BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002487
(916 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GZQ3|PNP1_ARATH Polyribonucleotide nucleotidyltransferase 1, chloroplastic
OS=Arabidopsis thaliana GN=PNP1 PE=1 SV=1
Length = 922
Score = 1247 bits (3227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/907 (71%), Positives = 739/907 (81%), Gaps = 17/907 (1%)
Query: 17 HSS--HFSLSARCKLSLSSNCPRF--STSQKSSKFRSLSLLLSRRKYSERFSVRASATGP 72
HSS F R KL S N PRF + SL L + +FSVRA
Sbjct: 10 HSSTPQFWPLRRSKLCRSRNFPRFHSGERSSGGGGKLCSLSLLSGSGAGKFSVRALVRPD 69
Query: 73 EVSEP-VLSDALPSFPQPVSVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCL 131
+ + + D +FP VSVKIPFG+R+ILVETG MGRQAS AVTVTDGETI+YTSVCL
Sbjct: 70 DTDDADSVGDGSLAFPNHVSVKIPFGNREILVETGLMGRQASSAVTVTDGETIVYTSVCL 129
Query: 132 ADVPSEPSDFFPLNVNYQERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKG 191
ADVPSEPSDF PL V+YQERFSA GRTSGGFFKREGRTKDHEVL+CRLIDRPLRPT+ KG
Sbjct: 130 ADVPSEPSDFLPLYVHYQERFSAVGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMPKG 189
Query: 192 FYHETQILSWVLSYDGLHFPDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPT 251
FY+ETQILSWVLSYDGLH PDALAVT+AGIAVALSEVPN+K IAGVRVGL+G +FIVNPT
Sbjct: 190 FYNETQILSWVLSYDGLHAPDALAVTSAGIAVALSEVPNAKAIAGVRVGLIGGEFIVNPT 249
Query: 252 TQEMEDSQLDLLLAGSDDAILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMC 311
+EME+SQLDL LAG+D AIL IEGY +FL EEML+QAV+VGQDAV+ ++ L +
Sbjct: 250 VKEMEESQLDLFLAGTDTAILTIEGYSNFLPEEMLLQAVKVGQDAVQATCIAIEVLAKKY 309
Query: 312 GKPKMLDTIKLPPPELYKHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGY 371
GKPKMLD I+LPPPELYKHV+E+AGEEL K LQIK+KI RRKA+SSLEEKVLTIL+E GY
Sbjct: 310 GKPKMLDAIRLPPPELYKHVKELAGEELTKALQIKSKISRRKAISSLEEKVLTILTEKGY 369
Query: 372 VSKDETVGIVETIPDLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVF 431
V + G +E PDLLEDEDEDEEVV +GEVD+GDVHI+P RK P+LFSEVDVKLVF
Sbjct: 370 VIDEVAFGTIEAQPDLLEDEDEDEEVVPEGEVDQGDVHIRPIPRKPIPLLFSEVDVKLVF 429
Query: 432 KEVTSKFLRRRIVEGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLG 491
KEV+SK LRRRIVEGG+RSDGR D IRPI+SRCGLLPRAHGS LFTRGETQ+LAV+TLG
Sbjct: 430 KEVSSKLLRRRIVEGGKRSDGRTLDEIRPINSRCGLLPRAHGSTLFTRGETQALAVVTLG 489
Query: 492 DKQMAQRIDNLESDDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLP 551
DKQMAQRIDNLE DE KRFYLQY+FPPSSVGEVGRIGAPSRREIGHGTLAERALE +LP
Sbjct: 490 DKQMAQRIDNLEGSDEYKRFYLQYTFPPSSVGEVGRIGAPSRREIGHGTLAERALETILP 549
Query: 552 SDNDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFG 611
SD+DFPYTIRVEST+ ESNGSSSMASVCGGCLALQDAGVP+KCS+AG+AMGMV DT+EFG
Sbjct: 550 SDDDFPYTIRVESTVIESNGSSSMASVCGGCLALQDAGVPVKCSVAGIAMGMVWDTEEFG 609
Query: 612 GDGTPLILSDITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGR 671
GDG+PLILSDITG+EDASGDMDFKVAGNEDG+TAFQMDIKVGGITL +M+KAL QAK GR
Sbjct: 610 GDGSPLILSDITGAEDASGDMDFKVAGNEDGVTAFQMDIKVGGITLEIMEKALIQAKAGR 669
Query: 672 RHILAEMLKCSPPPSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDT 731
RHILAEM KCSPPP+ SLSK+APLI IMKV P K+ +IGSGGKKVKSIIEE+GVEAID
Sbjct: 670 RHILAEMAKCSPPPTLSLSKYAPLILIMKVHPSKVYSLIGSGGKKVKSIIEESGVEAIDM 729
Query: 732 EDDGTVKITAKDLSSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGL 791
+DDGTVKI A D++SLE++KAIIS LTMVP+VGDIYRNCEIKS+APYG FVEIAPGREGL
Sbjct: 730 QDDGTVKIMAIDVASLERAKAIISGLTMVPSVGDIYRNCEIKSMAPYGAFVEIAPGREGL 789
Query: 792 CHISELSSNWLAKAEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAENPPVK-LPT 850
CHISELS+ WLAK ED KVGD +DVKLIEVN+KGQLRLS RALLPE++ + K P
Sbjct: 790 CHISELSAEWLAKPEDAYKVGDRIDVKLIEVNEKGQLRLSVRALLPESETDKDSQKQQPA 849
Query: 851 GDPTKDAAASDKLVGSPK--------PKGSSSEDTVLPHKKVKVFKRPASPAKDRPYSNK 902
GD TKD ++ K V + K SS ++ VL K V +R + D+ ++
Sbjct: 850 GDSTKDKSSQRKYVNTSSKDRAAAGASKVSSGDELVLKKKDV---RRATGGSSDKTMNSN 906
Query: 903 DRTKKSS 909
T + S
Sbjct: 907 SSTNEES 913
>sp|Q69LE7|PNP1_ORYSJ Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
OS=Oryza sativa subsp. japonica GN=PNP1 PE=2 SV=1
Length = 902
Score = 1215 bits (3143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/778 (76%), Positives = 682/778 (87%), Gaps = 1/778 (0%)
Query: 87 PQPVSVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNV 146
P S KIP GDR ILVETGH+GRQAS +V VTDGETI+Y+SVCLAD P++PSDFFP++V
Sbjct: 87 PTKFSTKIPVGDRHILVETGHIGRQASASVMVTDGETIVYSSVCLADTPNDPSDFFPMSV 146
Query: 147 NYQERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYD 206
+YQER SAAGRTSGGFFKREGR KDHEVLVCRLIDRPLRPT+ KGFY+ETQILSWV SYD
Sbjct: 147 HYQERLSAAGRTSGGFFKREGRAKDHEVLVCRLIDRPLRPTMPKGFYYETQILSWVFSYD 206
Query: 207 GLHFPDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAG 266
G+H PD+LA+TAAG+A+ALSEVPN + IAGVRVG++ D+F+VNPTT++M+DS+LDL++AG
Sbjct: 207 GIHSPDSLAITAAGVAMALSEVPNKQTIAGVRVGMINDQFVVNPTTEQMDDSELDLVMAG 266
Query: 267 SDDAILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPE 326
+D AILMIEGYCDFL+EE L+QAV+ GQ A+REI + LV+ CGK KM D I LPPPE
Sbjct: 267 TDSAILMIEGYCDFLTEEKLLQAVETGQGAIREICKAIDGLVQKCGKKKMFDAIDLPPPE 326
Query: 327 LYKHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPD 386
LY+HVE+I+G+ELVK LQIK KI RRKALS+LEEKV+TILSE GYV+KDE+ G+ E + D
Sbjct: 327 LYRHVEDISGDELVKALQIKEKILRRKALSALEEKVITILSEQGYVAKDESSGVSENLAD 386
Query: 387 LLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEG 446
++E+EDEDE +V GEVDEG+VHIKP SRK LFSEVDVKLVFKEV+SKFLRRRIVEG
Sbjct: 387 VIEEEDEDEVIVD-GEVDEGEVHIKPVSRKPPRQLFSEVDVKLVFKEVSSKFLRRRIVEG 445
Query: 447 GRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDD 506
G+RSDGR +RPI+S+CGLLPRAHGSALFTRGETQ+LAV+TLGD QMAQRIDNL +
Sbjct: 446 GKRSDGRSPCELRPINSQCGLLPRAHGSALFTRGETQALAVVTLGDYQMAQRIDNLVDTE 505
Query: 507 EVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTI 566
E K FYLQY+FPPSSVGEVGRIGAP+RREIGHG LAERALEP+LP + DFPYTIRVESTI
Sbjct: 506 ESKSFYLQYTFPPSSVGEVGRIGAPNRREIGHGMLAERALEPILPPEEDFPYTIRVESTI 565
Query: 567 TESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSE 626
TESNGSSSMASVCGGCLALQDAGVPIK +AG+AMG+VLDT EFGGDG PLILSDITG+E
Sbjct: 566 TESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTLEFGGDGKPLILSDITGAE 625
Query: 627 DASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPS 686
DASGDMDFKVAGNE+GI+AFQMDIKV GITLP+M+ AL QA+DGR+HIL EM KCSPPP+
Sbjct: 626 DASGDMDFKVAGNENGISAFQMDIKVVGITLPIMEHALLQARDGRKHILNEMSKCSPPPA 685
Query: 687 NSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSS 746
LS +APLIH+MKVKP K+NLIIGSGGK +KSIIEETGV+AIDT DDGTVKITA+DLSS
Sbjct: 686 KVLSPYAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKITARDLSS 745
Query: 747 LEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAE 806
LEKSKAII+NLTMVP VG+IYRNCEIK+IAPYG FVEIAPGREGLCHISELSS+WLAKAE
Sbjct: 746 LEKSKAIIANLTMVPKVGEIYRNCEIKTIAPYGAFVEIAPGREGLCHISELSSSWLAKAE 805
Query: 807 DVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAENPPVKLPTGDPTKDAAASDKLV 864
D KVGD +DVKLIE+NDKGQLRLS RALLP+A+ E+ + G + A D LV
Sbjct: 806 DAFKVGDRIDVKLIEINDKGQLRLSSRALLPDANQESSSKQQAGGSTREKAPQKDNLV 863
>sp|Q3KKJ7|PNP_CHLTA Polyribonucleotide nucleotidyltransferase OS=Chlamydia trachomatis
serovar A (strain HAR-13 / ATCC VR-571B) GN=pnp PE=3
SV=1
Length = 695
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/741 (48%), Positives = 470/741 (63%), Gaps = 58/741 (7%)
Query: 98 DRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAAGR 157
D+ ++ ETG + RQASGA+ V ET +++S C A + SE DF P V+YQE+FS+AGR
Sbjct: 13 DKTLIFETGKIARQASGAILVKMNETWVFSSACAASL-SEAVDFLPFRVDYQEKFSSAGR 71
Query: 158 TSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALAVT 217
TSGGF KREGR + E+LV RLIDR LRP+ + Q+LS+V SYDG PD LA+
Sbjct: 72 TSGGFLKREGRPSEREILVSRLIDRSLRPSFPNRLMQDIQVLSYVWSYDGKTLPDPLAIC 131
Query: 218 AAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIEGY 277
A A+A+SEVP + +IAGVRVGLVG K+++NPT E+ S+LDL++AG+ A+LMIEG+
Sbjct: 132 GASAALAISEVPQNCIIAGVRVGLVGGKWVINPTRDELSASKLDLVMAGTASAVLMIEGH 191
Query: 278 CDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEEIAGE 337
CDFL+EE +++A+ GQ + +I + ++A + GK K + P ++ V + E
Sbjct: 192 CDFLTEEQVLEAIAFGQTYIAKICDAIEAWQKATGKQKNFSAVLDMPEDVQNVVSDFIRE 251
Query: 338 ELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDEDEEV 397
+ K L ++K +A LEE V I +L+++E+ D
Sbjct: 252 KFEKALSFRDKEALEQASKELEESV---------------------IANLVQEENSD--- 287
Query: 398 VVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGRFADG 457
FS ++VK FK S +R I + G R DGR
Sbjct: 288 ------------------------FSLLNVKAAFKTAKSNQMRALIQDLGIRVDGRTTTE 323
Query: 458 IRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYLQYSF 517
IRPIS LPR HGS LFTRGETQS+AV TLG + MAQR ++L D RFYLQY F
Sbjct: 324 IRPISIETPFLPRTHGSCLFTRGETQSMAVCTLGGENMAQRFEDLNGDG-AARFYLQYFF 382
Query: 518 PPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSSSMAS 577
PP SVGEVGRIG+P RREIGHG LAE+AL VLP + FPY IR+ES ITESNGSSSMAS
Sbjct: 383 PPFSVGEVGRIGSPGRREIGHGKLAEKALSHVLPETSRFPYIIRLESNITESNGSSSMAS 442
Query: 578 VCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMDFKVA 637
VCGGCLAL DAGVPIK +AG+AMG++LD D+ +ILSDI+G ED GDMDFKVA
Sbjct: 443 VCGGCLALMDAGVPIKAPVAGIAMGLILDRDQ------AIILSDISGIEDHLGDMDFKVA 496
Query: 638 GNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHAPLIH 697
G GITAFQMDIK+ GIT +M++AL QAK GR HIL M + P ++SK+AP I
Sbjct: 497 GTAKGITAFQMDIKIEGITHKIMEQALAQAKQGRSHILNLMTQVLASPKGTVSKYAPRIE 556
Query: 698 IMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNL 757
M++ KI +IG GGK+++ IIE +G + +D DDG + I A S+ K+K +I L
Sbjct: 557 TMQINTSKIATVIGPGGKQIRQIIERSGAQ-VDINDDGVINIAASTQESINKAKELIEGL 615
Query: 758 TMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDV 817
T VG +Y N + SIA +GVFVE+ PG+EGLCHISELS + D VK GD + V
Sbjct: 616 TGEVEVGKVY-NGRVTSIATFGVFVEVLPGKEGLCHISELSKQKVDNISDFVKEGDKLAV 674
Query: 818 KLIEVNDKGQLRLSRRALLPE 838
KL+ +N+KGQL+LS +A L +
Sbjct: 675 KLLSINEKGQLKLSHKATLED 695
>sp|B0BAV0|PNP_CHLTB Polyribonucleotide nucleotidyltransferase OS=Chlamydia trachomatis
serovar L2b (strain UCH-1/proctitis) GN=pnp PE=3 SV=1
Length = 695
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/741 (48%), Positives = 470/741 (63%), Gaps = 58/741 (7%)
Query: 98 DRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAAGR 157
D+ ++ ETG + RQASGAV V ET +++S C A + SE F P V+YQE+FS+AGR
Sbjct: 13 DKTLIFETGKIARQASGAVLVKMNETWVFSSACAASL-SEAVGFLPFRVDYQEKFSSAGR 71
Query: 158 TSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALAVT 217
TSGGF KREGR + E+LV RLIDR LRP+ + Q+LS+V SYDG PD LA+
Sbjct: 72 TSGGFLKREGRPSEREILVSRLIDRSLRPSFPNRLMQDIQVLSYVWSYDGKTLPDPLAIC 131
Query: 218 AAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIEGY 277
A A+A+SEVP + +IAGVRVGLVG K+++NPT E+ S+LDL++AG+ A+LMIEG+
Sbjct: 132 GASAALAISEVPQNCIIAGVRVGLVGGKWVINPTRDELSASKLDLVMAGTASAVLMIEGH 191
Query: 278 CDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEEIAGE 337
CDFL+EE +++A+ GQ + +I + ++A + GK K + P ++ V + E
Sbjct: 192 CDFLTEEQVLEAIAFGQTYIAKICDAIEAWQKAIGKQKNFSAVLDMPEDVQNVVSDFIRE 251
Query: 338 ELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDEDEEV 397
+ K L ++K +A LEE V I +L+++E+ D
Sbjct: 252 KFEKALSFRDKEALEQASKELEESV---------------------IANLVQEENSD--- 287
Query: 398 VVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGRFADG 457
FS ++VK FK S +R I + G R DGR
Sbjct: 288 ------------------------FSLLNVKAAFKTAKSNQMRALIQDLGIRVDGRTTTE 323
Query: 458 IRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYLQYSF 517
IRPIS LLPR HGS LFTRGETQS+AV TLG + MAQR ++L D RFYLQY F
Sbjct: 324 IRPISIETPLLPRTHGSCLFTRGETQSMAVCTLGGENMAQRFEDLNGDG-AARFYLQYFF 382
Query: 518 PPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSSSMAS 577
PP SVGEVGRIG+P RREIGHG LAE+AL VLP + FPY IR+ES ITESNGSSSMAS
Sbjct: 383 PPFSVGEVGRIGSPGRREIGHGKLAEKALSHVLPETSRFPYIIRLESNITESNGSSSMAS 442
Query: 578 VCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMDFKVA 637
VCGGCLAL DAGVPIK +AG+AMG++LD D+ +ILSDI+G ED GDMDFKVA
Sbjct: 443 VCGGCLALMDAGVPIKAPVAGIAMGLILDRDQ------AIILSDISGIEDHLGDMDFKVA 496
Query: 638 GNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHAPLIH 697
G GITAFQMDIK+ GIT +M++AL QAK GR HIL M + P ++SK+AP I
Sbjct: 497 GTAKGITAFQMDIKIEGITHKIMEQALAQAKQGRSHILNLMTQVLASPKGTVSKYAPRIE 556
Query: 698 IMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNL 757
M++ KI +IG GGK+++ IIE +G + +D DDG + I A S+ K+K +I L
Sbjct: 557 TMQINTSKIATVIGPGGKQIRQIIERSGAQ-VDINDDGVINIAASTQESINKAKELIEGL 615
Query: 758 TMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDV 817
T VG +Y N + SIA +GVFVE+ PG+EGLCHISELS + D VK GD + V
Sbjct: 616 TGEVEVGKVY-NGRVTSIATFGVFVEVLPGKEGLCHISELSKQKVDNISDFVKEGDKLAV 674
Query: 818 KLIEVNDKGQLRLSRRALLPE 838
KL+ +N+KGQL+LS +A L +
Sbjct: 675 KLLSINEKGQLKLSHKATLED 695
>sp|B0B971|PNP_CHLT2 Polyribonucleotide nucleotidyltransferase OS=Chlamydia trachomatis
serovar L2 (strain 434/Bu / ATCC VR-902B) GN=pnp PE=3
SV=1
Length = 695
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/741 (48%), Positives = 470/741 (63%), Gaps = 58/741 (7%)
Query: 98 DRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAAGR 157
D+ ++ ETG + RQASGAV V ET +++S C A + SE F P V+YQE+FS+AGR
Sbjct: 13 DKTLIFETGKIARQASGAVLVKMNETWVFSSACAASL-SEAVGFLPFRVDYQEKFSSAGR 71
Query: 158 TSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALAVT 217
TSGGF KREGR + E+LV RLIDR LRP+ + Q+LS+V SYDG PD LA+
Sbjct: 72 TSGGFLKREGRPSEREILVSRLIDRSLRPSFPNRLMQDIQVLSYVWSYDGKTLPDPLAIC 131
Query: 218 AAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIEGY 277
A A+A+SEVP + +IAGVRVGLVG K+++NPT E+ S+LDL++AG+ A+LMIEG+
Sbjct: 132 GASAALAISEVPQNCIIAGVRVGLVGGKWVINPTRDELSASKLDLVMAGTASAVLMIEGH 191
Query: 278 CDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEEIAGE 337
CDFL+EE +++A+ GQ + +I + ++A + GK K + P ++ V + E
Sbjct: 192 CDFLTEEQVLEAIAFGQTYIAKICDAIEAWQKAIGKQKNFSAVLDMPEDVQNVVSDFIRE 251
Query: 338 ELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDEDEEV 397
+ K L ++K +A LEE V I +L+++E+ D
Sbjct: 252 KFEKALSFRDKEALEQASKELEESV---------------------IANLVQEENSD--- 287
Query: 398 VVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGRFADG 457
FS ++VK FK S +R I + G R DGR
Sbjct: 288 ------------------------FSLLNVKAAFKTAKSNQMRALIQDLGIRVDGRTTTE 323
Query: 458 IRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYLQYSF 517
IRPIS LLPR HGS LFTRGETQS+AV TLG + MAQR ++L D RFYLQY F
Sbjct: 324 IRPISIETPLLPRTHGSCLFTRGETQSMAVCTLGGENMAQRFEDLNGDG-AARFYLQYFF 382
Query: 518 PPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSSSMAS 577
PP SVGEVGRIG+P RREIGHG LAE+AL VLP + FPY IR+ES ITESNGSSSMAS
Sbjct: 383 PPFSVGEVGRIGSPGRREIGHGKLAEKALSHVLPETSRFPYIIRLESNITESNGSSSMAS 442
Query: 578 VCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMDFKVA 637
VCGGCLAL DAGVPIK +AG+AMG++LD D+ +ILSDI+G ED GDMDFKVA
Sbjct: 443 VCGGCLALMDAGVPIKAPVAGIAMGLILDRDQ------AIILSDISGIEDHLGDMDFKVA 496
Query: 638 GNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHAPLIH 697
G GITAFQMDIK+ GIT +M++AL QAK GR HIL M + P ++SK+AP I
Sbjct: 497 GTAKGITAFQMDIKIEGITHKIMEQALAQAKQGRSHILNLMTQVLASPKGTVSKYAPRIE 556
Query: 698 IMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNL 757
M++ KI +IG GGK+++ IIE +G + +D DDG + I A S+ K+K +I L
Sbjct: 557 TMQINTSKIATVIGPGGKQIRQIIERSGAQ-VDINDDGVINIAASTQESINKAKELIEGL 615
Query: 758 TMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDV 817
T VG +Y N + SIA +GVFVE+ PG+EGLCHISELS + D VK GD + V
Sbjct: 616 TGEVEVGKVY-NGRVTSIATFGVFVEVLPGKEGLCHISELSKQKVDNISDFVKEGDKLAV 674
Query: 818 KLIEVNDKGQLRLSRRALLPE 838
KL+ +N+KGQL+LS +A L +
Sbjct: 675 KLLSINEKGQLKLSHKATLED 695
>sp|O84849|PNP_CHLTR Polyribonucleotide nucleotidyltransferase OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=pnp PE=3 SV=1
Length = 695
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/741 (48%), Positives = 470/741 (63%), Gaps = 58/741 (7%)
Query: 98 DRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAAGR 157
D+ ++ ETG + RQASGAV V ET +++S C A + SE DF P V+YQE+FS+AGR
Sbjct: 13 DKTLIFETGKIARQASGAVLVKMNETWVFSSACAASL-SEAVDFLPFRVDYQEKFSSAGR 71
Query: 158 TSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALAVT 217
TSGGF KREGR + E+LV RL+DR LRP+ + Q+LS+V SYDG PD LA+
Sbjct: 72 TSGGFLKREGRPSEREILVSRLMDRSLRPSFPNRLMQDIQVLSYVWSYDGKTLPDPLAIC 131
Query: 218 AAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIEGY 277
A A+A+SEVP + ++AGVRVGLVG K+++NPT E+ S+LDL++AG+ A+LMIEG+
Sbjct: 132 GASAALAISEVPQNCIVAGVRVGLVGGKWVINPTRDELSASKLDLVMAGTASAVLMIEGH 191
Query: 278 CDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEEIAGE 337
CDFL+EE +++A+ GQ + +I + ++A + GK K + P ++ V + E
Sbjct: 192 CDFLTEEQVLEAIAFGQTYIAKICDAIEAWQKAIGKQKNFSAVLDMPEDVQNVVSDFIRE 251
Query: 338 ELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDEDEEV 397
+ K L ++K +A LEE V I +L+++E+ D
Sbjct: 252 KFEKALSFRDKEALEQASKELEESV---------------------IANLVQEENSD--- 287
Query: 398 VVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGRFADG 457
FS ++VK FK S +R I + G R DGR
Sbjct: 288 ------------------------FSLLNVKAAFKTAKSNQMRALIQDLGIRVDGRTTTE 323
Query: 458 IRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYLQYSF 517
IRPIS LPR HGS LFTRGETQS+AV TLG + MAQR ++L D RFYLQY F
Sbjct: 324 IRPISIETPFLPRTHGSCLFTRGETQSMAVCTLGGENMAQRFEDLNGDG-AARFYLQYFF 382
Query: 518 PPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSSSMAS 577
PP SVGEVGRIG+P RREIGHG LAE+AL VLP + FPY IR+ES ITESNGSSSMAS
Sbjct: 383 PPFSVGEVGRIGSPGRREIGHGKLAEKALSHVLPETSRFPYIIRLESNITESNGSSSMAS 442
Query: 578 VCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMDFKVA 637
VCGGCLAL DAGVPIK +AG+AMG++LD D+ +ILSDI+G ED GDMDFKVA
Sbjct: 443 VCGGCLALMDAGVPIKAPVAGIAMGLILDRDQ------AIILSDISGIEDHLGDMDFKVA 496
Query: 638 GNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHAPLIH 697
G GITAFQMDIK+ GIT +M++AL QAK GR HIL M + P ++SK+AP I
Sbjct: 497 GTAKGITAFQMDIKIEGITHKIMEQALAQAKQGRSHILNLMTQVLASPKGTVSKYAPRIE 556
Query: 698 IMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNL 757
M++ KI +IG GGK+++ IIE +G + +D DDG + I A S+ K+K +I L
Sbjct: 557 TMQINTSKIATVIGPGGKQIRQIIERSGAQ-VDINDDGVINIAASTQESINKAKELIEGL 615
Query: 758 TMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDV 817
T VG +Y N + SIA +GVFVE+ PG+EGLCHISELS + D VK GD + V
Sbjct: 616 TGEVEVGKVY-NGRVTSIATFGVFVEVLPGKEGLCHISELSKQKVDNISDFVKEGDKLAV 674
Query: 818 KLIEVNDKGQLRLSRRALLPE 838
KL+ +N+KGQL+LS +A L +
Sbjct: 675 KLLSINEKGQLKLSHKATLED 695
>sp|A8IGA3|PNP_AZOC5 Polyribonucleotide nucleotidyltransferase OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=pnp PE=3 SV=2
Length = 724
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 330/744 (44%), Positives = 457/744 (61%), Gaps = 57/744 (7%)
Query: 93 KIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERF 152
++ +G R +++ETG M RQA GAV + G+T + +V A P DFFPL VNYQE+
Sbjct: 8 ELDWGGRTLVLETGKMARQADGAVFASYGDTTVLATVVSAREPKPGQDFFPLTVNYQEKT 67
Query: 153 SAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPD 212
AAGR GG+FKREGR + E LV RLIDRP+RP G+ ++TQ++ VL++D + PD
Sbjct: 68 YAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFADGYKNDTQVVVTVLAHDLENDPD 127
Query: 213 ALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAIL 272
L++ AA A+ LS VP I G RVG VGD++++NPT +E++DS LDL++AG+ DA+L
Sbjct: 128 VLSMVAASAALTLSGVPFMGPIGGARVGFVGDEYVLNPTIEELKDSALDLVVAGTSDAVL 187
Query: 273 MIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKHV 331
M+E LSEE+++ AV G + + + L E K P+ + + L +
Sbjct: 188 MVESEAKELSEEVMLGAVMFGHRHFQPVIEAIIRLAEKAAKEPRPFEPVDHSA--LEAKI 245
Query: 332 EEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDE 391
EIA +L +IK K R +A+ + + KV
Sbjct: 246 REIAEADLRAAYKIKQKQARYEAVGAAKSKVKKYF------------------------- 280
Query: 392 DEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSD 451
E++ +DG+ PK++ DV V K + +K +R I++ G R D
Sbjct: 281 ---EQLAIDGQE-------APKAQ----------DVAEVLKGLEAKIVRWAILDDGIRID 320
Query: 452 GRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRF 511
GR +RPI S G+LPRAHGSALFTRGETQ+L V TLG + Q ID+LE + + F
Sbjct: 321 GRDVKTVRPIVSEVGILPRAHGSALFTRGETQALVVATLGTGEDEQFIDSLEGTYK-EHF 379
Query: 512 YLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNG 571
L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ ++FPYT+RV S I ESNG
Sbjct: 380 LLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAKHEFPYTLRVVSEILESNG 439
Query: 572 SSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGD 631
SSSMA+VCG L+L DAGVP+K +AG+AMG++L+ ++F +LSDI G ED GD
Sbjct: 440 SSSMATVCGTSLSLMDAGVPLKSPVAGIAMGLILEGEKFA------VLSDILGDEDHLGD 493
Query: 632 MDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSK 691
MDFKVAG E G+TA QMDIK+ GIT +MK AL QAKDGR HIL EM K L +
Sbjct: 494 MDFKVAGTESGVTALQMDIKIAGITEEIMKVALAQAKDGRAHILGEMSKALTSARAELGE 553
Query: 692 HAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSK 751
HAP I +MK+ +KI +IGSGGK ++ I+E+TG + I+ EDDGT+KI + S++ +
Sbjct: 554 HAPRIEVMKIAVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTIKIASASGDSIKAAI 612
Query: 752 AIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKV 811
I ++ P VG IY +K + +G FV ++GL HIS+LS +AK+ DVVK
Sbjct: 613 NWIKSIASEPEVGAIYDGTVVK-VVDFGAFVNFFGSKDGLVHISQLSKERVAKSSDVVKE 671
Query: 812 GDLVDVKLIEVNDKGQLRLSRRAL 835
GD V VKL+ +++G+ RLS +A+
Sbjct: 672 GDKVKVKLVGFDERGKTRLSMKAV 695
>sp|A0LE14|PNP_MAGSM Polyribonucleotide nucleotidyltransferase OS=Magnetococcus sp.
(strain MC-1) GN=pnp PE=3 SV=1
Length = 701
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/743 (42%), Positives = 460/743 (61%), Gaps = 57/743 (7%)
Query: 94 IPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFS 153
+ FG++ I +ETG + RQA+GAV VT G+T++ + DFFPL+V+YQE+F
Sbjct: 9 VQFGEKTITLETGRVARQANGAVMVTYGDTVVLVTAVAETSMRAGQDFFPLSVHYQEKFW 68
Query: 154 AAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDA 213
AAG+ GGF KRE R + EVL RLIDRP+RP KGF +ETQ+++ VLSYD + D
Sbjct: 69 AAGKIPGGFIKRETRPSEREVLTSRLIDRPIRPLFPKGFMNETQVVAQVLSYDPDYPSDI 128
Query: 214 LAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILM 273
A+ A+ALS VP I G RVG + K ++NPT ++ S+LDL++AG+ A+ M
Sbjct: 129 AALIGCSAALALSGVPFEGPIGGARVGFIDGKPVLNPTVDQLAASRLDLVVAGTRSAVTM 188
Query: 274 IEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPK-MLDTIKLPPPELYKHVE 332
+E DFLSE+ ++ V ++ + + ++ LV GKP+ +++ +++ L + +
Sbjct: 189 VESEVDFLSEDEMLDCVMFAHESFQPVITAIEELVAEAGKPRWVVEPVQVNEALLAEMND 248
Query: 333 EIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDED 392
+ A ++ + I K+ R +A++ ++ + E +G +E
Sbjct: 249 KFAA-QVTEAYAIPEKMARYEAVAQVKAAAM------------EALGTIE---------- 285
Query: 393 EDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDG 452
VDG+ S K + +V +FK++ S+ LR+ +++ G+R DG
Sbjct: 286 ------VDGQ-----------SVKRSE------EVASLFKKIESRTLRQNVLQ-GKRVDG 321
Query: 453 RFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFY 512
R IRPI+ +LPR HG+ALFTRGETQ++A +TLG + Q ++ L S + RFY
Sbjct: 322 RGLTDIRPIACEVSILPRVHGTALFTRGETQAIATVTLGTSRDEQIVETL-SGEYRDRFY 380
Query: 513 LQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGS 572
L Y+FPP VGE GR+GAP RREIGHG LA RAL ++PS FPYT+R+ S ITESNGS
Sbjct: 381 LNYTFPPYCVGETGRMGAPGRREIGHGKLATRALTAIVPSAEVFPYTLRITSEITESNGS 440
Query: 573 SSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDM 632
SSMA+VCG LA+QDAGVPIK +AG+AMG+V + D + +LSDI G ED GDM
Sbjct: 441 SSMATVCGAVLAMQDAGVPIKAPVAGIAMGLVKEGDAYA------VLSDILGDEDHLGDM 494
Query: 633 DFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKH 692
DFKVAGN DGITA QMDIK+ GIT +M KAL+QA+ GR HIL EM K +S +
Sbjct: 495 DFKVAGNADGITALQMDIKITGITREIMAKALEQARAGRLHILGEMGKAMTTHRAEMSAY 554
Query: 693 APLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKA 752
AP IH MK+ P+KI +IGSGGK ++SI EETG AID EDDGT++I + D +S E++
Sbjct: 555 APRIHTMKIHPDKIREVIGSGGKVIRSITEETGC-AIDIEDDGTIRIASSDQASAEQAVK 613
Query: 753 IISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVG 812
II ++ G +Y ++ I +G FV I P ++GL HIS+L++ + DVVK G
Sbjct: 614 IIKSIVAEVEKGQVYEG-KVVRITDFGAFVNILPNKDGLVHISQLANRRVQNVTDVVKEG 672
Query: 813 DLVDVKLIEVNDKGQLRLSRRAL 835
D+V VK+++V+ +G+++L+ + +
Sbjct: 673 DVVTVKVLDVDRQGRVKLTMKEM 695
>sp|Q13EM2|PNP_RHOPS Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas
palustris (strain BisB5) GN=pnp PE=3 SV=1
Length = 722
Score = 577 bits (1486), Expect = e-163, Method: Compositional matrix adjust.
Identities = 323/746 (43%), Positives = 446/746 (59%), Gaps = 59/746 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLRLETGKVARQADGAVVATYGETVVLATVVAAKTPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP G+ +ETQ++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ A+ A+ LS P I RVG + D++++NP EM ++QLDL++AG+ DA
Sbjct: 126 PDILALVASSAALTLSGAPFKGPIGAARVGFINDEYVLNPVLDEMPETQLDLVVAGTSDA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E LSEE+++ AV G + + + + AL E K P+ L I E K
Sbjct: 186 VLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIALAEKAAKEPRELTVIDDSAIE--K 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ + +EL I K R A+ ++EK +
Sbjct: 244 EMLGLVEQELRAAYAIAVKQERYAAVGKVKEKAIA------------------------- 278
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
H P+ ++ + ++ + VFKE+ +K +R I++ G+R
Sbjct: 279 -------------------HFFPEGQEPK---YDKLRIAGVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR + +R I + G+LPRAHGSALFTRGETQ+L V TLG + Q +D+L + +
Sbjct: 317 IDGRDSKTVRSIIAEAGVLPRAHGSALFTRGETQALVVTTLGTGEDEQYVDSLAGTYK-E 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYTIRV S ITES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIRPVLPPHHEFPYTIRVVSEITES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG LAL DAGVP+K AG+AMG++L+ + F +LSDI G ED
Sbjct: 436 NGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E G+T+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L
Sbjct: 490 GDMDFKVAGTEQGVTSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALDRARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
+HAP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D S++
Sbjct: 550 GEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGESIKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P VG+IY +K + +G FV ++GL HIS+L++ + K DVV
Sbjct: 609 AIKWIKSIASDPEVGEIYEGTVVK-VMEFGAFVNFFGAKDGLVHISQLAAGRVQKTSDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRAL 835
K GD V VKL+ +D+G+ RLS + +
Sbjct: 668 KEGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|B3QAB0|PNP_RHOPT Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas
palustris (strain TIE-1) GN=pnp PE=3 SV=1
Length = 722
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 322/746 (43%), Positives = 447/746 (59%), Gaps = 59/746 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP G+ +ETQ++ VLS+D +
Sbjct: 66 KAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ AA A+ LS VP I RVG + D++++NP EM ++QL+L++AG+ DA
Sbjct: 126 PDVLAMVAASAALTLSGVPFKGPIGAARVGFINDEYVLNPVLDEMAETQLELVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E LSEE+++ AV G + + + + L E K P+ L + E+ K
Sbjct: 186 VLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIDLAEKAAKEPRELTVVD--DSEIEK 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ + +EL I K R A+ ++EK +
Sbjct: 244 EMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKAIA------------------------- 278
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
H P+ ++ + ++ + VFKE+ +K +R I++ G+R
Sbjct: 279 -------------------HFFPEGQEPK---YDKLRIAGVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR + +R I ++ G+LPR HGSALFTRGETQ+L V TLG + Q +D+L S +
Sbjct: 317 IDGRDSKTVRNILAQVGVLPRTHGSALFTRGETQALVVTTLGTGEDEQYVDSL-SGTYKE 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYTIRV S ITES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHHEFPYTIRVVSEITES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG LAL DAGVP+K AG+AMG++L+ + F +LSDI G ED
Sbjct: 436 NGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L
Sbjct: 490 GDMDFKVAGTEQGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALDRARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
+HAP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D S++
Sbjct: 550 GEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGESIKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P +G+IY +K + +G FV ++GL HIS+L++ + K DVV
Sbjct: 609 AIKWIKSIASDPEIGEIYEGTVVK-VMEFGAFVNFFGAKDGLVHISQLAAGRVQKTSDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRAL 835
K GD V VKL+ +D+G+ RLS + +
Sbjct: 668 KEGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|Q6NCN8|PNP_RHOPA Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=pnp PE=3 SV=1
Length = 722
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 322/746 (43%), Positives = 447/746 (59%), Gaps = 59/746 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP G+ +ETQ++ VLS+D +
Sbjct: 66 KAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ AA A+ LS VP I RVG + D++++NP EM ++QL+L++AG+ DA
Sbjct: 126 PDVLAMVAASAALTLSGVPFKGPIGAARVGFINDEYVLNPVLDEMAETQLELVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E LSEE+++ AV G + + + + L E K P+ L + E+ K
Sbjct: 186 VLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIDLAEKAAKEPRELTVVD--DSEIEK 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ + +EL I K R A+ ++EK +
Sbjct: 244 EMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKAIA------------------------- 278
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
H P+ ++ + ++ + VFKE+ +K +R I++ G+R
Sbjct: 279 -------------------HFFPEGQEPK---YDKLRIAGVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR + +R I ++ G+LPR HGSALFTRGETQ++ V TLG + Q +D+L S +
Sbjct: 317 IDGRDSKTVRNILAQVGVLPRTHGSALFTRGETQAMVVTTLGTGEDEQYVDSL-SGTYKE 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYTIRV S ITES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHHEFPYTIRVVSEITES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG LAL DAGVP+K AG+AMG++L+ + F +LSDI G ED
Sbjct: 436 NGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L
Sbjct: 490 GDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALDRARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
+HAP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D S++
Sbjct: 550 GEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGESIKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P VG+IY +K + +G FV ++GL HIS+L++ + K DVV
Sbjct: 609 AIKWIKSIASDPEVGEIYEGTVVK-VMEFGAFVNFFGAKDGLVHISQLAAGRVQKTSDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRAL 835
K GD V VKL+ +D+G+ RLS + +
Sbjct: 668 KEGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|Q2J2J4|PNP_RHOP2 Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas
palustris (strain HaA2) GN=pnp PE=3 SV=1
Length = 718
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 324/746 (43%), Positives = 445/746 (59%), Gaps = 59/746 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GETI+ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKVARQADGAVVATYGETIVLATVVAAKTPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP G+ +ETQ++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ AA A+ LS P I RVG + D++++NP EM ++QL+L++AG+ DA
Sbjct: 126 PDILAMVAASAALTLSGAPFKGPIGAARVGFINDEYVLNPVLDEMPETQLELVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E LSEE+++ AV G + + + + L E K P+ L + + + K
Sbjct: 186 VLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIELAEKAAKEPREL--VVIDDSAIEK 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ + +EL I K R A+ ++EK +
Sbjct: 244 EMLGLVEQELRAAYAIPVKQERYAAVGKVKEKAIA------------------------- 278
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
H P+ + + ++ + VFKE+ +K +R I++ G+R
Sbjct: 279 -------------------HFFPEGEEPK---YDKLRIAGVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR + +R I + G+LPRAHGSALFTRGETQ+L V TLG + Q +D+L + +
Sbjct: 317 IDGRDSKTVRSIIAEAGVLPRAHGSALFTRGETQALVVTTLGTGEDEQYVDSLAGTYK-E 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYTIRV S ITES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIRPVLPPHHEFPYTIRVVSEITES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG LAL DAGVP+K AG+AMG++L+ + F +LSDI G ED
Sbjct: 436 NGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L
Sbjct: 490 GDMDFKVAGTEQGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALDRARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
+HAP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D S++
Sbjct: 550 GEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGESIKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P VG+IY +K + +G FV ++GL HIS+L+S + K DVV
Sbjct: 609 AIKWIKSIASDPEVGEIYEGTVVK-VMEFGAFVNFFGAKDGLVHISQLASGRVQKTSDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRAL 835
K GD V VKL+ +D+G+ RLS R +
Sbjct: 668 KEGDKVKVKLLGFDDRGKTRLSMRVV 693
>sp|Q3SWP5|PNP_NITWN Polyribonucleotide nucleotidyltransferase OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=pnp PE=3
SV=1
Length = 718
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 328/769 (42%), Positives = 455/769 (59%), Gaps = 59/769 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP G+ +ETQ++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPVRPLFADGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ AA A+ LS P I RVG + D++++NPT E+ D+QLDL++AG+ DA
Sbjct: 126 PDILAMVAASAALTLSGAPFKGPIGAARVGFINDEYVLNPTLDEIVDTQLDLVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E LSEE++++AV G + + + + L E K P+ L I E+ K
Sbjct: 186 VLMVESEAKELSEEIMLKAVMFGHRHFQPVIDAIIELAEKAAKEPRELKVID--DTEIEK 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ + ++L I K R A+ ++EK L
Sbjct: 244 EMLGLVEQDLRAAYAIPVKQDRYAAVGKVKEKALA------------------------- 278
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
H P+ ++ + ++ V VFKE+ +K +R I++ G+R
Sbjct: 279 -------------------HFFPEGQEPK---YDKLRVAGVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR +R I + G+LPRAHGSALFTRGETQ++ V TLG + Q ID+L + +
Sbjct: 317 IDGRDVKTVRNIVAEAGVLPRAHGSALFTRGETQAMVVTTLGTGEDEQYIDSLAGTYK-E 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYTIRV S ITES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGAKRREIGHGKLAWRAIRPVLPPHHEFPYTIRVVSEITES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG L+L DAGVP+K AG+AMG++L+ + + +LSDI G ED
Sbjct: 436 NGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGERYA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L
Sbjct: 490 GDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALDRARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
+HAP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D S++
Sbjct: 550 GEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGESIKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P VG+IY +K + +G FV ++GL HIS+L++ + K DVV
Sbjct: 609 AIKWIKSIASDPEVGEIYEGTVVK-VMEFGAFVNFFGAKDGLVHISQLAAGRVQKTSDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRALLPEADAENPPVKLPTGDPTKDAA 858
K G V VKL+ +D+G+ RLS + + E + + GD ++AA
Sbjct: 668 KEGAKVKVKLLGFDDRGKTRLSMKVVDQETGEDLEAKQKAEGDAPREAA 716
>sp|Q89WB3|PNP_BRAJA Polyribonucleotide nucleotidyltransferase OS=Bradyrhizobium
japonicum (strain USDA 110) GN=pnp PE=3 SV=1
Length = 720
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 324/746 (43%), Positives = 446/746 (59%), Gaps = 59/746 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP + G+ +ETQ+++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIATVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD +A+ A+ A+ LS P I RVG V D++++NPT EM D+QLDL++AG+ DA
Sbjct: 126 PDIVALVASSAALTLSGAPFKGPIGAARVGFVNDEYVLNPTLDEMVDTQLDLVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E L+E++++ AV G + + N + L E K P+ + I L K
Sbjct: 186 VLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVID--NAALEK 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ + +EL I K R A+ ++EKV+
Sbjct: 244 EMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIA------------------------- 278
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
H P+ ++ + ++ + VFKE+ +K +R I++ G+R
Sbjct: 279 -------------------HYFPEGQEPK---YDKLRIAGVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR + +R I + G+LPRAHGSALFTRGETQ++ V TLG + Q ID L S +
Sbjct: 317 IDGRDSKTVRNIIAEVGVLPRAHGSALFTRGETQAMVVTTLGTGEDEQYIDAL-SGTYKE 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYTIRV S ITES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHHEFPYTIRVVSEITES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG LAL DAGVP+K AG+AMG++L+ F +LSDI G ED
Sbjct: 436 NGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L
Sbjct: 490 GDMDFKVAGTESGITSLQMDIKIEGITEEIMKVALGQAKDGRIHILGEMAKALTNARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
++AP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D +++
Sbjct: 550 GEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGEAMKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P VG IY +K + +G FV ++GL HIS+L+S + K DVV
Sbjct: 609 AIKWIKSIASEPEVGQIYDGTVVK-VMEFGAFVNFFGSKDGLVHISQLASARVQKTSDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRAL 835
K GD V VKL+ +D+G+ RLS + +
Sbjct: 668 KEGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|B3PXD7|PNP_RHIE6 Polyribonucleotide nucleotidyltransferase OS=Rhizobium etli (strain
CIAT 652) GN=pnp PE=3 SV=2
Length = 712
Score = 568 bits (1464), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/750 (42%), Positives = 447/750 (59%), Gaps = 67/750 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
+V+I + R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE
Sbjct: 6 TVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLTVNYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAG+ GG+FKREGR ++E LV RLIDRP+RP +G+ ++TQ++ V+ +D +
Sbjct: 66 KTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQHDLENN 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD L++ A A+ LS VP + G RVG + ++++NP EM++S LDL++AG+ DA
Sbjct: 126 PDILSMVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVAGTYDA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E L E++++ AV G + + + + L E+ K P+ PE Y
Sbjct: 186 VLMVESEAKELPEDVMLGAVMFGHKGFQPVLDAIIKLAEVAAKEPRDFQ------PEDYS 239
Query: 330 HVEE----IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIP 385
+E +A EL + +I K R A+ +++ KV
Sbjct: 240 ALESEMLGLAEAELREAYKITQKADRYAAVDAVKAKV----------------------- 276
Query: 386 DLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVE 445
H P+ ++ ++ +V +FK + +K +R I++
Sbjct: 277 ---------------------KAHFLPEEGEAK---YTAEEVGAIFKHLQAKIVRWNILD 312
Query: 446 GGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESD 505
R DGR + +RPI S GLLPR HGSALFTRGETQ++ V TLG + Q +D+L
Sbjct: 313 TKSRIDGRDLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGM 372
Query: 506 DEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVEST 565
+ +RF L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LPS FPYT+RV S
Sbjct: 373 YK-ERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSAEQFPYTLRVVSE 431
Query: 566 ITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGS 625
ITESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++L+ D F +LSDI G
Sbjct: 432 ITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFA------VLSDILGD 485
Query: 626 EDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPP 685
ED GDMDFKVAG DGIT+ QMDIK+ GIT +MK AL QA+ GR HIL EM K
Sbjct: 486 EDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALSQAQGGRTHILGEMAKAITES 545
Query: 686 SNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLS 745
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI +
Sbjct: 546 RGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSSGK 604
Query: 746 SLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKA 805
+E ++ I ++ P +G IY +K+ A +G FV R+GL HIS+L+S +AK
Sbjct: 605 EIEAARKWIHSIVAEPEIGQIYEGTVVKT-ADFGAFVNFFGARDGLVHISQLASERVAKT 663
Query: 806 EDVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
+DVVK GD V VKL+ +++G++RLS + +
Sbjct: 664 QDVVKEGDKVWVKLLGFDERGKVRLSMKVV 693
>sp|A9CKQ7|PNP_AGRT5 Polyribonucleotide nucleotidyltransferase OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=pnp PE=3 SV=1
Length = 713
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/750 (41%), Positives = 447/750 (59%), Gaps = 67/750 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I + R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE
Sbjct: 6 SVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLTVNYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAG+ GG+FKREGR + E LV RLIDRP+RP +G+ ++TQ++ V+ +D +
Sbjct: 66 KTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQHDLEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD L++ AA A+ LS +P + G RVG + ++++NP EM++S LDL++AG+ DA
Sbjct: 126 PDVLSMVAASAALTLSGIPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVAGTQDA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E L+EE+++ AV G + + + + L E+ K P+ + PE +
Sbjct: 186 VLMVESEAKELNEEIMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPREFE------PEDFS 239
Query: 330 HVEE----IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIP 385
+E +A EL +I K R A+ +++ KV
Sbjct: 240 ALENEMLGLAETELRTAYKITEKAARYAAVDAVKTKV----------------------- 276
Query: 386 DLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVE 445
H P+ ++ +S ++ VFK + +K +R +++
Sbjct: 277 ---------------------KAHFLPEEGEAK---YSPEEIGAVFKHLQAKIVRWNVLD 312
Query: 446 GGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESD 505
R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q +D+L
Sbjct: 313 TKSRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGM 372
Query: 506 DEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVEST 565
+ +RF L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYT+RV S
Sbjct: 373 YK-ERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAEQFPYTLRVVSE 431
Query: 566 ITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGS 625
ITESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++L+ + F +LSDI G
Sbjct: 432 ITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFA------VLSDILGD 485
Query: 626 EDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPP 685
ED GDMDFKVAG DGIT+ QMDIK+ GIT +MK AL+QA+ GR+HIL EM
Sbjct: 486 EDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKIALEQAQGGRKHILGEMANAITES 545
Query: 686 SNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLS 745
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI +
Sbjct: 546 RGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASASGK 604
Query: 746 SLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKA 805
+E ++ I ++ P VG IY +K+ A +G FV R+GL HIS+L+S +AK
Sbjct: 605 EIEAARKWIHSIVAEPEVGQIYEGTVVKT-ADFGAFVNFFGARDGLVHISQLASERVAKT 663
Query: 806 EDVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
DVVK GD V VKL+ +++G++RLS + +
Sbjct: 664 SDVVKEGDKVWVKLMGFDERGKVRLSMKVV 693
>sp|B0UEX5|PNP_METS4 Polyribonucleotide nucleotidyltransferase OS=Methylobacterium sp.
(strain 4-46) GN=pnp PE=3 SV=1
Length = 725
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/741 (42%), Positives = 443/741 (59%), Gaps = 59/741 (7%)
Query: 96 FGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAA 155
+G R++++ETG + RQA GAV + GET + +V P DF PL VNYQER AA
Sbjct: 11 WGGRKLVLETGKVARQADGAVVASYGETTVLATVVSMKEPKPGIDFLPLTVNYQERAYAA 70
Query: 156 GRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALA 215
GR GG+FKREGR + E LV RLIDRP+RP ++G+ ++TQ++ VLS+D + PD ++
Sbjct: 71 GRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVEGWRNDTQVVVTVLSHDLENDPDIVS 130
Query: 216 VTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIE 275
+ AA A+ LS VP I RVG +G ++ +NPT QEME+S LDL++AG+D A+LM+E
Sbjct: 131 MVAASAALTLSGVPFMGPIGAARVGYLGGQYKLNPTVQEMEESSLDLVVAGTDAAVLMVE 190
Query: 276 GYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKHVEEI 334
L E++++ AV G + + + L E K P+ L E+ K V EI
Sbjct: 191 SEAKELPEDVMLGAVMFGHKHFQPVIEAIIRLAEKAAKEPRDFQPTDLT--EVEKAVLEI 248
Query: 335 AGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDED 394
+L + + K R A+ +++ KV+ L G
Sbjct: 249 GEADLREAYRKTVKQERYAAVDAVKAKVMAALVPEG------------------------ 284
Query: 395 EEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGRF 454
G+ +P+ VK FKEV +K +R I++ G R DGR
Sbjct: 285 -----------GEAKFEPEK------------VKAAFKEVQAKVVRWNILDTGSRIDGRD 321
Query: 455 ADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYLQ 514
+RPI S G+LPRAHGSALFTRGETQ+L V TLG Q ID LE + + F L
Sbjct: 322 VRTVRPILSEVGVLPRAHGSALFTRGETQALVVATLGTGDDEQFIDALEGTYK-ETFLLH 380
Query: 515 YSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSSS 574
Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP ++FPYT+RV S ITESNGSSS
Sbjct: 381 YNFPPYSVGETGRMGSPGRREIGHGKLAWRAVHPLLPPAHEFPYTLRVVSEITESNGSSS 440
Query: 575 MASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMDF 634
MA+VCG LAL DAGVP++ +AG+AMG++L+ + + +LSDI G ED GDMDF
Sbjct: 441 MATVCGSSLALMDAGVPLRRPVAGIAMGLILEGERYA------VLSDILGDEDHLGDMDF 494
Query: 635 KVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHAP 694
KVAG E+G+T+ QMDIK+ GIT +M+ AL QAK+GR HIL EM K L +HAP
Sbjct: 495 KVAGTEEGVTSLQMDIKIAGITEEIMRVALDQAKEGRAHILGEMAKALTAARPELGEHAP 554
Query: 695 LIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAII 754
I M++ +KI +IG+GGK ++ I+E+TG + ID +D G VKI + D +++ + I
Sbjct: 555 RIETMQIPTDKIREVIGTGGKVIREIVEKTGAK-IDIQDTGVVKIASSDGKAIKAAYNWI 613
Query: 755 SNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDL 814
++ P G IY +K++ +G FV ++GL HISEL+ +AK DVVK GD
Sbjct: 614 RSIVAEPEAGMIYDGTVVKTM-EFGAFVNFFGAKDGLVHISELAPQRVAKVTDVVKEGDK 672
Query: 815 VDVKLIEVNDKGQLRLSRRAL 835
V VK + +++G++RLS + +
Sbjct: 673 VKVKFLGQDERGKIRLSMKVV 693
>sp|B5YHN2|PNP_THEYD Polyribonucleotide nucleotidyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=pnp PE=3 SV=1
Length = 710
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 323/753 (42%), Positives = 464/753 (61%), Gaps = 52/753 (6%)
Query: 90 VSVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQ 149
+ V++ ++++++TG +Q +G+V G+T + +V P E DF PL ++YQ
Sbjct: 1 MEVELEIKGKKLVLQTGIFAKQTNGSVLAKYGDTYVLCTVVAEKTPKEGLDFVPLTIDYQ 60
Query: 150 ERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLH 209
E+ +AG+ GGFFKREG+ D E+LV RLIDRP+RP GF +ETQ ++ VLSY +
Sbjct: 61 EKAYSAGKIPGGFFKREGKPTDREILVSRLIDRPVRPLFPDGFNYETQGIASVLSYGDEN 120
Query: 210 FPDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDD 269
D L++ A+ +S++P + +A VRVG+V ++FI+NP E E S L+L++AG+++
Sbjct: 121 IADILSIIGISSALTISDIPFNGPVAAVRVGMVEEEFILNPDNDEAEKSILNLVVAGTEE 180
Query: 270 AILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLP-PPELY 328
A+ M+EG SEE L++A++ +++I K L ++ GKPK + I L E+
Sbjct: 181 AVTMVEGGAAECSEETLVEALKFAHTHIKKIIALQKKLQQLSGKPKR-EIISLNGDEEIQ 239
Query: 329 KHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
K + I G ++ L + K+ R++AL L + L L+ + K L
Sbjct: 240 KAILNIIGGKIENALFLPKKVERQQALDELLNECLQNLNTEEFRQK------------LY 287
Query: 389 EDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGR 448
+ D+D +++ F +V KF+R IV+ G
Sbjct: 288 GNFDKD----------------------------ISLEITNAFDKVIKKFMRESIVKKGI 319
Query: 449 RSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEV 508
R+DGR +D IRPI+ G+LPR HGSALFTRGETQ+L TLG + Q++D+LE +
Sbjct: 320 RADGRKSDEIRPITCMIGILPRVHGSALFTRGETQALVATTLGTSEDEQKVDSLEGEI-F 378
Query: 509 KRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITE 568
K F L Y+F P SVGEV + AP RREIGHG LAERAL V+PS ++FPYTIRV S I E
Sbjct: 379 KTFMLHYNFLPFSVGEVKPLRAPGRREIGHGYLAERALSYVIPSKDEFPYTIRVVSDILE 438
Query: 569 SNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDA 628
SNGSSSMA+VCG L+L DAGVPIK +AGVAMG++ + GD T ++L+DI G ED
Sbjct: 439 SNGSSSMATVCGATLSLMDAGVPIKAPVAGVAMGLIKE-----GDKT-VVLTDILGMEDH 492
Query: 629 SGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNS 688
GDMDFKVAG E GITAFQMD+K+ GI+ + KKAL+QAK R IL +M + P
Sbjct: 493 YGDMDFKVAGTEKGITAFQMDVKISGISYEIFKKALKQAKQARLFILKKMAETISEPKKE 552
Query: 689 LSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTED-DGTVKITAKDLSSL 747
LS +AP I+ ++VKPEKI IIG+GGK +K IIEETGV+ ID ED +G VKI + + S+
Sbjct: 553 LSLYAPRIYKIQVKPEKIRDIIGTGGKVIKGIIEETGVK-IDIEDKEGIVKIASSNESAA 611
Query: 748 EKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAED 807
+K+ II +T +G IY ++ I +G FVEI PG EGL HIS+++ + K +
Sbjct: 612 QKAIEIIKGITQEAELGRIYMG-KVTRIVDFGAFVEIMPGVEGLLHISQIADKRIQKVSE 670
Query: 808 VVKVGDLVDVKLIEVNDKGQLRLSRRALLPEAD 840
V+K G+ + VK+IE+++ G++RLSR+ L E +
Sbjct: 671 VLKTGEQIPVKVIEIDELGRVRLSRKEALREIE 703
>sp|B1LZQ1|PNP_METRJ Polyribonucleotide nucleotidyltransferase OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=pnp PE=3 SV=1
Length = 739
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/743 (43%), Positives = 442/743 (59%), Gaps = 63/743 (8%)
Query: 96 FGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAA 155
+GDR++++ETG + RQA GAV T GET + +V A P DF PL VNYQER AA
Sbjct: 11 WGDRKLVLETGKVARQADGAVIATYGETSVLATVVAAKEPKPGIDFMPLTVNYQERAYAA 70
Query: 156 GRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALA 215
GR GG+FKREGR + E LV RLIDRP+RP I+G+ ++TQ++ VL++D + PD +A
Sbjct: 71 GRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFIEGWRNDTQVVVTVLTHDLENDPDIVA 130
Query: 216 VTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNP-TTQEMEDSQLDLLLAGSDDAILMI 274
+ AA A+ LS VP I G RVG + + +NP T+ E+S LDL++AG+ DA+LM+
Sbjct: 131 MVAASAALTLSGVPFMGPIGGARVGYINGGYRLNPLVTETKEESSLDLVVAGTQDAVLMV 190
Query: 275 EGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPP-PELYKHVE 332
E LSE++++ AV G + + + L E K P+ K P ++ K V
Sbjct: 191 ESEAKELSEDVMLGAVMFGHKHFQPVIEAIIRLAEKAAKEPR---DFKAPENADVEKAVL 247
Query: 333 EIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDED 392
E+ EL K R A+ +++ KV+ L G
Sbjct: 248 EVCEAELRAAYTKTVKQERYAAVDAVKAKVMAALCPEGAEK------------------- 288
Query: 393 EDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDG 452
F VK FKE SK +R I++ G R DG
Sbjct: 289 -----------------------------FPAEKVKAAFKEAQSKVVRWNILDSGARIDG 319
Query: 453 RFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFY 512
R +R I S G+LPRAHGSALFTRGETQ+L V TLG + Q ID LE + +RF
Sbjct: 320 RDVKTVRSILSEVGVLPRAHGSALFTRGETQALVVATLGTGEDEQFIDALEGTYK-ERFL 378
Query: 513 LQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGS 572
L Y+FPP SVGE GR+G+P RREIGHG LA RA+ PVLP ++FPYTIRV S ITESNGS
Sbjct: 379 LHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPVLPPAHEFPYTIRVVSEITESNGS 438
Query: 573 SSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDM 632
SSMASVCGG L+L DAGVP++ +AG+AMG++L+ + F +LSDI G ED GDM
Sbjct: 439 SSMASVCGGSLSLMDAGVPLRRPVAGIAMGLILEGERFA------VLSDILGDEDHLGDM 492
Query: 633 DFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKH 692
DFKVAG ++G+T+ QMDIK+ GIT +MK AL QAKDGR HILAEM K L ++
Sbjct: 493 DFKVAGTDEGVTSLQMDIKIAGITEEIMKIALAQAKDGRAHILAEMAKALTAARPELGEY 552
Query: 693 APLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKA 752
AP I M++ +KI +IG+GGK ++ I+E+TG + I+ ED G VKI + D +++ +
Sbjct: 553 APRIETMQIPTDKIRDVIGTGGKVIREIVEKTGAK-INIEDTGVVKIASADGKAIKAAYN 611
Query: 753 IISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVG 812
I ++ P VG IY +K + +G FV ++GL HISEL++ +AK +DVVK G
Sbjct: 612 WIRSIVAEPEVGVIYDGTIVKCM-EFGAFVNFFGAKDGLVHISELAAQRVAKVQDVVKEG 670
Query: 813 DLVDVKLIEVNDKGQLRLSRRAL 835
D V VK + +D+G++RLS + +
Sbjct: 671 DKVKVKFLGQDDRGKIRLSMKVV 693
>sp|B1ZGS7|PNP_METPB Polyribonucleotide nucleotidyltransferase OS=Methylobacterium
populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
GN=pnp PE=3 SV=1
Length = 745
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 323/744 (43%), Positives = 441/744 (59%), Gaps = 65/744 (8%)
Query: 96 FGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAA 155
+GDR++++ETG RQA GAV T GET + +V A P DF PL VNYQER AA
Sbjct: 11 WGDRKLVLETGKTARQADGAVVATYGETTVLATVVAAKEPKAGIDFMPLTVNYQERAYAA 70
Query: 156 GRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALA 215
GR GG+FKREGR + E LV RLIDRP+RP ++G+ ++TQ++ VLS+D + PD ++
Sbjct: 71 GRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVEGWRNDTQVVVTVLSHDLENDPDIVS 130
Query: 216 VTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIE 275
+ AA A+ LS VP I RVG + + +NP E+ +S LDL++AG+ DA+LM+E
Sbjct: 131 MVAASAALTLSGVPFMGPIGAARVGYLNGGYKLNPLVTEVAESTLDLVVAGTQDAVLMVE 190
Query: 276 GYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPE---LYKHV 331
LSE++++ AV G + + + L E K P+ PPE + K V
Sbjct: 191 SEAKELSEDVMLGAVMFGHKHFQPVIEAIIRLAEKAAKEPR-----DFSPPENADVEKAV 245
Query: 332 EEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDE 391
+I EL +I K R KA+ +++ KV+ L
Sbjct: 246 LDICESELRDAYKITVKQDRYKAVDAVKAKVVAALCPA---------------------- 283
Query: 392 DEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSD 451
EG+ P+ VK FKE SK +R I++ G R D
Sbjct: 284 -------------EGEQKFSPEK------------VKAAFKEAQSKVVRWNILDTGSRID 318
Query: 452 GRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRF 511
GR +RPI S G+LPRAHGS+LFTRGETQ+L V TLG + Q ID LE + +RF
Sbjct: 319 GRDVKTVRPIVSEVGVLPRAHGSSLFTRGETQALVVATLGTGEDEQFIDALEGTYK-ERF 377
Query: 512 YLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNG 571
L Y+FPP SVGE GR+G+P RREIGHG LA RA+ PVLP ++FPYTIRV S ITESNG
Sbjct: 378 LLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPVLPPAHEFPYTIRVVSEITESNG 437
Query: 572 SSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGD 631
SSSMASVCGG L+L DAGVP++ +AG+AMG++L+ + F +LSDI G ED GD
Sbjct: 438 SSSMASVCGGSLSLMDAGVPLRRPVAGIAMGLILEGERFA------VLSDILGDEDHLGD 491
Query: 632 MDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSK 691
MDFKVAG ++GIT+ QMDIK+ GIT +M+ AL QAKDGR HIL EM + L +
Sbjct: 492 MDFKVAGTDEGITSLQMDIKIAGITEEIMRVALAQAKDGRAHILGEMAQALTAARPELGE 551
Query: 692 HAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSK 751
+AP I M++ +KI +IG+GGK ++ I+E+TG + I+ ED G VKI + D +++ +
Sbjct: 552 YAPRIETMQIPTDKIRDVIGTGGKIIREIVEKTGAK-INIEDTGVVKIASSDGKAIKAAY 610
Query: 752 AIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKV 811
I ++ P G IY +K I +G FV ++GL HISEL+ +AK DVVK
Sbjct: 611 NWIRSIVAEPEAGTIYDGTIVK-IMEFGAFVNFFGAKDGLVHISELAPQRVAKVGDVVKE 669
Query: 812 GDLVDVKLIEVNDKGQLRLSRRAL 835
G V VK + +++G++RLS + +
Sbjct: 670 GQKVKVKFLGADERGKIRLSMKVV 693
>sp|P50849|PNP_BACSU Polyribonucleotide nucleotidyltransferase OS=Bacillus subtilis
(strain 168) GN=pnp PE=1 SV=3
Length = 705
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/743 (42%), Positives = 451/743 (60%), Gaps = 58/743 (7%)
Query: 94 IPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFS 153
I + R + VETG + +QA+GAV + G+T + ++ + P +P DFFPL VNY+ER
Sbjct: 10 IDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKEP-KPLDFFPLTVNYEERLY 68
Query: 154 AAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDA 213
A G+ GGF KREGR + VL RLIDRP+RP GF +E Q++S V+S D +
Sbjct: 69 AVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSVDQNCSSEM 128
Query: 214 LAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILM 273
A+ + +A+++S++P IAGV VG + D+FI+NPT ++E S ++L++AG+ DAI M
Sbjct: 129 AAMFGSSLALSVSDIPFEGPIAGVTVGRIDDQFIINPTVDQLEKSDINLVVAGTKDAINM 188
Query: 274 IEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEE 333
+E D + EE++++A+ G + ++ + + +V GK K + EL + V+
Sbjct: 189 VEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDEELNEKVKA 248
Query: 334 IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDE 393
+A E+L+K +Q+ K R A++ + +N V+K EDE+
Sbjct: 249 LAEEDLLKAIQVHEKHAREDAINEV---------KNAVVAK-------------FEDEEH 286
Query: 394 DEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGR 453
DE+ + K + S KLV EV RR I E R DGR
Sbjct: 287 DEDTI-----------------KQVKQILS----KLVKNEV-----RRLITEEKVRPDGR 320
Query: 454 FADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYL 513
D IRP+SS GLLPR HGS LFTRG+TQ+L+V TLG Q +D L +E KRF
Sbjct: 321 GVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGALGDVQILDGL-GVEESKRFMH 379
Query: 514 QYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSS 573
Y+FP SVGE G + P RREIGHG L ERALEPV+PS+ DFPYT+R+ S + ESNGS+
Sbjct: 380 HYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPSEKDFPYTVRLVSEVLESNGST 439
Query: 574 SMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMD 633
S AS+C LA+ DAGVPIK +AG+AMG+V + + +L+DI G EDA GDMD
Sbjct: 440 SQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHY------TVLTDIQGMEDALGDMD 493
Query: 634 FKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHA 693
FKVAG E G+TA QMDIK+ G++ ++++ALQQAK GR IL ML LS++A
Sbjct: 494 FKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLATLSESRKELSRYA 553
Query: 694 PLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAI 753
P I M + P+KI +IG GK++ IIEETGV+ ID E DGT+ I++ D S +K+K I
Sbjct: 554 PKILTMTINPDKIRDVIGPSGKQINKIIEETGVK-IDIEQDGTIFISSTDESGNQKAKKI 612
Query: 754 ISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGD 813
I +L VG +Y ++K I +G FVEI G++GL HISEL+ + K EDVVK+GD
Sbjct: 613 IEDLVREVEVGQLYLG-KVKRIEKFGAFVEIFSGKDGLVHISELALERVGKVEDVVKIGD 671
Query: 814 LVDVKLIEVNDKGQLRLSRRALL 836
+ VK+ E++ +G++ LSR+A+L
Sbjct: 672 EILVKVTEIDKQGRVNLSRKAVL 694
>sp|Q1QS60|PNP_NITHX Polyribonucleotide nucleotidyltransferase OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=pnp PE=3 SV=2
Length = 720
Score = 564 bits (1454), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/770 (42%), Positives = 459/770 (59%), Gaps = 59/770 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKTPREGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP G+ +ETQ++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPSEKETLVSRLIDRPVRPLFADGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ AA A+ LS P I RVG + D++++NPT EM D+QL+L++AG+ DA
Sbjct: 126 PDVLAMVAASAALTLSGAPFRGPIGAARVGFMNDEYVLNPTLDEMVDTQLELVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKH 330
+LM+E LSE++++ AV G R + A++E+
Sbjct: 186 VLMVESEAKELSEDIMLGAVMFGH---RHFQPVINAIIELA------------------- 223
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLED 390
E A +E +V Q + S+LE+++L ++ E P
Sbjct: 224 --EKAAKEPREVSQADD--------SALEKEMLGLIEG-------------ELRPAYAIA 260
Query: 391 EDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRS 450
+ + + V + H P+ ++ + ++ + VFK + +K +R I++ G+R
Sbjct: 261 DKQQRQNAVAAAKAKVIAHYFPEGQEPK---YDKLRIAAVFKHLEAKIVRWNILDTGKRI 317
Query: 451 DGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKR 510
DGR A +R I + G+LPRAHGSALFTRGETQ++ V TLG + Q ID L S +
Sbjct: 318 DGRDAKTVRNILAEVGVLPRAHGSALFTRGETQAMVVTTLGTGEDEQYIDAL-SGTYKET 376
Query: 511 FYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESN 570
F L Y+FPP SVGE GR+G+ RREIGHG LA RA+ PVLP ++FPYTIRV S ITESN
Sbjct: 377 FLLHYNFPPYSVGETGRLGSTKRREIGHGKLAWRAIHPVLPPHHEFPYTIRVVSEITESN 436
Query: 571 GSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASG 630
GSSSMASVCG L+L DAGVP+K AG+AMG++L+ + +LSDI G ED G
Sbjct: 437 GSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGSRYA------VLSDILGDEDHLG 490
Query: 631 DMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLS 690
DMDFKVAG E GI++ QMDIK+ GIT +MK AL QA++GR HIL EM K L
Sbjct: 491 DMDFKVAGTEVGISSLQMDIKIAGITEEIMKVALAQAREGRIHILGEMAKALTNARAELG 550
Query: 691 KHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKS 750
++AP I K+ +KI +IG+GGK ++ I+E+TG + I+ EDDGTVK+ + D +++ +
Sbjct: 551 EYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-INIEDDGTVKVASNDGEAMKAA 609
Query: 751 KAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVK 810
I ++ P VG IY +K + +G FV ++GL HIS+L++N + K+ D+VK
Sbjct: 610 IKWIKSIASDPEVGQIYEGTVVK-VMEFGAFVNFFGAKDGLVHISQLAANRVQKSSDIVK 668
Query: 811 VGDLVDVKLIEVNDKGQLRLSRRALLPEA--DAENPPVKLPTGDPTKDAA 858
GD V VKL+ +D+G+ RLS +A+ + D E K D ++AA
Sbjct: 669 EGDKVKVKLLGFDDRGKTRLSMKAVDQQTGEDLEAAGHKAEKADAPREAA 718
>sp|A6WWW1|PNP_OCHA4 Polyribonucleotide nucleotidyltransferase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=pnp PE=3
SV=1
Length = 713
Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust.
Identities = 323/752 (42%), Positives = 448/752 (59%), Gaps = 58/752 (7%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETVVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP ++G+ ++TQ++ V+ +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVEGYKNDTQVVLTVVQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I G RVG + ++++NP EM +S+LDL++AG+ DA+
Sbjct: 127 DVLSMVAASAALTISGVPFMGPIGGARVGYINGEYVLNPNIDEMPESKLDLVVAGTADAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E LSEE+++ AV GQ + + + + L E+ K P+ PE
Sbjct: 187 LMVESEAQELSEEVMLGAVVFGQKGFQPVIDAIIKLAEVAAKEPRDFQ------PE---- 236
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLED 390
LS LE K+L ++ + + T
Sbjct: 237 -----------------------DLSDLEAKMLAVVENDLRDAYKIT------------- 260
Query: 391 EDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRS 450
E + V VD + H P+ + FS VFK + +K +R I++ G R
Sbjct: 261 EKQARYVAVDAAKAKAKAHFFPEGVEEPE--FSAEKFATVFKHLQAKIVRWNILDTGSRI 318
Query: 451 DGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKR 510
DGR +R I S GLLPR HGSALFTRGETQ++ V TLG + Q ID L + +
Sbjct: 319 DGRDLKTVRAIVSEVGLLPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTGTYK-ES 377
Query: 511 FYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESN 570
F L Y+FPP SVGE GR+G+P RRE+GHG LA RA+ P+LP+ + FPYTIR S ITESN
Sbjct: 378 FMLHYNFPPYSVGETGRMGSPGRREVGHGKLAWRAIHPMLPAADQFPYTIRSVSEITESN 437
Query: 571 GSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASG 630
GSSSMA+VCG LAL DAGVP+ +AG+AMG++ + + F +LSDI G ED G
Sbjct: 438 GSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFA------VLSDILGDEDHLG 491
Query: 631 DMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLS 690
DMDFKVAG ++GITA QMDIK+ GIT +MK AL+QAK GR HIL EM K L
Sbjct: 492 DMDFKVAGTDNGITALQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKALSTSREELG 551
Query: 691 KHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKS 750
+ AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + + +E +
Sbjct: 552 EFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNGKEIEAA 610
Query: 751 KAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVK 810
K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+S+ +AK DVVK
Sbjct: 611 KKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLASDRVAKTTDVVK 669
Query: 811 VGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
G V VKL+ +++G++RLS + + E E
Sbjct: 670 EGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|B8CW78|PNP_HALOH Polyribonucleotide nucleotidyltransferase OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=pnp PE=3 SV=1
Length = 705
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/739 (43%), Positives = 446/739 (60%), Gaps = 50/739 (6%)
Query: 104 ETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFSAAGRTSGGFF 163
ETG +QA+G+V G+T + + +++ P E D+FPL VNY+ER A G+ G
Sbjct: 17 ETGKYAKQANGSVVARYGDTTVLVTATMSE-PREGIDYFPLMVNYEERVYAIGKIPGSIT 75
Query: 164 KREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDALAVTAAGIAV 223
+REGR +D L RLIDRPLRP +GF H+ QI++ VLS D PD LA+ A +A+
Sbjct: 76 RREGRPRDVATLAARLIDRPLRPLFPEGFRHDVQIIATVLSVDNDCEPDILALNGASVAL 135
Query: 224 ALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILMIEGYCDFLSE 283
LS++P I GV+VGLV + ++NP +E E S+LDL +AG+ DA+LM+E + +SE
Sbjct: 136 TLSDIPFDGPIGGVKVGLVDGELVINPDEEEREKSKLDLTVAGTRDAVLMVEAGANEVSE 195
Query: 284 EMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEEIAGEELVKVL 343
++++ A+++ ++ + + + E GK K T PEL + + + ++ L
Sbjct: 196 DVMLDAIELAHQEIKRLVLLQEEIGEEAGKKKFEFTKDEITPELDEEIRKYISSDMENAL 255
Query: 344 QIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDEDEEVVVDGEV 403
+I K+ R + ++E L D+ E+ D E
Sbjct: 256 RIPEKLERNAKVDEIKENTLQYFE------------------DMFENNGLDNE------- 290
Query: 404 DEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGRFADGIRPISS 463
K+ + E ++ V KE +R+ I+E G R DGR D IRPI
Sbjct: 291 -----------EKNKQLKMVERTIEKVMKEK----VRKMIIEEGIRPDGRKPDEIRPIWC 335
Query: 464 RCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYLQYSFPPSSVG 523
G LPR HGS +FTRG+TQ+L+V+TLG Q + L ++E KR+ Y+FPP SVG
Sbjct: 336 EVGTLPRVHGSGVFTRGQTQALSVVTLGATSDEQILFGL-GEEETKRYMHHYNFPPYSVG 394
Query: 524 EVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSSSMASVCGGCL 583
E + +P RREIGHG L ERAL+PV+P +FPYTIRV S + ESNGS+S AS+CG L
Sbjct: 395 ETSPLRSPGRREIGHGALGERALQPVIPDQEEFPYTIRVVSEVLESNGSTSQASICGSTL 454
Query: 584 ALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMDFKVAGNEDGI 643
AL DAGVPIK +AG+AMG++ + D +ILSDI G ED GDMDFKVAG +GI
Sbjct: 455 ALMDAGVPIKEPVAGIAMGLLKE------DEKVVILSDIQGLEDFYGDMDFKVAGTRNGI 508
Query: 644 TAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHAPLIHIMKVKP 703
TA QMDIK+ GI+ ++KKAL++A++GR +IL +ML+ P LS +APL+ MKV P
Sbjct: 509 TALQMDIKIHGISKEILKKALKRAREGRLYILDKMLQVIDKPRPELSPYAPLMITMKVSP 568
Query: 704 EKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAIISNLTMVPTV 763
+KI IIG GGK + II+ETGVE ID +DDG+V I A+D S ++K II+ LT V
Sbjct: 569 DKIRHIIGPGGKIINKIIDETGVE-IDIDDDGSVYILAQDQESGNRAKEIINKLTKEVEV 627
Query: 764 GDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGDLVDVKLIEVN 823
GDIY +K I +G FVEI PGREGL HISEL+ + + K ED+VK+GD + VK+IE++
Sbjct: 628 GDIYEG-RVKKITNFGAFVEILPGREGLVHISELADHHVKKVEDIVKIGDRIPVKVIEID 686
Query: 824 DKGQLRLSRRALLPEADAE 842
+ G++ LSR+ L E E
Sbjct: 687 ELGRINLSRKRALKEQKKE 705
>sp|Q1MN44|PNP_RHIL3 Polyribonucleotide nucleotidyltransferase OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=pnp PE=3 SV=1
Length = 712
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/750 (41%), Positives = 445/750 (59%), Gaps = 67/750 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
+V+I + R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE
Sbjct: 6 TVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKAGQDFFPLTVNYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAG+ GG+FKREGR + E LV RLIDRP+RP +G+ ++TQ++ V+ +D +
Sbjct: 66 KTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQHDLEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD L++ A A+ LS VP + G RVG + ++++NP EM++S LDL++AG+ DA
Sbjct: 126 PDVLSMVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVAGTYDA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E L+E++++ AV G + + + + L E+ K P+ P Y
Sbjct: 186 VLMVESEAKELNEDVMLGAVMFGHKGFQPVLDAIIKLAEVAAKEPRDFQ------PADYS 239
Query: 330 HVEE----IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIP 385
+E +A EL +I K R A+ +++ KV
Sbjct: 240 ALESEMLGLAEGELRNAYKITQKADRYAAVDAVKAKV----------------------- 276
Query: 386 DLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVE 445
H P+ ++ ++ +V +FK + +K +R I++
Sbjct: 277 ---------------------KAHFLPEEGEAK---YTAEEVGAIFKHLQAKIVRWNILD 312
Query: 446 GGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESD 505
R DGR + +RPI S GLLPR HGSALFTRGETQ++ V TLG + Q +D+L
Sbjct: 313 TKSRIDGRNLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGM 372
Query: 506 DEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVEST 565
+ +RF L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYT+RV S
Sbjct: 373 YK-ERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTPEQFPYTLRVVSE 431
Query: 566 ITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGS 625
ITESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++L+ D F +LSDI G
Sbjct: 432 ITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFA------VLSDILGD 485
Query: 626 EDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPP 685
ED GDMDFKVAG DGIT+ QMDIK+ GIT +MK AL QA+ GR HIL EM K
Sbjct: 486 EDHLGDMDFKVAGTADGITSLQMDIKITGITEEIMKVALGQAQGGRVHILGEMSKAITES 545
Query: 686 SNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLS 745
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI +
Sbjct: 546 RGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSSGK 604
Query: 746 SLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKA 805
+E ++ I ++ P +G +Y +K+ A +G FV R+GL HIS+L+S +AK
Sbjct: 605 EIEAARKWIHSIVAEPEIGQVYEGTVVKT-ADFGAFVNFFGARDGLVHISQLASERVAKT 663
Query: 806 EDVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
+DVVK GD V VKL+ +++G++RLS + +
Sbjct: 664 QDVVKEGDKVWVKLLGFDERGKVRLSMKVV 693
>sp|Q98BI3|PNP_RHILO Polyribonucleotide nucleotidyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=pnp PE=3 SV=1
Length = 715
Score = 561 bits (1446), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/745 (42%), Positives = 447/745 (60%), Gaps = 58/745 (7%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R +++ETG + RQA GAV T GET + +V P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLILETGKIARQADGAVLATYGETKVLATVVSMKEPKPGLDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR + E LV RLIDRP+RP G+ ++TQI+ V+ +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFADGYKNDTQIVVTVVQHDLENDP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ A A+ LS VP + G RVG + ++++NP EM++S+LDL++AG+ DA+
Sbjct: 127 DILSIVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHIDEMQESKLDLVVAGTADAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E L EE+++ AV G + + + + L E+ K P+ D L
Sbjct: 187 LMVESEAKELGEELMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPR--DFTAPDYSALEGE 244
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLED 390
+ +I G+EL +I +K R A+ +++ KV +
Sbjct: 245 MLKIVGDELSNAYKITDKQQRYAAVDAVKAKVKAAFAP---------------------- 282
Query: 391 EDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRS 450
+GE +PK ++ + VFKE+ +K +R I++ G R
Sbjct: 283 --------AEGE--------EPK--------YTSEQIGSVFKELQAKVVRWNILDTGSRI 318
Query: 451 DGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKR 510
DGR +R I S G+LPR HGSALFTRGETQ+L V TLG + Q +D+L + ++
Sbjct: 319 DGRDLKTVRKIVSEVGVLPRTHGSALFTRGETQALVVATLGTGEDEQYVDSLTGMYK-EK 377
Query: 511 FYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESN 570
F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LPS + FPYT+RV S ITESN
Sbjct: 378 FLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSADQFPYTLRVVSEITESN 437
Query: 571 GSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASG 630
GSSSMA+VCG LAL DAGVP+ +AG+AMG++ + + F +LSDI G ED G
Sbjct: 438 GSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEGERFA------VLSDILGDEDHLG 491
Query: 631 DMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLS 690
DMDFKVAG +GIT+ QMDIK+ GIT +MK AL QAKDGR+HIL EM L
Sbjct: 492 DMDFKVAGTANGITSLQMDIKIEGITEEIMKIALDQAKDGRQHILGEMAHALTGARPELG 551
Query: 691 KHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKS 750
+ AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + + +E +
Sbjct: 552 EFAPRIEVMHIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNAKEIEAA 610
Query: 751 KAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVK 810
K I + P VG+IY +K+ A +G FV R+GL HIS+L++ +AK DVVK
Sbjct: 611 KKWIHTIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLANERVAKTSDVVK 669
Query: 811 VGDLVDVKLIEVNDKGQLRLSRRAL 835
GD V VKL+ +++G++RLS + +
Sbjct: 670 EGDKVWVKLMGFDERGKVRLSMKVV 694
>sp|A4YJF3|PNP_BRASO Polyribonucleotide nucleotidyltransferase OS=Bradyrhizobium sp.
(strain ORS278) GN=pnp PE=3 SV=1
Length = 719
Score = 561 bits (1446), Expect = e-159, Method: Compositional matrix adjust.
Identities = 323/746 (43%), Positives = 443/746 (59%), Gaps = 59/746 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P + DF PL V+YQE
Sbjct: 6 SVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPRDGVDFLPLTVDYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP + + +ETQ++ VLS+D +
Sbjct: 66 KAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDSWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD +A+ AA A+ LS VP I RVG D++I+NPT EM D+QLDL++AG+ DA
Sbjct: 126 PDIVALVAASAALTLSGVPFKGPIGAARVGFANDEYILNPTLDEMADTQLDLVVAGTSDA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E L+E++++ AV G + + N + L E K P+ D + + K
Sbjct: 186 VLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKDPR--DVAIIDNSAIEK 243
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
+ IA ++L K I K R A+ +++EKV+ G
Sbjct: 244 EMLGIAEQDLRKAYAIAIKQERYAAVGAVKEKVMAYFFPEGQ------------------ 285
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
+PK + ++ V VFKE+ +K +R I++ G+R
Sbjct: 286 ---------------------EPK--------YDKLRVAAVFKELEAKIVRWNILDTGKR 316
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR A +R I G+LPRAHGSALFTRGETQ+L V TLG + Q ID L S +
Sbjct: 317 IDGRDAKTVRNIVCEVGVLPRAHGSALFTRGETQALVVTTLGTGEDEQYIDAL-SGTYKE 375
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYT RV S +TES
Sbjct: 376 TFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHHEFPYTTRVVSEVTES 435
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMA+VCG LAL DAGVP+K AG+AMG++L+ F +LSDI G ED
Sbjct: 436 NGSSSMATVCGSSLALMDAGVPLKRPTAGIAMGLILEGSRFA------VLSDILGDEDHL 489
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG E GIT+ QMDIK+ GIT +M+ AL QA++GR HIL EM K L
Sbjct: 490 GDMDFKVAGTESGITSLQMDIKIEGITEEIMRVALGQAREGRIHILGEMSKALTAARAEL 549
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEK 749
++AP I K+ +KI +IG+GGK ++ I+E+TG + ++ EDDGTVK+ + D +++
Sbjct: 550 GEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAK-VNIEDDGTVKVASSDGEAMKA 608
Query: 750 SKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVV 809
+ I ++ P VG IY +K + +G FV R+GL HIS+L+ + K DVV
Sbjct: 609 AIKWIKSIASDPEVGQIYDGTVVK-VMEFGAFVNFFGTRDGLVHISQLADKRVQKTTDVV 667
Query: 810 KVGDLVDVKLIEVNDKGQLRLSRRAL 835
K GD V VKL+ +D+G+ RLS + +
Sbjct: 668 KEGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|Q6G5F8|PNP_BARHE Polyribonucleotide nucleotidyltransferase OS=Bartonella henselae
(strain ATCC 49882 / Houston 1) GN=pnp PE=3 SV=1
Length = 733
Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/743 (42%), Positives = 447/743 (60%), Gaps = 58/743 (7%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
++I + R + +ETG + RQA GAV T GETI+ +V A P DFFPL VNYQE+
Sbjct: 7 IEIEWAGRPLTLETGKIARQADGAVIATYGETIVLATVVSAKSPKPDQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
A GR GG+ KRE R ++E L+ RLIDRP+RP G+ ++TQ++ V+ +D + P
Sbjct: 67 SYAVGRIPGGYLKRESRPSENETLISRLIDRPIRPLFADGYKNDTQVIVSVIQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D LA+ A+ A+ LS VP IAG RVG ++I+NP EM +S+LDL++AG+++A+
Sbjct: 127 DILAMIASSAALTLSGVPFMGPIAGARVGYCNGQYILNPHIDEMSESKLDLVVAGTENAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E L E++++ AV G ++ I + + L E+ K P+ D + +L
Sbjct: 187 LMVESEAQELPEDIMLGAVMFGHKGLQPILDAIIKLAEVAAKDPR--DFVPEDLSDLETA 244
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLED 390
+ E+A +++ K I +K R AL +L+ E I + +
Sbjct: 245 MLEMAEKDIRKAYTITDKQERYAALDALK---------------------TEIINKFMPE 283
Query: 391 EDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRS 450
+ED + VD + VFK++ +K +R I++ +R
Sbjct: 284 TEEDCKFSVD-------------------------QIATVFKQLQAKIVRSNILDTKKRI 318
Query: 451 DGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKR 510
DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID+L + +
Sbjct: 319 DGRDLSTVRPIQSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQYIDSLTGMYK-ET 377
Query: 511 FYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESN 570
F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LPS FPYTIR S ITESN
Sbjct: 378 FLLHYNFPPFSVGETGRLGSPGRREIGHGKLAWRAIHPMLPSKESFPYTIRAVSEITESN 437
Query: 571 GSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASG 630
GSSSMA+VCG LAL DAGVP+ +AG+AMG++ + + F +LSDI G ED G
Sbjct: 438 GSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFA------VLSDILGDEDHLG 491
Query: 631 DMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLS 690
DMDFKVAG +GITA QMDIK+ GIT +MK AL+QAK GR HIL EM K LS
Sbjct: 492 DMDFKVAGTANGITALQMDIKIDGITEEIMKIALEQAKGGRIHILNEMAKALTSARAELS 551
Query: 691 KHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKS 750
+ +P I +M + +KI +IG+GGK ++ I+E+TG + I+ EDDGT++I + D ++E +
Sbjct: 552 EFSPRIEVMNIAVDKIRDVIGTGGKVIREIVEQTGAK-INIEDDGTIRIASADAKTIEAA 610
Query: 751 KAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVK 810
K I ++ P VG IY+ +K+ A +G FV R+GL HIS+L++ + K DVVK
Sbjct: 611 KRWIHSIVDEPEVGVIYQGTVVKT-AEFGAFVNFFGSRDGLVHISQLTTERVTKTTDVVK 669
Query: 811 VGDLVDVKLIEVNDKGQLRLSRR 833
GD V VKL+ +++G++RLS +
Sbjct: 670 EGDKVWVKLMGFDERGKVRLSMK 692
>sp|Q21C27|PNP_RHOPB Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas
palustris (strain BisB18) GN=pnp PE=3 SV=1
Length = 715
Score = 560 bits (1442), Expect = e-158, Method: Compositional matrix adjust.
Identities = 319/749 (42%), Positives = 445/749 (59%), Gaps = 65/749 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A E DF PL V+Y E
Sbjct: 6 SVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSAKEGVDFLPLTVDYIE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP + G+ +ETQ++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ A+ A+ LS P I RVG + D++++NPT EM D+QLDL++AG+ DA
Sbjct: 126 PDILALVASSAALTLSGAPFKGPIGAARVGFINDEYVLNPTLDEMVDTQLDLVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK----PKMLDTIKLPPPE 326
+LM+E L+E++++ AV G R V+A++E+ K P+ + +
Sbjct: 186 VLMVESEAKELNEDIMLGAVMFGH---RHFQPVVQAIIELAEKAAKEPREVAVVD--ESV 240
Query: 327 LYKHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPD 386
L K + + EL I K R A+ +EKV+
Sbjct: 241 LEKEILGLIEPELRAAYAIPVKQDRYAAVGKAKEKVMA---------------------- 278
Query: 387 LLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEG 446
H P+ ++ + ++ + VFKE+ +K +R I++
Sbjct: 279 ----------------------HYFPEGQEPQ---YDKLRIAGVFKELEAKIVRWNILDT 313
Query: 447 GRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDD 506
G+R DGR + +R I ++ G+LPRAHGSALFTRGETQ+L V TLG + Q ID+L S
Sbjct: 314 GKRIDGRDSKTVRNIVAQVGVLPRAHGSALFTRGETQALVVTTLGTGEDEQYIDSL-SGT 372
Query: 507 EVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTI 566
+ F L Y+FPP SVGE GR+G RREIGHG LA RA+ PVLP ++FPYT+RV S I
Sbjct: 373 YKETFLLHYNFPPYSVGETGRMGGTKRREIGHGKLAWRAIHPVLPPHHEFPYTLRVVSEI 432
Query: 567 TESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSE 626
TESNGSSSMASVCG LAL DAGVP+K AG+AMG++L+ + F +LSDI G E
Sbjct: 433 TESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFA------VLSDILGDE 486
Query: 627 DASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPS 686
D GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QAKDGR HIL EM K
Sbjct: 487 DHLGDMDFKVAGTEQGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSKALTNAR 546
Query: 687 NSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSS 746
L ++AP I K+ +KI +IG+GGK ++ I+E+TG + ++ +DDGTVK+ + D S
Sbjct: 547 AELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAK-VNIDDDGTVKVASSDGES 605
Query: 747 LEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAE 806
++ + I ++ P + IY +K + +G FV ++GL HIS+L++ + K
Sbjct: 606 IKAAIKWIKSIASDPELNAIYDGTVVK-VMEFGAFVNFFGAKDGLVHISQLAAGRVQKTS 664
Query: 807 DVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
DVVK GD V VKL+ +D+G+ RLS + +
Sbjct: 665 DVVKEGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|C3MC71|PNP_RHISN Polyribonucleotide nucleotidyltransferase OS=Rhizobium sp. (strain
NGR234) GN=pnp PE=3 SV=1
Length = 717
Score = 558 bits (1438), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/749 (42%), Positives = 444/749 (59%), Gaps = 66/749 (8%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I + R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP G+ ++TQ++ V+ +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPDGYKNDTQVIVTVMQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D +++ AA A+ LS +P I G RVG + ++++NP EM++S LDL++AG+ +A+
Sbjct: 127 DVVSMVAASAALTLSGIPFMGPIGGARVGYINGEYVLNPHLDEMDESSLDLVVAGTQEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E L E++++ AV GQ + + + + L E+ K P+ D PE +
Sbjct: 187 LMVESEAKELPEDVMLGAVVFGQQGFQPVIDAIIKLAEVAAKEPREFD------PEDHSA 240
Query: 331 VEE----IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPD 386
+E IA +EL +I K R A+ +++ KV +P+
Sbjct: 241 LENAMLAIAEDELRNAYKITEKAARYAAVDAVKAKVKE-----------------HFLPE 283
Query: 387 LLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEG 446
+E+ E ++ VFK + +K +R I++
Sbjct: 284 GIENPAHTAE-----------------------------EIGSVFKHLQAKIVRWNILDT 314
Query: 447 GRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDD 506
R DGR + +RPI S GLLPR HGSALFTRGETQ++ V TLG + Q +D+L
Sbjct: 315 KSRIDGRDLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGMY 374
Query: 507 EVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTI 566
+ +RF L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP FPYT+RV S I
Sbjct: 375 K-ERFMLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIRPMLPEAEQFPYTLRVVSEI 433
Query: 567 TESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSE 626
TESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++ + + F +LSDI G E
Sbjct: 434 TESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDERFA------VLSDILGDE 487
Query: 627 DASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPS 686
D GDMDFKVAG E GIT+ QMDIK+ GIT +M AL QAK GR HIL EM K
Sbjct: 488 DHLGDMDFKVAGTEAGITSLQMDIKIEGITEEIMGIALNQAKGGRLHILGEMAKAISESR 547
Query: 687 NSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSS 746
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI +
Sbjct: 548 GQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSSGKE 606
Query: 747 LEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAE 806
+E ++ I ++ P VG IY +K+ A +G FV R+GL HIS+L+S +AK
Sbjct: 607 IEAARKWIHSIVAEPEVGQIYEGTVVKT-ADFGAFVNFFGARDGLVHISQLASERVAKTT 665
Query: 807 DVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
DVVK GD V VKL+ +++G++RLS + +
Sbjct: 666 DVVKEGDKVWVKLMGFDERGKVRLSMKVV 694
>sp|B9JYL0|PNP_AGRVS Polyribonucleotide nucleotidyltransferase OS=Agrobacterium vitis
(strain S4 / ATCC BAA-846) GN=pnp PE=3 SV=1
Length = 714
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/750 (41%), Positives = 449/750 (59%), Gaps = 67/750 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I + R + +ETG + RQA GAV + GET++ +V A P DFFPL VNYQE
Sbjct: 6 SVEIEWAGRPLKLETGKIARQADGAVLASYGETVVLATVVSAKSPKPGQDFFPLTVNYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAG+ GG+FKREGR + E LV RLIDRP+RP +G+ ++TQ++ V+ +D +
Sbjct: 66 KTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQHDLEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD L++ AA A+ LS VP + G RVG + ++++NP EM++S LDL++AG+ DA
Sbjct: 126 PDVLSMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVAGTQDA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E L+E++++ AV G + + + + L E+ K P+ + PE +
Sbjct: 186 VLMVESEAKELNEDVMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPREFE------PEDHS 239
Query: 330 HVE----EIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIP 385
+E IA EL +I K R A+ +++ KV
Sbjct: 240 ALEAEMLSIAEAELRDAYKITQKADRYTAVDAVKAKV----------------------- 276
Query: 386 DLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVE 445
H P+ + P +EV + VFK + +K +R I++
Sbjct: 277 ---------------------KAHFFPEG--AEPKYTNEV-IGAVFKHLQAKIVRWNILD 312
Query: 446 GGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESD 505
R DGR + +R I S G+LPR HGSALFTRGETQ++ V TLG + Q +D+L
Sbjct: 313 TKSRIDGRDLETVRAIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGM 372
Query: 506 DEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVEST 565
+ +RF L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LPS FPYT+RV S
Sbjct: 373 YK-ERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSPEQFPYTLRVVSE 431
Query: 566 ITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGS 625
ITESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++L+ + F +LSDI G
Sbjct: 432 ITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFA------VLSDILGD 485
Query: 626 EDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPP 685
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL QA++GR+HIL EM
Sbjct: 486 EDHLGDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALAQAQNGRKHILGEMANAITEG 545
Query: 686 SNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLS 745
+ L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGT+KI +
Sbjct: 546 RSQLGEFAPRIEVMTIPVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTIKIASASGK 604
Query: 746 SLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKA 805
+E ++ I ++ P +G +Y +K+ A +G FV R+GL HIS+L+ + +AK
Sbjct: 605 EIEAARKWIHSIVAEPEIGVVYEGTVVKT-ADFGAFVNFFGSRDGLVHISQLAVDRVAKT 663
Query: 806 EDVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
+DVVK GD V VKL+ +++G++RLS + +
Sbjct: 664 QDVVKEGDKVWVKLMGFDERGKVRLSMKVV 693
>sp|Q07V82|PNP_RHOP5 Polyribonucleotide nucleotidyltransferase OS=Rhodopseudomonas
palustris (strain BisA53) GN=pnp PE=3 SV=1
Length = 721
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/745 (42%), Positives = 448/745 (60%), Gaps = 57/745 (7%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
SV+I +G R + +ETG + RQA GAV T GET++ +V A P E DF PL V+Y E
Sbjct: 6 SVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKTPREGVDFLPLTVDYIE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAGR GG+FKREGR + E LV RLIDRP+RP + G+ +ETQ++ VLS+D +
Sbjct: 66 KTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSHDMEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD LA+ A A+ LS P I RVG + D++++NP EM ++QLDL++AG+ DA
Sbjct: 126 PDILALVATSAALTLSGAPFKGPIGAARVGFINDEYVLNPVLDEMIETQLDLVVAGTADA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKH 330
+LM+E L+E++++ AV G R V+A++E+ K P K
Sbjct: 186 VLMVESEAKELNEDIMLGAVMFGH---RHFQPVVQAIIELAEKAA-------KEPRDVKV 235
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLED 390
++E S LE+++L ++ ++ + IP
Sbjct: 236 IDE----------------------SVLEKEILGLIEQD--------LRAAYAIP----- 260
Query: 391 EDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRS 450
+D V D+ H P+ ++ + ++ + VFKE+ +K +R I++ G+R
Sbjct: 261 VKQDRYAAVGKAKDKVMAHYFPEGQEPQ---YDKLRIAGVFKELEAKIVRWNILDTGKRI 317
Query: 451 DGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKR 510
DGR + +R I + G+LPRAHGSALFTRGETQ+L V TLG + Q ID+L S ++
Sbjct: 318 DGRDSTTVRQIIAEVGVLPRAHGSALFTRGETQALVVTTLGTGEDEQYIDSL-SGTYKEQ 376
Query: 511 FYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESN 570
F L Y+FPP SVGE GR+G RREIGHG LA RAL PVLP ++FPYT+RV S ITESN
Sbjct: 377 FLLHYNFPPFSVGETGRMGGTKRREIGHGKLAWRALHPVLPPHHEFPYTLRVVSEITESN 436
Query: 571 GSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASG 630
GSSSMASVCG LAL DAGVP+K AG+AMG++L+ + F +LSDI G ED G
Sbjct: 437 GSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFA------VLSDILGDEDHLG 490
Query: 631 DMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLS 690
DMDFKVAG + GIT+ QMDIK+ GIT +MK AL QAK+GR HIL EM K L
Sbjct: 491 DMDFKVAGTDHGITSLQMDIKIAGITEEIMKVALGQAKEGRIHILGEMSKALTNARAELG 550
Query: 691 KHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKS 750
++AP I K+ +KI +IG+GGK ++ I+E+TG + ++ +DDGTVK+ + D S++ +
Sbjct: 551 EYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAK-VNIDDDGTVKVASSDGESIKAA 609
Query: 751 KAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVK 810
I ++ P + IY +K + +G FV ++GL HIS+L++ + K DVVK
Sbjct: 610 IKWIKSIASDPELNAIYDGTVVK-VMEFGAFVNFFGAKDGLVHISQLAAGRVQKTSDVVK 668
Query: 811 VGDLVDVKLIEVNDKGQLRLSRRAL 835
GD V VKL+ +D+G+ RLS + +
Sbjct: 669 EGDKVKVKLLGFDDRGKTRLSMKVV 693
>sp|Q8YEB7|PNP_BRUME Polyribonucleotide nucleotidyltransferase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=pnp
PE=3 SV=1
Length = 714
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/756 (42%), Positives = 448/756 (59%), Gaps = 66/756 (8%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E L E++++ AV G + + + + + L E+ K P+ PE
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFQ------PE---- 236
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE- 389
LS LE KVL ++ EN DL E
Sbjct: 237 -----------------------DLSELEAKVLAVV-EN----------------DLREA 256
Query: 390 ---DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEG 446
E + VD + + H P+ + T M S +FK + +K +R I++
Sbjct: 257 YKITEKQARYAAVDAAKAKAEEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNILDT 314
Query: 447 GRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDD 506
G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 315 GNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTGTY 374
Query: 507 EVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTI 566
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S I
Sbjct: 375 K-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVSEI 433
Query: 567 TESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSE 626
TESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G E
Sbjct: 434 TESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILGDE 487
Query: 627 DASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPS 686
D GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 488 DHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISSSR 547
Query: 687 NSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSS 746
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 548 AELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNGKE 606
Query: 747 LEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAE 806
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 607 IEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAKTT 665
Query: 807 DVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 666 DVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|C0RG51|PNP_BRUMB Polyribonucleotide nucleotidyltransferase OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=pnp PE=3 SV=1
Length = 714
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/756 (42%), Positives = 448/756 (59%), Gaps = 66/756 (8%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E L E++++ AV G + + + + + L E+ K P+ PE
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFQ------PE---- 236
Query: 331 VEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE- 389
LS LE KVL ++ EN DL E
Sbjct: 237 -----------------------DLSELEAKVLAVV-EN----------------DLREA 256
Query: 390 ---DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEG 446
E + VD + + H P+ + T M S +FK + +K +R I++
Sbjct: 257 YKITEKQARYAAVDAAKAKAEEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNILDT 314
Query: 447 GRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDD 506
G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 315 GNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTGTY 374
Query: 507 EVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTI 566
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S I
Sbjct: 375 K-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVSEI 433
Query: 567 TESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSE 626
TESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G E
Sbjct: 434 TESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILGDE 487
Query: 627 DASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPS 686
D GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 488 DHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISSSR 547
Query: 687 NSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSS 746
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 548 AELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNGKE 606
Query: 747 LEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAE 806
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 607 IEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAKTT 665
Query: 807 DVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 666 DVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|B2A3A3|PNP_NATTJ Polyribonucleotide nucleotidyltransferase OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=pnp PE=3 SV=1
Length = 718
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 443/755 (58%), Gaps = 49/755 (6%)
Query: 89 PVSVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNY 148
P +V Q+ +ETG + +QA+GAV V G T++ + + P + +FFPL V+Y
Sbjct: 2 PTTVSEEIAGYQLTLETGELAKQANGAVKVQYGNTVVLVTATASKEPKDDLNFFPLTVDY 61
Query: 149 QERFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGL 208
+ER A G+ GGF KREG+ + L RL DRP+RP GF + I+S VLS D
Sbjct: 62 EERLYAVGKIPGGFIKREGKPTEKATLTARLTDRPIRPLFPDGFRNPVHIVSTVLSVDQN 121
Query: 209 HFPDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSD 268
P+ ++ A A+++S++P IA V+VG V D+ +V P E E+SQLDL++AG+
Sbjct: 122 CPPEIASIIGASAALSISDIPFDGPIASVKVGKVNDEIVVTPDVDEHEESQLDLVVAGTK 181
Query: 269 DAILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELY 328
DAI+M+E + L E+ +++A+ + +++I + LVE G+ KM + LP EL
Sbjct: 182 DAIMMVEAEANELPEDEMLEAIMKAHEEIKKIITMQEQLVEQVGQKKMEVELDLPSDELV 241
Query: 329 KHVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
VEE+A E++ KVLQIK+K+ R A+ ++KV+ L E Y S++ E
Sbjct: 242 SEVEELALEDIEKVLQIKDKLEREDAMDEAKQKVVDHLLEK-YNSEENEDEEEELKEK-- 298
Query: 389 EDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGR 448
HIK F + + +R RI+
Sbjct: 299 --------------------HIKS-----------------AFDSILKREMRSRIIHENS 321
Query: 449 RSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEV 508
R DGR IRP++ LLP HGS LFTRG+TQ L V TLG Q +D L+ +E
Sbjct: 322 RPDGRGQKEIRPVTCDVDLLPNTHGSGLFTRGQTQVLNVCTLGALGDVQILDGLDI-EES 380
Query: 509 KRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITE 568
KR+ Y+FPP SVGE G + P RREIGHG LAERAL+P++P++ DFPYTIR+ S + E
Sbjct: 381 KRYMHHYNFPPYSVGEAGFMKGPGRREIGHGALAERALKPMIPTEKDFPYTIRLVSEVLE 440
Query: 569 SNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDA 628
SNGS+SM SVC L+L DAGVPI+ +++G+AMG++ + D+ ILSDI G ED
Sbjct: 441 SNGSTSMGSVCASSLSLMDAGVPIEKAVSGIAMGLIKEGDQLA------ILSDIQGIEDF 494
Query: 629 SGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNS 688
GDMDFKVAG EDGITA QMDIK+ G T ++K+AL+Q KDG HIL M + P
Sbjct: 495 LGDMDFKVAGTEDGITALQMDIKISGTTREILKQALKQGKDGYLHILNIMKQTISEPREE 554
Query: 689 LSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLE 748
LS AP + ++ P+KI +IG GGK + II+ETGV+ ID E DG + I++ D E
Sbjct: 555 LSPLAPRVIKKQIDPDKIRNVIGPGGKMINKIIDETGVK-IDIEPDGLIYISSSDAEQAE 613
Query: 749 KSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDV 808
++ I L P VG++Y +++ YG FVEI PG+EGL HISEL+ + + K EDV
Sbjct: 614 QAIKAIDELIKEPEVGEVYLGKVVRT-EKYGAFVEILPGKEGLVHISELAEDRVGKTEDV 672
Query: 809 VKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAEN 843
KVGD + VK+I ++++G++ LSR+ L E D +
Sbjct: 673 AKVGDEILVKIINIDERGRINLSRKQALGEEDGKT 707
>sp|C5D9D5|PNP_GEOSW Polyribonucleotide nucleotidyltransferase OS=Geobacillus sp.
(strain WCH70) GN=pnp PE=3 SV=1
Length = 712
Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/743 (41%), Positives = 449/743 (60%), Gaps = 58/743 (7%)
Query: 94 IPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFS 153
I + R ++VE G + +QA+GAV V G+T++ + A ++ DFFPL VNY+ER
Sbjct: 10 IDWAGRPLVVEIGQLAKQANGAVLVRYGDTVVLNTAT-ASKEAKNVDFFPLTVNYEERLY 68
Query: 154 AAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDA 213
A G+ GGF KREGR + +L RLIDRP+RP +GF +E QI+S V+S D P+
Sbjct: 69 AVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNEVQIVSMVMSVDQDCSPEM 128
Query: 214 LAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILM 273
A+ A +A+ +S++P IAGV VG V +F++NPT ++ E S + L++AG+ DAI M
Sbjct: 129 AALFGASLALTISDIPFEGPIAGVTVGRVDGEFVINPTVEQSEKSDIHLVVAGTKDAINM 188
Query: 274 IEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEE 333
+E D + EE++++A+ G + V+ + + + GK KM + P+L + +
Sbjct: 189 VEAGADEVPEEVILEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYELDPQLEAEIRQ 248
Query: 334 IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDE 393
+A E++ + +Q+ K+ R A+ ++ V+ E+++
Sbjct: 249 LAEEDIKRAVQVPEKLARDAAIEEVKASVIA----------------------KYEEQEA 286
Query: 394 DEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGR 453
DEE T +E+ KLV +EV RR I E R DGR
Sbjct: 287 DEE---------------------TLKQVNEILHKLVKEEV-----RRLITEEKIRPDGR 320
Query: 454 FADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYL 513
D IRP+SS G+LPR HGS LFTRG+TQ L+V TLG Q +D L +E KRF
Sbjct: 321 KIDEIRPLSSEVGVLPRTHGSGLFTRGQTQVLSVCTLGALGDVQILDGL-GIEETKRFMH 379
Query: 514 QYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSS 573
Y+FPP SVGE G + P RREIGHG L ERALEPV+PS+ +FPYTIR+ S + ESNGS+
Sbjct: 380 HYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSEKEFPYTIRLVSEVLESNGST 439
Query: 574 SMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMD 633
S AS+C LA+ DAGVPIK +AG+AMG+V + D + IL+DI G ED GDMD
Sbjct: 440 SQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDNY------TILTDIQGIEDHLGDMD 493
Query: 634 FKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHA 693
FKVAG G+TA QMDIK+ G++ ++++ALQQAK GR IL M++ P LSK+A
Sbjct: 494 FKVAGTAKGVTALQMDIKIKGLSREILEEALQQAKKGRMEILEHMMQTIREPRKELSKYA 553
Query: 694 PLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAI 753
P I M++ PEKI +IG GK++ II+ETGV+ ID E DGT+ I++ + + +K+K I
Sbjct: 554 PKILTMQINPEKIREVIGPSGKQINKIIDETGVK-IDIEQDGTIFISSVNEAMNQKAKQI 612
Query: 754 ISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGD 813
I ++ VG IY ++K I +G FVE+ G++GL HISEL+ + + EDVV +GD
Sbjct: 613 IEDIVREVEVGQIYLG-KVKRIEKFGAFVELFNGKDGLVHISELAEERVGRVEDVVSIGD 671
Query: 814 LVDVKLIEVNDKGQLRLSRRALL 836
+ VK++E++ +G++ LSR+A+L
Sbjct: 672 EILVKVMEIDKQGRVNLSRKAVL 694
>sp|Q8FXS9|PNP_BRUSU Polyribonucleotide nucleotidyltransferase OS=Brucella suis biovar 1
(strain 1330) GN=pnp PE=3 SV=1
Length = 714
Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T M S +FK + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDYLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|A7GRD7|PNP_BACCN Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=pnp PE=3 SV=1
Length = 710
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/745 (41%), Positives = 448/745 (60%), Gaps = 58/745 (7%)
Query: 94 IPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFS 153
I RQ+ +ETG + +QA+GAV V G+T + S A ++ DFFPL VNY+ER
Sbjct: 10 IDLAGRQLTIETGQLAKQANGAVLVRYGDTAVL-STATASKEAKDVDFFPLTVNYEERLY 68
Query: 154 AAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDA 213
A G+ GGF KREGR + +L RLIDRP+RP GF +E Q++S V+S D +
Sbjct: 69 AVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSVDQDCSSEM 128
Query: 214 LAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILM 273
A+ + +A+++S++P IAG VG + +FI+NPT ++ E S + L++AG+ DAI M
Sbjct: 129 AAMLGSSLALSISDIPFEGPIAGATVGRIDGEFIINPTVEQQEKSDIHLVVAGTKDAINM 188
Query: 274 IEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEE 333
+E D + EE +++A+ G + ++ + + +V+ GK KM + EL K V E
Sbjct: 189 VEAGADQVPEETMLEAIMFGHEEIKRLIAFQEEIVQAVGKEKMEVKLYEVDAELEKAVRE 248
Query: 334 IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDE 393
+A +++ +Q+ K R A++ ++++V+ E++
Sbjct: 249 MAEKDMHTAIQVHEKHAREDAINEVKQRVIA------------------------HYEEQ 284
Query: 394 DEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGR 453
+ E V G+V SE+ K+V +EV RR I R DGR
Sbjct: 285 EVEAEVLGQV-------------------SEILYKIVKEEV-----RRLITVEKIRPDGR 320
Query: 454 FADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYL 513
+D IRP++S G+LPR HGS LFTRG+TQ+L++ TLG Q +D L +E KRF
Sbjct: 321 KSDEIRPLASEVGILPRTHGSGLFTRGQTQALSICTLGALGDVQILDGL-GVEESKRFMH 379
Query: 514 QYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSS 573
Y+FP SVGE + P RREIGHG L ERALEPV+PS+ DFPYT+R+ S + ESNGS+
Sbjct: 380 HYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEKDFPYTVRLVSEVLESNGST 439
Query: 574 SMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMD 633
S AS+CG LA+ DAGVP+K +AG+AMG+V + + IL+DI G ED GDMD
Sbjct: 440 SQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHY------TILTDIQGMEDHLGDMD 493
Query: 634 FKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHA 693
FKVAG G+TA QMDIK+ G++ ++++ALQQAK GR HIL ML P LS++A
Sbjct: 494 FKVAGTAKGVTALQMDIKIDGLSREILEEALQQAKVGRMHILDHMLSVIAEPRKELSEYA 553
Query: 694 PLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAI 753
P I M + P+KI +IG GK++ IIEETGV+ ID E DGTV I++ D EK+K I
Sbjct: 554 PKIITMTINPDKIRDVIGPSGKQINKIIEETGVK-IDIEQDGTVFISSIDQQMNEKAKKI 612
Query: 754 ISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGD 813
I ++ VG+IY ++K I +G FVE+ G++GL HISEL+ + K EDVVK+GD
Sbjct: 613 IEDIVREVQVGEIYLG-KVKRIEKFGAFVELFSGKDGLVHISELALERVGKVEDVVKIGD 671
Query: 814 LVDVKLIEVNDKGQLRLSRRALLPE 838
+ VK+IE++ +G++ LSR+ LL E
Sbjct: 672 EISVKVIEIDKQGRVNLSRKVLLKE 696
>sp|A5VTB6|PNP_BRUO2 Polyribonucleotide nucleotidyltransferase OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 324/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTIETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T ML + +F + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEMLAEQF--ATIFTHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|B0CK15|PNP_BRUSI Polyribonucleotide nucleotidyltransferase OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T M S +FK + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|A9M9Z8|PNP_BRUC2 Polyribonucleotide nucleotidyltransferase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T M S +FK + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|Q57A96|PNP_BRUAB Polyribonucleotide nucleotidyltransferase OS=Brucella abortus
biovar 1 (strain 9-941) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T M S +FK + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|Q2YQR3|PNP_BRUA2 Polyribonucleotide nucleotidyltransferase OS=Brucella abortus
(strain 2308) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T M S +FK + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|B2S9G0|PNP_BRUA1 Polyribonucleotide nucleotidyltransferase OS=Brucella abortus
(strain S19) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 449/758 (59%), Gaps = 70/758 (9%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I +G R + +ETG + RQA GAV T GET + +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP + G+ ++TQ++ VL +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D L++ AA A+ +S VP I+G RVG + ++++NP EM +S+LDL++AG+ +A+
Sbjct: 127 DILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHV 331
LM+E L E++++ AV G + + + +D I
Sbjct: 187 LMVESEAQELPEDVMLGAVMFGHKSFQPV----------------IDAI----------- 219
Query: 332 EEIAGEELVKVLQIKNKIPRR---KALSSLEEKVLTILSENGYVSKDETVGIVETIPDLL 388
+K+ ++ K PR + LS LE KVL ++ EN DL
Sbjct: 220 --------IKLAEVAAKEPRDFQPEDLSELEAKVLAVV-EN----------------DLR 254
Query: 389 E----DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIV 444
E E + VD + H P+ + T M S +FK + +K +R I+
Sbjct: 255 EAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEM--SAEQFATIFKHLQAKIVRWNIL 312
Query: 445 EGGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLES 504
+ G R DGR +RPI S G+LPR HGSALFTRGETQ++ V TLG + Q ID L
Sbjct: 313 DTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTG 372
Query: 505 DDEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVES 564
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYTIR S
Sbjct: 373 TYK-ESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVS 431
Query: 565 TITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITG 624
ITESNGSSSMA+VCG LAL DAGVPI +AG+AMG++ + + F +LSDI G
Sbjct: 432 EITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFA------VLSDILG 485
Query: 625 SEDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPP 684
ED GDMDFKVAG E GIT+ QMDIK+ GIT +MK AL+QAK GR HIL EM K
Sbjct: 486 DEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISS 545
Query: 685 PSNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDL 744
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI + +
Sbjct: 546 SRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSNG 604
Query: 745 SSLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAK 804
+E +K I ++ P VG+IY +K+ A +G FV R+GL HIS+L+++ +AK
Sbjct: 605 KEIEAAKKWIHSIVAEPEVGEIYEGTVVKT-ADFGAFVNFFGPRDGLVHISQLAADRVAK 663
Query: 805 AEDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAE 842
DVVK G V VKL+ +++G++RLS + + E E
Sbjct: 664 TTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKE 701
>sp|A8FDD7|PNP_BACP2 Polyribonucleotide nucleotidyltransferase OS=Bacillus pumilus
(strain SAFR-032) GN=pnp PE=3 SV=1
Length = 705
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/743 (42%), Positives = 448/743 (60%), Gaps = 58/743 (7%)
Query: 94 IPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFS 153
I + RQ+ VETG + +QA+GAV V G+T + +S + P +P DFFPL VNY+ER
Sbjct: 10 IDWAGRQLTVETGQLAKQANGAVLVRYGDTAVLSSATASKEP-KPLDFFPLTVNYEERLY 68
Query: 154 AAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDA 213
A G+ GGF KREGR + +L RLIDRP+RP GF +E Q++S V+S D +
Sbjct: 69 AVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVISIVMSVDQDCSSEM 128
Query: 214 LAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILM 273
A+ + +A+ +S++P IAGV VG V KFI+NP +++E S ++L++AG+ DAI M
Sbjct: 129 AAMFGSSLALCVSDIPFEGPIAGVTVGRVDGKFIINPNVEQLEQSDINLVVAGTKDAINM 188
Query: 274 IEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEE 333
+E D + EE +++A+ G ++ + + +V+ GK K+ + L V+
Sbjct: 189 VEAGADEVPEETMLEAIMYGHQEIKRLIEFQEEIVKAVGKAKIDIPLYEVDQTLADEVKA 248
Query: 334 IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDE 393
+A +L+K +Q+ K R A+S++++ V+ + E+ED
Sbjct: 249 LAETDLLKAIQVHEKHAREDAISAVKKAVV----------------------EKFEEEDR 286
Query: 394 DEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGR 453
DE + + +V KLV EV RR I E R DGR
Sbjct: 287 DEATIKQAK---------------------DVLNKLVKNEV-----RRLITEEKVRPDGR 320
Query: 454 FADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYL 513
D IRP+SS GLLPR HGS LFTRG+TQ+L++ TLG Q +D L +E KRF
Sbjct: 321 GVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSICTLGALGDVQILDGL-GVEESKRFMH 379
Query: 514 QYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSS 573
Y+FP SVGE G + P RREIGHG L ERALEPV+PS+ DFPYT+R+ S + ESNGS+
Sbjct: 380 HYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPSEKDFPYTVRLVSEVLESNGST 439
Query: 574 SMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMD 633
S AS+C LA+ DAGVPIK +AG+AMG+V + + +L+DI G EDA GDMD
Sbjct: 440 SQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEYY------TVLTDIQGMEDALGDMD 493
Query: 634 FKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHA 693
FKVAG G+TA QMDIK+ G++ ++++ALQQAK GR IL ML P LS++A
Sbjct: 494 FKVAGTSKGVTALQMDIKIDGLSKDILEEALQQAKKGRMEILDSMLSTIPTSRGELSRYA 553
Query: 694 PLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAI 753
P I MK+ P+KI +IG GK++ IIE+TGV+ ID E DGT+ I++ + +K+K I
Sbjct: 554 PKILTMKINPDKIRDVIGPSGKQINKIIEDTGVK-IDIEQDGTIFISSTEEDMNQKAKKI 612
Query: 754 ISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGD 813
I +L VG +Y ++K I +G F+EI G++GL HISEL+ + + K EDVVK+GD
Sbjct: 613 IEDLVREVEVGQLYLG-KVKRIEKFGAFLEIFSGKDGLVHISELALDRVGKVEDVVKIGD 671
Query: 814 LVDVKLIEVNDKGQLRLSRRALL 836
+ VK+ E++ +G++ LSR+A+L
Sbjct: 672 ELLVKVTEIDKQGRVNLSRKAVL 694
>sp|A7Z4U0|PNP_BACA2 Polyribonucleotide nucleotidyltransferase OS=Bacillus
amyloliquefaciens (strain FZB42) GN=pnp PE=3 SV=1
Length = 707
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/743 (42%), Positives = 447/743 (60%), Gaps = 58/743 (7%)
Query: 94 IPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERFS 153
I + RQ+ VE G + +QA+GAV V G+T + ++ + P +P DFFPL VNY+ER
Sbjct: 10 IDWAGRQLTVEAGQLAKQANGAVMVRYGDTAVLSTATASKEP-KPLDFFPLTVNYEERLY 68
Query: 154 AAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPDA 213
A G+ GGF KREGR + VL RLIDRP+RP GF +E Q++S V+S D +
Sbjct: 69 AVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSVDQDCSSEM 128
Query: 214 LAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAILM 273
A+ + +A+ +S++P IAGV VG + KF++NPT ++E S ++L++AG+ DAI M
Sbjct: 129 AAMFGSSLALCVSDIPFEGPIAGVTVGRIDGKFVINPTVDQLEKSDINLIVAGTKDAINM 188
Query: 274 IEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGKPKMLDTIKLPPPELYKHVEE 333
+E D + EE++++A+ G + ++ + + +V GK K + EL + V+
Sbjct: 189 VEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKTEIELYEIDEELSEKVKS 248
Query: 334 IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDEDE 393
+A +L+ +Q+ K R A++ ++ N V+K E+E+
Sbjct: 249 LAEPDLLSAIQVHEKHAREDAINEVK---------NAVVAK-------------FEEEEH 286
Query: 394 DEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSDGR 453
DE+ + K S KLV EV RR I E R DGR
Sbjct: 287 DEDTI-----------------KKVKQTLS----KLVKNEV-----RRLITEEKVRPDGR 320
Query: 454 FADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRFYL 513
D IRP+SS GLLPR HGS LFTRG+TQ+L+V TLG Q +D L +E KRF
Sbjct: 321 GVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGALGDVQILDGL-GVEESKRFMH 379
Query: 514 QYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNGSS 573
Y+FP SVGE G + P RREIGHG L ERALEPV+P++ DFPYT+R+ S + ESNGS+
Sbjct: 380 HYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPNEKDFPYTVRLVSEVLESNGST 439
Query: 574 SMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGDMD 633
S AS+C LA+ DAGVPIK +AG+AMG+V + + +L+DI G EDA GDMD
Sbjct: 440 SQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEYY------TVLTDIQGMEDALGDMD 493
Query: 634 FKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSKHA 693
FKVAG E G+TA QMDIK+ G++ ++++ALQQAK GR IL ML LS++A
Sbjct: 494 FKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLSTLGESRKELSQYA 553
Query: 694 PLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSKAI 753
P I M + P+KI +IG GK++ IIE+TGV+ ID E DGT+ I++ D SS +K+K I
Sbjct: 554 PKILTMNINPDKIRDVIGPSGKQINKIIEDTGVK-IDIEQDGTIFISSTDESSNQKAKKI 612
Query: 754 ISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKVGD 813
I +L VG +Y ++K I +G FVEI G++GL HISEL+ + K EDVVK+GD
Sbjct: 613 IEDLVREVEVGQLYLG-KVKRIEKFGAFVEIFSGKDGLVHISELALERVGKVEDVVKIGD 671
Query: 814 LVDVKLIEVNDKGQLRLSRRALL 836
+ VK+ E++ +G++ LSR+A+L
Sbjct: 672 EILVKVTEIDKQGRVNLSRKAVL 694
>sp|A6UF34|PNP_SINMW Polyribonucleotide nucleotidyltransferase OS=Sinorhizobium medicae
(strain WSM419) GN=pnp PE=3 SV=1
Length = 714
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 318/749 (42%), Positives = 448/749 (59%), Gaps = 66/749 (8%)
Query: 92 VKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQER 151
V+I + R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE+
Sbjct: 7 VEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLTVNYQEK 66
Query: 152 FSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFP 211
AAG+ GG+FKREGR ++E LV RLIDRP+RP +G+ ++TQ++ V+ +D + P
Sbjct: 67 TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVIITVMQHDLENNP 126
Query: 212 DALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAI 271
D +A+ AA A+ LS VP + G RVG + ++++NP EM++S LDL++AG+ DA+
Sbjct: 127 DVVAMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESTLDLVVAGTQDAV 186
Query: 272 LMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKH 330
LM+E LSEE+++ AV GQ + + + V L E+ K P+ + P+ +
Sbjct: 187 LMVESEAKELSEEIMLGAVVFGQKGFQPVIDAVIRLAEVAAKEPREFE------PDDHSA 240
Query: 331 VEE----IAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPD 386
+E IA E+L K +I K R A+ +++ KV
Sbjct: 241 LENAMLSIAEEDLRKAYKITEKAQRYAAVDAVKAKVKE---------------------- 278
Query: 387 LLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEG 446
H P+ ++ P +E ++ VFK + +K +R I++
Sbjct: 279 ----------------------HFLPEGVEN-PAHTAE-EIASVFKHLQAKIVRWNILDT 314
Query: 447 GRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDD 506
R DGR +RPI + GLLPR HGSALFTRGETQ++ V TLG + Q +D+L
Sbjct: 315 KSRIDGRDLVTVRPIVAEVGLLPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGMY 374
Query: 507 EVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTI 566
+ + F L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYT+RV S I
Sbjct: 375 K-ENFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTAEQFPYTLRVVSEI 433
Query: 567 TESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSE 626
TESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++ + D F +LSDI G E
Sbjct: 434 TESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDDRFA------VLSDILGDE 487
Query: 627 DASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPS 686
D GDMDFKVAG E G+T+ QMDIK+ GIT +MK AL QAK GR HIL EM K
Sbjct: 488 DHLGDMDFKVAGTEAGVTSLQMDIKIAGITEEIMKVALDQAKHGRVHILGEMAKAISESR 547
Query: 687 NSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSS 746
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ +DDGTVKI +
Sbjct: 548 GQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAK-INIDDDGTVKIASASGKE 606
Query: 747 LEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAE 806
+E ++ I ++ P VG +Y +K+ A +G FV R+GL HIS+L+S +AK
Sbjct: 607 IEAARKWIHSIVAEPEVGQVYEGTVVKT-ADFGAFVNFFGARDGLVHISQLASERVAKTT 665
Query: 807 DVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
DVVK GD V VKL+ +++G++RLS + +
Sbjct: 666 DVVKEGDKVWVKLMGFDERGKVRLSMKVV 694
>sp|A7IC03|PNP_XANP2 Polyribonucleotide nucleotidyltransferase OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=pnp PE=3
SV=1
Length = 730
Score = 552 bits (1423), Expect = e-156, Method: Compositional matrix adjust.
Identities = 316/744 (42%), Positives = 449/744 (60%), Gaps = 57/744 (7%)
Query: 93 KIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQERF 152
++ +G R + +ETG M RQA G+V T G+T + +V A P DFFPL VNYQE+
Sbjct: 8 ELDWGGRTLTLETGKMARQADGSVLATYGDTKVLATVVSAREPKPGQDFFPLTVNYQEKT 67
Query: 153 SAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHFPD 212
AAGR GG+FKREGR + E LV RLIDRP+RP +G+ +TQ++ VL++D + PD
Sbjct: 68 YAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKCDTQVVITVLAHDLENDPD 127
Query: 213 ALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDAIL 272
+A+ AA A+ LS VP + RVG + +++++NPT E+++S L+L++AG+ DA+L
Sbjct: 128 VVAMVAASAALTLSGVPFMGPVGAARVGFIDNEYVLNPTVDEVKESALELVVAGTGDAVL 187
Query: 273 MIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYKHV 331
M+E L EE+++ AV G + + + L E K P+ + E+ V
Sbjct: 188 MVESEAKELPEEIMLGAVMFGHRHFQPVIEAIIKLAEKAAKEPRNFQPADVS--EVESKV 245
Query: 332 EEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLEDE 391
EIA +L +IK K R A+ + + KV
Sbjct: 246 REIAEADLRAAYKIKQKQDRYAAVGAAKSKVKKYY------------------------- 280
Query: 392 DEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRRSD 451
EE+ +DG ++ T + S+V K + +K +R I++ G R D
Sbjct: 281 ---EELALDG------------TKVPTAQVVSDV-----LKALEAKIVRWNILDDGIRID 320
Query: 452 GRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVKRF 511
GR +RPI S G+LPRAHGSALFTRGETQ+L V TLG + Q ID+LE + + F
Sbjct: 321 GRDVYTVRPIVSEVGILPRAHGSALFTRGETQALVVATLGTGEDEQFIDSLEGTYK-EHF 379
Query: 512 YLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITESNG 571
L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ ++FPYT+RV S I ESNG
Sbjct: 380 LLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAKHEFPYTLRVVSEILESNG 439
Query: 572 SSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDASGD 631
SSSMA+VCG LAL DAGVP++ +AG+AMG++L+ ++F +LSDI G ED GD
Sbjct: 440 SSSMATVCGTSLALMDAGVPLRRPVAGIAMGLILEGEKFA------VLSDILGDEDHLGD 493
Query: 632 MDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSLSK 691
MDFKVAG E G+T+ QMDIK+ GIT +MK AL QAKDGR HIL EM K L +
Sbjct: 494 MDFKVAGTEQGVTSLQMDIKIAGITEEIMKVALTQAKDGRVHILGEMAKALTTARAELGE 553
Query: 692 HAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLSSLEKSK 751
HAP I +MK+ +KI +IGSGGK ++ I+E+TG + I+ EDDGT+KI + +++ +
Sbjct: 554 HAPRIEVMKIAVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTIKIASASGDAIKAAI 612
Query: 752 AIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKAEDVVKV 811
I ++ P VG IY +K + +G FV ++GL H+S++++ +AK DVVK
Sbjct: 613 NWIKSIASEPEVGQIYEGTVVK-VVDFGAFVNFFGSKDGLVHVSQMANERVAKPSDVVKE 671
Query: 812 GDLVDVKLIEVNDKGQLRLSRRAL 835
GD V VKL+ +++G+ RLS + +
Sbjct: 672 GDKVKVKLMGFDERGKTRLSMKVV 695
>sp|Q67P77|PNP_SYMTH Polyribonucleotide nucleotidyltransferase OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=pnp PE=3 SV=1
Length = 762
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 310/759 (40%), Positives = 441/759 (58%), Gaps = 61/759 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
S + G R + +ETG + +QASG+V V G++++ + + P E DFFPL V+Y+E
Sbjct: 20 SFSMELGGRTMTLETGRLAKQASGSVLVNYGDSVVLCTAVGSATPREGVDFFPLTVDYEE 79
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
R + GR G +F+REGR +L RL DRP+RP +GF ++ Q++ VLS D H
Sbjct: 80 RMYSVGRIPGNWFRREGRPTSKAILWARLTDRPIRPLFPEGFRNDVQVVCTVLSVDPDHP 139
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
+ + + A A+ +S++P I GV VGLV +F++NPT ++ E S++ L++AG++ A
Sbjct: 140 VEIMGMIGASAALTISDIPFEGPIGGVIVGLVDGQFVINPTAEQQERSEMHLVVAGTEHA 199
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVRE-ISNEVKALVEMCGKPKMLDTIKLPPPELYK 329
+LM+E + E+ ++ A+ G + ++ I +K + GKPK + PPPEL +
Sbjct: 200 VLMVEAGAKEVPEQTMLDAILFGHEVIKNTIIPTIKQMQAEVGKPKREVVLFNPPPELEQ 259
Query: 330 HVEEIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIPDLLE 389
V E A L + ++ +K+ R +A++++ E V L+E P+
Sbjct: 260 AVREAATVRLREAVRNPDKLAREEAVAAVGEAVQAELAEQ--------------FPE--- 302
Query: 390 DEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVEGGRR 449
SE + + K+V + +RR I+E G R
Sbjct: 303 ---------------------------------SEKHIAYLLKKVLKEEVRRAIIEEGIR 329
Query: 450 SDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESDDEVK 509
DGR IRPI LLPR HGS LF RG+TQ L++ TLG Q++D+L + +E K
Sbjct: 330 PDGRSLTEIRPIECAVDLLPRPHGSGLFQRGQTQVLSICTLGTLGDMQKLDDL-TLEETK 388
Query: 510 RFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVESTITES 569
RF Y+FPP SVGE + P RREIGHG LAERALEPV+P + +FPYTIRV S + ES
Sbjct: 389 RFMHHYNFPPYSVGETRPLRGPGRREIGHGALAERALEPVIPPEEEFPYTIRVVSEVLES 448
Query: 570 NGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGSEDAS 629
NGSSSMASVCG LAL AGVPIK +AGVAMG+V D + G +L+DI G EDA
Sbjct: 449 NGSSSMASVCGSTLALMAAGVPIKAPVAGVAMGLVEDPE----TGRYAVLTDIQGIEDAL 504
Query: 630 GDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPPSNSL 689
GDMDFKVAG + G+TA QMD+K+ G + +++KAL QA++GR I+ +ML C P L
Sbjct: 505 GDMDFKVAGTKKGVTALQMDMKISGTSREILEKALMQAREGRMFIMEKMLACISEPRKEL 564
Query: 690 SKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVE----AIDTEDDGTVKITAKDLS 745
S AP I MK+ PEKI +IG GG + IIEET V ID +DDGT+ I A +L
Sbjct: 565 SPWAPRIITMKISPEKIRDVIGKGGSTINKIIEETKVGHTKVEIDIQDDGTIYIAAVNLE 624
Query: 746 SLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKA 805
+ E+++ +I L P G IY + + +G FVEI PG+EGL HISELS +A+
Sbjct: 625 AGERARQMIEALVKDPEPGMIY-TGRVTRLMQFGAFVEILPGKEGLVHISELSDKRVARV 683
Query: 806 EDVVKVGDLVDVKLIEVNDKGQLRLSRRALLPEADAENP 844
EDVV +GD V VK+ E++ G++ LS + +P+ A P
Sbjct: 684 EDVVNIGDEVTVKVTEIDRLGRINLSIKDAMPKQAASQP 722
>sp|B9JGS9|PNP_AGRRK Polyribonucleotide nucleotidyltransferase OS=Agrobacterium
radiobacter (strain K84 / ATCC BAA-868) GN=pnp PE=3 SV=1
Length = 710
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 314/750 (41%), Positives = 441/750 (58%), Gaps = 67/750 (8%)
Query: 91 SVKIPFGDRQILVETGHMGRQASGAVTVTDGETIIYTSVCLADVPSEPSDFFPLNVNYQE 150
+V+I + R + +ETG + RQA GAV T GET++ +V A P DFFPL VNYQE
Sbjct: 6 TVEIEWAGRPLKLETGKIARQADGAVMATYGETVVLATVVSAKSPKPGQDFFPLTVNYQE 65
Query: 151 RFSAAGRTSGGFFKREGRTKDHEVLVCRLIDRPLRPTLIKGFYHETQILSWVLSYDGLHF 210
+ AAG+ GG+FKREGR + E LV RLIDRP+RP +G+ ++TQ++ V+ +D +
Sbjct: 66 KTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQHDLEND 125
Query: 211 PDALAVTAAGIAVALSEVPNSKVIAGVRVGLVGDKFIVNPTTQEMEDSQLDLLLAGSDDA 270
PD L++ A A+ LS VP I G RVG + ++++NP EM++S LDL++AG+ +A
Sbjct: 126 PDILSMVATSAALTLSGVPFMGPIGGARVGYINGEYVLNPHLDEMDESSLDLVVAGTQEA 185
Query: 271 ILMIEGYCDFLSEEMLIQAVQVGQDAVREISNEVKALVEMCGK-PKMLDTIKLPPPELYK 329
+LM+E LSE++++ AV G + + + + L E+ K P+ PE +
Sbjct: 186 VLMVESEAKELSEDVMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPRDFQ------PEDHS 239
Query: 330 HVE----EIAGEELVKVLQIKNKIPRRKALSSLEEKVLTILSENGYVSKDETVGIVETIP 385
+E IA EL + K R A+ +++ KV
Sbjct: 240 ALEAEMLSIAEGELRTAYKNTQKAERYAAVDAVKAKV----------------------- 276
Query: 386 DLLEDEDEDEEVVVDGEVDEGDVHIKPKSRKSTPMLFSEVDVKLVFKEVTSKFLRRRIVE 445
H P+ + P +EV + VFK + +K +R I++
Sbjct: 277 ---------------------KAHFFPEGVE--PKYSAEV-IGAVFKHLQAKIVRWNILD 312
Query: 446 GGRRSDGRFADGIRPISSRCGLLPRAHGSALFTRGETQSLAVITLGDKQMAQRIDNLESD 505
R DGR +R I S G+LPR HGS+LFTRGETQ++ V TLG + Q +D+L
Sbjct: 313 TKSRIDGRDLSTVRAIVSEVGVLPRTHGSSLFTRGETQAIVVATLGTGEDEQYVDSLTGM 372
Query: 506 DEVKRFYLQYSFPPSSVGEVGRIGAPSRREIGHGTLAERALEPVLPSDNDFPYTIRVEST 565
+ +RF L Y+FPP SVGE GR+G+P RREIGHG LA RA+ P+LP+ FPYT+RV S
Sbjct: 373 YK-ERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVRPMLPTAEQFPYTLRVVSE 431
Query: 566 ITESNGSSSMASVCGGCLALQDAGVPIKCSIAGVAMGMVLDTDEFGGDGTPLILSDITGS 625
ITESNGSSSMA+VCG LAL DAGVP+ +AG+AMG++ + + F +LSDI G
Sbjct: 432 ITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDERFA------VLSDILGD 485
Query: 626 EDASGDMDFKVAGNEDGITAFQMDIKVGGITLPVMKKALQQAKDGRRHILAEMLKCSPPP 685
ED GDMDFKVAG + GITA QMDIK+ GIT +M AL QAK GR HIL EM K
Sbjct: 486 EDHLGDMDFKVAGTDGGITALQMDIKIEGITEEIMNVALNQAKGGRLHILGEMAKAISES 545
Query: 686 SNSLSKHAPLIHIMKVKPEKINLIIGSGGKKVKSIIEETGVEAIDTEDDGTVKITAKDLS 745
L + AP I +M + +KI +IGSGGK ++ I+E+TG + I+ EDDGTVKI +
Sbjct: 546 RGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAK-INIEDDGTVKIASSSGK 604
Query: 746 SLEKSKAIISNLTMVPTVGDIYRNCEIKSIAPYGVFVEIAPGREGLCHISELSSNWLAKA 805
+E ++ I ++ P VG IY +K+ A +G FV R+GL HIS+L+S +AK
Sbjct: 605 EIEAARKWIHSIVAEPEVGQIYEGTVVKT-ADFGAFVNFFGARDGLVHISQLASERVAKT 663
Query: 806 EDVVKVGDLVDVKLIEVNDKGQLRLSRRAL 835
+DVVK GD V VKL+ +++G++RLS + +
Sbjct: 664 QDVVKEGDKVWVKLLGFDERGKVRLSMKVV 693
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,858,368
Number of Sequences: 539616
Number of extensions: 15544177
Number of successful extensions: 46405
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 433
Number of HSP's that attempted gapping in prelim test: 39744
Number of HSP's gapped (non-prelim): 2834
length of query: 916
length of database: 191,569,459
effective HSP length: 127
effective length of query: 789
effective length of database: 123,038,227
effective search space: 97077161103
effective search space used: 97077161103
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)