Query 002480
Match_columns 917
No_of_seqs 333 out of 1756
Neff 4.7
Searched_HMMs 29240
Date Tue Mar 26 16:13:37 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002480.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1201-1205//hhsearch_pdb/002480hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 1.0 1 1 377.4 36.3 380 287-912 64-457 (802)
2 1weo_A Cellulose synthase, cat 1.0 1 1 317.7 8.2 88 23-111 4-91 (93)
3 2z86_A Chondroitin synthase; G 1.0 1 1 133.6 18.2 126 362-614 371-497 (625)
4 1xhb_A Polypeptide N-acetylgal 1.0 1 1 127.2 14.1 121 362-605 25-148 (472)
5 2d7i_A Polypeptide N-acetylgal 1.0 1 1 126.3 13.2 115 363-596 109-224 (570)
6 2ffu_A Ppgalnact-2, polypeptid 1.0 1 1 125.4 10.1 113 362-596 62-174 (501)
7 2z86_A Chondroitin synthase; G 1.0 1 1 114.5 11.4 129 362-615 89-218 (625)
8 1qg8_A Protein (spore coat pol 1.0 1 1 113.4 7.8 124 366-612 1-129 (255)
9 3l7i_A Teichoic acid biosynthe 1.0 1 1 109.6 0.0 20 392-411 343-363 (729)
10 3bcv_A Putative glycosyltransf 1.0 1 1 106.7 13.5 111 363-596 2-112 (240)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=1.00 E-value=1 Score=377.40 Aligned_cols=380 Identities=24% Similarity=0.422 Sum_probs=308.3
Q ss_pred HHHH-HHHHHHHHHHHHHHEECCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 2489-99999999998631001245674-----04678999999999999999842154453343023557666330289
Q 002480 287 PYRL-IILLRLVILGLFFHYRILHPVND-----AYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEG 360 (917)
Q Consensus 287 ~yR~-~iv~~li~l~~yl~wRi~~~~~~-----a~~lWl~~~i~Ei~fa~swil~q~~kw~Pi~R~~~~drL~~r~e~~~ 360 (917)
+.|+ ++++.+++.+.|++||++.+++. +.++|+.++++|+++.+.|++..+..|.|..|...++ .
T Consensus 64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~ 134 (802)
T 4hg6_A 64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------L 134 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------C
T ss_conf 1578999999999999999986600677530589999999999999999999999999836567888898---------9
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999730199814899999879999999998829799998379990599815669998767999645376777406888
Q 002480 361 KPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEP 440 (917)
Q Consensus 361 ~~~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~ltf~al~E~~~fA~~WvPFCkk~~iep 440 (917)
.++++|.|+|+|||+| |++.++.+|+.|+++++||.+++.++|.|||.++-|.+.
T Consensus 135 ~~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~---------------------- 189 (802)
T 4hg6_A 135 QPEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS---------------------- 189 (802)
T ss_dssp CTTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC----------------------
T ss_pred CCCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC----------------------
T ss_conf 8567984899999799---989999999999984669998289999989987642234----------------------
Q ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf 99023421002333487990569999999999999999999888752058877766579998999987888102232314
Q 002480 441 RAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG 520 (917)
Q Consensus 441 R~Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~ 520 (917)
..|+.+++... .++ .++.+.++
T Consensus 190 -----------------~d~~i~~~~~~---~~~----~l~~~~~~---------------------------------- 211 (802)
T 4hg6_A 190 -----------------PDPELAQKAQE---RRR----ELQQLCRE---------------------------------- 211 (802)
T ss_dssp -----------------SSHHHHHHHHH---HHH----HHHHHHHH----------------------------------
T ss_pred -----------------CCHHHHHHHHH---HHH----HHHHHHHH----------------------------------
T ss_conf -----------------88789999886---669----99999985----------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCC
Q ss_conf 7997555578768389994567999997873003589997401357998999943898889379999998733-199999
Q 002480 521 QNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSG 599 (917)
Q Consensus 521 ~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~-~Dp~~g 599 (917)
.++.|+.|++ +++.||||+|.+++ .++++||+.+|||+. +.|++|++.+.+| .||
T Consensus 212 ------------~~v~~i~~~~----~~~GKa~alN~gl~----~a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp--- 267 (802)
T 4hg6_A 212 ------------LGVVYSTRER----NEHAKAGNMSAALE----RLKGELVVVFDADHV-PSRDFLARTVGYFVEDP--- 267 (802)
T ss_dssp ------------HTCEEEECSS----CCSHHHHHHHHHHH----HCCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS---
T ss_pred ------------CCCEEEEECC----CCCCCHHHHHHHHH----HCCCCEEEEECCCCC-CCHHHHHHHHHHHHCCC---
T ss_conf ------------6947999268----87763689999999----659999999999988-18589999999984099---
Q ss_pred CCEEEEECCCCCCCCCCC-------CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 617998047200489954-------4110023466754402233578840003572112442128999888999998689
Q 002480 600 KKICYVQFPQRFDGIDRH-------DRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCN 672 (917)
Q Consensus 600 ~~v~~VQ~PQ~F~nid~~-------Dryan~~~vFfdi~~~glDg~~gp~yvGTGc~fRR~ALyG~~p~~~~~~~~~~~~ 672 (917)
+++.||+++.+.+.++. .++.+++..|+.....+.+.+++++++|+++++||+++.
T Consensus 268 -~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~---------------- 330 (802)
T 4hg6_A 268 -DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD---------------- 330 (802)
T ss_dssp -SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH----------------
T ss_pred -CEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH----------------
T ss_conf -859996567976785576544477651678999988887547643884542664032499999----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 99976644556653333566776677611355544443211234321001487046776520884899987767518999
Q 002480 673 CLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVP 752 (917)
Q Consensus 673 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~fG~s~~~~~s~~~e~GG~p 752 (917)
++||++
T Consensus 331 --------------------------------------------------------------------------~vGgf~ 336 (802)
T 4hg6_A 331 --------------------------------------------------------------------------EAGGFA 336 (802)
T ss_dssp --------------------------------------------------------------------------HHTTCC
T ss_pred --------------------------------------------------------------------------HCCCCC
T ss_conf --------------------------------------------------------------------------708867
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99881558999877311243224743542370115445139999999768949999767898423567989999998767
Q 002480 753 TGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVL 832 (917)
Q Consensus 753 ~~~~~~~~~~eai~v~sC~YE~~T~WG~evGW~ygSITEDi~TsirLh~rGWRsvY~~p~~~Af~G~aP~TLsa~lkQR~ 832 (917)
. ++++||.+++++++.+||+++|+ |+.. +++.+|.++.++++||.
T Consensus 337 ~---------------------------------~~~~ED~~l~~rl~~~G~ri~~~-~~~~-~~~~~p~t~~~~~~Qr~ 381 (802)
T 4hg6_A 337 G---------------------------------ETITEDAETALEIHSRGWKSLYI-DRAM-IAGLQPETFASFIQQRG 381 (802)
T ss_dssp C---------------------------------SSSSHHHHHHHHHHTTTCCEEEC-CCCC-EEECCCCSHHHHHHHHH
T ss_pred C---------------------------------CCCCHHHHHHHHHHHCCCEEEEE-CCCE-EEECCCCCHHHHHHHHH
T ss_conf 8---------------------------------88030999999999769959993-6887-99668889999999999
Q ss_pred HHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 65400078887302621112489988667997644456554689999999999999970896432203679999999987
Q 002480 833 RWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEVISDCISFSISDCI 912 (917)
Q Consensus 833 RWA~G~iQIllsr~~Pll~g~~~~Ltl~QRL~YL~~~lypl~si~~liy~llPil~LltG~~iip~~s~~~l~~~I~~~~ 912 (917)
||++|.+|+++ +++|++ .+++++.+|+.|+...++++.+++.++++++|+++++++..++......++.+++..++
T Consensus 382 RW~~G~~q~l~-~~~pl~---~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l 457 (802)
T 4hg6_A 382 RWATGMMQMLL-LKNPLF---RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLA 457 (802)
T ss_dssp HHHHHHHHHHH-HSCTTS---CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHH-HHCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99700899998-859234---68998999999999999999999999999999999999678763389999999999999
No 2
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=1.00 E-value=1 Score=317.74 Aligned_cols=88 Identities=63% Similarity=1.266 Sum_probs=83.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65445564343488543334866434789992110579999723233788875159878888100012269988789988
Q 002480 23 DEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEE 102 (917)
Q Consensus 23 ~~~~~~~~~~~~~~~~CqiCgd~Vg~~~~Ge~FvaC~eC~FPVCRpCYeyErkeG~q~CPqCktrYkr~kGsprv~gdee 102 (917)
++++ +|||+++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+|||+
T Consensus 4 g~~~-~kp~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~kgsp~v~GDe~ 82 (93)
T 1weo_A 4 GSSG-PKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDED 82 (93)
T ss_dssp SSSS-SSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCC
T ss_pred CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7778-875200588726114574354778988876300677351889999985267405545876223368887666644
Q ss_pred CCCCCCCCC
Q ss_conf 778432201
Q 002480 103 EDDTDDLEN 111 (917)
Q Consensus 103 e~~~dd~e~ 111 (917)
|+++||+++
T Consensus 83 e~d~dD~~~ 91 (93)
T 1weo_A 83 EEDIDSGPS 91 (93)
T ss_dssp CCCSCCCCS
T ss_pred CCCCCCCCC
T ss_conf 465332445
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=133.63 Aligned_cols=126 Identities=18% Similarity=0.237 Sum_probs=94.5
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99997301998148999998799999999988297999983799905998156699987679996453767774068889
Q 002480 362 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 441 (917)
Q Consensus 362 ~~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~ltf~al~E~~~fA~~WvPFCkk~~iepR 441 (917)
....|.|.|.|+|+| ++ ..+..++.|+++.+|| .+.++|.|||..+-|.+.+.+
T Consensus 371 ~~~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~-------------------- 424 (625)
T 2z86_A 371 LKRVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQE-------------------- 424 (625)
T ss_dssp CCSSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHH--------------------
T ss_pred HCCCCEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCHHHHHHHHH--------------------
T ss_conf 035971799995789---88-9999999999817699--828999989698649999999--------------------
Q ss_pred CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 90234210023334879905699999999999999999998887520588777665799989999878881022323147
Q 002480 442 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 521 (917)
Q Consensus 442 ~Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~~ 521 (917)
+.
T Consensus 425 -----------------------------------------~~------------------------------------- 426 (625)
T 2z86_A 425 -----------------------------------------HY------------------------------------- 426 (625)
T ss_dssp -----------------------------------------HH-------------------------------------
T ss_pred -----------------------------------------HH-------------------------------------
T ss_conf -----------------------------------------88-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH-CCCCCCC
Q ss_conf 997555578768389994567999997873003589997401357998999943898889379999998733-1999996
Q 002480 522 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGK 600 (917)
Q Consensus 522 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~-~Dp~~g~ 600 (917)
...|++.++..+ ...+++|+|.+++ .++|+||+.+|+|.+ ..|++|.+.+-.| .+|
T Consensus 427 --------~~~~~i~~~~~~------n~G~~~a~n~g~~----~a~g~~i~~ld~D~~-~~~~~l~~~~~~~~~~~---- 483 (625)
T 2z86_A 427 --------ANHPRVRFISQK------NKGIGSASNTAVR----LCRGFYIGQLDSDDF-LEPDAVELCLDEFRKDL---- 483 (625)
T ss_dssp --------TTCTTEEEEEEC------CCCHHHHHHHHHH----HCCSSEEEECCTTCE-ECTTHHHHHHHHHHHCT----
T ss_pred --------HHCCCEEEEECC------CCCHHHHHHHHHH----HCCCCEEEEECCCCC-CCHHHHHHHHHHHHHCC----
T ss_conf --------549938999179------8898999999998----567787999889766-28359999999998479----
Q ss_pred CEEEEECCCCCCCC
Q ss_conf 17998047200489
Q 002480 601 KICYVQFPQRFDGI 614 (917)
Q Consensus 601 ~v~~VQ~PQ~F~ni 614 (917)
+++.|.....+.+.
T Consensus 484 ~~~~v~~~~~~~~~ 497 (625)
T 2z86_A 484 SLACVYTTNRNIDR 497 (625)
T ss_dssp TCSEEEEEEEEECT
T ss_pred CEEEEEEEEEEECC
T ss_conf 81399820489879
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=1.00 E-value=1 Score=127.20 Aligned_cols=121 Identities=15% Similarity=0.069 Sum_probs=93.6
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99997301998148999998799999999988297999983799905998156-69998767999645376777406888
Q 002480 362 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAML-TFEALSETSEFARKWVPFCKKFKIEP 440 (917)
Q Consensus 362 ~~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~l-tf~al~E~~~fA~~WvPFCkk~~iep 440 (917)
+.++|.|.|.|+|+| |+...+..||.|+++..||...+.++|.|||..+- |.+.+.
T Consensus 25 ~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~-------------------- 81 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE-------------------- 81 (472)
T ss_dssp CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH--------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCHHHCEEEEEEECCCCCHHHHHHHH--------------------
T ss_conf 867997599999678---878999999999986595767607999977999678999999--------------------
Q ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf 99023421002333487990569999999999999999999888752058877766579998999987888102232314
Q 002480 441 RAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG 520 (917)
Q Consensus 441 R~Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~ 520 (917)
.+.+
T Consensus 82 -----------------------------------------~~~~----------------------------------- 85 (472)
T 1xhb_A 82 -----------------------------------------SYVK----------------------------------- 85 (472)
T ss_dssp -----------------------------------------HHHH-----------------------------------
T ss_pred -----------------------------------------HHHH-----------------------------------
T ss_conf -----------------------------------------9998-----------------------------------
Q ss_pred CCCCCCCCCCCCC-CEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCC
Q ss_conf 7997555578768-3899945679999978730035899974013579989999438988893799999987331-9999
Q 002480 521 QNGVRDIEGNLLP-RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTS 598 (917)
Q Consensus 521 ~~g~~d~~~~~lP-~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~~-Dp~~ 598 (917)
..| ++.++..+++. .+++|+|.+++ .+.|+||+.+|+|.. ..+++|.+.+-.+. +|
T Consensus 86 ----------~~~~~v~vi~~~~n~-----G~~~a~N~g~~----~A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~~-- 143 (472)
T 1xhb_A 86 ----------KLKVPVHVIRMEQRS-----GLIRARLKGAA----VSRGQVITFLDAHCE-CTAGWLEPLLARIKHDR-- 143 (472)
T ss_dssp ----------SSSSCEEEEECSSCC-----CHHHHHHHHHH----HCCSSEEEEEESSEE-ECTTCHHHHHHHHHHCT--
T ss_pred ----------HCCCCEEEEECCCCC-----CHHHHHHHHHH----HCCCCEEEEECCCEE-ECCCHHHHHHHHHHHCC--
T ss_conf ----------779857999889878-----76999999998----615876999889857-67347999999998399--
Q ss_pred CCCEEEE
Q ss_conf 9617998
Q 002480 599 GKKICYV 605 (917)
Q Consensus 599 g~~v~~V 605 (917)
.++.+
T Consensus 144 --~~~v~ 148 (472)
T 1xhb_A 144 --RTVVC 148 (472)
T ss_dssp --TEEEE
T ss_pred --CEEEE
T ss_conf --77999
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=1.00 E-value=1 Score=126.31 Aligned_cols=115 Identities=16% Similarity=0.081 Sum_probs=90.4
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH-HHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99973019981489999987999999999882979999837999059981566-99987679996453767774068889
Q 002480 363 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT-FEALSETSEFARKWVPFCKKFKIEPR 441 (917)
Q Consensus 363 ~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~lt-f~al~E~~~fA~~WvPFCkk~~iepR 441 (917)
+.+|.|.|.|||+| |....+.+||.|+++..||...+.+.|.|||..+-| .+.+
T Consensus 109 ~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l---------------------- 163 (570)
T 2d7i_A 109 ETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPL---------------------- 163 (570)
T ss_dssp SSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHH----------------------
T ss_pred CCCCCEEEEEEECC---CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH----------------------
T ss_conf 88997599999789---87899999999998358745767999998999837889999----------------------
Q ss_pred CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 90234210023334879905699999999999999999998887520588777665799989999878881022323147
Q 002480 442 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 521 (917)
Q Consensus 442 ~Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~~ 521 (917)
+.+.
T Consensus 164 ---------------------------------------~~~~------------------------------------- 167 (570)
T 2d7i_A 164 ---------------------------------------EDYM------------------------------------- 167 (570)
T ss_dssp ---------------------------------------HHHH-------------------------------------
T ss_pred ---------------------------------------HHHH-------------------------------------
T ss_conf ---------------------------------------9999-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 997555578768389994567999997873003589997401357998999943898889379999998733199
Q 002480 522 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 596 (917)
Q Consensus 522 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~~Dp 596 (917)
...|++.++..+++ ..+++|+|.+++ .+.|+||+.||+|.. ..+++|...+-.+.+.
T Consensus 168 --------~~~~~v~vi~~~~n-----~G~~~A~N~G~~----~A~gd~i~fLD~D~~-~~p~~L~~ll~~l~~~ 224 (570)
T 2d7i_A 168 --------ALFPSVRILRTKKR-----EGLIRTRMLGAS----VATGDVITFLDSHCE-ANVNWLPPLLDRIARN 224 (570)
T ss_dssp --------TTSTTEEEEECSSC-----CCHHHHHHHHHH----HCCSSEEEECCSSEE-ECTTCSHHHHHHHHHC
T ss_pred --------HHCCEEEEEECCCC-----CCHHHHHHHHHH----HCCCCEEEEECCCCC-CCCCHHHHHHHHHHHC
T ss_conf --------74780899989988-----798999999998----667888999759852-2403899999999848
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=1.00 E-value=1 Score=125.35 Aligned_cols=113 Identities=17% Similarity=0.096 Sum_probs=89.9
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99997301998148999998799999999988297999983799905998156699987679996453767774068889
Q 002480 362 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 441 (917)
Q Consensus 362 ~~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~ltf~al~E~~~fA~~WvPFCkk~~iepR 441 (917)
+..+|.|.|.|||+| |....+..||.|+++..||...+.+.|.|||..+-|.+.+
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---------------------- 116 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---------------------- 116 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG----------------------
T ss_pred CCCCCCEEEEEEECC---CCHHHHHHHHHHHHHHCCHHHCEEEEEEECCCCCHHHHHH----------------------
T ss_conf 867997799999696---8689999999999850866335149999789995678999----------------------
Q ss_pred CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 90234210023334879905699999999999999999998887520588777665799989999878881022323147
Q 002480 442 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 521 (917)
Q Consensus 442 ~Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~~ 521 (917)
+
T Consensus 117 -----------------------------------------~-------------------------------------- 117 (501)
T 2ffu_A 117 -----------------------------------------L-------------------------------------- 117 (501)
T ss_dssp -----------------------------------------G--------------------------------------
T ss_pred -----------------------------------------H--------------------------------------
T ss_conf -----------------------------------------8--------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 997555578768389994567999997873003589997401357998999943898889379999998733199
Q 002480 522 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 596 (917)
Q Consensus 522 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~~Dp 596 (917)
...|++.|+..+++ ..+++|+|.+++ .+.|+||+.+|+|.. ..+++|.+.+-.+.+.
T Consensus 118 --------~~~~~v~vi~~~~n-----~G~~~A~N~G~~----~A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 118 --------GKIEKVRVLRNDRR-----EGLMRSRVRGAD----AAQAKVLTFLDSHCE-CNEHWLEPLLERVAED 174 (501)
T ss_dssp --------GGBTTEEEEECSSC-----CHHHHHHHHHHH----HCCSSEEEECCSSEE-ECTTCHHHHHHHHHHC
T ss_pred --------HCCCCEEEEECCCC-----CCHHHHHHHHHH----HCCCCEEEEECCCCC-CCCCHHHHHHHHHHHC
T ss_conf --------41898799989988-----688999999898----668988999779830-6720799999999839
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=1.00 E-value=1 Score=114.52 Aligned_cols=129 Identities=19% Similarity=0.203 Sum_probs=99.4
Q ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99997301998148999998799999999988297999983799905998156699987679996453767774068889
Q 002480 362 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 441 (917)
Q Consensus 362 ~~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~ltf~al~E~~~fA~~WvPFCkk~~iepR 441 (917)
+...|.|+|+|||+| |+ ..+..|+.|+++.+||. .+.++|.|||.++-|.+ +++
T Consensus 89 ~~~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~-------~~~-------------- 142 (625)
T 2z86_A 89 QLIIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEE-------IVR-------------- 142 (625)
T ss_dssp -CCCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHH-------HHH--------------
T ss_pred CCCCCCEEEEEECCC---CH-HHHHHHHHHHHHHCCCC-CEEEEEEECCCCHHHHH-------HHH--------------
T ss_conf 346982799990388---57-88999999998436579-86999996798320799-------999--------------
Q ss_pred CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 90234210023334879905699999999999999999998887520588777665799989999878881022323147
Q 002480 442 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 521 (917)
Q Consensus 442 ~Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~~ 521 (917)
.+.
T Consensus 143 ----------------------------------------~~~------------------------------------- 145 (625)
T 2z86_A 143 ----------------------------------------EFE------------------------------------- 145 (625)
T ss_dssp ----------------------------------------TTT-------------------------------------
T ss_pred ----------------------------------------HHH-------------------------------------
T ss_conf ----------------------------------------856-------------------------------------
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCCCC
Q ss_conf 9975555787683899945679999978730035899974013579989999438988893799999987331-999996
Q 002480 522 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGK 600 (917)
Q Consensus 522 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~~-Dp~~g~ 600 (917)
.-+++.|+.+++ ..+.||+|+|.+++ .+.|+||+.+|+|+. ..+++|.+.+-.|. +|
T Consensus 146 ---------~~~~i~~i~~~~----~~~g~~~a~N~g~~----~a~g~~v~~lD~D~~-~~~~~l~~~~~~~~~~~---- 203 (625)
T 2z86_A 146 ---------SLLNIKYVRQKD----YGYQLCAVRNLGLR----AAKYNYVAILDCDMA-PNPLWVQSYMELLAVDD---- 203 (625)
T ss_dssp ---------TTSCEEEEEECC----CSCCHHHHHHHHHH----HCCSSEEEEECTTEE-ECTTHHHHHHHHHHHCT----
T ss_pred ---------HCCCEEEEEECC----CCCCHHHHHHHHHH----HCCCCEEEEECCCCC-CCHHHHHHHHHHHHCCC----
T ss_conf ---------317829998678----77430689999998----688478999789877-79799999999985598----
Q ss_pred CEEEEECCCCCCCCC
Q ss_conf 179980472004899
Q 002480 601 KICYVQFPQRFDGID 615 (917)
Q Consensus 601 ~v~~VQ~PQ~F~nid 615 (917)
.++.|+..+.+.+..
T Consensus 204 ~~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 204 NVALIGPRKYIDTSK 218 (625)
T ss_dssp TEEEECCEEEECCTT
T ss_pred CEEEEEEEEECCCCC
T ss_conf 639998556516742
No 8
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=1.00 E-value=1 Score=113.35 Aligned_cols=124 Identities=13% Similarity=0.243 Sum_probs=92.7
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 73019981489999987999999999882979999837999059981566999876799964537677740688899023
Q 002480 366 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 445 (917)
Q Consensus 366 P~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~ltf~al~E~~~fA~~WvPFCkk~~iepR~Pe~ 445 (917)
|.|.|.|||+| ++ ..+.+|+.|+++..|| .+.++|.|||..+-|.+.+.+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~------------------------ 50 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRP------------------------ 50 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGG------------------------
T ss_pred CEEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHH------------------------
T ss_conf 95999997179---77-8999999999856278--649999978997108999999------------------------
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
Q ss_conf 42100233348799056999999999999999999988875205887776657999899998788810223231479975
Q 002480 446 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 525 (917)
Q Consensus 446 YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~~~g~~ 525 (917)
+.
T Consensus 51 -------------------------------------~~----------------------------------------- 52 (255)
T 1qg8_A 51 -------------------------------------FL----------------------------------------- 52 (255)
T ss_dssp -------------------------------------GG-----------------------------------------
T ss_pred -------------------------------------HH-----------------------------------------
T ss_conf -------------------------------------86-----------------------------------------
Q ss_pred CCCCCCCCCEEEEECCCCCCC----CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHC-CCCCCC
Q ss_conf 555787683899945679999----978730035899974013579989999438988893799999987331-999996
Q 002480 526 DIEGNLLPRLVYVSREKRPGF----DHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGK 600 (917)
Q Consensus 526 d~~~~~lP~lvYvsRekrpg~----~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~~-Dp~~g~ 600 (917)
.-|++.|+..+.. +. ....+++|+|.+++ .++|+||+.+|+|.+ ..|++|.+.+-.|. +|
T Consensus 53 -----~~~~i~~i~~~~~-~~~~~~~n~G~~~a~N~gi~----~a~g~~i~~lD~Dd~-~~~~~l~~~~~~~~~~~---- 117 (255)
T 1qg8_A 53 -----NDNRVRFYQSDIS-GVKERTEKTRYAALINQAIE----MAEGEYITYATDDNI-YMPDRLLKMVRELDTHP---- 117 (255)
T ss_dssp -----GSTTEEEEECCCC-SHHHHHSSCHHHHHHHHHHH----HCCCSEEEEEETTEE-ECTTHHHHHHHHHHHCT----
T ss_pred -----HCCCEEEEECCCC-CCCCCCCCCCHHHHHHHHHH----HCCCCEEEEECCCCC-CCHHHHHHHHHHHHHCC----
T ss_conf -----0698899964653-33222146678999999998----758888999689876-28279999999998589----
Q ss_pred CEEEEECCCCCC
Q ss_conf 179980472004
Q 002480 601 KICYVQFPQRFD 612 (917)
Q Consensus 601 ~v~~VQ~PQ~F~ 612 (917)
++++|.....+.
T Consensus 118 ~~~~v~~~~~~~ 129 (255)
T 1qg8_A 118 EKAVIYSASKTY 129 (255)
T ss_dssp TCCEEEEEEEEE
T ss_pred CCEEEEECEEEE
T ss_conf 905998432899
No 9
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=1.00 E-value=1 Score=109.63 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=7.9
Q ss_pred HHCCCCCCC-CCEEEEECCCC
Q ss_conf 882979999-83799905998
Q 002480 392 ILAVDYPVD-KVACYVSDDGA 411 (917)
Q Consensus 392 ila~DYP~~-kl~~yVsDDG~ 411 (917)
......|++ ++-++.|..|.
T Consensus 343 ~~~~~~p~~~~~ivf~s~~g~ 363 (729)
T 3l7i_A 343 LTDKEDNVKPKTIVFESFGGK 363 (729)
T ss_dssp HHCCGGGCEEEEEEEEBGGGT
T ss_pred HHHHHCCCCCCEEEEEECCCC
T ss_conf 987437776998999978999
No 10
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=1.00 E-value=1 Score=106.67 Aligned_cols=111 Identities=14% Similarity=0.173 Sum_probs=85.8
Q ss_pred CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99973019981489999987999999999882979999837999059981566999876799964537677740688899
Q 002480 363 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRA 442 (917)
Q Consensus 363 ~~lP~VDVfV~T~dP~kEPp~vv~nTvlsila~DYP~~kl~~yVsDDG~s~ltf~al~E~~~fA~~WvPFCkk~~iepR~ 442 (917)
+..|.|.|.|||+| ++ ..+.+++.|+++..|| .+.++|.|||..+-|.+.+.+
T Consensus 2 ~~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~--------------------- 54 (240)
T 3bcv_A 2 SLIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDD--------------------- 54 (240)
T ss_dssp -CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHH---------------------
T ss_pred CCCCCEEEEEECCC---CH-HHHHHHHHHHHHCCCC--CEEEEEEECCCCCCHHHHHHH---------------------
T ss_conf 99984899996689---77-8999999999957689--869999989998678999999---------------------
Q ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 02342100233348799056999999999999999999988875205887776657999899998788810223231479
Q 002480 443 PEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQN 522 (917)
Q Consensus 443 Pe~YF~~k~d~~~~~~~p~f~~err~~KreYee~k~rI~~L~~~~~~vpe~~w~m~dgt~wpg~~~rdhp~~iqv~l~~~ 522 (917)
+.+
T Consensus 55 ----------------------------------------~~~------------------------------------- 57 (240)
T 3bcv_A 55 ----------------------------------------YAA------------------------------------- 57 (240)
T ss_dssp ----------------------------------------HHH-------------------------------------
T ss_pred ----------------------------------------HHH-------------------------------------
T ss_conf ----------------------------------------996-------------------------------------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 97555578768389994567999997873003589997401357998999943898889379999998733199
Q 002480 523 GVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 596 (917)
Q Consensus 523 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGAlNallrvSav~tngp~Il~lDcDhy~~n~~~Lr~amcf~~Dp 596 (917)
..|++.++..+ ...+++|.|.+++ .+.|+||+.+|+|.+ ..+++|.+.+..+.++
T Consensus 58 --------~~~~i~~i~~~------n~G~~~a~N~g~~----~a~g~~i~~lD~Dd~-~~~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 58 --------QYPNIKVIHKK------NAGLGMACNSGLD----VATGEYVAFCDSDDY-VDSDMYMTMYNVAQKY 112 (240)
T ss_dssp --------HCSSEEEEECC------CCCHHHHHHHHHH----HCCSSEEEECCTTCC-CCTTHHHHHHHHHHHH
T ss_pred --------HCCCEEEEECC------CCCHHHHHHHHHH----HCCCCEEEEECCCCC-CCHHHHHHHHHHHHHC
T ss_conf --------58978999889------9994999999999----768999999879875-8889999999999846
Done!