Query 002479
Match_columns 917
No_of_seqs 788 out of 3773
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 00:45:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002479.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002479hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 1E-132 3E-137 1170.6 45.9 880 1-905 5-947 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 1.2E-62 2.6E-67 448.0 9.6 117 25-142 2-118 (118)
3 KOG4412 26S proteasome regulat 99.8 1.6E-21 3.4E-26 190.3 8.5 131 535-673 71-203 (226)
4 KOG4412 26S proteasome regulat 99.8 1.1E-20 2.4E-25 184.4 12.7 137 534-678 36-175 (226)
5 PHA02791 ankyrin-like protein; 99.8 5.3E-18 1.2E-22 185.3 16.4 130 534-673 92-225 (284)
6 KOG0509 Ankyrin repeat and DHH 99.8 2.7E-18 5.7E-23 196.0 13.8 131 534-672 76-208 (600)
7 PHA02791 ankyrin-like protein; 99.8 6E-18 1.3E-22 184.9 15.6 130 534-673 59-191 (284)
8 PHA02743 Viral ankyrin protein 99.8 5.2E-18 1.1E-22 171.5 13.7 134 535-674 19-160 (166)
9 PHA02875 ankyrin repeat protei 99.8 1.3E-17 2.8E-22 192.5 17.5 130 534-671 100-231 (413)
10 PHA02859 ankyrin repeat protei 99.7 3.7E-17 7.9E-22 171.6 16.9 133 534-674 49-191 (209)
11 KOG0509 Ankyrin repeat and DHH 99.7 8.6E-18 1.9E-22 191.9 11.4 137 534-677 110-247 (600)
12 PHA02741 hypothetical protein; 99.7 3.5E-17 7.6E-22 165.9 14.2 127 534-668 19-158 (169)
13 PHA02875 ankyrin repeat protei 99.7 5.9E-17 1.3E-21 187.1 16.7 132 534-673 66-199 (413)
14 PHA02736 Viral ankyrin protein 99.7 2.4E-17 5.1E-22 164.3 10.6 130 534-669 15-153 (154)
15 PHA02874 ankyrin repeat protei 99.7 1.1E-16 2.5E-21 186.1 17.9 143 533-677 121-290 (434)
16 PHA02878 ankyrin repeat protei 99.7 7.8E-17 1.7E-21 189.8 16.5 134 536-679 168-304 (477)
17 PHA03095 ankyrin-like protein; 99.7 2.6E-17 5.6E-22 193.1 12.1 249 399-669 51-317 (471)
18 PHA03100 ankyrin repeat protei 99.7 9.9E-17 2.1E-21 188.7 15.5 127 535-669 175-310 (480)
19 PLN03192 Voltage-dependent pot 99.7 5.4E-16 1.2E-20 193.8 22.8 131 536-674 525-687 (823)
20 PHA02878 ankyrin repeat protei 99.7 2.2E-16 4.8E-21 185.9 17.2 114 553-672 149-265 (477)
21 PHA02798 ankyrin-like protein; 99.7 1.7E-16 3.6E-21 187.5 16.0 162 520-682 89-298 (489)
22 PHA03100 ankyrin repeat protei 99.7 2.2E-16 4.8E-21 185.7 15.6 156 516-679 117-287 (480)
23 PHA02716 CPXV016; CPX019; EVM0 99.7 3E-16 6.5E-21 189.4 16.5 140 534-679 210-403 (764)
24 PHA02874 ankyrin repeat protei 99.7 4.7E-16 1E-20 181.0 17.2 108 560-673 114-221 (434)
25 KOG0508 Ankyrin repeat protein 99.7 9.4E-17 2E-21 176.1 10.2 121 534-663 115-236 (615)
26 KOG4177 Ankyrin [Cell wall/mem 99.7 2.2E-16 4.7E-21 193.8 13.7 250 399-668 378-632 (1143)
27 PHA02859 ankyrin repeat protei 99.7 5.1E-16 1.1E-20 163.0 14.3 132 536-677 21-160 (209)
28 PHA02884 ankyrin repeat protei 99.7 6.3E-16 1.4E-20 169.4 15.0 122 535-663 31-158 (300)
29 KOG0508 Ankyrin repeat protein 99.7 2.4E-16 5.1E-21 173.0 11.3 129 535-671 83-212 (615)
30 PHA02716 CPXV016; CPX019; EVM0 99.7 5.2E-16 1.1E-20 187.3 15.3 156 518-679 153-356 (764)
31 PHA02989 ankyrin repeat protei 99.7 9.8E-16 2.1E-20 181.2 16.8 146 533-679 105-293 (494)
32 PHA02795 ankyrin-like protein; 99.7 1E-15 2.2E-20 174.0 15.8 146 517-670 128-290 (437)
33 PHA02946 ankyin-like protein; 99.7 1.5E-15 3.1E-20 177.1 17.4 138 533-679 69-212 (446)
34 PHA02946 ankyin-like protein; 99.7 1.1E-15 2.4E-20 178.1 15.7 155 517-679 82-246 (446)
35 PHA03095 ankyrin-like protein; 99.6 1.4E-15 3E-20 178.5 16.3 129 535-671 46-183 (471)
36 KOG0502 Integral membrane anky 99.6 7.4E-16 1.6E-20 154.8 10.1 131 534-673 158-289 (296)
37 PHA02876 ankyrin repeat protei 99.6 2.5E-15 5.5E-20 184.6 16.9 140 533-679 338-480 (682)
38 PHA02876 ankyrin repeat protei 99.6 3.1E-15 6.7E-20 183.8 17.0 133 535-674 272-407 (682)
39 KOG0512 Fetal globin-inducing 99.6 1.4E-15 2.9E-20 147.9 10.4 128 538-673 65-196 (228)
40 KOG0510 Ankyrin repeat protein 99.6 1.7E-15 3.7E-20 175.9 12.1 134 534-672 271-407 (929)
41 PHA02798 ankyrin-like protein; 99.6 2.9E-15 6.4E-20 177.0 14.1 133 534-673 69-217 (489)
42 PHA02989 ankyrin repeat protei 99.6 4.5E-15 9.8E-20 175.6 15.6 151 517-673 47-216 (494)
43 KOG0195 Integrin-linked kinase 99.6 2.9E-15 6.4E-20 155.3 10.2 128 533-668 31-159 (448)
44 PF12796 Ank_2: Ankyrin repeat 99.6 8.4E-15 1.8E-19 131.8 11.0 88 574-671 1-88 (89)
45 KOG0502 Integral membrane anky 99.6 2.3E-15 4.9E-20 151.3 7.3 128 536-672 129-256 (296)
46 KOG0514 Ankyrin repeat protein 99.6 3.6E-15 7.8E-20 159.6 8.9 138 535-681 267-413 (452)
47 PHA02917 ankyrin-like protein; 99.6 2.7E-14 5.9E-19 173.0 16.9 122 538-668 105-256 (661)
48 PHA02917 ankyrin-like protein; 99.6 2.5E-14 5.4E-19 173.3 15.5 155 518-677 46-231 (661)
49 PHA02795 ankyrin-like protein; 99.6 2.4E-14 5.2E-19 163.0 13.8 136 534-679 114-258 (437)
50 KOG4177 Ankyrin [Cell wall/mem 99.6 1.2E-14 2.6E-19 178.6 11.9 148 528-683 466-614 (1143)
51 PHA02741 hypothetical protein; 99.5 2.2E-14 4.9E-19 145.4 11.2 107 563-675 14-132 (169)
52 KOG0514 Ankyrin repeat protein 99.5 2.9E-14 6.4E-19 152.7 12.2 123 536-664 302-429 (452)
53 PHA02730 ankyrin-like protein; 99.5 5.3E-14 1.1E-18 167.2 15.2 128 534-668 376-524 (672)
54 KOG0195 Integrin-linked kinase 99.5 1.4E-14 3E-19 150.4 8.6 112 560-677 24-135 (448)
55 PF12796 Ank_2: Ankyrin repeat 99.5 4E-14 8.7E-19 127.4 10.5 86 540-631 1-87 (89)
56 cd01175 IPT_COE IPT domain of 99.5 4.9E-14 1.1E-18 120.8 8.3 73 366-445 2-75 (85)
57 KOG0505 Myosin phosphatase, re 99.5 6.7E-14 1.4E-18 157.2 11.0 137 533-677 70-266 (527)
58 PHA02743 Viral ankyrin protein 99.5 7.8E-14 1.7E-18 141.1 9.7 110 560-675 10-128 (166)
59 KOG0510 Ankyrin repeat protein 99.5 2.5E-13 5.5E-18 158.1 14.4 149 527-677 145-308 (929)
60 PHA02884 ankyrin repeat protei 99.5 2.2E-13 4.8E-18 149.4 12.3 110 564-679 26-141 (300)
61 PHA02792 ankyrin-like protein; 99.5 3.1E-13 6.7E-18 159.2 13.8 142 519-668 320-479 (631)
62 KOG0505 Myosin phosphatase, re 99.5 1.6E-13 3.5E-18 154.2 10.3 140 538-679 42-235 (527)
63 cd00204 ANK ankyrin repeats; 99.4 1.6E-12 3.5E-17 121.9 14.4 121 534-662 5-126 (126)
64 PLN03192 Voltage-dependent pot 99.4 9.4E-13 2E-17 164.8 14.7 115 530-652 552-699 (823)
65 PHA02730 ankyrin-like protein; 99.4 7.1E-13 1.5E-17 157.7 12.7 133 534-669 39-182 (672)
66 KOG4214 Myotrophin and similar 99.4 3.5E-13 7.7E-18 118.4 7.5 104 539-650 5-108 (117)
67 KOG0520 Uncharacterized conser 99.4 1.1E-12 2.3E-17 157.6 12.8 455 400-903 413-922 (975)
68 COG0666 Arp FOG: Ankyrin repea 99.4 2.1E-12 4.5E-17 133.8 12.8 123 535-665 72-203 (235)
69 KOG0515 p53-interacting protei 99.4 6.8E-13 1.5E-17 147.2 9.1 120 539-665 553-675 (752)
70 KOG0507 CASK-interacting adapt 99.4 5.1E-13 1.1E-17 154.5 8.0 126 535-668 48-174 (854)
71 KOG1710 MYND Zn-finger and ank 99.4 1.9E-12 4.1E-17 134.9 11.1 125 533-665 9-135 (396)
72 PHA02792 ankyrin-like protein; 99.4 2.5E-12 5.4E-17 151.6 12.9 132 526-664 61-239 (631)
73 PHA02736 Viral ankyrin protein 99.4 1.3E-12 2.8E-17 130.2 8.7 97 534-630 53-153 (154)
74 TIGR00870 trp transient-recept 99.4 2.3E-12 4.9E-17 160.1 12.3 149 513-667 59-242 (743)
75 KOG0512 Fetal globin-inducing 99.3 3.1E-12 6.7E-17 124.8 9.3 121 533-664 94-217 (228)
76 TIGR00870 trp transient-recept 99.3 2.1E-12 4.6E-17 160.3 10.3 130 534-665 126-280 (743)
77 PF13857 Ank_5: Ankyrin repeat 99.3 3.6E-12 7.7E-17 105.0 4.7 55 589-649 1-56 (56)
78 cd00204 ANK ankyrin repeats; 99.3 4E-11 8.6E-16 112.4 12.3 100 565-670 2-101 (126)
79 PF13637 Ank_4: Ankyrin repeat 99.2 1.4E-11 3.1E-16 100.5 6.5 54 570-623 1-54 (54)
80 KOG4214 Myotrophin and similar 99.2 2.6E-11 5.6E-16 106.8 7.8 92 572-670 4-95 (117)
81 PTZ00322 6-phosphofructo-2-kin 99.2 3.2E-11 6.9E-16 147.2 11.5 105 538-650 84-196 (664)
82 PTZ00322 6-phosphofructo-2-kin 99.2 3.8E-11 8.3E-16 146.5 12.1 96 572-673 84-186 (664)
83 KOG0507 CASK-interacting adapt 99.2 1.4E-11 3E-16 142.9 7.1 133 538-678 5-151 (854)
84 KOG3676 Ca2+-permeable cation 99.2 6.2E-11 1.4E-15 139.4 11.8 123 536-664 184-330 (782)
85 PF13857 Ank_5: Ankyrin repeat 99.2 1.7E-11 3.6E-16 101.0 4.7 51 560-610 5-56 (56)
86 PF13637 Ank_4: Ankyrin repeat 99.1 1.2E-10 2.6E-15 95.0 6.6 54 603-662 1-54 (54)
87 KOG3676 Ca2+-permeable cation 99.1 2.1E-10 4.6E-15 135.0 10.7 132 534-672 141-305 (782)
88 COG0666 Arp FOG: Ankyrin repea 99.1 9.3E-10 2E-14 113.9 14.0 106 562-673 65-178 (235)
89 KOG0515 p53-interacting protei 99.0 4.1E-10 9E-15 125.5 8.5 89 574-668 554-642 (752)
90 KOG4369 RTK signaling protein 99.0 4.4E-10 9.6E-15 133.3 9.1 252 398-671 760-1056(2131)
91 PF01833 TIG: IPT/TIG domain; 99.0 1E-09 2.2E-14 97.6 7.5 83 366-452 2-85 (85)
92 cd01179 IPT_plexin_repeat2 Sec 99.0 3.2E-09 6.8E-14 95.3 9.5 82 366-453 2-84 (85)
93 KOG4369 RTK signaling protein 98.9 1.2E-09 2.6E-14 129.7 4.2 128 534-669 755-884 (2131)
94 cd00102 IPT Immunoglobulin-lik 98.8 1.2E-08 2.6E-13 91.8 9.2 83 366-453 2-88 (89)
95 KOG0818 GTPase-activating prot 98.8 1.8E-08 3.9E-13 112.0 11.3 97 563-665 120-223 (669)
96 KOG1710 MYND Zn-finger and ank 98.8 2.1E-08 4.6E-13 105.1 8.8 101 570-675 12-112 (396)
97 KOG0782 Predicted diacylglycer 98.7 3.9E-08 8.4E-13 110.4 9.3 121 538-665 868-990 (1004)
98 KOG0783 Uncharacterized conser 98.7 7.7E-09 1.7E-13 120.5 3.8 83 563-651 45-128 (1267)
99 KOG0506 Glutaminase (contains 98.6 5E-08 1.1E-12 108.2 5.6 94 567-666 503-597 (622)
100 cd00603 IPT_PCSR IPT domain of 98.5 4.3E-07 9.3E-12 82.1 9.4 84 366-453 2-89 (90)
101 PF13606 Ank_3: Ankyrin repeat 98.5 1.3E-07 2.9E-12 67.4 4.1 30 602-631 1-30 (30)
102 KOG0705 GTPase-activating prot 98.4 4.4E-07 9.5E-12 102.9 7.8 94 536-630 624-721 (749)
103 cd01180 IPT_plexin_repeat1 Fir 98.4 1E-06 2.3E-11 80.5 8.8 86 366-453 2-93 (94)
104 smart00429 IPT ig-like, plexin 98.4 8.6E-07 1.9E-11 80.1 8.1 83 365-452 2-89 (90)
105 KOG0506 Glutaminase (contains 98.3 4.3E-07 9.3E-12 101.0 5.2 94 535-629 505-599 (622)
106 KOG0522 Ankyrin repeat protein 98.3 1.1E-06 2.4E-11 99.6 7.9 88 538-625 22-110 (560)
107 PF00023 Ank: Ankyrin repeat H 98.3 9.2E-07 2E-11 64.5 4.3 30 602-631 1-30 (33)
108 KOG0818 GTPase-activating prot 98.3 2.3E-06 4.9E-11 95.7 9.0 87 538-625 135-222 (669)
109 KOG0522 Ankyrin repeat protein 98.3 2E-06 4.3E-11 97.6 8.2 87 572-664 22-110 (560)
110 KOG0160 Myosin class V heavy c 98.2 6.6E-06 1.4E-10 100.2 11.6 84 713-807 672-758 (862)
111 PF00023 Ank: Ankyrin repeat H 98.2 1.9E-06 4.1E-11 62.8 4.2 33 569-601 1-33 (33)
112 KOG0705 GTPase-activating prot 98.2 3.3E-06 7.2E-11 96.0 8.0 91 574-670 628-722 (749)
113 PF13606 Ank_3: Ankyrin repeat 98.2 1.8E-06 4E-11 61.6 3.8 30 569-598 1-30 (30)
114 KOG0160 Myosin class V heavy c 98.1 2.1E-05 4.5E-10 95.9 13.5 81 747-828 672-756 (862)
115 cd02849 CGTase_C_term Cgtase ( 98.1 1.6E-05 3.4E-10 70.6 8.6 79 365-452 3-81 (81)
116 KOG0521 Putative GTPase activa 98.1 3.7E-06 8E-11 103.1 6.1 100 559-664 643-744 (785)
117 cd01181 IPT_plexin_repeat3 Thi 98.1 1.1E-05 2.5E-10 74.4 7.7 72 366-440 2-81 (99)
118 COG5022 Myosin heavy chain [Cy 98.1 0.00017 3.6E-09 90.8 19.8 152 705-900 734-893 (1463)
119 KOG2384 Major histocompatibili 98.0 1.2E-05 2.7E-10 80.4 7.1 67 593-665 2-69 (223)
120 KOG0783 Uncharacterized conser 97.8 7.9E-06 1.7E-10 96.2 2.1 74 596-675 45-119 (1267)
121 KOG3609 Receptor-activated Ca2 97.7 0.00011 2.3E-09 88.2 9.8 128 535-671 24-160 (822)
122 cd00604 IPT_CGTD IPT domain (d 97.6 0.00022 4.7E-09 63.3 8.2 79 366-453 2-80 (81)
123 KOG0511 Ankyrin repeat protein 97.6 0.0001 2.3E-09 80.5 7.3 61 571-631 37-97 (516)
124 KOG0164 Myosin class I heavy c 97.6 0.0005 1.1E-08 80.5 13.1 62 768-837 697-758 (1001)
125 KOG2384 Major histocompatibili 97.5 0.00015 3.3E-09 72.7 6.5 71 560-630 2-73 (223)
126 KOG0511 Ankyrin repeat protein 97.5 0.00012 2.6E-09 80.0 5.8 106 604-725 37-142 (516)
127 KOG0164 Myosin class I heavy c 97.1 0.0031 6.7E-08 74.1 11.6 81 712-807 694-784 (1001)
128 KOG0521 Putative GTPase activa 97.0 0.00078 1.7E-08 83.1 5.4 90 534-625 654-744 (785)
129 KOG0782 Predicted diacylglycer 96.9 0.0016 3.4E-08 74.3 6.9 90 534-625 897-989 (1004)
130 KOG2505 Ankyrin repeat protein 96.9 0.0058 1.3E-07 69.5 10.7 71 583-662 404-480 (591)
131 PF00612 IQ: IQ calmodulin-bin 96.9 0.0015 3.2E-08 42.6 3.6 20 791-810 2-21 (21)
132 COG5022 Myosin heavy chain [Cy 96.7 0.026 5.7E-07 71.9 15.5 119 744-895 741-865 (1463)
133 smart00248 ANK ankyrin repeats 96.2 0.0084 1.8E-07 40.0 4.1 28 603-630 2-29 (30)
134 PF00612 IQ: IQ calmodulin-bin 96.0 0.01 2.2E-07 38.7 3.5 21 872-892 1-21 (21)
135 PTZ00014 myosin-A; Provisional 95.7 0.023 5E-07 71.0 7.9 35 792-826 779-813 (821)
136 KOG2128 Ras GTPase-activating 95.3 0.23 4.9E-06 63.4 14.7 145 718-895 481-645 (1401)
137 smart00015 IQ Short calmodulin 95.2 0.025 5.4E-07 38.9 3.3 21 790-810 3-23 (26)
138 KOG3610 Plexins (functional se 95.1 0.055 1.2E-06 68.0 8.5 87 362-454 140-230 (1025)
139 smart00248 ANK ankyrin repeats 95.0 0.035 7.7E-07 36.8 3.8 29 569-597 1-29 (30)
140 KOG2128 Ras GTPase-activating 94.9 0.075 1.6E-06 67.6 8.8 92 718-814 539-646 (1401)
141 KOG3609 Receptor-activated Ca2 94.9 0.046 9.9E-07 66.4 6.7 87 536-631 62-159 (822)
142 PTZ00014 myosin-A; Provisional 94.8 0.068 1.5E-06 66.9 8.0 41 768-808 778-818 (821)
143 KOG3836 HLH transcription fact 94.3 0.019 4.2E-07 67.3 1.8 61 366-441 244-305 (605)
144 cd01178 IPT_NFAT IPT domain of 94.3 0.13 2.8E-06 47.3 6.5 82 364-453 1-100 (101)
145 KOG2505 Ankyrin repeat protein 94.2 0.091 2E-06 60.2 6.6 46 566-611 426-471 (591)
146 cd00602 IPT_TF IPT domain of e 94.2 0.17 3.7E-06 46.9 7.3 82 366-453 2-100 (101)
147 smart00015 IQ Short calmodulin 94.0 0.053 1.2E-06 37.2 2.8 20 768-787 4-23 (26)
148 cd01176 IPT_RBP-Jkappa IPT dom 93.0 0.3 6.5E-06 43.6 6.3 66 381-453 20-96 (97)
149 PF08549 SWI-SNF_Ssr4: Fungal 92.3 0.27 5.9E-06 58.7 6.9 102 33-143 30-155 (669)
150 cd01177 IPT_NFkappaB IPT domai 92.0 0.63 1.4E-05 42.9 7.4 82 366-453 2-101 (102)
151 KOG0163 Myosin class VI heavy 85.6 82 0.0018 38.8 20.2 50 719-768 778-833 (1259)
152 PF06128 Shigella_OspC: Shigel 77.1 6.8 0.00015 41.3 6.8 95 570-668 179-280 (284)
153 PF06128 Shigella_OspC: Shigel 76.1 4.6 9.9E-05 42.5 5.3 49 581-629 228-280 (284)
154 KOG0163 Myosin class VI heavy 68.3 3.1E+02 0.0067 34.2 21.9 22 714-735 813-834 (1259)
155 KOG0162 Myosin class I heavy c 65.9 18 0.00039 44.0 7.7 43 768-813 697-739 (1106)
156 KOG0161 Myosin class II heavy 65.6 70 0.0015 44.1 13.9 35 792-826 775-812 (1930)
157 KOG0942 E3 ubiquitin protein l 63.0 12 0.00025 46.7 5.6 31 867-897 24-54 (1001)
158 KOG3610 Plexins (functional se 62.2 9.4 0.0002 48.8 4.9 77 362-438 47-126 (1025)
159 KOG4427 E3 ubiquitin protein l 59.4 24 0.00052 43.1 7.2 35 763-803 26-60 (1096)
160 KOG0161 Myosin class II heavy 58.1 1.4E+02 0.003 41.4 14.7 40 769-808 775-817 (1930)
161 KOG0942 E3 ubiquitin protein l 57.7 19 0.00041 44.9 6.2 29 763-791 25-53 (1001)
162 KOG4427 E3 ubiquitin protein l 56.1 29 0.00063 42.5 7.1 35 744-780 26-60 (1096)
163 KOG0377 Protein serine/threoni 51.2 25 0.00055 40.4 5.4 21 767-787 17-37 (631)
164 PF03158 DUF249: Multigene fam 47.5 29 0.00063 35.7 4.7 46 606-663 146-191 (192)
165 KOG0377 Protein serine/threoni 46.9 19 0.00042 41.3 3.7 24 711-734 14-37 (631)
166 PF11929 DUF3447: Domain of un 42.2 38 0.00082 29.5 4.1 47 605-664 8-54 (76)
167 PF14545 DBB: Dof, BCAP, and B 36.9 1.2E+02 0.0025 30.2 6.9 67 370-442 3-78 (142)
168 PF11929 DUF3447: Domain of un 35.8 59 0.0013 28.2 4.3 48 571-625 7-54 (76)
169 PF09099 Qn_am_d_aIII: Quinohe 35.5 91 0.002 27.9 5.4 64 366-438 3-71 (81)
170 PF03106 WRKY: WRKY DNA -bindi 35.2 16 0.00035 30.6 0.6 9 76-84 2-10 (60)
171 KOG0162 Myosin class I heavy c 33.0 70 0.0015 39.3 5.5 30 872-901 696-725 (1106)
172 PF08763 Ca_chan_IQ: Voltage g 29.2 67 0.0014 24.0 2.9 19 768-786 10-28 (35)
173 COG5261 IQG1 Protein involved 28.9 5.3E+02 0.012 32.7 11.9 17 881-897 472-488 (1054)
174 smart00774 WRKY DNA binding do 28.8 21 0.00046 29.8 0.3 9 76-84 2-10 (59)
175 PF03158 DUF249: Multigene fam 26.6 95 0.0021 32.1 4.5 24 646-669 147-170 (192)
176 COG4674 Uncharacterized ABC-ty 26.0 70 0.0015 33.6 3.5 45 398-442 8-55 (249)
177 KOG3836 HLH transcription fact 24.8 19 0.00041 43.2 -0.9 62 543-606 403-465 (605)
178 KOG4229 Myosin VII, myosin IXB 24.4 58 0.0013 42.3 3.1 82 717-811 922-1010(1062)
179 KOG1709 Guanidinoacetate methy 23.2 65 0.0014 34.2 2.7 48 622-675 1-48 (271)
180 TIGR03437 Soli_cterm Solibacte 22.4 2.6E+02 0.0057 29.7 7.1 63 379-441 4-75 (215)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=1.4e-132 Score=1170.57 Aligned_cols=880 Identities=41% Similarity=0.637 Sum_probs=653.1
Q ss_pred CccccccccccCCCCCchhhHHHHHHHHHHhcCChhHHHHHHhcCccceeccCCCCCCCCccEEeeehhhhhhccccCcc
Q 002479 1 MAELLVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHN 80 (917)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~dg~~ 80 (917)
+++++..++++.|.+...||+..+++++++|||+|+||++||+||++|.|+++||+||.|||+||||||+|||||||||+
T Consensus 5 ~~n~~~is~~l~~~sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~ 84 (975)
T KOG0520|consen 5 SSNRHIISIILPFKSLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHN 84 (975)
T ss_pred cccccccceeechhhhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchh
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeccCCCchhhhhhhcccCCEeeEEEEeeccCCCCccceeeeeccCCCCCceEEEeecccCCCCCCC--------CCCC
Q 002479 81 WKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPAT--------PPNS 152 (917)
Q Consensus 81 w~~~~~~~~~~e~~~~lk~~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~~g~~~~--------~~~~ 152 (917)
|||||||||||||||||||||+|+||||||||++|||||||||||||+.++||||||||||++.+... ++.+
T Consensus 85 WkKkkDGKtirEaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~s~~s 164 (975)
T KOG0520|consen 85 WKKKKDGKTIREAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFSSIIS 164 (975)
T ss_pred hhhcCCCCcChHHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999843221 1111
Q ss_pred CCC-C---CCCCCCCcc-----cccccCCCCCCcCCCCCccccCCCCCccccccccccccccccc-cccccccCCCCCCC
Q 002479 153 HSS-S---ISDQSAPLL-----LSEEFNSGAGHAYSAGGKELQAPNESLTVQNHEMRLHELNTLE-WDDLVVTNDSNDST 222 (917)
Q Consensus 153 ~~~-~---~~~~~~~~~-----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 222 (917)
... + ...++++++ ..+++++..+.+ .+....+..+ ...+|...+++.++.+ |..++.+.++....
T Consensus 165 d~~~S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~----~~~~~g~~~~-~s~~h~i~~~~~~s~~~~~~~p~s~~s~~~~ 239 (975)
T KOG0520|consen 165 DKAWSLNQLAGQLSPIFHNHSSVNEDVAEINSNQ----TGNALGSVFG-NSRNHRIRLHEVNSLDPLYKLPVSDDSLNLS 239 (975)
T ss_pred cccccHHHhhcccCcchhcccchHHHHHHHhhhc----cccccccccC-cchhhhhcccccCCccccccccccCCccccc
Confidence 110 0 111222211 122222222110 0000001111 1235666777777665 77777654432222
Q ss_pred CCCCCCCccccccccccccCCCCCCCCCCCCCCcc-cccCCCCc-CCCCCCccCCCc--------ccccCCccccccccc
Q 002479 223 EPRGDKFSHFDQQNHTAIKGAASNGSFFPSHDSYA-EVSSGGCL-TSLSQPIDRSNN--------TQFNNLDGVYSELMG 292 (917)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 292 (917)
.+....+ .+.....-..+.++........... +....++. ....+.+.+..+ +....++...+...+
T Consensus 240 ~~~~~~~---~~~~~~~~~rs~~~s~~te~l~n~~~~~~~~g~s~s~~l~~i~~~~~~~~~~~~~p~~~nf~~~ss~~s~ 316 (975)
T KOG0520|consen 240 APKPIDL---PKGPTSVKQRSSSPSYFTEILGNAPSGLVSQGNSLSSSLQRISSFTGLDNAAYEQPNSQNFEPNSSLNSH 316 (975)
T ss_pred cCCCccc---ccCCcchhhcCCCCcchhhhcccCCCcccccccccccchhhcccccccccccccCCccccccccccCCCC
Confidence 2211110 0000000000000000000000000 00000000 000111100000 000000001111111
Q ss_pred ccccc--cccccccCcccCCC-c----cc-ccccCCCCCCCchhhhhhhhhCCCCCC-------CC----CCCCCCCCCC
Q 002479 293 TQSSV--SSQRNEFGEVCTGD-S----LD-ILAGDGLQSQDSFGKWMNYIMTDSPGS-------VD----DPVLEPSISS 353 (917)
Q Consensus 293 ~~~~~--~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~sf~~~~~~~~~~~~~~-------~~----~~~~~~~~~~ 353 (917)
..... ...+.++.+....+ . .+ .+.++|+++.|+|++||+.....++.. .- +++.++++
T Consensus 317 ~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~~~~p~~~~~~~~~s-- 394 (975)
T KOG0520|consen 317 VTGQSYGQGLQARSPSATSESRPITSAADAALSELGLKSGDSFSRWASTFGEISDLGQDPSGEAVWTPENDPMGPPGS-- 394 (975)
T ss_pred ccccccCccccCCCcccccccCCcchhhccccccccccccccccchhhhhcccccCCCCCccccccccCCCcCCCccc--
Confidence 00000 00111112211111 1 22 356889999999999999744322211 11 11122222
Q ss_pred CCCCCCCCCccceeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCCCCceEE
Q 002479 354 GHHQFTVPEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFL 433 (917)
Q Consensus 354 ~~~~s~~~~~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~ 433 (917)
..+|| +++|+|+|+||||+|+|++||+||+|+|++. +....+|+||||+++|||++|++||||||||||.||.|+
T Consensus 395 ~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~ 469 (975)
T KOG0520|consen 395 FLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVN 469 (975)
T ss_pred ccCCC-CCcceeeeeccCcccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEE
Confidence 34555 4499999999999999999999999999633 235889999999999999999999999999999999999
Q ss_pred EEEEeC-CCCccccccccccCCCc--ccccCCCcccccchhHHHHHHHHHHHhhccccccccccCCCCCCchHHHhh--h
Q 002479 434 LYMSLD-GHKPISQVLNFEYRSPQ--LHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKK--F 508 (917)
Q Consensus 434 l~v~~~-n~~~~se~~~Feyr~~~--~~~~~~~~~d~~~~~e~~l~~Rl~~ll~~~~~~l~il~~~~~~~~l~e~~~--~ 508 (917)
|||+|+ ++..||++++|+|...+ .+++.. -++...++.++.||..|+.... +++..+..+....+... +
T Consensus 470 l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s---~~d~~~~~sl~~rl~~~~~r~~---~~~~s~~~~~n~~~~~~~~l 543 (975)
T KOG0520|consen 470 LQVTCRISGLACSEVREFAYLVQPSQQIDKLS---WEDFLFQMSLLHRLETMLNRKQ---SILSSKPSTENTSDAESGNL 543 (975)
T ss_pred EEEEecccceeeeeehheeecccCcccccccc---cccchhhhHHHHHHHHHHHHhH---hHhhccCCccccccccchhH
Confidence 999998 89999999999998732 333332 1223456667777777765333 34455666666666666 8
Q ss_pred hhchhccCCCHHH-HHHHhcCCCCCCCccccHHHHHHHcCCcHHHHHHHHHc--CCCCCcccCCCChhHHHHHHcCCHHH
Q 002479 509 ASKSTCISNSWAY-LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWA 585 (917)
Q Consensus 509 ~~~i~~~~~~~~~-l~~~l~~~~~s~~~~~t~L~~aa~~~~l~~~lv~~Ll~--gadvn~~d~~G~T~LHlAa~~G~~~~ 585 (917)
+.+++...+.|.+ ++.....+.....+.++.++...++..+..||++.+++ |...+..|.+|+..+|++|..|+.|.
T Consensus 544 ~skv~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA 623 (975)
T KOG0520|consen 544 ASKVVHLLNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWA 623 (975)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCcee
Confidence 8899988899999 88888888877778888888888888889999999999 55666799999999999999999999
Q ss_pred HHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 586 v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
+.+++..|..++++|.+||||||||+.+|+..++..|++.|++.+++|||++.++.|.|+.++|..+|+.++..+|.+..
T Consensus 624 ~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~ 703 (975)
T KOG0520|consen 624 FLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKA 703 (975)
T ss_pred EEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccc-ccchhhhccccccc-ccC--CccchhhHHHhhHHHHhhhHHHHHHHHHHHhhhhhhhhhHH-hhcCC
Q 002479 666 LVAQFNDMTLAG-NISGSLQTGSTITV-DTQ--NLTEDEVYLKDTLSAYRTAAEAAARIQAAFREHSLKVQTKA-IRFSS 740 (917)
Q Consensus 666 a~~~l~~~~l~~-~i~~~~~~~~~~~~-~~~--~~~~~q~slk~sL~a~r~~~~Aa~~IQ~~~R~~~~Rkr~~~-~~~~~ 740 (917)
+..++.++.+.+ ++++......+... .+. +..++..+|+++|.++|++.+||.+||++||...+++...+ +..+.
T Consensus 704 L~~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~ 783 (975)
T KOG0520|consen 704 LSAHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDAT 783 (975)
T ss_pred HHHHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhc
Confidence 999999999988 55444433333322 211 23455567999999999999999999999999999965544 33333
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 741 PEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLE 820 (917)
Q Consensus 741 ~~~~~~~~~Aa~~IQ~~~R~~~~rr~~~aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ 820 (917)
..+........+.++..++.+..|....++..||.+||+|+.|+.|+.+|+.+++||+++||++.|+.|+++.|++.++.
T Consensus 784 ~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~le 863 (975)
T KOG0520|consen 784 KEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLE 863 (975)
T ss_pred chhhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHH
Confidence 44666777788999999987777777889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhccCCCCC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 002479 821 KAILRWRLKRKGFRGLQVDRVEVEAVSDPNH---EGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLA 897 (917)
Q Consensus 821 ~~iR~~r~~r~~lr~~r~~~~~~~~~~~q~~---~~~~~~~~~r~~R~q~~~~~~~A~~~IQs~~R~~~aR~qy~rlk~~ 897 (917)
+.+.+||++++++|+|+.++... .|.. ..++++++||..|++.++++.+|+++||+|+|++++|+||||++..
T Consensus 864 k~~lrwR~k~~g~Rgfk~~~~~e----~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR~~~~ 939 (975)
T KOG0520|consen 864 KLILRWRRKGKGFRGFKGRALFE----EQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRRLLLV 939 (975)
T ss_pred HHHHHHHHhhhhhcccccccchh----ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999887532 1111 1268999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002479 898 HDQAKLEY 905 (917)
Q Consensus 898 ~~~~k~e~ 905 (917)
+++.+.++
T Consensus 940 ~~~~~~~~ 947 (975)
T KOG0520|consen 940 YEQYQESY 947 (975)
T ss_pred HHHHHhhh
Confidence 99988865
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=1.2e-62 Score=447.97 Aligned_cols=117 Identities=62% Similarity=1.077 Sum_probs=114.5
Q ss_pred HHHHHHhcCChhHHHHHHhcCccceeccCCCCCCCCccEEeeehhhhhhccccCccceeccCCCchhhhhhhcccCCEee
Q 002479 25 MEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEER 104 (917)
Q Consensus 25 ~~~~~~~w~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~dg~~w~~~~~~~~~~e~~~~lk~~~~~~ 104 (917)
++| ++|||+|+||++||+||++|.+..+||++|+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 445 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCCCccceeeeeccCCCCCceEEEeecccC
Q 002479 105 IHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETH 142 (917)
Q Consensus 105 ~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~ 142 (917)
|||||||||+|||||||||||||++|+||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=1.6e-21 Score=190.29 Aligned_cols=131 Identities=23% Similarity=0.250 Sum_probs=91.6
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc--CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~--gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
.+.+|||.||..|+.. +++-|+. |+|+|..+..|+|+|||||..|..+++.+|+++|+.|+.+|..|.||||-|+.
T Consensus 71 aGWtPlhia~s~g~~e--vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAa 148 (226)
T KOG4412|consen 71 AGWTPLHIAASNGNDE--VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAA 148 (226)
T ss_pred cCCchhhhhhhcCcHH--HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHh
Confidence 3567777777777554 4554444 67777777777777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 613 ~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
-|..+++++|+..||.+|. +|..|+||||.|...|+.+++.+|+++|++..+.+.
T Consensus 149 vGklkvie~Li~~~a~~n~------qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edk 203 (226)
T KOG4412|consen 149 VGKLKVIEYLISQGAPLNT------QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDK 203 (226)
T ss_pred ccchhhHHHHHhcCCCCCc------ccccCccHHHHHHhccCchHHHHHHHhccceeeccc
Confidence 7777777777777777766 677777777777666777777777777766555443
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.1e-20 Score=184.38 Aligned_cols=137 Identities=18% Similarity=0.156 Sum_probs=127.2
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc--CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWA 610 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~--gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~-Gadin~~D~~G~TpLH~A 610 (917)
.++++|||+||..|+.. ++.+|++ +..+|.+|..|+||||.||..|+.++|+.|+.+ |+|+|..+..|.|+||||
T Consensus 36 qD~Rt~LHwa~S~g~~e--iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyA 113 (226)
T KOG4412|consen 36 QDGRTPLHWACSFGHVE--IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYA 113 (226)
T ss_pred ccCCceeeeeeecCchh--HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhh
Confidence 36899999999999987 7888885 888999999999999999999999999999988 999999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccccccc
Q 002479 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 678 (917)
Q Consensus 611 a~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~ 678 (917)
+..|+.+|+++|+++||.+++ +|..|.||||-|+.-|..+++++|+..|+..+..+.....+
T Consensus 114 agK~r~eIaqlLle~ga~i~~------kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~Tp 175 (226)
T KOG4412|consen 114 AGKGRLEIAQLLLEKGALIRI------KDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTP 175 (226)
T ss_pred hcCChhhHHHHHHhcCCCCcc------cccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccH
Confidence 999999999999999999998 99999999999999999999999999998887776655443
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.77 E-value=5.3e-18 Score=185.30 Aligned_cols=130 Identities=13% Similarity=0.040 Sum_probs=101.7
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCC-hhHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQ-GVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWA 610 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~-T~LHlAa~~G~~~~v~~LL~~Gadin~~D-~~G~TpLH~A 610 (917)
..+.||||.|+..++.. +++.|+. |++++..+..|. ||||+|+..|+.++|++|+.+|.+. .| ..|.||||+|
T Consensus 92 ~~G~TpLh~Aa~~g~~e--ivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~A 167 (284)
T PHA02791 92 DKGNTALYYAVDSGNMQ--TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHIT 167 (284)
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHH
Confidence 44678888888888776 6677766 888888777774 7888888888888888888876543 23 2478888888
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcH-HHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA-ADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 611 a~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~Tp-L~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
+..|+.++|++|+++||+++. +|..|.|| ||+|+..|+.+++++|+++|++.+..+.
T Consensus 168 a~~g~~eiv~lLL~~gAd~n~------~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 168 IKNGHVDMMILLLDYMTSTNT------NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL 225 (284)
T ss_pred HHcCCHHHHHHHHHCCCCCCc------ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence 888888888888888888877 67778876 8888888888888888888888766655
No 6
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.76 E-value=2.7e-18 Score=196.03 Aligned_cols=131 Identities=25% Similarity=0.317 Sum_probs=114.9
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCccc-CCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d-~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
.++.+.||+||+++++. ++++|++ |+++|..+ .-|.|||||||++|+..+|.+|+++|||++.+|.+|.||||+|+
T Consensus 76 ~~g~tlLHWAAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~ 153 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAA 153 (600)
T ss_pred cCCccceeHHHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHH
Confidence 36778999999999988 7888888 99999877 67889999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccc
Q 002479 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 672 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~ 672 (917)
..|+.-+|.+||.+|++++. +|.+|+|||++|+..|+...+..|++-|+.....+
T Consensus 154 ~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 154 QFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred HhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 99999999999999988887 88999999999999998888888888887665554
No 7
>PHA02791 ankyrin-like protein; Provisional
Probab=99.76 E-value=6e-18 Score=184.90 Aligned_cols=130 Identities=18% Similarity=0.215 Sum_probs=116.9
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-cHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWAA 611 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~-TpLH~Aa 611 (917)
.++.+|||.|+..++.. +++.|+. |++++..|..|.||||+||..|+.+++++|+.+|+++|.++..|+ ||||+|+
T Consensus 59 ~d~~TpLh~Aa~~g~~e--iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa 136 (284)
T PHA02791 59 LENEFPLHQAATLEDTK--IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAV 136 (284)
T ss_pred CCCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHH
Confidence 35689999999999876 6777777 999999999999999999999999999999999999999999986 8999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 612 YYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n~~tdp~~~d-~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
..|+.++|++|+++|++. .| ..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 137 ~~g~~eivk~LL~~~~~~--------~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~ 191 (284)
T PHA02791 137 MLNDVSIVSYFLSEIPST--------FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS 191 (284)
T ss_pred HcCCHHHHHHHHhcCCcc--------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 999999999999987643 12 3589999999999999999999999998877654
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.76 E-value=5.2e-18 Score=171.55 Aligned_cols=134 Identities=22% Similarity=0.181 Sum_probs=117.2
Q ss_pred ccccHHHHHHHcCCcHH--HHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHH---HHHHHHcCCCCcccC-CCCCcHH
Q 002479 535 EAKDSFFELTLKSKLKE--WLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWA---ILLFSWSGLSLDFRD-KYGWTAL 607 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~--~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~---v~~LL~~Gadin~~D-~~G~TpL 607 (917)
++.+.||.||..+++.. .+++.|.. |++++..|..|+||||+||..|..++ +++|+..|+++|.+| ..|.|||
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 46689999999999753 13445555 88999999999999999999988654 789999999999998 5899999
Q ss_pred HHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccc
Q 002479 608 HWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 674 (917)
Q Consensus 608 H~Aa~~G~~eiv~~LL~-~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~ 674 (917)
|+|+..|+.+++++|+. .|++++. +|..|.||||+|+..++.+++++|+.+|++.+-.+..
T Consensus 99 h~A~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 99 HIAASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred HHHHHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence 99999999999999995 8999988 8899999999999999999999999999887655443
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.3e-17 Score=192.55 Aligned_cols=130 Identities=19% Similarity=0.203 Sum_probs=118.0
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
.++.+|||.|+..++.. +++.|++ |++++..+..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 100 ~~g~tpL~~A~~~~~~~--iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~ 177 (413)
T PHA02875 100 KDGMTPLHLATILKKLD--IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177 (413)
T ss_pred CCCCCHHHHHHHhCCHH--HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 35789999999999876 7788877 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCC-CcHHHHHHHcCcHHHHHHHHHhccccccc
Q 002479 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKKGFDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 613 ~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G-~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~ 671 (917)
.|+.+++++|+++|++++. .+..| .||+|+|+..|+.+++++|+++|++.++.
T Consensus 178 ~g~~eiv~~Ll~~ga~~n~------~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 178 KGDIAICKMLLDSGANIDY------FGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred cCCHHHHHHHHhCCCCCCc------CCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 9999999999999999988 55565 58899999999999999999999988654
No 10
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.74 E-value=3.7e-17 Score=171.60 Aligned_cols=133 Identities=14% Similarity=0.076 Sum_probs=115.6
Q ss_pred CccccHHHHHHHcC--CcHHHHHHHHHc-CCCCCccc-CCCChhHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcH
Q 002479 534 PEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTA 606 (917)
Q Consensus 534 ~~~~t~L~~aa~~~--~l~~~lv~~Ll~-gadvn~~d-~~G~T~LHlAa~~---G~~~~v~~LL~~Gadin~~D~~G~Tp 606 (917)
..+.||||.|+..+ +.. ++++|++ |+++|.++ ..|.||||+|+.. ++.+++++|+++|+++|.+|..|.||
T Consensus 49 ~~g~TpLh~a~~~~~~~~e--iv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~Tp 126 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVE--ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126 (209)
T ss_pred ccCCCHHHHHHHcCCCCHH--HHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 45789999998865 333 7788887 99999987 5899999998764 47999999999999999999999999
Q ss_pred HHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHH-HHHcCcHHHHHHHHHhcccccccccc
Q 002479 607 LHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI-ASKKGFDGLAAFLSEQALVAQFNDMT 674 (917)
Q Consensus 607 LH~Aa~--~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~l-A~~~g~~~iv~~Ll~~Ga~~~l~~~~ 674 (917)
||+|+. .++.+++++|+++|++++. +|..|.||||. |+..++.+++++|+++|++.+..+..
T Consensus 127 Lh~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~ 191 (209)
T PHA02859 127 LHMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKS 191 (209)
T ss_pred HHHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC
Confidence 999986 4689999999999999998 88999999996 56688999999999999988765543
No 11
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.73 E-value=8.6e-18 Score=191.88 Aligned_cols=137 Identities=23% Similarity=0.260 Sum_probs=124.2
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
.-+.+|||+||.+|++. ++.+|++ |||++.+|.+|.||||+||..|+.-+|-+||.+|+++|.+|.+|+||||||+.
T Consensus 110 ~l~stPLHWAar~G~~~--vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAay 187 (600)
T KOG0509|consen 110 VLGSTPLHWAARNGHIS--VVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAY 187 (600)
T ss_pred CCCCCcchHHHHcCcHH--HHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHH
Confidence 34669999999999998 7888888 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccccccc
Q 002479 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 677 (917)
Q Consensus 613 ~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~ 677 (917)
.|+...+..||..|+.++.. .|..|.||||+|+..|+..++.+|++.|++....+.+.++
T Consensus 188 kg~~~~v~~LL~f~a~~~~~-----d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~t 247 (600)
T KOG0509|consen 188 KGFALFVRRLLKFGASLLLT-----DDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKT 247 (600)
T ss_pred hcccHHHHHHHHhccccccc-----ccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCC
Confidence 99999999999999999983 3489999999999999999999888888777666666444
No 12
>PHA02741 hypothetical protein; Provisional
Probab=99.73 E-value=3.5e-17 Score=165.94 Aligned_cols=127 Identities=20% Similarity=0.148 Sum_probs=114.1
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHH------c-CCCCCcccCCCChhHHHHHHcCC----HHHHHHHHHcCCCCcccCC-
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVV------E-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDK- 601 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll------~-gadvn~~d~~G~T~LHlAa~~G~----~~~v~~LL~~Gadin~~D~- 601 (917)
..+.++||.|+..|+.. +++.|+ . |++++.+|..|.||||+|+..|+ .+++++|+..|+++|.+|.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~--~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 19 SEGENFFHEAARCGCFD--IIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cCCCCHHHHHHHcCCHH--HHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 35789999999999987 555542 2 68899999999999999999999 5889999999999999995
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccc
Q 002479 602 YGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (917)
Q Consensus 602 ~G~TpLH~Aa~~G~~eiv~~LL~-~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~ 668 (917)
.|+||||+|+..++.+++++|+. .|++++. .|..|.||||+|+..|+.+++++|++.++..
T Consensus 97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 89999999999999999999997 5999887 8899999999999999999999999998663
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.72 E-value=5.9e-17 Score=187.14 Aligned_cols=132 Identities=18% Similarity=0.234 Sum_probs=120.4
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCC-cccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTT-EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn-~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
.++.+|||.|+..|+.. +++.|+. |++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 66 ~~~~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~ 143 (413)
T PHA02875 66 PDIESELHDAVEEGDVK--AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAV 143 (413)
T ss_pred CCcccHHHHHHHCCCHH--HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Confidence 45679999999999987 5677776 77664 46778999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 144 ~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~ 199 (413)
T PHA02875 144 MMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGK 199 (413)
T ss_pred HcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCC
Confidence 99999999999999999988 889999999999999999999999999998876543
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.71 E-value=2.4e-17 Score=164.34 Aligned_cols=130 Identities=16% Similarity=0.193 Sum_probs=108.9
Q ss_pred CccccHHHHHHHcCCcHHHHHHH-HHcC---CCCCcccCCCChhHHHHHHcCCHH---HHHHHHHcCCCCcccC-CCCCc
Q 002479 534 PEAKDSFFELTLKSKLKEWLLER-VVEG---SKTTEYDVHGQGVIHLCAMLGYTW---AILLFSWSGLSLDFRD-KYGWT 605 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~-Ll~g---advn~~d~~G~T~LHlAa~~G~~~---~v~~LL~~Gadin~~D-~~G~T 605 (917)
.++.||||.|+..|+..+.+... .... ..++..|..|.||||+||..|..+ ++++|+..|+++|.+| ..|+|
T Consensus 15 ~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T 94 (154)
T PHA02736 15 IEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNT 94 (154)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCc
Confidence 35789999999999855422211 1111 123347889999999999999864 6889999999999998 48999
Q ss_pred HHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccc
Q 002479 606 ALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (917)
Q Consensus 606 pLH~Aa~~G~~eiv~~LL~-~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~ 669 (917)
|||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+.+|++.+
T Consensus 95 ~Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 95 PLHIAVYTQNYELATWLCNQPGVNMEI------LNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCcc------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999998 5999988 88999999999999999999999999998764
No 15
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.1e-16 Score=186.09 Aligned_cols=143 Identities=20% Similarity=0.122 Sum_probs=113.0
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
...+.+|||.|+..++.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|+++|..|..|+||||+|+
T Consensus 121 ~~~g~T~Lh~A~~~~~~~--~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~ 198 (434)
T PHA02874 121 DAELKTFLHYAIKKGDLE--SIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAA 198 (434)
T ss_pred CCCCccHHHHHHHCCCHH--HHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 345778999999888876 6677776 8999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCC-------------------------CCCCCCCCCCCcHHHHHHHcC-cHHHHHHHHHhc
Q 002479 612 YYGREKMVVDLLSAGAKPNLV-------------------------TDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQA 665 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n~~-------------------------tdp~~~d~~G~TpL~lA~~~g-~~~iv~~Ll~~G 665 (917)
..|+.+++++|++.|++++.. .+++.+|..|.||||+|+..+ +.+++++|+.+|
T Consensus 199 ~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~g 278 (434)
T PHA02874 199 EYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHK 278 (434)
T ss_pred HcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCc
Confidence 999999999999999887652 134456667777777777654 567777777777
Q ss_pred cccccccccccc
Q 002479 666 LVAQFNDMTLAG 677 (917)
Q Consensus 666 a~~~l~~~~l~~ 677 (917)
++.+..+.....
T Consensus 279 ad~n~~d~~g~T 290 (434)
T PHA02874 279 ADISIKDNKGEN 290 (434)
T ss_pred CCCCCCCCCCCC
Confidence 766655544433
No 16
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.71 E-value=7.8e-17 Score=189.76 Aligned_cols=134 Identities=19% Similarity=0.130 Sum_probs=121.5
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc-
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY- 613 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~- 613 (917)
+.+|||.|+..++.. ++++|+. |++++..|..|.||||+|+..|+.+++++|+..|+++|.+|..|+||||+|+..
T Consensus 168 g~tpLh~A~~~~~~~--iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~ 245 (477)
T PHA02878 168 GNTALHYATENKDQR--LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYC 245 (477)
T ss_pred CCCHHHHHHhCCCHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhc
Confidence 889999999999877 7787877 999999999999999999999999999999999999999999999999999975
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHHhccccccccccccccc
Q 002479 614 GREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 614 G~~eiv~~LL~~GAd~n~~tdp~~~d~-~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
++.+++++|+++|++++. ++. .|.||||+| .++.+++++|+++|++.+..+.....++
T Consensus 246 ~~~~iv~~Ll~~gadvn~------~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL 304 (477)
T PHA02878 246 KDYDILKLLLEHGVDVNA------KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPL 304 (477)
T ss_pred CCHHHHHHHHHcCCCCCc------cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 799999999999999998 554 799999999 5788999999999999887766555444
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=99.71 E-value=2.6e-17 Score=193.05 Aligned_cols=249 Identities=16% Similarity=0.168 Sum_probs=168.8
Q ss_pred cceEEEeC---CcccceeecccCeeEEeCCCCCCceEEEEEEeCCCCccccccccccCCCcccccCCCcccccchhHHHH
Q 002479 399 SNMFCVCG---EVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQV 475 (917)
Q Consensus 399 ~~~~c~FG---~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~~se~~~Feyr~~~~~~~~~~~~d~~~~~e~~l 475 (917)
..+.|.+| ..++...++..|.-.-.. ...|..||+.++.++. ..+++.+-.... ......+..+.++++.
T Consensus 51 Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~--~~~g~TpLh~A~~~~~-~~~iv~lLl~~g----a~in~~~~~g~tpLh~ 123 (471)
T PHA03095 51 LHLYLHYSSEKVKDIVRLLLEAGADVNAP--ERCGFTPLHLYLYNAT-TLDVIKLLIKAG----ADVNAKDKVGRTPLHV 123 (471)
T ss_pred HHHHHHhcCCChHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCC-cHHHHHHHHHcC----CCCCCCCCCCCCHHHH
Confidence 34667777 777888888888632111 1478899988886662 122222221111 1112234456788887
Q ss_pred HH-------HHHHHhhccccccccccCCCCCCchHHHhhhhhchh-ccCCCHHHHHHHhcCCC----CCCCccccHHHHH
Q 002479 476 QM-------RLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKST-CISNSWAYLFKSVGDKR----TSLPEAKDSFFEL 543 (917)
Q Consensus 476 ~~-------Rl~~ll~~~~~~l~il~~~~~~~~l~e~~~~~~~i~-~~~~~~~~l~~~l~~~~----~s~~~~~t~L~~a 543 (917)
.. .++++|... +.+++..+.......... ........+++.+.+.+ .....+.++||.+
T Consensus 124 a~~~~~~~~~iv~~Ll~~---------gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~ 194 (471)
T PHA03095 124 YLSGFNINPKVIRLLLRK---------GADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHH 194 (471)
T ss_pred HhhCCcCCHHHHHHHHHc---------CCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 66 244444322 233332211111111100 01122233344332222 2234578999999
Q ss_pred HHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCH--HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHH
Q 002479 544 TLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYT--WAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVV 620 (917)
Q Consensus 544 a~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~--~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~ 620 (917)
+.......-+++.|+. |++++..|..|.||||+||..|+. .++..|+..|+++|.+|..|+||||+|+..|+.++++
T Consensus 195 ~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~ 274 (471)
T PHA03095 195 LQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACR 274 (471)
T ss_pred HHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 8765443336777777 999999999999999999999975 5788999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccc
Q 002479 621 DLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (917)
Q Consensus 621 ~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~ 669 (917)
+|+++||+++. +|..|.||||+|+..|+.+++++|++++++..
T Consensus 275 ~LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 275 RLIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317 (471)
T ss_pred HHHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence 99999999998 88999999999999999999999999997764
No 18
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.70 E-value=9.9e-17 Score=188.70 Aligned_cols=127 Identities=21% Similarity=0.320 Sum_probs=98.3
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCC------ChhHHHHHHcCC--HHHHHHHHHcCCCCcccCCCCCc
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG------QGVIHLCAMLGY--TWAILLFSWSGLSLDFRDKYGWT 605 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G------~T~LHlAa~~G~--~~~v~~LL~~Gadin~~D~~G~T 605 (917)
.+.+|||.|+..++.. +++.|++ |++++..+..| .||||+|+..|+ .+++++|++.|+++|.+|..|.|
T Consensus 175 ~g~tpL~~A~~~~~~~--iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~T 252 (480)
T PHA03100 175 YGYTPLHIAVEKGNID--VIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFT 252 (480)
T ss_pred CCCCHHHHHHHhCCHH--HHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCC
Confidence 4667888888777655 6666666 77777777777 778888888887 78888888888888888888888
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccc
Q 002479 606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (917)
Q Consensus 606 pLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~ 669 (917)
|||+|+..|+.+++++|+++||+++. +|..|.||+++|+..++.+++++|+++|++.+
T Consensus 253 pL~~A~~~~~~~iv~~Ll~~gad~n~------~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 253 PLHYAVYNNNPEFVKYLLDLGANPNL------VNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 88888888888888888888887776 67778888888888888888888888876543
No 19
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.70 E-value=5.4e-16 Score=193.77 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=99.8
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 614 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G 614 (917)
...+|+.||..|+.. +++.|++ |+++|..|..|.||||+||..|+.+++++|+.+|+++|.+|.+|+||||+|+..|
T Consensus 525 ~~~~L~~Aa~~g~~~--~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g 602 (823)
T PLN03192 525 MASNLLTVASTGNAA--LLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAK 602 (823)
T ss_pred chhHHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhC
Confidence 346677777777655 4555555 7777777777777777777777777777777777777777777777777555554
Q ss_pred -------------------------------CHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 002479 615 -------------------------------REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (917)
Q Consensus 615 -------------------------------~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~ 663 (917)
+.+++++|+++|+++|. +|.+|.||||+|+..|+.+++++|++
T Consensus 603 ~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 603 HHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDS------EDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred CHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 45556666777777776 89999999999999999999999999
Q ss_pred hcccccccccc
Q 002479 664 QALVAQFNDMT 674 (917)
Q Consensus 664 ~Ga~~~l~~~~ 674 (917)
+|++.+..+..
T Consensus 677 ~GAdv~~~~~~ 687 (823)
T PLN03192 677 NGADVDKANTD 687 (823)
T ss_pred cCCCCCCCCCC
Confidence 99988766543
No 20
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.2e-16 Score=185.89 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=106.4
Q ss_pred HHHHHHc-CCCCCcccCC-CChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 002479 553 LLERVVE-GSKTTEYDVH-GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 630 (917)
Q Consensus 553 lv~~Ll~-gadvn~~d~~-G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n 630 (917)
+++.|++ |+++|..|.. |.||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5566666 9999999988 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHc-CcHHHHHHHHHhcccccccc
Q 002479 631 LVTDPTSQNPGGLNAADIASKK-GFDGLAAFLSEQALVAQFND 672 (917)
Q Consensus 631 ~~tdp~~~d~~G~TpL~lA~~~-g~~~iv~~Ll~~Ga~~~l~~ 672 (917)
. +|..|.||||+|+.. ++.+++++|+++|++.+..+
T Consensus 229 ~------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~ 265 (477)
T PHA02878 229 A------RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS 265 (477)
T ss_pred C------CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence 8 889999999999976 78999999999999887654
No 21
>PHA02798 ankyrin-like protein; Provisional
Probab=99.69 E-value=1.7e-16 Score=187.53 Aligned_cols=162 Identities=14% Similarity=0.110 Sum_probs=127.9
Q ss_pred HHHHHHhcCCCCC----CCccccHHHHHHHcCCc--HHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCC---HHHHHHH
Q 002479 520 AYLFKSVGDKRTS----LPEAKDSFFELTLKSKL--KEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY---TWAILLF 589 (917)
Q Consensus 520 ~~l~~~l~~~~~s----~~~~~t~L~~aa~~~~l--~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~---~~~v~~L 589 (917)
..+++.+.+.+.+ ...+.||||.|+..+.. .+ ++++|++ |++++..|..|.||||+|+..|+ .+++++|
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~-iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~L 167 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLE-ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH-HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHH
Confidence 4555554333332 34588999999887642 33 6677766 99999999999999999999887 8999999
Q ss_pred HHcCCCCcccC-CCCCcHHHHHHHc----CCHHHHHHHHhcCCCCCCCC-------------------------------
Q 002479 590 SWSGLSLDFRD-KYGWTALHWAAYY----GREKMVVDLLSAGAKPNLVT------------------------------- 633 (917)
Q Consensus 590 L~~Gadin~~D-~~G~TpLH~Aa~~----G~~eiv~~LL~~GAd~n~~t------------------------------- 633 (917)
+++|+++|.++ ..|.||||.++.. ++.+++++|+++|++++...
T Consensus 168 l~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~ 247 (489)
T PHA02798 168 LEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS 247 (489)
T ss_pred HHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh
Confidence 99999999885 4688999988764 47899999999998876521
Q ss_pred --CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccccccccchh
Q 002479 634 --DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGS 682 (917)
Q Consensus 634 --dp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i~~~ 682 (917)
|++.+|..|.||||+|+..|+.+++++|+++|++.+..+.....++.-+
T Consensus 248 ~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A 298 (489)
T PHA02798 248 YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTA 298 (489)
T ss_pred cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHH
Confidence 5667889999999999999999999999999999988776665554433
No 22
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.2e-16 Score=185.73 Aligned_cols=156 Identities=17% Similarity=0.167 Sum_probs=132.6
Q ss_pred CCCHHHHHHHhcCCCCC----CCccccHHHHHHHcC--CcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHH
Q 002479 516 SNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILL 588 (917)
Q Consensus 516 ~~~~~~l~~~l~~~~~s----~~~~~t~L~~aa~~~--~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~ 588 (917)
..+...+++.+.+.+.+ ...+.++||.|+..+ +.. +++.|++ |++++..|..|.||||+|+..|+.+++++
T Consensus 117 ~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~--iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~ 194 (480)
T PHA03100 117 KSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK--ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKF 194 (480)
T ss_pred ccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH--HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHH
Confidence 34445555555443332 345789999999998 555 6777777 99999999999999999999999999999
Q ss_pred HHHcCCCCcccCCCC------CcHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHH
Q 002479 589 FSWSGLSLDFRDKYG------WTALHWAAYYGR--EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAF 660 (917)
Q Consensus 589 LL~~Gadin~~D~~G------~TpLH~Aa~~G~--~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~ 660 (917)
|+++|++++..+..| .||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..|+.+++++
T Consensus 195 Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~------~d~~g~TpL~~A~~~~~~~iv~~ 268 (480)
T PHA03100 195 LLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI------KDVYGFTPLHYAVYNNNPEFVKY 268 (480)
T ss_pred HHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999 999999999999 9999999999999988 88999999999999999999999
Q ss_pred HHHhccccccccccccccc
Q 002479 661 LSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 661 Ll~~Ga~~~l~~~~l~~~i 679 (917)
|+++|++.+..+.....++
T Consensus 269 Ll~~gad~n~~d~~g~tpl 287 (480)
T PHA03100 269 LLDLGANPNLVNKYGDTPL 287 (480)
T ss_pred HHHcCCCCCccCCCCCcHH
Confidence 9999998877665554443
No 23
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.68 E-value=3e-16 Score=189.40 Aligned_cols=140 Identities=14% Similarity=0.051 Sum_probs=120.6
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHH-----------------------------------
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLC----------------------------------- 577 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlA----------------------------------- 577 (917)
..+.||||.|+..++...-++++|++ |+++|.+|..|+||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i 289 (764)
T PHA02716 210 NHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYI 289 (764)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHH
Confidence 45789999999999763227888888 999999999999999975
Q ss_pred --HHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHH--
Q 002479 578 --AMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK-- 651 (917)
Q Consensus 578 --a~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~--~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~-- 651 (917)
|..|+.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|+++|++++. +|..|.||||+|+.
T Consensus 290 ~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~------kD~~G~TPLH~A~~~l 363 (764)
T PHA02716 290 TLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE------PDNIGNTVLHTYLSML 363 (764)
T ss_pred HHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc------CCCCCCCHHHHHHHhh
Confidence 34577899999999999999999999999999875 4689999999999999998 88999999999875
Q ss_pred ------------cCcHHHHHHHHHhccccccccccccccc
Q 002479 652 ------------KGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 652 ------------~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
.++.+++++|+++|++.+..+.....++
T Consensus 364 av~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPL 403 (764)
T PHA02716 364 SVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPL 403 (764)
T ss_pred hhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChH
Confidence 3789999999999999887765555444
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.68 E-value=4.7e-16 Score=180.96 Aligned_cols=108 Identities=18% Similarity=0.129 Sum_probs=100.7
Q ss_pred CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCC
Q 002479 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 639 (917)
Q Consensus 560 gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d 639 (917)
|++++..|..|.||||+|+..|+.++|++|+..|+++|.+|..|.||||+|+..|+.+++++|+++|++++. .|
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~------~~ 187 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV------KD 187 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC------CC
Confidence 677888899999999999999999999999999999999999999999999999999999999999999887 78
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 640 PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 640 ~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
..|.||||+|+..|+.+++++|++.|++....+.
T Consensus 188 ~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~ 221 (434)
T PHA02874 188 NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCK 221 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCC
Confidence 9999999999999999999999999987655443
No 25
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.68 E-value=9.4e-17 Score=176.13 Aligned_cols=121 Identities=21% Similarity=0.254 Sum_probs=112.9
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
....+||-.||..|++. ++++|++ |+|++..|..|.|.||+||..|+.+++++|++.|+|+|.++..|+|+||.|+.
T Consensus 115 ~TNStPLraACfDG~le--ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caE 192 (615)
T KOG0508|consen 115 RTNSTPLRAACFDGHLE--IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAE 192 (615)
T ss_pred ccCCccHHHHHhcchhH--HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhh
Confidence 34558999999999998 7888888 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 002479 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (917)
Q Consensus 613 ~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~ 663 (917)
.|+.+++++|+.+|+.+.. |..|.|||..|+..|+.+++++|+.
T Consensus 193 sG~vdivq~Ll~~ga~i~~-------d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 193 SGSVDIVQLLLKHGAKIDV-------DGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred cccHHHHHHHHhCCceeee-------cCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999999998874 6789999999999999999999996
No 26
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.67 E-value=2.2e-16 Score=193.80 Aligned_cols=250 Identities=17% Similarity=0.217 Sum_probs=178.1
Q ss_pred cceEEEeCCcccceeecccCeeEEeCCCCCCceEEEEEEeCCCCccccccccccCCCcccccCCCcccccchhHHHHHHH
Q 002479 399 SNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQMR 478 (917)
Q Consensus 399 ~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~~se~~~Feyr~~~~~~~~~~~~d~~~~~e~~l~~R 478 (917)
....|.-|.+++.-.+...|..-|..+ .+|..||+++..-..+ .++..-+... .....-+..+.+++++...
T Consensus 378 l~la~~~g~~~~v~Lll~~ga~~~~~g--k~gvTplh~aa~~~~~--~~v~l~l~~g----A~~~~~~~lG~T~lhvaa~ 449 (1143)
T KOG4177|consen 378 LHLAVKSGRVSVVELLLEAGADPNSAG--KNGVTPLHVAAHYGNP--RVVKLLLKRG----ASPNAKAKLGYTPLHVAAK 449 (1143)
T ss_pred hhhhcccCchhHHHhhhhccCCcccCC--CCCcceeeehhhccCc--ceEEEEeccC----CChhhHhhcCCChhhhhhh
Confidence 357788999998888888887622222 7899999998744321 2222222210 0011123334567776554
Q ss_pred HHHHhhccccccccccCCCCCCchHHHhhhhhchhccCCCHHHHHHHhcCC----CCCCCccccHHHHHHHcCCcHHHHH
Q 002479 479 LAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDK----RTSLPEAKDSFFELTLKSKLKEWLL 554 (917)
Q Consensus 479 l~~ll~~~~~~l~il~~~~~~~~l~e~~~~~~~i~~~~~~~~~l~~~l~~~----~~s~~~~~t~L~~aa~~~~l~~~lv 554 (917)
..+.+.... .++..+.+++..... .+...-.+...+|..+...+.+. .++.+.+-+++|.+...+... ..
T Consensus 450 ~g~~~~~~~---~l~~~g~~~n~~s~~-G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~--~~ 523 (1143)
T KOG4177|consen 450 KGRYLQIAR---LLLQYGADPNAVSKQ-GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVK--VA 523 (1143)
T ss_pred cccHhhhhh---hHhhcCCCcchhccc-cCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHH--HH
Confidence 432111111 122234444433221 12222223346666666665443 344455778999998888876 34
Q ss_pred HHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 002479 555 ERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVT 633 (917)
Q Consensus 555 ~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~t 633 (917)
+.+.. |++++.++..|.||||.||..|+..+|++||++|++++.+|+.|+||||.||..|+.+|+.+|+++||++|+
T Consensus 524 ~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna-- 601 (1143)
T KOG4177|consen 524 KILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA-- 601 (1143)
T ss_pred HHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc--
Confidence 44444 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccc
Q 002479 634 DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (917)
Q Consensus 634 dp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~ 668 (917)
.|.+|.|||++|+..|+.+++++|+..+.++
T Consensus 602 ----~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 602 ----ADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred ----ccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 8899999999999999999999999999884
No 27
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.67 E-value=5.1e-16 Score=162.98 Aligned_cols=132 Identities=11% Similarity=0.117 Sum_probs=113.7
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHcCCCCCcccCCCChhHHHHHHcC--CHHHHHHHHHcCCCCcccC-CCCCcHHHHHHH
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGLSLDFRD-KYGWTALHWAAY 612 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~gadvn~~d~~G~T~LHlAa~~G--~~~~v~~LL~~Gadin~~D-~~G~TpLH~Aa~ 612 (917)
..+||+.|+..++.. +++.|+.. ++..|..|.||||+|+..+ +.+++++|+++|+++|.++ ..|+||||+|+.
T Consensus 21 ~~~pL~~A~~~~~~~--~vk~Li~~--~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 21 YCNPLFYYVEKDDIE--GVKKWIKF--VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS 96 (209)
T ss_pred cCcHHHHHHHhCcHH--HHHHHHHh--hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence 468999999999988 56666653 5678899999999999854 8999999999999999997 489999999886
Q ss_pred c---CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHH--cCcHHHHHHHHHhccccccccccccc
Q 002479 613 Y---GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMTLAG 677 (917)
Q Consensus 613 ~---G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~--~g~~~iv~~Ll~~Ga~~~l~~~~l~~ 677 (917)
. ++.+++++|+++|+++|. +|..|.||||+|+. .++.+++++|+++|++.+..+.....
T Consensus 97 ~~~~~~~eiv~~Ll~~gadin~------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t 160 (209)
T PHA02859 97 FNKNVEPEILKILIDSGSSITE------EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNN 160 (209)
T ss_pred hCccccHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCc
Confidence 4 479999999999999998 88999999999876 47899999999999998776654444
No 28
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.67 E-value=6.3e-16 Score=169.37 Aligned_cols=122 Identities=16% Similarity=0.117 Sum_probs=105.2
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcc----cCCCChhHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCcHHH
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEY----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALH 608 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~----d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~-D~~G~TpLH 608 (917)
.+.+++++++...+..+ +++.|++ |+++|.. +..|.||||+|+..|+.+++++|+++|+++|.+ +..|.||||
T Consensus 31 ~~~~~lL~~A~~~~~~e-ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh 109 (300)
T PHA02884 31 ICIANILYSSIKFHYTD-IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLY 109 (300)
T ss_pred CCCCHHHHHHHHcCCHH-HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHH
Confidence 35566666665544344 7778877 9999987 458999999999999999999999999999986 467999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 002479 609 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (917)
Q Consensus 609 ~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~ 663 (917)
+|+..|+.+++++|+.+||+++. +|..|.||||+|+..++..++.++..
T Consensus 110 ~Aa~~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~~ 158 (300)
T PHA02884 110 ISVLHGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMICD 158 (300)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhcC
Confidence 99999999999999999999998 88999999999999999888766653
No 29
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.66 E-value=2.4e-16 Score=173.04 Aligned_cols=129 Identities=16% Similarity=0.220 Sum_probs=120.2
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~ 613 (917)
++-.||-.|+..|++. +++.|+. |+++|.......|||--||.-|+.++|++|+++|+|++..|..|.|.||+||..
T Consensus 83 egappLWaAsaAGHl~--vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~yk 160 (615)
T KOG0508|consen 83 EGAPPLWAASAAGHLE--VVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYK 160 (615)
T ss_pred CCCchhhHHhccCcHH--HHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeecc
Confidence 3557888888889988 7888888 999999888889999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccc
Q 002479 614 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 614 G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~ 671 (917)
||.+|+++|++.|||+|. ++..|.|+||.|+..|+.+|+++|+.+|+.....
T Consensus 161 Gh~~I~qyLle~gADvn~------ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d 212 (615)
T KOG0508|consen 161 GHVDIAQYLLEQGADVNA------KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVD 212 (615)
T ss_pred CchHHHHHHHHhCCCcch------hcccCchHHHhhhhcccHHHHHHHHhCCceeeec
Confidence 999999999999999999 8899999999999999999999999999876544
No 30
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.66 E-value=5.2e-16 Score=187.33 Aligned_cols=156 Identities=14% Similarity=0.012 Sum_probs=124.7
Q ss_pred CHHHHHHHhcCCC-C--C---CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCC--HHHHHH
Q 002479 518 SWAYLFKSVGDKR-T--S---LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILL 588 (917)
Q Consensus 518 ~~~~l~~~l~~~~-~--s---~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~--~~~v~~ 588 (917)
+-.++++.+.+.+ . . ...+.+|||.|+.......-++++|++ |+++|..|..|.||||+|+..|+ .++|++
T Consensus 153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVkl 232 (764)
T PHA02716 153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKK 232 (764)
T ss_pred CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHH
Confidence 4445555554444 2 2 235779999876543322227788887 99999999999999999999995 589999
Q ss_pred HHHcCCCCcccCCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHhcCCCCCC
Q 002479 589 FSWSGLSLDFRDKYGWTALHWA-------------------------------------AYYGREKMVVDLLSAGAKPNL 631 (917)
Q Consensus 589 LL~~Gadin~~D~~G~TpLH~A-------------------------------------a~~G~~eiv~~LL~~GAd~n~ 631 (917)
|+++|+++|.+|..|+||||+| +..|+.+++++|+++|++++.
T Consensus 233 LLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~ 312 (764)
T PHA02716 233 IIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHY 312 (764)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceec
Confidence 9999999999999999999975 345788999999999999988
Q ss_pred CCCCCCCCCCCCcHHHHHHH--cCcHHHHHHHHHhccccccccccccccc
Q 002479 632 VTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 632 ~tdp~~~d~~G~TpL~lA~~--~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
+|..|+||||+|+. .++.+++++|+++|++.+..+.....++
T Consensus 313 ------kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPL 356 (764)
T PHA02716 313 ------KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVL 356 (764)
T ss_pred ------cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHH
Confidence 88999999999864 4688999999999998877665444443
No 31
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.66 E-value=9.8e-16 Score=181.23 Aligned_cols=146 Identities=13% Similarity=0.059 Sum_probs=111.8
Q ss_pred CCccccHHHHHHHcCC--cHHHHHHHHHc-CCCC-CcccCCCChhHHHHHHc--CCHHHHHHHHHcCCCCcc-cCCCCCc
Q 002479 533 LPEAKDSFFELTLKSK--LKEWLLERVVE-GSKT-TEYDVHGQGVIHLCAML--GYTWAILLFSWSGLSLDF-RDKYGWT 605 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~--l~~~lv~~Ll~-gadv-n~~d~~G~T~LHlAa~~--G~~~~v~~LL~~Gadin~-~D~~G~T 605 (917)
...+.+||+.|+..+. ..+ ++++|++ |+++ +..|..|.||||+|+.. ++.++|++|+++|++++. .|..|.|
T Consensus 105 d~~g~tpL~~a~~~~~~~~~e-iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~t 183 (494)
T PHA02989 105 TFNGVSPIVCFIYNSNINNCD-MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLT 183 (494)
T ss_pred CCCCCcHHHHHHHhcccCcHH-HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCC
Confidence 3456788887765532 122 6677776 8888 67888888888887653 578888888888888887 5778888
Q ss_pred HHHHHHHcC----CHHHHHHHHhcCCCCCCCC--------------------------------CCCCCCCCCCcHHHHH
Q 002479 606 ALHWAAYYG----REKMVVDLLSAGAKPNLVT--------------------------------DPTSQNPGGLNAADIA 649 (917)
Q Consensus 606 pLH~Aa~~G----~~eiv~~LL~~GAd~n~~t--------------------------------dp~~~d~~G~TpL~lA 649 (917)
|||+|+..+ +.+++++|+++|++++..+ |++.+|..|.||||+|
T Consensus 184 pL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~A 263 (494)
T PHA02989 184 PMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLIS 263 (494)
T ss_pred hHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHH
Confidence 888887654 7888888888888877543 3466788899999999
Q ss_pred HHcCcHHHHHHHHHhccccccccccccccc
Q 002479 650 SKKGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 650 ~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
+..|+.+++++|+++|++.+..+.....++
T Consensus 264 a~~~~~~~v~~LL~~Gadin~~d~~G~TpL 293 (494)
T PHA02989 264 AKVDNYEAFNYLLKLGDDIYNVSKDGDTVL 293 (494)
T ss_pred HHhcCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 999999999999999998877765555444
No 32
>PHA02795 ankyrin-like protein; Provisional
Probab=99.66 E-value=1e-15 Score=174.03 Aligned_cols=146 Identities=18% Similarity=0.113 Sum_probs=121.2
Q ss_pred CCHHHHHHHhcCCCCCC--CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCc-c-----cCCCChhHHHHHHcCCHHHHH
Q 002479 517 NSWAYLFKSVGDKRTSL--PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-Y-----DVHGQGVIHLCAMLGYTWAIL 587 (917)
Q Consensus 517 ~~~~~l~~~l~~~~~s~--~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~-~-----d~~G~T~LHlAa~~G~~~~v~ 587 (917)
.+..++++.+.+.+.+. .+..+++|.|+..++.. +++.|++ |++.+. . +..|.|++|.|+..++.++++
T Consensus 128 ~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~e--IVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve 205 (437)
T PHA02795 128 YVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESS--VVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYK 205 (437)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHH--HHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHH
Confidence 45556666654444432 34578999999888876 7888888 874332 2 234789999999999999999
Q ss_pred HHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--------cHHHHH
Q 002479 588 LFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--------FDGLAA 659 (917)
Q Consensus 588 ~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g--------~~~iv~ 659 (917)
+|+.+|+++|.+|..|.||||+|+..|+.+++++|+++||+++. +|..|.||||+|+..| +.++++
T Consensus 206 ~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIve 279 (437)
T PHA02795 206 LCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILE 279 (437)
T ss_pred HHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999999999999999999999998 8899999999999988 469999
Q ss_pred HHHHhcccccc
Q 002479 660 FLSEQALVAQF 670 (917)
Q Consensus 660 ~Ll~~Ga~~~l 670 (917)
+|+++|++.+.
T Consensus 280 lLL~~gadI~~ 290 (437)
T PHA02795 280 ILLREPLSIDC 290 (437)
T ss_pred HHHhCCCCCCc
Confidence 99999986543
No 33
>PHA02946 ankyin-like protein; Provisional
Probab=99.65 E-value=1.5e-15 Score=177.06 Aligned_cols=138 Identities=11% Similarity=0.067 Sum_probs=100.0
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCC--HHHHHHHHHcCCCCcc-cCCCCCcHHH
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLDF-RDKYGWTALH 608 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~--~~~v~~LL~~Gadin~-~D~~G~TpLH 608 (917)
..++.||||.|+..++.. ++++|++ |+++|.+|..|.||||+|+..+. .+++++|+.+|+++|. .|..|.||||
T Consensus 69 d~~G~TpLh~Aa~~g~~e--iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~ 146 (446)
T PHA02946 69 DDDGNYPLHIASKINNNR--IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL 146 (446)
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH
Confidence 345677888887777765 6666666 77887777788888887776553 6777778888888774 5777788886
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHHhccccccccccccccc
Q 002479 609 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 609 ~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g--~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
||..|+.+++++|++.|++++. +|..|.||||+|+..+ +.+++++|+++|++.+..+.....++
T Consensus 147 -aa~~~~~~vv~~Ll~~gad~~~------~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpL 212 (446)
T PHA02946 147 -ACTDPSERVFKKIMSIGFEARI------VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPL 212 (446)
T ss_pred -HHHCCChHHHHHHHhccccccc------cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 5566777888888888877776 7778888888877644 45778888888887776665544443
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=99.65 E-value=1.1e-15 Score=178.08 Aligned_cols=155 Identities=12% Similarity=0.091 Sum_probs=116.5
Q ss_pred CCHHHHHHHhcCCC----CCCCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCc-ccCCCChhHHHHHHcCCHHHHHHHH
Q 002479 517 NSWAYLFKSVGDKR----TSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFS 590 (917)
Q Consensus 517 ~~~~~l~~~l~~~~----~s~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~-~d~~G~T~LHlAa~~G~~~~v~~LL 590 (917)
.+...+++.+...+ .....+.||||.|+..++...-++++|+. |+++|. .|..|.|||| ||..|+.+++++|+
T Consensus 82 ~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll 160 (446)
T PHA02946 82 INNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIM 160 (446)
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHH
Confidence 34445555543332 22345789999887765432125666776 999885 6888999997 66678899999999
Q ss_pred HcCCCCcccCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHHhcc
Q 002479 591 WSGLSLDFRDKYGWTALHWAAYYG--REKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQAL 666 (917)
Q Consensus 591 ~~Gadin~~D~~G~TpLH~Aa~~G--~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g--~~~iv~~Ll~~Ga 666 (917)
..|+++|.+|..|+||||+|+..+ +.+++++|+++|++++. +|..|.||||+|+..| +.+++++|+. |+
T Consensus 161 ~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~------~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga 233 (446)
T PHA02946 161 SIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK------PDHDGNTPLHIVCSKTVKNVDIINLLLP-ST 233 (446)
T ss_pred hccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC
Confidence 999999999999999999988755 46889999999998887 7889999999999876 7788888885 77
Q ss_pred ccccccccccccc
Q 002479 667 VAQFNDMTLAGNI 679 (917)
Q Consensus 667 ~~~l~~~~l~~~i 679 (917)
+.+..+.....++
T Consensus 234 din~~d~~G~TpL 246 (446)
T PHA02946 234 DVNKQNKFGDSPL 246 (446)
T ss_pred CCCCCCCCCCCHH
Confidence 7766665555544
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=99.65 E-value=1.4e-15 Score=178.49 Aligned_cols=129 Identities=20% Similarity=0.155 Sum_probs=87.0
Q ss_pred ccccHHHHHHHcC---CcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCCcHHHH
Q 002479 535 EAKDSFFELTLKS---KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG-YTWAILLFSWSGLSLDFRDKYGWTALHW 609 (917)
Q Consensus 535 ~~~t~L~~aa~~~---~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G-~~~~v~~LL~~Gadin~~D~~G~TpLH~ 609 (917)
.+.||||.|+..+ +.. +++.|++ |+++|..|..|.||||+|+..| ..+++++|+++|+++|.+|..|+||||+
T Consensus 46 ~g~t~Lh~a~~~~~~~~~~--iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~ 123 (471)
T PHA03095 46 YGKTPLHLYLHYSSEKVKD--IVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV 123 (471)
T ss_pred CCCCHHHHHHHhcCCChHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 4567777777666 222 5555555 7777777777777777777777 4777777777777777777777777777
Q ss_pred HH--HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHHhccccccc
Q 002479 610 AA--YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 610 Aa--~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g--~~~iv~~Ll~~Ga~~~l~ 671 (917)
|+ ..++.+++++|+++|++++. .|..|.||||+|+..+ +.+++++|+++|++....
T Consensus 124 a~~~~~~~~~iv~~Ll~~gad~~~------~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~ 183 (471)
T PHA03095 124 YLSGFNINPKVIRLLLRKGADVNA------LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAV 183 (471)
T ss_pred HhhCCcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCccc
Confidence 77 44566777777777777666 5667777777666554 456777777777665443
No 36
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.63 E-value=7.4e-16 Score=154.76 Aligned_cols=131 Identities=18% Similarity=0.213 Sum_probs=121.4
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
..+.|||++|+.+|++. ++++|++ |++++...+...++|.+|+..||.++|++||.++.|||..|-+|-|||-+|+.
T Consensus 158 e~GfTpLiWAaa~G~i~--vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIP--VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVR 235 (296)
T ss_pred ccCchHhHHHHhcCchH--HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeec
Confidence 34779999999999998 7888888 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 613 ~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
.||.+||+.||..||+++. .+..|.+++++|+..|+. +++..+++-+...+++.
T Consensus 236 gnhvkcve~Ll~sGAd~t~------e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~ 289 (296)
T KOG0502|consen 236 GNHVKCVESLLNSGADVTQ------EDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDS 289 (296)
T ss_pred CChHHHHHHHHhcCCCccc------ccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcc
Confidence 9999999999999999988 788999999999999998 88888888777666554
No 37
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.63 E-value=2.5e-15 Score=184.60 Aligned_cols=140 Identities=17% Similarity=0.090 Sum_probs=120.1
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
...+.+|||.|+..++..+ ++..|+. |+++|..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 338 d~~g~TpLh~A~~~~~~~~-iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~ 416 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKD-IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAL 416 (682)
T ss_pred ccCCCcHHHHHHHhCCcHH-HHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHH
Confidence 3457799999998776665 5555666 9999999999999999999999999999999999999999999999999998
Q ss_pred HcCC-HHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC-cHHHHHHHHHhccccccccccccccc
Q 002479 612 YYGR-EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 612 ~~G~-~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g-~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
..++ ..++++|++.|+++|. +|..|.||||+|+..| +.+++++|+++|++.+..+.....++
T Consensus 417 ~~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl 480 (682)
T PHA02876 417 CGTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPL 480 (682)
T ss_pred HcCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 7765 4678999999999988 8899999999999876 68999999999999887765555443
No 38
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.63 E-value=3.1e-15 Score=183.85 Aligned_cols=133 Identities=19% Similarity=0.207 Sum_probs=109.8
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-TWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~-~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
.+.+|||.|+..++..+ ++.+|+. |++++..|..|.||||+|+..|+ .+++++|+..|+++|..|..|+||||+|+.
T Consensus 272 ~g~TpLh~Aa~~~~~~~-iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~ 350 (682)
T PHA02876 272 CKNTPLHHASQAPSLSR-LVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQAST 350 (682)
T ss_pred CCCCHHHHHHhCCCHHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHH
Confidence 47788999888887655 5566665 88888888889999999988884 888888888899998888888999998887
Q ss_pred c-CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccc
Q 002479 613 Y-GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 674 (917)
Q Consensus 613 ~-G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~ 674 (917)
. ++.+++.+|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 351 ~~~~~~iv~lLl~~gadin~------~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~ 407 (682)
T PHA02876 351 LDRNKDIVITLLELGANVNA------RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQK 407 (682)
T ss_pred hCCcHHHHHHHHHcCCCCcc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCC
Confidence 5 467888888888888887 7788889999998888888899998888877655443
No 39
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.62 E-value=1.4e-15 Score=147.90 Aligned_cols=128 Identities=20% Similarity=0.241 Sum_probs=106.4
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CC-CCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 002479 538 DSFFELTLKSKLKEWLLERVVE-GS-KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~-ga-dvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~ 615 (917)
.-++.|+.++.+.+ ++.|++ .+ .+|.+|.+|.||||-|+..|+.++|+.|+..||+++.+...||||||-||...+
T Consensus 65 rl~lwaae~nrl~e--V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTE--VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHHhhccHHH--HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 45788888888884 444554 44 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCc-HHHHHHHH-Hhccccccccc
Q 002479 616 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGF-DGLAAFLS-EQALVAQFNDM 673 (917)
Q Consensus 616 ~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~-~~iv~~Ll-~~Ga~~~l~~~ 673 (917)
.+++.+||.+|||+|+ ......||||+|+...+ ...+.+|+ ..++.+.+.+.
T Consensus 143 ~~va~~LLqhgaDVnA------~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn 196 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNA------QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNN 196 (228)
T ss_pred hhHHHHHHhccCcccc------cccccchhhHHhhcccchHHHHHHHhhccccChhhhcC
Confidence 9999999999999999 55678899999997755 44556554 33455544433
No 40
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.62 E-value=1.7e-15 Score=175.87 Aligned_cols=134 Identities=19% Similarity=0.192 Sum_probs=119.7
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHH-cC-CCCcccCCCCCcHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SG-LSLDFRDKYGWTALHWA 610 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~-~G-adin~~D~~G~TpLH~A 610 (917)
.++-||||.||..|+.. .+..|+. |++++.+++++.||||.||.+|..++|+-||+ .| ..+|..|-.|.||||+|
T Consensus 271 ~dg~tpLH~a~r~G~~~--svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHla 348 (929)
T KOG0510|consen 271 NDGCTPLHYAARQGGPE--SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLA 348 (929)
T ss_pred ccCCchHHHHHHcCChh--HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhh
Confidence 45779999999999988 4677777 99999999999999999999999999999998 54 56788999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccc
Q 002479 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 672 (917)
Q Consensus 611 a~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~ 672 (917)
+..||.+++++||.+||+..... ..|.+|.||||+|+..|+..++++|+.+|++....+
T Consensus 349 a~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n 407 (929)
T KOG0510|consen 349 AKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKN 407 (929)
T ss_pred hhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCceeecc
Confidence 99999999999999999987311 148999999999999999999999999999885533
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.61 E-value=2.9e-15 Score=176.96 Aligned_cols=133 Identities=14% Similarity=0.183 Sum_probs=91.3
Q ss_pred CccccHHHHHHHc----CCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCCc
Q 002479 534 PEAKDSFFELTLK----SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG---YTWAILLFSWSGLSLDFRDKYGWT 605 (917)
Q Consensus 534 ~~~~t~L~~aa~~----~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G---~~~~v~~LL~~Gadin~~D~~G~T 605 (917)
..+.||||.++.. .+..+ +++.|++ |+++|.+|..|.||||+|+..| +.+++++|+++|+++|.+|..|+|
T Consensus 69 ~~g~TpL~~~~~n~~~~~~~~~-iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~t 147 (489)
T PHA02798 69 NEYSTPLCTILSNIKDYKHMLD-IVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFT 147 (489)
T ss_pred CCCCChHHHHHHhHHhHHhHHH-HHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCc
Confidence 3466777776542 11122 5666666 7777777777777777777765 567777777777777777777777
Q ss_pred HHHHHHHcCC---HHHHHHHHhcCCCCCCCCCCCCC-CCCCCcHHHHHHHcCc----HHHHHHHHHhccccccccc
Q 002479 606 ALHWAAYYGR---EKMVVDLLSAGAKPNLVTDPTSQ-NPGGLNAADIASKKGF----DGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 606 pLH~Aa~~G~---~eiv~~LL~~GAd~n~~tdp~~~-d~~G~TpL~lA~~~g~----~~iv~~Ll~~Ga~~~l~~~ 673 (917)
|||+|+..|+ .+++++|+++|++++. . +..|.||||.+...+. .+++++|+++|++.+..+.
T Consensus 148 pL~~a~~~~~~~~~~vv~~Ll~~gadin~------~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 148 MLQVYLQSNHHIDIEIIKLLLEKGVDINT------HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK 217 (489)
T ss_pred HHHHHHHcCCcchHHHHHHHHHhCCCccc------ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence 7777777776 7777777777777776 3 3467777777766543 5677777777776655443
No 42
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.61 E-value=4.5e-15 Score=175.60 Aligned_cols=151 Identities=13% Similarity=0.148 Sum_probs=121.5
Q ss_pred CCHHHHHHHhcCCCCCC---CccccHHHHHHHcCCc-----HHHHHHHHHc-CCCCCcccCCCChhHHHHHHc---CCHH
Q 002479 517 NSWAYLFKSVGDKRTSL---PEAKDSFFELTLKSKL-----KEWLLERVVE-GSKTTEYDVHGQGVIHLCAML---GYTW 584 (917)
Q Consensus 517 ~~~~~l~~~l~~~~~s~---~~~~t~L~~aa~~~~l-----~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~---G~~~ 584 (917)
++...+++.+.+.+.+. ..+.|||+.++..+.. .+ ++++|++ |+++|.+|..|.||||.|+.. |+.+
T Consensus 47 ~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~-iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~e 125 (494)
T PHA02989 47 DVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKK-IVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCD 125 (494)
T ss_pred CCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHH-HHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHH
Confidence 33455666664444332 2357899988765432 23 6777777 999999999999999988755 6789
Q ss_pred HHHHHHHcCCCC-cccCCCCCcHHHHHHHc--CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC----cHHH
Q 002479 585 AILLFSWSGLSL-DFRDKYGWTALHWAAYY--GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG----FDGL 657 (917)
Q Consensus 585 ~v~~LL~~Gadi-n~~D~~G~TpLH~Aa~~--G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g----~~~i 657 (917)
++++|+++|+++ +.+|..|+||||+|+.. ++.++|++|+++|++++.. .+..|.||||+|+..+ +.++
T Consensus 126 iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~-----~~~~g~tpL~~a~~~~~~~~~~~i 200 (494)
T PHA02989 126 MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEK-----TSLYGLTPMNIYLRNDIDVISIKV 200 (494)
T ss_pred HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-----ccccCCChHHHHHhcccccccHHH
Confidence 999999999999 89999999999998764 6899999999999998862 4678999999998764 8999
Q ss_pred HHHHHHhccccccccc
Q 002479 658 AAFLSEQALVAQFNDM 673 (917)
Q Consensus 658 v~~Ll~~Ga~~~l~~~ 673 (917)
+++|+++|++.+..+.
T Consensus 201 v~~Ll~~Ga~vn~~~~ 216 (494)
T PHA02989 201 IKYLIKKGVNIETNNN 216 (494)
T ss_pred HHHHHhCCCCccccCC
Confidence 9999999998876654
No 43
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.59 E-value=2.9e-15 Score=155.35 Aligned_cols=128 Identities=18% Similarity=0.253 Sum_probs=113.7
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
.+.+..|||++|..|+.. +++.|+. |+.+|..+....||||+||..|+-++|..||+..+|||..+..|.|||||||
T Consensus 31 ddhgfsplhwaakegh~a--ivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyac 108 (448)
T KOG0195|consen 31 DDHGFSPLHWAAKEGHVA--IVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYAC 108 (448)
T ss_pred cccCcchhhhhhhcccHH--HHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhh
Confidence 356789999999999987 8888888 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccc
Q 002479 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~ 668 (917)
..|...+++-|+.+||.+++ .|+.|.|||+.|.-.-..-+.+.-.++|-.+
T Consensus 109 fwgydqiaedli~~ga~v~i------cnk~g~tpldkakp~l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 109 FWGYDQIAEDLISCGAAVNI------CNKKGMTPLDKAKPMLKNTLLEIAEKHGQSP 159 (448)
T ss_pred hhcHHHHHHHHHhccceeee------cccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998 8899999999886554444555555666544
No 44
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.59 E-value=8.4e-15 Score=131.83 Aligned_cols=88 Identities=28% Similarity=0.338 Sum_probs=75.3
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC
Q 002479 574 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 653 (917)
Q Consensus 574 LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g 653 (917)
||+||..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|++++. +|..|.||||+|+..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence 7889999999999999998888877 88899999999999999999999988887 7788999999999999
Q ss_pred cHHHHHHHHHhccccccc
Q 002479 654 FDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 654 ~~~iv~~Ll~~Ga~~~l~ 671 (917)
+.+++++|+++|++.+..
T Consensus 71 ~~~~~~~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 71 NLEIVKLLLEHGADVNIR 88 (89)
T ss_dssp HHHHHHHHHHTTT-TTSS
T ss_pred CHHHHHHHHHcCCCCCCc
Confidence 999999999998877654
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.58 E-value=2.3e-15 Score=151.26 Aligned_cols=128 Identities=18% Similarity=0.073 Sum_probs=113.6
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHcCCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~ 615 (917)
..+++..++.+.++.. + .++....+|..|+.|.|||.||+..|+..+|++||..|++++..-+.-.|+|.+|+..|.
T Consensus 129 p~s~~slsVhql~L~~--~-~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggy 205 (296)
T KOG0502|consen 129 PWSPLSLSVHQLHLDV--V-DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGY 205 (296)
T ss_pred cCChhhHHHHHHHHHH--H-HHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCCh
Confidence 4467777777776552 1 122367899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccc
Q 002479 616 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 672 (917)
Q Consensus 616 ~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~ 672 (917)
.++|++||.++.|+|. -|.+|.|||-+|+..||.+|++.|++.|++....+
T Consensus 206 tdiV~lLL~r~vdVNv------yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ 256 (296)
T KOG0502|consen 206 TDIVELLLTREVDVNV------YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED 256 (296)
T ss_pred HHHHHHHHhcCCCcce------eccCCCceeeeeecCChHHHHHHHHhcCCCccccc
Confidence 9999999999999998 89999999999999999999999999999875543
No 46
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=3.6e-15 Score=159.56 Aligned_cols=138 Identities=19% Similarity=0.212 Sum_probs=83.8
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc--CCCCCcccCCCChhHHHHHHcC-----CHHHHHHHHHcCCCCcccCC-CCCcH
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLG-----YTWAILLFSWSGLSLDFRDK-YGWTA 606 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~--gadvn~~d~~G~T~LHlAa~~G-----~~~~v~~LL~~Gadin~~D~-~G~Tp 606 (917)
++.|.||+++...|+. ++..|+. -+++|..|.-|.||+++||..- ...+|..|...| |||.+-. .|.|+
T Consensus 267 NGNTALHYsVSHaNF~--VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTA 343 (452)
T KOG0514|consen 267 NGNTALHYAVSHANFD--VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTA 343 (452)
T ss_pred CCCeeeeeeecccchH--HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcchh
Confidence 3556667666666666 5555555 4566666666667766665432 344556565544 5665543 36677
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHh-cccccccccccccccch
Q 002479 607 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ-ALVAQFNDMTLAGNISG 681 (917)
Q Consensus 607 LH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~-Ga~~~l~~~~l~~~i~~ 681 (917)
|++|+.+|+.++|+.||.+|||+|+ +|.+|.|+|++|+.+||++|+++||.. +++.++.+.....+++-
T Consensus 344 LMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~I 413 (452)
T KOG0514|consen 344 LMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSI 413 (452)
T ss_pred hhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhh
Confidence 7777777777777777777776666 666677777777777777766666654 34445544444444433
No 47
>PHA02917 ankyrin-like protein; Provisional
Probab=99.57 E-value=2.7e-14 Score=173.04 Aligned_cols=122 Identities=22% Similarity=0.191 Sum_probs=103.4
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHH--HcCCHHHHHHHHHcCCCCcccCC---CC--------
Q 002479 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYTWAILLFSWSGLSLDFRDK---YG-------- 603 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa--~~G~~~~v~~LL~~Gadin~~D~---~G-------- 603 (917)
.+++.|+..++.. ++++|++ |+++|..|..|.||||+|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 105 ~~~~~a~~~~~~e--~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~ 182 (661)
T PHA02917 105 IFSYMKSKNVDVD--LIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQP 182 (661)
T ss_pred hHHHHHhhcCCHH--HHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccc
Confidence 4455565566665 7888887 9999999999999999654 57899999999999999987654 34
Q ss_pred ---CcHHHHHHH-----------cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcH--HHHHHHHHhccc
Q 002479 604 ---WTALHWAAY-----------YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD--GLAAFLSEQALV 667 (917)
Q Consensus 604 ---~TpLH~Aa~-----------~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~--~iv~~Ll~~Ga~ 667 (917)
.||||+|+. .|+.++|++|+++||++|. +|..|.||||+|+..|+. +++++|++ |++
T Consensus 183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~------~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d 255 (661)
T PHA02917 183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS------IDKNYCTALQYYIKSSHIDIDIVKLLMK-GID 255 (661)
T ss_pred cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc------CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCc
Confidence 599999986 5689999999999999998 889999999999999985 79999985 765
Q ss_pred c
Q 002479 668 A 668 (917)
Q Consensus 668 ~ 668 (917)
.
T Consensus 256 ~ 256 (661)
T PHA02917 256 N 256 (661)
T ss_pred c
Confidence 4
No 48
>PHA02917 ankyrin-like protein; Provisional
Probab=99.56 E-value=2.5e-14 Score=173.35 Aligned_cols=155 Identities=9% Similarity=-0.057 Sum_probs=115.2
Q ss_pred CHHHHHHHhcCCCC----CCCccccHHHHHHHcCCcH--HHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHH
Q 002479 518 SWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 590 (917)
Q Consensus 518 ~~~~l~~~l~~~~~----s~~~~~t~L~~aa~~~~l~--~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL 590 (917)
+...+++.+.+.+. ....+.||||.|+..++.. ..+++.|++ +...|..|. .+++|+|+..|+.++|++|+
T Consensus 46 ~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll 123 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLV 123 (661)
T ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHH
Confidence 34455554433322 2345779999999998743 235666765 444454332 36778889999999999999
Q ss_pred HcCCCCcccCCCCCcHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCCCCC-----------CCCcHHHHHHH------
Q 002479 591 WSGLSLDFRDKYGWTALHWAA--YYGREKMVVDLLSAGAKPNLVTDPTSQNP-----------GGLNAADIASK------ 651 (917)
Q Consensus 591 ~~Gadin~~D~~G~TpLH~Aa--~~G~~eiv~~LL~~GAd~n~~tdp~~~d~-----------~G~TpL~lA~~------ 651 (917)
++|+++|.+|.+|+||||+|+ ..|+.+++++|+++||+++.... .+. .+.||||+|+.
T Consensus 124 ~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~---~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~ 200 (661)
T PHA02917 124 EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE---DDEYGYAYDDYQPRNCGTVLHLYIISHLYSE 200 (661)
T ss_pred HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc---ccccccccccccccccccHHHHHHhhccccc
Confidence 999999999999999999654 57899999999999999986210 222 33699999986
Q ss_pred -----cCcHHHHHHHHHhccccccccccccc
Q 002479 652 -----KGFDGLAAFLSEQALVAQFNDMTLAG 677 (917)
Q Consensus 652 -----~g~~~iv~~Ll~~Ga~~~l~~~~l~~ 677 (917)
.++.+++++|+++|++.+..+.....
T Consensus 201 ~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~T 231 (661)
T PHA02917 201 SDTRAYVRPEVVKCLINHGIKPSSIDKNYCT 231 (661)
T ss_pred ccccccCcHHHHHHHHHCCCCcccCCCCCCc
Confidence 46899999999999998877654444
No 49
>PHA02795 ankyrin-like protein; Provisional
Probab=99.55 E-value=2.4e-14 Score=162.96 Aligned_cols=136 Identities=10% Similarity=-0.028 Sum_probs=117.6
Q ss_pred CccccHHHHHHH--cCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCc-cc-----CCCCC
Q 002479 534 PEAKDSFFELTL--KSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD-FR-----DKYGW 604 (917)
Q Consensus 534 ~~~~t~L~~aa~--~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin-~~-----D~~G~ 604 (917)
....++||.++. .++.. ++++|+. ||+++.. ++.||||.|+..|+.+++++|+++|++++ .. +..|.
T Consensus 114 ~~~~~~L~~~~~n~~n~~e--iV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~ 189 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEID--IVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQY 189 (437)
T ss_pred ccccHHHHHHHHhcCCCHH--HHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhcc
Confidence 346799999998 55555 8888888 9999984 45899999999999999999999998543 22 24588
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccccccccc
Q 002479 605 TALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 605 TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
||+|.|+..++.+++++|+++||++|. +|..|.||||+|+..|+.+++++|+++|++.+..+.....++
T Consensus 190 t~l~~a~~~~~~eIve~LIs~GADIN~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpL 258 (437)
T PHA02795 190 TRGFLVDEPTVLEIYKLCIPYIEDINQ------LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCL 258 (437)
T ss_pred chhHHHHhcCHHHHHHHHHhCcCCcCc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 999999999999999999999999998 889999999999999999999999999999988776555544
No 50
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.55 E-value=1.2e-14 Score=178.65 Aligned_cols=148 Identities=20% Similarity=0.248 Sum_probs=132.2
Q ss_pred CCCCCCCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcH
Q 002479 528 DKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTA 606 (917)
Q Consensus 528 ~~~~s~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~Tp 606 (917)
+.+....++.|+||.++..|+.. ++..+++ ++..+...+.|.|+||+|+..++..+++.++.+|++++.++..|.||
T Consensus 466 ~~n~~s~~G~T~Lhlaaq~Gh~~--~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 466 DPNAVSKQGFTPLHLAAQEGHTE--VVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTP 543 (1143)
T ss_pred CcchhccccCcchhhhhccCCch--HHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccch
Confidence 33444677889999999999987 5566666 77777788899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccccccccchhh
Q 002479 607 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSL 683 (917)
Q Consensus 607 LH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i~~~~ 683 (917)
||.||.+|+.++|++||++||++++ +++.|+||||.|+..|+.+|+.+|+++|++++..+....+.+..+.
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gAdv~a------k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~ 614 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGADVNA------KDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAV 614 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCccccc------cCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHH
Confidence 9999999999999999999999999 8899999999999999999999999999999999888877554433
No 51
>PHA02741 hypothetical protein; Provisional
Probab=99.54 E-value=2.2e-14 Score=145.41 Aligned_cols=107 Identities=23% Similarity=0.247 Sum_probs=94.5
Q ss_pred CCcccCCCChhHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCcHHHHHHHcCC----HHHHHHHHhcCCCCCCC
Q 002479 563 TTEYDVHGQGVIHLCAMLGYTWAILLFSW------SGLSLDFRDKYGWTALHWAAYYGR----EKMVVDLLSAGAKPNLV 632 (917)
Q Consensus 563 vn~~d~~G~T~LHlAa~~G~~~~v~~LL~------~Gadin~~D~~G~TpLH~Aa~~G~----~eiv~~LL~~GAd~n~~ 632 (917)
++..|..|.||||+||..|+.++++.|+. .|+++|.+|..|+||||+|+..|+ .+++++|+.+|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~- 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA- 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence 45678899999999999999999998853 468999999999999999999999 5899999999999987
Q ss_pred CCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHH-hccccccccccc
Q 002479 633 TDPTSQNP-GGLNAADIASKKGFDGLAAFLSE-QALVAQFNDMTL 675 (917)
Q Consensus 633 tdp~~~d~-~G~TpL~lA~~~g~~~iv~~Ll~-~Ga~~~l~~~~l 675 (917)
+|. .|.||||+|+..++.+++++|+. .|++.+..+...
T Consensus 93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g 132 (169)
T PHA02741 93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADN 132 (169)
T ss_pred -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 674 89999999999999999999998 588876665433
No 52
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.54 E-value=2.9e-14 Score=152.66 Aligned_cols=123 Identities=23% Similarity=0.256 Sum_probs=106.7
Q ss_pred cccHHHHHHHcC---CcHHHHHHHHHcCCCCCcc-cCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 536 AKDSFFELTLKS---KLKEWLLERVVEGSKTTEY-DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 536 ~~t~L~~aa~~~---~l~~~lv~~Ll~gadvn~~-d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
+.+|++.+++.. ....-+++.|-.-+|+|.+ ...|+|+|++|+..|..++|+.||..|+|||.+|.+|.|+|++||
T Consensus 302 GYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~ 381 (452)
T KOG0514|consen 302 GYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAA 381 (452)
T ss_pred cccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhh
Confidence 789998877642 2223366666666689884 567999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 002479 612 YYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (917)
Q Consensus 612 ~~G~~eiv~~LL~-~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~ 664 (917)
.+||.+||++||. .++|+.. .|.+|.|+|.+|...||.+|+-+|..+
T Consensus 382 EHGhkEivklLLA~p~cd~sL------tD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 382 EHGHKEIVKLLLAVPSCDISL------TDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred hhChHHHHHHHhccCccccee------ecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 9999999999997 5677776 789999999999999999999888765
No 53
>PHA02730 ankyrin-like protein; Provisional
Probab=99.54 E-value=5.3e-14 Score=167.20 Aligned_cols=128 Identities=14% Similarity=0.043 Sum_probs=97.2
Q ss_pred CccccHHHHHHHcCCc---HHHHHHHHHc-CC--CCCcccCCCChhHHH---HHHcC---------CHHHHHHHHHcCCC
Q 002479 534 PEAKDSFFELTLKSKL---KEWLLERVVE-GS--KTTEYDVHGQGVIHL---CAMLG---------YTWAILLFSWSGLS 595 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l---~~~lv~~Ll~-ga--dvn~~d~~G~T~LHl---Aa~~G---------~~~~v~~LL~~Gad 595 (917)
..+.||||.|+..++. .+ ++++|++ |+ ++|..|..|.||||. |+..+ ..+++++|+.+|++
T Consensus 376 ~~G~TpLH~Aa~~nnn~i~~e-IvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD 454 (672)
T PHA02730 376 TDNNYPLHDYFVNNNNIVDVN-VVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD 454 (672)
T ss_pred CCCCcHHHHHHHHcCCcchHH-HHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccc
Confidence 4577888888877642 23 7777776 66 577788888888883 33222 12458888888888
Q ss_pred CcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCC-CCCcHHHHHHHc--CcHHHHHHHHHhcccc
Q 002479 596 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKK--GFDGLAAFLSEQALVA 668 (917)
Q Consensus 596 in~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~-~G~TpL~lA~~~--g~~~iv~~Ll~~Ga~~ 668 (917)
+|.+|..|+||||+|+..++.+++++|+++||++|. .|. .|.||||+|+.. |+.+++++|+++|++.
T Consensus 455 INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~------~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 455 IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT------TSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 888888888888888888888888888888888887 565 588888888763 7888888888888654
No 54
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.53 E-value=1.4e-14 Score=150.38 Aligned_cols=112 Identities=23% Similarity=0.164 Sum_probs=104.3
Q ss_pred CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCC
Q 002479 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN 639 (917)
Q Consensus 560 gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d 639 (917)
.-|.|.-|..|.+||||||..|+..+|+.||.+|+.||..+....||||+|+.+||.++|+.|++..+|+|+ .|
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna------vn 97 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA------VN 97 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch------hh
Confidence 557888899999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHhccccccccccccc
Q 002479 640 PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 677 (917)
Q Consensus 640 ~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~ 677 (917)
..|.||||+||..|+..|++-|+..|+..++.+-....
T Consensus 98 ehgntplhyacfwgydqiaedli~~ga~v~icnk~g~t 135 (448)
T KOG0195|consen 98 EHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMT 135 (448)
T ss_pred ccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCC
Confidence 99999999999999999999999999988776654443
No 55
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.53 E-value=4e-14 Score=127.38 Aligned_cols=86 Identities=30% Similarity=0.392 Sum_probs=78.1
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 002479 540 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 618 (917)
Q Consensus 540 L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei 618 (917)
||.|+..++.. +++.|++ +.+++. |.||||+||..|+.+++++|++.|+++|.+|.+|+||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~--~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLE--ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHH--HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHH--HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence 68899999987 6777777 877766 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCC
Q 002479 619 VVDLLSAGAKPNL 631 (917)
Q Consensus 619 v~~LL~~GAd~n~ 631 (917)
+++|+++|++++.
T Consensus 75 ~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 75 VKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHTTT-TTS
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999987
No 56
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.51 E-value=4.9e-14 Score=120.79 Aligned_cols=73 Identities=22% Similarity=0.364 Sum_probs=66.1
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCC-CCCceEEEEEEeCCCCcc
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HSPGLFLLYMSLDGHKPI 444 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pp-h~~G~V~l~v~~~n~~~~ 444 (917)
.|+.++|+||++.||++|+|+|.+|.+ ++.|+||++.+-.++|++.+|+|.+|| |.||.|.+++......-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 499999999999999999999976644 599999999999999999999999999 799999999999777655
Q ss_pred c
Q 002479 445 S 445 (917)
Q Consensus 445 s 445 (917)
.
T Consensus 75 ~ 75 (85)
T cd01175 75 K 75 (85)
T ss_pred c
Confidence 3
No 57
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.50 E-value=6.7e-14 Score=157.23 Aligned_cols=137 Identities=23% Similarity=0.251 Sum_probs=120.1
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCc--------------
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD-------------- 597 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin-------------- 597 (917)
..++.|+||.+|+..+.. ++.+|++ |++||..|..|+||||.|+..||..++++||.+|+++-
T Consensus 70 n~DglTalhq~~id~~~e--~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e 147 (527)
T KOG0505|consen 70 NVDGLTALHQACIDDNLE--MVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAE 147 (527)
T ss_pred CCccchhHHHHHhcccHH--HHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcccccc
Confidence 456889999999999987 6777777 99999999999999999999999999999998665422
Q ss_pred ---------------------------------------------ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 002479 598 ---------------------------------------------FRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLV 632 (917)
Q Consensus 598 ---------------------------------------------~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~ 632 (917)
.++..|-|+||.|+..|..++.++|+.+|.++++
T Consensus 148 ~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~- 226 (527)
T KOG0505|consen 148 DEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI- 226 (527)
T ss_pred CcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc-
Confidence 2234589999999999999999999999999998
Q ss_pred CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccccccc
Q 002479 633 TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 677 (917)
Q Consensus 633 tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~ 677 (917)
+|.+|+||||.|+..|+.+++++|+++|++.+........
T Consensus 227 -----~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~ 266 (527)
T KOG0505|consen 227 -----KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGET 266 (527)
T ss_pred -----ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCC
Confidence 9999999999999999999999999999987665544433
No 58
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.49 E-value=7.8e-14 Score=141.10 Aligned_cols=110 Identities=21% Similarity=0.161 Sum_probs=96.3
Q ss_pred CCCCCcccCCCChhHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH---HHHHHhcCCCCCCC
Q 002479 560 GSKTTEYDVHGQGVIHLCAMLGYT----WAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM---VVDLLSAGAKPNLV 632 (917)
Q Consensus 560 gadvn~~d~~G~T~LHlAa~~G~~----~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei---v~~LL~~GAd~n~~ 632 (917)
|++++..+.++.++||.||..|.. +++++|+..|++++.+|..|+||||+|+..|+.++ +++|+.+|+++|.
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~- 88 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA- 88 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC-
Confidence 667777888999999999999997 66678889999999999999999999999998654 8999999999998
Q ss_pred CCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHH-hccccccccccc
Q 002479 633 TDPTSQN-PGGLNAADIASKKGFDGLAAFLSE-QALVAQFNDMTL 675 (917)
Q Consensus 633 tdp~~~d-~~G~TpL~lA~~~g~~~iv~~Ll~-~Ga~~~l~~~~l 675 (917)
+| ..|.||||+|+..|+.+++++|++ .|++....+...
T Consensus 89 -----~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 128 (166)
T PHA02743 89 -----RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQH 128 (166)
T ss_pred -----CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCC
Confidence 76 489999999999999999999995 798876655433
No 59
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.48 E-value=2.5e-13 Score=158.05 Aligned_cols=149 Identities=17% Similarity=0.131 Sum_probs=103.6
Q ss_pred cCCCCCCCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHH-----cCCCCcccC
Q 002479 527 GDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-----SGLSLDFRD 600 (917)
Q Consensus 527 ~~~~~s~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~-----~Gadin~~D 600 (917)
.+.+...+.+.||||.||..++.+ ..+.|++ |+++...|.+|.+|+|.|+..|..++.+.++. ++..||.-|
T Consensus 145 ~dvnl~de~~~TpLh~A~~~~~~E--~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~ 222 (929)
T KOG0510|consen 145 ADVNLEDENGFTPLHLAARKNKVE--AKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDN 222 (929)
T ss_pred CCccccccCCCchhhHHHhcChHH--HHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhccccccc
Confidence 333444455677888888877766 4455555 88887777788888888888888888777776 567777777
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC---------CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccc
Q 002479 601 KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVT---------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 601 ~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~t---------dp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~ 671 (917)
..|.||||.|+..|+.++++.+|++|+....+- -.+-.|.+|.||||+|+..|+.+.++.|+..|++.+.+
T Consensus 223 n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k 302 (929)
T KOG0510|consen 223 NEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK 302 (929)
T ss_pred CCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc
Confidence 777777777777777777777777665442210 11226777777777777777777777777777777776
Q ss_pred cccccc
Q 002479 672 DMTLAG 677 (917)
Q Consensus 672 ~~~l~~ 677 (917)
+-+-+.
T Consensus 303 n~d~~s 308 (929)
T KOG0510|consen 303 NKDEES 308 (929)
T ss_pred CCCCCC
Confidence 644444
No 60
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.47 E-value=2.2e-13 Score=149.39 Aligned_cols=110 Identities=13% Similarity=-0.014 Sum_probs=95.0
Q ss_pred CcccCCCChh-HHHHHHcCCHHHHHHHHHcCCCCcccC----CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCC
Q 002479 564 TEYDVHGQGV-IHLCAMLGYTWAILLFSWSGLSLDFRD----KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQ 638 (917)
Q Consensus 564 n~~d~~G~T~-LHlAa~~G~~~~v~~LL~~Gadin~~D----~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~ 638 (917)
-.+|..|.|+ ||.|+..|+.+++++|+++|+++|.+| ..|.||||+|+..|+.+++++|+++||++|. +
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------~ 99 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------Y 99 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------c
Confidence 3466777765 555667789999999999999999984 5899999999999999999999999999997 4
Q ss_pred -CCCCCcHHHHHHHcCcHHHHHHHHHhccccccccccccccc
Q 002479 639 -NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 639 -d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
+..|.||||+|+..|+.+++++|+++|++.+..+.....++
T Consensus 100 ~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL 141 (300)
T PHA02884 100 AEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPI 141 (300)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 35799999999999999999999999999988766554444
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=99.46 E-value=3.1e-13 Score=159.19 Aligned_cols=142 Identities=15% Similarity=0.098 Sum_probs=114.5
Q ss_pred HHHHHHHhcCCCCCCC--ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCC--ChhHHHHHHcCCH---HHHHHHH
Q 002479 519 WAYLFKSVGDKRTSLP--EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG--QGVIHLCAMLGYT---WAILLFS 590 (917)
Q Consensus 519 ~~~l~~~l~~~~~s~~--~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G--~T~LHlAa~~G~~---~~v~~LL 590 (917)
..++++.+.+.+.+.. ...+.++.|+..++.. ++++|++ |+++|..|..| .||||+|+..+.. .++++|+
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~e--IVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI 397 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPK--VVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK 397 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHH--HHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence 3455555555554432 3456788888888877 8888888 99999988775 6999988776654 3578899
Q ss_pred HcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHH----------cCcHHHHHH
Q 002479 591 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK----------KGFDGLAAF 660 (917)
Q Consensus 591 ~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~----------~g~~~iv~~ 660 (917)
.+|+++|.+|..|+||||+|+..++.+++++|+++||+++. +|..|.|||++|+. ....+++++
T Consensus 398 s~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~------kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~l 471 (631)
T PHA02792 398 PYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI------TTKYGSTCIGICVILAHACIPEIAELYIKILEI 471 (631)
T ss_pred hcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 88999999999976 223567888
Q ss_pred HHHhcccc
Q 002479 661 LSEQALVA 668 (917)
Q Consensus 661 Ll~~Ga~~ 668 (917)
|+++|.+.
T Consensus 472 LLs~~p~i 479 (631)
T PHA02792 472 ILSKLPTI 479 (631)
T ss_pred HHhcCCCh
Confidence 88888554
No 62
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.46 E-value=1.6e-13 Score=154.21 Aligned_cols=140 Identities=22% Similarity=0.350 Sum_probs=125.2
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 002479 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ 616 (917)
..++.||..+.+.+ ++.|+. |+++|..+.+|.|+||-||.-.+.+||++|+++|++||..|..||||||-|+.+||.
T Consensus 42 a~~l~A~~~~d~~e--v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 42 AVFLEACSRGDLEE--VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYL 119 (527)
T ss_pred HHHHhccccccHHH--HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccH
Confidence 46788888888886 444555 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCC-----------------------------------------------------CCCCCCCCCC
Q 002479 617 KMVVDLLSAGAKPNLVT-----------------------------------------------------DPTSQNPGGL 643 (917)
Q Consensus 617 eiv~~LL~~GAd~n~~t-----------------------------------------------------dp~~~d~~G~ 643 (917)
.++.+|+.+||++.+++ ++.+.+..|-
T Consensus 120 ~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~ 199 (527)
T KOG0505|consen 120 NIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGA 199 (527)
T ss_pred HHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccc
Confidence 99999999999886653 4556777799
Q ss_pred cHHHHHHHcCcHHHHHHHHHhccccccccccccccc
Q 002479 644 NAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI 679 (917)
Q Consensus 644 TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i 679 (917)
|+||+|+.+|+.+++++|+.+|.+.++.+...=+.+
T Consensus 200 T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPl 235 (527)
T KOG0505|consen 200 TALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPL 235 (527)
T ss_pred hHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcc
Confidence 999999999999999999999999998887765544
No 63
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.44 E-value=1.6e-12 Score=121.94 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=110.3
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
..+.++|+.|+..++.. +++.|+. |.+.+..+..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+.
T Consensus 5 ~~g~t~l~~a~~~~~~~--~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 5 EDGRTPLHLAASNGHLE--VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCCCCHHHHHHHcCcHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 35779999999999875 6666666 88888899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 002479 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 662 (917)
Q Consensus 613 ~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll 662 (917)
.++.+++++|+..|.+++. .|..|.||+++|...++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999999988777 7889999999999999999999874
No 64
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.42 E-value=9.4e-13 Score=164.81 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=97.5
Q ss_pred CCCCCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCC--------------------------
Q 002479 530 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-------------------------- 582 (917)
Q Consensus 530 ~~s~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~-------------------------- 582 (917)
+.....+.||||.|+..|+.. +++.|++ |+++|..|.+|.||||+|+..|+
T Consensus 552 n~~d~~G~TpLh~Aa~~g~~~--~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~A 629 (823)
T PLN03192 552 DIGDSKGRTPLHIAASKGYED--CVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTA 629 (823)
T ss_pred CCCCCCCCCHHHHHHHcChHH--HHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHH
Confidence 344456889999999999876 5667777 99999999999999886655554
Q ss_pred -----HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCC-CcHHHHHHHc
Q 002479 583 -----TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKK 652 (917)
Q Consensus 583 -----~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G-~TpL~lA~~~ 652 (917)
.++++.|+++|+++|.+|.+|+||||+|+..|+.+++++|+++||+++. .|..| .||++++...
T Consensus 630 a~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~------~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 630 AKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK------ANTDDDFSPTELRELL 699 (823)
T ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHH
Confidence 5556677889999999999999999999999999999999999999998 67777 9999887554
No 65
>PHA02730 ankyrin-like protein; Provisional
Probab=99.42 E-value=7.1e-13 Score=157.70 Aligned_cols=133 Identities=9% Similarity=-0.024 Sum_probs=114.0
Q ss_pred CccccHHHHHHHcCC--cHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcC--CHHHHHHHHHcCC--CCcccCCCCCcH
Q 002479 534 PEAKDSFFELTLKSK--LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGL--SLDFRDKYGWTA 606 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~--l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G--~~~~v~~LL~~Ga--din~~D~~G~Tp 606 (917)
.++.|+||.|+..++ ..+ ++++|++ |++++.+|..|.||||+|+..| +.++|++|++.|+ +++..|.-++||
T Consensus 39 ~~G~TaLh~A~~~~~~~~~e-ivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~ 117 (672)
T PHA02730 39 RRGNNALHCYVSNKCDTDIK-IVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFD 117 (672)
T ss_pred CCCCcHHHHHHHcCCcCcHH-HHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCch
Confidence 357899999999874 233 8888888 9999999999999999999977 7999999999965 558888889999
Q ss_pred HHHHHH--cCCHHHHHHHHh-cCCCCCCCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHHhccccc
Q 002479 607 LHWAAY--YGREKMVVDLLS-AGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (917)
Q Consensus 607 LH~Aa~--~G~~eiv~~LL~-~GAd~n~~tdp~~~d-~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~ 669 (917)
||.++. .++.++|++|+. .|++++... +..+ ..|.+|+++|+..++.+++++|+++|++.+
T Consensus 118 l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~--~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~ 182 (672)
T PHA02730 118 LYSYMSSDNIDLRLLKYLIVDKRIRPSKNT--NYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYST 182 (672)
T ss_pred HHHHHHhcCCcHHHHHHHHHhcCCChhhhh--hhhccccchhhhhHhcCCCchHHHHHHHHcCCccc
Confidence 999999 899999999996 778888621 1122 379999999999999999999999999984
No 66
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.42 E-value=3.5e-13 Score=118.43 Aligned_cols=104 Identities=25% Similarity=0.303 Sum_probs=90.8
Q ss_pred HHHHHHHcCCcHHHHHHHHHcCCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 002479 539 SFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 618 (917)
Q Consensus 539 ~L~~aa~~~~l~~~lv~~Ll~gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei 618 (917)
.+.++..+|.+.+ +...+.+|-++|..- .|++|||+||-+|...++++|+..|++|+.+|+.|-|||.-|+..||.+|
T Consensus 5 ~~~W~vkNG~~De-Vk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 5 SVAWNVKNGEIDE-VKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hHhhhhccCcHHH-HHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 4567777787776 666666688888754 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 002479 619 VVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 650 (917)
Q Consensus 619 v~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~ 650 (917)
|++||.+||+-.. ..++|.+.+..+-
T Consensus 83 VklLL~~GAdrt~------~~PdG~~~~eate 108 (117)
T KOG4214|consen 83 VKLLLQNGADRTI------HAPDGTALIEATE 108 (117)
T ss_pred HHHHHHcCcccce------eCCCchhHHhhcc
Confidence 9999999999877 6788988887553
No 67
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=99.40 E-value=1.1e-12 Score=157.58 Aligned_cols=455 Identities=18% Similarity=0.184 Sum_probs=236.7
Q ss_pred ceEEEeCCccccee--e--cccCeeEEeCC-----CC--CCceEEEEEE-eCCCC-----ccc--cccccccCCC-cccc
Q 002479 400 NMFCVCGEVRVPAE--F--VQAGVYRCFLP-----PH--SPGLFLLYMS-LDGHK-----PIS--QVLNFEYRSP-QLHA 459 (917)
Q Consensus 400 ~~~c~FG~~~Vpa~--~--i~~gvlrC~~P-----ph--~~G~V~l~v~-~~n~~-----~~s--e~~~Feyr~~-~~~~ 459 (917)
.|+-.=|++.|-.+ . ...+.+-|.+- +- .+|+.-=+.- ++.|. .|+ ...-|||++- ....
T Consensus 413 ~Wsy~~ggvKVlV~G~~~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~ 492 (975)
T KOG0520|consen 413 EWSYLDGGVKVLVTGFPQDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQ 492 (975)
T ss_pred ccccCCCCcEEEEecCccccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehheeeccc
Confidence 58888888775443 2 34568888765 22 4666532221 12222 344 6778888873 3333
Q ss_pred cCCCcccccchhHHHHHHHHHHHhhccccccccccCCCCCCchHHHhhh-hhchhccCCCHHHHHHHhcCCCCCCCcccc
Q 002479 460 PVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKF-ASKSTCISNSWAYLFKSVGDKRTSLPEAKD 538 (917)
Q Consensus 460 ~~~~~~d~~~~~e~~l~~Rl~~ll~~~~~~l~il~~~~~~~~l~e~~~~-~~~i~~~~~~~~~l~~~l~~~~~s~~~~~t 538 (917)
.... .|...|+++.+++++...|.... ....++ ....+ .++......+
T Consensus 493 ~~~~-~d~~s~~d~~~~~sl~~rl~~~~---------------~r~~~~~~s~~~-------------~~n~~~~~~~-- 541 (975)
T KOG0520|consen 493 PSQQ-IDKLSWEDFLFQMSLLHRLETML---------------NRKQSILSSKPS-------------TENTSDAESG-- 541 (975)
T ss_pred Cccc-ccccccccchhhhHHHHHHHHHH---------------HHhHhHhhccCC-------------ccccccccch--
Confidence 3333 34455999999999987652111 000000 00000 0000000000
Q ss_pred HHHHHHHcCCcHHHHHHHHHc--CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCC
Q 002479 539 SFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAAYYGR 615 (917)
Q Consensus 539 ~L~~aa~~~~l~~~lv~~Ll~--gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~-Gadin~~D~~G~TpLH~Aa~~G~ 615 (917)
.|... ..--..+|.-..+.. ..........|+|.||+++..+|.|+++.+++- |-..+..|.+|.--+|+ |..++
T Consensus 542 ~l~sk-v~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg 619 (975)
T KOG0520|consen 542 NLASK-VVHLLNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALG 619 (975)
T ss_pred hHHHH-HHHHHHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcC
Confidence 01111 111112222222222 334455667899999999999999999999975 66666778888888888 66777
Q ss_pred HHHHHHHHh-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccccccccchhhhcccc-ccccc
Q 002479 616 EKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSLQTGST-ITVDT 693 (917)
Q Consensus 616 ~eiv~~LL~-~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i~~~~~~~~~-~~~~~ 693 (917)
.+++-+|+. .|..++. +|..|+||||+|+..|+..++..|++.|++..+..-+..+...|....... .....
T Consensus 620 ~ewA~ll~~~~~~ai~i------~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~ 693 (975)
T KOG0520|consen 620 YEWAFLPISADGVAIDI------RDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHK 693 (975)
T ss_pred CceeEEEEeeccccccc------ccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccccc
Confidence 888777765 6777777 899999999999999999999999999988764322222211111111110 00000
Q ss_pred C---CccchhhHHHhhHHHHhhhH-------HHHHHHHHHHhhhhhhhhhHHhhcCChHHHHHHHHHHHHHHHHHHhHHH
Q 002479 694 Q---NLTEDEVYLKDTLSAYRTAA-------EAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEV 763 (917)
Q Consensus 694 ~---~~~~~q~slk~sL~a~r~~~-------~Aa~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~ 763 (917)
+ .+.+. +|...+..+.... ......|...-+--.-......-.+.+-...-...||.+||.++|....
T Consensus 694 gia~~lse~--~L~~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~ 771 (975)
T KOG0520|consen 694 GIAGYLSEK--ALSAHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSF 771 (975)
T ss_pred chHHHHhhh--HHHHHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhh
Confidence 0 00000 0100000000000 0000000000000000000000000000122345677888888887655
Q ss_pred HHhHH----------------HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 764 RKKMA----------------AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWR 827 (917)
Q Consensus 764 rr~~~----------------aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~iR~~r 827 (917)
++... ..+.++..++++..|. .-.++..||.++|+|+.|+.|...+..++.||+.+|++
T Consensus 772 ~~~~a~~i~~~~~~~i~~~~~~~m~~~~a~~~~~~r~----~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~- 846 (975)
T KOG0520|consen 772 QKKQAREIMDATKEQISEELAVSMKASSAFSMCDDRS----DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGY- 846 (975)
T ss_pred hhhhHHHHHhhcchhhhhhhhhhhhcccchhcCcccc----chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhch-
Confidence 54322 1222233333222111 12388999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhccCCCCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHH
Q 002479 828 LKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRASR-KQAEERVERSVVRVQSMFRSKKAQ--EEYRRMKLAHDQAKL 903 (917)
Q Consensus 828 ~~r~~lr~~r~~~~~~~~~~~q~~~~~~~~~~~r~~R-~q~~~~~~~A~~~IQs~~R~~~aR--~qy~rlk~~~~~~k~ 903 (917)
..|+.++.+---..+....++ ....++..||.++ ++..+....|++.||...|.++.- +-|++|..+.-.++.
T Consensus 847 q~r~dy~ki~wSv~~lek~~l---rwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQs 922 (975)
T KOG0520|consen 847 QVRKDYRKITWSVGVLEKLIL---RWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQS 922 (975)
T ss_pred hHhhhhheechhhhHHHHHHH---HHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556555443211100000000 0012222333322 224445666889999999877765 556666555444443
No 68
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.39 E-value=2.1e-12 Score=133.79 Aligned_cols=123 Identities=31% Similarity=0.429 Sum_probs=112.2
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCC-----HHHHHHHHHcCC---CCcccCCCCCc
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-----TWAILLFSWSGL---SLDFRDKYGWT 605 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~-----~~~v~~LL~~Ga---din~~D~~G~T 605 (917)
...++++.++..+... .+..++. |++++..|..|.||||+|+..|+ .+++++|+..|+ +.+.+|..|+|
T Consensus 72 ~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t 149 (235)
T COG0666 72 DGRLPLHSAASKGDDK--IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT 149 (235)
T ss_pred cccCHHHHHHHcCcHH--HHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence 3678999999888876 4444555 99999999999999999999999 999999999999 66667999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 606 pLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
|||+|+..|+.+++.+|++.|++++. .+..|.||+++|+..++..++..|+..+
T Consensus 150 pl~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 150 PLHWAALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred hhHHHHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999988 7899999999999999999999999987
No 69
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=6.8e-13 Score=147.22 Aligned_cols=120 Identities=22% Similarity=0.299 Sum_probs=104.7
Q ss_pred HHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 002479 539 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 617 (917)
Q Consensus 539 ~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~e 617 (917)
-|+.|++.|.+. |+...+. -.|+...+..|.|+||-|+..||.+||++||..|++||..|.+||||||+|+.+++..
T Consensus 553 LLLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 553 LLLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 467888899887 6776665 5577778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHH--HcCcHHHHHHHHHhc
Q 002479 618 MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS--KKGFDGLAAFLSEQA 665 (917)
Q Consensus 618 iv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~--~~g~~~iv~~Ll~~G 665 (917)
+++.|++.||.+-+.| -.++.||.+-+- ..|+.+|..||....
T Consensus 631 ~ckqLVe~GaavfAsT-----lSDmeTa~eKCee~eeGY~~CsqyL~~vq 675 (752)
T KOG0515|consen 631 MCKQLVESGAAVFAST-----LSDMETAAEKCEEMEEGYDQCSQYLYGVQ 675 (752)
T ss_pred HHHHHHhccceEEeee-----cccccchhhhcchhhhhHHHHHHHHHHHH
Confidence 9999999999987633 367899999775 458999999997543
No 70
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.38 E-value=5.1e-13 Score=154.53 Aligned_cols=126 Identities=20% Similarity=0.184 Sum_probs=117.6
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~ 613 (917)
++.|.||+|+++|+.. ++.+|++ .+-++.+|..|.+|||+||+.|+.++++.|+.++..+|.....|.||||.|+.+
T Consensus 48 ~gfTalhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cchhHHHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 5789999999999988 7888887 888888999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccc
Q 002479 614 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (917)
Q Consensus 614 G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~ 668 (917)
||.+++.+||.+|+|+-. .|+.+.|+|++|+..|..++++.|+....+.
T Consensus 126 gh~dvv~~Ll~~~adp~i------~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~ 174 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFI------RNNSKETVLDLASRFGRAEVVQMLLQKKFPV 174 (854)
T ss_pred cchHHHHHHHhcCCCccc------cCcccccHHHHHHHhhhhHHHHHHhhhccch
Confidence 999999999999998877 8999999999999999999999999985443
No 71
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.38 E-value=1.9e-12 Score=134.90 Aligned_cols=125 Identities=24% Similarity=0.261 Sum_probs=109.5
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHcCC-CCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHH
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVEGS-KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWA 610 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~ga-dvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~-~D~~G~TpLH~A 610 (917)
.++...+|+.+..+|+... .. -|+++. ++|..|..|+|+|..|+..|+.++|++||+.|+|||. ++..++||||+|
T Consensus 9 ld~~~~~Lle~i~Kndt~~-a~-~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEA-AL-ALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFA 86 (396)
T ss_pred ccchhhHHHHHHccCcHHH-HH-HHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHH
Confidence 3456789999999999876 23 344544 4999999999999999999999999999999999996 466799999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 611 a~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
+..|+.++..+|++.||.+.. .|.-|+|+..+|+.-|+.+++..+-.+-
T Consensus 87 ALSGn~dvcrllldaGa~~~~------vNsvgrTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARMYL------VNSVGRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred HHcCCchHHHHHHhccCcccc------ccchhhhHHHHHHHhcchHHHHHHhccc
Confidence 999999999999999999998 7789999999999999999998775543
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=99.37 E-value=2.5e-12 Score=151.65 Aligned_cols=132 Identities=14% Similarity=-0.007 Sum_probs=112.7
Q ss_pred hcCCCCCCCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHH-cCCHHHHHHHHHcCCCCc------
Q 002479 526 VGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAM-LGYTWAILLFSWSGLSLD------ 597 (917)
Q Consensus 526 l~~~~~s~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~-~G~~~~v~~LL~~Gadin------ 597 (917)
+.+.+.+-.++.++++..|..+.-.+ +++.|+. |+++|.++..|.||||+|+. .|+.+++++||++||+++
T Consensus 61 ~~~~~~~n~~~~~~~~~~~s~n~~lE-lvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g 139 (631)
T PHA02792 61 LSSVDYKNINDFDIFEYLCSDNIDIE-LLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYG 139 (631)
T ss_pred HhCCCcCccCCccHHHHHHHhcccHH-HHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccC
Confidence 34444444567789988887766655 7888877 99999999999999999966 699999999999998743
Q ss_pred ------------------------------ccCCCCCcHHHHHHHcC-------CHHHHHHHHhcCCCCCCCCCCCCCCC
Q 002479 598 ------------------------------FRDKYGWTALHWAAYYG-------REKMVVDLLSAGAKPNLVTDPTSQNP 640 (917)
Q Consensus 598 ------------------------------~~D~~G~TpLH~Aa~~G-------~~eiv~~LL~~GAd~n~~tdp~~~d~ 640 (917)
..|..|.||||+|+..+ +.+++++|+++||+++. .|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~------~d~ 213 (631)
T PHA02792 140 YKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY------YTY 213 (631)
T ss_pred cchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc------cCC
Confidence 34667999999999999 89999999999999998 788
Q ss_pred CCCcHHHHHHHcC--cHHHHHHHHHh
Q 002479 641 GGLNAADIASKKG--FDGLAAFLSEQ 664 (917)
Q Consensus 641 ~G~TpL~lA~~~g--~~~iv~~Ll~~ 664 (917)
.|.||||+|+.+. ..+++++|+..
T Consensus 214 ~g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 214 REHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred CCChHHHHHHHcccchHHHHHHHHhc
Confidence 9999999999999 88999999874
No 73
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.36 E-value=1.3e-12 Score=130.17 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=86.1
Q ss_pred CccccHHHHHHHcCCcHH-HHHHHHHc-CCCCCccc-CCCChhHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHH
Q 002479 534 PEAKDSFFELTLKSKLKE-WLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHW 609 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~-~lv~~Ll~-gadvn~~d-~~G~T~LHlAa~~G~~~~v~~LL~-~Gadin~~D~~G~TpLH~ 609 (917)
..+.++||.|+..++... -+++.|+. |+++|.+| ..|.||||+|+..|+.+++++|+. .|+++|.+|..|+||||+
T Consensus 53 ~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~ 132 (154)
T PHA02736 53 RHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYV 132 (154)
T ss_pred CCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHH
Confidence 357899999999887641 14566666 99999988 599999999999999999999997 599999999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCC
Q 002479 610 AAYYGREKMVVDLLSAGAKPN 630 (917)
Q Consensus 610 Aa~~G~~eiv~~LL~~GAd~n 630 (917)
|+..|+.+++++|+.+|++++
T Consensus 133 A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 133 ACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999875
No 74
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.36 E-value=2.3e-12 Score=160.06 Aligned_cols=149 Identities=17% Similarity=0.038 Sum_probs=113.3
Q ss_pred hccCCCHHHHHHHhcCCCCCCCccccHHHHHHHcCC-cHHHHHHHHHc-CCC------CCc----ccCCCChhHHHHHHc
Q 002479 513 TCISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKSK-LKEWLLERVVE-GSK------TTE----YDVHGQGVIHLCAML 580 (917)
Q Consensus 513 ~~~~~~~~~l~~~l~~~~~s~~~~~t~L~~aa~~~~-l~~~lv~~Ll~-gad------vn~----~d~~G~T~LHlAa~~ 580 (917)
.+..++..++.+.+...+.....+.++||.|+..+. ..+.++.++.. +.+ ++. .+..|.||||+||..
T Consensus 59 ~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~ 138 (743)
T TIGR00870 59 AAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHR 138 (743)
T ss_pred HHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHh
Confidence 445577777777776555444568889998876321 12234555444 321 111 235699999999999
Q ss_pred CCHHHHHHHHHcCCCCcccC--------------CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHH
Q 002479 581 GYTWAILLFSWSGLSLDFRD--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAA 646 (917)
Q Consensus 581 G~~~~v~~LL~~Gadin~~D--------------~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL 646 (917)
|+.++|++|+++|+++|.++ ..|.||||+|+..|+.+++++|+++|+|++. +|..|+|||
T Consensus 139 ~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~------~d~~g~T~L 212 (743)
T TIGR00870 139 QNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT------ADSLGNTLL 212 (743)
T ss_pred CCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh------HhhhhhHHH
Confidence 99999999999999999763 3599999999999999999999999999988 889999999
Q ss_pred HHHHHcC---------cHHHHHHHHHhccc
Q 002479 647 DIASKKG---------FDGLAAFLSEQALV 667 (917)
Q Consensus 647 ~lA~~~g---------~~~iv~~Ll~~Ga~ 667 (917)
|+|+..+ ...+.+++++.++.
T Consensus 213 h~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 213 HLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 9999987 33466777776654
No 75
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.34 E-value=3.1e-12 Score=124.77 Aligned_cols=121 Identities=18% Similarity=0.149 Sum_probs=100.9
Q ss_pred CCccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 533 ~~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
..++.||||.|+..|++. ++..|+. |++++.+...|+||||-||.-.+.+++.+||.+|+|||+.....+||||+||
T Consensus 94 D~D~YTpLHRAaYn~h~d--iv~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa 171 (228)
T KOG0512|consen 94 DEDEYTPLHRAAYNGHLD--IVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAA 171 (228)
T ss_pred ccccccHHHHHHhcCchH--HHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhh
Confidence 356889999999999988 6666555 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHH-HHHHHHh-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 002479 612 YYGREK-MVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (917)
Q Consensus 612 ~~G~~e-iv~~LL~-~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~ 664 (917)
.+.+.. .+.+|+. .+..+.. ++..+.||+++|..-+ +..+|.+.
T Consensus 172 ~~rn~r~t~~~Ll~dryi~pg~------~nn~eeta~~iARRT~---~s~~lfe~ 217 (228)
T KOG0512|consen 172 GNRNSRDTLELLLHDRYIHPGL------KNNLEETAFDIARRTS---MSHYLFEI 217 (228)
T ss_pred cccchHHHHHHHhhccccChhh------hcCccchHHHHHHHhh---hhHHHHHH
Confidence 886654 4555553 5666665 8899999999998764 34444443
No 76
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.34 E-value=2.1e-12 Score=160.31 Aligned_cols=130 Identities=19% Similarity=0.134 Sum_probs=109.2
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCccc--------------CCCChhHHHHHHcCCHHHHHHHHHcCCCCcc
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 598 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d--------------~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~ 598 (917)
..+.||||.|+..++.. +++.|++ |+++|..+ ..|.||||+|+..|+.+++++|+++|+|+|.
T Consensus 126 ~~G~TpLhlAa~~~~~e--iVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 126 TPGITALHLAAHRQNYE--IVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT 203 (743)
T ss_pred CCCCcHHHHHHHhCCHH--HHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh
Confidence 45889999999999987 7888888 99998643 3599999999999999999999999999999
Q ss_pred cCCCCCcHHHHHHHcC---------CHHHHHHHHhcCCCCCCCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 599 RDKYGWTALHWAAYYG---------REKMVVDLLSAGAKPNLVT-DPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 599 ~D~~G~TpLH~Aa~~G---------~~eiv~~LL~~GAd~n~~t-dp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
+|..|+||||+|+..+ ...+.++++..++...... --++.|..|.||||+|+..|+.+++++|++.+
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~ 280 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK 280 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence 9999999999999987 3446677777766653200 00337899999999999999999999999964
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=3.6e-12 Score=105.02 Aligned_cols=55 Identities=40% Similarity=0.643 Sum_probs=24.9
Q ss_pred HHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002479 589 FSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (917)
Q Consensus 589 LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA 649 (917)
||++| +++|.+|..|.||||+||..|+.++|++|+..|+++++ +|..|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence 45556 67777777777777777777777777777777777766 667777777765
No 78
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.27 E-value=4e-11 Score=112.44 Aligned_cols=100 Identities=26% Similarity=0.310 Sum_probs=92.2
Q ss_pred cccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCc
Q 002479 565 EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLN 644 (917)
Q Consensus 565 ~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~T 644 (917)
..|..|.||||+|+..|+.+++++|+..|.+++.+|..|.||||+|+..+..+++++|+..|++++. .+..|.|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~ 75 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNT 75 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCC
Confidence 3567899999999999999999999999999999999999999999999999999999999987776 7789999
Q ss_pred HHHHHHHcCcHHHHHHHHHhcccccc
Q 002479 645 AADIASKKGFDGLAAFLSEQALVAQF 670 (917)
Q Consensus 645 pL~lA~~~g~~~iv~~Ll~~Ga~~~l 670 (917)
|+|+|+..++.+++++|+.+|.+...
T Consensus 76 ~l~~a~~~~~~~~~~~L~~~~~~~~~ 101 (126)
T cd00204 76 PLHLAARNGNLDVVKLLLKHGADVNA 101 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 99999999999999999999854433
No 79
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.24 E-value=1.4e-11 Score=100.53 Aligned_cols=54 Identities=31% Similarity=0.374 Sum_probs=38.3
Q ss_pred CChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 002479 570 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 623 (917)
Q Consensus 570 G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL 623 (917)
|+||||+||..|+.+++++|++.|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 677888888888888888888778888888888888888888888888887775
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.23 E-value=2.6e-11 Score=106.82 Aligned_cols=92 Identities=21% Similarity=0.146 Sum_probs=85.2
Q ss_pred hhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 002479 572 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 651 (917)
Q Consensus 572 T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~ 651 (917)
--+.|+..+|..+-|+-.+..|.+||..- .|+||||+|+-+|..+++++|+..||+++. +|+.|-|||--|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHH
Confidence 34678999999999999999998888764 899999999999999999999999999998 89999999999999
Q ss_pred cCcHHHHHHHHHhcccccc
Q 002479 652 KGFDGLAAFLSEQALVAQF 670 (917)
Q Consensus 652 ~g~~~iv~~Ll~~Ga~~~l 670 (917)
.||..|+++|+..|++..+
T Consensus 77 EGH~~cVklLL~~GAdrt~ 95 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADRTI 95 (117)
T ss_pred HhhHHHHHHHHHcCcccce
Confidence 9999999999999988644
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.22 E-value=3.2e-11 Score=147.23 Aligned_cols=105 Identities=19% Similarity=0.143 Sum_probs=91.7
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 002479 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ 616 (917)
..|+.++..|+.. .++.|+. |+++|..|..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~--~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAV--GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 4588899999877 5677766 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-------CCCCCCCCCCCCCCCCCCcHHHHHH
Q 002479 617 KMVVDLLSA-------GAKPNLVTDPTSQNPGGLNAADIAS 650 (917)
Q Consensus 617 eiv~~LL~~-------GAd~n~~tdp~~~d~~G~TpL~lA~ 650 (917)
+++++|+.+ |++++. .+..|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~------~~~~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKP------DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCc------cccCCCCccchhh
Confidence 999999998 565554 7777887776554
No 82
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.22 E-value=3.8e-11 Score=146.52 Aligned_cols=96 Identities=26% Similarity=0.316 Sum_probs=88.9
Q ss_pred hhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 002479 572 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 651 (917)
Q Consensus 572 T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~ 651 (917)
+.||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999999999998 88999999999999
Q ss_pred cCcHHHHHHHHHh-------ccccccccc
Q 002479 652 KGFDGLAAFLSEQ-------ALVAQFNDM 673 (917)
Q Consensus 652 ~g~~~iv~~Ll~~-------Ga~~~l~~~ 673 (917)
.|+.+++++|+++ |++....+.
T Consensus 158 ~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~ 186 (664)
T PTZ00322 158 NGFREVVQLLSRHSQCHFELGANAKPDSF 186 (664)
T ss_pred CCcHHHHHHHHhCCCcccccCCCCCcccc
Confidence 9999999999999 555544443
No 83
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.21 E-value=1.4e-11 Score=142.89 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=115.1
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc--C------------CCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Q 002479 538 DSFFELTLKSKLKEWLLERVVE--G------------SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYG 603 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~--g------------advn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G 603 (917)
.-|..|+..++.. .+.++++ + .+.|..|.+|.|+||.||..|+..++++|+++.+-++..|..|
T Consensus 5 qel~~a~ka~d~~--tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg 82 (854)
T KOG0507|consen 5 QELIDACKAGDYD--TVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG 82 (854)
T ss_pred hhHHHhhhcccHH--HHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC
Confidence 4567777777766 3444443 1 1456788899999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccccccc
Q 002479 604 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 678 (917)
Q Consensus 604 ~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~ 678 (917)
.+|||+|+..|+.++|++|+..+..+|+ .+..|.||||+|+.+||.+++.+|+.+|+++-+.+-.....
T Consensus 83 ~~plhlaaw~g~~e~vkmll~q~d~~na------~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ 151 (854)
T KOG0507|consen 83 ILPLHLAAWNGNLEIVKMLLLQTDILNA------VNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETV 151 (854)
T ss_pred cceEEehhhcCcchHHHHHHhcccCCCc------ccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccH
Confidence 9999999999999999999999988887 77899999999999999999999999999998777666553
No 84
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.20 E-value=6.2e-11 Score=139.39 Aligned_cols=123 Identities=19% Similarity=0.184 Sum_probs=110.3
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHc-CCCCCcc--------cC---------------CCChhHHHHHHcCCHHHHHHHHH
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEY--------DV---------------HGQGVIHLCAMLGYTWAILLFSW 591 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~--------d~---------------~G~T~LHlAa~~G~~~~v~~LL~ 591 (917)
|.++||.|..+.+.. ++.+|+. |||++.+ +. -|..||-+||..+..+++++|++
T Consensus 184 GqSaLHiAIv~~~~~--~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAE--LVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred CcchHHHHHHhccHH--HHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 779999999999987 7888888 9998842 11 26789999999999999999999
Q ss_pred cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 002479 592 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (917)
Q Consensus 592 ~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~ 664 (917)
+|||+|.+|.+|+|.||..+.+-..++..+++++|++. +..++|..|.|||.+|+..|..++.+.+++.
T Consensus 262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~----l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA----LEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc----cccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999999999999999999998999999999999991 2234899999999999999999999999998
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.19 E-value=1.7e-11 Score=100.99 Aligned_cols=51 Identities=29% Similarity=0.398 Sum_probs=33.6
Q ss_pred C-CCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 002479 560 G-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (917)
Q Consensus 560 g-advn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~A 610 (917)
| +++|..|..|.||||+||..|+.++|++|+..|++++.+|..|+||||+|
T Consensus 5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 5 88999999999999999999999999999999999999999999999997
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.12 E-value=1.2e-10 Score=95.02 Aligned_cols=54 Identities=39% Similarity=0.510 Sum_probs=46.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 002479 603 GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 662 (917)
Q Consensus 603 G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll 662 (917)
|+||||+||..|+.+++++|++.|++++. +|..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 78999999999999999999999999988 7899999999999999999999986
No 87
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.11 E-value=2.1e-10 Score=134.99 Aligned_cols=132 Identities=19% Similarity=0.220 Sum_probs=108.4
Q ss_pred CccccHHHHHHHcCC--cHHHHHHHHHc--CCCCCc----ccCCCChhHHHHHHcCCHHHHHHHHHcCCCCccc------
Q 002479 534 PEAKDSFFELTLKSK--LKEWLLERVVE--GSKTTE----YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------ 599 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~--l~~~lv~~Ll~--gadvn~----~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~------ 599 (917)
..|+|.||.++++.. ..+ ++..|++ ..-+|. -...|+||||+|..+-+.++|.+|++.||||+.+
T Consensus 141 a~GET~Lh~~lL~~~~~~n~-la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF 219 (782)
T KOG3676|consen 141 ATGETLLHKALLNLSDGHNE-LARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFF 219 (782)
T ss_pred chhhhHHHHHHhcCchhHHH-HHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcccc
Confidence 347789999888533 323 5555554 212222 2357999999999999999999999999999975
Q ss_pred ---C--------------CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 002479 600 ---D--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 662 (917)
Q Consensus 600 ---D--------------~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll 662 (917)
| ..|..||.+||..++.+|+++|+++|||+++ +|..|+|.||+.+..-..++-.+++
T Consensus 220 ~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 220 CPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA------QDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred CcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 2478999999999999999999999999998 9999999999999998899999999
Q ss_pred Hhccc--ccccc
Q 002479 663 EQALV--AQFND 672 (917)
Q Consensus 663 ~~Ga~--~~l~~ 672 (917)
++|++ .++.|
T Consensus 294 ~~ga~~l~~v~N 305 (782)
T KOG3676|consen 294 ELGANALEHVRN 305 (782)
T ss_pred hcCCCccccccc
Confidence 99999 55544
No 88
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.10 E-value=9.3e-10 Score=113.90 Aligned_cols=106 Identities=26% Similarity=0.272 Sum_probs=96.1
Q ss_pred CCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC-----HHHHHHHHhcCC---CCCCCC
Q 002479 562 KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR-----EKMVVDLLSAGA---KPNLVT 633 (917)
Q Consensus 562 dvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~-----~eiv~~LL~~GA---d~n~~t 633 (917)
..+..+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+ .+++++|++.|+ +.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~-- 142 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL-- 142 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc--
Confidence 344567779999999999999999999999999999999999999999999999 999999999999 3333
Q ss_pred CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccc
Q 002479 634 DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (917)
Q Consensus 634 dp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~ 673 (917)
+|..|.||||+|+..|+.+++++|++.|++....+.
T Consensus 143 ----~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~ 178 (235)
T COG0666 143 ----RDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNS 178 (235)
T ss_pred ----cCCCCCchhHHHHHcCchHHHHHHHhcCCCCccccc
Confidence 799999999999999999999999999988766633
No 89
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=4.1e-10 Score=125.50 Aligned_cols=89 Identities=20% Similarity=0.124 Sum_probs=83.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcC
Q 002479 574 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 653 (917)
Q Consensus 574 LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g 653 (917)
|.-|+..|-.++|+-++..-.|+...+..|-||||-|+..||.+||++||..|+|+|+ .|.+||||||+|+.++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCN 627 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcC
Confidence 3448889999999999988889999999999999999999999999999999999999 8999999999999999
Q ss_pred cHHHHHHHHHhcccc
Q 002479 654 FDGLAAFLSEQALVA 668 (917)
Q Consensus 654 ~~~iv~~Ll~~Ga~~ 668 (917)
+..+++.|+++|+..
T Consensus 628 nv~~ckqLVe~Gaav 642 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAV 642 (752)
T ss_pred chHHHHHHHhccceE
Confidence 999999999999765
No 90
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.04 E-value=4.4e-10 Score=133.30 Aligned_cols=252 Identities=17% Similarity=0.173 Sum_probs=163.6
Q ss_pred CcceEEEeCCcccceeecccCeeEEeCCCC--CCceEEEEEEeCCCCccccccccccCCC-cccccCCCcccccchhHHH
Q 002479 398 KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH--SPGLFLLYMSLDGHKPISQVLNFEYRSP-QLHAPVASSEDKSKWEEFQ 474 (917)
Q Consensus 398 ~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph--~~G~V~l~v~~~n~~~~se~~~Feyr~~-~~~~~~~~~~d~~~~~e~~ 474 (917)
.....|--|+.+..--+|..|. --.| ..|.||+.++...++ +.++..-.+.. .+....+-+.| +.+.
T Consensus 760 ~LT~acaggh~e~vellv~rga----niehrdkkgf~plImaatagh--~tvV~~llk~ha~veaQsdrtkd----t~lS 829 (2131)
T KOG4369|consen 760 NLTSACAGGHREEVELLVVRGA----NIEHRDKKGFVPLIMAATAGH--ITVVQDLLKAHADVEAQSDRTKD----TMLS 829 (2131)
T ss_pred cccccccCccHHHHHHHHHhcc----cccccccccchhhhhhcccCc--hHHHHHHHhhhhhhhhhcccccC----ceEE
Confidence 4567899999887776776664 2245 689999999986664 22322222210 01111110100 1111
Q ss_pred H-----HHHHHHHhhccccccccccCCCCCCchHHHhhhhhchhccCCCHHHHHHHhcCCC--CC----CCccccHHHHH
Q 002479 475 V-----QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKR--TS----LPEAKDSFFEL 543 (917)
Q Consensus 475 l-----~~Rl~~ll~~~~~~l~il~~~~~~~~l~e~~~~~~~i~~~~~~~~~l~~~l~~~~--~s----~~~~~t~L~~a 543 (917)
+ -.|++++|...- ..+. ..+..++..+-....++...+++.+...+ +. ..-+-.||+.+
T Consensus 830 lacsggr~~vvelLl~~g------anke----hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmla 899 (2131)
T KOG4369|consen 830 LACSGGRTRVVELLLNAG------ANKE----HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLA 899 (2131)
T ss_pred EecCCCcchHHHHHHHhh------cccc----ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhh
Confidence 1 135555542211 1111 22333445555555688888888875444 22 22356899999
Q ss_pred HHcCCcHHHHHHHHHc-CCCCCc-ccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHH
Q 002479 544 TLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVD 621 (917)
Q Consensus 544 a~~~~l~~~lv~~Ll~-gadvn~-~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~ 621 (917)
.+.++-.. ...|++ |.|+|. ...+-+|+|-+|+..|+.++|.+||.+.+++..+-+.|.|||+-++..|.+++-.+
T Consensus 900 tmngh~~a--t~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~ 977 (2131)
T KOG4369|consen 900 TMNGHQAA--TLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNL 977 (2131)
T ss_pred hhccccHH--HHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchh
Confidence 99999874 334445 999997 55567899999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCC-----------------------------CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccc
Q 002479 622 LLSAGAKPNLVT-----------------------------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 622 LL~~GAd~n~~t-----------------------------dp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~ 671 (917)
||..|||+|+-- ....+|++|+|+|.+|+..|+...+.+|++++++.+..
T Consensus 978 li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~q 1056 (2131)
T KOG4369|consen 978 LIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQ 1056 (2131)
T ss_pred hhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhh
Confidence 999999999731 11134555555555555555555555555555555433
No 91
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=98.99 E-value=1e-09 Score=97.60 Aligned_cols=83 Identities=23% Similarity=0.297 Sum_probs=73.9
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCccccee-ecccCeeEEeCCCCCCceEEEEEEeCCCCcc
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 444 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~-~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~~ 444 (917)
.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+...+.. .++++.|+|.+|++.+|.+++.|..++...+
T Consensus 2 ~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~~ 77 (85)
T PF01833_consen 2 VITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQIY 77 (85)
T ss_dssp EEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEEE
T ss_pred EEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCeE
Confidence 599999999999999999999999822 25689999999999999 9999999999999999999999999886778
Q ss_pred cccccccc
Q 002479 445 SQVLNFEY 452 (917)
Q Consensus 445 se~~~Fey 452 (917)
++...|+|
T Consensus 78 ~~~~~F~Y 85 (85)
T PF01833_consen 78 SNNTSFTY 85 (85)
T ss_dssp EEEEEEEE
T ss_pred ECCeeeEC
Confidence 88888887
No 92
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.96 E-value=3.2e-09 Score=95.28 Aligned_cols=82 Identities=27% Similarity=0.372 Sum_probs=70.0
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCC-CCceEEEEEEeCCCCcc
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKPI 444 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph-~~G~V~l~v~~~n~~~~ 444 (917)
.|++|+|..|+..|||+|+|.|.+|.. .....|+||+.+....-+++..|.|.+|++ .+|.++|.|..++. ..
T Consensus 2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~-~~ 75 (85)
T cd01179 2 SITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGA-RR 75 (85)
T ss_pred eeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCc-cc
Confidence 699999999999999999999999965 345899999998777667899999999998 57899999999776 34
Q ss_pred ccccccccC
Q 002479 445 SQVLNFEYR 453 (917)
Q Consensus 445 se~~~Feyr 453 (917)
+....|+|.
T Consensus 76 ~~~~~F~Y~ 84 (85)
T cd01179 76 LAPLVFTYT 84 (85)
T ss_pred CCCccEEEe
Confidence 446788885
No 93
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.86 E-value=1.2e-09 Score=129.70 Aligned_cols=128 Identities=20% Similarity=0.189 Sum_probs=111.3
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCcHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALHWAA 611 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~-D~~G~TpLH~Aa 611 (917)
.+.+++|-.+|..++-+ ++++|+. |+++..+|+.|.+||.+|+-.||..+|+.|+.+.++|+.+ |+.+.|+|.+||
T Consensus 755 ~n~~t~LT~acaggh~e--~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHRE--EVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred ccccccccccccCccHH--HHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 34568888888888866 6777776 9999999999999999999999999999999999999875 778999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccc
Q 002479 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~ 669 (917)
..|+.++|++||.+||+-.. ++-...|||.+|..-|+.+|+.+|+.+|+..+
T Consensus 833 sggr~~vvelLl~~gankeh------rnvsDytPlsla~Sggy~~iI~~llS~GseIn 884 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKEH------RNVSDYTPLSLARSGGYTKIIHALLSSGSEIN 884 (2131)
T ss_pred CCCcchHHHHHHHhhccccc------cchhhcCchhhhcCcchHHHHHHHhhcccccc
Confidence 99999999999999998766 77788999999999999999999999995543
No 94
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.85 E-value=1.2e-08 Score=91.75 Aligned_cols=83 Identities=24% Similarity=0.265 Sum_probs=69.6
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEe-CCcccceeecccCeeEEeCCCCCC---ceEEEEEEeCCC
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-GEVRVPAEFVQAGVYRCFLPPHSP---GLFLLYMSLDGH 441 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~F-G~~~Vpa~~i~~gvlrC~~Pph~~---G~V~l~v~~~n~ 441 (917)
.|+.|+|.+|+..||++|+|.|.+|.. ...+.|+| |+.......+.+..|.|.+|++.. |.|.+.|...+.
T Consensus 2 ~I~~i~P~~g~~~GGt~itI~G~~f~~-----~~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (89)
T cd00102 2 VITSISPSSGPVSGGTEVTITGSNFGS-----GSNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG 76 (89)
T ss_pred EEeEEECCcCCCCCCeEEEEEEECCCC-----CCcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence 599999999999999999999999865 22699999 898877777889999999999843 888888877653
Q ss_pred CccccccccccC
Q 002479 442 KPISQVLNFEYR 453 (917)
Q Consensus 442 ~~~se~~~Feyr 453 (917)
...+....|+|.
T Consensus 77 ~~~~~~~~F~Y~ 88 (89)
T cd00102 77 GITSSPLTFTYV 88 (89)
T ss_pred cccCCCccEEee
Confidence 356777888884
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.82 E-value=1.8e-08 Score=112.02 Aligned_cols=97 Identities=27% Similarity=0.220 Sum_probs=88.4
Q ss_pred CCcccCCCChh------HHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 002479 563 TTEYDVHGQGV------IHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDP 635 (917)
Q Consensus 563 vn~~d~~G~T~------LHlAa~~G~~~~v~~LL~~Gadin~~D~~-G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp 635 (917)
...+|.+|.|. ||-+++.|+.+..--||..||++|+.+.. |.||||.|+..|+..-+++|+-+|||+++
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a---- 195 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA---- 195 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC----
Confidence 44567777665 89999999999999999999999998865 99999999999999999999999999998
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 636 TSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 636 ~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
.|.+|.||+++|...||.++++-|++..
T Consensus 196 --~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 196 --QDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred --CCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 8999999999999999999999998765
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.76 E-value=2.1e-08 Score=105.11 Aligned_cols=101 Identities=21% Similarity=0.100 Sum_probs=90.3
Q ss_pred CChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002479 570 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (917)
Q Consensus 570 G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA 649 (917)
-..+|.-+...|..+....||+.--++|.+|..|.|+|..|+..|+.++|++||+.|||+|.. ++..+.||||+|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~-----qhg~~YTpLmFA 86 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK-----QHGTLYTPLMFA 86 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc-----cccccccHHHHH
Confidence 357888899999999999999876679999999999999999999999999999999999973 678899999999
Q ss_pred HHcCcHHHHHHHHHhccccccccccc
Q 002479 650 SKKGFDGLAAFLSEQALVAQFNDMTL 675 (917)
Q Consensus 650 ~~~g~~~iv~~Ll~~Ga~~~l~~~~l 675 (917)
+..|+.++.++|++.|+...+-+.-.
T Consensus 87 ALSGn~dvcrllldaGa~~~~vNsvg 112 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARMYLVNSVG 112 (396)
T ss_pred HHcCCchHHHHHHhccCccccccchh
Confidence 99999999999999999876655433
No 97
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.71 E-value=3.9e-08 Score=110.35 Aligned_cols=121 Identities=26% Similarity=0.275 Sum_probs=109.3
Q ss_pred cHHHHHHHcCCcHHHHHHHHHcCCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHHcCC
Q 002479 538 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--LDFRDKYGWTALHWAAYYGR 615 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gad--in~~D~~G~TpLH~Aa~~G~ 615 (917)
..++.+++.+++.. +.+.-..|.++-..+.+-.+.||+|+..|+-++|++||++|-. ++..|..|.|+||-|+..++
T Consensus 868 eeil~av~~~D~~k-lqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMK-LQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHHHhccHHH-HHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 45889999999876 5666566888888999999999999999999999999999854 67888999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 616 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 616 ~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
..+..+|++.||.+.. .|..|.||-.-|-..|..+++.||....
T Consensus 947 r~vc~~lvdagasl~k------td~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRK------TDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred hHHHHHHHhcchhhee------cccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 9999999999999887 7899999999999999999999998765
No 98
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.70 E-value=7.7e-09 Score=120.54 Aligned_cols=83 Identities=25% Similarity=0.360 Sum_probs=78.7
Q ss_pred CCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 002479 563 TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 641 (917)
Q Consensus 563 vn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~-G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~ 641 (917)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|.. ||||||-|..+|+++++.+||.+|+...+ +|++
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence 6779999999999999999999999999999999999986 99999999999999999999999999887 8999
Q ss_pred CCcHHHHHHH
Q 002479 642 GLNAADIASK 651 (917)
Q Consensus 642 G~TpL~lA~~ 651 (917)
|..||++-+.
T Consensus 119 glsplq~~~r 128 (1267)
T KOG0783|consen 119 GLSPLQFLSR 128 (1267)
T ss_pred CCCHHHHHhh
Confidence 9999997765
No 99
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.58 E-value=5e-08 Score=108.19 Aligned_cols=94 Identities=24% Similarity=0.221 Sum_probs=85.3
Q ss_pred cCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCcH
Q 002479 567 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNA 645 (917)
Q Consensus 567 d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~-~GAd~n~~tdp~~~d~~G~Tp 645 (917)
+.++...+++||..|....++-+.-.|.|++.+|.+.+|+||.||..|+++++++|++ .+.+++. +|..|+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~------kDRw~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDP------KDRWGRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCCh------hhccCCCc
Confidence 3467788999999999999999888999999999999999999999999999999998 5666665 99999999
Q ss_pred HHHHHHcCcHHHHHHHHHhcc
Q 002479 646 ADIASKKGFDGLAAFLSEQAL 666 (917)
Q Consensus 646 L~lA~~~g~~~iv~~Ll~~Ga 666 (917)
|+-|...+|.+++++|.+..-
T Consensus 577 lDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred chHhHhcCcHHHHHHHHHHhc
Confidence 999999999999999988753
No 100
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.53 E-value=4.3e-07 Score=82.15 Aligned_cols=84 Identities=21% Similarity=0.254 Sum_probs=63.9
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCC-CCceEEEEEEeCCCC--
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHK-- 442 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph-~~G~V~l~v~~~n~~-- 442 (917)
.|+.|+|.+|+..|||.|+|.|.+|..- .....|.||+.+.....+.+..|.|.+|+. .+|..++.|.-++..
T Consensus 2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~~ 77 (90)
T cd00603 2 VITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANVS 77 (90)
T ss_pred eEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCcccc
Confidence 6999999999999999999999988651 246899999998777777899999999998 342344444444442
Q ss_pred -ccccccccccC
Q 002479 443 -PISQVLNFEYR 453 (917)
Q Consensus 443 -~~se~~~Feyr 453 (917)
..+....|.|.
T Consensus 78 ~~~~~~~~F~Y~ 89 (90)
T cd00603 78 ARVLSNTTFTYV 89 (90)
T ss_pred ccccCCcceEEe
Confidence 24556667763
No 101
>PF13606 Ank_3: Ankyrin repeat
Probab=98.50 E-value=1.3e-07 Score=67.43 Aligned_cols=30 Identities=43% Similarity=0.442 Sum_probs=24.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 002479 602 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 631 (917)
Q Consensus 602 ~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~ 631 (917)
+|+||||+||..|+.++|++||++|+|+|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 578888888888888888888888888763
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.42 E-value=4.4e-07 Score=102.90 Aligned_cols=94 Identities=24% Similarity=0.348 Sum_probs=74.8
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHcCCC--CCc--ccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVEGSK--TTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~gad--vn~--~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
....|+.|....++.. ++-+|..|.. +|. -+.+|+|+||+||..|+..+.++|+++|+|+-.+|.+|+|||.||-
T Consensus 624 lgqqLl~A~~~~Dl~t-~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 624 LGQQLLRAVAAEDLQT-AILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence 4467788888887764 3333333442 333 4567899999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCC
Q 002479 612 YYGREKMVVDLLSAGAKPN 630 (917)
Q Consensus 612 ~~G~~eiv~~LL~~GAd~n 630 (917)
..|..+|+.+|+.+|+-..
T Consensus 703 ~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hcccHHHHHHHHHcCCCcc
Confidence 9999999999999997543
No 103
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.41 E-value=1e-06 Score=80.55 Aligned_cols=86 Identities=14% Similarity=0.070 Sum_probs=65.3
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccce---eecccCeeEEeCCCCC-C-ceEEEEEEeCC
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPA---EFVQAGVYRCFLPPHS-P-GLFLLYMSLDG 440 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa---~~i~~gvlrC~~Pph~-~-G~V~l~v~~~n 440 (917)
.|++|+|..|+..|||+|+|+|.+|....+ .....+++|+.+-.. .......|+|.+||+. + +..++.|..++
T Consensus 2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~ 79 (94)
T cd01180 2 VITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH 79 (94)
T ss_pred eeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence 599999999999999999999999876211 235789999975222 2566789999999984 3 77788888766
Q ss_pred CC-ccccccccccC
Q 002479 441 HK-PISQVLNFEYR 453 (917)
Q Consensus 441 ~~-~~se~~~Feyr 453 (917)
.. .++....|.|.
T Consensus 80 ~~~~~~~~~~F~Y~ 93 (94)
T cd01180 80 GSFRTESSEGFSFV 93 (94)
T ss_pred ceecccccCceEEe
Confidence 53 35556778775
No 104
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.41 E-value=8.6e-07 Score=80.12 Aligned_cols=83 Identities=25% Similarity=0.296 Sum_probs=64.0
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeec--ccCeeEEeCCCC--CCceEEE-EEEeC
Q 002479 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFV--QAGVYRCFLPPH--SPGLFLL-YMSLD 439 (917)
Q Consensus 365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i--~~gvlrC~~Pph--~~G~V~l-~v~~~ 439 (917)
..|+.|+|.+|+..|||+|+|+|.+|.. .....|.|+...++..++ .+..|.|.+|+. .++.+++ .+...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 4699999999999999999999999876 556778887766677765 578999999987 4677777 67766
Q ss_pred CCCcccccccccc
Q 002479 440 GHKPISQVLNFEY 452 (917)
Q Consensus 440 n~~~~se~~~Fey 452 (917)
+...-++...|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 6544343345665
No 105
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.34 E-value=4.3e-07 Score=100.95 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=84.5
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHcCCCCCcccCCCChhHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHc
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAAYY 613 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~-~Gadin~~D~~G~TpLH~Aa~~ 613 (917)
+...++++|+..|++.. +..+++.|.|++..|.+.+|+||.||..|+.+++++||. .+++++.+|.+|+|||--|..+
T Consensus 505 ~~~i~~~~aa~~GD~~a-lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSA-LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHH-HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 34568999999999986 777777899999999999999999999999999999995 5899999999999999999999
Q ss_pred CCHHHHHHHHhcCCCC
Q 002479 614 GREKMVVDLLSAGAKP 629 (917)
Q Consensus 614 G~~eiv~~LL~~GAd~ 629 (917)
+|.+++++|-++-...
T Consensus 584 ~h~~v~k~L~~~~~~y 599 (622)
T KOG0506|consen 584 KHKEVVKLLEEAQYPY 599 (622)
T ss_pred CcHHHHHHHHHHhccc
Confidence 9999999998865433
No 106
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.32 E-value=1.1e-06 Score=99.62 Aligned_cols=88 Identities=19% Similarity=0.308 Sum_probs=72.9
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 002479 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ 616 (917)
-++|.++...+....-.+++.+ +..++..|..|.||||+|+.+|+..++..|+.+|+++-.+|+.||+|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 3577777777766522223333 667888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 002479 617 KMVVDLLSA 625 (917)
Q Consensus 617 eiv~~LL~~ 625 (917)
.++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 888777653
No 107
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.29 E-value=9.2e-07 Score=64.48 Aligned_cols=30 Identities=43% Similarity=0.474 Sum_probs=22.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 002479 602 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 631 (917)
Q Consensus 602 ~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~ 631 (917)
+|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 477777777777777777777777777776
No 108
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.27 E-value=2.3e-06 Score=95.67 Aligned_cols=87 Identities=17% Similarity=0.244 Sum_probs=74.6
Q ss_pred cHHHHHHHcCCcHHHHHHHHHcCCCCCccc-CCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 002479 538 DSFFELTLKSKLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (917)
Q Consensus 538 t~L~~aa~~~~l~~~lv~~Ll~gadvn~~d-~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ 616 (917)
..||..+..++++. -+.+|..|+++|..+ +.|.||||.||..|...-+++|+-+|||++..|.+|.||+.+|-..||.
T Consensus 135 rQLhasvRt~nlet-~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 135 KQLHSSVRTGNLET-CLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHhhcccHHH-HHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence 56777777777774 344444599999854 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 002479 617 KMVVDLLSA 625 (917)
Q Consensus 617 eiv~~LL~~ 625 (917)
+++.-|++.
T Consensus 214 ~laeRl~e~ 222 (669)
T KOG0818|consen 214 ELAERLVEI 222 (669)
T ss_pred HHHHHHHHH
Confidence 988877653
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.26 E-value=2e-06 Score=97.59 Aligned_cols=87 Identities=24% Similarity=0.242 Sum_probs=74.5
Q ss_pred hhHHHHHHcCCHHHHHH-HH-HcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002479 572 GVIHLCAMLGYTWAILL-FS-WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (917)
Q Consensus 572 T~LHlAa~~G~~~~v~~-LL-~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA 649 (917)
-|||+++......-+.. |. ..+..|+.+|..|.||||+|+..||.+.++.|+.+||++.. +|..|++|||-|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence 45999988776554443 33 45678999999999999999999999999999999999988 999999999999
Q ss_pred HHcCcHHHHHHHHHh
Q 002479 650 SKKGFDGLAAFLSEQ 664 (917)
Q Consensus 650 ~~~g~~~iv~~Ll~~ 664 (917)
+..|+..++..++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999887766654
No 110
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.20 E-value=6.6e-06 Score=100.17 Aligned_cols=84 Identities=27% Similarity=0.305 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHHhhhhhhhhhHHhhcCChHHHHHHHHHHHHHHHHHHhHHHHH---hHHHHHHHHHHHHhHHHHHHHHHH
Q 002479 713 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNM 789 (917)
Q Consensus 713 ~~~Aa~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rr---~~~aai~IQs~~Rg~~~R~~~~~~ 789 (917)
...+++.||+.+|++..|++|..++ .+++.||..+||+..|+ +..||+.||+.+|++..|+.|...
T Consensus 672 l~~~~~~iq~~~r~~~~r~~f~~~r-----------~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~ 740 (862)
T KOG0160|consen 672 LSAAKVLIQRQIRGYLARKKFLQLR-----------SAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL 740 (862)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4567778999999999999998877 99999999999999998 777999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002479 790 RRQAIKIQAAFRGFQVRK 807 (917)
Q Consensus 790 r~aai~IQa~~Rg~~~Rk 807 (917)
+.+++.||+.+|++..|.
T Consensus 741 ~~~~~~~qs~~r~~~~r~ 758 (862)
T KOG0160|consen 741 IPASITIQSGVRAMLARN 758 (862)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999999987
No 111
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.19 E-value=1.9e-06 Score=62.83 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCChhHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 002479 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK 601 (917)
Q Consensus 569 ~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~ 601 (917)
+|.||||+||..|+.+++++||.+|+++|.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 112
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.19 E-value=3.3e-06 Score=95.97 Aligned_cols=91 Identities=19% Similarity=0.111 Sum_probs=77.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCCC--Cc--ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHH
Q 002479 574 IHLCAMLGYTWAILLFSWSGLS--LD--FRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (917)
Q Consensus 574 LHlAa~~G~~~~v~~LL~~Gad--in--~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA 649 (917)
|.-|........+-+||.+|.. +| .-+.+|+||||+||..|+..+.++|+=+|+|+.+ .|..|.|||.+|
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~ya 701 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYA 701 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhH
Confidence 3345555667777888888843 33 3456789999999999999999999999999988 899999999999
Q ss_pred HHcCcHHHHHHHHHhcccccc
Q 002479 650 SKKGFDGLAAFLSEQALVAQF 670 (917)
Q Consensus 650 ~~~g~~~iv~~Ll~~Ga~~~l 670 (917)
...|.-+|+.+|+.+|+.+..
T Consensus 702 r~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hhcccHHHHHHHHHcCCCccc
Confidence 999999999999999987643
No 113
>PF13606 Ank_3: Ankyrin repeat
Probab=98.18 E-value=1.8e-06 Score=61.58 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=28.4
Q ss_pred CCChhHHHHHHcCCHHHHHHHHHcCCCCcc
Q 002479 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDF 598 (917)
Q Consensus 569 ~G~T~LHlAa~~G~~~~v~~LL~~Gadin~ 598 (917)
+|+||||+||..|+.++|++||++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 114
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.12 E-value=2.1e-05 Score=95.91 Aligned_cols=81 Identities=25% Similarity=0.240 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHhHHHHHhHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 747 NIIAALKIQHAFRNFEVRKKMA----AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKA 822 (917)
Q Consensus 747 ~~~Aa~~IQ~~~R~~~~rr~~~----aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~ 822 (917)
...+++.||+.+|+|..|+.+. +++.||+.+||+.+|+... ...+++.||+.||++..|++|+.++.+++.+|+.
T Consensus 672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~ 750 (862)
T KOG0160|consen 672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSG 750 (862)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888888888888754 7788888888888887333 4457888888888888888888888888888888
Q ss_pred HHHHHH
Q 002479 823 ILRWRL 828 (917)
Q Consensus 823 iR~~r~ 828 (917)
+|++..
T Consensus 751 ~r~~~~ 756 (862)
T KOG0160|consen 751 VRAMLA 756 (862)
T ss_pred HHHHHh
Confidence 888833
No 115
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.08 E-value=1.6e-05 Score=70.55 Aligned_cols=79 Identities=14% Similarity=0.058 Sum_probs=66.8
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCCCCceEEEEEEeCCCCcc
Q 002479 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 444 (917)
Q Consensus 365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~~ 444 (917)
..|..++|.-|.. |++|+|.|+.|.+ ..-.++||+.+++...|+|..|.|.+|.+.+|..++.|...++. -
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~-~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGS------APGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGA-T 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCC------CCcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCc-c
Confidence 4699999999987 8899999998864 13578999999998899999999999999999999999987663 4
Q ss_pred cccccccc
Q 002479 445 SQVLNFEY 452 (917)
Q Consensus 445 se~~~Fey 452 (917)
|+...|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 66665654
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.08 E-value=3.7e-06 Score=103.08 Aligned_cols=100 Identities=26% Similarity=0.299 Sum_probs=87.9
Q ss_pred cCCCCCc--ccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Q 002479 559 EGSKTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPT 636 (917)
Q Consensus 559 ~gadvn~--~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~ 636 (917)
.++++|. .-..|.|+||.|+..|..-++++|+..|+++|..|..|.||||.+...|+...+.+|+++||+.++
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a----- 717 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA----- 717 (785)
T ss_pred chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc-----
Confidence 3555554 335789999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 002479 637 SQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (917)
Q Consensus 637 ~~d~~G~TpL~lA~~~g~~~iv~~Ll~~ 664 (917)
.+.+|.+|+++|....+.+++-+|.-.
T Consensus 718 -~~~~~~~~l~~a~~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 718 -FDPDGKLPLDIAMEAANADIVLLLRLA 744 (785)
T ss_pred -cCccCcchhhHHhhhccccHHHHHhhh
Confidence 789999999999877777776665443
No 117
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.07 E-value=1.1e-05 Score=74.41 Aligned_cols=72 Identities=25% Similarity=0.406 Sum_probs=55.4
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcc-cceeecccCeeEEeCCCCCC-------ceEEEEEE
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVR-VPAEFVQAGVYRCFLPPHSP-------GLFLLYMS 437 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~-Vpa~~i~~gvlrC~~Pph~~-------G~V~l~v~ 437 (917)
.|++|+|.||+..|||.|+|+|.+|.. +....+.++||+.. ++-.+.++..+.|..|+... +..++.+.
T Consensus 2 ~I~~i~P~~g~~SGGt~itV~G~~Lds---~q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~~ 78 (99)
T cd01181 2 TITRIEPEWSFLSGGTPITVTGTNLNT---VQEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEFG 78 (99)
T ss_pred EEEEeccCCCccCCCEEEEEEeeccCc---ccccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEEE
Confidence 699999999999999999999999965 23447889999953 45556788899999997632 45555555
Q ss_pred eCC
Q 002479 438 LDG 440 (917)
Q Consensus 438 ~~n 440 (917)
.+.
T Consensus 79 fd~ 81 (99)
T cd01181 79 LDG 81 (99)
T ss_pred Eec
Confidence 433
No 118
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.06 E-value=0.00017 Score=90.83 Aligned_cols=152 Identities=22% Similarity=0.192 Sum_probs=89.7
Q ss_pred hhHHHHh--hhHHHHHHHHHHHhhhhhhhhhHHhhcCChHHHHHHHHHHHHHHHHHHhHHHHH---hHHHHHHHHHHHHh
Q 002479 705 DTLSAYR--TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRS 779 (917)
Q Consensus 705 ~sL~a~r--~~~~Aa~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rr---~~~aai~IQs~~Rg 779 (917)
..|+..| .....+++||++|||+..|+++.... +..+++..+|..+|-+..+. ...+++.+|..||.
T Consensus 734 ~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~--------k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 805 (1463)
T COG5022 734 AALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQAL--------KRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSL 805 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHH
Confidence 4555555 34778999999999999998885433 33333444444433221111 12366777777777
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCchhH
Q 002479 780 WKVRKEFLNMRRQAIKIQ-AAFRGFQVRKQ--YGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAE 856 (917)
Q Consensus 780 ~~~R~~~~~~r~aai~IQ-a~~Rg~~~Rk~--y~~~~~aa~~IQ~~iR~~r~~r~~lr~~r~~~~~~~~~~~q~~~~~~~ 856 (917)
...|+.+...-..+..+| ..+|....|.. -.....+...+|+++|.. .+++
T Consensus 806 ~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~-~~~k------------------------- 859 (1463)
T COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSL-KAKK------------------------- 859 (1463)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh-hhhH-------------------------
Confidence 777777666666666676 55555555543 233334666666665544 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 002479 857 EDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 900 (917)
Q Consensus 857 ~~~~r~~R~q~~~~~~~A~~~IQs~~R~~~aR~qy~rlk~~~~~ 900 (917)
.+..+.+.++.+|+.+|.-.|++++..++.+..+
T Consensus 860 ----------r~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~ 893 (1463)
T COG5022 860 ----------RFSLLKKETIYLQSAQRVELAERQLQELKIDVKS 893 (1463)
T ss_pred ----------HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 2223445666677777777777777777666553
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.01 E-value=1.2e-05 Score=80.38 Aligned_cols=67 Identities=34% Similarity=0.471 Sum_probs=51.9
Q ss_pred CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhc
Q 002479 593 GLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (917)
Q Consensus 593 Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~G-Ad~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~G 665 (917)
+.+||.+|..|||||+.|+..|..+.+.+|+.+| +.+.+ .|..|.+++.+|-..|+.+++..|.+.-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHHh
Confidence 4577788888888888888888888888888887 66666 6777888888888888888887777764
No 120
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.81 E-value=7.9e-06 Score=96.15 Aligned_cols=74 Identities=26% Similarity=0.272 Sum_probs=66.9
Q ss_pred CcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHHhcccccccccc
Q 002479 596 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 674 (917)
Q Consensus 596 in~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~-~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~ 674 (917)
.|.+|..|+|+||+|+..|..++++.||.+|++++. +|. .|+||||-|...|+.+++-+|+.+|+...+.+-.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v------qD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV------QDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeee------ccccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc
Confidence 688999999999999999999999999999999998 555 5999999999999999999999999777666544
Q ss_pred c
Q 002479 675 L 675 (917)
Q Consensus 675 l 675 (917)
.
T Consensus 119 g 119 (1267)
T KOG0783|consen 119 G 119 (1267)
T ss_pred C
Confidence 3
No 121
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.72 E-value=0.00011 Score=88.23 Aligned_cols=128 Identities=13% Similarity=0.005 Sum_probs=102.7
Q ss_pred ccccHHHHHHHcCCcHHHHHHHHHc---C--CCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q 002479 535 EAKDSFFELTLKSKLKEWLLERVVE---G--SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 609 (917)
Q Consensus 535 ~~~t~L~~aa~~~~l~~~lv~~Ll~---g--advn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~ 609 (917)
.+....+.++..|+.. .+.+.++ . -++|..|.-|+++||+|..+-+.+++++|++++..+ .-+|.+
T Consensus 24 ~~e~~fL~a~E~gd~~--~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~ 94 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVP--LVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLL 94 (822)
T ss_pred hhhHHHHHHHHcCChH--HHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHH
Confidence 4556788899999987 4555444 2 467789999999999999999999999999987666 248999
Q ss_pred HHHcCCHHHHHHHHhcCCCCC----CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccc
Q 002479 610 AAYYGREKMVVDLLSAGAKPN----LVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (917)
Q Consensus 610 Aa~~G~~eiv~~LL~~GAd~n----~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~ 671 (917)
|+..|..++|++|+.+-.... ..+++.+....+.||+.+|+..++.+|+++|+.+|++.+..
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 999999999999998644331 12233446678899999999999999999999999876543
No 122
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.64 E-value=0.00022 Score=63.34 Aligned_cols=79 Identities=15% Similarity=0.091 Sum_probs=66.2
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCCCCceEEEEEEeCCCCccc
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPIS 445 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph~~G~V~l~v~~~n~~~~s 445 (917)
.|..++|.-|. -|+.|+|.|..|.+ ..-.++||+.+++...|++..|.|.+|.+.+|..++.|...++ .-|
T Consensus 2 ~I~~i~P~~g~--pG~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G-~~S 72 (81)
T cd00604 2 LIGSVGPVMGK--PGNTVTISGEGFGS------TGGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDG-VTS 72 (81)
T ss_pred eEeeEcCCCCC--CCCEEEEEEECCCC------CccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCC-ccc
Confidence 58889998776 68899999998865 1247899999998889999999999999999999999998666 357
Q ss_pred cccccccC
Q 002479 446 QVLNFEYR 453 (917)
Q Consensus 446 e~~~Feyr 453 (917)
+...|+|.
T Consensus 73 n~~~f~~l 80 (81)
T cd00604 73 NGYNFEVL 80 (81)
T ss_pred CcEeEEEc
Confidence 77778873
No 123
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.64 E-value=0.0001 Score=80.45 Aligned_cols=61 Identities=21% Similarity=0.227 Sum_probs=42.5
Q ss_pred ChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 002479 571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 631 (917)
Q Consensus 571 ~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~ 631 (917)
..-|..||+.|..+.|+.|++.|++||.+|.....||.+|+.+||..+|++||++||-...
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r 97 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR 97 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc
Confidence 3446667777777777777777777777777777777777777777777777777765543
No 124
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.63 E-value=0.0005 Score=80.48 Aligned_cols=62 Identities=19% Similarity=0.329 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 002479 768 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQ 837 (917)
Q Consensus 768 ~aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~iR~~r~~r~~lr~~r 837 (917)
.-++.||+.||||.+|.+|++++.+++.|+ +||.+ ++++++..||..+|+|++++..-+.++
T Consensus 697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~-------K~ks~v~el~~~~rg~k~~r~ygk~~~ 758 (1001)
T KOG0164|consen 697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRY-------KLKSYVQELQRRFRGAKQMRDYGKSIR 758 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-------HHHHHHHHHHHHHHhhhhccccCCCCC
Confidence 368889999999999999999999999998 88843 456778889999999966665554444
No 125
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.54 E-value=0.00015 Score=72.72 Aligned_cols=71 Identities=18% Similarity=0.166 Sum_probs=65.8
Q ss_pred CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 002479 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 630 (917)
Q Consensus 560 gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n 630 (917)
+.++|.+|..|+|+|+.||..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.-.+-.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 4689999999999999999999999999999999 9999999999999999999999999999998754443
No 126
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.52 E-value=0.00012 Score=80.02 Aligned_cols=106 Identities=21% Similarity=0.186 Sum_probs=74.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhcccccccccccccccchhh
Q 002479 604 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSL 683 (917)
Q Consensus 604 ~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l~~~i~~~~ 683 (917)
+--|..||+.|..+.|+.|++.|.++|. .|.....||.+|+..||..++++|+++|+--.-.....+-.+-|++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~------vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaL 110 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNA------VDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGAL 110 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcch------hhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhh
Confidence 3468899999999999999999999999 8899999999999999999999999999765444443333343433
Q ss_pred hcccccccccCCccchhhHHHhhHHHHhhhHHHHHHHHHHHh
Q 002479 684 QTGSTITVDTQNLTEDEVYLKDTLSAYRTAAEAAARIQAAFR 725 (917)
Q Consensus 684 ~~~~~~~~~~~~~~~~q~slk~sL~a~r~~~~Aa~~IQ~~~R 725 (917)
...... .+-.-+.+.++-....-|+.||+.+|
T Consensus 111 nd~IR~----------mllsydi~KA~d~~qP~aahi~s~l~ 142 (516)
T KOG0511|consen 111 NDRIRR----------MLLSYDILKAFDARQPPAAHIQSSLR 142 (516)
T ss_pred hHHHHH----------HHHHHHHHHHhhccCCcchHHHHHhh
Confidence 111000 01111334444455556667777666
No 127
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.12 E-value=0.0031 Score=74.11 Aligned_cols=81 Identities=16% Similarity=0.266 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhHHhhcCChHHHHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHhHHHHHHHH----
Q 002479 712 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFL---- 787 (917)
Q Consensus 712 ~~~~Aa~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rr~~~aai~IQs~~Rg~~~R~~~~---- 787 (917)
....-++.||++||||..|.+|++++ ++++.|+ +||.|. ....+..||+.+||++.++.|.
T Consensus 694 ~l~~lvtllQK~~RG~~~R~ry~rmk-----------a~~~ii~-wyR~~K---~ks~v~el~~~~rg~k~~r~ygk~~~ 758 (1001)
T KOG0164|consen 694 RLPSLVTLLQKAWRGWLARQRYRRMK-----------ASATIIR-WYRRYK---LKSYVQELQRRFRGAKQMRDYGKSIR 758 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHH-HHHHHH---HHHHHHHHHHHHHhhhhccccCCCCC
Confidence 34567889999999999999998888 7777777 888553 3347788999999999999884
Q ss_pred ------HHHHHHHHHHHHHHHHHHHH
Q 002479 788 ------NMRRQAIKIQAAFRGFQVRK 807 (917)
Q Consensus 788 ------~~r~aai~IQa~~Rg~~~Rk 807 (917)
.++.+...+|..+-.|++++
T Consensus 759 WP~pP~~Lr~~~~~L~~lf~rwra~~ 784 (1001)
T KOG0164|consen 759 WPAPPLVLREFEELLRELFIRWRAWQ 784 (1001)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 35556666666544444433
No 128
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.97 E-value=0.00078 Score=83.10 Aligned_cols=90 Identities=18% Similarity=0.091 Sum_probs=80.1
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~ 612 (917)
..+.+.||.|+..+... +.++|+. |+++|..|..|.||||.+...|+...+..|+++|++.+..|..|.+||++|..
T Consensus 654 ~~~~s~lh~a~~~~~~~--~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSG--AVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred hcccchhhhhhccchHH--HHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence 45678999999998877 6777777 99999999999999999999999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHhc
Q 002479 613 YGREKMVVDLLSA 625 (917)
Q Consensus 613 ~G~~eiv~~LL~~ 625 (917)
..+.+++-+|...
T Consensus 732 ~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 732 AANADIVLLLRLA 744 (785)
T ss_pred hccccHHHHHhhh
Confidence 8777777666544
No 129
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.94 E-value=0.0016 Score=74.29 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=78.9
Q ss_pred CccccHHHHHHHcCCcHHHHHHHHHc-CCC--CCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 002479 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSK--TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (917)
Q Consensus 534 ~~~~t~L~~aa~~~~l~~~lv~~Ll~-gad--vn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~A 610 (917)
.+..+-||+|+.-|+.. ++++++. |.. ++..|+.|.|+||-||..++-.++.+|++.|+.+...|..|.||-.-|
T Consensus 897 ~~~~sllh~a~~tg~~e--ivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~era 974 (1004)
T KOG0782|consen 897 PDHCSLLHYAAKTGNGE--IVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERA 974 (1004)
T ss_pred cchhhHHHHHHhcCChH--HHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHH
Confidence 34557889999988877 7888887 432 566889999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhc
Q 002479 611 AYYGREKMVVDLLSA 625 (917)
Q Consensus 611 a~~G~~eiv~~LL~~ 625 (917)
-..|..+++.+|-..
T Consensus 975 qqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 975 QQAGDPDLAAYLESR 989 (1004)
T ss_pred HhcCCchHHHHHhhh
Confidence 999999999998653
No 130
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.88 E-value=0.0058 Score=69.49 Aligned_cols=71 Identities=24% Similarity=0.261 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCCCccc------CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHH
Q 002479 583 TWAILLFSWSGLSLDFR------DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDG 656 (917)
Q Consensus 583 ~~~v~~LL~~Gadin~~------D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~ 656 (917)
...|++|.+++++.|+. |..--|+||+|+..|..++|.+||+.|+|+.+ +|..|.||.+++. +.+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~---nkd 474 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA---NKD 474 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc---cHH
Confidence 56788899998888764 44467999999999999999999999987766 9999999999987 445
Q ss_pred HHHHHH
Q 002479 657 LAAFLS 662 (917)
Q Consensus 657 iv~~Ll 662 (917)
+-..++
T Consensus 475 Vk~~F~ 480 (591)
T KOG2505|consen 475 VKSIFI 480 (591)
T ss_pred HHHHHH
Confidence 444333
No 131
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.86 E-value=0.0015 Score=42.59 Aligned_cols=20 Identities=45% Similarity=0.783 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002479 791 RQAIKIQAAFRGFQVRKQYG 810 (917)
Q Consensus 791 ~aai~IQa~~Rg~~~Rk~y~ 810 (917)
.+++.||++|||+++|++|+
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 45666666666666666553
No 132
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=96.68 E-value=0.026 Score=71.87 Aligned_cols=119 Identities=24% Similarity=0.232 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHH----HHHhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 744 EAQNIIAALKIQHAFRNFEVRKKMAAAARIQH----RFRSWKVRKEFLN--MRRQAIKIQAAFRGFQVRKQYGKILWSVG 817 (917)
Q Consensus 744 ~~~~~~Aa~~IQ~~~R~~~~rr~~~aai~IQs----~~Rg~~~R~~~~~--~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~ 817 (917)
...-...+..||++|||+..|+++.++..+|. ..+|++.|+.+.. .-+.++++|+.||....|+.|+.......
T Consensus 741 d~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~ 820 (1463)
T COG5022 741 DAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACII 820 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHH
Confidence 34445677888888888777777765554443 3456666654432 23477888888888888888888888888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 002479 818 VLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMK 895 (917)
Q Consensus 818 ~IQ~~iR~~r~~r~~lr~~r~~~~~~~~~~~q~~~~~~~~~~~r~~R~q~~~~~~~A~~~IQs~~R~~~aR~qy~rlk 895 (917)
.+|+-+.+.+. + +. ....+...++.+.+|+++|...+++.|..++
T Consensus 821 ~lq~~i~~~~~----~---~~--------------------------~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~ 865 (1463)
T COG5022 821 KLQKTIKREKK----L---RE--------------------------TEEVEFSLKAEVLIQKFGRSLKAKKRFSLLK 865 (1463)
T ss_pred HHHHHHHHHHH----H---hH--------------------------HHHHHHHHHHHHHHHHHHHhhhhhHHHHHhh
Confidence 88854332211 1 00 0112245678999999999999999999886
No 133
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.16 E-value=0.0084 Score=40.00 Aligned_cols=28 Identities=46% Similarity=0.492 Sum_probs=19.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 002479 603 GWTALHWAAYYGREKMVVDLLSAGAKPN 630 (917)
Q Consensus 603 G~TpLH~Aa~~G~~eiv~~LL~~GAd~n 630 (917)
|.||||+|+..|+.++++.|+..|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5677777777777777777777766543
No 134
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=95.97 E-value=0.01 Score=38.65 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHH
Q 002479 872 ERSVVRVQSMFRSKKAQEEYR 892 (917)
Q Consensus 872 ~~A~~~IQs~~R~~~aR~qy~ 892 (917)
.+|++.||+.||++.+|++|+
T Consensus 1 ~~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 368999999999999999985
No 135
>PTZ00014 myosin-A; Provisional
Probab=95.68 E-value=0.023 Score=70.96 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 792 QAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRW 826 (917)
Q Consensus 792 aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~iR~~ 826 (917)
.+..||++|||++.|++|++.+.+++.||+.||+|
T Consensus 779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~ 813 (821)
T PTZ00014 779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRH 813 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555555555
No 136
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.34 E-value=0.23 Score=63.42 Aligned_cols=145 Identities=19% Similarity=0.170 Sum_probs=92.0
Q ss_pred HHHHHHHhhhhhhhhhHHhhcCChHHHHHHHHHHHHHHHHHHhHHHHHhHH---------HHHHHHHHHHhHHHHHHHHH
Q 002479 718 ARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMA---------AAARIQHRFRSWKVRKEFLN 788 (917)
Q Consensus 718 ~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rr~~~---------aai~IQs~~Rg~~~R~~~~~ 788 (917)
.+-++.+|+.+.+....-+ ..+..-....-+..|...|+...+.... -..++|+..||+..|.++..
T Consensus 481 ~k~~~~~~~~l~~~~~~~~----~ee~~~~~~~~is~q~~v~~i~~~~~l~~~~~s~~~s~~~~~qa~~rg~~~r~~~~~ 556 (1401)
T KOG2128|consen 481 MKWLAYIYGNLVREAKKWL----LEELHFEYSSLISLQALVRGIVLRSALFSLYPSLGKSEKLRIQASERGFSTRNKFRS 556 (1401)
T ss_pred hhhHHHhhhhhhhhhhccc----cHHHHHHHHHHhhHHHHhhhhHHHhhHHHHhhhhccccchhhhhhccccchHHHHHh
Confidence 4667777777777543222 2233333334444666666655544211 23445999999988887755
Q ss_pred HHH-------HHHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCchhHH
Q 002479 789 MRR-------QAIKIQAAFRGFQV---RK-QYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEE 857 (917)
Q Consensus 789 ~r~-------aai~IQa~~Rg~~~---Rk-~y~~~~~aa~~IQ~~iR~~r~~r~~lr~~r~~~~~~~~~~~q~~~~~~~~ 857 (917)
... .+..||+.|||+.. +. ........++.+|+..|+...+.++.+
T Consensus 557 ~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~----------------------- 613 (1401)
T KOG2128|consen 557 RLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSR----------------------- 613 (1401)
T ss_pred hhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHH-----------------------
Confidence 432 78889999999985 11 112223378899999998843333321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 002479 858 DFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMK 895 (917)
Q Consensus 858 ~~~r~~R~q~~~~~~~A~~~IQs~~R~~~aR~qy~rlk 895 (917)
+.+.+.....+++.||+.+|...+|..|+.+.
T Consensus 614 ------~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~ 645 (1401)
T KOG2128|consen 614 ------KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLF 645 (1401)
T ss_pred ------HHHHHHHhhhhHHHHHHHHHhcccchHHHHHh
Confidence 22334456678899999999999999999883
No 137
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=95.15 E-value=0.025 Score=38.86 Aligned_cols=21 Identities=57% Similarity=0.868 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002479 790 RRQAIKIQAAFRGFQVRKQYG 810 (917)
Q Consensus 790 r~aai~IQa~~Rg~~~Rk~y~ 810 (917)
..++++||+.|||+++|++|+
T Consensus 3 ~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 3 TRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 456778888888888887773
No 138
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.12 E-value=0.055 Score=67.97 Aligned_cols=87 Identities=17% Similarity=0.138 Sum_probs=73.8
Q ss_pred CccceeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCc-ccceeecccCe-eEEeCCCCC-CceEEEEEEe
Q 002479 362 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGV-YRCFLPPHS-PGLFLLYMSL 438 (917)
Q Consensus 362 ~~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~-~Vpa~~i~~gv-lrC~~Pph~-~G~V~l~v~~ 438 (917)
=|-+.|..+.|.||+..|||.|+++|+.+.. .+.-.|++|.. +-+....+++. ++|..++-. ++.-|+.|..
T Consensus 140 ~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~f 214 (1025)
T KOG3610|consen 140 LQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVSF 214 (1025)
T ss_pred ecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEEe
Confidence 4567899999999999999999999998865 57899999998 77888888886 999999884 5788888888
Q ss_pred CCCCcccc-ccccccCC
Q 002479 439 DGHKPISQ-VLNFEYRS 454 (917)
Q Consensus 439 ~n~~~~se-~~~Feyr~ 454 (917)
+... +.. ...|+|..
T Consensus 215 ~~~~-~~~~~~~f~y~~ 230 (1025)
T KOG3610|consen 215 DRTP-QKLTPLAFNYTA 230 (1025)
T ss_pred cccc-cccCCCCccccc
Confidence 7664 444 68889987
No 139
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.03 E-value=0.035 Score=36.81 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=26.4
Q ss_pred CCChhHHHHHHcCCHHHHHHHHHcCCCCc
Q 002479 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLD 597 (917)
Q Consensus 569 ~G~T~LHlAa~~G~~~~v~~LL~~Gadin 597 (917)
.|.||||+|+..|..++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998775
No 140
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=94.91 E-value=0.075 Score=67.56 Aligned_cols=92 Identities=24% Similarity=0.242 Sum_probs=62.3
Q ss_pred HHHHHHHhhhhhhhhhHHhhcCChHHHH-HHHHHHHHHHHHHHhHHH--HH------hHHHHHHHHHHHHhHHHHHHHHH
Q 002479 718 ARIQAAFREHSLKVQTKAIRFSSPEEEA-QNIIAALKIQHAFRNFEV--RK------KMAAAARIQHRFRSWKVRKEFLN 788 (917)
Q Consensus 718 ~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~-~~~~Aa~~IQ~~~R~~~~--rr------~~~aai~IQs~~Rg~~~R~~~~~ 788 (917)
.++|+..||+..|..+...- ... ...-....||..|||++. -+ ....++.+|++.||..+|+.+.+
T Consensus 539 ~~~qa~~rg~~~r~~~~~~~-----~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~ 613 (1401)
T KOG2128|consen 539 LRIQASERGFSTRNKFRSRL-----DFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSR 613 (1401)
T ss_pred hhhhhhccccchHHHHHhhh-----hHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHH
Confidence 34588888888886664322 222 244566778888887763 11 12267788888888888888755
Q ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHH
Q 002479 789 MRR-------QAIKIQAAFRGFQVRKQYGKILW 814 (917)
Q Consensus 789 ~r~-------aai~IQa~~Rg~~~Rk~y~~~~~ 814 (917)
..+ ++++||+++|+++.|+.|+.+..
T Consensus 614 ~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~~ 646 (1401)
T KOG2128|consen 614 KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLFT 646 (1401)
T ss_pred HHHHHHHhhhhHHHHHHHHHhcccchHHHHHhc
Confidence 432 77888888888888888877653
No 141
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.90 E-value=0.046 Score=66.41 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=67.0
Q ss_pred cccHHHHHHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCc----------ccCCCCC
Q 002479 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD----------FRDKYGW 604 (917)
Q Consensus 536 ~~t~L~~aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin----------~~D~~G~ 604 (917)
+++.|+.|..+.+++ ++++|++ +..+ ..+|.+|...|+.++|+.++.+-.... ..-..+-
T Consensus 62 Gr~al~iai~nenle--~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~di 132 (822)
T KOG3609|consen 62 GRLALHIAIDNENLE--LQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDI 132 (822)
T ss_pred hhhceecccccccHH--HHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCc
Confidence 667788887777777 7777765 3232 357778999999999999997643321 1223478
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 002479 605 TALHWAAYYGREKMVVDLLSAGAKPNL 631 (917)
Q Consensus 605 TpLH~Aa~~G~~eiv~~LL~~GAd~n~ 631 (917)
|||.+||..++.||+++||..|+.+-.
T Consensus 133 tPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 133 TPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred cHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 999999999999999999999998865
No 142
>PTZ00014 myosin-A; Provisional
Probab=94.77 E-value=0.068 Score=66.93 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 768 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQ 808 (917)
Q Consensus 768 ~aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~~~Rk~ 808 (917)
..++.||++||||+.|++|++++.+++.||++||+|+.++.
T Consensus 778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 36889999999999999999999999999999999998875
No 143
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=94.35 E-value=0.019 Score=67.28 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=52.9
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCC-CCceEEEEEEeCCC
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGH 441 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph-~~G~V~l~v~~~n~ 441 (917)
.|.|+.|-.+...||++|+..|..+.. ......+|..+...-|+||. .+|.|.+.++.-..
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~ 305 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSE 305 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeeccccc
Confidence 799999999999999999999998754 45667789999999999888 89999999986433
No 144
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=94.25 E-value=0.13 Score=47.34 Aligned_cols=82 Identities=21% Similarity=0.164 Sum_probs=58.8
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCc------------ccceeecccCeeEEeCCCC----
Q 002479 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV------------RVPAEFVQAGVYRCFLPPH---- 427 (917)
Q Consensus 364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~------------~Vpa~~i~~gvlrC~~Pph---- 427 (917)
+..|...|-.-++..||-+|+++|..+.. ...|.|-+. .+..+.++...|+|-+||=
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 45799999999999999999999986643 133444321 1223445678999999975
Q ss_pred --CCceEEEEEEeCCCCccccccccccC
Q 002479 428 --SPGLFLLYMSLDGHKPISQVLNFEYR 453 (917)
Q Consensus 428 --~~G~V~l~v~~~n~~~~se~~~Feyr 453 (917)
.|=.|.|++....+ ..|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~~-~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGKR-KRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCCC-CcCCCCCcEec
Confidence 46667777765434 67999999995
No 145
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.22 E-value=0.091 Score=60.16 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=42.2
Q ss_pred ccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 002479 566 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (917)
Q Consensus 566 ~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa 611 (917)
.+..-.|+||+|+..|...+|.+||..|+|+..+|..|.||..++.
T Consensus 426 ~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 426 NDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4445789999999999999999999999999999999999998876
No 146
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=94.18 E-value=0.17 Score=46.89 Aligned_cols=82 Identities=18% Similarity=0.148 Sum_probs=63.8
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCC-------cccceeec----ccCeeEEeCCCC------C
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VRVPAEFV----QAGVYRCFLPPH------S 428 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-------~~Vpa~~i----~~gvlrC~~Pph------~ 428 (917)
.|..+|-.-++..||-+|.++|..+.. ....|.|++ .++-+.+- ....|+|-+||= .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k------~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK------PDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC------CCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 588899999999999999999986532 357899998 55444432 566788888864 3
Q ss_pred CceEEEEEEeCCCCccccccccccC
Q 002479 429 PGLFLLYMSLDGHKPISQVLNFEYR 453 (917)
Q Consensus 429 ~G~V~l~v~~~n~~~~se~~~Feyr 453 (917)
|=.|++++...++...|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 5677888888766789999999995
No 147
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=94.05 E-value=0.053 Score=37.24 Aligned_cols=20 Identities=35% Similarity=0.474 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhHHHHHHHH
Q 002479 768 AAAARIQHRFRSWKVRKEFL 787 (917)
Q Consensus 768 ~aai~IQs~~Rg~~~R~~~~ 787 (917)
.+|+.||+.||||++|++|.
T Consensus 4 ~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 4 RAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 47888999999999988873
No 148
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=92.98 E-value=0.3 Score=43.60 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=53.3
Q ss_pred eEEEEECCCCCCcccCCCcceEEEeCCcccceeecccCeeEEeCCCC-----------CCceEEEEEEeCCCCccccccc
Q 002479 381 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLFLLYMSLDGHKPISQVLN 449 (917)
Q Consensus 381 ~kVlI~G~f~~~~~~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph-----------~~G~V~l~v~~~n~~~~se~~~ 449 (917)
.-+-++|.+|.. ++.+-||++++-+.+=.+-.|.|.+|+- +|..||+.+--..|..-+.-..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 456788998854 7999999999998888888999999964 4788999988878766566667
Q ss_pred cccC
Q 002479 450 FEYR 453 (917)
Q Consensus 450 Feyr 453 (917)
|.|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7774
No 149
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=92.33 E-value=0.27 Score=58.74 Aligned_cols=102 Identities=25% Similarity=0.410 Sum_probs=68.2
Q ss_pred CChhHHHHHHhcCcc-------ceeccCCCCCCCCccEEe-ee--hhhhhhccccCccceeccCCCchhhhhhhcccCCE
Q 002479 33 LRPNEIHAILCNSKY-------FSINAKPVNLPKSGTVVL-FD--RKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNE 102 (917)
Q Consensus 33 ~~~~e~~~~l~~~~~-------~~~~~~~~~~p~~g~~~~-~~--~~~~~~~~~dg~~w~~~~~~~~~~e~~~~lk~~~~ 102 (917)
|..++|+++|..--+ |..+. -.+|+-||||| |- -++.-.|-.|||.|.- -|.--+..|+|.
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~Wty--lD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~ 100 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTY--LDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGY 100 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeec--ccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCe
Confidence 456667777755433 22222 36789999987 43 2456779999999975 355566667666
Q ss_pred ee--E---EEEeeccCCCCccceeeeeccCCCC---------CceEEEeecccCC
Q 002479 103 ER--I---HVYYAHGEDSPTFVRRCYWLLDKTL---------ENIVLVHYRETHE 143 (917)
Q Consensus 103 ~~--~---~~~y~~~~~~~~f~rr~y~~~~~~~---------~~~vlvhy~~~~~ 143 (917)
.+ . ++|+-=+|.....-||.|-|+-... ++.+||||-.-..
T Consensus 101 ~lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~ 155 (669)
T PF08549_consen 101 TLEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP 155 (669)
T ss_pred EEEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence 53 1 2244436888899999999995433 5689999987543
No 150
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=92.02 E-value=0.63 Score=42.91 Aligned_cols=82 Identities=11% Similarity=0.038 Sum_probs=57.1
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCCcc------------cceeecccCeeEEeCCCC------
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVR------------VPAEFVQAGVYRCFLPPH------ 427 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~~~------------Vpa~~i~~gvlrC~~Pph------ 427 (917)
.|.++|=.-|++.||.+|.+++.... +-...+.|-+.. -|+.+-..-.+++-+||=
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 68999999999999999999997553 223445554321 133344466788889965
Q ss_pred CCceEEEEEEeCCCCccccccccccC
Q 002479 428 SPGLFLLYMSLDGHKPISQVLNFEYR 453 (917)
Q Consensus 428 ~~G~V~l~v~~~n~~~~se~~~Feyr 453 (917)
.|=.|-+++.-.....+|++..|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 34455566666545578999999995
No 151
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=85.62 E-value=82 Score=38.76 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=28.4
Q ss_pred HHHHHHhhhhhhhhhHHhhcCChH------HHHHHHHHHHHHHHHHHhHHHHHhHH
Q 002479 719 RIQAAFREHSLKVQTKAIRFSSPE------EEAQNIIAALKIQHAFRNFEVRKKMA 768 (917)
Q Consensus 719 ~IQ~~~R~~~~Rkr~~~~~~~~~~------~~~~~~~Aa~~IQ~~~R~~~~rr~~~ 768 (917)
.|-+-+-.|+.+.|..+.+++... ..+-+..+++++|++.|||++|++++
T Consensus 778 ~lv~kVn~WLv~sRWkk~q~~a~sVIKLkNkI~yRae~v~k~Q~~~Rg~L~rkr~~ 833 (1259)
T KOG0163|consen 778 ELVAKVNKWLVRSRWKKSQYGALSVIKLKNKIIYRAECVLKAQRIARGYLARKRHR 833 (1259)
T ss_pred HHHHHHHHHHHHhHHHHhhhhhhheeehhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 344445567777777666655422 23334455566666666666666544
No 152
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=77.09 E-value=6.8 Score=41.28 Aligned_cols=95 Identities=14% Similarity=0.040 Sum_probs=61.5
Q ss_pred CChhHHHHHHcCCHHHHHHHHHcCCCCcccCC----CCCcHHHHHHHc--CCHHHHHHHHhcC-CCCCCCCCCCCCCCCC
Q 002479 570 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK----YGWTALHWAAYY--GREKMVVDLLSAG-AKPNLVTDPTSQNPGG 642 (917)
Q Consensus 570 G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~----~G~TpLH~Aa~~--G~~eiv~~LL~~G-Ad~n~~tdp~~~d~~G 642 (917)
..++|-+|...+...++-+|+..- +...+|. .+.--+-++... -...+.+.+|.+| +++|. +--+-+.|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCc
Confidence 467788888778888888887531 1111111 122233344332 3566777888877 45553 12245679
Q ss_pred CcHHHHHHHcCcHHHHHHHHHhcccc
Q 002479 643 LNAADIASKKGFDGLAAFLSEQALVA 668 (917)
Q Consensus 643 ~TpL~lA~~~g~~~iv~~Ll~~Ga~~ 668 (917)
.|-|+-|...+..+++.+|+++|+..
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999999753
No 153
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=76.14 E-value=4.6 Score=42.49 Aligned_cols=49 Identities=24% Similarity=0.214 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHcC-CCCccc---CCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 002479 581 GYTWAILLFSWSG-LSLDFR---DKYGWTALHWAAYYGREKMVVDLLSAGAKP 629 (917)
Q Consensus 581 G~~~~v~~LL~~G-adin~~---D~~G~TpLH~Aa~~G~~eiv~~LL~~GAd~ 629 (917)
....+++.+|.+| ++||.+ -+.|.|-|--|..++..+++.+||++||-.
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 3467888999988 788853 567999999999999999999999999953
No 154
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=68.34 E-value=3.1e+02 Score=34.16 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhHH
Q 002479 714 AEAAARIQAAFREHSLKVQTKA 735 (917)
Q Consensus 714 ~~Aa~~IQ~~~R~~~~Rkr~~~ 735 (917)
..+++++|++.|||++|+|+..
T Consensus 813 ae~v~k~Q~~~Rg~L~rkr~~~ 834 (1259)
T KOG0163|consen 813 AECVLKAQRIARGYLARKRHRP 834 (1259)
T ss_pred HHHHHHHHHHHHHHHHHhhhch
Confidence 5688999999999999988754
No 155
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=65.92 E-value=18 Score=43.98 Aligned_cols=43 Identities=30% Similarity=0.515 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 768 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKIL 813 (917)
Q Consensus 768 ~aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~ 813 (917)
..|.+||+.||.+.+|++|.++|..+.++ .-|.+.|++|--.+
T Consensus 697 ~~A~~IQkAWRrfv~rrky~k~ree~t~l---l~gKKeRRr~Si~R 739 (1106)
T KOG0162|consen 697 GMARRIQKAWRRFVARRKYEKMREEATKL---LLGKKERRRYSINR 739 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHH
Confidence 37889999999999999999999877665 23666777664443
No 156
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=65.63 E-value=70 Score=44.11 Aligned_cols=35 Identities=31% Similarity=0.509 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 002479 792 QAIKIQAAFRGFQVRKQYGKILW---SVGVLEKAILRW 826 (917)
Q Consensus 792 aai~IQa~~Rg~~~Rk~y~~~~~---aa~~IQ~~iR~~ 826 (917)
-++.+|+.+|||.+|+.|.+... ++.+||..+|.|
T Consensus 775 ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~ 812 (1930)
T KOG0161|consen 775 IITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAY 812 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666666655544433 555566555555
No 157
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=62.98 E-value=12 Score=46.73 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 002479 867 AEERVERSVVRVQSMFRSKKAQEEYRRMKLA 897 (917)
Q Consensus 867 ~~~~~~~A~~~IQs~~R~~~aR~qy~rlk~~ 897 (917)
.+++.++++++|||+|||+.+|++.+.+-.+
T Consensus 24 e~rk~e~~av~vQs~~Rg~~~r~~~~~~~R~ 54 (1001)
T KOG0942|consen 24 EERKQEKNAVKVQSFWRGFRVRHNQKLLFRE 54 (1001)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 4557788999999999999999988777444
No 158
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=62.17 E-value=9.4 Score=48.79 Aligned_cols=77 Identities=19% Similarity=0.141 Sum_probs=54.9
Q ss_pred CccceeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCC-cccceeecccCeeEEeCCCCC--CceEEEEEEe
Q 002479 362 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEFVQAGVYRCFLPPHS--PGLFLLYMSL 438 (917)
Q Consensus 362 ~~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-~~Vpa~~i~~gvlrC~~Pph~--~G~V~l~v~~ 438 (917)
-++++|++|+|.-|+.+||+.|+|.|.++...-+....+..+-=.- ..++.+..-..-+.|..-++. ||.|.+.|-.
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~~ 126 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVGV 126 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceEeeeecCCCccccccccceeeccCCCCCCCCceeEEecc
Confidence 5677899999999999999999999998865322222222221111 235556666778899988885 7999988884
No 159
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=59.35 E-value=24 Score=43.10 Aligned_cols=35 Identities=43% Similarity=0.526 Sum_probs=24.6
Q ss_pred HHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002479 763 VRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGF 803 (917)
Q Consensus 763 ~rr~~~aai~IQs~~Rg~~~R~~~~~~r~aai~IQa~~Rg~ 803 (917)
+|++.+||+.||+.||||.+|++++ .+||.-|+..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk~~------~~I~~e~d~~ 60 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKKAQ------IEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHh
Confidence 4556678888899999888888765 4555555443
No 160
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=58.06 E-value=1.4e+02 Score=41.42 Aligned_cols=40 Identities=23% Similarity=0.265 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 002479 769 AAARIQHRFRSWKVRKEFLNMRR---QAIKIQAAFRGFQVRKQ 808 (917)
Q Consensus 769 aai~IQs~~Rg~~~R~~~~~~r~---aai~IQa~~Rg~~~Rk~ 808 (917)
-.+.+|+.+|||++|+.|.+... ++..||+.+|.|...+.
T Consensus 775 ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~~lr~ 817 (1930)
T KOG0161|consen 775 IITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYLKLRT 817 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 56678999999999999977654 88899999998865443
No 161
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=57.74 E-value=19 Score=44.91 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=21.1
Q ss_pred HHHhHHHHHHHHHHHHhHHHHHHHHHHHH
Q 002479 763 VRKKMAAAARIQHRFRSWKVRKEFLNMRR 791 (917)
Q Consensus 763 ~rr~~~aai~IQs~~Rg~~~R~~~~~~r~ 791 (917)
.|++.++|+.+|+.|||++.|++++..-+
T Consensus 25 ~rk~e~~av~vQs~~Rg~~~r~~~~~~~R 53 (1001)
T KOG0942|consen 25 ERKQEKNAVKVQSFWRGFRVRHNQKLLFR 53 (1001)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 44556688888888888888887655443
No 162
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=56.07 E-value=29 Score=42.45 Aligned_cols=35 Identities=40% Similarity=0.505 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHhH
Q 002479 744 EAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSW 780 (917)
Q Consensus 744 ~~~~~~Aa~~IQ~~~R~~~~rr~~~aai~IQs~~Rg~ 780 (917)
..++.+||..||+++|+|..|++ +...||.-|+-.
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk--~~~~I~~e~d~~ 60 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKK--AQIEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHh
Confidence 35678999999999999999886 567788767654
No 163
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=51.16 E-value=25 Score=40.39 Aligned_cols=21 Identities=33% Similarity=0.419 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHH
Q 002479 767 MAAAARIQHRFRSWKVRKEFL 787 (917)
Q Consensus 767 ~~aai~IQs~~Rg~~~R~~~~ 787 (917)
.+||+.||+|||++.+|.+.+
T Consensus 17 ikaAilIQkWYRr~~ARle~r 37 (631)
T KOG0377|consen 17 IKAAILIQKWYRRYEARLEAR 37 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 457777788888877777644
No 164
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=47.50 E-value=29 Score=35.67 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=32.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 002479 606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (917)
Q Consensus 606 pLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~ 663 (917)
-|.+|+..|-...|.-.+++|.+++. ++|..|+..+|..|+.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------------HHHHHHHHhhHHHHHHHhhc
Confidence 45677777777777777777777774 46777777777777777653
No 165
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=46.94 E-value=19 Score=41.28 Aligned_cols=24 Identities=25% Similarity=0.326 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhH
Q 002479 711 RTAAEAAARIQAAFREHSLKVQTK 734 (917)
Q Consensus 711 r~~~~Aa~~IQ~~~R~~~~Rkr~~ 734 (917)
-++.+||+.||+|||++.+|...+
T Consensus 14 ~raikaAilIQkWYRr~~ARle~r 37 (631)
T KOG0377|consen 14 TRAIKAAILIQKWYRRYEARLEAR 37 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345778999999999999886553
No 166
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=42.23 E-value=38 Score=29.48 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=36.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHh
Q 002479 605 TALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (917)
Q Consensus 605 TpLH~Aa~~G~~eiv~~LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~ 664 (917)
.-|..|+..|+.++++.+++.+ .+ ....+..|....+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~------------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP------------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 4578888889999998888754 11 14568888888888888888876
No 167
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=36.94 E-value=1.2e+02 Score=30.17 Aligned_cols=67 Identities=16% Similarity=0.196 Sum_probs=49.6
Q ss_pred ecCCCccCCCCeEEEEECCCCCCcccCC-CcceEEEeCC----c-ccceeecccCeeEEeCCCC---CCceEEEEEEeCC
Q 002479 370 VSPAWAFSNEKTKILVTGFFHKDCLHLS-KSNMFCVCGE----V-RVPAEFVQAGVYRCFLPPH---SPGLFLLYMSLDG 440 (917)
Q Consensus 370 ~sP~w~~~~gg~kVlI~G~f~~~~~~~~-~~~~~c~FG~----~-~Vpa~~i~~gvlrC~~Pph---~~G~V~l~v~~~n 440 (917)
+-|+-=.++.. ||.|+=.-- +. .....|.|-. + .+++.+|.+-|++.-+|-. -+|.|.+.|.|++
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~-----l~~~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g 76 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDP-----LDEEDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDG 76 (142)
T ss_pred ecCceeecCCC-EEEEEEeCC-----CCCCCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECC
Confidence 34666677777 888874321 22 2356776654 2 5888899999999999999 9999999999966
Q ss_pred CC
Q 002479 441 HK 442 (917)
Q Consensus 441 ~~ 442 (917)
-.
T Consensus 77 ~~ 78 (142)
T PF14545_consen 77 VS 78 (142)
T ss_pred EE
Confidence 53
No 168
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=35.83 E-value=59 Score=28.24 Aligned_cols=48 Identities=13% Similarity=0.037 Sum_probs=38.1
Q ss_pred ChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 002479 571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA 625 (917)
Q Consensus 571 ~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiv~~LL~~ 625 (917)
...|..|...|+.++++.++..+ .++ ...|..|+...+.+++.+|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35678899999999999888655 332 3468999999999999999885
No 169
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=35.51 E-value=91 Score=27.86 Aligned_cols=64 Identities=20% Similarity=0.157 Sum_probs=38.5
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCcceEEEeCC-cccceee-cccCeeEE--eCCCC-CCceEEEEEEe
Q 002479 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEF-VQAGVYRC--FLPPH-SPGLFLLYMSL 438 (917)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-~~Vpa~~-i~~gvlrC--~~Pph-~~G~V~l~v~~ 438 (917)
.|.-++|.---..++++|+|.|+.|.. .+.||. ++|.... .+++-++- .++.. .||..++.+..
T Consensus 3 ~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg~ 71 (81)
T PF09099_consen 3 TILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVGS 71 (81)
T ss_dssp EEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEETT
T ss_pred eEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEecc
Confidence 588899999999999999999999954 366665 3444432 33332222 33333 56777666543
No 170
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=35.16 E-value=16 Score=30.62 Aligned_cols=9 Identities=44% Similarity=1.032 Sum_probs=5.7
Q ss_pred ccCccceec
Q 002479 76 KDGHNWKKK 84 (917)
Q Consensus 76 ~dg~~w~~~ 84 (917)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 499999863
No 171
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=33.02 E-value=70 Score=39.26 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 002479 872 ERSVVRVQSMFRSKKAQEEYRRMKLAHDQA 901 (917)
Q Consensus 872 ~~A~~~IQs~~R~~~aR~qy~rlk~~~~~~ 901 (917)
..-+.+||..||.+.+|++|.++|.+...+
T Consensus 696 d~~A~~IQkAWRrfv~rrky~k~ree~t~l 725 (1106)
T KOG0162|consen 696 DGMARRIQKAWRRFVARRKYEKMREEATKL 725 (1106)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999999998887654
No 172
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=29.17 E-value=67 Score=23.98 Aligned_cols=19 Identities=47% Similarity=0.503 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhHHHHHHH
Q 002479 768 AAAARIQHRFRSWKVRKEF 786 (917)
Q Consensus 768 ~aai~IQs~~Rg~~~R~~~ 786 (917)
-|+..||-.||.++.|+.-
T Consensus 10 YAt~lI~dyfr~~K~rk~~ 28 (35)
T PF08763_consen 10 YATLLIQDYFRQFKKRKEQ 28 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3777888888888887753
No 173
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=28.89 E-value=5.3e+02 Score=32.74 Aligned_cols=17 Identities=24% Similarity=0.514 Sum_probs=8.6
Q ss_pred HHhhHHHHHHHHHHHHH
Q 002479 881 MFRSKKAQEEYRRMKLA 897 (917)
Q Consensus 881 ~~R~~~aR~qy~rlk~~ 897 (917)
++|+...+-.|+.++.+
T Consensus 472 yfR~sqg~~Alre~r~~ 488 (1054)
T COG5261 472 YFRRSQGQAALREIRYQ 488 (1054)
T ss_pred HHHhCcchhHHHHHHHH
Confidence 44444445556665544
No 174
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=28.84 E-value=21 Score=29.83 Aligned_cols=9 Identities=44% Similarity=1.047 Sum_probs=6.9
Q ss_pred ccCccceec
Q 002479 76 KDGHNWKKK 84 (917)
Q Consensus 76 ~dg~~w~~~ 84 (917)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 599999763
No 175
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=26.62 E-value=95 Score=32.05 Aligned_cols=24 Identities=13% Similarity=-0.043 Sum_probs=11.6
Q ss_pred HHHHHHcCcHHHHHHHHHhccccc
Q 002479 646 ADIASKKGFDGLAAFLSEQALVAQ 669 (917)
Q Consensus 646 L~lA~~~g~~~iv~~Ll~~Ga~~~ 669 (917)
|+.|+..|....+.-.+++|.+.+
T Consensus 147 l~~a~~kgll~F~letlkygg~~~ 170 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVD 170 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCccc
Confidence 344555555554444455554443
No 176
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=26.05 E-value=70 Score=33.61 Aligned_cols=45 Identities=18% Similarity=0.293 Sum_probs=36.2
Q ss_pred CcceEEEeCCccccee---ecccCeeEEeCCCCCCceEEEEEEeCCCC
Q 002479 398 KSNMFCVCGEVRVPAE---FVQAGVYRCFLPPHSPGLFLLYMSLDGHK 442 (917)
Q Consensus 398 ~~~~~c~FG~~~Vpa~---~i~~gvlrC~~Pph~~G~V~l~v~~~n~~ 442 (917)
-.+.+|.||.+.+.-. .+.+|-|||..-|+.+|+..+.=...+..
T Consensus 8 ~~~vsVsF~GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKt 55 (249)
T COG4674 8 LDGVSVSFGGFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKT 55 (249)
T ss_pred EeceEEEEcceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccC
Confidence 3468999999886655 38999999999999999998875554443
No 177
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=24.77 E-value=19 Score=43.16 Aligned_cols=62 Identities=18% Similarity=0.278 Sum_probs=41.5
Q ss_pred HHHcCCcHHHHHHHHHc-CCCCCcccCCCChhHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcH
Q 002479 543 LTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTA 606 (917)
Q Consensus 543 aa~~~~l~~~lv~~Ll~-gadvn~~d~~G~T~LHlAa~~G~~~~v~~LL~~Gadin~~D~~G~Tp 606 (917)
++..+... ++-.+++ |+.++..|..|.+|+|+++..|...+++.++..-.+++.....|.++
T Consensus 403 ~~~~~~ss--~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~~ 465 (605)
T KOG3836|consen 403 AALNNSSS--LVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMIA 465 (605)
T ss_pred hhhcCCcc--ceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhccccccccc
Confidence 44444433 2333343 77788888888888888888888888888877666665555555443
No 178
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility]
Probab=24.37 E-value=58 Score=42.32 Aligned_cols=82 Identities=18% Similarity=0.090 Sum_probs=64.6
Q ss_pred HHHHHHHHhhhhhhhhhHHhhcCChHHHHHHHHHHHHHHHHHHhHHHHH-------hHHHHHHHHHHHHhHHHHHHHHHH
Q 002479 717 AARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK-------KMAAAARIQHRFRSWKVRKEFLNM 789 (917)
Q Consensus 717 a~~IQ~~~R~~~~Rkr~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rr-------~~~aai~IQs~~Rg~~~R~~~~~~ 789 (917)
+...|.+++....++.+.++. .+...+| |++++.++ ...+++.+|..|+.+..+..++..
T Consensus 922 ~~~k~~~~~~~~~~~~~~~~~-----------~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1062)
T KOG4229|consen 922 SFFKQKWFRLTLERKGLLRLS-----------EGSVLIQ--RLELLGRRTCPVAGAPAVAAASLQNAWPVYRELSGRLGL 988 (1062)
T ss_pred HHHHHHHHHhhhccccchhhc-----------chhHHHH--HHHHhcccCCcchhhhhhhhhhccccchhhhhhhhhHHH
Confidence 667788888888888776666 6667777 77777665 234788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002479 790 RRQAIKIQAAFRGFQVRKQYGK 811 (917)
Q Consensus 790 r~aai~IQa~~Rg~~~Rk~y~~ 811 (917)
|++++.+|..+++...++.+-.
T Consensus 989 ~~s~~~~~~~~~~~~~~~~~~~ 1010 (1062)
T KOG4229|consen 989 RRSFIADQSPRSRPAYTMIFAA 1010 (1062)
T ss_pred hhhhcchhcccccchhhhhHHH
Confidence 9999999999988877776644
No 179
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=23.22 E-value=65 Score=34.17 Aligned_cols=48 Identities=23% Similarity=0.199 Sum_probs=37.3
Q ss_pred HHhcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHhccccccccccc
Q 002479 622 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 675 (917)
Q Consensus 622 LL~~GAd~n~~tdp~~~d~~G~TpL~lA~~~g~~~iv~~Ll~~Ga~~~l~~~~l 675 (917)
|++.||--|. .|....||-++|...|+..+-+.|++.|+...+--..+
T Consensus 1 lle~ga~wn~------id~~n~t~gd~a~ern~~rly~~lv~~gv~Selll~~l 48 (271)
T KOG1709|consen 1 LLEYGAGWNF------IDYENKTVGDLALERNQSRLYRRLVEAGVPSELLLFAL 48 (271)
T ss_pred CcccCCCccc------cChhhCCchHHHHHccHHHHHHHHHHcCCchhhhhhcc
Confidence 4667777777 67888899999999999999999999988765544333
No 180
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=22.42 E-value=2.6e+02 Score=29.70 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=47.9
Q ss_pred CCeEEEEECCCCCCcc--------cCCCcceEEEeCCcccceeecccCeeEEeCCCC-CCceEEEEEEeCCC
Q 002479 379 EKTKILVTGFFHKDCL--------HLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGH 441 (917)
Q Consensus 379 gg~kVlI~G~f~~~~~--------~~~~~~~~c~FG~~~Vpa~~i~~gvlrC~~Pph-~~G~V~l~v~~~n~ 441 (917)
-|.=|+|-|+++.+-. ..+-.+-++.|+++.+|-..++++=+.+.+|.. .+|.+.+.|...+.
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 3555777777765310 011246789999999999999999999999987 68999999997554
Done!