.5   7.5   46  766-811   730-778 (789)
 48 d2mysa2 c.37.1.9 (A:4-33,A:80-  96.9  0.0014   1E-07   44.1   6.9   45  767-811   735-782 (794)
 49 d2mysa2 c.37.1.9 (A:4-33,A:80-  96.5  0.0089 6.5E-07   36.9   8.5   46  787-833   732-780 (794)
 50 d1kk8a2 c.37.1.9 (A:1-28,A:77-  96.5    0.01 7.6E-07   36.3   8.7   47  787-834   728-777 (789)
 51 d1imhc1 b.1.18.1 (C:368-468) T  94.0    0.13 9.1E-06   26.6   7.4   84  364-454     1-100 (101)
 52 d1gjia1 b.1.18.1 (A:182-281) p  92.6    0.17 1.2E-05   25.5   6.2   83  365-454     4-99  (100)
 53 d1my7a_ b.1.18.1 (A:) p65 subu  85.3    0.71 5.2E-05   19.9   7.1   84  365-454     4-100 (107)
 54 d1u36a_ b.1.18.1 (A:) p50 subu  84.9    0.74 5.4E-05   19.7   7.2   83  365-454     2-103 (104)
 55 d1a3qa1 b.1.18.1 (A:227-327) p  79.9     1.1 7.8E-05   18.3   7.7   83  365-454     2-101 (101)
 56 d1w7ja2 c.37.1.9 (A:63-792) My  62.8     2.3 0.00017   15.2   5.5   28  868-895   702-729 (730)
 57 d1w7ja2 c.37.1.9 (A:63-792) My  33.9     5.9 0.00043   11.6   5.2   31  783-813   699-729 (730)

No 1  
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60  E-value=1.4e-13  Score=133.91  Aligned_cols=131  Identities=20%  Similarity=0.204  Sum_probs=73.9

Q ss_pred             CCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             6663879999819928999999973-999874467998067899970999999999986999753379999399999981
Q 002476          535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY  613 (917)
Q Consensus       535 ~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~  613 (917)
                      ...++++.++..++..  +++.|++ |++++..|..|.||||+|+..|+.+++++|+.+|++++.+|..|.||||+|+..
T Consensus        69 ~~~~~~~~~~~~~~~~--i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~  146 (223)
T d1uoha_          69 AGWSPLHIAASAGRDE--IVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK  146 (223)
T ss_dssp             TCCCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCC--HHHHHHCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
T ss_conf             2223322222211110--16777406864675489999662698876989999999987899987689999501023213


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             999999999865999998889998899999699999981969999999870000032334
Q 002476          614 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM  673 (917)
Q Consensus       614 G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~  673 (917)
                      |+..++++|+..|++++.      +|..|.|||++|+..|+.+++++|+++|++.+..+.
T Consensus       147 ~~~~~~~~L~~~~~~i~~------~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~  200 (223)
T d1uoha_         147 GNLKMIHILLYYKASTNI------QDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENK  200 (223)
T ss_dssp             TCHHHHHHHHHTTCCSCC------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred             CCCCHHHHHCCCCCEEEE------CCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCC
T ss_conf             874202332022320120------368887411210025849999999987799988799


No 2  
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55  E-value=2.2e-13  Score=132.10  Aligned_cols=124  Identities=20%  Similarity=0.200  Sum_probs=107.0

Q ss_pred             CHHHHHHHCCCCHHHHHHHHHCCCCCCCC------CCCCCHHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf             38799998199289999999739998744------67998067899970---9999999999869997533799993999
Q 002476          538 DSFFELTLKSKLKEWLLERVVEGSKTTEY------DVHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTALH  608 (917)
Q Consensus       538 ~~L~~a~~~~~l~~~Lv~~Ll~ga~~n~~------d~~G~T~LHlAA~~---G~~~~v~~LL~~Ga~in~~D~~G~TpLH  608 (917)
                      ..|+.++..+++.. +...+..|++++..      +..|.||||+|+..   |..+++++|+.+|+++|.+|..|+||||
T Consensus         8 ~~L~~Av~~~dl~~-l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh   86 (154)
T d1dcqa1           8 HSLCEAVKTRDIFG-LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH   86 (154)
T ss_dssp             HHHHHHHHTTCHHH-HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred             HHHHHHHHHCCHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCC
T ss_conf             99999999588999-99999869986777775457899982699999832899899999999749973331312101000


Q ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC
Q ss_conf             999819999999998659999988899988999996999999819699999998700000
Q 002476          609 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA  668 (917)
Q Consensus       609 ~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~  668 (917)
                      +|+..|+.+++++|+++|++++.      +|..|.||+|+|+..|+.+++++|++.++..
T Consensus        87 ~A~~~~~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1          87 YCCLTDNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC
T ss_conf             11112333322122135755024------4789999999999939999999999938897


No 3  
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.53  E-value=4.8e-13  Score=129.02  Aligned_cols=98  Identities=26%  Similarity=0.346  Sum_probs=69.6

Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99987446799806789997099999999998699975337999939999998199999999986599999888999889
Q 002476          560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN  639 (917)
Q Consensus       560 ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d  639 (917)
                      .......+..|.|+||+|+..|+..+++.|+..|+++|.+|.+|+||||+|+..|+.++|++|+++||+++.      +|
T Consensus       189 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~------~d  262 (291)
T d1s70b_         189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA------VN  262 (291)
T ss_dssp             CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CC
T ss_pred             CCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC------CC
T ss_conf             211002467898730488876995441013441011242125798899999985989999999987999988------68


Q ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHHCCC
Q ss_conf             9999699999981969999999870000
Q 002476          640 PGGLNAADIASKKGFDGLAAFLSEQALV  667 (917)
Q Consensus       640 ~~G~TpL~lA~~~G~~~iv~~Lle~ga~  667 (917)
                      ..|.||||+|+.    +++++|.+-...
T Consensus       263 ~~G~TaL~~A~e----~~~~~L~~~~~~  286 (291)
T d1s70b_         263 KVGQTAFDVADE----DILGYLEELQKK  286 (291)
T ss_dssp             TTSCCTTTSCCS----GGGHHHHHHHHH
T ss_pred             CCCCCHHHHHHH----HHHHHHHHHHHH
T ss_conf             999999999999----899999998635


No 4  
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53  E-value=3e-13  Score=130.94  Aligned_cols=122  Identities=20%  Similarity=0.179  Sum_probs=113.8

Q ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             876663879999819928999999973-9998744679980678999709999999999869997533799993999999
Q 002476          533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       533 ~~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa  611 (917)
                      ...+.+||+.++..++..  +++.|++ |++++..|..|.|+||+|+..++..++++|+..|+++|.+|.+|+||||+|+
T Consensus       100 d~~g~tpL~~A~~~~~~e--~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa  177 (223)
T d1uoha_         100 NQNGCTPLHYAASKNRHE--IAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLAC  177 (223)
T ss_dssp             CTTCCCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHH
T ss_pred             CCCCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCEECCCC
T ss_conf             899996626988769899--999999878999876899995010232138742023320223201203688874112100


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             8199999999986599999888999889999969999998196999999987
Q 002476          612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE  663 (917)
Q Consensus       612 ~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle  663 (917)
                      ..|+.++|++|++.||+++.      +|..|.||+|+|. .|+..++++|++
T Consensus       178 ~~g~~~~v~~LL~~Gad~~~------~d~~g~tpl~~A~-~~~~~i~~~Ll~  222 (223)
T d1uoha_         178 DEERVEEAKLLVSQGASIYI------ENKEEKTPLQVAK-GGLGLILKRMVE  222 (223)
T ss_dssp             HTTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHCC-TTHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHH-CCCHHHHHCCCC
T ss_conf             25849999999987799988------7999999999987-789999830047


No 5  
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53  E-value=4.2e-13  Score=129.58  Aligned_cols=124  Identities=19%  Similarity=0.278  Sum_probs=114.5

Q ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             876663879999819928999999973-9998744679980678999709999999999869997533799993999999
Q 002476          533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       533 ~~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa  611 (917)
                      ...+.++++.++..++..  +++.|++ |++++..+..+.|+||.++..+..++++.++..|+++|.+|.+|.||||+|+
T Consensus       261 ~~~g~~~l~~a~~~~~~~--i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~  338 (408)
T d1n11a_         261 NKSGLTPLHLVAQEGHVP--VADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAA  338 (408)
T ss_dssp             CTTCCCHHHHHHHHTCHH--HHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf             478997334543028489--999999779965621023445302210058621355301333322346899999999999


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf             81999999999865999998889998899999699999981969999999870
Q 002476          612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ  664 (917)
Q Consensus       612 ~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~  664 (917)
                      .+|+.++|++|+++||++++      +|..|.||||+|+..|+.+++++|..-
T Consensus       339 ~~g~~~iv~~Ll~~GAd~n~------~d~~G~t~L~~A~~~~~~~iv~~L~~~  385 (408)
T d1n11a_         339 QQGHTDIVTLLLKNGASPNE------VSSDGTTPLAIAKRLGYISVTDVLKVV  385 (408)
T ss_dssp             HTTCHHHHHHHHHTTCCSCC------CCSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             86889999999987889988------799998999999983999999999998


No 6  
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=7.1e-13  Score=127.54  Aligned_cols=139  Identities=17%  Similarity=0.188  Sum_probs=125.0

Q ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             876663879999819928999999973-9998744679980678999709999999999869997533799993999999
Q 002476          533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       533 ~~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa  611 (917)
                      ..++.++++.++..+...  ++..+.. +...+..+..|.|+||.|+..++..++++|++.|++++..+..+.||||.|+
T Consensus       228 ~~~~~t~l~~a~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~  305 (408)
T d1n11a_         228 SVQGVTPLHLAAQEGHAE--MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVAS  305 (408)
T ss_dssp             CTTCCCHHHHHHHTTCHH--HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHCCHH--HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHC
T ss_conf             778999999999808676--754420022111112478997334543028489999999779965621023445302210


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             81999999999865999998889998899999699999981969999999870000032334434322
Q 002476          612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI  679 (917)
Q Consensus       612 ~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~~i  679 (917)
                      ..++.++++.++..|++++.      +|..|.||||+|+..|+.+++++|+++|++.+..+.....++
T Consensus       306 ~~~~~~~~~~ll~~g~~in~------~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L  367 (408)
T d1n11a_         306 HYGNIKLVKFLLQHQADVNA------KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL  367 (408)
T ss_dssp             HSSCSHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHH
T ss_pred             CCCCCEEEEEECCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf             05862135530133332234------689999999999986889999999987889988799998999


No 7  
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51  E-value=9.5e-14  Score=135.36  Aligned_cols=122  Identities=21%  Similarity=0.286  Sum_probs=110.3

Q ss_pred             CHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             3879999819928999999973-999874467998067899970999999999986999753379999399999981999
Q 002476          538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE  616 (917)
Q Consensus       538 ~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~  616 (917)
                      +.|+.++..|++.  +++.|++ |++++.+|..|.||||+|+..|+..++++|+..|+++|.+|.+|+||||+|+.+|+.
T Consensus         3 ~lL~~A~~~G~~~--~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~   80 (130)
T d1ycsb1           3 ALLLDSSLEGEFD--LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV   80 (130)
T ss_dssp             HHHHHHHHHTCHH--HHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred             HHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             9999999939999--99999986997561002111111222222222222222222222222123676422232102688


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH--HHCCCHHHHHHHHHHCC
Q ss_conf             999999865999998889998899999699999--98196999999987000
Q 002476          617 KMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA--SKKGFDGLAAFLSEQAL  666 (917)
Q Consensus       617 ~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA--~~~G~~~iv~~Lle~ga  666 (917)
                      +++++|+++||+++..+     +..|.||++++  ...|+.+++++|+..+.
T Consensus        81 ~~v~~Ll~~ga~v~~~~-----~~~~~~~~~~~~a~~~g~~eiv~~L~~~~~  127 (130)
T d1ycsb1          81 QVCKFLVESGAAVFAMT-----YSDMQTAADKCEEMEEGYTQCSQFLYGVQE  127 (130)
T ss_dssp             HHHHHHHHTTCCTTCCC-----SSSCCCHHHHCCSSSTTCCCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCC-----CCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             99999998699866466-----899988999999998682999999986787


No 8  
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50  E-value=1.2e-13  Score=134.43  Aligned_cols=121  Identities=21%  Similarity=0.272  Sum_probs=111.6

Q ss_pred             CCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHH
Q ss_conf             6663879999819928999999973-999874467998067899970999999999986999753379999-39999998
Q 002476          535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWAAY  612 (917)
Q Consensus       535 ~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~-TpLH~Aa~  612 (917)
                      ...+.|+.++..|++.  +++.|++ |++++..|..|.|+||+| ..|+.+++++|+.+|+++|.+|..|+ ||||+|+.
T Consensus         2 p~~~~L~~Aa~~G~~~--~v~~Ll~~gad~n~~~~~g~t~l~~a-~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~   78 (125)
T d1bi7b_           2 PSADWLATAAARGRVE--EVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAR   78 (125)
T ss_dssp             CSTTHHHHHHHHTCHH--HHHHHHTTTCCTTCCCSSSCCTTTSS-CTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred             CCHHHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8705999999877999--99999985974133222122222222-22222222212222222222222222222222223


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf             1999999999865999998889998899999699999981969999999870
Q 002476          613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ  664 (917)
Q Consensus       613 ~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~  664 (917)
                      .|+.+++++|++.|++++.      +|..|.||+++|+.+|+.+++++|+..
T Consensus        79 ~g~~~~v~~Ll~~ga~~~~------~d~~G~T~l~~A~~~g~~~~v~~Llsa  124 (125)
T d1bi7b_          79 EGFLDTLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAA  124 (125)
T ss_dssp             HTCHHHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred             CCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHC
T ss_conf             2222222222122222332------457898999999986879999999956


No 9  
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50  E-value=1.7e-13  Score=133.14  Aligned_cols=103  Identities=21%  Similarity=0.188  Sum_probs=96.1

Q ss_pred             CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9998744679980678999709999999999869997533-799993999999819999999998659999988899988
Q 002476          560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQ  638 (917)
Q Consensus       560 ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~-D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~  638 (917)
                      +.+++..|..|.||||+|+..|+.+++++|+..+++.+.. +..|+||||+|+..|+.+++++|+++|++++.      +
T Consensus       148 ~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~------~  221 (255)
T d1oy3d_         148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA------R  221 (255)
T ss_dssp             GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------C
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC------C
T ss_conf             8663310046763223332232222221000013331221334443322001233399999999987899888------7


Q ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHHCCCC
Q ss_conf             999996999999819699999998700000
Q 002476          639 NPGGLNAADIASKKGFDGLAAFLSEQALVA  668 (917)
Q Consensus       639 d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~  668 (917)
                      |..|.||||+|+..++.+++++|+++||+.
T Consensus       222 d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~~  251 (255)
T d1oy3d_         222 MYGGRTPLGSALLRPNPILARLLRAHGAPE  251 (255)
T ss_dssp             CTTSCCHHHHHHTSSCHHHHHHHHHTTCCC
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf             999999999999878899999999769899


No 10 
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48  E-value=7.8e-13  Score=127.14  Aligned_cols=121  Identities=21%  Similarity=0.205  Sum_probs=104.9

Q ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             876663879999819928999999973-9998744679980678999709999999999869997533799993999999
Q 002476          533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       533 ~~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa  611 (917)
                      ...+.++|+.++..++..  ++..+.. ....+..+..+.+++|+++...+...++.++..|++++.+|.+|+||||+|+
T Consensus        31 ~~~g~t~L~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~  108 (153)
T d1awcb_          31 DWLGTSPLHLAAQYGHFS--TTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWAT  108 (153)
T ss_dssp             CTTCCCHHHHHHHHTCHH--HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             447875333432322222--222222222222212222333232222331101221222468761232246734777664


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             81999999999865999998889998899999699999981969999999
Q 002476          612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFL  661 (917)
Q Consensus       612 ~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~L  661 (917)
                      ..|+.+++++|++.|++++.      +|..|.||+++|+.+|+.+++++|
T Consensus       109 ~~g~~~iv~~ll~~gad~~~------~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         109 EHNHQEVVELLIKYGADVHT------QSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HCCHHHEEEECCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             30222412311434467726------689899999999985999999867


No 11 
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47  E-value=1.1e-12  Score=125.69  Aligned_cols=137  Identities=16%  Similarity=0.109  Sum_probs=109.5

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH---------------------
Q ss_conf             76663879999819928999999973-99987446799806789997099999999998---------------------
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW---------------------  591 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~---------------------  591 (917)
                      ..+.|||+.++..++..  +++.|++ |++++..|..|.||||+|+..|+.++++.|+.                     
T Consensus        43 ~~g~TpL~~A~~~g~~~--iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~  120 (255)
T d1oy3d_          43 DLGQTALHLAAILGEAS--TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT  120 (255)
T ss_dssp             TTSCCHHHHHHHHTCHH--HHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------
T ss_pred             CCCCCCCCHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHC
T ss_conf             99997240687624543--2322223333322322222102333322682589999986142010122025666776522


Q ss_pred             --------------------------CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             --------------------------699975337999939999998199999999986599999888999889999969
Q 002476          592 --------------------------SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA  645 (917)
Q Consensus       592 --------------------------~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~Tp  645 (917)
                                                .+.+++.+|..|+||||+|+..|+.+++++|+..|++.+..     .+..|.||
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~g~Tp  195 (255)
T d1oy3d_         121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP-----EPTCGRTP  195 (255)
T ss_dssp             -----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-----CTTTCCCH
T ss_pred             CCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC-----CCCCCCCC
T ss_conf             4306779999862030678998765328663310046763223332232222221000013331221-----33444332


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99999819699999998700000323344343
Q 002476          646 ADIASKKGFDGLAAFLSEQALVAQFNDMTLAG  677 (917)
Q Consensus       646 L~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~  677 (917)
                      ||+|+..|+.+++++|+++|++.+..+.....
T Consensus       196 L~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t  227 (255)
T d1oy3d_         196 LHLAVEAQAASVLELLLKAGADPTARMYGGRT  227 (255)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             20012333999999999878998887999999


No 12 
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.46  E-value=4e-12  Score=120.77  Aligned_cols=119  Identities=18%  Similarity=0.162  Sum_probs=104.7

Q ss_pred             CCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             6663879999819928999999973-999874467998067899970999999999986999753379999399999981
Q 002476          535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY  613 (917)
Q Consensus       535 ~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~  613 (917)
                      .+.+..+.+.......  +...|.. +++++..+..|.|+||+++..+...++..++..++++|.+|..|+||||+|+..
T Consensus        89 ~~~~~~~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~  166 (209)
T d1ot8a_          89 DGTTPLILAARLAIEG--MVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAARE  166 (209)
T ss_dssp             TCCCHHHHHHHTTCTT--HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCHH--HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCC
T ss_conf             2333222222221012--35555310146555577999823000036863145320122223454434445521121032


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             999999999865999998889998899999699999981969999999
Q 002476          614 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFL  661 (917)
Q Consensus       614 G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~L  661 (917)
                      |+.+++++|+++||+++.      +|..|.||+|+|+.+|+.+++++|
T Consensus       167 g~~~~v~~Ll~~gad~n~------~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         167 GSYEASKALLDNFANREI------TDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             TCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CHHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             499999999987999988------689999999999986879899643


No 13 
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=3.3e-12  Score=121.57  Aligned_cols=132  Identities=17%  Similarity=0.206  Sum_probs=116.3

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHC----CCHHHHHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             76663879999819928999999973--999874467998067899970----999999999986999753379999399
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAML----GYTWAILLFSWSGLSLDFRDKYGWTAL  607 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~--ga~~n~~d~~G~T~LHlAA~~----G~~~~v~~LL~~Ga~in~~D~~G~TpL  607 (917)
                      ..+.++|+.++..++..  +++.|+.  |++++..+..|.++++.+...    +...+++.|+++|+++|.+|..|.|||
T Consensus       146 ~~g~t~L~~A~~~~~~~--~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L  223 (285)
T d1wdya_         146 KGGATALMDAAEKGHVE--VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL  223 (285)
T ss_dssp             CCCCCHHHHHHHHTCHH--HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred             CCCCHHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             46856999999868999--9999984569894554678983322332234301799999999977999886689999824


Q ss_pred             HHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             99998199999999986-5999998889998899999699999981969999999870000032334
Q 002476          608 HWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM  673 (917)
Q Consensus       608 H~Aa~~G~~~iv~~LL~-~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~  673 (917)
                      |+|+..|+.+++++||. .|++++.      +|..|.||||+|+..|+.+++++|+++||+.+..|+
T Consensus       224 ~~a~~~~~~~~v~~lL~~~g~din~------~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         224 ILAVEKKHLGLVQRLLEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHHHTTCHHHHHHHHHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CHHHHCCCHHHHHHHHHCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
T ss_conf             1122138699999999808999868------799998999999985979999999987989986017


No 14 
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.45  E-value=5.3e-12  Score=119.73  Aligned_cols=94  Identities=19%  Similarity=0.234  Sum_probs=86.5

Q ss_pred             CCCCCCCCHHHHHHHHCCCHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             7446799806789997099999999-998699975337999939999998199999999986599999888999889999
Q 002476          564 TEYDVHGQGVIHLCAMLGYTWAILL-FSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG  642 (917)
Q Consensus       564 n~~d~~G~T~LHlAA~~G~~~~v~~-LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G  642 (917)
                      +..+..|.|+||+++..++..++.+ +...+.+++.+|..|+||||+|+..|+.+++++|++.||+++.      +|..|
T Consensus       181 ~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~------~d~~G  254 (277)
T d2fo1e1         181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA------VDATD  254 (277)
T ss_dssp             SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC------CCSSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCC
T ss_conf             544668987000012233322222322234543334689999899999985989999999987699988------69999


Q ss_pred             CCHHHHHHHCCCHHHHHHHHH
Q ss_conf             969999998196999999987
Q 002476          643 LNAADIASKKGFDGLAAFLSE  663 (917)
Q Consensus       643 ~TpL~lA~~~G~~~iv~~Lle  663 (917)
                      .||||+|+..|+.+++++|++
T Consensus       255 ~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         255 HTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHT
T ss_pred             CCHHHHHHHCCCHHHHHHHHH
T ss_conf             999999998598999999997


No 15 
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.41  E-value=1.1e-12  Score=125.93  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=18.7

Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             89999969999998196999999987000003233
Q 002476          638 QNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND  672 (917)
Q Consensus       638 ~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~  672 (917)
                      +|..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus       217 ~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d  251 (277)
T d2fo1e1         217 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD  251 (277)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf             68999989999998598999999998769998869


No 16 
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41  E-value=1.1e-11  Score=116.95  Aligned_cols=122  Identities=18%  Similarity=0.238  Sum_probs=107.5

Q ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             876663879999819928999999973-9998744679980678999709999999999869997533799993999999
Q 002476          533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       533 ~~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa  611 (917)
                      ...+.+||+.++ .++..  ++..|+. +.+++..+..|.+++++++..++..+++.++..|+++|.+|..|+||||+|+
T Consensus        33 d~~g~t~L~~A~-~~~~~--~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~  109 (156)
T d1bd8a_          33 NRFGKTALQVMM-FGSTA--IALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAV  109 (156)
T ss_dssp             CTTSCCHHHHSC-TTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCC-CCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
T ss_conf             899984133432-22222--222222222222222222222222222222222222222221221123677872221222


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf             81999999999865999998889998899999699999981969999999870
Q 002476          612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ  664 (917)
Q Consensus       612 ~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~  664 (917)
                      ..|+.+++++|+ .|++++.      +|..|.||+|+|+..|+.+++++|+++
T Consensus       110 ~~~~~~i~~~L~-~~~~~~~------~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         110 QEGHTAVVSFLA-AESDLHR------RDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHTCHHHHHHHH-TTSCTTC------CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             CCCCCCCCCCCC-CCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             233222211112-2256646------689999999999985989999999966


No 17 
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41  E-value=5.3e-12  Score=119.69  Aligned_cols=123  Identities=20%  Similarity=0.211  Sum_probs=86.0

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             76663879999819928999999973-99987446799806789997099999999998699975337999939999998
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY  612 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~  612 (917)
                      .++.|||+.+ ..++.+  +++.|++ |++++..+..|.++++.++..+....+..|+..+.+++..|..|.+|||+|+.
T Consensus        32 ~~g~TpL~~A-~~~~~e--i~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~  108 (156)
T d1ihba_          32 GFGRTALQVM-KLGNPE--IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAK  108 (156)
T ss_dssp             TTSCCHHHHC-CSSCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCCCCCC-CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             7445321222-222222--2222222222221212357532223322222222222211222222356443211223333


Q ss_pred             CCCHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHC
Q ss_conf             199999999986599-99988899988999996999999819699999998700
Q 002476          613 YGREKMVVDLLSAGA-KPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA  665 (917)
Q Consensus       613 ~G~~~iv~~LL~~GA-~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~g  665 (917)
                      .|+.++++.|+..|+ +.+.      +|..|.||+|+|+..|+.+++++|+++|
T Consensus       109 ~~~~~~~~~Ll~~~~~~~~~------~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         109 EGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             TTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCC
T ss_conf             22122222222122011224------5899989999999839899999999667


No 18 
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.40  E-value=9.7e-14  Score=135.29  Aligned_cols=106  Identities=25%  Similarity=0.279  Sum_probs=98.1

Q ss_pred             CHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             3879999819928999999973-999874467998067899970999999999986999753379999399999981999
Q 002476          538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE  616 (917)
Q Consensus       538 ~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~  616 (917)
                      +||+.|+..++..  +++.|++ |++++..|..|.||||+|+..|+.+++++|+..|+++|.+|..|+||||+|+.+|+.
T Consensus         4 tpL~~A~~~g~~~--~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           4 KEFMWALKNGDLD--EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHTTCHH--HHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCC
T ss_pred             HHHHHHHHCCCHH--HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCH
T ss_conf             2899999877999--99999984201223222222222222222222222223343202331012332102233204732


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             99999986599999888999889999969999998
Q 002476          617 KMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK  651 (917)
Q Consensus       617 ~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~  651 (917)
                      +++++|+++||+++.      +|..|.||+|+|..
T Consensus        82 ~~v~~Ll~~Gad~~~------~d~~G~t~l~~a~~  110 (118)
T d1myoa_          82 SCVKLLLSKGADKTV------KGPDGLTALEATDN  110 (118)
T ss_dssp             HHHHHHHTTCCCSSS------SSSSTCCCCCTCSS
T ss_pred             HHHHHHHCCCCCCEE------ECCCCCCHHHHHHH
T ss_conf             432433102000000------38999999999868


No 19 
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.39  E-value=1.2e-11  Score=116.55  Aligned_cols=124  Identities=24%  Similarity=0.299  Sum_probs=109.3

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHH
Q ss_conf             76663879999819928999999973-9998744679980678999709999999999869-997533799993999999
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~G-a~in~~D~~G~TpLH~Aa  611 (917)
                      ....++++.++..++..  ++..++. |...+..|..|.|+||+|+..|+..+++.|+..+ .++|.+|.+|+||||+|+
T Consensus       103 ~~~~~~l~~~~~~~~~~--~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~  180 (229)
T d1ixva_         103 NQGVTCLHLAVGKKWFE--VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL  180 (229)
T ss_dssp             TTSCCHHHHHHHTTCHH--HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHH--HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
T ss_conf             23344332212320034--3222211002321247889973502321245332333322222222235666678102210


Q ss_pred             HCCCHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCC
Q ss_conf             8199999999986-59999988899988999996999999819699999998700000
Q 002476          612 YYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA  668 (917)
Q Consensus       612 ~~G~~~iv~~LL~-~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~  668 (917)
                      ..|+.+++++|+. .|++++.      +|..|.||||+|..   .+++++|+++|++.
T Consensus       181 ~~~~~~~v~~Ll~~~gad~~~------~d~~g~t~l~~A~~---~~~~~~Ll~~g~d~  229 (229)
T d1ixva_         181 AEGHGDAAVLLVEKYGAEYDL------VDNKGAKAEDVALN---EQVKKFFLNNVVDA  229 (229)
T ss_dssp             HTTCHHHHHHHHHHHCCCSCC------CCTTSCCTGGGCSC---HHHHHHHHHHCCCC
T ss_pred             CCCCHHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHH---HHHHHHHHHCCCCC
T ss_conf             125199999999965999888------58999999999846---78999999769999


No 20 
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.38  E-value=2.7e-12  Score=122.29  Aligned_cols=136  Identities=21%  Similarity=0.190  Sum_probs=114.1

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCC--CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf             76663879999819928999999973-99987--4467998067899970999999999986999753379999399999
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTT--EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA  610 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n--~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~A  610 (917)
                      ..+.++++.++..+...  ++..+.. +...+  ..+..+.++++.++..++.+++..|+..|.+.+.+|..|+||||+|
T Consensus        68 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a  145 (229)
T d1ixva_          68 DSGWTPFHIACSVGNLE--VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA  145 (229)
T ss_dssp             TTSCCHHHHHHHHTCHH--HHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf             22222222111123323--3333222222222222322334433221232003432222110023212478899735023


Q ss_pred             HHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-HCCCCCCCCCCCCC
Q ss_conf             9819999999998659-9999888999889999969999998196999999987-00000323344343
Q 002476          611 AYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE-QALVAQFNDMTLAG  677 (917)
Q Consensus       611 a~~G~~~iv~~LL~~G-A~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle-~ga~~~l~~~~l~~  677 (917)
                      +..|+.++++.|+..| .+++.      +|..|.||||+|+..|+.+++++|++ .|++.+..+-....
T Consensus       146 ~~~~~~~~~~~Ll~~~~~~in~------~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t  208 (229)
T d1ixva_         146 ASVGSLKLIELLCGLGKSAVNW------QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK  208 (229)
T ss_dssp             HHHTCHHHHHHHHTTTCCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCC
T ss_pred             HHCCCCCCCCCCCCCCCCCCCC------CCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             2124533233332222222223------56666781022101251999999999659998885899999


No 21 
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37  E-value=3.5e-12  Score=121.29  Aligned_cols=126  Identities=18%  Similarity=0.202  Sum_probs=99.0

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC-CCCC------CCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCC
Q ss_conf             76663879999819928999999973-9998------7446799806789997099999999998699975337-99993
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKT------TEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWT  605 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~------n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D-~~G~T  605 (917)
                      ..+.++++.++..++..  ++..++. +...      +.....|.|+||.|+..+....+.+|+..|+.++..+ .+|+|
T Consensus        70 ~~g~t~l~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T  147 (221)
T d1iknd_          70 FRGNTPLHLACEQGCLA--SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRT  147 (221)
T ss_dssp             TTCCCHHHHHHHHTCHH--HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred             CCCCCCCCCCCCCCCCC--CCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCCC
T ss_conf             23222222233322222--1110111013233322222223343213567755598223010013686311224467778


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
Q ss_conf             99999981999999999865999998889998899999699999981969999999870000
Q 002476          606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV  667 (917)
Q Consensus       606 pLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~  667 (917)
                      |||+|+..|+.+++++|+++||+++.      +|..|.||+|+|+..++.+++++|.+.+.+
T Consensus       148 ~L~~A~~~g~~~~v~~Ll~~gad~~~------~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         148 ALHLAVDLQNPDLVSLLLKCGADVNR------VTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTTCCSCC------CCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             43111122248988889863886456------699998999999987889999999982873


No 22 
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35  E-value=7.5e-11  Score=109.38  Aligned_cols=117  Identities=15%  Similarity=0.103  Sum_probs=94.7

Q ss_pred             CCCCHHHHHHHCCCCHHHHHHHHHC-CCCCC-CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             6663879999819928999999973-99987-446799806789997099999999998699975337999939999998
Q 002476          535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTT-EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY  612 (917)
Q Consensus       535 ~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n-~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~  612 (917)
                      ....+++.........  ....+.. ..+.. ..+..|.++||.|+..+...+++.++..|..++.+|..|.||||+|+.
T Consensus       109 ~~~~~l~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~  186 (228)
T d1k1aa_         109 DGLTALHVAVNTECQE--TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG  186 (228)
T ss_dssp             TSCCHHHHHHHHTCHH--HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCH--HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf             2222222222222100--13443001233222210002557889887510023443222022322212368616899998


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             19999999998659999988899988999996999999819699999
Q 002476          613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAA  659 (917)
Q Consensus       613 ~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~  659 (917)
                      .|+.+++++|+++||+++.      +|..|.||||+|+.+|+.++++
T Consensus       187 ~g~~~~v~~Ll~~Gad~n~------~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         187 RGLLPLVRTLVRSGADSSL------KNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HTCHHHHHHHHHTTCCTTC------CCTTSCCTTTTCSSHHHHHHHT
T ss_pred             CCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCCCCCC
T ss_conf             5879999999987899988------7899999999998687703538


No 23 
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.34  E-value=1.1e-10  Score=107.94  Aligned_cols=140  Identities=15%  Similarity=0.082  Sum_probs=105.0

Q ss_pred             CCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCH-------HHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             76663879999819928999999973-999874467998067899970999-------9999999869997533799993
Q 002476          534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYT-------WAILLFSWSGLSLDFRDKYGWT  605 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~-------~~v~~LL~~Ga~in~~D~~G~T  605 (917)
                      .++.|+||.|+..++..  +++.|++ |++++.+|..|.||||+|+..++.       .++..+   ...++.+|..|+|
T Consensus       105 ~~G~T~LH~Aa~~g~~~--~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l---~~~~~~~d~~g~t  179 (301)
T d1sw6a_         105 EHGNTPLHWLTSIANLE--LVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL---YPCLILEDSMNRT  179 (301)
T ss_dssp             TTCCCHHHHHHHTTCHH--HHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH---GGGGGEECTTCCC
T ss_pred             CCCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH---HHHHHHCCCCCCC
T ss_conf             99988899999867999--999999878997767764351777742202202466699999997---6455513453277


Q ss_pred             HHHHHHHCCCH------------HHHHHHHHCCCCCCCCC-------------------------------CCCCCCCCC
Q ss_conf             99999981999------------99999986599999888-------------------------------999889999
Q 002476          606 ALHWAAYYGRE------------KMVVDLLSAGAKPNLVT-------------------------------DPTSQNPGG  642 (917)
Q Consensus       606 pLH~Aa~~G~~------------~iv~~LL~~GA~~~~~t-------------------------------D~~~~d~~G  642 (917)
                      |||+++..+..            .++..++..+.......                               .++.+|..|
T Consensus       180 ~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G  259 (301)
T d1sw6a_         180 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG  259 (301)
T ss_dssp             HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTS
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             87999998375541899999899999999865872000024566404689886014889999866778860766878999


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             969999998196999999987000003233443432
Q 002476          643 LNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN  678 (917)
Q Consensus       643 ~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~~  678 (917)
                      .||||+|+..|+.+++++|++.|++.++.+.....+
T Consensus       260 ~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tp  295 (301)
T d1sw6a_         260 DTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP  295 (301)
T ss_dssp             CCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf             889999998687999999998799999989999999


No 24 
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33  E-value=1.1e-11  Score=116.97  Aligned_cols=140  Identities=18%  Similarity=0.133  Sum_probs=120.6

Q ss_pred             CCCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC------CCCCCCCC
Q ss_conf             876663879999819928999999973-99987446799806789997099999999998699975------33799993
Q 002476          533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD------FRDKYGWT  605 (917)
Q Consensus       533 ~~~~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in------~~D~~G~T  605 (917)
                      ..++.||||.|+..++..  ++..|++ |++++..|..|.||||+++..|+..+++.|+..+....      .....|.|
T Consensus        36 d~~g~TpLh~A~~~~~~~--iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t  113 (221)
T d1iknd_          36 NNLQQTPLHLAVITNQPE--IAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT  113 (221)
T ss_dssp             CTTCCCHHHHHHHTTCHH--HHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf             899995463433433222--333322222222223223222222233322222111011101323332222222334321


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99999981999999999865999998889998899999699999981969999999870000032334434322
Q 002476          606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI  679 (917)
Q Consensus       606 pLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~~i  679 (917)
                      |||+|+..|+.+++.+|+..|+..+..     .+..|.||+|+|+..|+.+++++|+++|++.+..+.....++
T Consensus       114 ~l~~a~~~~~~~~~~~l~~~~~~~~~~-----~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl  182 (221)
T d1iknd_         114 CLHLASIHGYLGIVELLVSLGADVNAQ-----EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY  182 (221)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHTCCTTCC-----CTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGG
T ss_pred             HHHHHHHCCCHHHEEEECCCCCCCCCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf             356775559822301001368631122-----446777843111122248988889863886456699998999


No 25 
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32  E-value=1e-11  Score=117.10  Aligned_cols=96  Identities=18%  Similarity=0.123  Sum_probs=91.0

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             80678999709999999999869997533799993999999819999999998659999988899988999996999999
Q 002476          571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS  650 (917)
Q Consensus       571 ~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~  650 (917)
                      .++||.||..|+.++++.|++.|+++|.+|.+|+||||+|+..|+.+++++|++.|++++.      +|..|.||||+|+
T Consensus         2 l~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~------~d~~g~tpLh~A~   75 (130)
T d1ycsb1           2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------ADSDGWTPLHCAA   75 (130)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCTTCCCHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCC
T ss_conf             5999999993999999999986997561002111111222222222222222222222222------1236764222321


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             8196999999987000003233
Q 002476          651 KKGFDGLAAFLSEQALVAQFND  672 (917)
Q Consensus       651 ~~G~~~iv~~Lle~ga~~~l~~  672 (917)
                      ..|+.+++++|+++|++.+..+
T Consensus        76 ~~g~~~~v~~Ll~~ga~v~~~~   97 (130)
T d1ycsb1          76 SCNNVQVCKFLVESGAAVFAMT   97 (130)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCC
T ss_pred             HHHHHHHHHHHHHCCCCCCCCC
T ss_conf             0268899999998699866466


No 26 
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30  E-value=4.3e-11  Score=111.53  Aligned_cols=130  Identities=18%  Similarity=0.210  Sum_probs=114.1

Q ss_pred             CCHHHHHHHCCCCHHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             63879999819928999999973--9998744679980678999709999999999869997533799993999999819
Q 002476          537 KDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG  614 (917)
Q Consensus       537 ~~~L~~a~~~~~l~~~Lv~~Ll~--ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G  614 (917)
                      .+.|+.|+..|++.  .++.|+.  +++++..|..|.||||+|+ .|..+++..|+..+++++..+..|.+|++.++..+
T Consensus         3 g~~L~~Aa~~g~~~--~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~   79 (156)
T d1bd8a_           3 GDRLSGAAARGDVQ--EVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHHTCHH--HHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CHHHHHHHHCCCHH--HHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             17999999958999--9999999589998864899984133432-22222222222222222222222222222222222


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99999999865999998889998899999699999981969999999870000032334434
Q 002476          615 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA  676 (917)
Q Consensus       615 ~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~  676 (917)
                      +.++++.+++.|++++.      +|..|.||+++|+..|+.+++++|+ .|++.+..+....
T Consensus        80 ~~~~~~~~l~~~~~~n~------~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~  134 (156)
T d1bd8a_          80 FLDTLKVLVEHGADVNV------PDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGL  134 (156)
T ss_dssp             CHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSC
T ss_pred             CCCCCCCCCCCCCCCCC------CCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
T ss_conf             22222222222122112------3677872221222233222211112-2256646689999


No 27 
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.29  E-value=8.8e-14  Score=135.68  Aligned_cols=133  Identities=11%  Similarity=0.031  Sum_probs=109.9

Q ss_pred             CCCCHHHHHHHCCCCHHH-HHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHH
Q ss_conf             666387999981992899-9999973-999874467998067899970999999999986999753379--999399999
Q 002476          535 EAKDSFFELTLKSKLKEW-LLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK--YGWTALHWA  610 (917)
Q Consensus       535 ~~~~~L~~a~~~~~l~~~-Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~--~G~TpLH~A  610 (917)
                      .+.++|+.++..|+.... +++.|+. |++++..|..|.||||+||..|+.++|++|++.|++++..|.  +|+||||+|
T Consensus        89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A  168 (346)
T d2ajaa1          89 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLA  168 (346)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf             88849999998599889999999983898553368999979999998789999999998699702145556998743899


Q ss_pred             HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf             981999999999865999998889998899999699999981969999999870000032
Q 002476          611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF  670 (917)
Q Consensus       611 a~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l  670 (917)
                      +.+||.++|++|++.|++....+   ..+..|.||++.|+.+||.+++++|++.|++...
T Consensus       169 a~~g~~~iv~~Ll~~~~~~~~~~---~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~  225 (346)
T d2ajaa1         169 AENGHLHVLNRLCELAPTEATAM---IQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY  225 (346)
T ss_dssp             HHTTCHHHHHHHHHSCGGGHHHH---HHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCC---CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCH
T ss_conf             88756799999997699420120---0168996311577624889999999968998663


No 28 
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.28  E-value=8.8e-12  Score=117.74  Aligned_cols=103  Identities=16%  Similarity=0.064  Sum_probs=95.7

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             80678999709999999999869997533799993999999819999999998659999988899988999996999999
Q 002476          571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS  650 (917)
Q Consensus       571 ~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~  650 (917)
                      .|||++|+..|+.++++.|++.|+++|.+|..|+||||+|+.+|+.+++.+|+..|++++.      +|..|.||||+|+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~------~d~~g~tpLh~A~   76 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITPLLSAV   76 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC------CSSSCSCHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE------CCCCCCCCHHHHH
T ss_conf             7289999987799999999984201223222222222222222222222223343202331------0123321022332


Q ss_pred             HCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             81969999999870000032334434322
Q 002476          651 KKGFDGLAAFLSEQALVAQFNDMTLAGNI  679 (917)
Q Consensus       651 ~~G~~~iv~~Lle~ga~~~l~~~~l~~~i  679 (917)
                      ..|+.+++++|+++|++.+..+.....++
T Consensus        77 ~~~~~~~v~~Ll~~Gad~~~~d~~G~t~l  105 (118)
T d1myoa_          77 YEGHVSCVKLLLSKGADKTVKGPDGLTAL  105 (118)
T ss_dssp             TTTCCHHHHHHHTTCCCSSSSSSSTCCCC
T ss_pred             HCCCHHHHHHHHCCCCCCEEECCCCCCHH
T ss_conf             04732432433102000000389999999


No 29 
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.27  E-value=3.9e-11  Score=111.96  Aligned_cols=76  Identities=22%  Similarity=0.135  Sum_probs=60.4

Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             53379999399999981999999999865999998889998899999699999981969999999870000032334434
Q 002476          597 DFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA  676 (917)
Q Consensus       597 n~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~  676 (917)
                      ...+..|.||||+|+..|+.++++.|+..|++++.      ++..|.||||+|+..|+.+++++|+++|++.+..+....
T Consensus       193 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~------~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~  266 (291)
T d1s70b_         193 VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI------KDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ  266 (291)
T ss_dssp             CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             CCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             02467898730488876995441013441011242------125798899999985989999999987999988689999


Q ss_pred             CC
Q ss_conf             32
Q 002476          677 GN  678 (917)
Q Consensus       677 ~~  678 (917)
                      .+
T Consensus       267 Ta  268 (291)
T d1s70b_         267 TA  268 (291)
T ss_dssp             CT
T ss_pred             CH
T ss_conf             99


No 30 
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.19  E-value=1.2e-09  Score=98.69  Aligned_cols=132  Identities=18%  Similarity=0.173  Sum_probs=92.0

Q ss_pred             CCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCC--------------------------------
Q ss_conf             663879999819928999999973-99987446799806789997099--------------------------------
Q 002476          536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--------------------------------  582 (917)
Q Consensus       536 ~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~--------------------------------  582 (917)
                      +.++||.||..++..  +++.|+. |++++..+..+.++++.++..+.                                
T Consensus        23 G~t~L~~A~~~g~~e--~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (209)
T d1ot8a_          23 GETSLHLAARFARAD--AAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARL  100 (209)
T ss_dssp             CCCHHHHHHHTTCHH--HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             CCCHHHHHHHCCCHH--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             988999999839999--999987502233222222222222222222222222222222222322222233322222222


Q ss_pred             --HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf             --999999998699975337999939999998199999999986599999888999889999969999998196999999
Q 002476          583 --TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAF  660 (917)
Q Consensus       583 --~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~  660 (917)
                        ....+.|+..+++++.++..|+||||+++.+|...++..|+..+++++.      .|..|.||||+|+..|+.+++++
T Consensus       101 ~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~------~d~~g~TpL~~A~~~g~~~~v~~  174 (209)
T d1ot8a_         101 AIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA------QDDKDETPLFLAAREGSYEASKA  174 (209)
T ss_dssp             TCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCC------CCCCCCCCCCHHCCCCHHHHHHH
T ss_conf             101235555310146555577999823000036863145320122223454------43444552112103249999999


Q ss_pred             HHHHCCCCCCCCCCC
Q ss_conf             987000003233443
Q 002476          661 LSEQALVAQFNDMTL  675 (917)
Q Consensus       661 Lle~ga~~~l~~~~l  675 (917)
                      |+++|++.+..+...
T Consensus       175 Ll~~gad~n~~d~~g  189 (209)
T d1ot8a_         175 LLDNFANREITDHMD  189 (209)
T ss_dssp             HHHTTCCTTCCCTTS
T ss_pred             HHHCCCCCCCCCCCC
T ss_conf             998799998868999


No 31 
>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18  E-value=3.4e-11  Score=112.40  Aligned_cols=81  Identities=36%  Similarity=0.792  Sum_probs=74.5

Q ss_pred             EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCC
Q ss_conf             58733898668997489998778887333788646998099003203010670377389999962799999579976541
Q 002476          367 ITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQ  446 (917)
Q Consensus       367 I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~~se  446 (917)
                      |++|||.||++.||++|+|.|.+|..     ...+.|+||+..+++..++++.++|.+|||.+|.|++.|+.+++ ..+.
T Consensus         2 It~isP~~G~~~GGt~V~I~G~~f~~-----~~~~~c~fG~~~~~~~~vs~~~i~C~tP~~~~G~v~v~Vs~ng~-~~s~   75 (82)
T d2cxka1           2 VTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQ-IISN   75 (82)
T ss_dssp             CCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTE-ECSC
T ss_pred             EEEECCCCEECCCCEEEEEEECCCCC-----CCEEEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEEEEECCE-EECC
T ss_conf             93981896608999999999736664-----45079999720030599712599998475356158999998999-8136


Q ss_pred             CCCCCCC
Q ss_conf             1113447
Q 002476          447 VLNFEYR  453 (917)
Q Consensus       447 ~~~Feyr  453 (917)
                      ...||||
T Consensus        76 ~~~F~Yr   82 (82)
T d2cxka1          76 SVVFEYK   82 (82)
T ss_dssp             CEEEEEC
T ss_pred             CCEEEEC
T ss_conf             7088859


No 32 
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.14  E-value=3.5e-12  Score=121.34  Aligned_cols=103  Identities=15%  Similarity=0.115  Sum_probs=90.6

Q ss_pred             CCCCCCCCCHHHHHHHHCCCHHHHHH---HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             87446799806789997099999999---998699975337999939999998199999999986599999888999889
Q 002476          563 TTEYDVHGQGVIHLCAMLGYTWAILL---FSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN  639 (917)
Q Consensus       563 ~n~~d~~G~T~LHlAA~~G~~~~v~~---LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d  639 (917)
                      ++.++..|.|+||+||..|+.++++.   |+..|+++|.+|..|+||||+||.+||.++|++|++.|++++...    .+
T Consensus        83 ~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~----~~  158 (346)
T d2ajaa1          83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM----IQ  158 (346)
T ss_dssp             HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHH----HS
T ss_pred             HHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC----CC
T ss_conf             87636788849999998599889999999983898553368999979999998789999999998699702145----55


Q ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf             999969999998196999999987000003
Q 002476          640 PGGLNAADIASKKGFDGLAAFLSEQALVAQ  669 (917)
Q Consensus       640 ~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~  669 (917)
                      ..|.||||+|+..||.+++++|++.|+...
T Consensus       159 ~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~  188 (346)
T d2ajaa1         159 AENYHAFRLAAENGHLHVLNRLCELAPTEA  188 (346)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHSCGGGH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             699874389988756799999997699420


No 33 
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11  E-value=3.1e-10  Score=103.80  Aligned_cols=138  Identities=22%  Similarity=0.187  Sum_probs=89.9

Q ss_pred             CCCCHHHHHHHCCCCH--HHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCC-----------
Q ss_conf             6663879999819928--999999973-99987446799806789997099999999998699975337-----------
Q 002476          535 EAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-----------  600 (917)
Q Consensus       535 ~~~~~L~~a~~~~~l~--~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D-----------  600 (917)
                      +|.||||.|+..++..  ++|+..+.+ |++++..|..|.||||+|+..|+.++++.|+..|++++..+           
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~   81 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC   81 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88429999998399999999999899779977766899996241000135533333332222233433332223332222


Q ss_pred             ------------------------------------------------------------CCCCCHHHHHHHCCCHHHHH
Q ss_conf             ------------------------------------------------------------99993999999819999999
Q 002476          601 ------------------------------------------------------------KYGWTALHWAAYYGREKMVV  620 (917)
Q Consensus       601 ------------------------------------------------------------~~G~TpLH~Aa~~G~~~iv~  620 (917)
                                                                                  ..|.++|++|+..+...++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  161 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ  161 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             23452100234420454322322333322222222222221001344300123322221000255788988751002344


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9986599999888999889999969999998196999999987000003233443432
Q 002476          621 DLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN  678 (917)
Q Consensus       621 ~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~~  678 (917)
                      .++..|...+.      +|..|.||+++|+..|+.+++++|+++|++.+..+.....+
T Consensus       162 ~~~~~~~~~~~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~Tp  213 (228)
T d1k1aa_         162 LLLQHGANVNA------QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTP  213 (228)
T ss_dssp             HHHHTTCCTTC------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred             HHHHHCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf             32220223222------12368616899998587999999998789998878999999


No 34 
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.10  E-value=5.8e-10  Score=101.39  Aligned_cols=96  Identities=14%  Similarity=0.123  Sum_probs=85.1

Q ss_pred             CCCCCHHHHHHHCCC--CHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf             766638799998199--28999999973-999874467998067899970999999999986999753379999399999
Q 002476          534 PEAKDSFFELTLKSK--LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA  610 (917)
Q Consensus       534 ~~~~~~L~~a~~~~~--l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~A  610 (917)
                      ..+.++||.++..+.  ..+ +++.|++ |++++.+|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|
T Consensus        43 ~~g~t~Lh~A~~~~~~~~~~-iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A  121 (154)
T d1dcqa1          43 EPDETALHLAVRSVDRTSLH-IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA  121 (154)
T ss_dssp             STTCBHHHHHHHHCCTTTHH-HHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCCCCHHHHHHHHCCCCCHH-HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             99982699999832899899-99999974997333131210100011112333322122135755024478999999999


Q ss_pred             HHCCCHHHHHHHHHCCCCCC
Q ss_conf             98199999999986599999
Q 002476          611 AYYGREKMVVDLLSAGAKPN  630 (917)
Q Consensus       611 a~~G~~~iv~~LL~~GA~~~  630 (917)
                      +..|+.+++++|++.++...
T Consensus       122 ~~~~~~~i~~~L~~~~~~~~  141 (154)
T d1dcqa1         122 KRLKHEHCEELLTQALSGRF  141 (154)
T ss_dssp             HHTTCHHHHHHHHHHHTTCC
T ss_pred             HHCCCHHHHHHHHHHCCCCC
T ss_conf             99399999999999388977


No 35 
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.09  E-value=2.8e-10  Score=104.29  Aligned_cols=84  Identities=13%  Similarity=0.001  Sum_probs=52.9

Q ss_pred             CCCCCCC-CCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH-------HHHHHHHHCCCCCCC
Q ss_conf             9998744-67998067899970999999999986999753379999399999981999-------999999865999998
Q 002476          560 GSKTTEY-DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE-------KMVVDLLSAGAKPNL  631 (917)
Q Consensus       560 ga~~n~~-d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~-------~iv~~LL~~GA~~~~  631 (917)
                      +.++|.. |..|.||||+||..|+.++|++|+..|++++.+|..|+||||.||..++.       +++.+|..   +...
T Consensus        96 ~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~~~  172 (301)
T d1sw6a_          96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLIL  172 (301)
T ss_dssp             CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGGE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH---HHHH
T ss_conf             8786868689998889999986799999999987899776776435177774220220246669999999764---5551


Q ss_pred             CCCCCCCCCCCCCHHHHHHHC
Q ss_conf             889998899999699999981
Q 002476          632 VTDPTSQNPGGLNAADIASKK  652 (917)
Q Consensus       632 ~tD~~~~d~~G~TpL~lA~~~  652 (917)
                            .|..|+||+|.++..
T Consensus       173 ------~d~~g~t~lh~~~~~  187 (301)
T d1sw6a_         173 ------EDSMNRTILHHIIIT  187 (301)
T ss_dssp             ------ECTTCCCHHHHHHHH
T ss_pred             ------CCCCCCCHHHHHHHH
T ss_conf             ------345327787999998


No 36 
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08  E-value=2.4e-10  Score=104.79  Aligned_cols=102  Identities=19%  Similarity=0.198  Sum_probs=89.4

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHH
Q ss_conf             998067899970999999999986999753379999399999981999999999865999998889998899999-6999
Q 002476          569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGL-NAAD  647 (917)
Q Consensus       569 ~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~~iv~~LL~~GA~~~~~tD~~~~d~~G~-TpL~  647 (917)
                      .+.++||+||..|+.+++++|+.+|+++|.+|..|+||||+|+ .|+.+++++|+..|++++.      ++..|. ||+|
T Consensus         2 p~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~------~~~~~~~~~L~   74 (125)
T d1bi7b_           2 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------ADPATLTRPVH   74 (125)
T ss_dssp             CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------CCTTTCCCHHH
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC------CCCCCCCCCCC
T ss_conf             8705999999877999999999859741332221222222222-2222222212222222222------22222222222


Q ss_pred             HHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             999819699999998700000323344343
Q 002476          648 IASKKGFDGLAAFLSEQALVAQFNDMTLAG  677 (917)
Q Consensus       648 lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~  677 (917)
                      +|+..|+.+++++|+++|++.+..+.....
T Consensus        75 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T  104 (125)
T d1bi7b_          75 DAAREGFLDTLVVLHRAGARLDVRDAWGRL  104 (125)
T ss_dssp             HHHHHTCHHHHHHHHHHTCCSSCCCTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             222322222222221222223324578989


No 37 
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02  E-value=1.1e-09  Score=98.89  Aligned_cols=96  Identities=17%  Similarity=0.116  Sum_probs=70.3

Q ss_pred             CCCHHHHHHHCCCC--HHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHH
Q ss_conf             66387999981992--8999999973-99987446799806789997099999999998-69997533799993999999
Q 002476          536 AKDSFFELTLKSKL--KEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAA  611 (917)
Q Consensus       536 ~~~~L~~a~~~~~l--~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~-~Ga~in~~D~~G~TpLH~Aa  611 (917)
                      +..++.........  .+-+++.|++ |++++.+|..|.||||+|+..|+.+++++||. .|+++|.+|.+|.||||+|+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~  261 (285)
T d1wdya_         182 GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV  261 (285)
T ss_dssp             SCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf             98332233223430179999999997799988668999982411221386999999998089998687999989999999


Q ss_pred             HCCCHHHHHHHHHCCCCCCC
Q ss_conf             81999999999865999998
Q 002476          612 YYGREKMVVDLLSAGAKPNL  631 (917)
Q Consensus       612 ~~G~~~iv~~LL~~GA~~~~  631 (917)
                      .+|+.++|++||++||++|+
T Consensus       262 ~~~~~eiv~~Ll~~GAd~n~  281 (285)
T d1wdya_         262 ELKLKKIAELLCKRGASTDC  281 (285)
T ss_dssp             HTTCHHHHHHHHHHSSCSCC
T ss_pred             HCCCHHHHHHHHHCCCCCCC
T ss_conf             85979999999987989986


No 38 
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.01  E-value=4.6e-09  Score=93.32  Aligned_cols=134  Identities=22%  Similarity=0.200  Sum_probs=120.8

Q ss_pred             CCCHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             663879999819928999999973-9998744679980678999709999999999869997533799993999999819
Q 002476          536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG  614 (917)
Q Consensus       536 ~~~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G  614 (917)
                      ..+||+.|+..|+..  +++.|++ |++++ .|..|.||||+|+..++..++..++......+..+..+.+++++++...
T Consensus         2 ~~t~L~~Aa~~g~~~--~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (153)
T d1awcb_           2 LGKKLLEAARAGQDD--EVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG   78 (153)
T ss_dssp             HHHHHHHHHHHTCHH--HHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             CCHHHHHHHHCCCHH--HHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             797999999878999--9999998699834-2447875333432322222222222222222212222333232222331


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9999999986599999888999889999969999998196999999987000003233443432
Q 002476          615 REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN  678 (917)
Q Consensus       615 ~~~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga~~~l~~~~l~~~  678 (917)
                      +.++++.|+..|++.+.      ++..|.|||++|+..|+.+++++|++.|++.+..+.....+
T Consensus        79 ~~~~~~~l~~~~~~~~~------~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tp  136 (153)
T d1awcb_          79 HANIVEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTA  136 (153)
T ss_dssp             CHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCEEEECCCCCCCCCCC------CCCCCCHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCH
T ss_conf             10122122246876123------22467347776643022241231143446772668989999


No 39 
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92  E-value=4.5e-09  Score=93.45  Aligned_cols=125  Identities=18%  Similarity=0.260  Sum_probs=115.6

Q ss_pred             CHHHHHHHCCCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             3879999819928999999973-999874467998067899970999999999986999753379999399999981999
Q 002476          538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE  616 (917)
Q Consensus       538 ~~L~~a~~~~~l~~~Lv~~Ll~-ga~~n~~d~~G~T~LHlAA~~G~~~~v~~LL~~Ga~in~~D~~G~TpLH~Aa~~G~~  616 (917)
                      ++||.|+..++..  +++.|++ |++++..|..|.||||+|+ .|+.+++++|+..|++++.++..|.++|++++..++.
T Consensus         3 ~~Lh~Aa~~g~~~--~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~   79 (156)
T d1ihba_           3 NELASAAARGDLE--QLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL   79 (156)
T ss_dssp             HHHHHHHHHTCHH--HHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             HHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8999999867999--999999878796746774453212222-2222222222222222212123575322233222222


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCC-CCCCC
Q ss_conf             99999986599999888999889999969999998196999999987000-00323
Q 002476          617 KMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQAL-VAQFN  671 (917)
Q Consensus       617 ~iv~~LL~~GA~~~~~tD~~~~d~~G~TpL~lA~~~G~~~iv~~Lle~ga-~~~l~  671 (917)
                      .++..|+..+.+++.      .+..|.+|+++|+..++.+++++|++++. +.+..
T Consensus        80 ~~~~~l~~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~  129 (156)
T d1ihba_          80 DTLQTLLEFQADVNI------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHR  129 (156)
T ss_dssp             HHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred             CCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             222222112222223------56443211223333221222222221220112245


No 40 
>d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.74  E-value=6.1e-05  Score=56.34  Aligned_cols=78  Identities=14%  Similarity=0.198  Sum_probs=65.1

Q ss_pred             CCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCC
Q ss_conf             50358733898668997489998778887333788646998099003203010670377389999962799999579976
Q 002476          364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKP  443 (917)
Q Consensus       364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~  443 (917)
                      -..|+.|+|..|+  +|++|+|.|.+|.+      ....|.||+.++....|++..++|.+|++.+|.+++.|..++.. 
T Consensus         3 ~P~I~si~P~~g~--~Gt~VtI~G~~F~~------~~~~v~~g~~~~~v~~~s~t~I~c~vP~~~~g~~~v~V~~~g~~-   73 (81)
T d1qhoa1           3 APQIGSVAPNMGI--PGNVVTIDGKGFGT------TQGTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVTAGGVS-   73 (81)
T ss_dssp             SCEEEEEESSEEC--TTCEEEEEEECCCS------SCCEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEEETTEE-
T ss_pred             CCEEEEEECCCCC--CCCEEEEEEECCCC------CCEEEEECCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCEE-
T ss_conf             9999389799779--99899999989989------97589979988899997899799990799993489999979998-


Q ss_pred             CCCCCCCC
Q ss_conf             54111134
Q 002476          444 ISQVLNFE  451 (917)
Q Consensus       444 ~se~~~Fe  451 (917)
                       +....|+
T Consensus        74 -s~~~~F~   80 (81)
T d1qhoa1          74 -SNLYSYN   80 (81)
T ss_dssp             -CCCEEEE
T ss_pred             -CCCEEEE
T ss_conf             -5668769


No 41 
>d1uadc_ b.1.18.18 (C:) Exocyst complex component Sec5, Ral-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.65  E-value=0.00011  Score=53.96  Aligned_cols=87  Identities=14%  Similarity=0.107  Sum_probs=69.2

Q ss_pred             CCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCC-EEEEECCCC--CCEEECCCCEEEEECCCCCCCEEEEEEEEC
Q ss_conf             65035873389866899748999877888733378864-699809900--320301067037738999996279999957
Q 002476          363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSN-MFCVCGEVR--VPAEFVQAGVYRCFLPPHSPGLFLLYMSLD  439 (917)
Q Consensus       363 ~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~-~~c~FG~~~--Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~  439 (917)
                      +...|+.|+|..|.  |||.|+|.|.+|..    .... ..+.+|..+  +....+.+..++|.+||+.+|..++.|...
T Consensus         3 ~PP~ItsisP~~G~--gGT~VTI~G~~f~~----~~s~~~~V~v~g~~~~~~~~~~s~~~I~c~tp~~~~g~~~v~v~~~   76 (92)
T d1uadc_           3 QPPLVTGISPNEGI--PWTKVTIRGENLGT----GPTDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTK   76 (92)
T ss_dssp             CCCEEEEEESSEES--TTCEEEEEEECSCS----SGGGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEET
T ss_pred             CCCEEEEEECCCCC--CCCEEEEEEECCCC----CCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEC
T ss_conf             89997699599789--99599999978789----8775348999064358876027861999976898885218999992


Q ss_pred             CCCCCCCCCCCCCCCC
Q ss_conf             9976541111344798
Q 002476          440 GHKPISQVLNFEYRSP  455 (917)
Q Consensus       440 n~~~~se~~~Feyr~~  455 (917)
                      ++-..+....|+|.+|
T Consensus        77 ~g~~~ts~~~F~y~~P   92 (92)
T d1uadc_          77 SGGRGTSTVSFKLLKP   92 (92)
T ss_dssp             TTEECEESSCCEECCC
T ss_pred             CCCEEEECCEEEEECC
T ss_conf             9986998188997295


No 42 
>d1p7hl1 b.1.18.1 (L:576-678) T-cell transcription factor NFAT1 (NFATC2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.64  E-value=7.6e-05  Score=55.52  Aligned_cols=84  Identities=13%  Similarity=0.081  Sum_probs=64.3

Q ss_pred             CCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEE-EC-----------CCCEEEEECCCC-C-
Q ss_conf             650358733898668997489998778887333788646998099003203-01-----------067037738999-9-
Q 002476          363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FV-----------QAGVYRCFLPPH-S-  428 (917)
Q Consensus       363 ~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~-~i-----------~~gvlrC~~Pph-~-  428 (917)
                      ++..|+.+||..|+..||++|+|+|..|..       +..|.||+...... +|           +...|+|.+||- . 
T Consensus         1 ~~P~I~~~s~~sgpv~GG~ev~llg~~f~~-------~~~V~F~e~~~~~~~~We~~~~~~~~v~~q~aIv~~tPpy~~~   73 (103)
T d1p7hl1           1 ELPMVERQDTDSCLVYGGQQMILTGQNFTS-------ESKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNK   73 (103)
T ss_dssp             CCCEEEEESCSEEETTCCCEEEEEEESCCS-------SCEEEEEEECSSSCEEEEEEECBCTTTCBTTEEEEECCCCSCT
T ss_pred             CCCEEEEECCCCCCCCCCCEEEEEECCCCC-------CCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC
T ss_conf             998699986997304898389999666389-------8789987107886287899631381016100799977998799


Q ss_pred             --CCEEEEEE--EECCCCCCCCCCCCCCCC
Q ss_conf             --96279999--957997654111134479
Q 002476          429 --PGLFLLYM--SLDGHKPISQVLNFEYRS  454 (917)
Q Consensus       429 --~G~V~l~v--~~~n~~~~se~~~Feyr~  454 (917)
                        .+.|.+.+  ..+++ .+|+...|+|.+
T Consensus        74 ~i~~pV~V~v~l~~s~~-~~S~~~~FtY~P  102 (103)
T d1p7hl1          74 HIRTPVKVNFYVINGKR-KRSQPQHFTYHP  102 (103)
T ss_dssp             TCSSCEEEEEEEEETTT-EECCCEEEEEEC
T ss_pred             CCCCCEEEEEEEECCCC-CCCCCCCEEEEE
T ss_conf             87525799999982998-306987879960


No 43 
>d3bmva1 b.1.18.2 (A:496-578) Cyclomaltodextrin glycanotransferase, domain D {Thermoanaerobacterium [TaxId: 28895]}
Probab=97.36  E-value=0.00064  Score=47.18  Aligned_cols=80  Identities=13%  Similarity=0.082  Sum_probs=65.2

Q ss_pred             CCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCC
Q ss_conf             50358733898668997489998778887333788646998099003203010670377389999962799999579976
Q 002476          364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKP  443 (917)
Q Consensus       364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~  443 (917)
                      ...|+.++|..|..  |++|+|.|.+|..     . .-.|.||+.++....|.+..++|.+|++.+|.+++.|...++..
T Consensus         3 tP~I~sisP~~g~~--Gt~VtI~G~~F~~-----~-~~~V~ig~~~~~v~~~s~t~I~~~vP~~~~g~~~v~V~~~~g~~   74 (83)
T d3bmva1           3 SPLIGHVGPTMTKA--GQTITIDGRGFGT-----T-SGQVLFGSTAGTIVSWDDTEVKVKVPSVTPGKYNISLKTSSGAT   74 (83)
T ss_dssp             CCEEEEEECSEECT--TCEEEEEEECCCS-----S-CCEEEETTEECEEEEECSSEEEEECCCCCSEEEEEEEECTTCCB
T ss_pred             CCEEEEEECCCCCC--CCEEEEEECCCCC-----C-CCEEEECCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCE
T ss_conf             99995896998799--9799999637888-----8-63589999999999979999999938999804889999599869


Q ss_pred             CCCCCCCC
Q ss_conf             54111134
Q 002476          444 ISQVLNFE  451 (917)
Q Consensus       444 ~se~~~Fe  451 (917)
                      ......|+
T Consensus        75 s~~~~~F~   82 (83)
T d3bmva1          75 SNTYNNIN   82 (83)
T ss_dssp             CCCEEEEE
T ss_pred             ECCCCCEE
T ss_conf             12315459


No 44 
>d1cxla1 b.1.18.2 (A:497-583) Cyclomaltodextrin glycanotransferase, domain D {Bacillus circulans, different strains [TaxId: 1397]}
Probab=97.32  E-value=0.00054  Score=47.86  Aligned_cols=82  Identities=16%  Similarity=0.088  Sum_probs=64.4

Q ss_pred             CCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCC-CCEE--ECCCCEEEEECCCCCCCEEEEEEEECC
Q ss_conf             5035873389866899748999877888733378864699809900-3203--010670377389999962799999579
Q 002476          364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVR-VPAE--FVQAGVYRCFLPPHSPGLFLLYMSLDG  440 (917)
Q Consensus       364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~-Vpa~--~i~~gvlrC~~Pph~~G~V~l~v~~~n  440 (917)
                      ...|+.++|.+|+  +|++|+|.|.+|.+     . .-.+.||... .++.  .|.+..++|.+|++.+|.+++.|...+
T Consensus         2 tP~I~sisP~~g~--~Gt~VTI~G~~F~~-----~-~~~V~v~~~~~~~~~v~s~s~t~I~~~vP~~~~g~~~v~V~~~~   73 (87)
T d1cxla1           2 TPTIGHVGPMMAK--PGVTITIDGRGFGS-----S-KGTVYFGTTAVSGADITSWEDTQIKVKIPAVAGGNYNIKVANAA   73 (87)
T ss_dssp             SCEEEEEECSEEC--TTCEEEEEEECCCS-----S-CCEEEETTEEEEGGGEEEEETTEEEEECCCCCSEEEEEEEECTT
T ss_pred             CCEEEEEECCCCC--CCCEEEEEEECCCC-----C-CCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECC
T ss_conf             8999798489789--99899999899789-----9-85599961357279999968999999978999820799999699


Q ss_pred             CCCCCCCCCCCCC
Q ss_conf             9765411113447
Q 002476          441 HKPISQVLNFEYR  453 (917)
Q Consensus       441 ~~~~se~~~Feyr  453 (917)
                      +........|+|.
T Consensus        74 g~~s~~~~~F~~l   86 (87)
T d1cxla1          74 GTASNVYDNFEVL   86 (87)
T ss_dssp             CCBCCCEEEEEEC
T ss_pred             CCEEEECCCEEEE
T ss_conf             9378003766990


No 45 
>d1cyga1 b.1.18.2 (A:492-574) Cyclomaltodextrin glycanotransferase, domain D {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.32  E-value=0.00081  Score=46.27  Aligned_cols=80  Identities=15%  Similarity=0.091  Sum_probs=64.5

Q ss_pred             CCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCC
Q ss_conf             50358733898668997489998778887333788646998099003203010670377389999962799999579976
Q 002476          364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKP  443 (917)
Q Consensus       364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~  443 (917)
                      ...|+.++|.-|.  +|++|+|.|.+|..     . .-.+.||+.++....+.+..++|.+|++.+|.+++.|...++..
T Consensus         3 tP~I~sisP~~g~--~Gt~VtI~G~~F~~-----~-~~~V~ig~~~~~v~~~s~t~I~~~vP~~~~G~~~V~V~~~~g~~   74 (83)
T d1cyga1           3 TPIIGHVGPMMGQ--VGHQVTIDGEGFGT-----N-TGTVKFGTTAANVVSWSNNQIVVAVPNVSPGKYNITVQSSSGQT   74 (83)
T ss_dssp             SCEEEEEECSEEC--TTCEEEEEEECCCS-----S-CCEEEETTEECCEEECCSSEEEEECCSCCSEEEEEEEECTTSCB
T ss_pred             CCEEEEEECCCCC--CCCEEEEEECCCCC-----C-CCEEEECCEEEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCE
T ss_conf             8889899899789--99799999744479-----8-63899999898899967999999996788950999999899838


Q ss_pred             CCCCCCCC
Q ss_conf             54111134
Q 002476          444 ISQVLNFE  451 (917)
Q Consensus       444 ~se~~~Fe  451 (917)
                      ......|+
T Consensus        75 s~~~~~F~   82 (83)
T d1cyga1          75 SAAYDNFE   82 (83)
T ss_dssp             CCCEEEEE
T ss_pred             EECCCCEE
T ss_conf             81116559


No 46 
>d3brda1 b.1.18.1 (A:542-660) DNA-binding protein LAG-1 (CSL) {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.03  E-value=0.0009  Score=45.86  Aligned_cols=82  Identities=18%  Similarity=0.177  Sum_probs=69.2

Q ss_pred             CCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEECCCCC--------------
Q ss_conf             650358733898668997489998778887333788646998099003203010670377389999--------------
Q 002476          363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS--------------  428 (917)
Q Consensus       363 ~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~--------------  428 (917)
                      +..-|+.+.|+-|...|+++|+  |.+|..       ++.|+|||+++.+.+|.+.+|.|.+||..              
T Consensus        20 PvPvV~~L~pngG~~~~~lEvt--G~nF~~-------~L~V~FGd~~A~T~~r~~esLvC~vP~~s~~~~~~~~w~~~~~   90 (119)
T d3brda1          20 PCPVVGSLEVDGHGEASRVELH--GRDFKP-------NLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNR   90 (119)
T ss_dssp             SCCEEEEEEEECSGGGCEEEEE--EECCCT-------TEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCT
T ss_pred             CCCEEEEEECCCCCCCCEEEEE--CCCCCC-------CCEEEECCCCCEEEEEECCEEEEECCCHHHHCCCCCCEEEEEC
T ss_conf             8865458702789853279998--867888-------8689989915336998178789988986882555543378505


Q ss_pred             ---CCEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             ---9627999995799765411113447
Q 002476          429 ---PGLFLLYMSLDGHKPISQVLNFEYR  453 (917)
Q Consensus       429 ---~G~V~l~v~~~n~~~~se~~~Feyr  453 (917)
                         +..||+.+.-+.+..-+--..|+|.
T Consensus        91 ~~~~v~vPisLVR~DGvIy~t~~tfty~  118 (119)
T d3brda1          91 TTGDVEVPISLVRDDGVVYSSGLTFSYK  118 (119)
T ss_dssp             TTCCBEEEEEEEETTSEEEEEEEEEETT
T ss_pred             CCCCCEEEEEEEECCCEEEECCCEEEEC
T ss_conf             7876032289994288696167248823


No 47 
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=96.95  E-value=0.0017  Score=43.46  Aligned_cols=46  Identities=17%  Similarity=0.257  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q ss_conf             79999999999976999999999999---99999999997999999998
Q 002476          766 KMAAAARIQHRFRSWKVRKEFLNMRR---QAIKIQAAFRGFQVRKQYGK  811 (917)
Q Consensus       766 ~~~aa~~IQs~~Rg~~~Rk~~~~~r~---aav~IQa~~Rg~~~Rk~y~~  811 (917)
                      ...+++.||++||||.+|++|+++|.   +++.||++||++++|+.|+.
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~~  778 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW  778 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             9999999999999999999999999999999999999999999803699


No 48 
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=96.93  E-value=0.0014  Score=44.09  Aligned_cols=45  Identities=27%  Similarity=0.312  Sum_probs=30.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999769999999999---9999999999997999999998
Q 002476          767 MAAAARIQHRFRSWKVRKEFLNM---RRQAIKIQAAFRGFQVRKQYGK  811 (917)
Q Consensus       767 ~~aa~~IQs~~Rg~~~Rk~~~~~---r~aav~IQa~~Rg~~~Rk~y~~  811 (917)
                      ..+++.||++||||.+|++|+++   +.+++.||++||++++||.|..
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~  782 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPW  782 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             999999999999999999999999999999999999999999823699


No 49 
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=96.50  E-value=0.0089  Score=36.92  Aligned_cols=46  Identities=20%  Similarity=0.275  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999979999999988---779999999999999999887
Q 002476          787 LNMRRQAIKIQAAFRGFQVRKQYGKI---LWSVGVLEKAILRWRLKRKGF  833 (917)
Q Consensus       787 ~~~r~aav~IQa~~Rg~~~Rk~y~~~---~~av~~IQ~~iRr~r~~r~~l  833 (917)
                      ..+..++++||++||||++|++|+++   +.++.+||+.||+| ..++.+
T Consensus       732 ~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~-~~~r~~  780 (794)
T d2mysa2         732 DKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSF-MNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCC
T ss_conf             9999999999999999999999999999999999999999999-998236


No 50 
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=96.47  E-value=0.01  Score=36.31  Aligned_cols=47  Identities=26%  Similarity=0.530  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999997999999998877---99999999999999998875
Q 002476          787 LNMRRQAIKIQAAFRGFQVRKQYGKILW---SVGVLEKAILRWRLKRKGFR  834 (917)
Q Consensus       787 ~~~r~aav~IQa~~Rg~~~Rk~y~~~~~---av~~IQ~~iRr~r~~r~~lR  834 (917)
                      ..+..+++.||++||||++|++|++++.   ++.+||+.||+| ..|+.++
T Consensus       728 ~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~-~~rr~~~  777 (789)
T d1kk8a2         728 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKW-LVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCH
T ss_conf             9999999999999999999999999999999999999999999-9980369


No 51 
>d1imhc1 b.1.18.1 (C:368-468) T-cell transcription factor NFAT5 (TONEBP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.03  E-value=0.13  Score=26.63  Aligned_cols=84  Identities=13%  Similarity=0.138  Sum_probs=59.2

Q ss_pred             CCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECC----------CCCCEEECCCCEEEEECCC------C
Q ss_conf             50358733898668997489998778887333788646998099----------0032030106703773899------9
Q 002476          364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE----------VRVPAEFVQAGVYRCFLPP------H  427 (917)
Q Consensus       364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~----------~~Vpa~~i~~gvlrC~~Pp------h  427 (917)
                      +..|..+|..-|++.||.+|.|+|..+..     .. -.+.|-+          .++..+.++...++|-+||      .
T Consensus         1 ~P~I~r~s~~s~~v~GG~Ev~lL~ekv~k-----dd-~v~F~e~~~~~~~WE~~~~f~~~~vh~qaiv~ktPpY~~~~I~   74 (101)
T d1imhc1           1 VPEILKKSLHSCSVKGEEEVFLIGKNFLK-----GT-KVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHIT   74 (101)
T ss_dssp             CCEEEEESCCEEETTCCCEEEEEEECCCT-----TC-EEEEESSSCTTCSCEEEECBCGGGCCSSEEEEECCCCSCTTCS
T ss_pred             CCEEEEECCCCEEECCCCEEEEEECCCCC-----CC-EEEEEECCCCCCCEEEEEEECHHHEEEEEEEEECCCCCCCCCC
T ss_conf             98089864882141899689999675088-----98-7999992599965379999883644655699857986686537


Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             996279999957997654111134479
Q 002476          428 SPGLFLLYMSLDGHKPISQVLNFEYRS  454 (917)
Q Consensus       428 ~~G~V~l~v~~~n~~~~se~~~Feyr~  454 (917)
                      .|=.|.+++..+.+ .+|+...|+|.+
T Consensus        75 ~pV~V~~~L~rsd~-~~Se~~~FtY~P  100 (101)
T d1imhc1          75 LPVSVGIYVVTNAG-RSHDVQPFTYTP  100 (101)
T ss_dssp             SCEEEEEEEEETTE-ECCSCEEEEEEC
T ss_pred             CEEEEEEEEEECCC-CCCCCCCEEECC
T ss_conf             33899999996999-734885738788


No 52 
>d1gjia1 b.1.18.1 (A:182-281) p65 subunit of NF-kappa B (NFKB), dimerization domain {Chicken (Gallus gallus), C-rel [TaxId: 9031]}
Probab=92.63  E-value=0.17  Score=25.54  Aligned_cols=83  Identities=14%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             CEEEEECCCCCCCCCCEEEE-EECCCCCCCCCCCCCCEEEEECCC------CC-CEEECCCCEEEEECCCCC-----CCE
Q ss_conf             03587338986689974899-987788873337886469980990------03-203010670377389999-----962
Q 002476          365 FSITDVSPAWAFSNEKTKIL-VTGFFHKDCLHLSKSNMFCVCGEV------RV-PAEFVQAGVYRCFLPPHS-----PGL  431 (917)
Q Consensus       365 f~I~d~sP~w~~~~gg~kVl-I~G~f~~~~~~~~~~~~~c~FG~~------~V-pa~~i~~gvlrC~~Pph~-----~G~  431 (917)
                      ..|...|-.-|+..||.+|. ++|..+..       ...+.|.+.      ++ ++.+.+...++|-.||..     |=.
T Consensus         4 L~I~r~s~~s~sv~GG~Ei~LLc~Kv~k~-------di~V~F~e~~WE~~~~f~~~dvh~q~aIvf~tP~Y~~~I~~pV~   76 (100)
T d1gjia1           4 LRICRVNKNCGSVKGGDEIFILCDKVQKD-------DIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPIT   76 (100)
T ss_dssp             CCEEEESCSEEETTCCCEEEEEESCCCGG-------GCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSCCSSCEE
T ss_pred             CEEEEECCCCEECCCCCEEEEEECCCCCC-------CCEEEEECCCCEEEEEECHHHEECCEEEEEECCCCCCCCCCCEE
T ss_conf             38998138721127984899992744489-------98999954670889998889900221999989998787788879


Q ss_pred             EEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             79999957997654111134479
Q 002476          432 FLLYMSLDGHKPISQVLNFEYRS  454 (917)
Q Consensus       432 V~l~v~~~n~~~~se~~~Feyr~  454 (917)
                      |.+++.-.+...+|++..|+|.+
T Consensus        77 V~i~l~r~sd~~~Sep~~F~Y~P   99 (100)
T d1gjia1          77 VKMQLRRPSDQEVSEPMDFRYLP   99 (100)
T ss_dssp             EEEEEEEGGGTEECCCEEEEEEC
T ss_pred             EEEEEEECCCCCCCCCCCEEECC
T ss_conf             99999989999614874638769


No 53 
>d1my7a_ b.1.18.1 (A:) p65 subunit of NF-kappa B (NFKB), dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.32  E-value=0.71  Score=19.86  Aligned_cols=84  Identities=12%  Similarity=0.097  Sum_probs=59.8

Q ss_pred             CEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECC------CCC-CEEECCCCEEEEECCCC------CCCE
Q ss_conf             0358733898668997489998778887333788646998099------003-20301067037738999------9962
Q 002476          365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE------VRV-PAEFVQAGVYRCFLPPH------SPGL  431 (917)
Q Consensus       365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~------~~V-pa~~i~~gvlrC~~Pph------~~G~  431 (917)
                      ..|..+|-.-|+..||.||.|+|..+..      -...+.|-+      ..+ ++.+.....|+|-+||=      .|=.
T Consensus         4 L~I~r~s~~s~sv~GG~Ei~Llc~kv~k------ddi~V~F~E~~WE~~g~f~~~dvh~Q~aIvfktPpY~~~~I~~pV~   77 (107)
T d1my7a_           4 LKICRVNRRSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVR   77 (107)
T ss_dssp             CCEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEETTEEEECBCCGGGBCTTSEEEEECCCCSCTTCCSCEE
T ss_pred             CEEEECCCCCEECCCCCEEEEEECCCCC------CCCEEEEECCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCCCCEE
T ss_conf             5899824772011899679999454366------8879999635828975718888314428999899988876798779


Q ss_pred             EEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             79999957997654111134479
Q 002476          432 FLLYMSLDGHKPISQVLNFEYRS  454 (917)
Q Consensus       432 V~l~v~~~n~~~~se~~~Feyr~  454 (917)
                      |.+++.-.+.-.+|+...|+|.+
T Consensus        78 V~i~l~r~sd~~~Sep~~F~Y~P  100 (107)
T d1my7a_          78 VSMQLRRPSDRELSEPMEFQYLP  100 (107)
T ss_dssp             EEEEEEETTTTEECCCEEEEEEC
T ss_pred             EEEEEEECCCCCCCCCCCEEEEC
T ss_conf             99999979999706881738868


No 54 
>d1u36a_ b.1.18.1 (A:) p50 subunit of NF-kappa B transcription factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.90  E-value=0.74  Score=19.72  Aligned_cols=83  Identities=11%  Similarity=0.089  Sum_probs=59.7

Q ss_pred             CEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE-------------CCCCCCEEECCCCEEEEECCCC----
Q ss_conf             03587338986689974899987788873337886469980-------------9900320301067037738999----
Q 002476          365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-------------GEVRVPAEFVQAGVYRCFLPPH----  427 (917)
Q Consensus       365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~F-------------G~~~Vpa~~i~~gvlrC~~Pph----  427 (917)
                      ..|...|=.-|+..||.+|.|+|..+..      -...+.|             |++ -++.+.+...|+|-+||=    
T Consensus         2 L~I~r~s~~s~sv~GG~Ev~Ll~~kv~K------~di~V~F~e~~~~~~~WE~~~~f-~~~dvh~Q~aIvf~tPpY~~~~   74 (104)
T d1u36a_           2 LKIVRMDRTAGCVTGGEEIWLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDF-SPTDVHRQFAICFKTPKYKDVN   74 (104)
T ss_dssp             CCEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEECC----CEEEECBC-CGGGEETTTEEEEECCCCSCTT
T ss_pred             CEEEEECCCCEECCCCCEEEEEECCCCC------CCEEEEEEEECCCCCCEEEEEEE-CHHHCCCCEEEEEECCCCCCCC
T ss_conf             7899961870412798689999787688------98599999927999805998898-8355312318999899977876


Q ss_pred             --CCCEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             --996279999957997654111134479
Q 002476          428 --SPGLFLLYMSLDGHKPISQVLNFEYRS  454 (917)
Q Consensus       428 --~~G~V~l~v~~~n~~~~se~~~Feyr~  454 (917)
                        .|=.|.+++.....-.+|+...|+|.+
T Consensus        75 I~~pV~V~i~l~r~sd~~~Sep~~F~Y~P  103 (104)
T d1u36a_          75 ITKPASVFVQLRRKSDLETSEPKPFLYYP  103 (104)
T ss_dssp             CSSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred             CCCCEEEEEEEEECCCCCCCCCCCEEECC
T ss_conf             68867999999959998715882758758


No 55 
>d1a3qa1 b.1.18.1 (A:227-327) p52 subunit of NF-kappa B (NFKB) {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.92  E-value=1.1  Score=18.26  Aligned_cols=83  Identities=12%  Similarity=0.145  Sum_probs=58.4

Q ss_pred             CEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE-----------CCCCCCEEECCCCEEEEECCCC------
Q ss_conf             03587338986689974899987788873337886469980-----------9900320301067037738999------
Q 002476          365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-----------GEVRVPAEFVQAGVYRCFLPPH------  427 (917)
Q Consensus       365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~F-----------G~~~Vpa~~i~~gvlrC~~Pph------  427 (917)
                      ..|...|=.-|+..||.||.|+|..+..      -...+.|           |++ -++.+-+...++|-+||=      
T Consensus         2 L~I~r~s~~s~~v~GG~Ei~Ll~~kv~K------ddikV~F~E~~~~~WE~~~~f-~~~dvh~q~aIvfktPpY~~~~I~   74 (101)
T d1a3qa1           2 LKISRMDKTAGSVRGGDEVYLLCDKVQK------DDIEVRFYEDDENGWQAFGDF-SPTDVHKQYAIVFRTPPYHKMKIE   74 (101)
T ss_dssp             CCEEEESCSEEETTCCCEEEEEESSCCT------TTEEEEEEECSSSCEEEECBC-CGGGEETTTEEEEECCCCSCTTCS
T ss_pred             CEEEEECCCCEECCCCCEEEEEECCCCC------CCCEEEEEECCCCCCEEEEEE-CHHHCCCCEEEEEECCCCCCCCCC
T ss_conf             7899831871113898689999675687------888999885599997897582-989901433999989998886568


Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             996279999957997654111134479
Q 002476          428 SPGLFLLYMSLDGHKPISQVLNFEYRS  454 (917)
Q Consensus       428 ~~G~V~l~v~~~n~~~~se~~~Feyr~  454 (917)
                      .|=.|.+++.-.+.-.+|+...|+|.+
T Consensus        75 ~pV~V~i~l~r~sd~~~Sep~~F~Y~P  101 (101)
T d1a3qa1          75 RPVTVFLQLKRKRGGDVSDSKQFTYYP  101 (101)
T ss_dssp             SCEEEEEEEEETTTCCBCCCEEEEEEC
T ss_pred             CCEEEEEEEEECCCCCCCCCCCEEECC
T ss_conf             867999999989999706884638769


No 56 
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=62.82  E-value=2.3  Score=15.21  Aligned_cols=28  Identities=21%  Similarity=0.509  Sum_probs=23.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999886599999999999
Q 002476          868 EERVERSVVRVQSMFRSKKAQEEYRRMK  895 (917)
Q Consensus       868 e~r~~~AvirIQs~~R~~~aR~qy~rlk  895 (917)
                      ++.+.+++++||++||++.+|+.|.++|
T Consensus       702 ~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         702 ADKLRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999999999861


No 57 
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=33.93  E-value=5.9  Score=11.65  Aligned_cols=31  Identities=29%  Similarity=0.526  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999799999999887
Q 002476          783 RKEFLNMRRQAIKIQAAFRGFQVRKQYGKIL  813 (917)
Q Consensus       783 Rk~~~~~r~aav~IQa~~Rg~~~Rk~y~~~~  813 (917)
                      +.+-..+..++++||++||||++||+|++++
T Consensus       699 ~~r~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         699 KIRADKLRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999999999999861


Done!