BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002477
(917 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/869 (51%), Positives = 597/869 (68%), Gaps = 53/869 (6%)
Query: 20 LLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPI 79
++RN FS+K W RY+ K+ AP + +YERALK LP SYKLW+ YL R + VK+ +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
T P YE +NN ERA V MHKMPR+W+ Y + L Q +T RRTFDRAL ALP+TQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLND 199
IW +YLRF+ +P ET++R YRR+LK P E++IE+L S EAA+RLA+V+ND
Sbjct: 148 IWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND 206
Query: 200 DQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYY 259
++F S GK+ ++LW ELCDL++ + ++ LNVDAIIRGG+ +FTD++G+LW SLADYY
Sbjct: 207 ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY 266
Query: 260 IRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
IR FEKARD++EE + TV+TVRDF+ +FDSY+QFEE M++AKM E E
Sbjct: 267 IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKM----------ETASE 316
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
G E++D+ D++LRLAR E L++RRP L NSVLLR
Sbjct: 317 LGREEEDDV-------------------------DLELRLARFEQLISRRPLLLNSVLLR 351
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDI 439
QNPH+V +WH+RV + +G P + I TYTEAV+TVDP KA GKPHTLWVAFAK YE +
Sbjct: 352 QNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQL 411
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
+ARVI +KA +VN+K VD LAS+WC+ E+ELRH+N+ AL+L+R+ATA P+ RR
Sbjct: 412 DDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPA---RRAE 468
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLL 559
DG+EPVQ +++KSL++W+ DLEESLG +ST+AVY+RILDLRIATPQI+INYA+ L
Sbjct: 469 YFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL 528
Query: 560 EEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAP 619
EEHKYFE++F+ YERG+ +FK+P+V DIW TYL+KF+ RYG KLERAR+LFE A++ P
Sbjct: 529 EEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCP 588
Query: 620 ADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKT 679
K LYL YA+LEE++GLA+ AM VYD+AT+AV ++ M+ IYI RAAEI+GV T
Sbjct: 589 PKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHT 648
Query: 680 REIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRW 739
R IY++AIE L D+ + MCL++A++E LGEIDRAR IY F SQ DPR+ FW W
Sbjct: 649 RGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTW 707
Query: 740 HEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL-MQKDQRLSIDDAKDKLKQAG 797
+FEV HGNEDT REMLRI+RSV A+Y +Q +F+ + L + ++ D Q+G
Sbjct: 708 KDFEVRHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAP--GQSG 765
Query: 798 VHEDEMAALER---QLAPAANNGNAKDSSRKVGFVSAGVESQTDGGIKTTANHEDIELPD 854
+ D+M LE+ QLA A + K+ FV + + + AN E+I+L +
Sbjct: 766 M--DDMKLLEQRAEQLAAEAERDQPPRAQSKIFFVRSDASREELAELAQQANPEEIQLGE 823
Query: 855 ESDSEEE----EKVEIAQKDVPSAVYGGL 879
+ D +E +V + Q+ VP+AV+G L
Sbjct: 824 DEDEDEMDLEPNEVRLEQQSVPAAVFGSL 852
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/869 (51%), Positives = 597/869 (68%), Gaps = 53/869 (6%)
Query: 20 LLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPI 79
++RN FS+K W RY+ K+ AP + +YERALK LP SYKLW+ YL R + VK+ +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
T P YE +NN ERA V MHKMPR+W+ Y + L Q +T RRTFDRAL ALP+TQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLND 199
IW +YLRF+ +P ET++R YRR+LK P E++IE+L S EAA+RLA+V+ND
Sbjct: 148 IWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND 206
Query: 200 DQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYY 259
++F S GK+ ++LW ELCDL++ + ++ LNVDAIIRGG+ +FTD++G+LW SLADYY
Sbjct: 207 ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY 266
Query: 260 IRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
IR FEKARD++EE + TV+TVRDF+ +FDSY+QFEE M++AKM E E
Sbjct: 267 IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKM----------ETASE 316
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
G E++D+ D++LRLAR E L++RRP L NSVLLR
Sbjct: 317 LGREEEDDV-------------------------DLELRLARFEQLISRRPLLLNSVLLR 351
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDI 439
QNPH+V +WH+RV + +G P + I TYTEAV+TVDP KA GKPHTLWVAFAK YE +
Sbjct: 352 QNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQL 411
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
+ARVI +KA +VN+K VD LAS+WC+ E+ELRH+N+ AL+L+R+ATA P+ RR
Sbjct: 412 DDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLLRKATALPA---RRAE 468
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLL 559
DG+EPVQ +++KSL++W+ DLEESLG +ST+AVY+RILDLRIATPQI+INYA+ L
Sbjct: 469 YFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL 528
Query: 560 EEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAP 619
EEHKYFE++F+ YERG+ +FK+P+V DIW TYL+KF+ RYG KLERAR+LFE A++ P
Sbjct: 529 EEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCP 588
Query: 620 ADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKT 679
K LYL YA+LEE++GLA+ AM VYD+AT+AV ++ M+ IYI RAAEI+GV T
Sbjct: 589 PKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHT 648
Query: 680 REIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRW 739
R IY++AIE L D+ + MCL++A++E LGEIDRAR IY F SQ DPR+ FW W
Sbjct: 649 RGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTW 707
Query: 740 HEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL-MQKDQRLSIDDAKDKLKQAG 797
+FEV HGNEDT REMLRI+RSV A+Y +Q +F+ + L + ++ D Q+G
Sbjct: 708 KDFEVRHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAP--GQSG 765
Query: 798 VHEDEMAALER---QLAPAANNGNAKDSSRKVGFVSAGVESQTDGGIKTTANHEDIELPD 854
+ D+M LE+ QLA A + K+ FV + + + AN E+I+L +
Sbjct: 766 M--DDMKLLEQRAEQLAAEAERDQPPRAQSKIFFVRSDASREELAELAQQANPEEIQLGE 823
Query: 855 ESDSEEE----EKVEIAQKDVPSAVYGGL 879
+ D +E +V + Q+ VP+AV+G L
Sbjct: 824 DEDEDEMDLEPNEVRLEQQSVPAAVFGSL 852
>sp|Q9HCS7|SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2
Length = 855
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/869 (50%), Positives = 595/869 (68%), Gaps = 53/869 (6%)
Query: 20 LLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLPI 79
++RN FS+K W RY+ K+ AP + +YERALK LP SYKLW+ YL R + VK+ +
Sbjct: 28 IMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCV 87
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
T P YE +NN ERA V MHKMPR+W+ Y + L Q +T RRTFDRAL ALP+TQH R
Sbjct: 88 TDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSR 147
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLND 199
IW +YLRF+ +P ET++R YRR+LK P E++IE+L S EAA+RLA+V+ND
Sbjct: 148 IWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND 206
Query: 200 DQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYY 259
++F S GK+ ++LW ELCDL++ + ++ LNVDAIIRGG+ +FTD++G+LW SLADYY
Sbjct: 207 ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY 266
Query: 260 IRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEE 319
IR FEKARD++EE + TV+TVRDF+ +FDSY+QFEE M++AKM E E
Sbjct: 267 IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKM----------ETASE 316
Query: 320 HGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLR 379
G E++D+ D++LRLAR E L++RRP L NSVLLR
Sbjct: 317 LGREEEDDV-------------------------DLELRLARFEQLISRRPLLLNSVLLR 351
Query: 380 QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDI 439
QNPH+V +WH+RV + +G P + I TYTEAV+TVDP KA GKPHTLWVAFAK YE +
Sbjct: 352 QNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQL 411
Query: 440 ANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRV 499
+ARVI +KA +VN+K VD LAS+WC+ E+ELRH+N+ AL L+R+ATA P+ RR
Sbjct: 412 DDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPA---RRAE 468
Query: 500 AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLL 559
DG+EPVQ +++KSL++W+ DLEESLG +ST+AVY+RILDLRIATPQI+INYA+ L
Sbjct: 469 YFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFL 528
Query: 560 EEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAP 619
EEHKYFE++F+ YERG+ +FK+P+V DIW TYL+KF+ RYG KLERAR+LFE A++ P
Sbjct: 529 EEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCP 588
Query: 620 ADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKT 679
K LYL YA+LEE++GLA+ AM VY++AT+AV ++ M+ IYI RAAEI+GV T
Sbjct: 589 PKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHT 648
Query: 680 REIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRW 739
R IY++AIE L D+ + MCL++A++E LGEIDRAR IY F SQ DPR+ FW W
Sbjct: 649 RGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTW 707
Query: 740 HEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL-MQKDQRLSIDDAKDKLKQAG 797
+FEV HGNEDT +EMLRI+RSV A+Y +Q +F+ + L + ++ D Q+G
Sbjct: 708 KDFEVRHGNEDTIKEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAP--GQSG 765
Query: 798 VHEDEMAALER---QLAPAANNGNAKDSSRKVGFVSAGVESQTDGGIKTTANHEDIELPD 854
+ D+M LE+ QLA A + K+ FV + + + N E+I+L +
Sbjct: 766 M--DDMKLLEQRAEQLAAEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGE 823
Query: 855 ESDSEEE----EKVEIAQKDVPSAVYGGL 879
+ D +E +V + Q+ VP+AV+G L
Sbjct: 824 DEDEDEMDLEPNEVRLEQQSVPAAVFGSL 852
>sp|Q54Z08|SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2
PE=3 SV=1
Length = 850
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/762 (47%), Positives = 530/762 (69%), Gaps = 45/762 (5%)
Query: 9 PSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLI 68
PS DDL YEE++ +NP+S+ W RYL K+ +P K+R IYERA++ LP SYK+WH YL+
Sbjct: 27 PSIDDLPYEEDVSKNPYSVNCWLRYLEFKQGSPQKQRNYIYERAIRELPRSYKIWHQYLL 86
Query: 69 ERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRA 128
ER ++ I +E +N FER+LV + KMPRIWI Y E L Q+ IT R+TFDRA
Sbjct: 87 ERTLAIRGKCILENSFEAVNTLFERSLVFLDKMPRIWIEYCEFLMIQEKITLTRKTFDRA 146
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQE 188
L ALPVTQH RIW Y +F+ + IP T +RVY+RYLK P +E++IE+L+K K WQE
Sbjct: 147 LIALPVTQHYRIWNEYTKFILKRSIPSLTCIRVYKRYLKIQPEKVEEYIEYLIKIKEWQE 206
Query: 189 AAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV 248
+L +L++ +F SIKGK++H WL+LC++L+++ +I+G++VD++IR GI KF+D++
Sbjct: 207 VVNQLIKLLDNVKFKSIKGKSRHDHWLQLCEILSSYPKQITGVDVDSVIRSGIGKFSDQI 266
Query: 249 GRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPD 308
G+LW L+DYYI+ FEKARDIFEE + +V T RDFS I++SY+QFE+ +++AK
Sbjct: 267 GKLWCYLSDYYIQLAQFEKARDIFEEALTSVGTARDFSFIWESYTQFEDSLIAAKQ---- 322
Query: 309 LSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNR 368
+ EE+ E++ + EF D+ + R E+L+ R
Sbjct: 323 -EILEEDPSEDN---------------LLEF----------------DIIIERYENLIQR 350
Query: 369 RPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQ----ILTYTEAVRTVDPMKAVGKPHT 424
+P L NSV+L+QNP+NV++W +RV ++ NPT I T+T++++++DP A GK T
Sbjct: 351 QPLLLNSVMLKQNPNNVQEWLKRVNLY-SNPTPNVKMIIQTFTDSIKSIDPQLAKGKLST 409
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
++ FA YE ++ AR+IF+ ++ VN+KT+D L++++C++AEMEL+H+N++ A+E++
Sbjct: 410 IYSTFAHFYEQNNKLSQARLIFENSLTVNFKTIDDLSTLYCDYAEMELKHRNYEKAIEIL 469
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
+R T P ++ + NEPVQ +L KS+++WTFYVDLEES G +T+++YE+++ L
Sbjct: 470 KRGTVSPK---KQNTIIEENEPVQKRLFKSIKIWTFYVDLEESFGTFHNTKSIYEKMIQL 526
Query: 545 RIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKL 604
++ TPQII+N+A LEE+KYFED F+ YE GV++F +PHV+DIW+TYL+KF++RY KL
Sbjct: 527 KVVTPQIILNFAKYLEENKYFEDMFKAYEHGVQLFLFPHVQDIWITYLTKFIQRYAGMKL 586
Query: 605 ERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYE 664
ER R+LFE + P YL YA EE YGLA+ +M VYD+A K+V ++ MY
Sbjct: 587 ERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYGLARHSMAVYDRAAKSVDKEDRFKMYL 646
Query: 665 IYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFAS 724
+YI RA+E FGV +TREI+ +AIE LPD+ V+ MCLK+A++EK GEIDRAR IY+ S
Sbjct: 647 LYIHRASEFFGVNQTREIFSKAIEQ-LPDQYVRDMCLKFADMEKKYGEIDRARSIYIHGS 705
Query: 725 QFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY 766
QF+DPR+ +WN W +FE HGNEDTF+EMLRI+RSV ASY
Sbjct: 706 QFSDPRTSMFYWNTWSDFEKLHGNEDTFKEMLRIRRSVQASY 747
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/866 (45%), Positives = 544/866 (62%), Gaps = 72/866 (8%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAK-REAPFKKRFVIYERALKALPGSYKLWHAYLI 68
SE+D YE++++RNP S K W Y+ K ++ +++ I ERA LP SYKLW YL
Sbjct: 18 SEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKLWKMYLR 77
Query: 69 ERLSIVK--NLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFD 126
R V N I EY+ +N+ FERAL+ ++KMPRIW MYL+ L Q +T RRTFD
Sbjct: 78 FRTKHVSKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYLKFLMQQPLVTHTRRTFD 137
Query: 127 RALCALPVTQHDRIWEIYLRFVEQ-EGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKL 185
RAL ALP+TQH+RIW +Y F EG ET+++++RRY++ P EDFIE LV L
Sbjct: 138 RALRALPITQHNRIWALYRPFANSAEG---ETAVKIWRRYMQVHPEDAEDFIELLVAVGL 194
Query: 186 WQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEI-----SGLNVDAIIRGG 240
+ EA + +LN+ +F S K + LW E+ DLL HAT + +G++V+ IIR G
Sbjct: 195 YTEAVHKYIEILNNPRFTSKNSKGHYELWSEMVDLLVEHATAVETGHETGIDVERIIRSG 254
Query: 241 IRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMV 300
I +F D+ G+LW LA Y+IRR FE+ARD+FEEG+ TV+TVRDF+++FDSY++FEE ++
Sbjct: 255 IERFADQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYTEFEESII 314
Query: 301 SAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLA 360
SA M E+ E DE +A+F D+D+R+
Sbjct: 315 SALMEMASTRAEKGEVDE-----------------VADF--------------DLDIRMM 343
Query: 361 RLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVG 420
R EHLM+RRP L N VLLRQNP+NV +W +RV ++ N + + TY +A+ + P KAVG
Sbjct: 344 RFEHLMDRRPFLLNDVLLRQNPNNVTEWEKRVALWGDNKEEVVKTYLDAIEAIQPKKAVG 403
Query: 421 KPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
H LW +AK YE D+++AR I +KAV+V YK+V LA +W EWAEMELR++ F A
Sbjct: 404 ALHQLWTNYAKFYEAGGDLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEA 463
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPV--QMKLHKSLRLWTFYVDLEESLGNLESTRAVY 538
+++M +A P +R +E + Q ++HKS +LW+FYVDL ES+ +L+ TR VY
Sbjct: 464 MKVMAKAVQAP----KRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVY 519
Query: 539 ERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKR 598
ERI +LRIATPQ ++NYA LLEEHKYFE++F++YERG+ +F YP ++W YL+K V R
Sbjct: 520 ERIFELRIATPQTVVNYANLLEEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDR 579
Query: 599 YGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHE 658
K +ER R+LFE AVE P K +YL Y LEE+ GLA+ AM++Y++AT+AV + +
Sbjct: 580 --KISIERLRDLFEQAVEDCPPKFAKVIYLMYGNLEEERGLARHAMRIYERATRAVADED 637
Query: 659 KLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARG 718
+ M+ YI ++A FG+P TR IYE+AI + LPD + + MCLK+A++EK LGEIDRAR
Sbjct: 638 RADMFNFYITKSASNFGLPSTRPIYERAI-AALPDAEARDMCLKFADMEKRLGEIDRARA 696
Query: 719 IYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL 777
IY ASQF DPR++ FW +W +FEV HGNEDT++EMLRIKRSV A Y + +FI + L
Sbjct: 697 IYGHASQFCDPRTNPGFWTKWDQFEVQHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQAL 756
Query: 778 MQKDQRLSIDDAKDKLKQAGVHE--DEMAALERQL-APAANNGNAKDSSRKVGFVSAGVE 834
+ Q+ ++A E D MA LERQ AP VGFV+A
Sbjct: 757 ARSQQKRMEEEAAGNGGGEMDAEVADAMAQLERQARAP-------------VGFVAA--- 800
Query: 835 SQTDGGIKTTANHEDIELPDESDSEE 860
S+ G ++ PD D +E
Sbjct: 801 SEGPKGGSMPVQPVEVHNPDAIDLDE 826
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/847 (45%), Positives = 542/847 (63%), Gaps = 70/847 (8%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKRE--APFKKRFVIYERALKALPGSYKLWHAYL 67
++ D +YE++L R P S+K W Y+ K++ +++ FV+ ERA K LP SYKLW YL
Sbjct: 15 ADQDTVYEQDLFRAPGSIKPWLAYIEYKQQNGTLYEQAFVM-ERACKQLPRSYKLWKMYL 73
Query: 68 IERLSIVKNLPIT--HPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTF 125
R++ ++ T EY+ +N FERAL+ ++KMP+IW MYL L Q +T+ RRTF
Sbjct: 74 EFRINHLRGRNATKYRAEYQKVNALFERALILLNKMPKIWEMYLSFLLQQPLVTQTRRTF 133
Query: 126 DRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKL 185
DRAL ALP+TQH+RIW++Y F +T+++++ RY++ P + ED+IE LV+
Sbjct: 134 DRALRALPITQHNRIWKLYKAFARSASG--QTAVKIWARYMQIHPENAEDYIELLVELGQ 191
Query: 186 WQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEIS-----GLNVDAIIRGG 240
+ EA +R +L+D +F S KGK+ +LW E+ DLL + A +I G++VDAI+R G
Sbjct: 192 YTEAVKRYMEILDDPRFQSKKGKSNFQLWTEMVDLLVSKAKQIRTGPQVGIDVDAILRSG 251
Query: 241 IRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMV 300
I +F D+ G+LW LA Y+I + FEKARD+FEEG+ TV+TVRDF++IFD+Y +FEE ++
Sbjct: 252 IDRFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRDFTLIFDAYVEFEESII 311
Query: 301 SAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLA 360
+ M + ++ DE+ A+F D+DLR+
Sbjct: 312 GSLMEAAAVRADKGNVDED-----------------ADF--------------DLDLRML 340
Query: 361 RLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVG 420
R E LM+RRP L N VLLRQNP+NV +W +RV ++ N + + TYT A+ ++P KA G
Sbjct: 341 RFEQLMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNKEEIVNTYTAAIAAINPKKAHG 400
Query: 421 KPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
K LWV +AK YE+ D+ ARVIFDKAV+V +K+V LA WCEWAEMELR +NF A
Sbjct: 401 KFSELWVNYAKFYESGGDLDTARVIFDKAVKVPFKSVAELADTWCEWAEMELRSENFDKA 460
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
+++M +AT P D Q ++HKS +LW+FYVDL ES+ LE TR VYER
Sbjct: 461 VDIMAKATQAPKKSTVDYF--DETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYER 518
Query: 541 ILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYG 600
I +LRIATPQ ++NYA LLEEHKYFED+F+VYERG+ +F YP ++W YL+K V R
Sbjct: 519 IFELRIATPQTVVNYANLLEEHKYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDR-- 576
Query: 601 KTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKL 660
K +ER R+LFE A++ P KPLYL Y LEE+ GLA+ AM++Y++AT+AV + ++
Sbjct: 577 KIGIERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRF 636
Query: 661 GMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIY 720
M+E YI ++A FG+ TR IYE+AI + LPD++ K MCLK+A++E+ LGEIDRAR IY
Sbjct: 637 EMFEFYITKSASNFGLTSTRPIYERAI-AALPDQEAKEMCLKFADMERRLGEIDRARAIY 695
Query: 721 VFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYLMQ 779
ASQF DPR++ FW +W FEV HGNEDTF+EMLRIKRSV A Y + +FI + + +
Sbjct: 696 GHASQFCDPRTNAGFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIAR 755
Query: 780 KDQRLSIDDAKDKLKQAGV-----HEDEMAALERQL-APAANNGNAKDSSRKVGFVSAGV 833
QR + + ++AG D MAALERQ AP +GFV+A
Sbjct: 756 SQQRAQEGAREREGEEAGTDASKERADAMAALERQARAP-------------IGFVAAS- 801
Query: 834 ESQTDGG 840
+ +GG
Sbjct: 802 -TGPEGG 807
>sp|Q5BH69|SYF1_EMENI Pre-mRNA-splicing factor syf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=syf1
PE=3 SV=1
Length = 851
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/888 (43%), Positives = 550/888 (61%), Gaps = 89/888 (10%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKR------EAPFKKR------------FVIYER 51
+++D +YE++LLRNP ++K W Y+ K+ E F R F + ER
Sbjct: 15 ADNDSVYEQDLLRNPGTIKPWLAYIEYKQQNGTLYEQAFVGRPLDALIISILNDFQVMER 74
Query: 52 ALKALPGSYKLWHAYLIERLSIVKNLPIT--HPEYETLNNTFERALVTMHKMPRIWIMYL 109
A K LP SYKLW YL R +KN E++ +N FERAL+ ++KMPRIW MYL
Sbjct: 75 ACKQLPRSYKLWKMYLEFRTKHLKNRNAIKYRAEFQKVNTLFERALILLNKMPRIWEMYL 134
Query: 110 ETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYD 169
+ Q +T+ RRTFDRAL ALPVTQH+RIW++Y F +T+++++ RY++
Sbjct: 135 TFMLQQPLVTQTRRTFDRALRALPVTQHNRIWKLYKTFARSASG--QTAVKIWARYMQIH 192
Query: 170 PSHIEDFIEFLVKSKLWQEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEI- 228
P + E++I LV+ + +A +R +L++ +F S +GK+ +LW E+ DLL + A +I
Sbjct: 193 PENAEEYINLLVEMGHYTDAIKRYMEILDNPRFQSREGKSNFQLWTEMVDLLVSKAKKIE 252
Query: 229 ----SGLNVDAIIRGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRD 284
+G++VDAI+R GI +F D+ G+LW LA Y+I + FEKARD+FEEG+ TV+TVRD
Sbjct: 253 TGPQTGIDVDAILRSGIDRFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRD 312
Query: 285 FSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVL 344
F++IFDSY +FEE ++ + M + + + DEE A+F
Sbjct: 313 FTLIFDSYVEFEESIIGSLMEAAAVRADNGKADEE-----------------ADF----- 350
Query: 345 NGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQIL 404
D+DLR+ R E LM+RRP L N VLLRQNP+NV +W +RV ++ N + +
Sbjct: 351 ---------DLDLRMLRFEQLMDRRPFLVNDVLLRQNPNNVIEWEKRVALWGDNNVEIVN 401
Query: 405 TYTEAVRTVDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIW 464
TYT A+ ++P KAVGK LWV +AK YE D+ AR+IF+KAV+V +K+V+ LA W
Sbjct: 402 TYTAAIAAINPKKAVGKFSELWVNYAKFYERGGDLDTARIIFEKAVKVPFKSVNELAETW 461
Query: 465 CEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDL 524
CEWAEMELR +NF A+E+M +AT P D Q ++HKS +LW+FYVDL
Sbjct: 462 CEWAEMELRSENFDKAVEIMAKATQAPKKSTVDYF--DETLSPQQRIHKSWKLWSFYVDL 519
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHV 584
ES+ ++E T+ VYERI +LRIATPQ ++NYA LLEEHKYFE++F+VYERG+ +F YP
Sbjct: 520 VESVSSIEETKKVYERIFELRIATPQTVVNYANLLEEHKYFEESFKVYERGLDLFTYPVA 579
Query: 585 KDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAM 644
++W YL+K V R K +ER R+LFE A++ P +PLYL Y LEE+ GLA+ AM
Sbjct: 580 FELWNLYLTKAVDR--KIGIERLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARHAM 637
Query: 645 KVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYA 704
++Y++AT+AV + ++ M+E YI ++A FG+P TR IYE+AI + LPD + K MCLK+A
Sbjct: 638 RIYERATRAVSDEDRFEMFEFYITKSASNFGLPSTRPIYERAI-AALPDHEAKEMCLKFA 696
Query: 705 ELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSA 764
E+E+ LGEIDRAR IY ASQF DPR++ FW +W FEV HGNEDTF+EMLRIKRSV A
Sbjct: 697 EMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQA 756
Query: 765 SY-SQTHFILPEYLMQKDQRLSIDDAKDKLKQAGVH---EDEMAALERQL-APAANNGNA 819
Y + +FI + + + QR + + + D MAALERQ AP
Sbjct: 757 QYNTDVNFIASQAIARSQQRAPEGEEATAAAEREMDTETTDAMAALERQARAP------- 809
Query: 820 KDSSRKVGFVSAGVESQ--------TDGGIKTTANHEDIELPDESDSE 859
+GFV+A + G + AN + I+L D+ +++
Sbjct: 810 ------IGFVAASTGPEGGNRAPPAGQGPVAAPANPDAIDLDDDMEAD 851
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/847 (45%), Positives = 533/847 (62%), Gaps = 73/847 (8%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAK-REAPFKKRFVIYERALKALPGSYKLWHAYLI 68
++DD +YE+++ R+P S K W Y+ K + +++ + ERA LP SYKLW YL
Sbjct: 21 TDDDFVYEQDIQRSPGSTKPWLAYISYKIQHGTVEEQAFVLERACMQLPRSYKLWKMYLT 80
Query: 69 ERLSIVK--NLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFD 126
R + N I EY +N+ FERAL+ ++KMPRIW MYL+ L Q +T RRTFD
Sbjct: 81 FRTKHIAKLNAAIFAAEYRKVNSLFERALILLNKMPRIWEMYLKFLMKQPLVTLTRRTFD 140
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLW 186
RAL ALP+TQH+RIW +Y F P T+++++RRY++ P EDFIE L + +
Sbjct: 141 RALRALPITQHNRIWALYRPFANSAAGP--TAVKIWRRYMQVHPEDAEDFIELLYQVGYY 198
Query: 187 QEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEI-----SGLNVDAIIRGGI 241
EAA++ VLN+ +F S GK LW E+ +LL HATE+ +G++V+ IIR GI
Sbjct: 199 TEAAKKYIDVLNNPRFTSKHGKGHFELWSEMVELLVEHATEVEAGYETGIDVERIIRSGI 258
Query: 242 RKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVS 301
+F D+ G+LW LA Y+IRR FE+ARD+FEEG+ TV+TVRDF+++FDSY++FEE ++
Sbjct: 259 ERFADQRGKLWVGLATYWIRRGSFERARDVFEEGITTVMTVRDFTLVFDSYAEFEESVIG 318
Query: 302 AKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLAR 361
A M E+ DE A+F D+D+R+ R
Sbjct: 319 AMMEVAGQRAEKGVVDE-----------------AADF--------------DLDIRMMR 347
Query: 362 LEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGK 421
EHLM+RRP L N VLLRQNP+NV +W +RV ++ N + + TYT A+ V P KA G
Sbjct: 348 FEHLMDRRPFLLNDVLLRQNPNNVNEWEKRVALWGDNHNEVVNTYTNAIAAVQPKKASGP 407
Query: 422 PHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGAL 481
H LW +AK YE D+ +AR+I +KAV+V +K+V LA +W EWAEMELR+ NF+ A+
Sbjct: 408 FHQLWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAV 467
Query: 482 ELMRRATAEPSVEVRRRVAADGNEPV--QMKLHKSLRLWTFYVDLEESLGNLESTRAVYE 539
+M +A P +R +E + Q ++HKS +LW+FYVDL ES+G LE T+ VYE
Sbjct: 468 RIMAKAVQAP----KRSTVDYFDETLTPQQRVHKSWKLWSFYVDLVESVGTLEDTKKVYE 523
Query: 540 RILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRY 599
RI +LRIATPQ ++NYA LLEEHKY+E++F++YERG+ +F YP ++W YL+K V R
Sbjct: 524 RIFELRIATPQTVVNYANLLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDR- 582
Query: 600 GKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEK 659
K +ER R+LFE AVE P K +YL Y LEE+ GLA+ AM++Y++AT+AV + ++
Sbjct: 583 -KISIERLRDLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHAMRIYERATRAVSDEDR 641
Query: 660 LGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGI 719
M+ YI ++A FG+P TR+IYE+AI + LPD + + MCLK+A++EK LGEIDRAR I
Sbjct: 642 ADMFNFYITKSASNFGLPSTRQIYERAI-AALPDDEARDMCLKFADMEKRLGEIDRARAI 700
Query: 720 YVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYLM 778
Y ASQF DPR+ FW +W +FEV HGNEDTF+EMLRIKR+V A Y + +FI + L
Sbjct: 701 YGHASQFCDPRTTPAFWTKWEQFEVQHGNEDTFKEMLRIKRAVQAKYNTDVNFIASQALA 760
Query: 779 QKDQRLSIDDAKDKLKQA--GVHEDEMAALERQL-APAANNGNAKDSSRKVGFVSAGVES 835
+ Q+ + + GV D M ALERQ APA GFV+A
Sbjct: 761 RSQQQKQANGHGSGAEDGDDGV-VDAMEALERQARAPA-------------GFVAA---- 802
Query: 836 QTDGGIK 842
T+G IK
Sbjct: 803 -TEGNIK 808
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 166/413 (40%), Gaps = 68/413 (16%)
Query: 516 RLWTFYVDLEESLGNLESTRAVYERILDLRIAT----PQIIINYALLLEEHKYFEDAFRV 571
+LW Y E G+L S R + E+ + + + + I +A + + FE+A R+
Sbjct: 410 QLWANYAKFYERGGDLRSARIIMEKAVKVPFKSVVELADMWIEWAEMELRNDNFEEAVRI 469
Query: 572 YERGVKIFKYPHVK----------------DIWVTYLSKFVKRYGKTKLERARELFENAV 615
+ V+ K V +W Y+ V+ G LE ++++E
Sbjct: 470 MAKAVQAPKRSTVDYFDETLTPQQRVHKSWKLWSFYVD-LVESVGT--LEDTKKVYERIF 526
Query: 616 ETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAE-IF 674
E A + YA L E++ + + K+Y++ ++ +Y+ +A +
Sbjct: 527 ELRIA--TPQTVVNYANLLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDRKI 584
Query: 675 GVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTE 734
+ + R+++EQA+E G P K K + L Y LE+ G A IY A++ +
Sbjct: 585 SIERLRDLFEQAVE-GCPPKFAKIIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRAD 643
Query: 735 FWNRWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQRLSIDDAKDKLK 794
+N + ++ + R++ +R+++A LP+ D+A+D
Sbjct: 644 MFNFYITKSASNFGLPSTRQIY--ERAIAA--------LPD-----------DEARDMCL 682
Query: 795 QAGVHEDEMAALERQLAPAANNGNAKDSSRKV-GFVSAGVESQTDGGIKTTANHEDIELP 853
+ A +E++L D +R + G S + +T T +++
Sbjct: 683 K-------FADMEKRLGEI-------DRARAIYGHASQFCDPRTTPAFWTKWEQFEVQHG 728
Query: 854 DESDSEEEEKVEIA-----QKDVPSAVYGGLARKREGSEEDGDNSADANGKDG 901
+E +E +++ A DV LAR ++ + +G S +G DG
Sbjct: 729 NEDTFKEMLRIKRAVQAKYNTDVNFIASQALARSQQQKQANGHGSGAEDGDDG 781
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/829 (42%), Positives = 516/829 (62%), Gaps = 71/829 (8%)
Query: 12 DDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERL 71
DD +E ELLR+P+SLK W RY+ + +KR +++ERA LPGSYK+W +YL R+
Sbjct: 17 DDEPFELELLRDPYSLKSWLRYIKTHEGSTLEKRVLLFERACSELPGSYKIWKSYLELRV 76
Query: 72 SIVKNL-PITHPE-YETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRAL 129
+ V++L P H E + ++N+ FER+L+ +HKMP IW +YL+ L Q +TK R TF+ AL
Sbjct: 77 AHVEHLNPYFHAEAFASVNDCFERSLILLHKMPVIWKLYLQFLMKQPNVTKIRCTFNSAL 136
Query: 130 CALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEA 189
ALPVTQHD IW+++ ++ E G + VYRRY++ +P IE++IE L K LW EA
Sbjct: 137 RALPVTQHDDIWDMFTKYAEDIGGLF--CIHVYRRYIQVEPRAIENYIEILCKLGLWNEA 194
Query: 190 AERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVG 249
A + +LN F S K K+ +++WLE +L+ H ++V+ + R GI++F+D+ G
Sbjct: 195 ARQYEDILNRPVFLSAKRKSNYQIWLEFSELVVQHPDHTQNIDVEKVFRAGIKRFSDQAG 254
Query: 250 RLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDL 309
+LWT LA YYIR +EKAR F EGM ++TVR+F++IFD++ +FEE +SA++
Sbjct: 255 KLWTYLAQYYIRIGDYEKARSTFYEGMNNIMTVRNFTIIFDAFVEFEEQWLSARV----- 309
Query: 310 SVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRR 369
+ G+A DE LS +D +A LE ++++R
Sbjct: 310 -------EASSGNANDE-------LS-------------------IDFHMAWLEKILDKR 336
Query: 370 PELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAF 429
P N VLLRQN +NV++W RRVK E + K + YT+A++ V+P A G L+ F
Sbjct: 337 PLYINDVLLRQNINNVDEWLRRVKFLEDDSEKVVQVYTDAIKNVNPKLAHGSLGKLFSEF 396
Query: 430 AKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATA 489
A+ YE + D+ +R+IF+KA V YKTV+ LA +W +WAEMELRH+NF A +L+ A
Sbjct: 397 ARFYENFDDLEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAARKLIGDAVH 456
Query: 490 EPSVEVRRRVAADGNEPV--QMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIA 547
P R+ + +E + Q++LHKS ++W +Y+DLEES+G +E+TR +Y+R+ +L+IA
Sbjct: 457 AP----RKSHISFFDESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVFELKIA 512
Query: 548 TPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERA 607
TPQ+++NYA LLEE+ YFED+F++YERGV +F YP ++W YL+KFVKRY T +ER
Sbjct: 513 TPQVVVNYANLLEENAYFEDSFKIYERGVALFSYPVAFELWNLYLTKFVKRYQGTHMERT 572
Query: 608 RELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYI 667
R+LFE A+E P + K +YL YA EE +G AKR++ + ++A V ++L +Y + +
Sbjct: 573 RDLFEQALEGCPPEFSKSIYLLYADFEEKFGKAKRSISILEKAADKVKTADRLAIYNVLL 632
Query: 668 ARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFA 727
+ A +GV TR +YE+AIES L D +VK MCL++AE+E LGEIDRAR IY+ SQ+
Sbjct: 633 VKVALNYGVLATRTVYEKAIES-LSDSEVKDMCLRFAEMETKLGEIDRARLIYIHGSQYC 691
Query: 728 DPRSDTEFWNRWHEFEVNHGN-EDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQRLSI 786
DPR +T++W W EFE+ +GN E+T +EMLRIKRSV +S L I
Sbjct: 692 DPRVETDYWKAWQEFEIRYGNPEETVKEMLRIKRSVQTKFST-------------DSLHI 738
Query: 787 DDAKDKLKQAGVHEDEMAAL--ERQLAPAANNG------NAKDSSRKVG 827
K++ A D M L E+ P A G N +++S+ G
Sbjct: 739 AKRAAKIESAAAPMDPMEQLEMEKSEGPKALAGFVLSKSNPQETSKITG 787
>sp|P0CO08|SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SYF1 PE=3 SV=1
Length = 1031
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/626 (45%), Positives = 400/626 (63%), Gaps = 51/626 (8%)
Query: 231 LNVDAII-RGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIF 289
L+V+ I+ R G++ + D+ GRLWT LA Y+I+R FE+A FE G+ VVT+RDF+ IF
Sbjct: 419 LDVEGIVERDGLQVYKDQAGRLWTGLATYWIKRGEFERATATFERGLAAVVTIRDFTQIF 478
Query: 290 DSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWL 349
D+Y++F E M+S M L+ E+ +DE+ + E E
Sbjct: 479 DAYAEFSETMISTLMDA--LADEDNLEDEDFDAEETE----------------------- 513
Query: 350 HDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEA 409
+++D R+ E LM+RRP L N VLLR+NP+ V +W +R+ + + K + Y +A
Sbjct: 514 ---QELDERMKSFEELMDRRPFLVNDVLLRRNPNEVVEWEKRIALHGDDDAKVVEAYVKA 570
Query: 410 VRTVDPMKAVGKPHTLWVAFAKLYE------------TYKDIANARVIFDKAVQVNYKTV 457
+ T++P KA G + L+V FAK YE D+ AR IF++A +V +K V
Sbjct: 571 LDTINPRKATGPLYPLYVNFAKFYEEGGSKDDNGEPRNEPDLEQARKIFERATKVPFKAV 630
Query: 458 DHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRL 517
D LA +WCEWAEMELR++N++ A+ LM+RAT P + + D N P Q +L KSL+L
Sbjct: 631 DELAEVWCEWAEMELRNENYEEAIRLMQRATTVP--KNTKINYYDDNIPPQSRLFKSLKL 688
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
W++Y DLEES+G +EST+AVY++I++L+IA Q+I+NYA LEE+KYFE++F+VYERG++
Sbjct: 689 WSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYERGIE 748
Query: 578 IFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDY 637
+F +P +IW YLSKFVKRYG KLERAR+LFE A+E P KPLYL YAKLEE++
Sbjct: 749 LFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEH 808
Query: 638 GLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVK 697
GLAKRAM +YD+A V + +K MY IYIA+A FG+P TR IYE+A+ES LPDK
Sbjct: 809 GLAKRAMGIYDRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERALES-LPDKQTA 867
Query: 698 AMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR 757
MC ++A +E+ LGEIDRAR IY ASQF DPR + EFW W++FE+ G+EDTFREMLR
Sbjct: 868 EMCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQEWNDFEIETGSEDTFREMLR 927
Query: 758 IKRSVSASY-SQTHFI-LPEYLMQKDQRLSIDDAKDKLKQAGVHEDEMAALERQLAPAAN 815
IKR+V AS+ ++T FI K D + + + A D MAA+ER+L+ A
Sbjct: 928 IKRAVQASFNTETSFIAAQAAAASKGTEKPTDTSAQEAQDAA---DPMAAMERELSAAGA 984
Query: 816 NGNAKDSSRKVGFVSAGVESQTDGGI 841
+G K + FV++ + GI
Sbjct: 985 DGARKGGA--PAFVASTLNKTNANGI 1008
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 136/305 (44%), Gaps = 85/305 (27%)
Query: 7 LYPSEDDLLYEEELLRNPFSLKLWWRY----------------------------LVAKR 38
L PS D L EE+LL NP +L+ W Y L +K
Sbjct: 29 LIPSAD-LPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLASKN 87
Query: 39 EAPFKKRFV-IYERALKALPGSYKLWHAYLIERLSIV----------------------- 74
+R V IYERA+ P SYKLW AY + R S V
Sbjct: 88 ARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTRQSYVLGELTNDAKEARSQQAKRGAAYK 147
Query: 75 KNL------------------PIT-HPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQ 115
N+ P+ + E+ +L T ER ++ + +P W+++L L
Sbjct: 148 TNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLVATGERMIMCLPNLPIPWLLHLGVLLHP 207
Query: 116 KFIT------KARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYD 169
K + ARR FDRAL LP + H R+W +YLR+ E G + RV+RRYLK D
Sbjct: 208 KCPSVFKNGSYARRAFDRALRTLPPSLHGRVWGLYLRWAEIVG--GDAGERVWRRYLKVD 265
Query: 170 PSHIEDFIEFLVKSKLWQE--AAERLASVLNDDQ---FYSIKGKTKHRLWLELCDLLTTH 224
PS E I +L++++ + AA+ L S+ Q + S++GK+ ++L+++ +L+ +
Sbjct: 266 PSLTERHITYLLEAEEPRPLAAAKYLLSIARRAQQNLYSSLEGKSPYQLFVDFLELVEKY 325
Query: 225 ATEIS 229
A +I
Sbjct: 326 ADQIG 330
>sp|P0CO09|SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SYF1 PE=3 SV=1
Length = 1031
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/626 (45%), Positives = 400/626 (63%), Gaps = 51/626 (8%)
Query: 231 LNVDAII-RGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIF 289
L+V+ I+ R G++ + D+ GRLWT LA Y+I+R FE+A FE G+ VVT+RDF+ IF
Sbjct: 419 LDVEGIVERDGLQVYKDQAGRLWTGLATYWIKRGEFERATATFERGLAAVVTIRDFTQIF 478
Query: 290 DSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWL 349
D+Y++F E M+S M L+ E+ +DE+ + E E
Sbjct: 479 DAYAEFSETMISTLMDA--LADEDNLEDEDFDAEETE----------------------- 513
Query: 350 HDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEA 409
+++D R+ E LM+RRP L N VLLR+NP+ V +W +R+ + + K + Y +A
Sbjct: 514 ---QELDERMKSFEELMDRRPFLVNDVLLRRNPNEVVEWEKRIALHGDDDAKVVEAYVKA 570
Query: 410 VRTVDPMKAVGKPHTLWVAFAKLYE------------TYKDIANARVIFDKAVQVNYKTV 457
+ T++P KA G + L+V FAK YE D+ AR IF++A +V +K V
Sbjct: 571 LDTINPRKATGPLYPLYVNFAKFYEEGGSKDDNGEPRNEPDLEQARKIFERATKVPFKAV 630
Query: 458 DHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRL 517
D LA +WCEWAEMELR++N++ A+ LM+RAT P + + D N P Q +L KSL+L
Sbjct: 631 DELAEVWCEWAEMELRNENYEEAIRLMQRATTVP--KNTKINYYDDNIPPQSRLFKSLKL 688
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
W++Y DLEES+G +EST+AVY++I++L+IA Q+I+NYA LEE+KYFE++F+VYERG++
Sbjct: 689 WSYYSDLEESIGTVESTKAVYDKIMELKIANAQVIVNYATFLEENKYFEESFKVYERGIE 748
Query: 578 IFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDY 637
+F +P +IW YLSKFVKRYG KLERAR+LFE A+E P KPLYL YAKLEE++
Sbjct: 749 LFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEH 808
Query: 638 GLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVK 697
GLAKRAM +YD+A V + +K MY IYIA+A FG+P TR IYE+A+ES LPDK
Sbjct: 809 GLAKRAMGIYDRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERALES-LPDKQTA 867
Query: 698 AMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR 757
MC ++A +E+ LGEIDRAR IY ASQF DPR + EFW W++FE+ G+EDTFREMLR
Sbjct: 868 EMCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQEWNDFEIETGSEDTFREMLR 927
Query: 758 IKRSVSASY-SQTHFI-LPEYLMQKDQRLSIDDAKDKLKQAGVHEDEMAALERQLAPAAN 815
IKR+V AS+ ++T FI K D + + + A D MAA+ER+L+ A
Sbjct: 928 IKRAVQASFNTETSFIAAQAAAASKGTEKPTDTSAQEAQDAA---DPMAAMERELSAAGA 984
Query: 816 NGNAKDSSRKVGFVSAGVESQTDGGI 841
+G K + FV++ + GI
Sbjct: 985 DGARKGGA--PAFVASTLNKTNANGI 1008
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 136/305 (44%), Gaps = 85/305 (27%)
Query: 7 LYPSEDDLLYEEELLRNPFSLKLWWRY----------------------------LVAKR 38
L PS D L EE+LL NP +L+ W Y L +K
Sbjct: 29 LIPSAD-LPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLASKN 87
Query: 39 EAPFKKRFV-IYERALKALPGSYKLWHAYLIERLSIV----------------------- 74
+R V IYERA+ P SYKLW AY + R S V
Sbjct: 88 ARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTRQSYVLGELTNDAKEARSQQAKRGAAYK 147
Query: 75 KNL------------------PIT-HPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQ 115
N+ P+ + E+ +L T ER ++ + +P W+++L L
Sbjct: 148 TNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLVATGERMIMCLPNLPIPWLLHLGVLLHP 207
Query: 116 KFIT------KARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYD 169
K + ARR FDRAL LP + H R+W +YLR+ E G + RV+RRYLK D
Sbjct: 208 KCPSVFKNGSYARRAFDRALRTLPPSLHGRVWGLYLRWAEIVG--GDAGERVWRRYLKVD 265
Query: 170 PSHIEDFIEFLVKSKLWQE--AAERLASVLNDDQ---FYSIKGKTKHRLWLELCDLLTTH 224
PS E I +L++++ + AA+ L S+ Q + S++GK+ ++L+++ +L+ +
Sbjct: 266 PSLTERHITYLLEAEEPRPLAAAKYLLSIARRAQQNLYSSLEGKSPYQLFVDFLELVEKY 325
Query: 225 ATEIS 229
A +I
Sbjct: 326 ADQIG 330
>sp|Q4P7S1|SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SYF1 PE=3 SV=1
Length = 1081
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/572 (47%), Positives = 369/572 (64%), Gaps = 52/572 (9%)
Query: 223 THATEISGLNVDAII-RGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVT 281
T A + + LNV AII + G+ KF+D+ GRLWT LA Y+I+R F+ ARD FE G+ TV T
Sbjct: 438 TDALDPTRLNVTAIIQKDGLDKFSDQSGRLWTGLATYWIKRGEFDVARDTFEAGIQTVKT 497
Query: 282 VRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVK 341
VRDF+ IFD+Y++ E +++ M +E EE G E + + E
Sbjct: 498 VRDFTQIFDAYAETSENVIAFMM---------DELTEEGGDEEADAEDQEETREDKE--- 545
Query: 342 KVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTK 401
++D R+ E L+ RRP L N VLLR+NP +V++W +RV ++ N K
Sbjct: 546 -----------AELDRRMQEFEELIERRPLLVNDVLLRRNPDDVQEWEKRVMLYGDNDEK 594
Query: 402 QILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYE--------------------------T 435
I TY EA++ ++P KA H L++ FA+ YE
Sbjct: 595 IIETYREAIQKINPRKATPNFHQLFLNFAQFYEYGGSAGLAKRMAEGVEGQEEEEQAEQV 654
Query: 436 YKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEV 495
D+ +AR IF+KA+ + ++ VD LA IWCEWAEMELRH N+ A+ M R+ A P
Sbjct: 655 EGDLESARKIFEKAITIPFRRVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPR-NT 713
Query: 496 RRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINY 555
+ D P Q +L KSL+LW+FYVDLEESLG++EST+ VYE++L+L+IA+ QIIINY
Sbjct: 714 KGIQYHDDTLPPQTRLFKSLKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINY 773
Query: 556 ALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAV 615
A LE++KYFE++F+V+ERGV++F YP +IW YLSKFVKRYG KLERAR+LFE A+
Sbjct: 774 AAFLEDNKYFEESFKVFERGVELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQAL 833
Query: 616 ETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFG 675
+ PA KPL L Y +LEE++GL KRAMK+Y++AT+AV ++ MY YIA+AA FG
Sbjct: 834 DKCPARFCKPLMLMYGQLEEEHGLVKRAMKIYERATRAVSTDDRFDMYVFYIAKAAATFG 893
Query: 676 VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEF 735
+ TR IYE+AIES LPD+ MCL++A LE+ LGEIDRAR IY ASQF DPR+ T+F
Sbjct: 894 LAATRPIYERAIES-LPDRQTAEMCLRFAALERKLGEIDRARVIYAHASQFCDPRTQTDF 952
Query: 736 WNRWHEFEVNHGNEDTFREMLRIKRSVSASYS 767
W W++FE+ G+EDTFREMLRIKRSV A ++
Sbjct: 953 WKEWNQFEIETGSEDTFREMLRIKRSVQAQFN 984
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 105/252 (41%), Gaps = 82/252 (32%)
Query: 13 DLLYEEELLRNPFSLKLWWRYL-------VAKREAP-----------------------F 42
D+L E+ELLRNP + + W Y+ V KR P
Sbjct: 60 DILLEQELLRNPDNFRSWSSYIDHIINTNVVKRPPPDVSLTTYQAALLGPLASSTQRTAL 119
Query: 43 KKRFVIYERALKALPGSYKLWHAYLIERLSIVKNLP------------------------ 78
++ IYERAL P Y LW YL R V P
Sbjct: 120 RRLTSIYERALAQFPTRYSLWRDYLQNRSRFVLGDPKGGSDAKRKRDLQAAREKLDFGPT 179
Query: 79 ---------------------ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKF 117
+ E+++L +ERAL+ + MPR+W+ YL +
Sbjct: 180 LIDSVEDEDFGSAYRGGLDGTVGWQEWKSLAALYERALMWLPTMPRLWLSYLSMFIHPQC 239
Query: 118 -----ITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSH 172
T ARRTFDRAL LP + H R+W++YL++ E+ G ET LRV+RRYL+ DPS
Sbjct: 240 PPILSFTHARRTFDRALRTLPGSLHLRVWKVYLKWAERRG--GETCLRVWRRYLRVDPSL 297
Query: 173 IEDFIEFLVKSK 184
E ++ L+ +
Sbjct: 298 TERYVSILLAQR 309
>sp|Q6CAR6|SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SYF1 PE=3 SV=1
Length = 736
Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust.
Identities = 283/756 (37%), Positives = 438/756 (57%), Gaps = 74/756 (9%)
Query: 16 YEEELLRNPFSLKLWWRYL--VAKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSI 73
+E ++ +P ++ W RY+ V + +++ +++ERA+ ALP SYKLW YL R +
Sbjct: 4 HELDIASSPGDVRPWIRYISSVKNDKTTARQKCILFERAVTALPRSYKLWKEYLDFRSGL 63
Query: 74 VKNL-PITHP-EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCA 131
L PI H EY+ +N +E++LV +HKMP IW+ YL+ L Q +TK R + AL +
Sbjct: 64 CTGLNPIKHADEYDRVNALYEKSLVLLHKMPVIWLQYLQFLMLQPKVTKTRSVINEALRS 123
Query: 132 LPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAE 191
LPV QH R+ ++ L+F + G P TS+++++RY+ P E + L+K EAA
Sbjct: 124 LPVQQHPRVLKLALQFGTKVGGP--TSVQIWKRYVLAYPDQKETMAQSLIKMGYHGEAAV 181
Query: 192 RLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRL 251
L +LN + LW EL DL+ V+ II GI++F D+ G L
Sbjct: 182 VLIELLN-------ASGDNYALWTELVDLIGESDKLTLEPPVEQIISSGIKRFPDQRGPL 234
Query: 252 WTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSV 311
LA++ +R E ARD+FE+G+ T TVRDF+V+FD+Y
Sbjct: 235 TVQLANFLVRNGDLESARDVFEDGITTANTVRDFTVVFDAY------------------- 275
Query: 312 EEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPE 371
AEF ++++ ++ DLR+A+L+HL+ RRP
Sbjct: 276 -------------------------AEFEERIVTHLIENESPMADLRIAKLDHLLERRPF 310
Query: 372 LANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLWVAFAK 431
L + V LR+ P++V +W +R+ ++E +P + + YTEAV+++ P KA GK LW+++AK
Sbjct: 311 LISDVRLRREPYSVLEWQKRIALYE-DPAETVAAYTEAVQSIPPAKADGKLSQLWISWAK 369
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP 491
Y +D A I+ KA V YK+V LA ++ W++ E + +++ A++++++A P
Sbjct: 370 FYA--EDRETACEIYHKATLVPYKSVSELADVYLAWSQYESENDHWENAVKIIKQALESP 427
Query: 492 SVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQI 551
+ V + + Q ++HKS+RLW++Y DL ES G E T+ VYE+I+ L + TP
Sbjct: 428 NTHVSYH---NSDLTAQDRIHKSVRLWSYYADLVESYGTFEETKQVYEKIMALDLLTPLF 484
Query: 552 IINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELF 611
++NYA LLEE+ +FE+ F+VYE+G+ +F+ +IW YL K R G LER R+LF
Sbjct: 485 VVNYATLLEENDHFEEMFKVYEKGISLFE-ESAFEIWNLYLVKASPRLG---LERLRDLF 540
Query: 612 ENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAA 671
E+A+ P K LY+ Y KLEED GL + AM+VY V E ++ YI R
Sbjct: 541 EDAISKFPTQ--KALYILYGKLEEDRGLVRNAMRVYSAMCDHVKTSE---TFKYYIGRTV 595
Query: 672 EIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRS 731
E FG+ TR +Y++A+ES LP+KD + L YA++E+ LGEIDRAR IY + SQF+DP+
Sbjct: 596 ENFGLAATRPVYDKALES-LPNKDASELALDYAQMEEKLGEIDRARAIYGYGSQFSDPQI 654
Query: 732 DTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASYS 767
++++ WH+FEV HG EDTF++MLRIKRS+ A ++
Sbjct: 655 -IKYYDAWHKFEVAHGTEDTFKDMLRIKRSIQAQFN 689
>sp|Q6BQ23|SYF1_DEBHA Pre-mRNA-splicing factor SYF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SYF1 PE=3 SV=2
Length = 850
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 261/836 (31%), Positives = 444/836 (53%), Gaps = 120/836 (14%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKRE---APFKKRFVIYERALKALPGSYKLWHAY 66
EDD+ YE+E+ +NP +L W RY K F+ R I ERA+K LP SYKLW Y
Sbjct: 13 CEDDIPYEQEVAKNPNNLSNWLRYYRFKSSTSSCTFQNRVFILERAVKQLPRSYKLWMIY 72
Query: 67 LIERLSIVKNLPITHPEYETL--NNTFERALVTMHKMPRIWIMYLETLT-SQKF-ITKAR 122
+ L V+ + E L N FER+L +++ P +WI YLE L +Q + IT R
Sbjct: 73 IDVVLQEVQTSVSYKSKSEILSVNMVFERSLQLLNRAPILWIKYLEFLVETQPYEITLLR 132
Query: 123 RTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKY-DPSH--------- 172
R F+ L LP++QH IW +Y+RF + G T ++VY +YL+Y +P
Sbjct: 133 RKFNECLYNLPISQHHLIWPLYIRFADDVGGM--TGVKVYLKYLQYANPESLQGLNNEQE 190
Query: 173 ------IEDFIEFLVKSKLWQEAAERLASVL-NDDQFYSIKGKTKHRLWLELCDLLTTHA 225
I+D I LV+ +EA++ +L + D+F + K+ +LW+E DLL
Sbjct: 191 GELGITIDDIISKLVEFGDVKEASKLFQHILQHTDKFIGL-SKSPLQLWIEYIDLLVNSV 249
Query: 226 TEISGLNVD---------AIIRGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGM 276
++ V+ +I+ G++KF D++G+ + L Y+I+R+ KAR F+EG+
Sbjct: 250 SKNKRSTVNYNEFDYFFEKLIKDGLQKFPDQIGKFYLKLTFYFIKRKNLFKARYYFDEGL 309
Query: 277 MTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSM 336
T V+V+DF++IFDSY++FEE +++ K E+ G ED D+
Sbjct: 310 KTCVSVKDFTMIFDSYTEFEENILTNMSEKL----------EKLG--EDSDLN------- 350
Query: 337 AEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFE 396
++DLR+ E L+N RP L N ++LRQ+ +N+++W +++ +++
Sbjct: 351 ----------------NELDLRMNVFEKLINDRPYLLNDMMLRQDVNNLDEWFKKIVLYK 394
Query: 397 GNPTKQIL--TYTEAVRTVDPMKAVGKPH-------TLWVAFAKLYETYKDIANARVIFD 447
+ ++ TY A+RT++P+KA + LW+ +A +Y + D+ A +IF
Sbjct: 395 KDSDINMMLDTYAAALRTINPLKAHSLANKKENTLPNLWINYANVYASQNDVKTANLIFS 454
Query: 448 KAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPV 507
K+V+ +++ D LA+++ EW E+ ++H + K A+E++ E + D + +
Sbjct: 455 KSVKSQFQSPDDLATLYIEWCELFVKHNDDKKAIEIVEDICTS---ERGKFDYNDSSIDI 511
Query: 508 QMKLHKSLRLWTFYVDLEESL-------GNLESTRAVYERILDLRIATPQIIINYALLLE 560
+++ KS++LW+FY+DL ES+ +E Y +DL+IATP IIN+A LE
Sbjct: 512 HIRVQKSIKLWSFYLDLLESMIENNNQIDEIEKVINAYNITIDLKIATPLTIINFANFLE 571
Query: 561 EHKYFEDAFRVYERGVKIFKYPHVK-DIWVTYLSKFVKRYGKTKLERARELFENAV---- 615
E ++E +F YE G+KIFK +K +IW YLSK +K + +ER R+LFE +
Sbjct: 572 EWNFYERSFSAYEMGLKIFKDSKIKFEIWNIYLSKIIKH--ELNIERIRDLFEQCLNESS 629
Query: 616 ----ETAPADAVKPLYLQYAKLEEDYGLAKRAMKV----------------YDQATKAVP 655
PA+ KP+YL Y++ E+ G +++K+ Y +A K
Sbjct: 630 IEGYNGCPANLCKPVYLLYSQYEQSKGWFTKSVKILQQGLSKLDDGYNQEFYTKAEKDTI 689
Query: 656 NHEKLGMYEIYIARAAEIFGVPKTREIYEQAI-ESGLPDKDVKAMCLKYAELEKSLGEID 714
+K +Y++ I++ ++ +TR+IYEQ++ ++ L ++ + +++ E L E +
Sbjct: 690 LRDKFDIYQVLISKILKLNDHNETRKIYEQSLKDNQLTLPNLIQLTMEFINFETELMEFN 749
Query: 715 RARGIYVFASQFADPRSDT--EFWNRWHEFEVNHGNEDTFREMLRIKRSVSASYSQ 768
R R ++ + Q ++P+S W+ W FE+NHGNE TF++MLR KR + + +
Sbjct: 750 RVRSLFKYVCQLSNPQSPLIEPIWHNWETFELNHGNEATFKDMLRFKRKIVTEFEK 805
>sp|Q75EF0|SYF1_ASHGO Pre-mRNA-splicing factor SYF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SYF1 PE=3
SV=2
Length = 803
Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 208/794 (26%), Positives = 375/794 (47%), Gaps = 79/794 (9%)
Query: 8 YPSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSYKLWHAYL 67
+ + +DL++E +L+ P S+ W RY+ AKR+ P +V YER L+ALP +++W YL
Sbjct: 4 FVTAEDLVHEYSVLQEPDSVVNWSRYIAAKRDDPCSVSWV-YERCLQALPAQWEVWREYL 62
Query: 68 IERLSIVKNL-PITHP-EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTF 125
R+ ++ + + H E+E +N F R + + W ++L Q + R+
Sbjct: 63 QFRMRLLDGVCAVQHAAEFEKVNRLFWRCVEHNAAVVEAWRLFLGHAQRQGALALVRQVV 122
Query: 126 DRALCALPVTQHDRIWEIYLRFV------EQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
D AL + + +H +WE + ++ E+ + E L R + + ED
Sbjct: 123 DAALRGVGLAKHRTVWEDVVAYIEELLPAEETDLGEEQDLHELVRGALFGGAGAEDAGAD 182
Query: 180 LVKSKLWQ------EAAERLASVLNDDQFYSI---------------KGKTKHRLWLELC 218
+ S + + E AE + ++L Y+ K K + +
Sbjct: 183 IWSSAMLRRYIQVAEDAEAVLALLQRTHDYATVVAVYEKHVLPVTRAKHKGRQSYESQFR 242
Query: 219 DLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADYYIRRELFEKARDIFEEGMMT 278
L+ T + DA+ R + F + L LA +Y+++ + + D+ + +
Sbjct: 243 YLVALDHTGATAKLEDAVARCA-QLFPERAPSLTIFLAKHYVKQGNYNRCTDVLTDSLKH 301
Query: 279 VVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAE 338
+F+ ++D FEE ++ + ++E ++EE A
Sbjct: 302 TAKSSEFASLYDFLVVFEESLIEVVLEH----LQEHPENEERWGA--------------- 342
Query: 339 FVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGN 398
D++ +L+ L+ L N + LRQ P NV+ W RV++F+
Sbjct: 343 ---------------DLERHTDQLDGLLADHALLLNDLKLRQEPDNVKHWLDRVELFDKA 387
Query: 399 PTKQILTYTEAVRTVD--PMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKT 456
+K + Y +A+ +++ G+ TLW +A+LY A+ I DKA+ V Y
Sbjct: 388 ASKASV-YADAIASINYKSQTVPGQLGTLWWQYAQLYIDDGQYETAKTILDKALNVPYNF 446
Query: 457 VDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVE--VRRRVAADGNEPVQMKLHKS 514
+ IW +WAE EL+ A++++ A P +R + + P Q + S
Sbjct: 447 LQDPELIWTKWAEEELKRAGLDAAMQVLSHALQIPDDHELLRDKFESHEKMPAQTVIFSS 506
Query: 515 LRLWTFYVDL----EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFR 570
L+LW+FY+DL ES +LE T+A YE + L+IATP + +NYA L++ ++F
Sbjct: 507 LKLWSFYIDLLEASSESDEHLERTKAAYEATIQLKIATPLLFVNYAHYLQDKGNHVESFS 566
Query: 571 VYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADA-VKPLYLQ 629
+YER V IF +IW Y+ + +K YG K E+ R+LFE++++ A KP +L
Sbjct: 567 IYERAVDIFPAETAFEIWDIYIGEALK-YGLPK-EQIRDLFESSLKMANEGVECKPFFLL 624
Query: 630 YAKLEEDYGLAKRAMKVYDQATKAVPNHE-KLGMYEIYIARAAEIFGVPKTREIYEQAIE 688
YAK E D G+ + A + +A +A + K ++ + + + G R +YE+ I+
Sbjct: 625 YAKFERDNGMIETAANILHRACRAAQTMDAKRSLWTLCLNWCRQELGGSYARALYEECIQ 684
Query: 689 SGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGN 748
+ LP+ L+YA++E+ L ++ RAR + + ++ P ++ + W W FE+ HGN
Sbjct: 685 A-LPNHVAVVYVLEYAKVEEGLKQVKRARALLQYGARLLHPANNADLWEYWELFELRHGN 743
Query: 749 EDTFREMLRIKRSV 762
+DT+++ML++KR V
Sbjct: 744 KDTYKDMLQLKRKV 757
>sp|Q6CYA2|SYF1_KLULA Pre-mRNA-splicing factor SYF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SYF1 PE=3 SV=1
Length = 798
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 215/799 (26%), Positives = 369/799 (46%), Gaps = 92/799 (11%)
Query: 1 MAISKELYPSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRF-VIYERALKALPGS 59
M I K + E+D+ +E ++R + W RYL KR A + +YER LK +
Sbjct: 1 MEIDK--FVKEEDIPFEYGVVRERDNAVSWSRYLATKRSAGDELNLDWLYERCLKEIKDD 58
Query: 60 YKLWHAYLIERLSIVKNLPITH--PEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKF 117
+ LW +L R+ ++ + I EY ++ FE+ L + K+ WIMY+E + K
Sbjct: 59 WHLWKEFLKWRIELLNDCDIFRHKDEYNKISLLFEQCLTSCGKVGDAWIMYMEWVIQFKD 118
Query: 118 ITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFI 177
+ + R +AL ++ H+ IW + + F+ E + I+ +Y+ S +ED I
Sbjct: 119 LKRIRELLGKALRSMSWEYHEAIWRVVIDFIINE-LLIDNK--------RYELS-LEDSI 168
Query: 178 EFLVK--------SKLWQEAAERLASVLNDDQ-------FYSIKGKTKHRLW-------- 214
+ V + LW + + S++ DD F + T R++
Sbjct: 169 YYFVHGEHSTNFDTDLWSSSILQRYSLICDDIEPLLIYIFKTHDWSTIVRVFEKHLSPNL 228
Query: 215 ----LELCDLLTTHATEI----SGLNVDAIIRGGIRKFTDEVGRLWTSLADYYIRRELFE 266
L +L ++ T + + V A++ I F + G L T L IR+
Sbjct: 229 KPSQTSLFELYVSYITSMILVDNSAGVAAVVDQCIELFPFKKGELKTYLIFNLIRQGKIT 288
Query: 267 KARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEEDDEEHGSAEDE 326
+A E+ + + +FSV++D + + EE++ + K +DD
Sbjct: 289 EAELYLEKVISETKDIIEFSVLYDFWIRMEELLTQELIQKM-------KDDNSEKQRLFA 341
Query: 327 DIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSVLLRQNPHNVE 386
+IRL + L +K+ +RL LE LR+ P+N++
Sbjct: 342 NIRLHAD---------TLTSL----IKNHTIRLNDLE--------------LRREPNNIK 374
Query: 387 QWHRRVKIFEGNPTKQILTYTEAVRTVD--PMKAVGKPHTLWVAFAKLYETYKDIANARV 444
W RVK+F+ K + Y +AV TVD G LW + +L+E +DI + V
Sbjct: 375 LWLERVKLFDTISDKAKV-YADAVLTVDYRLQTTPGLLGELWCQYCRLFE--EDIEKSEV 431
Query: 445 IFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP-SVEVRRRVAADG 503
+ DKA V +K + L ++W W E L+ ++ A++++ P + E+ + G
Sbjct: 432 LLDKATNVPFKFLVDLENVWLYWCEYRLK-RSIDDAIKVLSVVLEIPDNHELLLQKFEKG 490
Query: 504 NEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHK 563
P Q + S RLW Y+DL E GN + YE + ++ ATP + INYALL E
Sbjct: 491 ESPAQAAIFSSKRLWAMYLDLLEVKGNYGTAVNAYETAILIKAATPAMFINYALLNESSG 550
Query: 564 YFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPAD-A 622
+ +A V+ER V+IF K IW YL +K E+ R++FE+A++ A + A
Sbjct: 551 HQAEALAVFERSVEIFPPSVSKSIWDIYLDVALK--ADITKEQKRDIFESAIKLAASGVA 608
Query: 623 VKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHE-KLGMYEIYIARAAEIFGVPKTRE 681
+ +Y+ E + G +R++++ + K + + E K ++E I R+ + V TR+
Sbjct: 609 CVSFFEKYSDFELNLGFHERSVEILHKGAKNISDLESKCTLWEECINRSEKQLDVNHTRK 668
Query: 682 IYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHE 741
+YE+ IE+ LP+ L +A LE+S E+ R R + + S+ P + E W+ W
Sbjct: 669 LYEECIET-LPNSKAIKFLLPFAILEESRNEVARCRALLDYGSKLLKPAQNEELWDFWRN 727
Query: 742 FEVNHGNEDTFREMLRIKR 760
FE HG +D+F+ ML+ +R
Sbjct: 728 FETMHGTKDSFKNMLKARR 746
>sp|Q6FUJ7|SYF1_CANGA Pre-mRNA-splicing factor SYF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SYF1
PE=3 SV=1
Length = 835
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 255/524 (48%), Gaps = 50/524 (9%)
Query: 255 LADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEE 314
LAD++++R F+K + + + V +F I+ + FE+ V +E
Sbjct: 305 LADFHMKRADFDKMEKVLTKALSETVKTNEFIAIYTYHVNFEQAYVETIF-------DEM 357
Query: 315 EDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELAN 374
DD E + KK W ++ D L L L +R L N
Sbjct: 358 RDDPE-----------------IQVQKK-----WKSEMDD---HLIILGDLTSRYHLLVN 392
Query: 375 SVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH----TLWVAFA 430
+ +RQNP++V W R +FE + K+ + EA++T+DP+K K + LW +A
Sbjct: 393 DLKIRQNPNSVSNWLERTTLFE-DFDKKCEVFVEAIKTIDPIKVKDKEYGMLGKLWCDYA 451
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRA-TA 489
K+Y + K AR I++ A +V + + L +W WA E + N + AL+++R+A T
Sbjct: 452 KVYWSNKSYEEARTIYESATKVPFPDLQDLEIVWHTWAVNEFQIHNIERALKILRKALTV 511
Query: 490 EPSVE--VRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAV--YERILDLR 545
PS E + R + + P Q L S RLW +Y+DL ES+ +++ + Y+ ++ L+
Sbjct: 512 PPSYESIIDRFKSENRRLPSQTILFTSKRLWNYYIDLLESIPTIDANDVIRAYDTLMTLK 571
Query: 546 IATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLE 605
+ TP I+NYA L+++ + +VYE+G+ +F ++W L + ++ + E
Sbjct: 572 LITPVGILNYATFLKQNNNLHGSLQVYEKGINMFPPEICYELWTLLLDEVMEPAHQATKE 631
Query: 606 RARELFENAVETAPAD--AVKPLYLQYAKLEEDYGLAKRAMK-VYDQATKAVPNHEKL-- 660
R RELFE ++ + +Y++Y+ E L RA+ + A + N E+L
Sbjct: 632 RIRELFEQCLQQLGNTDININSIYVKYSDFEIHNKLFSRAIDLLMSGARRPYTNKEQLKQ 691
Query: 661 --GMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARG 718
++E I++ E G R++ + I+ LP+ LK+ +LE SL + RAR
Sbjct: 692 RVDLWESAISKCEEFLGPDSLRQLLSECIQE-LPNSKAITYVLKFTKLEMSLSDYTRARE 750
Query: 719 IYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSV 762
+ + +Q P + E W W +FE+ HG++ ++EML +K+ +
Sbjct: 751 LLQYGAQLLPPIKNEELWGLWEQFELEHGDKSYYKEMLLLKQKL 794
>sp|Q04048|SYF1_YEAST Pre-mRNA-splicing factor SYF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SYF1 PE=1 SV=1
Length = 859
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 266/538 (49%), Gaps = 61/538 (11%)
Query: 254 SLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEE 313
SLA YYI R + D+ ++ + + DF I++ Y FE+ + K
Sbjct: 308 SLAKYYISRGRLDSCGDLLKKSLQQTLRYSDFDRIYNFYLLFEQECSQFILGKL------ 361
Query: 314 EEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELA 373
+E+D + + +D +L + +A E L+N
Sbjct: 362 KENDSKFFNQKDWTEKLQAH-------------------------MATFESLINLYDIYL 396
Query: 374 NSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHT---LWVAFA 430
N V LRQ+ + VE W +RV + + + ++ Y+EA+ +DP K VG P + LW ++
Sbjct: 397 NDVALRQDSNLVETWMKRVSL-QKSAAEKCNVYSEAILKIDPRK-VGTPGSFGRLWCSYG 454
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAE 490
LY I+ AR ++ ++++V Y ++ L I+ WA+ EL + + A ++ A
Sbjct: 455 DLYWRSNAISTARELWTQSLKVPYPYIEDLEEIYLNWADRELDKEGVERAFSILEDALHV 514
Query: 491 PS-VEVRRRVAADGNE--PVQMKLHKSLRLWTFYVDLEESLGN---------LESTRAVY 538
P+ E+ +G+ P Q L SLR+W+ Y+D E+ T+ Y
Sbjct: 515 PTNPEILLEKYKNGHRKIPAQTVLFNSLRIWSKYIDYLEAYCPKDANSSDKIFNKTKMAY 574
Query: 539 ERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVK-DIWVTYLSKFVK 597
++DLR+ TP + N+AL L+ H ++F+VYE+ + +F P ++ ++W+ YL
Sbjct: 575 NTVIDLRLITPAMAENFALFLQNHYEVMESFQVYEKTIPLFP-PEIQYELWIEYLEVATS 633
Query: 598 -RYGKTKLERARELFENAVETAPADAV--KPLYLQYAKLEEDY-GLAKRAMKVYDQ---- 649
+ E R LFE A++ ++ + K +++ Y+ EE GL +++++ +
Sbjct: 634 HQLSSLSPEHIRFLFEKALKNLCSNGIDCKTIFIAYSVFEERISGLISKSIEILRRGAVI 693
Query: 650 ATKAVPNH--EKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELE 707
T +V H +L ++ + I++A G TRE+Y++ I+ LP+ +K+++ E
Sbjct: 694 GTVSVSTHLESRLQLWRMCISKAESTLGPSVTRELYQECIQI-LPNSKAVEFVIKFSDFE 752
Query: 708 KSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSAS 765
S+GE RAR I + ++ P +TE W+ + FE+ HG+++T+++ML++K+ + ++
Sbjct: 753 SSIGETIRAREILAYGAKLLPPSRNTELWDSFEIFELKHGDKETYKDMLKMKKVLESN 810
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV--IYERALKALPGSYKLWHAYL 67
+++D+ +E E+ + P ++ W RY+ +E + + +YER +W Y+
Sbjct: 20 NDEDVAFEYEIQKTPQNILTWKRYIEYWKEEGRTDKQIRWLYERFCSQFVTDTSIWEDYI 79
Query: 68 IERLSIVKNLPITHPEYETLNNTFERAL-VTMHKMPRIWIMYLETLTSQKFITKARRTFD 126
R K + E + F+R L + RI + YLE Q + R
Sbjct: 80 --RWESTKEVV----ETSRIFWLFQRCLKSCVRDCDRICLSYLELAIEQYDLAMIRHALA 133
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPI 155
+L + H ++W+ ++FVE++ +P+
Sbjct: 134 SSLMKMEREMHRKVWDPVIKFVEEKVLPL 162
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 177/365 (48%), Gaps = 49/365 (13%)
Query: 421 KPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
K +++ +A E+ KD+ AR +F++ + ++++ + ++W ++AEME+++KN A
Sbjct: 73 KTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHR----IPTVWIKYAEMEMKNKNINLA 128
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
+ RA L + +LW Y +E+ LGN + RA++ER
Sbjct: 129 RNIWDRAVC--------------------LLPRVSQLWFKYTFMEDMLGNYPAARAIFER 168
Query: 541 ILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYG 600
+ + PQ +Y + K FE+ ++E+ + + +P++K W+ Y +KF +R G
Sbjct: 169 WMQWK-PEPQAWNSYLKFEQRLKLFENTRLIFEKYILV--HPYIK-TWIKY-TKFEERLG 223
Query: 601 KTKLERARELFENAVETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEK 659
+E AR +F+ A+E D + L++ +AK EE Y +RA +Y A VP
Sbjct: 224 --NIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRA 281
Query: 660 LGMYEIYI---ARAAEIFGVP-----KTREIYEQAIESGLPDKDVKAMCLKYAELEKSLG 711
+++ + + + G+ K R YE+ I+ + D+ Y ++E+ G
Sbjct: 282 KDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDI---WFDYLKMEEING 338
Query: 712 EIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR--IKRSVSASYSQT 769
EI++ R IY + P ++ + W R+ +N+ F E++ ++R+ S YS+
Sbjct: 339 EIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYA---LFEELISKDMERARSV-YSEC 394
Query: 770 HFILP 774
++P
Sbjct: 395 IKLIP 399
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 140/334 (41%), Gaps = 85/334 (25%)
Query: 411 RTVDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLAS-----IWC 465
R ++ + G L++AFAK E YK+I ARVI+ A +DH+ ++
Sbjct: 234 RAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYA-------IDHVPKSRAKDLFD 286
Query: 466 EWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLE 525
+ E +H + R E V ++R + E ++ K K+ +W Y+ +E
Sbjct: 287 TFTNFEKQHGD---------RIGIEDVVLGKKRFQYE--EEIK-KNSKNYDIWFDYLKME 334
Query: 526 ESLGNLESTRAVYERILDLRIATPQ---------IIINYALLLEE-HKYFEDAFRVYERG 575
E G +E TR +YER + T + + INYAL E K E A VY
Sbjct: 335 EINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSEC 394
Query: 576 VKIFKYPH----VKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYA 631
+K+ PH IW+ Y + +++ L++AR ++ A+ P
Sbjct: 395 IKLI--PHKEFSFSKIWILYANFEIRQLN---LDKARLIYGQAIGRNPKS---------- 439
Query: 632 KLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGL 691
K++DQ YI E+ + R +YE+ +E +
Sbjct: 440 -------------KIFDQ----------------YIHLEIELGNFDRVRTLYEKYLEI-M 469
Query: 692 PDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQ 725
PD + A C K+A+LE LGE RAR I+ A Q
Sbjct: 470 PD-NCDAWC-KFAQLETELGETVRARAIFELAIQ 501
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 37/244 (15%)
Query: 535 RAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSK 594
R YE +L T I I YA E K A V+ER + I + +W+ Y
Sbjct: 61 RQQYESLLGRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDIDH--RIPTVWIKYAEM 118
Query: 595 FVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAV 654
+K + AR +++ AV P V L+ +Y +E+ G A ++++ +
Sbjct: 119 EMK---NKNINLARNIWDRAVCLLP--RVSQLWFKYTFMEDMLGNYPAARAIFERWMQWK 173
Query: 655 PN----------HEKLGMYE-------------------IYIARAAEIFG-VPKTREIYE 684
P ++L ++E I + E G + R I++
Sbjct: 174 PEPQAWNSYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIKYTKFEERLGNIENARTIFQ 233
Query: 685 QAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEV 744
+AIE D + + + + +A+ E+ EI+RAR IY +A + ++ + FE
Sbjct: 234 RAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEK 293
Query: 745 NHGN 748
HG+
Sbjct: 294 QHGD 297
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ FER L H++P +WI Y E K I AR +DRA+C LP R+ +++ ++
Sbjct: 96 SVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLP-----RVSQLWFKYT 150
Query: 149 EQEGI--PIETSLRVYRRYLKYDP 170
E + + ++ R++++ P
Sbjct: 151 FMEDMLGNYPAARAIFERWMQWKP 174
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSY--KLWHAYLIERLS 72
YEEE+ +N + +W+ YL + + +K IYER++ LP + K W Y+ ++
Sbjct: 313 YEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWIN 372
Query: 73 IVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDRA 128
+ + E + + + + HK +IWI+Y Q + KAR + +A
Sbjct: 373 YALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQA 432
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+ P + +I++ Y+ +E E + +Y +YL+ P + + + +F
Sbjct: 433 IGRNPKS---KIFDQYIH-LEIELGNFDRVRTLYEKYLEIMPDNCDAWCKF 479
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 148/327 (45%), Gaps = 51/327 (15%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A K+ AR IF++A+ VN +V +W + E E+R++N A L+
Sbjct: 75 WMRYASWELEQKEFRRARSIFERALDVNPTSV----VLWIRYIESEMRNRNINHARNLLD 130
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V+ + W YV +EE+LGN++ TR V+ER +
Sbjct: 131 RAVTILPRVD---------------------KFWYKYVYMEETLGNIQGTRQVFERWMSW 169
Query: 545 RIATPQIIINYALLLEEHKY--FEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
P A + E +Y FE A +++R + P W+ + ++F + YG +
Sbjct: 170 ---EPDEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPEPRN---WIKW-ARFEEEYGTS 222
Query: 603 KLERARELFENAVETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLG 661
L RE++ A+ET D + + L++ YAK E +RA +Y A +P + +
Sbjct: 223 DL--VREVYGMAIETLGEDFMDEKLFIAYAKFEAKLKEYERARAIYKYALDRLPRSKAMA 280
Query: 662 MYEIYIARAAEIFG---------VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGE 712
+++ Y + FG + K R YE+ ++ + DV +A LE++ G+
Sbjct: 281 LHKAYTTFEKQ-FGDREGVEDVILSKRRVQYEEQLKENPRNYDV---WFDFARLEETSGD 336
Query: 713 IDRARGIYVFASQFADPRSDTEFWNRW 739
DR R IY A P + W R+
Sbjct: 337 PDRVRDIYERAIAQIPPSQEKRHWRRY 363
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 160/390 (41%), Gaps = 69/390 (17%)
Query: 358 RLARLEHLM----NRRPELANSVLLRQNPHNVEQWHRRVKI-FEGNPTKQILTYTEAVRT 412
R A LE L +R E + V R+N N+ W R E ++ + E
Sbjct: 43 RFADLEELHEYQGRKRKEFEDYV--RRNRLNMNNWMRYASWELEQKEFRRARSIFERALD 100
Query: 413 VDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMEL 472
V+P V LW+ + + ++I +AR + D+AV + + + W ++ ME
Sbjct: 101 VNPTSVV-----LWIRYIESEMRNRNINHARNLLDRAVTI----LPRVDKFWYKYVYMEE 151
Query: 473 RHKNFKGALELMRR-ATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNL 531
N +G ++ R + EP +G W+ Y+ LE+
Sbjct: 152 TLGNIQGTRQVFERWMSWEPD---------EG-------------AWSAYIKLEKRYNEF 189
Query: 532 ESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTY 591
E RA+++R + P+ I +A EE+ + VY ++ + +
Sbjct: 190 ERARAIFQRFTIVH-PEPRNWIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLFIA 248
Query: 592 LSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LAKR 642
+KF + + ERAR +++ A++ P L+ Y E+ +G L+KR
Sbjct: 249 YAKFEAKL--KEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKR 306
Query: 643 AMKVYDQATKAVPNHEKLGMYEIY--IARAAEIFGVP-KTREIYEQAIESGLPDKDVKAM 699
++ Y++ K P + Y+++ AR E G P + R+IYE+AI + +P K
Sbjct: 307 RVQ-YEEQLKENPRN-----YDVWFDFARLEETSGDPDRVRDIYERAI-AQIPPSQEKRH 359
Query: 700 CLKYAEL--------EKSLGEIDRARGIYV 721
+Y L E ++DRAR IY
Sbjct: 360 WRRYIYLWIFYAIWEEMEAKDVDRARQIYT 389
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 41/267 (15%)
Query: 378 LRQNPHNVEQWHRRVKIFE--GNPTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFA 430
L++NP N + W ++ E G+P + Y A+ + P + K H LW+ +A
Sbjct: 314 LKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQE--KRHWRRYIYLWIFYA 371
Query: 431 KLYET-YKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATA 489
E KD+ AR I+ + +++ A IW A+ ++R + + A + + +A
Sbjct: 372 IWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIG 431
Query: 490 EPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATP 549
+ +L+ Y+DLE L R +YE+ ++ A
Sbjct: 432 ---------------------MCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANS 470
Query: 550 QIIINYALLLEEHKYFEDAFRVYERGV--KIFKYPHVKDIWVTYLSKFVKRYGKTKLERA 607
Q I YA L E A ++E G+ + P + +W Y+ F + G + +R
Sbjct: 471 QSWIKYAELERGLDDSERARAIFELGIDQPMLDMPEL--VWKAYID-FEEYEG--EYDRV 525
Query: 608 RELFENAVETAPADAVKPLYLQYAKLE 634
R+L+E ++ D VK +++ YA+ E
Sbjct: 526 RQLYERLLQK--TDHVK-VWINYARFE 549
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 145/386 (37%), Gaps = 89/386 (23%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W A+ KL + Y + AR IF + + V W +WA E + G +L+R
Sbjct: 176 WSAYIKLEKRYNEFERARAIFQR-----FTIVHPEPRNWIKWARFEEEY----GTSDLVR 226
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
+ G + + KL + Y E L E RA+Y+ LD
Sbjct: 227 EVYGMA-------IETLGEDFMDEKLFIA------YAKFEAKLKEYERARAIYKYALDRL 273
Query: 546 IATPQIIINYALLLEEHKY-----FEDAF----RV-YERGVKIFKYPHVKDIWVTYLSKF 595
+ + ++ A E ++ ED RV YE +K + P D+W + ++
Sbjct: 274 PRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQLK--ENPRNYDVWFDF-ARL 330
Query: 596 VKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGL--------AKRAMKVY 647
+ G +R R+++E A+ P K + +Y L Y + RA ++Y
Sbjct: 331 EETSGDP--DRVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIY 388
Query: 648 DQATKAVPNHEKLGMYEIYIARAA------------------------------------ 671
+ K +P H+K +I++ +A
Sbjct: 389 TECLKLIP-HKKFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKDKLFRGYIDLER 447
Query: 672 EIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRS 731
++F + R +YE+ IE + +KYAELE+ L + +RAR I+ P
Sbjct: 448 QLFEFVRCRTLYEKQIEWNPANSQS---WIKYAELERGLDDSERARAIFELG--IDQPML 502
Query: 732 DTE--FWNRWHEFEVNHGNEDTFREM 755
D W + +FE G D R++
Sbjct: 503 DMPELVWKAYIDFEEYEGEYDRVRQL 528
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +WI Y+E+ + I AR DRA+ LP D
Sbjct: 83 LEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVTILPRV--D 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
+ W Y+ ++E+ I+ + +V+ R++ ++P
Sbjct: 141 KFWYKYV-YMEETLGNIQGTRQVFERWMSWEP 171
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN ++ W RY + E F++ I+ERAL P S LW Y+ S +
Sbjct: 61 FEDYVRRNRLNMNNWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYI---ESEM 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
+N I H N +RA+ + ++ + W Y+ + I R+ F+R + P
Sbjct: 118 RNRNINHA-----RNLLDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEP- 171
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
+ W Y++ +E+ E + +++R+ P
Sbjct: 172 --DEGAWSAYIK-LEKRYNEFERARAIFQRFTIVHP 204
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 49/326 (15%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A K+ AR IF++A+ V+ +V +W + E E+R++N A L+
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSV----PLWIRYIESEMRNRNINHARNLLD 130
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V+ +LW YV +EE+LGN+ TR V+ER +
Sbjct: 131 RAVTILPRVD---------------------KLWYKYVYMEETLGNIPGTRQVFERWMSW 169
Query: 545 RIATPQIIINYALLLEEHKY--FEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
P A + E +Y FE A +++R + P W+ + ++F + YG +
Sbjct: 170 ---EPDEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPEPRN---WIKW-ARFEEEYGTS 222
Query: 603 KLERARELFENAVETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLG 661
L RE++ AVET D + + L++ YA+ E +RA +Y A +P + +
Sbjct: 223 DL--VREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYERARAIYKYALDRLPRSKSIT 280
Query: 662 MYEIYIA--------RAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEI 713
+++ Y E + K R YE+ ++ L + DV +A LE+ G+
Sbjct: 281 LHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRNYDV---WFDFARLEEQSGDP 337
Query: 714 DRARGIYVFASQFADPRSDTEFWNRW 739
+R R +Y A P + W R+
Sbjct: 338 ERVRDVYERAIAQIPPSQEKRHWRRY 363
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 126/572 (22%), Positives = 228/572 (39%), Gaps = 121/572 (21%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +WI Y+E+ + I AR DRA+ LP D
Sbjct: 83 LEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRV--D 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLN 198
++W Y+ ++E+ I + +V+ R++ ++P E +K + ER ++
Sbjct: 141 KLWYKYV-YMEETLGNIPGTRQVFERWMSWEPD--EGAWSAYIKLEKRYNEFERARAIF- 196
Query: 199 DDQFYSIKGKTKHRLWLELCDLLTTHAT-----EISGLNVDAIIRGGIRKFTDEVGRLWT 253
Q ++I + R W++ + T E+ GL V+ + F DE +L+
Sbjct: 197 --QRFTI-VHPEPRNWIKWARFEEEYGTSDLVREVYGLAVETLGED----FMDE--KLFI 247
Query: 254 SLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE------EIMVSAKMAKP 307
+ A + + + +E+AR I++ + + + + + +Y+ FE E + + +AK
Sbjct: 248 AYARFETKLKEYERARAIYKYALDRLPRSKSIT-LHKAYTTFEKQFGDREGVENVILAKR 306
Query: 308 DLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMN 367
+ EE+ +K+ L + DV ARLE +
Sbjct: 307 RVQYEEQ-------------------------LKENLRNY------DVWFDFARLEE-QS 334
Query: 368 RRPELANSVLLR---QNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHT 424
PE V R Q P + E+ H R I+
Sbjct: 335 GDPERVRDVYERAIAQIPPSQEKRHWRRYIY----------------------------- 365
Query: 425 LWVAFAKLYETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALE 482
LW+ +A L+E KDI AR ++ + +++ A +W A+ E+R N + A +
Sbjct: 366 LWIFYA-LWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARK 424
Query: 483 LMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERIL 542
+ +A + +L+ Y+DLE L R +YE+ +
Sbjct: 425 TLGQAIG---------------------MCPKDKLFRGYIDLERQLFEFVRCRTLYEKQI 463
Query: 543 DLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
+ + Q I YA L E A +YE G+ + +W Y+ F G
Sbjct: 464 EWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQPTLDMPELVWKAYID-FEDDEG-- 520
Query: 603 KLERARELFENAVETAPADAVKPLYLQYAKLE 634
+ ER R+L+E ++ D VK +++ YA+ E
Sbjct: 521 EYERERQLYERLLQK--TDHVK-VWINYARFE 549
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 67/359 (18%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
LW+ + + ++I +AR + D+AV + + + +W ++ ME N G ++
Sbjct: 108 LWIRYIESEMRNRNINHARNLLDRAVTI----LPRVDKLWYKYVYMEETLGNIPGTRQVF 163
Query: 485 RR-ATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
R + EP +G W+ Y+ LE+ E RA+++R
Sbjct: 164 ERWMSWEPD---------EG-------------AWSAYIKLEKRYNEFERARAIFQRFTI 201
Query: 544 LRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTK 603
+ P+ I +A EE+ + VY V+ + + ++F +TK
Sbjct: 202 VH-PEPRNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARF-----ETK 255
Query: 604 L---ERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LAKRAMKVYDQAT 651
L ERAR +++ A++ P L+ Y E+ +G LAKR ++ +Q
Sbjct: 256 LKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLK 315
Query: 652 KAVPNHEKLGMYEIY--IARAAEIFGVP-KTREIYEQAIESGLPDKDVKAMCLKYAEL-- 706
E L Y+++ AR E G P + R++YE+AI + +P K +Y L
Sbjct: 316 ------ENLRNYDVWFDFARLEEQSGDPERVRDVYERAI-AQIPPSQEKRHWRRYIYLWI 368
Query: 707 ------EKSLGEIDRARGIYVFASQFADPRSDTEFWNRW---HEFEVNHGNEDTFREML 756
E +IDRAR +Y + P F W +FEV N R+ L
Sbjct: 369 FYALWEEMEAKDIDRARQVYTECLKLI-PHKKFTFAKVWLMKAQFEVRQLNLQAARKTL 426
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 108/281 (38%), Gaps = 72/281 (25%)
Query: 378 LRQNPHNVEQWHRRVKIFE--GNPTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFA 430
L++N N + W ++ E G+P + Y A+ + P + K H LW+ +A
Sbjct: 314 LKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQE--KRHWRRYIYLWIFYA 371
Query: 431 KLYETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRAT 488
L+E KDI AR ++ + +++ A +W A+ E+R N + A + + +A
Sbjct: 372 -LWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAI 430
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIAT 548
+ +L+ Y+DLE L R +YE+ ++ +
Sbjct: 431 G---------------------MCPKDKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSN 469
Query: 549 PQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERAR 608
Q I YA L ERG+ ERAR
Sbjct: 470 SQSWIQYAEL--------------ERGL-------------------------DDTERAR 490
Query: 609 ELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQ 649
++E ++ D + ++ Y E+D G +R ++Y++
Sbjct: 491 AIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQLYER 531
Score = 40.0 bits (92), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN ++ W RY + E F++ I+ERAL S LW Y+ S +
Sbjct: 61 FEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYI---ESEM 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
+N I H N +RA+ + ++ ++W Y+ + I R+ F+R + P
Sbjct: 118 RNRNINHA-----RNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEP- 171
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
+ W Y++ +E+ E + +++R+ P
Sbjct: 172 --DEGAWSAYIK-LEKRYNEFERARAIFQRFTIVHP 204
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 49/334 (14%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ E+ K+I AR I+++A+ V+Y+ + ++W ++AEME++++ A +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNI----TLWLKYAEMEMKNRQVNHARNIWD 139
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V + W Y +EE LGN+ R V+ER ++
Sbjct: 140 RAITTLPRVN---------------------QFWYKYTYMEEMLGNVAGARQVFERWMEW 178
Query: 545 RIATP--QIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
+ IN+ L +K E A +YER V + +P VK+ W+ Y ++F +++
Sbjct: 179 QPEEQAWHSYINFEL---RYKEVERARTIYERFVLV--HPAVKN-WIKY-ARFEEKHA-- 229
Query: 603 KLERARELFENAVETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLG 661
AR+++E AVE + + + LY+ +AK EE+ +R +Y A + E
Sbjct: 230 YFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQE 289
Query: 662 MYEIYIA--------RAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEI 713
+++ Y R E V K R YE+ +++ + D Y L +S E
Sbjct: 290 LFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDA---WFDYLRLVESDAEA 346
Query: 714 DRARGIYVFASQFADPRSDTEFWNRWHEFEVNHG 747
D R +Y A P + W R+ VN+
Sbjct: 347 DTVREVYERAIANVPPIQEKRHWKRYIYLWVNYA 380
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 116/537 (21%), Positives = 212/537 (39%), Gaps = 105/537 (19%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W ++ YK++ AR I+++ V V+ + W ++A E +H F A ++
Sbjct: 185 WHSYINFELRYKEVERARTIYERFVLVHPAVKN-----WIKYARFEEKHAYFAHARKVYE 239
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RA V G+E H L+ + EE+ E R +Y+ LD R
Sbjct: 240 RA-----------VEFFGDE------HMDEHLYVAFAKFEENQKEFERVRVIYKYALD-R 281
Query: 546 IA---TPQIIINYALL---LEEHKYFEDAF---RVYERGVKIFKYPHVKDIWVTYLSKFV 596
I+ ++ NY + + + ED R ++ ++ PH D W YL + V
Sbjct: 282 ISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYL-RLV 340
Query: 597 KRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGL--------AKRAMKVYD 648
+ + + RE++E A+ P K + +Y L +Y L +R +VY
Sbjct: 341 E--SDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQ 398
Query: 649 QATKAVPNHEKLGMYEIYI-----------------ARAAEIFGVPK------------- 678
+ + +P H+K ++++ A I PK
Sbjct: 399 ASLELIP-HKKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQ 457
Query: 679 ------TREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSD 732
R++YE+ +E G P+ +K+AELE LG+I+RAR IY A + PR D
Sbjct: 458 LREFDRCRKLYEKFLEFG-PENCTS--WIKFAELETILGDIERARAIYELA--ISQPRLD 512
Query: 733 TE--FWNRWHEFEVNHG----NEDTFREMLRIKRSVSASYSQTHFILP---EYLMQKDQR 783
W + +FE+ + +R++L+ + V S F L E + K ++
Sbjct: 513 MPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQ 572
Query: 784 LSIDDAKDKLKQAGVHEDEMAALERQLAPAANNGNAKDSSRKVGFVSAGVESQ-----TD 838
+ ++A ++ E+ + LE + G D R + V+ + D
Sbjct: 573 I-YEEANKTMRNCEEKEERLMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQADD 631
Query: 839 GGIKTTANHEDIELPDESDSEEEEKVEIAQKDVPSAVYGGLARKREGSEEDGDNSAD 895
G + D P+++ ++ K+ K ++ ++RE +E+D D D
Sbjct: 632 GSDAGWEEYYDYIFPEDAANQPNLKLLAMAK-----LWKKQQQEREAAEQDPDKDID 683
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
W Y EESL ++ R++YER LD+ + + YA + +++ A +++R +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 578 IFKYPHVKDIW--VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEE 635
P V W TY+ + + + AR++FE +E P + + Y E
Sbjct: 144 TL--PRVNQFWYKYTYMEEML-----GNVAGARQVFERWMEWQPEEQA---WHSYINFEL 193
Query: 636 DYGLAKRAMKVYDQ---ATKAVPNHEKLGMYE---IYIARAAEIFGVPKTREIYEQAIES 689
Y +RA +Y++ AV N K +E Y A A R++YE+A+E
Sbjct: 194 RYKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHA---------RKVYERAVEF 244
Query: 690 GLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNE 749
+ + + + +A+ E++ E +R R IY +A + E + + FE G+
Sbjct: 245 FGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDR 304
Query: 750 DTFREMLRIKR 760
+++ KR
Sbjct: 305 RGIEDIIVSKR 315
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 60/434 (13%)
Query: 252 WTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKP--DL 309
W S ++ +R + E+AR I+E ++ V+++ Y++FEE A+ +
Sbjct: 185 WHSYINFELRYKEVERARTIYERFVLVHPAVKNWI----KYARFEEKHAYFAHARKVYER 240
Query: 310 SVE---EEEDDE---------EHGSAEDEDIRLDVNLSMAEFVKK----VLNGFWLHDVK 353
+VE +E DE E E E +R+ ++ K+ + + + + K
Sbjct: 241 AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK 300
Query: 354 DVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVR 411
D R +E ++ + ++ NPHN + W +++ E + + Y A+
Sbjct: 301 FGDRR--GIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIA 358
Query: 412 TVDPMKAVGKPH-----TLWVAFAKLYETY--KDIANARVIFDKAVQVNYKTVDHLASIW 464
V P++ K H LWV +A LYE KD R ++ ++++ A +W
Sbjct: 359 NVPPIQE--KRHWKRYIYLWVNYA-LYEELEAKDPERTRQVYQASLELIPHKKFTFAKMW 415
Query: 465 CEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDL 524
+A+ E+R KN L RRA + G P + KL K Y++L
Sbjct: 416 LYYAQFEIRQKN----LPFARRALG----------TSIGKCP-KNKLFKG------YIEL 454
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHV 584
E L + R +YE+ L+ I +A L E A +YE + +
Sbjct: 455 ELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMP 514
Query: 585 KDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAM 644
+ +W +Y+ ++ + + ER R L+ ++ V + Q+ G +
Sbjct: 515 EVLWKSYIDFEIE---QEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCR 571
Query: 645 KVYDQATKAVPNHE 658
++Y++A K + N E
Sbjct: 572 QIYEEANKTMRNCE 585
Score = 38.1 bits (87), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E + + +ERAL ++ +W+ Y E + + AR +DRA+ LP ++ W
Sbjct: 96 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRV--NQFWY 153
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSH--IEDFIEFLVKSKLWQEAAERLASVLNDD 200
Y E G + + +V+ R++++ P +I F ++ K ER ++ +
Sbjct: 154 KYTYMEEMLG-NVAGARQVFERWMEWQPEEQAWHSYINFELRYK----EVERARTIY--E 206
Query: 201 QFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV--GRLWTSLADY 258
+F + K+ W++ HA + + + F DE L+ + A +
Sbjct: 207 RFVLVHPAVKN--WIKYARFEEKHAY---FAHARKVYERAVEFFGDEHMDEHLYVAFAKF 261
Query: 259 YIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
++ FE+ R I++ + ++ ++ +F +Y+ FE
Sbjct: 262 EENQKEFERVRVIYKYA-LDRISKQEAQELFKNYTIFE 298
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 121/290 (41%), Gaps = 59/290 (20%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALP--GSYKLW--HAYLIER 70
YEEE+ NP + W+ YL + + +A +YERA+ +P + W + YL
Sbjct: 319 YEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVN 378
Query: 71 LSIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFD 126
++ + L P E ++ +L + HK ++W+ Y + QK + ARR
Sbjct: 379 YALYEELEAKDP--ERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALG 436
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLW 186
++ P +++++ Y+ +E + + ++Y ++L++ P + +I+F
Sbjct: 437 TSIGKCP---KNKLFKGYIE-LELQLREFDRCRKLYEKFLEFGPENCTSWIKFA------ 486
Query: 187 QEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTD 246
L ++L D +E + A L++ +
Sbjct: 487 -----ELETILGD---------------IERARAIYELAISQPRLDMPEV---------- 516
Query: 247 EVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
LW S D+ I +E E+ R+++ + + V+ ++ S++QFE
Sbjct: 517 ----LWKSYIDFEIEQEETERTRNLYRQLLQRTQHVK----VWISFAQFE 558
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 49/334 (14%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ E+ K+I AR I+++A+ V+Y+ + ++W ++AEME++++ A +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNI----TLWLKYAEMEMKNRQVNHARNIWD 139
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V + W Y +EE LGN+ R V+ER ++
Sbjct: 140 RAITTLPRVN---------------------QFWYKYTYMEEMLGNVAGARQVFERWMEW 178
Query: 545 RIATP--QIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
+ IN+ L +K E A +YER V + +P VK+ W+ Y ++F +++
Sbjct: 179 QPEEQAWHSYINFEL---RYKEVERARTIYERFVLV--HPAVKN-WIKY-ARFEEKHA-- 229
Query: 603 KLERARELFENAVETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLG 661
AR+++E AVE + + + LY+ +AK EE+ +R +Y A + E
Sbjct: 230 YFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQE 289
Query: 662 MYEIYIA--------RAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEI 713
+++ Y R E V K R YE+ +++ + D Y L +S E
Sbjct: 290 LFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDA---WFDYLRLVESDAEA 346
Query: 714 DRARGIYVFASQFADPRSDTEFWNRWHEFEVNHG 747
D R +Y A P + W R+ VN+
Sbjct: 347 DTVREVYERAIANVPPIQEKRHWKRYIYLWVNYA 380
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 116/537 (21%), Positives = 212/537 (39%), Gaps = 105/537 (19%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W ++ YK++ AR I+++ V V+ + W ++A E +H F A ++
Sbjct: 185 WHSYINFELRYKEVERARTIYERFVLVHPAVKN-----WIKYARFEEKHAYFAHARKVYE 239
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RA V G+E H L+ + EE+ E R +Y+ LD R
Sbjct: 240 RA-----------VEFFGDE------HMDEHLYVAFAKFEENQKEFERVRVIYKYALD-R 281
Query: 546 IA---TPQIIINYALL---LEEHKYFEDAF---RVYERGVKIFKYPHVKDIWVTYLSKFV 596
I+ ++ NY + + + ED R ++ ++ PH D W YL + V
Sbjct: 282 ISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYL-RLV 340
Query: 597 KRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGL--------AKRAMKVYD 648
+ + + RE++E A+ P K + +Y L +Y L +R +VY
Sbjct: 341 E--SDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQ 398
Query: 649 QATKAVPNHEKLGMYEIYI-----------------ARAAEIFGVPK------------- 678
+ + +P H+K ++++ A I PK
Sbjct: 399 ASLELIP-HKKFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQ 457
Query: 679 ------TREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSD 732
R++YE+ +E G P+ +K+AELE LG+I+RAR IY A + PR D
Sbjct: 458 LREFDRCRKLYEKFLEFG-PENCTS--WIKFAELETILGDIERARAIYELA--ISQPRLD 512
Query: 733 TE--FWNRWHEFEVNHG----NEDTFREMLRIKRSVSASYSQTHFILP---EYLMQKDQR 783
W + +FE+ + +R++L+ + V S F L E + K ++
Sbjct: 513 MPEVLWKSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQ 572
Query: 784 LSIDDAKDKLKQAGVHEDEMAALERQLAPAANNGNAKDSSRKVGFVSAGVESQ-----TD 838
+ ++A ++ E+ + LE + G D R + V+ + D
Sbjct: 573 I-YEEANKTMRNCEEKEERLMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQADD 631
Query: 839 GGIKTTANHEDIELPDESDSEEEEKVEIAQKDVPSAVYGGLARKREGSEEDGDNSAD 895
G + D P+++ ++ K+ K ++ ++RE +E+D D D
Sbjct: 632 GSDAGWEEYYDYIFPEDAANQPNLKLLAMAK-----LWKKQQQEREAAEQDPDKDID 683
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
W Y EESL ++ R++YER LD+ + + YA + +++ A +++R +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 578 IFKYPHVKDIW--VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEE 635
P V W TY+ + + + AR++FE +E P + + Y E
Sbjct: 144 TL--PRVNQFWYKYTYMEEML-----GNVAGARQVFERWMEWQPEEQA---WHSYINFEL 193
Query: 636 DYGLAKRAMKVYDQ---ATKAVPNHEKLGMYE---IYIARAAEIFGVPKTREIYEQAIES 689
Y +RA +Y++ AV N K +E Y A A R++YE+A+E
Sbjct: 194 RYKEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHA---------RKVYERAVEF 244
Query: 690 GLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNE 749
+ + + + +A+ E++ E +R R IY +A + E + + FE G+
Sbjct: 245 FGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDR 304
Query: 750 DTFREMLRIKR 760
+++ KR
Sbjct: 305 RGIEDIIVSKR 315
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 60/434 (13%)
Query: 252 WTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKP--DL 309
W S ++ +R + E+AR I+E ++ V+++ Y++FEE A+ +
Sbjct: 185 WHSYINFELRYKEVERARTIYERFVLVHPAVKNWI----KYARFEEKHAYFAHARKVYER 240
Query: 310 SVE---EEEDDE---------EHGSAEDEDIRLDVNLSMAEFVKK----VLNGFWLHDVK 353
+VE +E DE E E E +R+ ++ K+ + + + + K
Sbjct: 241 AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK 300
Query: 354 DVDLRLARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVR 411
D R +E ++ + ++ NPHN + W +++ E + + Y A+
Sbjct: 301 FGDRR--GIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIA 358
Query: 412 TVDPMKAVGKPH-----TLWVAFAKLYETY--KDIANARVIFDKAVQVNYKTVDHLASIW 464
V P++ K H LWV +A LYE KD R ++ ++++ A +W
Sbjct: 359 NVPPIQE--KRHWKRYIYLWVNYA-LYEELEAKDPERTRQVYQASLELIPHKKFTFAKMW 415
Query: 465 CEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDL 524
+A+ E+R KN L RRA + G P + KL K Y++L
Sbjct: 416 LYYAQFEIRQKN----LPFARRALG----------TSIGKCP-KNKLFKG------YIEL 454
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHV 584
E L + R +YE+ L+ I +A L E A +YE + +
Sbjct: 455 ELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMP 514
Query: 585 KDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAM 644
+ +W +Y+ ++ + + ER R L+ ++ V + Q+ G +
Sbjct: 515 EVLWKSYIDFEIE---QEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCR 571
Query: 645 KVYDQATKAVPNHE 658
++Y++A K + N E
Sbjct: 572 QIYEEANKTMRNCE 585
Score = 38.1 bits (87), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E + + +ERAL ++ +W+ Y E + + AR +DRA+ LP ++ W
Sbjct: 96 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRV--NQFWY 153
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSH--IEDFIEFLVKSKLWQEAAERLASVLNDD 200
Y E G + + +V+ R++++ P +I F ++ K ER ++ +
Sbjct: 154 KYTYMEEMLG-NVAGARQVFERWMEWQPEEQAWHSYINFELRYK----EVERARTIY--E 206
Query: 201 QFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV--GRLWTSLADY 258
+F + K+ W++ HA + + + F DE L+ + A +
Sbjct: 207 RFVLVHPAVKN--WIKYARFEEKHAY---FAHARKVYERAVEFFGDEHMDEHLYVAFAKF 261
Query: 259 YIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
++ FE+ R I++ + ++ ++ +F +Y+ FE
Sbjct: 262 EENQKEFERVRVIYKYA-LDRISKQEAQELFKNYTIFE 298
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 121/290 (41%), Gaps = 59/290 (20%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALP--GSYKLW--HAYLIER 70
YEEE+ NP + W+ YL + + +A +YERA+ +P + W + YL
Sbjct: 319 YEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVN 378
Query: 71 LSIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFD 126
++ + L P E ++ +L + HK ++W+ Y + QK + ARR
Sbjct: 379 YALYEELEAKDP--ERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRALG 436
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLW 186
++ P +++++ Y+ +E + + ++Y ++L++ P + +I+F
Sbjct: 437 TSIGKCP---KNKLFKGYIE-LELQLREFDRCRKLYEKFLEFGPENCTSWIKFA------ 486
Query: 187 QEAAERLASVLNDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTD 246
L ++L D +E + A L++ +
Sbjct: 487 -----ELETILGD---------------IERARAIYELAISQPRLDMPEV---------- 516
Query: 247 EVGRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
LW S D+ I +E E+ R+++ + + V+ ++ S++QFE
Sbjct: 517 ----LWKSYIDFEIEQEETERTRNLYRQLLQRTQHVK----VWISFAQFE 558
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 169/367 (46%), Gaps = 51/367 (13%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ E+ K+I AR I+++A+ V+Y+ + ++W ++AEME++++ A +
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNI----TLWLKYAEMEMKNRQVNHARNIWD 300
Query: 486 RA-TAEPSV-----------EVRRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGN 530
RA T P V E+ VA G V M+ + W Y++ E
Sbjct: 301 RAITTLPRVNQFWYKYTYMEEMLGNVA--GARQVFERWMEWQPEEQAWHSYINFELRYKE 358
Query: 531 LESTRAVYERILDLRIATPQI--IINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIW 588
++ R +YER + + P + I YA E+H YF A +VYER V+ F H+ +
Sbjct: 359 VDRARTIYERFV---LVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHL 415
Query: 589 VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------L 639
+KF + + + ER R +++ A++ + L+ Y E+ +G +
Sbjct: 416 YVAFAKFEE--NQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIV 473
Query: 640 AKRAMKVYDQATKAVP-NHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKA 698
+KR + Y++ KA P N++ Y + AE V RE+YE+AI + P ++ +
Sbjct: 474 SKRRFQ-YEEEVKANPHNYDAWFDYLRLVESDAEAEAV---REVYERAIANVPPIQEKRH 529
Query: 699 ------MCLKYAELEK-SLGEIDRARGIYVFASQFADPRSDT--EFWNRWHEFEVNHGNE 749
+ + YA E+ + +R R +Y + + + T + W + +FE+ N
Sbjct: 530 WKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNL 589
Query: 750 DTFREML 756
R L
Sbjct: 590 SLARRAL 596
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 124/547 (22%), Positives = 217/547 (39%), Gaps = 113/547 (20%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W ++ YK++ AR I+++ V V+ + W ++A E +H F A ++
Sbjct: 346 WHSYINFELRYKEVDRARTIYERFVLVHPDVKN-----WIKYARFEEKHAYFAHARKVYE 400
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RA V G+E H L+ + EE+ E R +Y+ LD R
Sbjct: 401 RA-----------VEFFGDE------HMDEHLYVAFAKFEENQKEFERVRVIYKYALD-R 442
Query: 546 IA---TPQIIINYALL---LEEHKYFEDAF---RVYERGVKIFKYPHVKDIWVTYLSKFV 596
I+ ++ NY + + + ED R ++ ++ PH D W YL + V
Sbjct: 443 ISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYL-RLV 501
Query: 597 KRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGL--------AKRAMKVYD 648
+ + E RE++E A+ P K + +Y L +Y L +R +VY
Sbjct: 502 E--SDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQ 559
Query: 649 QATKAVPNHEKLGMYEIYI-----------------ARAAEIFGVPK------------- 678
+ + +P H+K +++I A I PK
Sbjct: 560 ASLELIP-HKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQ 618
Query: 679 ------TREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSD 732
R++YE+ +E G P+ +K+AELE LG+IDRAR IY A + PR D
Sbjct: 619 LREFDRCRKLYEKFLEFG-PENCTS--WIKFAELETILGDIDRARAIYELA--ISQPRLD 673
Query: 733 TE--FWNRWHEFEVNH----GNEDTFREMLRIKRSVSASYSQTHFILP---EYLMQKDQR 783
W + +FE+ + +R +L+ + V S F L E + K ++
Sbjct: 674 MPEVLWKSYIDFEIEQEETERTRNLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQ 733
Query: 784 LSIDDAKDKLKQAGVHEDEMAALERQLAPAANNGNAKDSSRKVGFVSAGVES----QTDG 839
+ ++A ++ E+ + LE + G A D R + V+ QTD
Sbjct: 734 I-YEEANKTMRNCEEKEERLMLLESWRSFEEEFGTASDKERVDKLMPEKVKKRRKVQTDD 792
Query: 840 GIKTTANHE---DIELPDESDSEEEEKVEIAQKDVPSAVYGGLARKREGSEEDGDNSADA 896
G + A E D P+++ + Q ++ L +K++ +ED ++ D
Sbjct: 793 G--SDAGWEEYFDYIFPEDAAN---------QPNLKLLAMAKLWKKQQQEKEDAEHHPDE 841
Query: 897 NGKDGES 903
+ + ES
Sbjct: 842 DVDESES 848
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 15/245 (6%)
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
W Y EESL ++ R++YER LD+ + + YA + +++ A +++R +
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Query: 578 IFKYPHVKDIW--VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEE 635
P V W TY+ + + + AR++FE +E P + + Y E
Sbjct: 305 TL--PRVNQFWYKYTYMEEML-----GNVAGARQVFERWMEWQPEEQA---WHSYINFEL 354
Query: 636 DYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKD 695
Y RA +Y++ P+ + Y + + A R++YE+A+E +
Sbjct: 355 RYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHAYF---AHARKVYERAVEFFGDEHM 411
Query: 696 VKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREM 755
+ + + +A+ E++ E +R R IY +A + E + + FE G+ ++
Sbjct: 412 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDI 471
Query: 756 LRIKR 760
+ KR
Sbjct: 472 IVSKR 476
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 36/290 (12%)
Query: 378 LRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTVDPMKAVGKPH-----TLWVAFA 430
++ NPHN + W +++ E + + + Y A+ V P++ K H LW+ +A
Sbjct: 484 VKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQE--KRHWKRYIYLWINYA 541
Query: 431 KLYETY--KDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRAT 488
LYE KD R ++ ++++ A +W +A+ E+R KN L L RRA
Sbjct: 542 -LYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKN----LSLARRAL 596
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIAT 548
+ G P +L+ Y++LE L + R +YE+ L+
Sbjct: 597 G----------TSIGKCPKN-------KLFKVYIELELQLREFDRCRKLYEKFLEFGPEN 639
Query: 549 PQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERAR 608
I +A L + A +YE + + + +W +Y+ ++ + + ER R
Sbjct: 640 CTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFEIE---QEETERTR 696
Query: 609 ELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHE 658
L+ ++ V + Q+ G + ++Y++A K + N E
Sbjct: 697 NLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCE 746
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYKLWH----AYLIER 70
YEEE+ NP + W+ YL + + +A + +YERA+ +P + H YL
Sbjct: 480 YEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWIN 539
Query: 71 LSIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFD 126
++ + L P E ++ +L + HK ++WI+Y + QK ++ ARR
Sbjct: 540 YALYEELEAKDP--ERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALG 597
Query: 127 RALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
++ P ++++++Y+ +E + + ++Y ++L++ P + +I+F
Sbjct: 598 TSIGKCP---KNKLFKVYIE-LELQLREFDRCRKLYEKFLEFGPENCTSWIKF 646
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E + + +ERAL ++ +W+ Y E + + AR +DRA+ LP ++ W
Sbjct: 257 EIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRV--NQFWY 314
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSH--IEDFIEFLVKSKLWQEAAERLASVLNDD 200
Y E G + + +V+ R++++ P +I F ++ K +R ++ +
Sbjct: 315 KYTYMEEMLG-NVAGARQVFERWMEWQPEEQAWHSYINFELRYK----EVDRARTIY--E 367
Query: 201 QFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV--GRLWTSLADY 258
+F + K+ W++ HA + + + F DE L+ + A +
Sbjct: 368 RFVLVHPDVKN--WIKYARFEEKHAY---FAHARKVYERAVEFFGDEHMDEHLYVAFAKF 422
Query: 259 YIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFE 296
++ FE+ R I++ + ++ +D +F +Y+ FE
Sbjct: 423 EENQKEFERVRVIYKYA-LDRISKQDAQELFKNYTIFE 459
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 58/332 (17%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ K+ A +R +F++A+ ++ V ++W + E EL+ +N A L+
Sbjct: 75 WLQYAQWELEQKEYARSRSVFERALNLHANKV----TLWIRYVEAELKSRNINFARNLLD 130
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V+ +LW YV +EE LGN+ R V+ER ++
Sbjct: 131 RAVTHLPRVD---------------------KLWYKYVWVEEMLGNIPGVRQVFERWMEW 169
Query: 545 RIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFK-----YPHVKDIWVTYLSKFVKRY 599
+ P A + E +Y E Y+R +IF +P ++ W+ + SKF + Y
Sbjct: 170 Q---PDEAAWSAFIKLEQRYGE-----YDRAREIFTRFTMVHPEPRN-WIKW-SKFEEEY 219
Query: 600 GKTKLERARELFENAVE--TAPADAV--KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVP 655
G + +R RE+FE A+E + D + L++ YA+ E RA +Y + +P
Sbjct: 220 GTS--DRVREVFERAIEELSKYGDEFVEERLFIAYARYEAKLHDLDRARAIYKFGLENLP 277
Query: 656 NHEKLGMYEIYIA--------RAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELE 707
+ + +++ Y E + K R YE + + DV YA LE
Sbjct: 278 RSKAMLLHKEYTTFEKQYGDREGVEDVVLSKRRRHYEDLVRENPKNYDV---WFDYARLE 334
Query: 708 KSLGEIDRARGIYVFASQFADPRSDTEFWNRW 739
++ G+IDR R +Y A P W R+
Sbjct: 335 EASGDIDRTREVYEKAIAQVPPTQAKRHWRRY 366
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 78/382 (20%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W AF KL + Y + AR IF + V+ + + W +W++ E + E+
Sbjct: 176 WSAFIKLEQRYGEYDRAREIFTRFTMVHPEPRN-----WIKWSKFEEEYGTSDRVREVFE 230
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RA E ++ G+E V+ RL+ Y E L +L+ RA+Y+ L+
Sbjct: 231 RAIEE--------LSKYGDEFVEE------RLFIAYARYEAKLHDLDRARAIYKFGLENL 276
Query: 546 IATPQIIINYALLLEEHKY-----FEDAF-----RVYERGVKIFKYPHVKDIWVTYLSKF 595
+ ++++ E +Y ED R YE V+ + P D+W Y ++
Sbjct: 277 PRSKAMLLHKEYTTFEKQYGDREGVEDVVLSKRRRHYEDLVR--ENPKNYDVWFDY-ARL 333
Query: 596 VKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKL--------EEDYGLAKRAMKVY 647
+ G ++R RE++E A+ P K + +Y L E + +RA +VY
Sbjct: 334 EEASGD--IDRTREVYEKAIAQVPPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVY 391
Query: 648 DQATKAVPNHE----KLGMYEIY-------IARAAEIFG-----VPKTR------EIYEQ 685
D K +P+ K+ M++ + +A A + G PK R E+ ++
Sbjct: 392 DTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAARKTLGRAIGMCPKDRLFKGYIEMEQK 451
Query: 686 AIESG----LPDKDV---KAMC---LKYAELEKSLGEIDRARGIYVFASQFADPRSDTE- 734
E G L +K + A C +K+AELE+ L ++DRAR I A P D
Sbjct: 452 LYEFGRCRILYEKHIAYNPANCSTWVKWAELERGLDDLDRARAILDMG--IAQPVLDMPE 509
Query: 735 -FWNRWHEFEVNHGNEDTFREM 755
W + +FE G D R +
Sbjct: 510 VVWKSYIDFEEEEGEYDKTRSL 531
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 18/252 (7%)
Query: 514 SLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYE 573
+L+ W Y E +R+V+ER L+L + I Y + + A + +
Sbjct: 71 NLKNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLD 130
Query: 574 RGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKL 633
R V P V +W Y+ +V+ + R++FE +E P +A + + KL
Sbjct: 131 RAVTHL--PRVDKLWYKYV--WVEEM-LGNIPGVRQVFERWMEWQPDEAA---WSAFIKL 182
Query: 634 EEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVP-KTREIYEQAIE--SG 690
E+ YG RA +++ + T P I ++ E +G + RE++E+AIE S
Sbjct: 183 EQRYGEYDRAREIFTRFTMVHPEPRNW----IKWSKFEEEYGTSDRVREVFERAIEELSK 238
Query: 691 LPDKDVKA-MCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNR-WHEFEVNHGN 748
D+ V+ + + YA E L ++DRAR IY F + PRS ++ + FE +G+
Sbjct: 239 YGDEFVEERLFIAYARYEAKLHDLDRARAIYKFGLENL-PRSKAMLLHKEYTTFEKQYGD 297
Query: 749 EDTFREMLRIKR 760
+ +++ KR
Sbjct: 298 REGVEDVVLSKR 309
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 147/359 (40%), Gaps = 62/359 (17%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
TLW+ + + ++I AR + D+AV + VD L W ++ +E N G ++
Sbjct: 107 TLWIRYVEAELKSRNINFARNLLDRAV-THLPRVDKL---WYKYVWVEEMLGNIPGVRQV 162
Query: 484 MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
R M+ W+ ++ LE+ G + R ++ R
Sbjct: 163 FER---------------------WMEWQPDEAAWSAFIKLEQRYGEYDRAREIFTRFTM 201
Query: 544 LRIATPQIIINYALLLEEHKYFEDAFRVYERGV-KIFKYPH---VKDIWVTYLSKFVKRY 599
+ P+ I ++ EE+ + V+ER + ++ KY + +++ Y K +
Sbjct: 202 VH-PEPRNWIKWSKFEEEYGTSDRVREVFERAIEELSKYGDEFVEERLFIAYARYEAKLH 260
Query: 600 GKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LAKRAMKVYDQA 650
L+RAR +++ +E P L+ +Y E+ YG L+KR + Y+
Sbjct: 261 D---LDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYGDREGVEDVVLSKR-RRHYEDL 316
Query: 651 TKAVPNHEKLGMYEIYI--ARAAEIFG-VPKTREIYEQAIESGLPDKDVKAMCLKYAEL- 706
+ P + Y+++ AR E G + +TRE+YE+AI + +P K +Y L
Sbjct: 317 VRENPKN-----YDVWFDYARLEEASGDIDRTREVYEKAI-AQVPPTQAKRHWRRYIYLW 370
Query: 707 -------EKSLGEIDRARGIYVFASQFADPRSDT--EFWNRWHEFEVNHGNEDTFREML 756
E +RAR +Y + R+ T + W FE+ G+ R+ L
Sbjct: 371 IFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAARKTL 429
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 27/126 (21%)
Query: 431 KLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAE 490
KLYE R++++K + N S W +WAE+E + A ++ A+
Sbjct: 451 KLYE----FGRCRILYEKHIAYNPANC----STWVKWAELERGLDDLDRARAILDMGIAQ 502
Query: 491 PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQ 550
P +++ V W Y+D EE G + TR++YER+LD + P+
Sbjct: 503 PVLDMPEVV------------------WKSYIDFEEEEGEYDKTRSLYERLLD-KADHPK 543
Query: 551 IIINYA 556
+ I+YA
Sbjct: 544 VWISYA 549
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ EY + FERAL +WI Y+E + I AR DRA+ LP D
Sbjct: 83 LEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRAVTHLPRV--D 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
++W Y+ +VE+ I +V+ R++++ P
Sbjct: 141 KLWYKYV-WVEEMLGNIPGVRQVFERWMEWQP 171
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ K+ AR +F++A+ V+ V +W + E E++ +N A L+
Sbjct: 75 WMRYAQWELEQKEFRRARSVFERALDVDPTAV----VLWIRYIEAEMKTRNINHARNLLD 130
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RA V + RV +LW YV +EE LGN+ TR V+ER +
Sbjct: 131 RA-----VTIYSRVD---------------KLWYKYVYMEEMLGNIPGTRQVFERWMSW- 169
Query: 546 IATPQIIINYALLLEEHKY--FEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTK 603
P A + E +Y F+ ++ER + +P K+ W+ + ++F + YG +
Sbjct: 170 --EPDEGAWGAYIKLEKRYNEFDRVRAIFERFTVV--HPEPKN-WIKW-ARFEEEYGTSD 223
Query: 604 LERARELFENAVETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGM 662
+ RE++ A+ET D + + L++ YA+ E +RA +Y A +P + + +
Sbjct: 224 M--VREVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVAL 281
Query: 663 YEIYIARAAEIFG---------VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEI 713
++ Y + FG + K R YE+ I+ + D+ + LE+S G++
Sbjct: 282 HKAYTTFEKQ-FGDREGVEDVILSKRRVQYEEQIKENPKNYDI---WFDFVRLEESSGDV 337
Query: 714 DRARGIYVFASQFADPRSDTEFWNRW 739
+R R +Y A P + W R+
Sbjct: 338 ERVRDVYERAIAQMPPSQEKRHWRRY 363
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 102/495 (20%), Positives = 178/495 (35%), Gaps = 130/495 (26%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W A+ KL + Y + R IF++ + V W +WA E + G +++R
Sbjct: 176 WGAYIKLEKRYNEFDRVRAIFER-----FTVVHPEPKNWIKWARFEEEY----GTSDMVR 226
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
+ G + + KL + Y E L E RA+Y+ LD
Sbjct: 227 EVYGLA-------IETLGEDFMDEKLFIA------YARYEAKLKEFERARAIYKYALDRL 273
Query: 546 IATPQIIINYALLLEEHKY-----FEDAF----RV-YERGVKIFKYPHVKDIWVTYLSKF 595
+ ++ A E ++ ED RV YE +K + P DIW ++ +
Sbjct: 274 PRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQIK--ENPKNYDIWFDFV-RL 330
Query: 596 VKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGL--------AKRAMKVY 647
+ G +ER R+++E A+ P K + +Y L Y L +RA ++Y
Sbjct: 331 EESSG--DVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEAKDMERAHQIY 388
Query: 648 DQATKAVPNHEKLGMYEIYIARAA------------------------------------ 671
+ + +P H+K +I++ +A
Sbjct: 389 QECIRLIP-HKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKLFKGYIDLER 447
Query: 672 EIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRS 731
++F + R+++E+ IE + +K+AELE+ L +IDRAR IY + P
Sbjct: 448 QLFEFVRCRKLFEKQIEWSPSNCQA---WIKFAELERGLDDIDRARAIYELG--ISQPVL 502
Query: 732 DTE--FWNRWHEFEVNHGNEDTFREML--------------------------------- 756
D W + +FE G D R +
Sbjct: 503 DMPELLWKSYIDFEEYEGEYDRTRALYERLLEKTNHVKVWINFARFEINIPEGEEEDEDE 562
Query: 757 -------RIKRSVSASYSQTHFILPEYLMQKDQRLSIDDAKDKLKQAGVHEDEMAALERQ 809
KR + + H + E M K++R+++ +A +Q D++A +ERQ
Sbjct: 563 EEKPVSEEAKRRARMVFERAHKVFKEKEM-KEERVALLNAWKSFEQTHGSPDDIAKIERQ 621
Query: 810 LAPAANNGNAKDSSR 824
+ D R
Sbjct: 622 MPSKVKKRRKLDDDR 636
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 17/253 (6%)
Query: 514 SLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYE 573
S+ W Y E R+V+ER LD+ + I Y + + A + +
Sbjct: 71 SMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLD 130
Query: 574 RGVKIFKYPHVKDIWV--TYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYA 631
R V I Y V +W Y+ + + T R++FE + P + + Y
Sbjct: 131 RAVTI--YSRVDKLWYKYVYMEEMLGNIPGT-----RQVFERWMSWEPDEGA---WGAYI 180
Query: 632 KLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPK-TREIYEQAIESG 690
KLE+ Y R ++++ T P + I AR E +G RE+Y AIE+
Sbjct: 181 KLEKRYNEFDRVRAIFERFTVVHPEPKNW----IKWARFEEEYGTSDMVREVYGLAIETL 236
Query: 691 LPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNED 750
D + + + YA E L E +RAR IY +A + FE G+ +
Sbjct: 237 GEDFMDEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDRE 296
Query: 751 TFREMLRIKRSVS 763
+++ KR V
Sbjct: 297 GVEDVILSKRRVQ 309
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 101/506 (19%), Positives = 212/506 (41%), Gaps = 70/506 (13%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +WI Y+E + I AR DRA+ ++ D
Sbjct: 83 LEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAVTIY--SRVD 140
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLN 198
++W Y+ E G I + +V+ R++ ++P + ++ K + E +R+ ++
Sbjct: 141 KLWYKYVYMEEMLG-NIPGTRQVFERWMSWEPDE-GAWGAYIKLEKRYNEF-DRVRAIF- 196
Query: 199 DDQFYSIKGKTKHRLWLELCDLLTTHAT-----EISGLNVDAIIRGGIRKFTDEVGRLWT 253
++F + + K+ W++ + T E+ GL ++ + F DE +L+
Sbjct: 197 -ERFTVVHPEPKN--WIKWARFEEEYGTSDMVREVYGLAIETLGED----FMDE--KLFI 247
Query: 254 SLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQF----------EEIMVSAK 303
+ A Y + + FE+AR I++ + + + + + +Y+ F E++++S +
Sbjct: 248 AYARYEAKLKEFERARAIYKYALDRLPRAKSVA-LHKAYTTFEKQFGDREGVEDVILSKR 306
Query: 304 MAKPDLSVEEEEDDE---------EHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKD 354
+ + ++E + E S + E +R ++A+ W +
Sbjct: 307 RVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIY- 365
Query: 355 VDLRLARLEHLMNRRPELANSV---LLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVR 411
+ + A E L + E A+ + +R PH + + + + + + + A +
Sbjct: 366 LWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAK-IWLMKAQFEIRQMDLQAARK 424
Query: 412 TVDPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEME 471
T+ L+ + L + R +F+K ++ + W ++AE+E
Sbjct: 425 TLGHAIGACPKDKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSN----CQAWIKFAELE 480
Query: 472 LRHKNFKGALELMR-RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGN 530
+G ++ R RA E + ++PV L LW Y+D EE G
Sbjct: 481 ------RGLDDIDRARAIYELGI----------SQPV---LDMPELLWKSYIDFEEYEGE 521
Query: 531 LESTRAVYERILDLRIATPQIIINYA 556
+ TRA+YER+L+ + ++ IN+A
Sbjct: 522 YDRTRALYERLLE-KTNHVKVWINFA 546
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 10 SEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV-IYERALKALPGSYK------- 61
S+ + YEE++ NP + +W+ ++ + + +R +YERA+ +P S +
Sbjct: 304 SKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRY 363
Query: 62 --LWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFIT 119
LW Y + K++ H Y+ T K IW+M + Q +
Sbjct: 364 IYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAK---IWLMKAQFEIRQMDLQ 420
Query: 120 KARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
AR+T A+ A P D++++ Y+ +E++ +++ + +++ PS+ + +I+F
Sbjct: 421 AARKTLGHAIGACP---KDKLFKGYID-LERQLFEFVRCRKLFEKQIEWSPSNCQAWIKF 476
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN S+ W RY + E F++ ++ERAL P + LW Y+ + +
Sbjct: 61 FEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYI---EAEM 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP 133
K I H N +RA+ ++ ++W Y+ I R+ F+R + P
Sbjct: 118 KTRNINHA-----RNLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEP 171
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 166/415 (40%), Gaps = 63/415 (15%)
Query: 422 PHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKN----- 476
P T W A+ + + Y++ AR I + Y TV A W +WA+ E+ N
Sbjct: 166 PVTAWAAYVNMEKRYREFDRARGILRR-----YVTVHPGAPAWNKWAKFEMEAGNRDTVR 220
Query: 477 -------------FKGALELMRRA--TAEPSVEVRRRVAADGNEPVQMKLHK-----SLR 516
G ++ + + S E R R L K S +
Sbjct: 221 EVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREYERARALYTYGLEKLPKSKSAK 280
Query: 517 LWTFYVDLEESLGNLEST--------RAVYERILDLRIATPQIIINYALLLEEHKYFEDA 568
L+ Y E+ G E R+ YE L A +Y L +E D
Sbjct: 281 LYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSYITLGQESGLEADQ 340
Query: 569 FR-VYERGVKIFKYPHVKDIWVTYLSKFVK-----RYGKTKLERARELFENAVETAPAD- 621
R ++ER V PH K +W Y+ ++K ++E+ARE+++ + P
Sbjct: 341 IREIFERAVSNVP-PHSKRLWRRYIFLWIKYAIWEELENKEVEKAREIYKTCISIIPHKK 399
Query: 622 -AVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTR 680
++L +AK E +G A K+ + K +Y+ YIA A++ + R
Sbjct: 400 FTFAKVWLLWAKFEIRHGNLPEARKILGRGLGMSGG--KPALYKGYIALEAKLREFDRCR 457
Query: 681 EIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWH 740
++Y++ +E + A ++YAELE+ LG+ +RAR I+ A + W R+
Sbjct: 458 KLYDKYVEKFA---EFAAPWMEYAELEQMLGDEERARAIFELAVSQPEMEMPELVWKRFI 514
Query: 741 EFEVNHGNEDTFREMLR--IKRS-----VSASYSQTHFILPEYLMQKDQRLSIDD 788
EFE N D R + R + R+ V S++Q +P +DQ L +D
Sbjct: 515 EFEAEEENYDRARAIYRQLLDRTHGHIKVWISFAQFEVTVP----AEDQELQYND 565
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 156/393 (39%), Gaps = 97/393 (24%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ ++ A AR +F++A++VN V W + + EL+ KN A L+
Sbjct: 69 WMRYAQWELEQREFARARSVFERALEVNSTHV----PTWIRYIQCELKEKNINHARNLLD 124
Query: 486 RA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA T P V+ +LW YV EE+LGN+ RAV+ER +
Sbjct: 125 RAVTLLPRVD---------------------KLWFTYVATEETLGNIAGCRAVFERWMHW 163
Query: 545 RIATPQIIINYALLLEEHKY--FEDAFRVYERGVKIFKYPHVKDIWVTY----------- 591
R P + A + E +Y F+ A + R V + + W +
Sbjct: 164 R---PPVTAWAAYVNMEKRYREFDRARGILRRYVTVHPGAPAWNKWAKFEMEAGNRDTVR 220
Query: 592 ----------------------------LSKFVKRYGKTKLERARELFENAVETAPADAV 623
+ F R+ + ERAR L+ +E P
Sbjct: 221 EVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRH--REYERARALYTYGLEKLPKSKS 278
Query: 624 KPLYLQYAKLEEDYG---------LAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIF 674
LY Y E+ YG L KR K DQ + +++ Y I + + + +
Sbjct: 279 AKLYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSY-ITLGQESGL- 336
Query: 675 GVPKTREIYEQAIESGLPDKDVKA------MCLKYA---ELEKSLGEIDRARGIYVFASQ 725
+ REI+E+A+ S +P + + +KYA ELE E+++AR IY
Sbjct: 337 EADQIREIFERAV-SNVPPHSKRLWRRYIFLWIKYAIWEELENK--EVEKAREIYKTCIS 393
Query: 726 FADPRSDT--EFWNRWHEFEVNHGNEDTFREML 756
+ T + W W +FE+ HGN R++L
Sbjct: 394 IIPHKKFTFAKVWLLWAKFEIRHGNLPEARKIL 426
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 110/554 (19%), Positives = 215/554 (38%), Gaps = 132/554 (23%)
Query: 83 EYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWE 142
E+ + FERAL WI Y++ +K I AR DRA+ LP D++W
Sbjct: 81 EFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRV--DKLWF 138
Query: 143 IYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLNDDQF 202
Y+ E G I V+ R++ + P + + ++ K ++E +R +L ++
Sbjct: 139 TYVATEETLG-NIAGCRAVFERWMHWRPP-VTAWAAYVNMEKRYREF-DRARGILR--RY 193
Query: 203 YSIK-GKTKHRLW--LELCDLLTTHATEISGLNVDAII---RGGIRKFTDEVGRLWTSLA 256
++ G W E+ E+ L +D ++ GG+ F DE L A
Sbjct: 194 VTVHPGAPAWNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGV-DFLDES--LLAGWA 250
Query: 257 DYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSVEEEED 316
+ R +E+AR ++ G+ + + + ++ Y+ F
Sbjct: 251 SFETRHREYERARALYTYGLEKLPKSKS-AKLYADYTAF--------------------- 288
Query: 317 DEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRPELANSV 376
++++G+ E ++ V+ L RR + +
Sbjct: 289 EKQYGAKEG--------------IENVV--------------------LTKRRSKYEDQ- 313
Query: 377 LLRQNPHNVEQWHRRVKI-----FEGNPTKQILTYTEAVRTVDP-MKAVGKPHT-LWVAF 429
L+++P + + W + + E + ++I + AV V P K + + + LW+ +
Sbjct: 314 -LKEDPADYDTWFSYITLGQESGLEADQIREI--FERAVSNVPPHSKRLWRRYIFLWIKY 370
Query: 430 AKLYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRAT 488
A E K++ AR I+ + + A +W WA+ E+RH N A +++ R
Sbjct: 371 AIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRG- 429
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRL-------------------------WTFYVD 523
+ G +P K + +L W Y +
Sbjct: 430 ----------LGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAE 479
Query: 524 LEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFK--- 580
LE+ LG+ E RA++E L ++ P++ + L+ + FE Y+R I++
Sbjct: 480 LEQMLGDEERARAIFE----LAVSQPEMEMP-ELVWKRFIEFEAEEENYDRARAIYRQLL 534
Query: 581 ---YPHVKDIWVTY 591
+ H+K +W+++
Sbjct: 535 DRTHGHIK-VWISF 547
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 37/245 (15%)
Query: 516 RLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERG 575
++W + E GNL R + R L + P + Y L + + F+ ++Y++
Sbjct: 404 KVWLLWAKFEIRHGNLPEARKILGRGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKY 463
Query: 576 VKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAV---ETAPADAVKPLYLQYAK 632
V+ K+ W+ Y ++ + G ERAR +FE AV E + V ++++
Sbjct: 464 VE--KFAEFAAPWMEY-AELEQMLGDE--ERARAIFELAVSQPEMEMPELVWKRFIEFEA 518
Query: 633 LEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLP 692
EE+Y RA +Y Q H K ++I+ A E +P
Sbjct: 519 EEENYD---RARAIYRQLLDRTHGHIK-----VWISFAQ---------------FEVTVP 555
Query: 693 DKDVKAMCLKYAELEKSLGEIDRARGIYVFASQF-----ADPRSD-TEFWNRWHEFEVNH 746
+D + E E + E +AR +F + A+ R + + W EFE H
Sbjct: 556 AEDQELQYNDEGEAEIEVTEEAKARARSIFGEAWDALKAANKREERVVLFESWREFEEEH 615
Query: 747 GNEDT 751
G++ +
Sbjct: 616 GDDKS 620
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 21/193 (10%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFV--IYERALKALPG-SYKLWHAYLIERLS 72
YE++L +P W+ Y+ +E+ + + I+ERA+ +P S +LW Y+ +
Sbjct: 310 YEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIK 369
Query: 73 IVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDRA 128
+ + E E ++ + + HK ++W+++ + + +AR+ R
Sbjct: 370 YAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRG 429
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQE 188
L +++ Y I +E LR + R K ++E F EF W E
Sbjct: 430 LGM--SGGKPALYKGY--------IALEAKLREFDRCRKLYDKYVEKFAEFAAP---WME 476
Query: 189 AAERLASVLNDDQ 201
AE L +L D++
Sbjct: 477 YAE-LEQMLGDEE 488
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 144/328 (43%), Gaps = 49/328 (14%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ K+ A AR +F++A+ V+ +W + + E++++N A L+
Sbjct: 75 WLQYAQWELEQKEFARARSVFERALDVHPNNT----QLWIRYVQAEIKNRNINHARNLLD 130
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RA +L + LW Y+ + E LG++ TR V++R + +
Sbjct: 131 RAVT--------------------RLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQ 170
Query: 546 IATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLE 605
Q Y L + + F+ A ++ + P W+ + +KF + YG + +
Sbjct: 171 -PDEQAWSAYIRLEKRYGEFDRAREIFRAFTAVHPEPRT---WLKW-AKFEEEYGTS--D 223
Query: 606 RARELFENAV----ETAPADAV-KPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKL 660
RE+F+ A+ ET DAV + +++ +A+ E +RA +Y +P + +
Sbjct: 224 TVREVFQTAIQTIAETLGDDAVDERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSM 283
Query: 661 GMYEIYIARAAEIFG---------VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLG 711
++ Y + FG + K R +YE+ ++ + DV +A LE+S G
Sbjct: 284 TLHAHYTTFEKQ-FGDKEGVEDVILTKRRRLYEEQVKENAKNYDV---WFDFARLEESGG 339
Query: 712 EIDRARGIYVFASQFADPRSDTEFWNRW 739
++DR R +Y A P + W R+
Sbjct: 340 DVDRTREVYERAIAQVPPTQEKRHWRRY 367
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 606 RARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEI 665
RAR +FE A++ P + L+++Y + E A + D+A +P L +
Sbjct: 90 RARSVFERALDVHPNNT--QLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTSLWYQYL 147
Query: 666 YIARAAEIFG-VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIY-VFA 723
Y+ E+ G +P TR+++++ ++ PD+ + Y LEK GE DRAR I+ F
Sbjct: 148 YVM---EMLGDIPGTRQVFDRWMK-WQPDEQAWSA---YIRLEKRYGEFDRAREIFRAFT 200
Query: 724 SQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR 757
+ +PR+ W +W +FE +G DT RE+ +
Sbjct: 201 AVHPEPRT----WLKWAKFEEEYGTSDTVREVFQ 230
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 143/382 (37%), Gaps = 100/382 (26%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
+LW + + E DI R +FD+ ++ D A W + +E R+ F A E+
Sbjct: 141 SLWYQYLYVMEMLGDIPGTRQVFDRWMKWQ---PDEQA--WSAYIRLEKRYGEFDRAREI 195
Query: 484 MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
R TA +H R W + EE G ++ R V++ +
Sbjct: 196 FRAFTA---------------------VHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQ 234
Query: 544 LRIAT-------PQIIINYALLLEEHKYFEDAFRVYERGVKIFKY-----PHVKDIWV-T 590
T +I I +A +E R YER I+K+ P K + +
Sbjct: 235 TIAETLGDDAVDERIFIAFAR-------YEARLREYERARAIYKFGLDNLPRSKSMTLHA 287
Query: 591 YLSKFVKRYGKTK------LERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAM 644
+ + F K++G + L + R L+E V+ + ++ +A+LEE G R
Sbjct: 288 HYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNY--DVWFDFARLEESGGDVDRTR 345
Query: 645 KVYDQATKAVPNHEKLGMYEIYIA--------RAAEIFGVPKTREIYEQAIESGLPDKDV 696
+VY++A VP ++ + YI E + + R+IY+ + + +P K
Sbjct: 346 EVYERAIAQVPPTQEKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCL-NLIPHKKF 404
Query: 697 K-----------------------------AMCLK------YAELEKSLGEIDRARGIYV 721
MC K Y LE+ L E +R R +Y
Sbjct: 405 TFAKVWVAKAHFEIRQGQLTTARKTLGRAIGMCPKDKIFKEYILLEQKLYEFERCRTLYE 464
Query: 722 FASQFADPRSDTEFWNRWHEFE 743
+ +P ++ + W +W E E
Sbjct: 465 KHVMY-NP-ANCQTWIKWAELE 484
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 127/570 (22%), Positives = 216/570 (37%), Gaps = 113/570 (19%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP-VTQH 137
+ E+ + FERAL ++WI Y++ + I AR DRA+ LP VT
Sbjct: 83 LEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTS- 141
Query: 138 DRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVL 197
+W YL +E G I + +V+ R++K+ P + + ++ K + E +R +
Sbjct: 142 --LWYQYLYVMEMLG-DIPGTRQVFDRWMKWQPDE-QAWSAYIRLEKRYGE-FDRAREIF 196
Query: 198 NDDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVG------RL 251
F ++ + R WL+ + T + V + + I+ + +G R+
Sbjct: 197 R--AFTAVHPEP--RTWLKWAKFEEEYGTSDT---VREVFQTAIQTIAETLGDDAVDERI 249
Query: 252 WTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEEIMVSAKMAKPDLSV 311
+ + A Y R +E+AR I++ G+ + + + + Y+ FE
Sbjct: 250 FIAFARYEARLREYERARAIYKFGLDNLPRSKSMT-LHAHYTTFE--------------- 293
Query: 312 EEEEDDEEHGSAED-EDIRLDVNLSM-AEFVKKVLNGFWLHDVKDVDLRLARLEHL---M 366
++ G E ED+ L + E VK+ + DV ARLE +
Sbjct: 294 ------KQFGDKEGVEDVILTKRRRLYEEQVKENAKNY------DVWFDFARLEESGGDV 341
Query: 367 NRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPHTLW 426
+R E+ + Q P E+ H R IF L A+ K +G+
Sbjct: 342 DRTREVYERAIA-QVPPTQEKRHWRRYIF--------LFLFYAIWEERETKDIGR----- 387
Query: 427 VAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRR 486
AR I+D + + A +W A E+R A + + R
Sbjct: 388 ---------------ARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQGQLTTARKTLGR 432
Query: 487 ATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRI 546
A G P + K+ K Y+ LE+ L E R +YE+ +
Sbjct: 433 AI--------------GMCP-KDKIFKE------YILLEQKLYEFERCRTLYEKHVMYNP 471
Query: 547 ATPQIIINYALLLEEHKYFEDAFRVYERGVK--IFKYPHVKDIWVTYLSKFVKRYGKTKL 604
A Q I +A L E ++E V I P V +W Y+ + + +
Sbjct: 472 ANCQTWIKWAELERGLDDLERTRAIFELAVSQPILDMPEV--VWKAYIDFEEE---EGEY 526
Query: 605 ERARELFENAVETAPADAVKPLYLQYAKLE 634
ER R L+E +E A V ++ YA+ E
Sbjct: 527 ERTRALYERLLEKADHPKV---WISYAQFE 553
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 138/356 (38%), Gaps = 57/356 (16%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
LW+ + + ++I +AR + D+AV + + S+W ++ + + G ++
Sbjct: 108 LWIRYVQAEIKNRNINHARNLLDRAV----TRLPRVTSLWYQYLYVMEMLGDIPGTRQVF 163
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
R MK + W+ Y+ LE+ G + R ++ R
Sbjct: 164 DR---------------------WMKWQPDEQAWSAYIRLEKRYGEFDRAREIF-RAFTA 201
Query: 545 RIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK--T 602
P+ + +A EE+ + V++ ++ D + RY
Sbjct: 202 VHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETLGDDAVDERIFIAFARYEARLR 261
Query: 603 KLERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LAKRAMKVYDQATKA 653
+ ERAR +++ ++ P L+ Y E+ +G L KR ++Y++ K
Sbjct: 262 EYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVILTKR-RRLYEEQVK- 319
Query: 654 VPNHEKLGMYEIY--IARAAEIFG-VPKTREIYEQAIESGLPDKDVKA------MCLKYA 704
E Y+++ AR E G V +TRE+YE+AI P ++ + + L YA
Sbjct: 320 ----ENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRRYIFLFLFYA 375
Query: 705 EL-EKSLGEIDRARGIYVFASQFADPRSDTEFWNRW---HEFEVNHGNEDTFREML 756
E+ +I RAR IY P F W FE+ G T R+ L
Sbjct: 376 IWEERETKDIGRARQIYDTCLNLI-PHKKFTFAKVWVAKAHFEIRQGQLTTARKTL 430
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP-FKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+E+ + RN L W +Y + E F + ++ERAL P + +LW Y+ + +
Sbjct: 61 FEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYV---QAEI 117
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
KN I H N +RA+ + ++ +W YL + I R+ FDR + P
Sbjct: 118 KNRNINHA-----RNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPD 172
Query: 135 TQHDRIWEIYLRFVEQEG 152
Q W Y+R ++ G
Sbjct: 173 EQ---AWSAYIRLEKRYG 187
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 15 LYEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSY--KLWHAYLIERL 71
LYEE++ N + +W+ + + + + +YERA+ +P + + W Y+ L
Sbjct: 313 LYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRRYIFLFL 372
Query: 72 SI-------VKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRT 124
K++ Y+T N T K +W+ Q +T AR+T
Sbjct: 373 FYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAK---VWVAKAHFEIRQGQLTTARKT 429
Query: 125 FDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
RA+ P D+I++ Y+ +EQ+ E +Y +++ Y+P++ + +I++
Sbjct: 430 LGRAIGMCP---KDKIFKEYI-LLEQKLYEFERCRTLYEKHVMYNPANCQTWIKW 480
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 137/326 (42%), Gaps = 63/326 (19%)
Query: 424 TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL 483
TLW+ +A++ K + +AR ++D+AV + + + W ++ ME +N GA ++
Sbjct: 111 TLWLKYAEMEMKNKQVNHARNLWDRAVTI----MPRVNQFWYKYTYMEEMLENVAGARQV 166
Query: 484 MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
R M+ + W YV+ E ++ R +YER +
Sbjct: 167 FER---------------------WMEWQPEEQAWQTYVNFELRYKEIDRAREIYERFV- 204
Query: 544 LRIATPQI--IINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 601
P + I +A E H + + RV+ER V+ F ++++ ++F + G+
Sbjct: 205 --YVHPDVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEE--GQ 260
Query: 602 TKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLG 661
+ +RAR +++ A++ P D + L+ Y K E+ YG ++ G
Sbjct: 261 KEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYG-------------------DRAG 301
Query: 662 MYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYV 721
+ ++ ++ K + YEQ + + + D Y L ++ G+ D+ R Y
Sbjct: 302 IEDVIVS---------KRKYQYEQEVAANPTNYDA---WFDYLRLIEAEGDRDQIRETYE 349
Query: 722 FASQFADPRSDTEFWNRWHEFEVNHG 747
A P ++ FW R+ +N+
Sbjct: 350 RAISNVPPANEKNFWRRYIYLWINYA 375
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 144/367 (39%), Gaps = 51/367 (13%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W + YK+I AR I+++ V V+ + W ++A E H G+ +
Sbjct: 180 WQTYVNFELRYKEIDRAREIYERFVYVHPDVKN-----WIKFARFEESHGFIHGSRRVFE 234
Query: 486 RAT---AEPSVEVRRRVAADGNEPVQMKLHKSLR-----------------LWTFYVDLE 525
RA + +E R +A E Q K H R L+ Y E
Sbjct: 235 RAVEFFGDDYIEERLFIAFARFEEGQ-KEHDRARIIYKYALDHLPKDRTQELFKAYTKHE 293
Query: 526 ESLGNLESTRAV--------YERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
+ G+ V YE+ + +Y L+E + YER +
Sbjct: 294 KKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAIS 353
Query: 578 IFKYPHVKDIWVTYLSKFVKRYGKTKLE-----RARELFENAVETAPAD--AVKPLYLQY 630
+ K+ W Y+ ++ +LE R R++++ +E P L+L Y
Sbjct: 354 NVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLY 413
Query: 631 AKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESG 690
A+ E +RA K A P + ++ YI ++ + R +YE+ +E G
Sbjct: 414 AQFEIRCKELQRARKALGLAIGMCPRDK---LFRGYIDLEIQLREFERCRMLYEKFLEFG 470
Query: 691 LPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTE--FWNRWHEFEVNHGN 748
P+ V M K+AELE LG+ DRAR I+ A Q PR D W + +FEV G
Sbjct: 471 -PENCVTWM--KFAELENLLGDTDRARAIFELAVQ--QPRLDMPELLWKAYIDFEVALGE 525
Query: 749 EDTFREM 755
+ R++
Sbjct: 526 TELARQL 532
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 19/247 (7%)
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVK 577
W Y EE ++ R+++ER LD + + YA + ++K A +++R V
Sbjct: 79 WIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVT 138
Query: 578 IFKYPHVKDIWVTYLSKFVKRYGKTKLER---ARELFENAVETAPADAVKPLYLQYAKLE 634
I P V W Y Y + LE AR++FE +E P + + Y E
Sbjct: 139 IM--PRVNQFWYKYT------YMEEMLENVAGARQVFERWMEWQPEEQA---WQTYVNFE 187
Query: 635 EDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFG-VPKTREIYEQAIESGLPD 693
Y RA ++Y++ P+ + I AR E G + +R ++E+A+E D
Sbjct: 188 LRYKEIDRAREIYERFVYVHPDVKNW----IKFARFEESHGFIHGSRRVFERAVEFFGDD 243
Query: 694 KDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFR 753
+ + + +A E+ E DRAR IY +A E + + + E +G+
Sbjct: 244 YIEERLFIAFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRAGIE 303
Query: 754 EMLRIKR 760
+++ KR
Sbjct: 304 DVIVSKR 310
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 41/264 (15%)
Query: 381 NPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTVDPM--KAVGKPHT-LWVAFAKLYET 435
NP N + W +++ E + + TY A+ V P K + + LW+ +A LYE
Sbjct: 321 NPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYA-LYEE 379
Query: 436 YK--DIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSV 493
+ D R I+ +++ + +W +A+ E+R K + A R+A
Sbjct: 380 LEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRA----RKALG---- 431
Query: 494 EVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIII 553
A G P +L+ Y+DLE L E R +YE+ L+ P+ +
Sbjct: 432 ------LAIGMCPRD-------KLFRGYIDLEIQLREFERCRMLYEKFLEF---GPENCV 475
Query: 554 NYALLLEEHKYFEDAFR---VYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERAREL 610
+ E D R ++E V+ + + +W Y+ F G+T+L AR+L
Sbjct: 476 TWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELLWKAYID-FEVALGETEL--ARQL 532
Query: 611 FENAVETAPADAVKPLYLQYAKLE 634
+E +E V ++ +AK E
Sbjct: 533 YERLLERTQHVKV---WMSFAKFE 553
Score = 36.6 bits (83), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ +ERAL H+ +W+ Y E K + AR +DRA+ +P ++ W Y ++
Sbjct: 97 SIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRV--NQFWYKYT-YM 153
Query: 149 EQEGIPIETSLRVYRRYLKYDP 170
E+ + + +V+ R++++ P
Sbjct: 154 EEMLENVAGARQVFERWMEWQP 175
Score = 33.1 bits (74), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 16 YEEELLRNPFSLKLWWRYL-VAKREAPFKKRFVIYERALKALPGSYK--LWHAYLIERLS 72
YE+E+ NP + W+ YL + + E + YERA+ +P + + W Y+ ++
Sbjct: 314 YEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWIN 373
Query: 73 IVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDRA 128
+ + E ++ L + HK ++W++Y + K + +AR+ A
Sbjct: 374 YALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLA 433
Query: 129 LCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+ P D+++ Y+ +E + E +Y ++L++ P + +++F
Sbjct: 434 IGMCP---RDKLFRGYID-LEIQLREFERCRMLYEKFLEFGPENCVTWMKF 480
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 42/294 (14%)
Query: 480 ALELMRRAT--AEPSVEVRRRVAADGNEPVQMKLHK-------------SLRLWTFYVDL 524
A +L+R A EP+++ ++ D E + + K S+ WT Y
Sbjct: 25 AEQLLREAQERQEPTIQAPKQRVQDLEELSEFQARKRTEFESRIRYSRDSILAWTKYAQW 84
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHV 584
E S E +R+V+ER LD+ + + I Y + + + A +++R + + P V
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLL--PRV 142
Query: 585 KDIW--VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKR 642
+W YL + + + AR++FE ++ P D + Y KLEE Y R
Sbjct: 143 DALWYKYVYLEELL-----LNVSGARQIFERWMQWEPNDKA---WQSYIKLEERYNELDR 194
Query: 643 AMKVYDQ--ATKAVPNHEKLGMYEIYIARAAEIFGVP-KTREIYEQAIE-SGLPDKDV-- 696
A +Y++ A + +P + + A+ E G P K RE+++ A+E G ++ V
Sbjct: 195 ASAIYERWIACRPIPKN------WVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEK 248
Query: 697 -KAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDT-EFWNRWHEFEVNHGN 748
+++ +A +E L E +RAR IY FA PRS + + ++ +FE HG+
Sbjct: 249 AQSVFAAFARMETRLKEFERARVIYKFALARL-PRSKSASLYAQYTKFEKQHGD 301
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 161/371 (43%), Gaps = 45/371 (12%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W +A+ + + +R +F++A+ V+ ++VD +W ++ +MEL+ +N A L
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVD----LWIKYTDMELKARNINHARNLFD 133
Query: 486 RA-TAEPSVEV---------RRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLE 532
RA T P V+ + G + M+ + + W Y+ LEE L+
Sbjct: 134 RAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELD 193
Query: 533 STRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVK-DIWVTY 591
A+YER + R P+ + +A E+ + A V++ ++ F + + +
Sbjct: 194 RASAIYERWIACR-PIPKNWVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSV 252
Query: 592 LSKFVKRYGKTK-LERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LAK 641
+ F + + K ERAR +++ A+ P LY QY K E+ +G L K
Sbjct: 253 FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGK 312
Query: 642 RAMKVYDQATKAVPNHE---KLGMYEIYIARA----AEIFGVPKTREIYEQAIESGLPDK 694
R ++ ++ N++ L E RA E + RE+YE+A+ + P
Sbjct: 313 RRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPAL 372
Query: 695 DVK------AMCLKYAELEK-SLGEIDRARGIYVFASQFADPRSDT--EFWNRWHEFEVN 745
+ + + L+YA E+ + DRAR +Y A + ++ T + W + FE+
Sbjct: 373 EKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIR 432
Query: 746 HGNEDTFREML 756
+ R++L
Sbjct: 433 RLDVSAARKVL 443
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
+ EYE + FERAL + +WI Y + + I AR FDRA+ LP D
Sbjct: 87 SQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRV--DA 144
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
+W Y+ ++E+ + + + +++ R+++++P+
Sbjct: 145 LWYKYV-YLEELLLNVSGARQIFERWMQWEPN 175
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 29/171 (16%)
Query: 411 RTVDPMKAVGK--PHT------LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLAS 462
R D KA K PH LW+A+A D++ AR + + + K
Sbjct: 400 RARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKP-----K 454
Query: 463 IWCEWAEMELRHKNFKGALELMRR---------------ATAEPSVEVRRRVAADGNEPV 507
++ + E+E+R + F L + E +VE RV A V
Sbjct: 455 LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAV 514
Query: 508 QMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALL 558
Q L +W Y+D E G E R +YER+L+ R + ++ I+YAL+
Sbjct: 515 QQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE-RTSHVKVWISYALM 564
Score = 40.4 bits (93), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 48 IYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIW-- 105
++ERAL P S LW Y L K I H N F+RA+ + ++ +W
Sbjct: 97 VFERALDVDPRSVDLWIKYTDMEL---KARNINHA-----RNLFDRAITLLPRVDALWYK 148
Query: 106 IMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRY 165
+YLE L ++ AR+ F+R + P +D+ W+ Y++ +E+ ++ + +Y R+
Sbjct: 149 YVYLEELLLN--VSGARQIFERWMQWEP---NDKAWQSYIK-LEERYNELDRASAIYERW 202
Query: 166 LKYDP 170
+ P
Sbjct: 203 IACRP 207
Score = 37.0 bits (84), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 131/364 (35%), Gaps = 101/364 (27%)
Query: 399 PTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFAKLYET-YKDIANARVIFDKAVQV 452
P + Y AV V P A+ K + LW+ +A E KD AR ++ AV++
Sbjct: 354 PMRVREVYERAVANVPP--ALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKL 411
Query: 453 NYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLH 512
A +W +A E+R + A R+V G + +
Sbjct: 412 VPHKTFTFAKLWLAYAYFEIRRLDVSAA----------------RKVLGAG-----IGMC 450
Query: 513 KSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVY 572
+L+T Y++LE L + R +YE+ L Y
Sbjct: 451 PKPKLFTGYIELEMRLREFDRVRTLYEKFL----------------------------TY 482
Query: 573 ERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAK 632
+ P + W+ + ER R +FE AV+ + D + ++ Y
Sbjct: 483 D--------PSLSSAWIQWTQV---ESAVEDFERVRAIFELAVQQS-LDMPEIVWKAYID 530
Query: 633 LEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLP 692
E G +RA +Y++ E+ +++I+ A + E A G
Sbjct: 531 FEAGEGERERARNLYERLL------ERTSHVKVWISYA-----------LMEIATLGGGE 573
Query: 693 DKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNR------WHEFEVNH 746
D+D E+E G+ D AR VF + D R+ E +R W FE H
Sbjct: 574 DEDGN-------EIEGEAGDADLARK--VFERGYKDLRAKGEKEDRAVLLESWKSFEQEH 624
Query: 747 GNED 750
G+E+
Sbjct: 625 GDEE 628
Score = 36.6 bits (83), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 157/373 (42%), Gaps = 58/373 (15%)
Query: 376 VLLRQNPHNVEQWHRRVKIFE---GNPTKQILTYTEAVRTV-DPMKAVGKPHTLWVAFAK 431
+ R P N W + FE G P K + A+ D + V K +++ AFA+
Sbjct: 203 IACRPIPKNWVAWAK----FEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFAR 258
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP 491
+ K+ ARVI+ A+ ++ AS++ ++ + E +H + RA E
Sbjct: 259 METRLKEFERARVIYKFALARLPRS--KSASLYAQYTKFEKQHGD---------RAGVEL 307
Query: 492 SVEVRRRVAAD---GNEPVQMKLHKSL-RLW--TFYVDLEESLGNLESTRA--VYER-IL 542
+V +RR+ + +P SL RL + D E+ ++E R VYER +
Sbjct: 308 TVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDG-EDVEPMRVREVYERAVA 366
Query: 543 DLRIATPQ--------IIINYALLLE-EHKYFEDAFRVYERGVKIFKYPH----VKDIWV 589
++ A + + + YA E + K ++ A VY+ VK+ PH +W+
Sbjct: 367 NVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLV--PHKTFTFAKLWL 424
Query: 590 TYLSKFVKRYGKTKLERARELFENAVETAPADAVKP-LYLQYAKLEEDYGLAKRAMKVYD 648
Y ++R + AR++ + P KP L+ Y +LE R +Y+
Sbjct: 425 AYAYFEIRR---LDVSAARKVLGAGIGMCP----KPKLFTGYIELEMRLREFDRVRTLYE 477
Query: 649 QATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLK-YAELE 707
+ P+ + + A E F + R I+E A++ L D+ + K Y + E
Sbjct: 478 KFLTYDPSLSSAWIQWTQVESAVEDF--ERVRAIFELAVQQSL---DMPEIVWKAYIDFE 532
Query: 708 KSLGEIDRARGIY 720
GE +RAR +Y
Sbjct: 533 AGEGERERARNLY 545
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 42/294 (14%)
Query: 480 ALELMRRAT--AEPSVEVRRRVAADGNEPVQMKLHK-------------SLRLWTFYVDL 524
A +L+R A EP+++ ++ D E + + K S+ WT Y
Sbjct: 25 AEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARKRTEFESRIRYSRDSILAWTKYAQW 84
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHV 584
E S E +R+V+ER LD+ + + I Y + + + A +++R + + P V
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLL--PRV 142
Query: 585 KDIW--VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKR 642
+W YL + + + AR++FE ++ P D + Y KLEE Y R
Sbjct: 143 DALWYKYVYLEELL-----LNVSGARQIFERWMQWEPNDKA---WQSYIKLEERYNELDR 194
Query: 643 AMKVYDQ--ATKAVPNHEKLGMYEIYIARAAEIFGVP-KTREIYEQAIE-SGLPDKDV-- 696
A +Y++ A + +P + + A+ E G P K RE+++ A+E G ++ V
Sbjct: 195 ASAIYERWIACRPIPKN------WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEK 248
Query: 697 -KAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDT-EFWNRWHEFEVNHGN 748
+++ +A +E L E +RAR IY FA PRS + + ++ +FE HG+
Sbjct: 249 AQSVFAAFARMETRLKEFERARVIYKFALARL-PRSKSASLYAQYTKFEKQHGD 301
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 162/372 (43%), Gaps = 47/372 (12%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W +A+ + + +R +F++A+ V+ ++VD +W ++ +MEL+ +N A L
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVD----LWIKYTDMELKARNINHARNLFD 133
Query: 486 RA-TAEPSVEV---------RRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLE 532
RA T P V+ + G + M+ + + W Y+ LEE L+
Sbjct: 134 RAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELD 193
Query: 533 STRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIF--KYPHVKDIWVT 590
A+YER + R P+ + +A E+ + A V++ ++ F + V+ +
Sbjct: 194 RASAIYERWIACR-PIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKA-QS 251
Query: 591 YLSKFVKRYGKTK-LERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LA 640
+ F + + K ERAR +++ A+ P LY QY K E+ +G L
Sbjct: 252 VFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLG 311
Query: 641 KRAMKVYDQATKAVPNHE---KLGMYEIYIARA----AEIFGVPKTREIYEQAIESGLPD 693
KR ++ ++ N++ L E RA E + RE+YE+A+ + P
Sbjct: 312 KRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPA 371
Query: 694 KDVK------AMCLKYAELEK-SLGEIDRARGIYVFASQFADPRSDT--EFWNRWHEFEV 744
+ + + L+YA E+ + DRAR +Y A + ++ T + W + FE+
Sbjct: 372 LEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEI 431
Query: 745 NHGNEDTFREML 756
+ R++L
Sbjct: 432 RRLDVSAARKVL 443
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
+ EYE + FERAL + +WI Y + + I AR FDRA+ LP D
Sbjct: 87 SQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRV--DA 144
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
+W Y+ ++E+ + + + +++ R+++++P+
Sbjct: 145 LWYKYV-YLEELLLNVSGARQIFERWMQWEPN 175
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 29/171 (16%)
Query: 411 RTVDPMKAVGK--PHT------LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLAS 462
R D KA K PH LW+A+A D++ AR + + + K
Sbjct: 400 RARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKP-----K 454
Query: 463 IWCEWAEMELRHKNFKGALELMRR---------------ATAEPSVEVRRRVAADGNEPV 507
++ + E+E+R + F L + E +VE RV A V
Sbjct: 455 LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAV 514
Query: 508 QMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALL 558
Q L +W Y+D E G E R +YER+L+ R + ++ I+YAL+
Sbjct: 515 QQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE-RTSHVKVWISYALM 564
Score = 40.0 bits (92), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 48 IYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIW-- 105
++ERAL P S LW Y L K I H N F+RA+ + ++ +W
Sbjct: 97 VFERALDVDPRSVDLWIKYTDMEL---KARNINHA-----RNLFDRAITLLPRVDALWYK 148
Query: 106 IMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRY 165
+YLE L ++ AR+ F+R + P +D+ W+ Y++ +E+ ++ + +Y R+
Sbjct: 149 YVYLEELLLN--VSGARQIFERWMQWEP---NDKAWQSYIK-LEERYNELDRASAIYERW 202
Query: 166 LKYDP 170
+ P
Sbjct: 203 IACRP 207
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 132/366 (36%), Gaps = 101/366 (27%)
Query: 399 PTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFAKLYET-YKDIANARVIFDKAVQV 452
P + Y AV V P A+ K + LW+ +A E KD AR ++ AV++
Sbjct: 354 PMRVREVYERAVANVPP--ALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKL 411
Query: 453 NYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLH 512
A +W +A E+R + A R+V G + +
Sbjct: 412 VPHKTFTFAKLWLAYAYFEIRRLDVSAA----------------RKVLGAG-----IGMC 450
Query: 513 KSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVY 572
+L+T Y++LE L + R +YE+ L Y
Sbjct: 451 PKPKLFTGYIELEMRLREFDRVRTLYEKFL----------------------------TY 482
Query: 573 ERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAK 632
+ P + W+ + ER R +FE AV+ + D + ++ Y
Sbjct: 483 D--------PSLSSAWIQWTQV---ESAVEDFERVRAIFELAVQQS-LDMPEIVWKAYID 530
Query: 633 LEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLP 692
E G +RA +Y++ E+ +++I+ A + E A G
Sbjct: 531 FEAGEGERERARNLYERLL------ERTSHVKVWISYA-----------LMEIATLGGGE 573
Query: 693 DKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNR------WHEFEVNH 746
D+D E+E G+ D AR VF + D R+ E +R W FE H
Sbjct: 574 DEDGN-------EIEGEAGDADLARQ--VFERGYKDLRAKGEKEDRAVLLESWKSFEQEH 624
Query: 747 GNEDTF 752
G+E+T
Sbjct: 625 GDEETL 630
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 157/373 (42%), Gaps = 58/373 (15%)
Query: 376 VLLRQNPHNVEQWHRRVKIFE---GNPTKQILTYTEAVRTV-DPMKAVGKPHTLWVAFAK 431
+ R P N W + FE G P K + A+ D + V K +++ AFA+
Sbjct: 203 IACRPIPKNWVTWAK----FEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFAR 258
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP 491
+ K+ ARVI+ A+ ++ AS++ ++ + E +H + RA E
Sbjct: 259 METRLKEFERARVIYKFALARLPRS--KSASLYAQYTKFEKQHGD---------RAGVEL 307
Query: 492 SVEVRRRVAAD---GNEPVQMKLHKSL-RLW--TFYVDLEESLGNLESTRA--VYER-IL 542
+V +RR+ + +P SL RL + D E+ ++E R VYER +
Sbjct: 308 TVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDG-EDVEPMRVREVYERAVA 366
Query: 543 DLRIATPQ--------IIINYALLLE-EHKYFEDAFRVYERGVKIFKYPH----VKDIWV 589
++ A + + + YA E + K ++ A VY+ VK+ PH +W+
Sbjct: 367 NVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLV--PHKTFTFAKLWL 424
Query: 590 TYLSKFVKRYGKTKLERARELFENAVETAPADAVKP-LYLQYAKLEEDYGLAKRAMKVYD 648
Y ++R + AR++ + P KP L+ Y +LE R +Y+
Sbjct: 425 AYAYFEIRR---LDVSAARKVLGAGIGMCP----KPKLFTGYIELEMRLREFDRVRTLYE 477
Query: 649 QATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLK-YAELE 707
+ P+ + + A E F + R I+E A++ L D+ + K Y + E
Sbjct: 478 KFLTYDPSLSSAWIQWTQVESAVEDF--ERVRAIFELAVQQSL---DMPEIVWKAYIDFE 532
Query: 708 KSLGEIDRARGIY 720
GE +RAR +Y
Sbjct: 533 AGEGERERARNLY 545
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 42/294 (14%)
Query: 480 ALELMRRAT--AEPSVEVRRRVAADGNEPVQMKLHK-------------SLRLWTFYVDL 524
A +L+R A EP+++ ++ D E + + K S+ WT Y
Sbjct: 25 AEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARKRTEFESRIRYSRDSILAWTKYAQW 84
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHV 584
E S E +R+V+ER LD+ + + I Y + + + A +++R + + P V
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLL--PRV 142
Query: 585 KDIW--VTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKR 642
+W YL + + + AR++FE ++ P D + Y KLEE Y R
Sbjct: 143 DALWYKYVYLEELL-----LNVSGARQIFERWMQWEPNDKA---WQSYIKLEERYNELDR 194
Query: 643 AMKVYDQ--ATKAVPNHEKLGMYEIYIARAAEIFGVP-KTREIYEQAIE-SGLPDKDV-- 696
A +Y++ A + +P + + A+ E G P K RE+++ A+E G ++ V
Sbjct: 195 ASAIYERWIACRPIPKN------WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEK 248
Query: 697 -KAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDT-EFWNRWHEFEVNHGN 748
+++ +A +E L E +RAR IY FA PRS + + ++ +FE HG+
Sbjct: 249 AQSVFAAFARMETRLKEFERARVIYKFALARL-PRSKSASLYAQYTKFEKQHGD 301
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 162/372 (43%), Gaps = 47/372 (12%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W +A+ + + +R +F++A+ V+ ++VD +W ++ +MEL+ +N A L
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVD----LWIKYTDMELKARNINHARNLFD 133
Query: 486 RA-TAEPSVEV---------RRRVAADGNEPV---QMKLHKSLRLWTFYVDLEESLGNLE 532
RA T P V+ + G + M+ + + W Y+ LEE L+
Sbjct: 134 RAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELD 193
Query: 533 STRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIF--KYPHVKDIWVT 590
A+YER + R P+ + +A E+ + A V++ ++ F + V+ +
Sbjct: 194 RASAIYERWIACR-PIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKA-QS 251
Query: 591 YLSKFVKRYGKTK-LERARELFENAVETAPADAVKPLYLQYAKLEEDYG---------LA 640
+ F + + K ERAR +++ A+ P LY QY K E+ +G L
Sbjct: 252 VFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLG 311
Query: 641 KRAMKVYDQATKAVPNHE---KLGMYEIYIARA----AEIFGVPKTREIYEQAIESGLPD 693
KR ++ ++ N++ L E RA E + RE+YE+A+ + P
Sbjct: 312 KRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPA 371
Query: 694 KDVK------AMCLKYAELEK-SLGEIDRARGIYVFASQFADPRSDT--EFWNRWHEFEV 744
+ + + L+YA E+ + DRAR +Y A + ++ T + W + FE+
Sbjct: 372 LEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEI 431
Query: 745 NHGNEDTFREML 756
+ R++L
Sbjct: 432 RRLDVSAARKVL 443
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 80 THPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDR 139
+ EYE + FERAL + +WI Y + + I AR FDRA+ LP D
Sbjct: 87 SQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRV--DA 144
Query: 140 IWEIYLRFVEQEGIPIETSLRVYRRYLKYDPS 171
+W Y+ ++E+ + + + +++ R+++++P+
Sbjct: 145 LWYKYV-YLEELLLNVSGARQIFERWMQWEPN 175
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 29/171 (16%)
Query: 411 RTVDPMKAVGK--PHT------LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLAS 462
R D KA K PH LW+A+A D++ AR + + + K
Sbjct: 400 RARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKP-----K 454
Query: 463 IWCEWAEMELRHKNFKGALELMRR---------------ATAEPSVEVRRRVAADGNEPV 507
++ + E+E+R + F L + E +VE RV A V
Sbjct: 455 LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAV 514
Query: 508 QMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALL 558
Q L +W Y+D E G E R +YER+L+ R + ++ I+YAL+
Sbjct: 515 QQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLE-RTSHVKVWISYALM 564
Score = 40.0 bits (92), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 48 IYERALKALPGSYKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIW-- 105
++ERAL P S LW Y L K I H N F+RA+ + ++ +W
Sbjct: 97 VFERALDVDPRSVDLWIKYTDMEL---KARNINHA-----RNLFDRAITLLPRVDALWYK 148
Query: 106 IMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRY 165
+YLE L ++ AR+ F+R + P +D+ W+ Y++ +E+ ++ + +Y R+
Sbjct: 149 YVYLEELLLN--VSGARQIFERWMQWEP---NDKAWQSYIK-LEERYNELDRASAIYERW 202
Query: 166 LKYDP 170
+ P
Sbjct: 203 IACRP 207
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 132/366 (36%), Gaps = 101/366 (27%)
Query: 399 PTKQILTYTEAVRTVDPMKAVGKPH-----TLWVAFAKLYET-YKDIANARVIFDKAVQV 452
P + Y AV V P A+ K + LW+ +A E KD AR ++ AV++
Sbjct: 354 PMRVREVYERAVANVPP--ALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKL 411
Query: 453 NYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLH 512
A +W +A E+R + A R+V G + +
Sbjct: 412 VPHKTFTFAKLWLAYAYFEIRRLDVSAA----------------RKVLGAG-----IGMC 450
Query: 513 KSLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVY 572
+L+T Y++LE L + R +YE+ L Y
Sbjct: 451 PKPKLFTGYIELEMRLREFDRVRTLYEKFL----------------------------TY 482
Query: 573 ERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAK 632
+ P + W+ + ER R +FE AV+ + D + ++ Y
Sbjct: 483 D--------PSLSSAWIQWTQV---ESAVEDFERVRAIFELAVQQS-LDMPEIVWKAYID 530
Query: 633 LEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLP 692
E G +RA +Y++ E+ +++I+ A + E A G
Sbjct: 531 FEAGEGERERARNLYERLL------ERTSHVKVWISYA-----------LMEIATLGGGE 573
Query: 693 DKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNR------WHEFEVNH 746
D+D E+E G+ D AR VF + D R+ E +R W FE H
Sbjct: 574 DEDGN-------EIEGEAGDADLARQ--VFERGYKDLRAKGEKEDRAVLLESWKSFEQEH 624
Query: 747 GNEDTF 752
G+E+T
Sbjct: 625 GDEETL 630
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 157/373 (42%), Gaps = 58/373 (15%)
Query: 376 VLLRQNPHNVEQWHRRVKIFE---GNPTKQILTYTEAVRTV-DPMKAVGKPHTLWVAFAK 431
+ R P N W + FE G P K + A+ D + V K +++ AFA+
Sbjct: 203 IACRPIPKNWVTWAK----FEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFAR 258
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMRRATAEP 491
+ K+ ARVI+ A+ ++ AS++ ++ + E +H + RA E
Sbjct: 259 METRLKEFERARVIYKFALARLPRS--KSASLYAQYTKFEKQHGD---------RAGVEL 307
Query: 492 SVEVRRRVAAD---GNEPVQMKLHKSL-RLW--TFYVDLEESLGNLESTRA--VYER-IL 542
+V +RR+ + +P SL RL + D E+ ++E R VYER +
Sbjct: 308 TVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDG-EDVEPMRVREVYERAVA 366
Query: 543 DLRIATPQ--------IIINYALLLE-EHKYFEDAFRVYERGVKIFKYPH----VKDIWV 589
++ A + + + YA E + K ++ A VY+ VK+ PH +W+
Sbjct: 367 NVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLV--PHKTFTFAKLWL 424
Query: 590 TYLSKFVKRYGKTKLERARELFENAVETAPADAVKP-LYLQYAKLEEDYGLAKRAMKVYD 648
Y ++R + AR++ + P KP L+ Y +LE R +Y+
Sbjct: 425 AYAYFEIRR---LDVSAARKVLGAGIGMCP----KPKLFTGYIELEMRLREFDRVRTLYE 477
Query: 649 QATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLK-YAELE 707
+ P+ + + A E F + R I+E A++ L D+ + K Y + E
Sbjct: 478 KFLTYDPSLSSAWIQWTQVESAVEDF--ERVRAIFELAVQQSL---DMPEIVWKAYIDFE 532
Query: 708 KSLGEIDRARGIY 720
GE +RAR +Y
Sbjct: 533 AGEGERERARNLY 545
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 201/501 (40%), Gaps = 113/501 (22%)
Query: 426 WVAFAKLYETYK-DIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
W+ +AK + D AR IF++A++VN V H+ W + + EL HKN A L+
Sbjct: 71 WLRYAKWEVKHNHDFPRARSIFERALEVN---VQHIP-FWTHYIQFELSHKNITHARNLL 126
Query: 485 RRA-TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD 543
RA T P V+ +LW YV EE+L N + R ++ER L
Sbjct: 127 DRAVTTLPRVD---------------------KLWFLYVQTEETLKNYQMVRIIFERWLS 165
Query: 544 LRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTY------------ 591
P Y + + +++A +Y R V+I + W+ +
Sbjct: 166 WN-PNPSAWDAYINYEKRYDEYDNAREIYIRYVQIHSSGEIWLKWIDFEMNDVPIDPEQV 224
Query: 592 -------------------------LSKFVKRYGKTKL-----ERARELFENAVET-APA 620
L++ + ++ ++ ERAR +F+ +++
Sbjct: 225 KRIRNVFELSVDSMLASEALRGDISLAEIINKWSLWEISVKEYERARAIFQLMLKSDTIQ 284
Query: 621 DAVKP-----LYLQYAKLEEDYG---------LAKRAMKVYDQATKAVPNHEKLGMYEIY 666
+ + P +Y Y + E+ YG + KR +K ++ K+ +++ Y I
Sbjct: 285 EIITPEQRNQIYSSYTEFEKSYGDKDTIESSIMIKRKLKYEEEVNKSPSDYDSWWSY-IS 343
Query: 667 IARAAEIFGVPKTREIYEQAIESGLPDKDVKA--------MCLKYAELEK-SLGEIDRAR 717
I + + V TRE +E+AI+ +P K+ + +KYA E+ ++G I+ R
Sbjct: 344 ILQQEDNNEV--TRETFERAIKV-IPTDAFKSTVWRRYIYIWVKYAFWEEFTMGSIENGR 400
Query: 718 GIYVFASQFADPRSDT--EFWNRWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFILP- 774
I+ A + + T + W + +FE+ + E+ +I + S Q+ + P
Sbjct: 401 NIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENGLASARKI---LGRSIGQSSTVKPK 457
Query: 775 ----EYLMQKDQRLSIDDAKDKLKQ-----AGVHEDEMAALERQLAPAANNGNAKDSSRK 825
++ ++ +Q+L D KL + + V E+ ++ + L N ++ R
Sbjct: 458 RKLFKFYIELEQKLGEWDRVRKLYEKWLELSLVGENNLSTINSLLTYIDFEKNIQEHQRC 517
Query: 826 VGFVSAGVESQTDGGIKTTAN 846
+ GV D I T N
Sbjct: 518 ISLFELGVRLAEDDKIFTKVN 538
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 152/355 (42%), Gaps = 53/355 (14%)
Query: 400 TKQILTYTEAVRTVDPMKAVGKPH-TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVD 458
T++ L + VR + P+ + W A+ + Y + NAR I+ + VQ++
Sbjct: 146 TEETLKNYQMVRIIFERWLSWNPNPSAWDAYINYEKRYDEYDNAREIYIRYVQIHSS--- 202
Query: 459 HLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLW 518
IW +W + E+ + E ++R + V +A++ + L + + W
Sbjct: 203 --GEIWLKWIDFEM--NDVPIDPEQVKRIRNVFELSVDSMLASEALRG-DISLAEIINKW 257
Query: 519 TFYVDLEESLGNLESTRAVYERILDLRIATPQIIIN-------YALLLEEHKYFEDAFRV 571
+ + E S+ E RA+++ L L+ T Q II Y+ E K + D +
Sbjct: 258 SLW---EISVKEYERARAIFQ--LMLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDKDTI 312
Query: 572 -----------YERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPA 620
YE V K P D W +Y+S + E RE FE A++ P
Sbjct: 313 ESSIMIKRKLKYEEEVN--KSPSDYDSWWSYISILQQEDNN---EVTRETFERAIKVIPT 367
Query: 621 DAVKP--------LYLQYAKLEE-DYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAA 671
DA K ++++YA EE G + ++++A K +P H++ +I+I+ A
Sbjct: 368 DAFKSTVWRRYIYIWVKYAFWEEFTMGSIENGRNIWNKALKVIP-HKRFTFAKIWISFAQ 426
Query: 672 -EI-----FGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIY 720
EI G+ R+I ++I K + + Y ELE+ LGE DR R +Y
Sbjct: 427 FEIRNDPENGLASARKILGRSIGQSSTVKPKRKLFKFYIELEQKLGEWDRVRKLY 481
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 378 LRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTV--DPMKA-VGKPHT-LWVAFAK 431
+ ++P + + W + I + ++ T+ A++ + D K+ V + + +WV +A
Sbjct: 328 VNKSPSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYIYIWVKYAF 387
Query: 432 LYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKG---ALELMRRA 487
E T I N R I++KA++V A IW +A+ E+R+ G A +++ R+
Sbjct: 388 WEEFTMGSIENGRNIWNKALKVIPHKRFTFAKIWISFAQFEIRNDPENGLASARKILGRS 447
Query: 488 TAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIA 547
+ S +R +L+ FY++LE+ LG + R +YE+ L+L +
Sbjct: 448 IGQSSTVKPKR-----------------KLFKFYIELEQKLGEWDRVRKLYEKWLELSLV 490
Query: 548 TPQIIINYALLLEEHKYFEDAFRVYERGVKIFK 580
+ LL + FE + ++R + +F+
Sbjct: 491 GENNLSTINSLL-TYIDFEKNIQEHQRCISLFE 522
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 42/226 (18%)
Query: 16 YEEELLRNPFSLKLWWRYLV--AKREAPFKKRFVIYERALKALPGSYKLWHAYLIERLSI 73
YE++L +N + W RY K F + I+ERAL+ W Y+ LS
Sbjct: 57 YEQQLNKNRLNFGQWLRYAKWEVKHNHDFPRARSIFERALEVNVQHIPFWTHYIQFELS- 115
Query: 74 VKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALP 133
KN ITH N +RA+ T+ ++ ++W +Y++T + K R F+R L P
Sbjct: 116 HKN--ITHAR-----NLLDRAVTTLPRVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNP 168
Query: 134 --------------VTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKY-------DPSH 172
++D EIY+R+V+ I +S ++ +++ + DP
Sbjct: 169 NPSAWDAYINYEKRYDEYDNAREIYIRYVQ-----IHSSGEIWLKWIDFEMNDVPIDPEQ 223
Query: 173 ---IEDFIEFLVKSKLWQEAAE---RLASVLNDDQFYSIKGKTKHR 212
I + E V S L EA LA ++N + I K R
Sbjct: 224 VKRIRNVFELSVDSMLASEALRGDISLAEIINKWSLWEISVKEYER 269
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 42/251 (16%)
Query: 91 FERAL-VTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFVE 149
FERAL V + +P W Y++ S K IT AR DRA+ LP D++W +Y++
Sbjct: 92 FERALEVNVQHIP-FWTHYIQFELSHKNITHARNLLDRAVTTLPRV--DKLWFLYVQ--T 146
Query: 150 QEGIPIETSLR-VYRRYLKY--DPSHIEDFIEFLVKSKLWQEAAERLASVLNDDQFY--S 204
+E + +R ++ R+L + +PS + +I + +R N + Y
Sbjct: 147 EETLKNYQMVRIIFERWLSWNPNPSAWDAYINY----------EKRYDEYDNAREIYIRY 196
Query: 205 IKGKTKHRLWLELCDL----------LTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTS 254
++ + +WL+ D + L+VD+++ + + +
Sbjct: 197 VQIHSSGEIWLKWIDFEMNDVPIDPEQVKRIRNVFELSVDSMLASEALRGDISLAEIINK 256
Query: 255 LADYYIRRELFEKARDIFE-----EGMMTVVTVRDFSVIFDSYSQFE------EIMVSAK 303
+ + I + +E+AR IF+ + + ++T + I+ SY++FE + + S+
Sbjct: 257 WSLWEISVKEYERARAIFQLMLKSDTIQEIITPEQRNQIYSSYTEFEKSYGDKDTIESSI 316
Query: 304 MAKPDLSVEEE 314
M K L EEE
Sbjct: 317 MIKRKLKYEEE 327
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 41/270 (15%)
Query: 414 DPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELR 473
D ++ G + W+ +A + ++ R I+++A+ V H +W + E EL+
Sbjct: 61 DRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVE----PHHLPLWLRYTEQELK 116
Query: 474 HKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLES 533
+N + A L RA + L + +LW YV LEE LGN+
Sbjct: 117 MRNVQHARNLYDRAVS--------------------ILPRIDQLWYKYVHLEELLGNIPG 156
Query: 534 TRAVYERILDLRIATPQIIINYALLLEEHKY--FEDAFRVYERGVKIFKYPHVKDIWVTY 591
TR V+ER + P+ +A + E +Y + A ++ER V P W+ +
Sbjct: 157 TRQVFERWMKW---EPEEKAWHAYINLEVRYDELDRASAIWERCVTCHPVPKQ---WIRW 210
Query: 592 LSKFVKRYGKTKLERARELFENAVETAPAD-----AVKPLYLQYAKLEEDYGLAKRAMKV 646
+KF + G LE+AR +F+ A++ D + ++ +AK+E +RA +
Sbjct: 211 -AKFEEDRG--NLEKARIVFQMALDYIGEDEDAMEKAQSVFTAFAKMETRLKEYERARVI 267
Query: 647 YDQATKAVPNHEKLGMYEIYIARAAEIFGV 676
Y A + +P + G+Y Y R + FG
Sbjct: 268 YKYALERLPRSKSEGIYSSY-TRFEKQFGT 296
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 197/490 (40%), Gaps = 116/490 (23%)
Query: 363 EHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAV--RTVDPMKAVG 420
E+ RR E + LR+N N+ W +K ++ + ++ R +D
Sbjct: 50 EYRGRRRSEFEDR--LRRNGLNMSTW---IKYASWEASQGEMDRCRSIYERALDV----- 99
Query: 421 KPH--TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFK 478
+PH LW+ + + +++ +AR ++D+AV + + + +W ++ +E N
Sbjct: 100 EPHHLPLWLRYTEQELKMRNVQHARNLYDRAVSI----LPRIDQLWYKYVHLEELLGNIP 155
Query: 479 GALELMRRATA-EP---------SVEVR----RRVAADGNEPVQMKLHKSLRLWTFYVDL 524
G ++ R EP ++EVR R +A V H + W +
Sbjct: 156 GTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRASAIWERCV--TCHPVPKQWIRWAKF 213
Query: 525 EESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKY--- 581
EE GNLE R V++ LD + + E + YER I+KY
Sbjct: 214 EEDRGNLEKARIVFQMALDYIGEDEDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALE 273
Query: 582 --PHVKD--IWVTYLSKFVKRYG-----------KTKLERARELFENAVETAPADAVKPL 626
P K I+ +Y ++F K++G K +++ EL APAD
Sbjct: 274 RLPRSKSEGIYSSY-TRFEKQFGTMNSVEDTVIGKRRIQYEEELAAQEAGGAPADY--DT 330
Query: 627 YLQYAKLEEDYGLA---------------KRAMKVYDQATKAVPNHEKLGMYEIYI---- 667
+ Y++LEED A KR +VY++A VP+ ++ + YI
Sbjct: 331 WFDYSRLEEDAYRALLATGGSQDQLQQAVKRVREVYERAIAQVPSSQEKRDWRRYIFLWL 390
Query: 668 --ARAAEI--FGVPKTREIYEQAIESGLPDK--------------DVKAMCL-------- 701
A EI +TREIY+ AI + +P + +V+ + L
Sbjct: 391 RYALFEEIDTRDYDRTREIYKAAI-ALVPHRRFTFAKLWVQYARFEVRRLELTAARKILG 449
Query: 702 -------------KYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGN 748
Y ELE SL E DRAR IY A ++ DP ++++ W R+ E E N +
Sbjct: 450 AAIGMAPKLKLFSSYIELEVSLKEFDRARKIYEKALEW-DP-TNSQTWVRFAELEKNLFD 507
Query: 749 EDTFREMLRI 758
D R + +
Sbjct: 508 TDRARALFEL 517
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 23/257 (8%)
Query: 514 SLRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYE 573
++ W Y E S G ++ R++YER LD+ + + Y + + + A +Y+
Sbjct: 69 NMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYD 128
Query: 574 RGVKIFKYPHVKDIWVTY--LSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYA 631
R V I P + +W Y L + + T R++FE ++ P + + Y
Sbjct: 129 RAVSIL--PRIDQLWYKYVHLEELLGNIPGT-----RQVFERWMKWEPEEKA---WHAYI 178
Query: 632 KLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFG-VPKTREIYEQAIESG 690
LE Y RA ++++ P ++ I A+ E G + K R +++ A++
Sbjct: 179 NLEVRYDELDRASAIWERCVTCHPVPKQW----IRWAKFEEDRGNLEKARIVFQMALDYI 234
Query: 691 LPDKDV----KAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTE-FWNRWHEFEVN 745
D+D +++ +A++E L E +RAR IY +A + PRS +E ++ + FE
Sbjct: 235 GEDEDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALERL-PRSKSEGIYSSYTRFEKQ 293
Query: 746 HGNEDTFREMLRIKRSV 762
G ++ + + KR +
Sbjct: 294 FGTMNSVEDTVIGKRRI 310
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 198/498 (39%), Gaps = 97/498 (19%)
Query: 80 THPEYETLNNTFERAL-VTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E + + +ERAL V H +P +W+ Y E + + AR +DRA+ LP + D
Sbjct: 82 SQGEMDRCRSIYERALDVEPHHLP-LWLRYTEQELKMRNVQHARNLYDRAVSILP--RID 138
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSH--IEDFIEFLVK-------SKLWQEA 189
++W Y+ E G I + +V+ R++K++P +I V+ S +W
Sbjct: 139 QLWYKYVHLEELLG-NIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRASAIW--- 194
Query: 190 AERLASVLN-DDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEV 248
ER + Q+ + R LE ++ A + G + DA+ ++
Sbjct: 195 -ERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAM---------EKA 244
Query: 249 GRLWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEE---IMVSAK-- 303
++T+ A R + +E+AR I++ + + + I+ SY++FE+ M S +
Sbjct: 245 QSVFTAFAKMETRLKEYERARVIYKYALERLPRSKS-EGIYSSYTRFEKQFGTMNSVEDT 303
Query: 304 -MAKPDLSVEEEEDDEEHGSA-EDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLAR 361
+ K + EEE +E G A D D D + + + +L D +
Sbjct: 304 VIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQD---------Q 354
Query: 362 LEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGK 421
L+ + R E+ + Q P + E+ R IF
Sbjct: 355 LQQAVKRVREVYERAIA-QVPSSQEKRDWRRYIF-------------------------- 387
Query: 422 PHTLWVAFAKLYET-YKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGA 480
LW+ +A E +D R I+ A+ + A +W ++A E+R A
Sbjct: 388 ---LWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAA 444
Query: 481 LELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYER 540
+++ AA G P L+L++ Y++LE SL + R +YE+
Sbjct: 445 RKIL--------------GAAIGMAP-------KLKLFSSYIELEVSLKEFDRARKIYEK 483
Query: 541 ILDLRIATPQIIINYALL 558
L+ Q + +A L
Sbjct: 484 ALEWDPTNSQTWVRFAEL 501
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 35/145 (24%)
Query: 15 LYEEELLRNPFSLKLWWRYLVAKREAPFKKRFV-----IYERALKALPGSYKLWHAY--L 67
+YE L P L LW RY E K R V +Y+RA+ LP +LW+ Y L
Sbjct: 92 IYERALDVEPHHLPLWLRYT----EQELKMRNVQHARNLYDRAVSILPRIDQLWYKYVHL 147
Query: 68 IERLSIVK-----------------------NLPITHPEYETLNNTFERALVTMHKMPRI 104
E L + NL + + E + + +ER VT H +P+
Sbjct: 148 EELLGNIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRASAIWERC-VTCHPVPKQ 206
Query: 105 WIMYLETLTSQKFITKARRTFDRAL 129
WI + + + + KAR F AL
Sbjct: 207 WIRWAKFEEDRGNLEKARIVFQMAL 231
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 210/523 (40%), Gaps = 95/523 (18%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ FERAL+ +WI Y++ K I AR +RA+ LP + D++W YL V
Sbjct: 86 SIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLP--RVDKLWYKYL-IV 142
Query: 149 EQEGIPIETSLRVYRRYLKYDP--SHIEDFIEFLVKSKLWQEAAERLASVLNDDQFYSIK 206
E+ +E +Y ++ +P + F++F ++ K W E + +
Sbjct: 143 EESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKY--------VM 194
Query: 207 GKTKHRLWLELCDLLTTHAT-----EISGLNVDAIIR-GGIRKFTD-EVGRLWTSLADYY 259
+ + WL+ H + L +D + ++ ++D EV +L S A +
Sbjct: 195 AHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAHWE 254
Query: 260 IRRELFEKARDIFE-------EGMMTVVTVRDFSVIFDSYSQFEE-IMVSAKMAKPDLSV 311
++ +E++ +++ + + DF F + EE I KM
Sbjct: 255 AAQQEYERSSALYQIAIEKWPSNQLLKAGLLDFEKQFGDINSIEETISYKRKM------- 307
Query: 312 EEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDVDLRLARLEHLMNRRP- 370
E E + + + + L ++L F K+++ F + +++ RP
Sbjct: 308 -EYETILSNNAYDYDTWWLYLDLISESFPKQIMQTF--------------EKAIVDSRPK 352
Query: 371 ELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTVDPMKAVGKPH------T 424
EL+ +V Q + W R + E +L R +D + PH
Sbjct: 353 ELSKNV---QWKRYIYLWMRYICYVELELENSLLEEELFQRLIDDI----IPHKHFTFSK 405
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
+W+ +AK + D+ AR I KA+ + C + K FKG +EL
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIGL------------CP------KAKTFKGYIEL- 446
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILD- 543
E ++ RV + ++ + L++W+ Y +LEE+LG+ + R +Y LD
Sbjct: 447 -----EVKLKEFDRVRKIYEKFIEFQ-PSDLQIWSQYGELEENLGDWDRVRGIYTIALDE 500
Query: 544 -----LRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKY 581
+ A ++ Y E + FE A ++Y R +++ +Y
Sbjct: 501 NSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQY 543
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 626 LYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQ 685
++L YAK + +A K+ +A P K ++ YI ++ + R+IYE+
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIGLCP---KAKTFKGYIELEVKLKEFDRVRKIYEK 462
Query: 686 AIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFA 723
IE D + + +Y ELE++LG+ DR RGIY A
Sbjct: 463 FIEFQPSDLQIWS---QYGELEENLGDWDRVRGIYTIA 497
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 115/299 (38%), Gaps = 81/299 (27%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A+ D+ AR IF++A+ V+ +W + + EL+ K A LM
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERALLVD----SSFIPLWIRYIDAELKVKCINHARNLMN 123
Query: 486 RATAE-PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA + P V+ +LW Y+ +EESL N+E R++Y + L
Sbjct: 124 RAISTLPRVD---------------------KLWYKYLIVEESLNNVEIVRSLYTKWCSL 162
Query: 545 RIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKL 604
E GV + W +++ ++ +
Sbjct: 163 ----------------------------EPGV---------NAWNSFVDFEIR---QKNW 182
Query: 605 ERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMY- 663
RE++ V P +L++ + E +G + VY A V N + L ++
Sbjct: 183 NGVREIYSKYVMAHPQ---MQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWS 239
Query: 664 EIYIARAAEIFG--------VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEID 714
++ +A+ F ++ +Y+ AIE ++ +KA L + EK G+I+
Sbjct: 240 DMEVAKLVNSFAHWEAAQQEYERSSALYQIAIEKWPSNQLLKAGLL---DFEKQFGDIN 295
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERAL-----KALPGSYKLWHAYLIER 70
YE L N + WW YL E+ K+ +E+A+ K L + + W Y+
Sbjct: 309 YETILSNNAYDYDTWWLYLDLISESFPKQIMQTFEKAIVDSRPKELSKNVQ-WKRYIYLW 367
Query: 71 LSIVKNLPITHPEYETLNNTFERAL--VTMHK---MPRIWIMYLETLTSQKFITKARRTF 125
+ + + + F+R + + HK +IW+MY + L + KAR+
Sbjct: 368 MRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKIL 427
Query: 126 DRALCALP--------------VTQHDRIWEIYLRFVE 149
+A+ P + + DR+ +IY +F+E
Sbjct: 428 GKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIE 465
Score = 33.1 bits (74), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 598 RYGKTKLE-----RARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATK 652
RY + ++E RAR +FE A+ + PL+++Y E A + ++A
Sbjct: 70 RYAQFEIEQHDMRRARSIFERAL--LVDSSFIPLWIRYIDAELKVKCINHARNLMNRAIS 127
Query: 653 AVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQ--AIESGLPDKDVKAMCLKYAELEKSL 710
+P +KL + Y+ + V R +Y + ++E G+ + + + E
Sbjct: 128 TLPRVDKL--WYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWN------SFVDFEIRQ 179
Query: 711 GEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREM 755
+ R IY S++ + W +W FE HGN + R +
Sbjct: 180 KNWNGVREIY---SKYVMAHPQMQTWLKWVRFENRHGNTEFTRSV 221
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 49/307 (15%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ + + K+ A AR +F++A+ V+ + +W ++ E E++++N A L
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYI----PLWLKYIECEMKNRNINHARNLFD 128
Query: 486 RATAE-PSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA + P V+ +LW YV +EE LGN+ R V+ER L
Sbjct: 129 RAVTQLPRVD---------------------KLWYKYVYMEEMLGNITGCRQVFERWLKW 167
Query: 545 RIATPQIIINYALLLEEHKYFED--AFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
P + + E +Y E+ A +YER V + +P V + W+ + ++F + G
Sbjct: 168 ---EPDENCWMSYIRMERRYHENERARGIYERFVVV--HPEVTN-WLRW-ARFEEECGNA 220
Query: 603 KLERARELFENAVETAPADAVKP-LYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLG 661
R+++ A++ + + ++ +AK E +RA ++ A +P + +
Sbjct: 221 A--NVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSME 278
Query: 662 MYEIYI---ARAAEIFGVPKT-----REIYEQAIESGLPDKDVKAMCLKYAELEKSLGEI 713
+Y+ Y + + GV T R YE+ ++ D D LK LE+S G+I
Sbjct: 279 LYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLK---LEESAGDI 335
Query: 714 DRARGIY 720
+ R Y
Sbjct: 336 NTIRETY 342
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 168/454 (37%), Gaps = 120/454 (26%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
LW+ + + ++I +AR +FD+AV VD L W ++ ME N G ++
Sbjct: 106 LWLKYIECEMKNRNINHARNLFDRAV-TQLPRVDKL---WYKYVYMEEMLGNITGCRQVF 161
Query: 485 RRATA-EPS-------VEVRRRV----AADGNEPVQMKLHKSLRLWTFYVDLEESLGNLE 532
R EP + + RR A G + +H + W + EE GN
Sbjct: 162 ERWLKWEPDENCWMSYIRMERRYHENERARGIYERFVVVHPEVTNWLRWARFEEECGNAA 221
Query: 533 STRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKY-----PHVK-- 585
+ R VY +D A Q +N + K FE + YER IFKY P K
Sbjct: 222 NVRQVYLAAID---ALGQEFLNERFFIAFAK-FEIRQKEYERARTIFKYAIDFMPRSKSM 277
Query: 586 DIWVTYLSKFVKRYGK---------------------------------TKLERA----- 607
+++ Y + F K++G KLE +
Sbjct: 278 ELYKEY-THFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDIN 336
Query: 608 --RELFENAVETAPADAVKP-------LYLQYAKLEE-DYGLAKRAMKVYDQATKAVPNH 657
RE +E A+ P K ++L Y EE D RA KVY +A K +P H
Sbjct: 337 TIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIP-H 395
Query: 658 EKLG------MYEIY-------------IARAAEIFGVPK-----------------TRE 681
+K MY ++ + RA + PK R
Sbjct: 396 KKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKLFRGYIEFEDAIKQFDRCRI 455
Query: 682 IYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHE 741
+YE+ I L D + A L YA LE LG+ DRAR +Y A + W + +
Sbjct: 456 LYEKWI---LYDPEACAPWLGYAALETKLGDSDRARALYNLAVNQPILETPELVWKAYID 512
Query: 742 F---EVNHGN-EDTFREMLRIKRSVSASYSQTHF 771
F E+ +G ++++LR V S +F
Sbjct: 513 FEFEEMEYGKARSIYQQLLRTAPHVKVWISFANF 546
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 79 ITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHD 138
+ E+ + FERAL +W+ Y+E + I AR FDRA+ LP D
Sbjct: 81 LDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRV--D 138
Query: 139 RIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEFLVKSKLWQEAAERLASVLN 198
++W Y+ E G I +V+ R+LK++P ++ ++ + + E ER +
Sbjct: 139 KLWYKYVYMEEMLG-NITGCRQVFERWLKWEPDE-NCWMSYIRMERRYHE-NERARGIY- 194
Query: 199 DDQFYSIKGKTKHRLWLELCDLLTTHATEISGLNVDAIIRGGIRKFTDEVGRLWTSLADY 258
++F + + + L + +A + + + AI G ++F +E R + + A +
Sbjct: 195 -ERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDALG-QEFLNE--RFFIAFAKF 250
Query: 259 YIRRELFEKARDIFEEGMMTVVTVRDFSVIFDSYSQFEE 297
IR++ +E+AR IF+ + + + ++ Y+ FE+
Sbjct: 251 EIRQKEYERARTIFKYAIDFMPRSKSME-LYKEYTHFEK 288
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 113/303 (37%), Gaps = 82/303 (27%)
Query: 518 WTFYVDLEESLGNLESTRAVYERILDLRIATPQII------------INYALLLE-EHKY 564
W + LEES G++ + R YE+ + P+++ +NY L E + K
Sbjct: 322 WLDLLKLEESAGDINTIRETYEKAI---AKVPEVVEKNAWRRYVYIWLNYCLFEEIDVKD 378
Query: 565 FEDAFRVYERGVKIFKYPHVK----DIWVTY----------------LSKFVKRYGKTKL 604
+ A +VY+ +K+ PH K +W+ Y L + + K KL
Sbjct: 379 VDRARKVYQEALKLI--PHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKL 436
Query: 605 --------------ERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQA 650
+R R L+E + P +A P +L YA LE G + RA +Y+ A
Sbjct: 437 FRGYIEFEDAIKQFDRCRILYEKWILYDP-EACAP-WLGYAALETKLGDSDRARALYNLA 494
Query: 651 TKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSL 710
+++ YI E K R IY+Q + + K + + +A E +
Sbjct: 495 VNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVK----VWISFANFEIAH 550
Query: 711 GEID----------------RARGIYVFASQFADPRSD------TEFWNRWHEFEVNHGN 748
E D RAR VF + A R W +FE HG
Sbjct: 551 LEDDDEEPPNEEVASPTAVVRARN--VFENALAHLRQQGLKEERVVLLEAWKQFEAMHGT 608
Query: 749 EDT 751
EDT
Sbjct: 609 EDT 611
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 141/367 (38%), Gaps = 73/367 (19%)
Query: 426 WVAFAKL-YETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM 484
W +AK E D AR I ++A+ VN + V W ++ ++EL HKN A LM
Sbjct: 123 WTRYAKWEIENNHDFPRARSILERALDVNIQHV----PFWIQYIQLELSHKNINHARNLM 178
Query: 485 RRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDL 544
RA L + +LW YV EE L N RAV+ER LD
Sbjct: 179 ERAIN--------------------TLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDW 218
Query: 545 RIATP--QIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKT 602
T IN+ EE + F+ Y + ++P+ W ++ K+ +
Sbjct: 219 HPDTSVWDAYINFEARYEEKENVRTIFKKY-----VHEFPNA-GTWYKWI-KYEMENNRD 271
Query: 603 KLERARELFENAVETAPADAVK---------PLYLQYAKLEEDYGLAKRAMKVY----DQ 649
+ R +FE+AV+T ++ + + + E G A RA +++ D
Sbjct: 272 DVNTVRAVFESAVDTLLSNKSEENDDDEEFATIISSWTSWEVSCGEASRANEIFKLLLDN 331
Query: 650 ATKA--VPNHEKLGMYEIYIARAAEIFG---------VPKTREIYEQAIESGLPDKDV-- 696
T + + K +Y ++ FG + K R YEQ I++ D D
Sbjct: 332 KTNKLEISDKTKSSIYTAFVEFEKN-FGNKDSIEQSVLIKRRIKYEQEIQNDPYDYDSWW 390
Query: 697 KAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNR------WHEF--EVNHGN 748
K M L L+ S + D + + W R W+ F E+ + N
Sbjct: 391 KYMTL----LQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAFWEEMTNNN 446
Query: 749 EDTFREM 755
D+ RE+
Sbjct: 447 PDSAREI 453
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%)
Query: 514 SLRLWTFYVDLE-ESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVY 572
+L WT Y E E+ + R++ ER LD+ I I Y L HK A +
Sbjct: 119 NLGQWTRYAKWEIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLM 178
Query: 573 ERGVKIFKYPHVKDIWVTYLS--KFVKRYGKTKLERARELFENAVETAPADAVKPLYLQY 630
ER + P V +W Y+ + +K Y R +FE ++ P +V Y+ +
Sbjct: 179 ERAINTL--PRVNKLWFLYVQTEEMLKNYP-----MVRAVFERWLDWHPDTSVWDAYINF 231
Query: 631 AKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIF--GVPKTREIYEQAIE 688
E Y + ++ + PN G + +I E V R ++E A++
Sbjct: 232 ---EARYEEKENVRTIFKKYVHEFPN---AGTWYKWIKYEMENNRDDVNTVRAVFESAVD 285
Query: 689 SGLP--------DKDVKAMCLKYAELEKSLGEIDRARGIYVF-------ASQFADPRSDT 733
+ L D++ + + E S GE RA I+ + +D ++ +
Sbjct: 286 TLLSNKSEENDDDEEFATIISSWTSWEVSCGEASRANEIFKLLLDNKTNKLEISD-KTKS 344
Query: 734 EFWNRWHEFEVNHGNEDTFREMLRIKRSV 762
+ + EFE N GN+D+ + + IKR +
Sbjct: 345 SIYTAFVEFEKNFGNKDSIEQSVLIKRRI 373
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 99/211 (46%), Gaps = 29/211 (13%)
Query: 378 LRQNPHNVEQWHRRVKIFEGNPTKQIL--TYTEAVRTV--DPMKAVG--KPHTLWVAFAK 431
++ +P++ + W + + + + + K L + + V D K++ + W+ +A
Sbjct: 379 IQNDPYDYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSIKWRRYIMFWIWYAF 438
Query: 432 LYE-TYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHK--NFKGALELMRRAT 488
E T + +AR I++ ++V A +W ++E ELR+ A +++ RA
Sbjct: 439 WEEMTNNNPDSAREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAI 498
Query: 489 AEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLRIAT 548
+ S+ N+P ++++ +Y+DLE+ LG+ R ++++ L++ + T
Sbjct: 499 GQTSI----------NKP-------KIKIFKYYIDLEKKLGDWNRVRLLFQKWLEVSLLT 541
Query: 549 PQIIINYALLLEEHKYFEDAFRVYERGVKIF 579
+ L++E++ FE + Y+R I
Sbjct: 542 TS---SSELVIEKYVEFESSIEEYDRCDSIL 569
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAP----FKKRFVIYERALKALPGSYKLWHAYLIERL 71
+E+ + +N +L W RY AK E F + I ERAL W Y+
Sbjct: 109 FEQHINKNRLNLGQWTRY--AKWEIENNHDFPRARSILERALDVNIQHVPFWIQYI---- 162
Query: 72 SIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCA 131
L ++H N ERA+ T+ ++ ++W +Y++T K R F+R L
Sbjct: 163 ----QLELSHKNINHARNLMERAINTLPRVNKLWFLYVQTEEMLKNYPMVRAVFERWLDW 218
Query: 132 LPVTQHDRIWEIYLRF 147
P T +W+ Y+ F
Sbjct: 219 HPDTS---VWDAYINF 231
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 43/349 (12%)
Query: 400 TKQILTYTEAVRTVDPMKAVGKPHT-LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVD 458
T+++L VR V P T +W A+ Y++ N R IF K V
Sbjct: 198 TEEMLKNYPMVRAVFERWLDWHPDTSVWDAYINFEARYEEKENVRTIFKKYVHEFPN--- 254
Query: 459 HLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLW 518
A W +W + E+ +N + + +R A E +V+ ++ N+ + + + W
Sbjct: 255 --AGTWYKWIKYEM--ENNRDDVNTVR-AVFESAVDTLLSNKSEENDDDE-EFATIISSW 308
Query: 519 TFYVDLEESLGNLESTRAVYERILD-----LRIATPQIIINYALLLEEHKYFEDAFRVYE 573
T + E S G +++ +LD L I+ Y +E K F + + E
Sbjct: 309 TSW---EVSCGEASRANEIFKLLLDNKTNKLEISDKTKSSIYTAFVEFEKNFGNKDSI-E 364
Query: 574 RGVKI---FKY-------PHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAV 623
+ V I KY P+ D W Y++ K+ LE A + V ++
Sbjct: 365 QSVLIKRRIKYEQEIQNDPYDYDSWWKYMTLLQNSSNKSDLENAFKKVTGNVVHDKHKSI 424
Query: 624 K-----PLYLQYAKLEE-DYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIA------RAA 671
K ++ YA EE A ++++ K +P H+ +++I R +
Sbjct: 425 KWRRYIMFWIWYAFWEEMTNNNPDSAREIWNNCLKVIP-HKSFTFAKVWIGYSEFELRNS 483
Query: 672 EIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIY 720
E G+ K R+I +AI +K + Y +LEK LG+ +R R ++
Sbjct: 484 ED-GLAKARKILGRAIGQTSINKPKIKIFKYYIDLEKKLGDWNRVRLLF 531
Score = 34.3 bits (77), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 26/139 (18%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGS---------------- 59
YE+E+ +P+ WW+Y+ + + K E A K + G+
Sbjct: 375 YEQEIQNDPYDYDSWWKYMTLLQNSSNKSDL---ENAFKKVTGNVVHDKHKSIKWRRYIM 431
Query: 60 YKLWHAYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMY--LETLTSQKF 117
+ +W+A+ E + N P + E NN + ++WI Y E S+
Sbjct: 432 FWIWYAFWEE---MTNNNPDSAR--EIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDG 486
Query: 118 ITKARRTFDRALCALPVTQ 136
+ KAR+ RA+ + +
Sbjct: 487 LAKARKILGRAIGQTSINK 505
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 515 LRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYER 574
L +W ++LE G+ ES V+ER + ++ ++ A + + + F++A +Y R
Sbjct: 1661 LNVWVALLNLENMYGSQESLTKVFERAVQYNEPL-KVFLHLADIYTKSEKFQEAGELYNR 1719
Query: 575 GVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLE 634
+K F+ K +WV Y F+ R GK E + + + A+E P + ++A+LE
Sbjct: 1720 MLKRFR--QEKAVWVKY-GAFLLRRGKA--EASHRVMQRALECLPKKEHVDVIAKFAQLE 1774
Query: 635 EDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDK 694
G A+RA +++ P ++ ++ +YI + + R I+E+ I L K
Sbjct: 1775 FQLGDAERARAIFESTLSIYP--KRTDVWSVYIDMIIKHGSQKEARAIFERVIHLSLAPK 1832
Query: 695 DVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSD 732
+K +Y + EK G + + A ++ + +S
Sbjct: 1833 RMKFFFKRYLDYEKQHGSEKDVQAVKAKALEYVEAKSS 1870
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 93/245 (37%), Gaps = 65/245 (26%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVN--YKTVDHLASIWC------EWAEMELRH-K 475
+WVA L Y + +F++AVQ N K HLA I+ E E+ R K
Sbjct: 1663 VWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLK 1722
Query: 476 NFK---------GALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEE 526
F+ GA L+RR AE S V +R E + K H + + + LE
Sbjct: 1723 RFRQEKAVWVKYGAF-LLRRGKAEASHRVMQRAL----ECLPKKEH--VDVIAKFAQLEF 1775
Query: 527 SLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKD 586
LG+ E RA++E L + YP D
Sbjct: 1776 QLGDAERARAIFESTLSI------------------------------------YPKRTD 1799
Query: 587 IWVTYLSKFVKRYGKTKLERARELFENAVETAPADA-VKPLYLQYAKLEEDYGLAKRAMK 645
+W Y+ +K +G K AR +FE + + A +K + +Y E+ +G K
Sbjct: 1800 VWSVYIDMIIK-HGSQK--EARAIFERVIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQA 1856
Query: 646 VYDQA 650
V +A
Sbjct: 1857 VKAKA 1861
Score = 40.8 bits (94), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 565 FEDAFRVYERGVKIFKYPHVK---DIWVTYLSKFVKRYGKTKLERARELFENAVE-TAPA 620
E A V ER +K + + ++WV L+ YG E ++FE AV+ P
Sbjct: 1638 IEKARAVAERALKTISFREEQEKLNVWVALLN-LENMYGSQ--ESLTKVFERAVQYNEPL 1694
Query: 621 DA---VKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVP 677
+ +Y + K +E L R +K + Q KAV K G + + +A
Sbjct: 1695 KVFLHLADIYTKSEKFQEAGELYNRMLKRFRQE-KAV--WVKYGAFLLRRGKAE------ 1745
Query: 678 KTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWN 737
+ + ++A+E LP K+ + K+A+LE LG+ +RAR I F S + T+ W+
Sbjct: 1746 ASHRVMQRALEC-LPKKEHVDVIAKFAQLEFQLGDAERARAI--FESTLSIYPKRTDVWS 1802
Query: 738 RWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQRLSIDDAK 790
+ + + HG++ R + +S + + F YL + Q S D +
Sbjct: 1803 VYIDMIIKHGSQKEARAIFERVIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQ 1855
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 214/552 (38%), Gaps = 136/552 (24%)
Query: 251 LWTSLADYYIRRELFEKARDIFEEGMMTVVTVRDFSVIF-------DSYSQFEEIMV--- 300
LW +LA R E +E A+ + + T+ T + + + S+ E+IM
Sbjct: 406 LWLALA----RLETYENAKKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGV 461
Query: 301 -----SAKMAKPDLSVEEEEDDEEHGSAEDEDIRLDVNLSMAEFVKKVLNGFWLHDVKDV 355
+ M + D + E E E G+ + A+ + G L +
Sbjct: 462 SELQATGGMLQRDQWLSEAEKCETEGA-----------VITAQAIINTCLGVGLDEEDQF 510
Query: 356 DLRLARLEHLMNRRP-ELANSVL---LRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVR 411
D L + + R+ + A +V LR P + + W R V++ +++ TE+V
Sbjct: 511 DTWLDDAQSFIARKCIDCARAVFAFSLRVYPKSEKLWLRAVEL------EKLYGTTESVC 564
Query: 412 TV--DPMKAVGKPHTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAE 469
++ +++ K LW+ +AK + DIA AR I +A + N + + IW
Sbjct: 565 SILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEE----IWLAAVR 620
Query: 470 MELRHKNFKGALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLG 529
+E + + A +L+ RA E E R+WT + L
Sbjct: 621 IEFVNNENERARKLLARARIESGTE---------------------RIWTKSISL----- 654
Query: 530 NLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWV 589
ERILD + + A ++ E +KI YPH +
Sbjct: 655 ---------ERILDEK--------------------DRALQLLENALKI--YPHYDKL-- 681
Query: 590 TYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQ 649
Y+ K K ++E AR+ + + P PL+L AKLEE + RA V+D+
Sbjct: 682 -YMMKGQIFEDKEQIELARDAYLAGTKVCPYSI--PLWLLLAKLEEKQSVI-RARVVFDR 737
Query: 650 ATKAVPNHEKL------------GMYEIYIARAAEIFGVPKTREIYEQAI------ESGL 691
A P +E L + ++ A A + P + ++ +AI +
Sbjct: 738 AKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKT 797
Query: 692 PDKDVKAMCLKYAELEKSLGEI-------DRARGIYVFASQFADPRSDTEFWNRWHEFEV 744
D C A L ++ + D+AR ++ A + AD + + + W ++++ +
Sbjct: 798 RATDALRKCEGNAHLLCTIARMLWLEKKADKARSWFLKAVK-AD-QDNGDVWCWFYKYSL 855
Query: 745 NHGNEDTFREML 756
GNED +E+L
Sbjct: 856 EAGNEDQQKEVL 867
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 103/217 (47%), Gaps = 8/217 (3%)
Query: 515 LRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYER 574
L +W ++LE G+ ES V+ER + ++ ++ A + + + F++A +Y R
Sbjct: 1658 LNVWVALLNLENMYGSQESLTKVFERAVQYNEPL-KVFLHLADIYAKSEKFQEAGELYNR 1716
Query: 575 GVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLE 634
+K F+ K +W+ Y + ++R ++ + + + A+E P+ + ++A+LE
Sbjct: 1717 MLKRFR--QEKAVWIKYGAFLLRR---SQAAASHRVLQRALECLPSKEHVDVIAKFAQLE 1771
Query: 635 EDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDK 694
G A+RA +++ P ++ ++ +YI + R+I+E+ I L K
Sbjct: 1772 FQLGDAERAKAIFENTLSTYP--KRTDVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPK 1829
Query: 695 DVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRS 731
+K +Y + EK G + + A ++ + +S
Sbjct: 1830 RMKFFFKRYLDYEKQHGTEKDVQAVKAKALEYVEAKS 1866
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 565 FEDAFRVYERGVKIFKYPHVK---DIWVTYLSKFVKRYGKTKLERARELFENAVE-TAPA 620
E A V ER +K + + ++WV L+ YG E ++FE AV+ P
Sbjct: 1635 IEKARAVAERALKTISFREEQEKLNVWVALLN-LENMYGSQ--ESLTKVFERAVQYNEPL 1691
Query: 621 DA---VKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVP 677
+ +Y + K +E L R +K + Q KAV K G + + ++AA
Sbjct: 1692 KVFLHLADIYAKSEKFQEAGELYNRMLKRFRQE-KAV--WIKYGAFLLRRSQAAA----- 1743
Query: 678 KTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWN 737
+ + ++A+E LP K+ + K+A+LE LG+ +RA+ I F + + T+ W+
Sbjct: 1744 -SHRVLQRALEC-LPSKEHVDVIAKFAQLEFQLGDAERAKAI--FENTLSTYPKRTDVWS 1799
Query: 738 RWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFILPEYL 777
+ + + HG++ R++ +S + + F YL
Sbjct: 1800 VYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYL 1839
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 94/249 (37%), Gaps = 65/249 (26%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVN--YKTVDHLASIWCEWAEM----ELRHKNFK 478
+WVA L Y + +F++AVQ N K HLA I+ + + EL ++ K
Sbjct: 1660 VWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLK 1719
Query: 479 ------------GALELMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEE 526
GA L+RR+ A S V +R E + K H + + + LE
Sbjct: 1720 RFRQEKAVWIKYGAF-LLRRSQAAASHRVLQRAL----ECLPSKEH--VDVIAKFAQLEF 1772
Query: 527 SLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKD 586
LG+ E +A++E L YP D
Sbjct: 1773 QLGDAERAKAIFENTLS------------------------------------TYPKRTD 1796
Query: 587 IWVTYLSKFVKRYGKTKLERARELFENAVETAPADA-VKPLYLQYAKLEEDYGLAKRAMK 645
+W Y+ +K +G K R++FE + + A +K + +Y E+ +G K
Sbjct: 1797 VWSVYIDMTIK-HGSQK--DVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQA 1853
Query: 646 VYDQATKAV 654
V +A + V
Sbjct: 1854 VKAKALEYV 1862
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 103/218 (47%), Gaps = 8/218 (3%)
Query: 515 LRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYER 574
L +W ++LE G+ ES V+ER + ++ ++ A + + + +++A +Y R
Sbjct: 1649 LNVWVALLNLENMYGSQESLTKVFERAVQYNEPL-KVFLHLADIYTKSEKYKEAGELYNR 1707
Query: 575 GVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLE 634
+K F+ K +W+ Y FV G+++ + + + A+E PA + +++A+LE
Sbjct: 1708 MLKRFR--QEKAVWIKY-GAFV--LGRSQAGASHRVLQRALECLPAKEHVDVIVKFAQLE 1762
Query: 635 EDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDK 694
G +RA +++ P ++ ++ +YI + R+I+E+ I L K
Sbjct: 1763 FQLGDVERAKAIFENTLSTYP--KRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPK 1820
Query: 695 DVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSD 732
+K +Y + EK G + + A ++ + +S
Sbjct: 1821 RMKFFFKRYLDYEKQHGTEKDVQAVKAKALEYVEAKSS 1858
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 565 FEDAFRVYERGVKIFKYPHVK---DIWVTYLSKFVKRYGKTKLERARELFENAVE-TAPA 620
E A V ER +K + + ++WV L+ YG E ++FE AV+ P
Sbjct: 1626 IEKARAVAERALKTISFREEQEKLNVWVALLN-LENMYGSQ--ESLTKVFERAVQYNEPL 1682
Query: 621 DA---VKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFG-- 675
+ +Y + K +E L R +K + Q KAV +I A + G
Sbjct: 1683 KVFLHLADIYTKSEKYKEAGELYNRMLKRFRQE-KAV-----------WIKYGAFVLGRS 1730
Query: 676 -VPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTE 734
+ + ++A+E LP K+ + +K+A+LE LG+++RA+ I F + + T+
Sbjct: 1731 QAGASHRVLQRALEC-LPAKEHVDVIVKFAQLEFQLGDVERAKAI--FENTLSTYPKRTD 1787
Query: 735 FWNRWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFILPEYL 777
W+ + + + HG++ R++ +S + + F YL
Sbjct: 1788 VWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPKRMKFFFKRYL 1830
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 37/231 (16%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVN--YKTVDHLASIWCEWAEMELRHKNFKGALE 482
+WVA L Y + +F++AVQ N K HLA I+ + + +K A E
Sbjct: 1651 VWVALLNLENMYGSQESLTKVFERAVQYNEPLKVFLHLADIYT-------KSEKYKEAGE 1703
Query: 483 LMRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERIL 542
L R + + +W Y ++ V +R L
Sbjct: 1704 LYNRMLK--------------------RFRQEKAVWIKYGAFVLGRSQAGASHRVLQRAL 1743
Query: 543 DLRIATPQ--IIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYG 600
+ A +I+ +A L + E A ++E + YP D+W Y+ +K
Sbjct: 1744 ECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFEN--TLSTYPKRTDVWSVYIDMTIKHGS 1801
Query: 601 KTKLERARELFENAVETAPADA-VKPLYLQYAKLEEDYGLAKRAMKVYDQA 650
+T + R++FE + + A +K + +Y E+ +G K V +A
Sbjct: 1802 QTAV---RDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKA 1849
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 38/314 (12%)
Query: 425 LWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALEL- 483
+W A+ L ++ AR ++D AV V+ A W +W +E NF A +L
Sbjct: 198 IWSAWGWLEARTGNVERARKLYDAAVVVD----GTHACAWHKWGMLEKGQGNFTRARDLW 253
Query: 484 ---MRRATAEPSVEVRRRVAADGNEPVQM-----------------KLHKSLRLWTFYVD 523
++R +P + A G Q+ + S+ LW +
Sbjct: 254 MQGIQRCRRKPQSQNAYLYNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAV 313
Query: 524 LEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKY-P 582
LE G+ R ++ + L + + + +AL + + RG ++ P
Sbjct: 314 LEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDP 373
Query: 583 HVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKR 642
+ W K+ G+ +ERARELFE + P+D ++ Y +E + G R
Sbjct: 374 ALYQAWAL----VEKQAGR--IERARELFEQGLRADPSDLY--MWQAYGVMEAEQGNMDR 425
Query: 643 AMKVYDQATKAVP-NHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCL 701
A +++ + A P + + ++ + A + V RE+++ A+ D +
Sbjct: 426 ARQLFQEGVWADPRSPSTVYVFHAWGALEWQAGNVQTARELFKAAVRV---DPKSETTWA 482
Query: 702 KYAELEKSLGEIDR 715
+ +E LGEI+R
Sbjct: 483 SWIAMESELGEIER 496
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 42/277 (15%)
Query: 517 LWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGV 576
+W+ + LE GN+E R +Y+ + + + +L + F A ++ +G+
Sbjct: 198 IWSAWGWLEARTGNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGI 257
Query: 577 -KIFKYPHVKDIWV-TYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLE 634
+ + P ++ ++ L + G ++ AR FE +A A L+ +A LE
Sbjct: 258 QRCRRKPQSQNAYLYNALGCMAAQLG--RVGEARSWFEEGTRSAEGAASVALWQAWAVLE 315
Query: 635 EDYGLAKRAMKVYDQATKAVP--------------------------------NHEKLGM 662
G ++ +A A P N +
Sbjct: 316 AKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPAL 375
Query: 663 YEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVF 722
Y+ + + + + RE++EQ + + D M Y +E G +DRAR ++
Sbjct: 376 YQAWALVEKQAGRIERARELFEQGLRA---DPSDLYMWQAYGVMEAEQGNMDRARQLFQ- 431
Query: 723 ASQFADPRSDTEFW--NRWHEFEVNHGNEDTFREMLR 757
+ADPRS + + + W E GN T RE+ +
Sbjct: 432 EGVWADPRSPSTVYVFHAWGALEWQAGNVQTARELFK 468
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 432 LYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELM-RRATAE 490
LY T K ++AR +FD+ + N + + + + E ++ L + F E++ +R +
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF---CEMIGKRFCPD 213
Query: 491 PSVEVRRRVAADGNEPVQMKLHK---------SLRLWTFYVDLEESLGNLESTRAVYERI 541
+ V A GN + +H + RL T VD+ G LE R V+ER+
Sbjct: 214 ETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM 273
Query: 542 LDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK 601
+D + T +I + L ++ + E+A +++ K+ K V+ +VT+L
Sbjct: 274 VDKNVWTWSAMI---VGLAQYGFAEEALQLFS---KMMKESSVRPNYVTFLGVLCACSHT 327
Query: 602 TKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYD 648
++ + F E +KP+ + Y + + G A R + YD
Sbjct: 328 GLVDDGYKYFH---EMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2
SV=1
Length = 941
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 79/354 (22%)
Query: 422 PH--TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEME-------- 471
PH W+A A+L E + AR + K ++ K+ D +W E A ++
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSED----VWLEAARLQPGDTAKAV 361
Query: 472 ----LRHKNFKGALEL-MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEE 526
+RH ++ + +R A E + ++RV E V S+RLW V+LEE
Sbjct: 362 VAQAVRH--LPQSVRIYIRAAELETDIRAKKRVLRKALEHVP----NSVRLWKAAVELEE 415
Query: 527 SLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKD 586
EDA + R V+ P +
Sbjct: 416 P--------------------------------------EDARIMLSRAVECC--PTSVE 435
Query: 587 IWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKV 646
+W+ L++ E AR++ A E P D + +++ AKLEE G + K+
Sbjct: 436 LWLA-LARL------ETYENARKVLNKARENIPTD--RHIWITAAKLEEANGNTQMVEKI 486
Query: 647 YDQATKAVPNHEKLGMYEIYIARAAEI---FGVPKTREIYEQAIESGLPDKDVKAMCLKY 703
D+A ++ + E +I A E V + + I G+ ++D K ++
Sbjct: 487 IDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMED 546
Query: 704 AELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR 757
A+ + ++ AR IY +A Q S W R FE NHG ++ +L+
Sbjct: 547 ADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAAYFEKNHGTRESLEALLQ 598
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 145/378 (38%), Gaps = 66/378 (17%)
Query: 423 HTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALE 482
HT W+ A + + AR I+ A+QV S+W A E H +
Sbjct: 541 HT-WMEDADSCVAHNALECARAIYAYALQV----FPSKKSVWLRAAYFEKNHGTRESLEA 595
Query: 483 LMRRATAE-PSVEVRRRVAAD-----GNEPVQMKL--------HKSLRLWTFYVDLEESL 528
L++RA A P EV + A G+ P + S +W V LE
Sbjct: 596 LLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESEN 655
Query: 529 GNLESTRAVYERILD----LRIATPQIIINYAL--LLEEHKYFEDAFRVYERGVKIFKYP 582
E R + + R+ + + + L + + E+A R YE +P
Sbjct: 656 NEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQELCEEALRHYE------DFP 709
Query: 583 HVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKR 642
+W+ + ++ G+ +ERARE + ++ P PL+L ++LEE G R
Sbjct: 710 K---LWM--MKGQIEEQGEL-MERAREAYNQGLKKCPHST--PLWLLLSRLEEKIGQLTR 761
Query: 643 AMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKT--REIYEQAIESGL--------- 691
A + +++ P + L + + + A + + T + ++ SG+
Sbjct: 762 ARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLE 821
Query: 692 --PDKDVKAM-----C-------LKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWN 737
P + K++ C L A+L S +I +AR + + D W
Sbjct: 822 ARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDA--WA 879
Query: 738 RWHEFEVNHGNEDTFREM 755
+++FE+ HG E+ E+
Sbjct: 880 FFYKFELQHGTEEQQEEV 897
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 79/354 (22%)
Query: 422 PH--TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEME-------- 471
PH W+A A+L E + AR + K ++ K+ D +W E A ++
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSED----VWLEAARLQPGDTAKAV 361
Query: 472 ----LRHKNFKGALEL-MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEE 526
+RH ++ + +R A E + ++RV E V S+RLW V+LEE
Sbjct: 362 VAQAVRH--LPQSVRIYIRAAELETDIRAKKRVLRKALEHVP----NSVRLWKAAVELEE 415
Query: 527 SLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKD 586
EDA + R V+ P +
Sbjct: 416 P--------------------------------------EDARIMLSRAVECC--PTSVE 435
Query: 587 IWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKV 646
+W+ L++ E AR++ A E P D + +++ AKLEE G + K+
Sbjct: 436 LWLA-LARL------ETYENARKVLNKARENIPTD--RHIWITAAKLEEANGNTQMVEKI 486
Query: 647 YDQATKAVPNHEKLGMYEIYIARAAEI---FGVPKTREIYEQAIESGLPDKDVKAMCLKY 703
D+A ++ + E +I A E V + + I G+ ++D K ++
Sbjct: 487 IDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMED 546
Query: 704 AELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR 757
A+ + ++ AR IY +A Q S W R FE NHG ++ +L+
Sbjct: 547 ADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAAYFEKNHGTRESLEALLQ 598
Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 145/378 (38%), Gaps = 66/378 (17%)
Query: 423 HTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALE 482
HT W+ A + + AR I+ A+QV S+W A E H +
Sbjct: 541 HT-WMEDADSCVAHNALECARAIYAYALQV----FPSKKSVWLRAAYFEKNHGTRESLEA 595
Query: 483 LMRRATAE-PSVEVRRRVAAD-----GNEPVQMKL--------HKSLRLWTFYVDLEESL 528
L++RA A P EV + A G+ P + S +W V LE
Sbjct: 596 LLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESEN 655
Query: 529 GNLESTRAVYERILD----LRIATPQIIINYAL--LLEEHKYFEDAFRVYERGVKIFKYP 582
E R + + R+ + + + L + + E+A R YE +P
Sbjct: 656 NEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQELCEEALRHYE------DFP 709
Query: 583 HVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKR 642
+W+ + ++ G+ +E+ARE + ++ P PL+L ++LEE G R
Sbjct: 710 K---LWM--MKGQIEEQGEL-MEKAREAYNQGLKKCPHST--PLWLLLSRLEEKIGQLTR 761
Query: 643 AMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKT--REIYEQAIESGL--------- 691
A + +++ P + L + + + A + + T + ++ SG+
Sbjct: 762 ARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLE 821
Query: 692 --PDKDVKAM-----C-------LKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWN 737
P + K++ C L A+L S +I +AR + + D W
Sbjct: 822 ARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDA--WA 879
Query: 738 RWHEFEVNHGNEDTFREM 755
+++FE+ HG E+ E+
Sbjct: 880 FFYKFELQHGTEEQQEEV 897
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 79/354 (22%)
Query: 422 PH--TLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEME-------- 471
PH W+A A+L E + AR + K ++ K+ D +W E A ++
Sbjct: 306 PHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSED----VWLEAARLQPGDTAKAV 361
Query: 472 ----LRHKNFKGALEL-MRRATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEE 526
+RH ++ + +R A E + ++RV E V S+RLW V+LEE
Sbjct: 362 VAQAVRH--LPQSVRIYIRAAELETDIRAKKRVLRKALEHVP----NSVRLWKAAVELEE 415
Query: 527 SLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKD 586
EDA + R V+ P +
Sbjct: 416 P--------------------------------------EDARIMLSRAVECC--PTSVE 435
Query: 587 IWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKV 646
+W+ L++ E AR++ A E P D + +++ AKLEE G + K+
Sbjct: 436 LWLA-LARL------ETYENARKVLNKARENIPTD--RHIWITAAKLEEANGNTQMVEKI 486
Query: 647 YDQATKAVPNHEKLGMYEIYIARAAEI---FGVPKTREIYEQAIESGLPDKDVKAMCLKY 703
D+A ++ + E +I A E V + + I G+ ++D K ++
Sbjct: 487 IDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMED 546
Query: 704 AELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLR 757
A+ + ++ AR IY +A Q S W R FE NHG ++ +L+
Sbjct: 547 ADSCVAHNALECARAIYAYALQVFP--SKKSVWLRAAYFEKNHGTRESLEALLQ 598
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 148/386 (38%), Gaps = 66/386 (17%)
Query: 423 HTLWVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALE 482
HT W+ A + + AR I+ A+QV S+W A E H +
Sbjct: 541 HT-WMEDADSCVAHNALECARAIYAYALQV----FPSKKSVWLRAAYFEKNHGTRESLEA 595
Query: 483 LMRRATAE-PSVEVRRRVAAD-----GNEPVQMKL--------HKSLRLWTFYVDLEESL 528
L++RA A P EV + A G+ P + S +W V LE
Sbjct: 596 LLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESEN 655
Query: 529 GNLESTRAVYERILDLRIATPQI-IINYALLLEEHKYFEDAFR----VYERGVKIFKYPH 583
E R + + R + P + ++ LE + +D R + E ++ H
Sbjct: 656 DEYERARRLLAKA---RSSAPTARVFMKSVKLE---WVQDNIRAAQDLCEEALR-----H 704
Query: 584 VKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRA 643
+D ++ K K +E+ARE + ++ P PL+L ++LEE G RA
Sbjct: 705 YEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHST--PLWLLLSRLEEKIGQLTRA 762
Query: 644 MKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKT--REIYEQAIESGL---------- 691
+ +++ P + L + + + A + + T + ++ SG+
Sbjct: 763 RAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEA 822
Query: 692 -PDKDVKAM-----C-------LKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNR 738
P + K++ C L A+L S +I +AR + + D W
Sbjct: 823 RPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDA--WAF 880
Query: 739 WHEFEVNHGNEDTFREMLRIKRSVSA 764
+++FE+ HG E+ E+ KR SA
Sbjct: 881 FYKFELQHGTEEQQEEVR--KRCESA 904
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 89 NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPVTQHDRIWEIYLRFV 148
+ +ERAL+ H +WI Y+++ K I AR DRA ALP D++W YL
Sbjct: 84 SIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV--DKLWFKYLLL- 140
Query: 149 EQEGIPIETSLR-VYRRYLKYDPS--HIEDFIEF 179
+E + + +R +Y R+ ++P + FIEF
Sbjct: 141 -EESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEF 173
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Query: 599 YGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHE 658
+ + + RAR ++E A+ PL++QY E + A + D+AT A+P +
Sbjct: 74 FDQKDIRRARSIYERAL--LVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRVD 131
Query: 659 KLGMYEIYIARAAEIFGVPKTREIYEQ--AIESGLPDKDVKAMCLKYAELEKSLGEIDRA 716
KL + + + G+ R IY + + E G PD + E E +
Sbjct: 132 KLWFKYLLLEESLGNQGI--VRGIYTRWCSFEPG-PD-----AWDSFIEFETRCLNFENV 183
Query: 717 RGIYVFASQFA--DPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFI 772
R IY S+F P+ DT W +W FE HG+ + R + S+S T +
Sbjct: 184 RNIY---SKFVLVHPQIDT--WLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLV 236
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 520 FYVDLEESLGNLESTRAVYERILDL----RIATPQIIINYALLLEEHKYFEDAFRVYERG 575
+ V LE ++ +L + R+VY+ ILD+ + ++ I YA A ++ G
Sbjct: 365 YLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKIL--G 422
Query: 576 VKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEE 635
V + K P K ++ Y++ ++ + +R R+L+E ++ P+ +L YA+LEE
Sbjct: 423 VSLGKSPKPK-VFKYYINLEIRL---KEFDRVRKLYEKYIDFNPSSVQS--WLDYAELEE 476
Query: 636 DYGLAKRAMKVYDQATK---AVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAI 687
+ G R+ +YD + + ++L + + YIA + K RE+YE+ +
Sbjct: 477 NLGDEDRSRGIYDISMSNNVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYL 531
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 140/338 (41%), Gaps = 59/338 (17%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKN-------FK 478
W +F + + N R I+ K V V + +D W +W E H + F
Sbjct: 167 WDSFIEFETRCLNFENVRNIYSKFVLV-HPQID----TWLKWVRFEQTHGDISSVRTVFS 221
Query: 479 GALELMRRATAEPSVEVRRRVAADGN-EPVQMKLHKSLRLWTFYVD-------------- 523
AL+ + + P V++ R + + + E Q + +S L+ V+
Sbjct: 222 FALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERSRTLYRLAVERWPISEALKEQQIQ 281
Query: 524 LEESLG---NLEST-----RAVYERILD---LRIATPQIIINYALLLEEHKYFEDAFRVY 572
E+ G N+E +A YE+ L +T + I+ L E KY E +
Sbjct: 282 FEKKFGSSKNMEDIVIAKRKAEYEQYLKSDPYHYSTWWVYID----LVEEKYQEQLTSAF 337
Query: 573 ERGVKIFKYPH-VKDI-WVTYLSKFVKRY------GKTKLERARELFENAVETAPAD--A 622
+ +++ K VKD W Y+ + RY L R ++++ ++ P
Sbjct: 338 QSFIELAKPKSLVKDSSWKRYI-RICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFT 396
Query: 623 VKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREI 682
L++ YA+ E +A K+ + P K +++ YI + + R++
Sbjct: 397 FGKLWIMYAEFEIRQNNLLKARKILGVSLGKSP---KPKVFKYYINLEIRLKEFDRVRKL 453
Query: 683 YEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIY 720
YE+ I+ V++ L YAELE++LG+ DR+RGIY
Sbjct: 454 YEKYID--FNPSSVQS-WLDYAELEENLGDEDRSRGIY 488
Score = 37.4 bits (85), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALK-ALPGSY---KLWHAYLIERL 71
YE+ L +P+ WW Y+ E ++ ++ ++ A P S W Y+ +
Sbjct: 304 YEQYLKSDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICV 363
Query: 72 SIVKNLPITHPEYETLNNTFERAL-VTMHK---MPRIWIMYLETLTSQKFITKARRTFDR 127
+ L +T + T+ + ++ L + HK ++WIMY E Q + KAR+
Sbjct: 364 RYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGV 423
Query: 128 ALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+L P ++++ Y+ +E + ++Y +Y+ ++PS ++ ++++
Sbjct: 424 SLGKSP---KPKVFKYYIN-LEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDY 471
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 16 YEEELLRNPFSLKLWWRYLVAK-REAPFKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
YE L RN L+ W RY + + ++ IYERAL G LW Y+ S +
Sbjct: 52 YETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYID---SEI 108
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYL---ETLTSQKFITKARRTFDRALCA 131
K I H N +RA + ++ ++W YL E+L +Q + R + R
Sbjct: 109 KWKNINHA-----RNLLDRATNALPRVDKLWFKYLLLEESLGNQGIV---RGIYTRWCSF 160
Query: 132 LPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
P W+ ++ F E + E +Y +++ P
Sbjct: 161 EPGPD---AWDSFIEF-ETRCLNFENVRNIYSKFVLVHP 195
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREA-PFKKRFVIYERALKALPGSYK----------LWH 64
YEE+LL +P WW YL E+ P + R + E +KA+P S + LW
Sbjct: 300 YEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALAEATVKAVPRSQEKDMQWRKYVNLWL 359
Query: 65 AYLIERLSIVKNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRT 124
YL+ +++ + +T Y+ L E T + WIMY E Q+ + KAR+
Sbjct: 360 RYLLFLETVLVDSDLTRSMYQKLVR--EVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKI 417
Query: 125 FDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHIEDFIEF 179
+L P ++++ Y+ +E + + R++ + L++ P + ++IE+
Sbjct: 418 LGMSLGMCP---KPKLFQYYID-LEIKLKEFDRVRRLHEKLLEFQPDVLSNWIEY 468
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 111/280 (39%), Gaps = 47/280 (16%)
Query: 426 WVAFAKLYETYKDIANARVIFDKAVQVNYKTVDHLASIWCEWAEMELRHKNFKGALELMR 485
W+ +A +D+ AR +F++A+ V V +W + + ELR ++ A L+
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDV----VVWLRYVDCELRARDVNHARNLLV 118
Query: 486 RATAEPSVEVRRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGNLESTRAVYERILDLR 545
RATA L + +LW YV +EESLG +E R VY + L
Sbjct: 119 RATA--------------------LLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLE 158
Query: 546 IATP--QIIINYALLLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTK 603
A +++ E VY R V + +P V W+ +++ F +++G
Sbjct: 159 PAAAAWDAFVDFET---RQGQVEHVREVYSRYVMV--HP-VAATWLKWVA-FERKHGDAG 211
Query: 604 LERARELFENAVETAPADA------VKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNH 657
R ++ A +T A A V+ L + +A+ E +R+ V A P
Sbjct: 212 T--VRRVYSLACDTLTAFAGADVHEVEQLVVSFAEWEATQQELERSRAVLSVAVSRWPES 269
Query: 658 EKLGMYEIYI------ARAAEIFGVPKTREIYEQAIESGL 691
L + ARA E + RE EQ + L
Sbjct: 270 STLKDATAQLEKKFGGARAGESILFKRKREYEEQLLAHPL 309
Score = 40.0 bits (92), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 13/156 (8%)
Query: 16 YEEELLRNPFSLKLWWRYLVAKREA-PFKKRFVIYERALKALPGSYKLWHAYLIERLSIV 74
+EE L RN ++ W RY + E ++ ++ERAL PG +W Y+ L
Sbjct: 49 FEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCEL--- 105
Query: 75 KNLPITHPEYETLNNTFERALVTMHKMPRIWIMYLETLTSQKFITKARRTFDRALCALPV 134
+ + H N RA + ++ ++W Y+ S + R + + P
Sbjct: 106 RARDVNHA-----RNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPA 160
Query: 135 TQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDP 170
W+ ++ F ++G +E VY RY+ P
Sbjct: 161 AA---AWDAFVDFETRQG-QVEHVREVYSRYVMVHP 192
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 627 YLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQA 686
++ YA+ E +A K+ + P K +++ YI ++ + R ++E+
Sbjct: 398 WIMYAEFEIRQEKLDKARKILGMSLGMCP---KPKLFQYYIDLEIKLKEFDRVRRLHEKL 454
Query: 687 IESGLPDKDVKAMCLKYAELEKSLGEIDRARGIY 720
+E DV + ++YAELE++LG+ DRARGIY
Sbjct: 455 LEF---QPDVLSNWIEYAELEENLGDEDRARGIY 485
Score = 36.6 bits (83), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 44/157 (28%)
Query: 599 YGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHE 658
Y + + RAR +FE A+ AP D V ++L+Y E A + +AT +P +
Sbjct: 71 YEQRDMRRARSVFERALAVAPGDVV--VWLRYVDCELRARDVNHARNLLVRATALLPRVD 128
Query: 659 KLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARG 718
KL KY +E+SLG+++ RG
Sbjct: 129 KL---------------------------------------WYKYVLMEESLGQVELVRG 149
Query: 719 IYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREM 755
+Y +++ W+ + +FE G + RE+
Sbjct: 150 VY---TKWCTLEPAAAAWDAFVDFETRQGQVEHVREV 183
Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 509 MKLHKSLRLWTFYV-DLEESLGNLESTRAVYERIL-----DLRIATPQIIINYALLLEEH 562
M+ K + LW Y+ LE L + + TR++Y++++ + + + I YA
Sbjct: 349 MQWRKYVNLWLRYLLFLETVLVDSDLTRSMYQKLVREVIPNTKFTFAKAWIMYAEFEIRQ 408
Query: 563 KYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADA 622
+ + A ++ + + P + ++ K + +R R L E +E P
Sbjct: 409 EKLDKARKILGMSLGMCPKPKLFQYYIDLEIKL------KEFDRVRRLHEKLLEFQPD-- 460
Query: 623 VKPLYLQYAKLEEDYGLAKRAMKVYD---QATKAVPNHEKLGMYEIYIARAAEIFGVPKT 679
V +++YA+LEE+ G RA +Y+ A + +L + + YI + +
Sbjct: 461 VLSNWIEYAELEENLGDEDRARGIYEIGLTADGGLSQARQLQLMQRYIQFETDASEFERA 520
Query: 680 REIYEQAIESGLPDKDVKAMCLKY 703
R +Y + + D +V C Y
Sbjct: 521 RALYSRYVALSGYDPNVWISCALY 544
Score = 33.5 bits (75), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 70 RLSIVKNLPITHPEYETLN-----NTFERALVTMHKMPRIWIMYLETLTSQKFITKARRT 124
RL + + L EYE + + FERAL +W+ Y++ + + AR
Sbjct: 57 RLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNL 116
Query: 125 FDRALCALPVTQHDRIWEIYLRFVEQEGIPIETSLRVYRRYLKYDPSHI--EDFIEF 179
RA LP + D++W Y+ E G +E VY ++ +P+ + F++F
Sbjct: 117 LVRATALLP--RVDKLWYKYVLMEESLG-QVELVRGVYTKWCTLEPAAAAWDAFVDF 170
>sp|P25991|SUF_DROME Protein suppressor of forked OS=Drosophila melanogaster GN=su(f)
PE=1 SV=2
Length = 765
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 32/249 (12%)
Query: 600 GKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEK 659
G+ K E+ ++ ++ D +Y+QY K K A ++ +A + V +
Sbjct: 385 GRLKYEKVHTMYNKLLQLPDIDPTL-VYVQYMKFARRAEGIKSARSIFKKAREDVRSR-- 441
Query: 660 LGMYEIYIARAAEIFGVPKTREIYEQAIESGLP---DKDVKAMCLKYAELEKSLGEIDRA 716
Y I++A A + K +EI + E GL MC Y + L E +
Sbjct: 442 ---YHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMC--YIDYLSHLNEDNNT 496
Query: 717 RGIY--VFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASYSQTHFILP 774
R ++ V +S P E WNR+ EFE N G+ +++++R SA + L
Sbjct: 497 RVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGD---LSSIVKVERRRSAVFEN----LK 549
Query: 775 EYLMQKDQRLSIDDAKDKLKQAGVHEDEMAALERQLAPAANNGNAKDSSRKVGFVSAGVE 834
EY ++ +L D+ K ++ L+ + G A++ + V G +
Sbjct: 550 EYEGKETAQLV-----DRYKFLDLYPCTSTELK-------SIGYAENVGIILNKVGGGAQ 597
Query: 835 SQTDGGIKT 843
SQ G ++T
Sbjct: 598 SQNTGEVET 606
>sp|Q4KLU2|PRP39_XENLA Pre-mRNA-processing factor 39 OS=Xenopus laevis GN=prpf39 PE=2 SV=1
Length = 641
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 20/199 (10%)
Query: 515 LRLWTFYVDLEESLGNLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFRVYER 574
L W Y++ E G+ E ++ER + + I YA +E H E VY R
Sbjct: 324 LNNWKEYLEFELENGSNERIVILFERCVIACACYEEFWIKYAKYMENHS-VEGVRHVYNR 382
Query: 575 G--VKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAK 632
V + K P V +W + + + LE AR + +N +ETA + + + L+
Sbjct: 383 ACHVHLAKKPMVHLLWAAFEEQ------QGNLEEARRILKN-IETA-IEGLAMVRLRRVN 434
Query: 633 LEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIF----GVPKTREIYEQAIE 688
LE +G K A + ++A + Y I +AR +F V K R++ AI+
Sbjct: 435 LERRHGNVKEAEHLLEEAMNKTKTSSESSFYAIKLAR--HLFKVQANVVKARKVLSNAIQ 492
Query: 689 SGLPDKDVKAMCLKYAELE 707
DK+ + L E+E
Sbjct: 493 K---DKENTKLYLNLLEME 508
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 343,612,380
Number of Sequences: 539616
Number of extensions: 14894905
Number of successful extensions: 57696
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 55933
Number of HSP's gapped (non-prelim): 1076
length of query: 917
length of database: 191,569,459
effective HSP length: 127
effective length of query: 790
effective length of database: 123,038,227
effective search space: 97200199330
effective search space used: 97200199330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)