Query 002481
Match_columns 917
No_of_seqs 359 out of 2110
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 16:37:31 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002481.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1201-1205//hhsearch_pdb/002481hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 1.0 1 1 329.6 25.2 253 82-362 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 1.0 1 1 299.0 27.6 262 84-373 8-307 (312)
3 4fai_A CG5976, isoform B; alph 1.0 1 1 297.9 20.6 271 68-364 17-323 (330)
4 3tc8_A Leucine aminopeptidase; 1.0 1 1 295.2 26.8 250 81-362 19-308 (309)
5 3gux_A Putative Zn-dependent e 1.0 1 1 288.8 26.6 249 82-362 22-312 (314)
6 3pb6_X Glutaminyl-peptide cycl 1.0 1 1 285.4 23.3 267 69-364 17-328 (330)
7 3kas_A Transferrin receptor pr 1.0 1 1 276.6 18.1 210 160-374 264-492 (640)
8 3fed_A Glutamate carboxypeptid 1.0 1 1 271.9 13.8 210 159-373 309-554 (707)
9 2afw_A Glutaminyl-peptide cycl 1.0 1 1 270.9 24.7 269 67-364 9-327 (329)
10 1tkj_A Aminopeptidase, SGAP; d 1.0 1 1 259.1 27.4 255 82-370 2-282 (284)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=1.00 E-value=1 Score=329.63 Aligned_cols=253 Identities=19% Similarity=0.232 Sum_probs=197.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99989999999999871799889998899999999999983031358851199997732689743454323571011036
Q 002481 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (917)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~y~~ 161 (917)
++||++||+++++++++||||++||++++++++||.++|+++| .+++.|.|.... ..+ .+.+
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~---------~~~---~~~~ 81 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIA---------YDG---TLLK 81 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TTS---CEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEEECC---------CCC---CCCE
T ss_conf 7629999999999986769948999899999999999999859------826888677406---------778---7240
Q ss_pred CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 254999983788898998779997305665799-------------9988972599999999999985289899629999
Q 002481 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (917)
Q Consensus 162 ~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~s-------------pGA~Dd~sgva~lLEi~r~L~~~~~~~~~~I~Fl 228 (917)
..|||++++|+ .++.|+|+|||||++.+ +||+||++|||+|||++|.|.+ .+++++|+|+
T Consensus 82 ~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~--~~~~~~i~~~ 154 (309)
T 4fuu_A 82 ARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQ--QQPELGIDII 154 (309)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHH--SCCSSEEEEE
T ss_pred EEEEEEEECCC-----CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCCCCEEEE
T ss_conf 68999997899-----9844899841477777877654444567767824673539999999999763--0778756888
Q ss_pred EECCCCCCC--------------CCHHHHHHCCC-CCCCCEEEEEEECCCCCCCCEEEECCCC---HHHHHHHHHHCCCC
Q ss_conf 808767897--------------66588984099-7579408999504767998205613899---67899999980699
Q 002481 229 FNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGPN---LWAVENFAAVAKYP 290 (917)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~-~a~~v~a~iNLD~~G~gg~~~lfq~g~~---~~li~~y~~~a~~p 290 (917)
|+++||.|+ .||+.|++++. +..++.++||+||+|.+++......+.. +.+.+...+.+...
T Consensus 155 ~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T 4fuu_A 155 FLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKA 234 (309)
T ss_dssp EECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHT
T ss_pred EECCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 63333357535313300333343010578756535676269999641367898736750476366699999999998752
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 974333223247997899835775205997399985418----999998968983799988999999999999999
Q 002481 291 SGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD----KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (917)
Q Consensus 291 ~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~I~~~sLq~~g~~vl~~v~~ 362 (917)
.... ....+.+ ....+||.+|.+.+|||+++++... ..++|||+.||+|+||+++||++|+++++++++
T Consensus 235 ~~~~--~~~~~~~-~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 235 GYGK--TFIDERG-DTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TCTT--TEEEEEC-CCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCCC--CCCCCCC-CCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 7764--4344679-99989769999628997899751478887989999953361448999999999999999840
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=1.00 E-value=1 Score=299.00 Aligned_cols=262 Identities=18% Similarity=0.219 Sum_probs=195.7
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999999987179988999889999999999998303135885119999773268974345432357101103625
Q 002481 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (917)
Q Consensus 84 fs~erA~~~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~y~~~~ 163 (917)
-+.....+.|+.+ ++||++||++++++++||.++|+++| .++++|.|...... ....+..
T Consensus 8 d~~~~~~~~l~~i--l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~~------------~~~~~~~ 67 (312)
T 4f9u_A 8 DDEVHFNRTLDSI--LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVPV------------FGELTFA 67 (312)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT------------TEEEEEE
T ss_pred CHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEEEECCC------------CCCEEEE
T ss_conf 7799999998885--58989879899999999999999889------96999868975577------------8863689
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCC-----CCCCCCCCHHHHHHHHHHHHHHHHC-----CCCCCCCEEEEEECCC
Q ss_conf 49999837888989987799973056657-----9999889725999999999999852-----8989962999980876
Q 002481 164 HIVLRILPKYASEAGENAILVSSHIDTVS-----AGEGAGDCSSCVAVMLELARVMSQW-----AHEFKNAVIFLFNTGE 233 (917)
Q Consensus 164 NII~~i~g~~~~~~~~~~ILi~aH~DSv~-----~spGA~Dd~sgva~lLEi~r~L~~~-----~~~~~~~I~Flf~~~E 233 (917)
|||++++|+ +++.|+++|||||++ .++||+||++|||+|||++|.|++. +.+|+++|+|+|+++|
T Consensus 68 Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaE 142 (312)
T 4f9u_A 68 NVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGE 142 (312)
T ss_dssp EEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCC
T ss_pred EEEEEECCC-----CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
T ss_conf 999997899-----875389999984588777888789657760079999999999987875026899960899985676
Q ss_pred CCC--------CCCHHHHHHCCCCC-------------CCCEEEEEEECCCCCCCCEEEECCCCHHHHH----H---HHH
Q ss_conf 789--------76658898409975-------------7940899950476799820561389967899----9---999
Q 002481 234 EEG--------LNGAHSFVTQHPWS-------------TTIRVAVDLEAMGIGGRSALFQAGPNLWAVE----N---FAA 285 (917)
Q Consensus 234 E~g--------l~GS~~f~~~h~~a-------------~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~----~---y~~ 285 (917)
|.| ++||++|++++.+. .++.+++|+||+|..++..........+... . ..+
T Consensus 143 E~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (312)
T 4f9u_A 143 EAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT 222 (312)
T ss_dssp SCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 05656776653227299999877621442122243554561130232013568987227872261042679999999998
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 80699974333223247997899835775205997399985418999998968983799988999999999999999863
Q 002481 286 VAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (917)
Q Consensus 286 ~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~I~~~sLq~~g~~vl~~v~~la~ 365 (917)
....+............+ ..+|||.+|.+ .|||+++++...+.++|||+.||+|+||+++++++++.++.++.++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 223 AGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp TTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCC--CCCCCHHHHHH-CCCCEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 413434565544546799--98882599998-799989987888988898973574559999999999999999999984
Q ss_pred CCCCCCCC
Q ss_conf 99999998
Q 002481 366 STSIPKGN 373 (917)
Q Consensus 366 s~~l~~~~ 373 (917)
....|.+.
T Consensus 300 ~~~~P~d~ 307 (312)
T 4f9u_A 300 RHTSPVNL 307 (312)
T ss_dssp HCCSCCCC
T ss_pred CCCCCCCH
T ss_conf 78987722
No 3
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=1.00 E-value=1 Score=297.92 Aligned_cols=271 Identities=21% Similarity=0.219 Sum_probs=192.9
Q ss_pred CCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCC
Q ss_conf 3599998521138--89998999999999987179988999889999999999998303135885119999773268974
Q 002481 68 EHMPPPLTAEQAG--RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGAN 145 (917)
Q Consensus 68 ~~lP~~~~~~~~~--~~~fs~erA~~~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~ 145 (917)
...|..++..... ...-+.++..+.|+.+ ++||++||++++++++||.++++++| .+++.|.|.....
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~i--l~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~-- 86 (330)
T 4fai_A 17 SYNPSELSEPRFLEYSNLSDKLHLREAIDKI--LIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAP-- 86 (330)
T ss_dssp GCCCCCSCHHHHHHHHTCCCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET--
T ss_pred CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEEEECC--
T ss_conf 1488767989987403231899999988754--48979889899999999999999879------9799962064347--
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCC----CCCCCCCHHHHHHHHHHHHHHHH---CC
Q ss_conf 345432357101103625499998378889899877999730566579----99988972599999999999985---28
Q 002481 146 RVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQ---WA 218 (917)
Q Consensus 146 ~~~~~~~~~~~~~y~~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~----spGA~Dd~sgva~lLEi~r~L~~---~~ 218 (917)
. ....+..|||++++|+ .++.|+++|||||++. .+||+||++|||+|||++|.|++ .+
T Consensus 87 -~---------~~~~~~~Nii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~ 151 (330)
T 4fai_A 87 -I---------KGKLHFHNIIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPL 151 (330)
T ss_dssp -T---------TEEEEEEEEEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGG
T ss_pred -C---------CCCEEEEEEEEEECCC-----CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf -7---------7860578999997899-----982799997651466666787997776474999999999999754214
Q ss_pred CCCCCCEEEEEECCCCCCC--------CCHHHHHHCC---CCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHH--
Q ss_conf 9899629999808767897--------6658898409---97579408999504767998205613899678999999--
Q 002481 219 HEFKNAVIFLFNTGEEEGL--------NGAHSFVTQH---PWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAA-- 285 (917)
Q Consensus 219 ~~~~~~I~Flf~~~EE~gl--------~GS~~f~~~h---~~a~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~~-- 285 (917)
.+|+++|+|+|++|||.|+ .||++|+++. .+.+++.++||+||+|.+++..........+.......
T Consensus 152 ~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~ 231 (330)
T 4fai_A 152 KKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVE 231 (330)
T ss_dssp GTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHH
T ss_pred CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHCCCHHCEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHH
T ss_conf 78876179998466203645554301100488875110005111134898742576588873054157613878888998
Q ss_pred --HCC------CCC---CCCCCCCCCCCC---CCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf --806------999---743332232479---978998357752059973999854189999989689837999889999
Q 002481 286 --VAK------YPS---GQIIGQDLFASG---VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQH 351 (917)
Q Consensus 286 --~a~------~p~---~~~l~~e~f~~g---~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~I~~~sLq~ 351 (917)
... +.. ........|+.. .....|||.+|.+ .|||+++++....+++|||+.||+|+||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~ 310 (330)
T 4fai_A 232 TRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDN 310 (330)
T ss_dssp HHHHHTTC---------------CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-CCCCEEEEECCCCCCCCCCCCCCHHHCCHHHHHH
T ss_conf 776652245553201333346643455667778888886199998-7998899979989787889747826589999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999986
Q 002481 352 LGENMLDFLLQTA 364 (917)
Q Consensus 352 ~g~~vl~~v~~la 364 (917)
.++.+..++.+..
T Consensus 311 ~~~ii~~Fv~EyL 323 (330)
T 4fai_A 311 LALIIRLFALEYL 323 (330)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 4
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=1.00 E-value=1 Score=295.21 Aligned_cols=250 Identities=19% Similarity=0.243 Sum_probs=197.8
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89998999999999987179988999889999999999998303135885119999773268974345432357101103
Q 002481 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (917)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~y~ 160 (917)
.++|+++|++++|++|+++++|..||+++.++++||.++++++| .++++|.+..+. +.+ .+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~g---~~~ 80 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTA---------YDG---TKL 80 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TTS---CEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEECCC---------CCC---CCC
T ss_conf 46569999999999997169988989899999999999999879------958999740456---------678---756
Q ss_pred CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 6254999983788898998779997305665799-------------998897259999999999998528989962999
Q 002481 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (917)
Q Consensus 161 ~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~s-------------pGA~Dd~sgva~lLEi~r~L~~~~~~~~~~I~F 227 (917)
+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||+|||++|.|.+. +++++|+|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred CCEEEEEEECCC-----CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCCCEEE
T ss_conf 522899997899-----98569999505677777888543578830268555647699999999999847--99984899
Q ss_pred EEECCCCCCC-------------CCHHHHHHCCCC-CCCCEEEEEEECCCCCCCCEEEECCC-C---HHHHHHHHHHCCC
Q ss_conf 9808767897-------------665889840997-57940899950476799820561389-9---6789999998069
Q 002481 228 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-N---LWAVENFAAVAKY 289 (917)
Q Consensus 228 lf~~~EE~gl-------------~GS~~f~~~h~~-a~~v~a~iNLD~~G~gg~~~lfq~g~-~---~~li~~y~~~a~~ 289 (917)
+|+++||.|+ .||+.|++++.. ..+++++||+||+|..+...... +. . +.+++.+.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAARD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEC-CCCCCHHHHHHHHHHHHHHH
T ss_conf 99884102654544454555413218999857776633437899760367899823521-56610389999999999987
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCHHHHHHCCCCEEEEEEEC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9974333223247---99789983577520599739998541------89999989689837999889999999999999
Q 002481 290 PSGQIIGQDLFAS---GVFETATDFQVYTEVAGLSGLDFAYT------DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (917)
Q Consensus 290 p~~~~l~~e~f~~---g~ips~TD~~~F~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~I~~~sLq~~g~~vl~~v 360 (917)
.+. ...|+. |. ..+||.+|.+++|||+++++.. ...++|||+.||+|+|+++++++.++++++++
T Consensus 233 -~g~---~~~f~~~~~g~--~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 233 -LGY---GKYFINAAGGA--ITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred -CCC---CCEECCCCCCC--CCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
T ss_conf -599---62004677898--889548788649998899861367666788988989757723489999999999999998
Q ss_pred HH
Q ss_conf 99
Q 002481 361 LQ 362 (917)
Q Consensus 361 ~~ 362 (917)
++
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred HC
T ss_conf 40
No 5
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=1.00 E-value=1 Score=288.80 Aligned_cols=249 Identities=20% Similarity=0.311 Sum_probs=198.4
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99989999999999871799889998899999999999983031358851199997732689743454323571011036
Q 002481 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (917)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~~~y~~ 161 (917)
++|+++|++++|++|++|++|..||+++.++++||.++++++| .++++|.+.... +.+ .+.+
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~g---~~~~ 83 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA---------YDG---TILK 83 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TTS---CEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEECCC---------CCC---CCCC
T ss_conf 8779999999999997669958979899999999999999879------979999763455---------678---8564
Q ss_pred CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC-------------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 254999983788898998779997305665799-------------9988972599999999999985289899629999
Q 002481 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (917)
Q Consensus 162 ~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~s-------------pGA~Dd~sgva~lLEi~r~L~~~~~~~~~~I~Fl 228 (917)
..|||++++|+ +++.|+++||+|||+.+ +||.||++|||+|||++|.|.+. +++++|+|+
T Consensus 84 ~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv 156 (314)
T 3gux_A 84 SRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIV 156 (314)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred CEEEEEEECCC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCCCEEEE
T ss_conf 02899998899-----98659997666678767778544467754378756588999999999999847--999868999
Q ss_pred EECCCCCCC--------------CCHHHHHHCCCC-CCCCEEEEEEECCCCCCCCEEEECCC-C---HHHHHHHHHHCCC
Q ss_conf 808767897--------------665889840997-57940899950476799820561389-9---6789999998069
Q 002481 229 FNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-N---LWAVENFAAVAKY 289 (917)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~~-a~~v~a~iNLD~~G~gg~~~lfq~g~-~---~~li~~y~~~a~~ 289 (917)
|+++||.|+ +||++|+++++. ..+++++||+||+|..++. +++.+. . +++++.+.+.++.
T Consensus 157 ~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~~~g~~~~~~~~l~~~~~~~~~~ 235 (314)
T 3gux_A 157 FFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FYYEGYSARTARSEMKKIWKKAHE 235 (314)
T ss_dssp EECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EEECTTHHHHCHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC-EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9887444653444455455430210899985776542241589987326789874-465236643279999999999987
Q ss_pred CCCCCCCCCCCC---CCCCCCCCCHHHHHHCCCCEEEEEEECC-------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 997433322324---7997899835775205997399985418-------999998968983799988999999999999
Q 002481 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYTD-------KSAVYHTKNDRLDLLKPGSLQHLGENMLDF 359 (917)
Q Consensus 290 p~~~~l~~e~f~---~g~ips~TD~~~F~~~~GIPgld~a~~~-------~~~~YHT~~Dt~d~I~~~sLq~~g~~vl~~ 359 (917)
.+. ...|+ .+ ...+||.+|.+++|||+++++... ..++|||+.||+|+|+++++++.+++++.+
T Consensus 236 -~g~---~~~f~~~~~~--~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 309 (314)
T 3gux_A 236 -LGY---GKYFVKEDGG--ETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDV 309 (314)
T ss_dssp -HTC---TTTEEEEECC--CCCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHH
T ss_pred -CCC---CCCCCCCCCC--CCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH
T ss_conf -398---4224566699--8899667888459985698751366545567899998976750128999999999999999
Q ss_pred HHH
Q ss_conf 999
Q 002481 360 LLQ 362 (917)
Q Consensus 360 v~~ 362 (917)
+++
T Consensus 310 ~y~ 312 (314)
T 3gux_A 310 IYN 312 (314)
T ss_dssp HHT
T ss_pred HHH
T ss_conf 962
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=1.00 E-value=1 Score=285.38 Aligned_cols=267 Identities=19% Similarity=0.203 Sum_probs=200.4
Q ss_pred CCCC--CCCCCCCC--CCCCCHHHHHH-HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC
Q ss_conf 5999--98521138--89998999999-9999871799889998899999999999983031358851199997732689
Q 002481 69 HMPP--PLTAEQAG--RRGFSELEAMK-HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSG 143 (917)
Q Consensus 69 ~lP~--~~~~~~~~--~~~fs~erA~~-~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g 143 (917)
+.|. +++.++.. +.+|+.+|+++ +|+.+ +++|.+||+++.++++||.+++++++. ..++++|.+..+.
T Consensus 17 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~- 89 (330)
T 3pb6_X 17 RVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTAST- 89 (330)
T ss_dssp -CCCTTCCCHHHHHHHHHTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEE-
T ss_pred CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH--HCCCCCCCHHHHHHHHHHHHHHHHHCC----CCEEEEEEEECCC-
T ss_conf 677768889999986211479999999999998--388899998999999999999997589----9759998632145-
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCC------CCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 74345432357101103625499998378889899877999730566579------999889725999999999999852
Q 002481 144 ANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA------GEGAGDCSSCVAVMLELARVMSQW 217 (917)
Q Consensus 144 ~~~~~~~~~~~~~~~y~~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~------spGA~Dd~sgva~lLEi~r~L~~~ 217 (917)
.. .+.+..|||++++|+ .++.|+++|||||++. .+||.||++|||++||++|.|.+.
T Consensus 90 --------~~----g~~~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~ 152 (330)
T 3pb6_X 90 --------PL----GPVDFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLE 152 (330)
T ss_dssp --------TT----EEEEEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHH
T ss_pred --------CC----CCCCCEEEEEEECCC-----CCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf --------56----886514899997899-----9855999814677777898867489867738999999999999997
Q ss_pred -----CCCCCCCEEEEEECCCCC--------CCCCHHHHHHCCC---------CCCCCEEEEEEECCCCCCCCEEEECCC
Q ss_conf -----898996299998087678--------9766588984099---------757940899950476799820561389
Q 002481 218 -----AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP---------WSTTIRVAVDLEAMGIGGRSALFQAGP 275 (917)
Q Consensus 218 -----~~~~~~~I~Flf~~~EE~--------gl~GS~~f~~~h~---------~a~~v~a~iNLD~~G~gg~~~lfq~g~ 275 (917)
+.+++++|+|+|+++||. |+.||++|++++. ..++++++||+||+|+.++......+.
T Consensus 153 ~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~ 232 (330)
T 3pb6_X 153 LSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPR 232 (330)
T ss_dssp HHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGG
T ss_pred HHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCEEEEEECCCCCCCCCCCEEECCC
T ss_conf 76402678887179999767646555678888715999999887467754445212857999565788899981254576
Q ss_pred CHHHHHHHHH---HC---C----CCCCCCCCCCCCCC--CCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 9678999999---80---6----99974333223247--99789983577520599739998541899999896898379
Q 002481 276 NLWAVENFAA---VA---K----YPSGQIIGQDLFAS--GVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDL 343 (917)
Q Consensus 276 ~~~li~~y~~---~a---~----~p~~~~l~~e~f~~--g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~ 343 (917)
..++.+.+.+ .. . +|.. ...|+. ..-...|||.+|.+ .|||++++......+.|||+.||+|+
T Consensus 233 t~~~~~~l~~i~~~~~~~g~~~~~p~~----~~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~ 307 (330)
T 3pb6_X 233 TVRWFHRLRSIEKRLHRLNLLQSHPQE----VMYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVN 307 (330)
T ss_dssp GHHHHHHHHHHHHHHHHTTCCSSCCSS----CSSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGG
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCC----CCCCCCCCCCCCCCCCHHHHHH-CCCCEEEEECCCCCCCCCCCCCCHHH
T ss_conf 257899999999999971864357753----2234553337888992476987-79988999747998988998575234
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 998899999999999999986
Q 002481 344 LKPGSLQHLGENMLDFLLQTA 364 (917)
Q Consensus 344 I~~~sLq~~g~~vl~~v~~la 364 (917)
||.+++++.++.+..++.+..
T Consensus 308 id~~~l~~~~~i~~~fv~Eyl 328 (330)
T 3pb6_X 308 LHPPTVHNLCRILAVFLAEYL 328 (330)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999984
No 7
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=1.00 E-value=1 Score=276.57 Aligned_cols=210 Identities=17% Similarity=0.182 Sum_probs=175.9
Q ss_pred CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHC----CCCCCCCEEEEEECCCCC
Q ss_conf 3625499998378889899877999730566579999889725999999999999852----898996299998087678
Q 002481 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLFNTGEEE 235 (917)
Q Consensus 160 ~~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~spGA~Dd~sgva~lLEi~r~L~~~----~~~~~~~I~Flf~~~EE~ 235 (917)
....|||++++|+ +.+++.|+++||+||| ++||.||++|++++||++|.|.+. +.+|+|+|+|++|++||.
T Consensus 264 ~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred EEEEEEEEEEECC---CCCCCCEEEECCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf 5678999999287---6777823640615889--9998867299999999999999746543799888579999898355
Q ss_pred CCCCHHHHHHCCC-C-CCCCEEEEEEECCCCCCCCEEEECCC-CHHHHHHHHHHCCCCCC-CCCCCC-CCC--CCCCCCC
Q ss_conf 9766588984099-7-57940899950476799820561389-96789999998069997-433322-324--7997899
Q 002481 236 GLNGAHSFVTQHP-W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG-QIIGQD-LFA--SGVFETA 308 (917)
Q Consensus 236 gl~GS~~f~~~h~-~-a~~v~a~iNLD~~G~gg~~~lfq~g~-~~~li~~y~~~a~~p~~-~~l~~e-~f~--~g~ips~ 308 (917)
|+.||+.|+++|. + .+++.++||+|++|.|++...++++| ..++++.+.+.+++|.+ .++.++ .+. .+.++++
T Consensus 339 gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~ 418 (640)
T 3kas_A 339 GSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLD 418 (640)
T ss_dssp TSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTT
T ss_pred CCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC
T ss_conf 74559999986015456488999961567668870588748889999999997579998887210134300034789998
Q ss_pred CCHHHHHHCCCCEEEEEEECCC-CC-CCCCCCCCCCCCCH------HHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8357752059973999854189-99-99896898379998------8999999999999999863999999988
Q 002481 309 TDFQVYTEVAGLSGLDFAYTDK-SA-VYHTKNDRLDLLKP------GSLQHLGENMLDFLLQTASSTSIPKGNA 374 (917)
Q Consensus 309 TD~~~F~~~~GIPgld~a~~~~-~~-~YHT~~Dt~d~I~~------~sLq~~g~~vl~~v~~la~s~~l~~~~~ 374 (917)
|||.+|.++.|||++++++..+ .| +|||.+||++++++ ..++.+++.+..++.+|++++.+|.+..
T Consensus 419 sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~ 492 (640)
T 3kas_A 419 NAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYE 492 (640)
T ss_dssp STHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTT
T ss_pred CCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 62288897379875632565798888868841437888753383789999999999999999715877799889
No 8
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=1.00 E-value=1 Score=271.88 Aligned_cols=210 Identities=19% Similarity=0.234 Sum_probs=174.5
Q ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH---CCCCCCCCEEEEEECCCCC
Q ss_conf 0362549999837888989987799973056657999988972599999999999985---2898996299998087678
Q 002481 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEE 235 (917)
Q Consensus 159 y~~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~spGA~Dd~sgva~lLEi~r~L~~---~~~~~~~~I~Flf~~~EE~ 235 (917)
...+.|||++++|+ +.+++.|+++||+|||. +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.
T Consensus 309 ~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~ 383 (707)
T 3fed_A 309 ITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF 383 (707)
T ss_dssp EEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred EEEEEEEEEEEECC---CCCCCEEEEECCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf 87778999998388---77786699956646788--88866728999999999998764430588888879998688456
Q ss_pred CCCCHHHHHHCCC--CCCCCEEEEEEECCCCCCCCEEEECCC-CHHHHHHHHHHCCCCCC----CCCCCCCCC-------
Q ss_conf 9766588984099--757940899950476799820561389-96789999998069997----433322324-------
Q 002481 236 GLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG----QIIGQDLFA------- 301 (917)
Q Consensus 236 gl~GS~~f~~~h~--~a~~v~a~iNLD~~G~gg~~~lfq~g~-~~~li~~y~~~a~~p~~----~~l~~e~f~------- 301 (917)
|+.||+.|+++|+ +.+++.++||+|++|.|+....++++| ..+++..+.+.+++|.+ .++.+.+++
T Consensus 384 Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 384 GLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp TSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred CCHHHHHHHHHCCHHHHHCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf 64469999985423235477999984345568851899608889999999873289986555546699999862544355
Q ss_pred -----CCCCCCCCCHHHHHHCCCCEEEEEEECCC-------C-CCCCCCCCCCCCCCH------HHHHHHHHHHHHHHHH
Q ss_conf -----79978998357752059973999854189-------9-999896898379998------8999999999999999
Q 002481 302 -----SGVFETATDFQVYTEVAGLSGLDFAYTDK-------S-AVYHTKNDRLDLLKP------GSLQHLGENMLDFLLQ 362 (917)
Q Consensus 302 -----~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~-~~YHT~~Dt~d~I~~------~sLq~~g~~vl~~v~~ 362 (917)
.+.+.++|||.+|.++.|||++++++..+ . ++|||.+||++++++ ..++.+++....++.+
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~ 543 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYE 543 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 67753246889987399997289012214224686666667877767775568899873385489999999999999999
Q ss_pred HHCCCCCCCCC
Q ss_conf 86399999998
Q 002481 363 TASSTSIPKGN 373 (917)
Q Consensus 363 la~s~~l~~~~ 373 (917)
||+++.+|.+.
T Consensus 544 La~~~vlP~~~ 554 (707)
T 3fed_A 544 LVDSKIIPFNI 554 (707)
T ss_dssp HHHCSSCCCCH
T ss_pred HHCCCCCCCCH
T ss_conf 81786678788
No 9
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=1.00 E-value=1 Score=270.95 Aligned_cols=269 Identities=20% Similarity=0.258 Sum_probs=201.0
Q ss_pred CCCCCCCCCCCCCC--CCCCCHHHH-HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH--CCCCCCCCCEEEEEEEECC
Q ss_conf 13599998521138--899989999-999999871799889998899999999999983--0313588511999977326
Q 002481 67 YEHMPPPLTAEQAG--RRGFSELEA-MKHVKALTQLGPHAVGSDALDRALQYVLAASQK--IKESKHWEADVEVDFFHAK 141 (917)
Q Consensus 67 ~~~lP~~~~~~~~~--~~~fs~erA-~~~L~~L~~igpR~~GS~~~~~a~~yL~~~l~~--ig~~~~~~~~vevd~~~~~ 141 (917)
.+++|.+++.++.. +.+++.+|+ .++|++| +++|.++|++++++++||.+++++ .| .+++++.+...
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~ 80 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQ 80 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHHCCC------CEEEEEEEEEC
T ss_conf 036888799699997653238999999999997--2998998979999999999999862789------77999888723
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC-------CCCCCCHHHHHHHHHHHHHH
Q ss_conf 89743454323571011036254999983788898998779997305665799-------99889725999999999999
Q 002481 142 SGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------EGAGDCSSCVAVMLELARVM 214 (917)
Q Consensus 142 ~g~~~~~~~~~~~~~~~y~~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~s-------pGA~Dd~sgva~lLEi~r~L 214 (917)
.. ..+.+..|||++++|+ +++.|+++||+|||+.. +||.||++|||++||++|.|
T Consensus 81 ~~-------------~g~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l 142 (329)
T 2afw_A 81 TP-------------YGYRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 142 (329)
T ss_dssp CT-------------TSSEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHT
T ss_pred CC-------------CCCCEEEEEEEEECCC-----CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 78-------------8872676999997799-----98389999843677767666767779665315599999999999
Q ss_pred HHC--------CCCCCCCEEEEEECCCCC--------CCCCHHHHHHCCC------------CCCCCEEEEEEECCCCCC
Q ss_conf 852--------898996299998087678--------9766588984099------------757940899950476799
Q 002481 215 SQW--------AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAVDLEAMGIGG 266 (917)
Q Consensus 215 ~~~--------~~~~~~~I~Flf~~~EE~--------gl~GS~~f~~~h~------------~a~~v~a~iNLD~~G~gg 266 (917)
.+. +.+++++|+|+|+++||. |+.||+.|++++. ..+++.++||+|++|.++
T Consensus 143 ~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~ 222 (329)
T 2afw_A 143 DKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN 222 (329)
T ss_dssp HHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSS
T ss_pred HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCC
T ss_conf 99875520133578886179999667433455677765530899999987477865333445300457899733479999
Q ss_pred CCEE--EECCCCHHHHHHH---HHHC---CCCCCCCCCCCCCCCCCC--CCCCCHHHHHHCCCCEEEEEEECCCCCCCCC
Q ss_conf 8205--6138996789999---9980---699974333223247997--8998357752059973999854189999989
Q 002481 267 RSAL--FQAGPNLWAVENF---AAVA---KYPSGQIIGQDLFASGVF--ETATDFQVYTEVAGLSGLDFAYTDKSAVYHT 336 (917)
Q Consensus 267 ~~~l--fq~g~~~~li~~y---~~~a---~~p~~~~l~~e~f~~g~i--ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT 336 (917)
.... +.. +.+ +.+.. .+.. ............|..... ...|||.+|.+ .|||++++......+.|||
T Consensus 223 ~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt 299 (329)
T 2afw_A 223 PTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHT 299 (329)
T ss_dssp CCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred CCEEEECCC-CCH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-CCCCEEEEECCCCCCCCCC
T ss_conf 764455167-535-8899999999999728866787421012344569998898774897-7998899976888877889
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6898379998899999999999999986
Q 002481 337 KNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (917)
Q Consensus 337 ~~Dt~d~I~~~sLq~~g~~vl~~v~~la 364 (917)
++||+++++++++++.++.+..++.+..
T Consensus 300 ~~Dt~~~ld~~~l~~~~~~~~~~v~eyl 327 (329)
T 2afw_A 300 MDDNEENLDESTIDNLNKILQVFVLEYL 327 (329)
T ss_dssp TTCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8776244899999999999999999985
No 10
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=1.00 E-value=1 Score=259.07 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=202.0
Q ss_pred CCCCHHHHHHHHHHHHCC-----CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 999899999999998717-----998899988999999999999830313588511999977326897434543235710
Q 002481 82 RGFSELEAMKHVKALTQL-----GPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (917)
Q Consensus 82 ~~fs~erA~~~L~~L~~i-----gpR~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~~ 156 (917)
++++.++++++|++|+++ ++|..+++++.++++||.++++++| .+++++.+...
T Consensus 2 ~~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~--------------- 60 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSG--------------- 60 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEET---------------
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEECCC---------------
T ss_conf 968999999999999702346898877898779999999999999769------85899975148---------------
Q ss_pred CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
Q ss_conf 11036254999983788898998779997305665799998897259999999999998528989962999980876789
Q 002481 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (917)
Q Consensus 157 ~~y~~~~NII~~i~g~~~~~~~~~~ILi~aH~DSv~~spGA~Dd~sgva~lLEi~r~L~~~~~~~~~~I~Flf~~~EE~g 236 (917)
..+..||+++++|+ .+++.|+++||+|+|+.++||.||++|++++||++|.|.+.+.+++++|+|+|+++||.|
T Consensus 61 --~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g 134 (284)
T 1tkj_A 61 --GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELG 134 (284)
T ss_dssp --TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred --CCCCEEEEEEEECC----CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
T ss_conf --88740499997178----999779999645778999997567499999999999999669999843999998871147
Q ss_pred CCCHHHHHHCCCC--CCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 7665889840997--57940899950476799820561389967899999980699974333223247997899835775
Q 002481 237 LNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVY 314 (917)
Q Consensus 237 l~GS~~f~~~h~~--a~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F 314 (917)
+.||+.++++++. .+++.++||+|+.|.++....+. +.++.+.+.+.+.++. .+.. ..... .-..+|||.+|
T Consensus 135 ~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~f 208 (284)
T 1tkj_A 135 LIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAPF 208 (284)
T ss_dssp SHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHHH
T ss_pred CCCHHHHHHHCCCCHHHCEEEEEEECCCCCCCCCEEEE-CCCHHHHHHHHHHHHH-CCCC--CCCCC--CCCCCCCHHHH
T ss_conf 75889998637610033489999955787788873896-6877899999999987-6998--50278--89999933989
Q ss_pred HHCCCCEEEEEEECC-------------------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 205997399985418-------------------99999896898379998899999999999999986399999
Q 002481 315 TEVAGLSGLDFAYTD-------------------KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIP 370 (917)
Q Consensus 315 ~~~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~I~~~sLq~~g~~vl~~v~~la~s~~l~ 370 (917)
.+ .|||++.+.... ..++|||+.|++++++++.+++.++.+..+++.+++++.+|
T Consensus 209 ~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 209 KN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp HH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HH-CCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 97-899889845476433431000001345566789999998677101899999999999999999996489899
Done!