Your job contains 1 sequence.
>002490
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG
STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF
IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ
QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI
FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK
MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL
GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGAVDEEEEAVEGD
WGEELDMVDVDGLQNGDVAAILEDGEVAEEGEEEEGGWDLEDLELPPEAETPKAPVNARS
AVFGATLICVHFHQLQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002490
(916 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 4021 0. 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 4004 0. 1
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 2828 1.6e-294 1
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 2825 3.2e-294 1
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 2825 3.2e-294 1
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 2824 4.1e-294 1
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 2823 5.3e-294 1
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 2744 1.2e-285 1
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 2738 5.3e-285 1
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 2701 4.5e-281 1
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 2696 1.5e-280 1
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 2696 1.5e-280 1
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 2467 2.8e-256 1
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 2452 1.1e-254 1
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 2425 7.9e-252 1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 2314 4.6e-240 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 2170 8.3e-225 1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 2058 6.1e-213 1
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 441 8.8e-69 2
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 439 1.4e-68 2
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 437 2.4e-68 2
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 436 3.0e-68 2
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 435 4.0e-68 2
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 435 4.0e-68 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 429 3.9e-67 2
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 418 3.1e-66 2
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 381 8.3e-65 2
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 416 1.9e-63 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 439 2.1e-63 2
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 355 5.5e-61 3
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 411 7.6e-61 2
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 360 1.2e-60 2
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 376 1.3e-60 2
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 388 1.3e-60 2
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 350 5.2e-57 3
RGD|1310525 - symbol:Copa "coatomer protein complex subun... 454 4.2e-42 1
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 307 1.8e-27 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 341 3.5e-27 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 338 1.6e-25 3
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 297 3.4e-25 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 297 2.4e-24 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 297 2.4e-24 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 297 2.4e-24 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 297 2.4e-24 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 297 2.4e-24 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 297 2.4e-24 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 297 2.4e-24 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 297 2.4e-24 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 296 3.5e-24 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 295 5.6e-24 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 294 7.9e-24 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 309 1.7e-23 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 236 3.0e-23 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 289 4.4e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 242 4.7e-23 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 290 4.8e-23 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 276 6.1e-23 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 210 9.7e-23 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 274 1.0e-22 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 285 1.6e-22 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 189 1.9e-22 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 271 2.1e-22 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 292 2.1e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 242 3.4e-22 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 242 3.4e-22 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 242 3.4e-22 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 242 3.4e-22 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 242 3.4e-22 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 228 5.3e-22 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 266 7.2e-22 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 289 8.4e-22 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 279 9.0e-22 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 233 2.3e-21 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 274 3.5e-21 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 273 6.9e-21 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 271 8.1e-21 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 256 8.4e-21 1
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 269 8.9e-21 1
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 189 1.1e-20 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 235 1.3e-20 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 269 1.4e-20 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 268 1.7e-20 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 252 2.3e-20 1
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 270 7.3e-20 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 272 1.6e-19 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 260 2.6e-19 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 256 5.7e-19 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 261 1.0e-18 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 256 2.0e-18 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 256 2.0e-18 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 255 2.6e-18 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 196 2.8e-18 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 250 2.8e-18 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 254 3.3e-18 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 191 3.4e-18 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 249 3.7e-18 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 254 3.9e-18 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 254 3.9e-18 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 212 4.4e-18 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 254 4.8e-18 1
WARNING: Descriptions of 1050 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 4021 (1420.5 bits), Expect = 0., P = 0.
Identities = 761/903 (84%), Positives = 815/903 (90%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH KRPWILASLHSGVIQLWDYRMGTLIDRFDEH+GPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
SQPLFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTC+SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDI+R
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
L+QMN+DLFGGVDA+VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
Sbjct: 181 LTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVS VMFHAKQDIIVSNSEDKSIRVWD TKRTG+QTFRREHDRFWILA HP
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
EMNLLAAGHDSGMIVFKLERERPAFA+SGDSLFYAKDRFLRYYE+STQ+D+QVIPIRRPG
Sbjct: 301 EMNLLAAGHDSGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQRDSQVIPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
+ SLNQSPRTLSYSPTENAVLICSD+DGGSYELY+IPKDS+GR D VQDAK+G GGSA+F
Sbjct: 361 TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF 420
Query: 421 IARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
IARNRFAVL+KS++Q S LPI DAIFYAGTGNLLCR+ED+VVIFDLQ
Sbjct: 421 IARNRFAVLEKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRLVLG+LQTPFV+YVVWS+DMESVALLSKH IIIASKKLV QCTLHETIRVKSGAWDDN
Sbjct: 481 QRLVLGELQTPFVRYVVWSSDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKN+AI I+ATEYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKLSLLRKRYDHVMSMI+NSQLCGQAMIAYLQQKGFPEVALHFV+DER RFNLALESGNI
Sbjct: 601 FKLSLLRKRYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
+AVASA +I+EKDHWYRLGVEALRQGN+GIVE+AYQ+TKNFERLSFLYLITGN+DKLSK
Sbjct: 661 SVAVASATQINEKDHWYRLGVEALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSK 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
++KIAEVKN+VMGQFHNALYLGDVKERVKILE+AGHLPLAYITASVHGL D+AERLA EL
Sbjct: 721 LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDIAERLATEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGXXXXXXXXXXXX 840
GDNVPS+PEGK PSLLMPP+P++C GDWPLLRVMKGIFEGGL++ RG
Sbjct: 781 GDNVPSLPEGKTPSLLMPPTPIMCGGDWPLLRVMKGIFEGGLESADRGGTVDEEDVEGDW 840
Query: 841 XXXXLDMVDVDGLQNGDVAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXAETPKAPVNARS 900
LD ++VDG++N D+ I +TPKA NARS
Sbjct: 841 GEE-LD-INVDGMENRDIEDILAAAEAGEEENDEEGGWGLEDLVLPPELDTPKASANARS 898
Query: 901 AVF 903
+VF
Sbjct: 899 SVF 901
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 4004 (1414.5 bits), Expect = 0., P = 0.
Identities = 757/903 (83%), Positives = 810/903 (89%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH KRPWILASLHSGVIQLWDYRMGTLIDRFDEH+GPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
SQPLFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHE PWIVSASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL+KK+ SPADD++R
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
SQMN+DLFGGVDA+VKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMNETKAWE
Sbjct: 181 FSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVS VMFHAKQDIIVSNSEDKSIRVWD TKRTG+QTFRREHDRFWILA HP
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
E+NLLAAGHD+GMIVFKLERERPAFA+SGDSLFYAKDRFLRYYE+STQKD+QVIPIRRPG
Sbjct: 301 EINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
+ SLNQSPRTLSYSPTENAVLICSD+DGGSYELY+IPKDS+GR D VQDAK+G GGSA+F
Sbjct: 361 TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF 420
Query: 421 IARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
IARNRFAVL+KS++Q S LPI DAIFYAGTGNLLCR+ED+VVIFDLQ
Sbjct: 421 IARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRLVLG+LQTPFV+YVVWSNDMESVALLSKH IIIASKKLV QCTLHETIRVKSGAWDDN
Sbjct: 481 QRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAI I+ATEYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKL+LLRK+YDHVMSMI+NSQLCGQAMIAYLQQKGFPEVALHFV+DER RFNLALESGNI
Sbjct: 601 FKLALLRKKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
+AVASA EI+EKDHWYRLGVEALRQGN+ IVE+AYQ+TKNFERLSFLYLITGN+DKLSK
Sbjct: 661 SVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSK 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
++KIAEVKN+VMGQFHNALYLGDVKERVKILE+AGHLPLAYITASVHGL D+AERLA EL
Sbjct: 721 LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLTDIAERLAIEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGXXXXXXXXXXXX 840
GDNVPS+PEGK PSLLMPPSP++C GDWPLLRVMKGIFEGGL++ RG
Sbjct: 781 GDNVPSLPEGKTPSLLMPPSPIMCGGDWPLLRVMKGIFEGGLESANRGAVDEEEEDVEGD 840
Query: 841 XXXXLDMVDVDGLQNGDVAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXAETPKAPVNARS 900
LD DVDG++N D+ AI +TPKA NARS
Sbjct: 841 WGEGLDKFDVDGMENTDIEAILDGAEAGEEEDDEEGGWGLDLDLPPEL-DTPKASANARS 899
Query: 901 AVF 903
+ F
Sbjct: 900 STF 902
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 2828 (1000.6 bits), Expect = 1.6e-294, P = 1.6e-294
Identities = 529/837 (63%), Positives = 652/837 (77%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQV-P-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKG 828
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 2825 (999.5 bits), Expect = 3.2e-294, P = 3.2e-294
Identities = 529/837 (63%), Positives = 652/837 (77%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQV-P-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKG 828
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 2825 (999.5 bits), Expect = 3.2e-294, P = 3.2e-294
Identities = 528/837 (63%), Positives = 652/837 (77%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R +
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQV-P-NCDEIFYAGTGNLLLRDAES 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ENLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKG 828
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 2824 (999.2 bits), Expect = 4.1e-294, P = 4.1e-294
Identities = 528/837 (63%), Positives = 652/837 (77%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQV-P-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY++A+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLSAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKG 828
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 2823 (998.8 bits), Expect = 5.3e-294, P = 5.3e-294
Identities = 528/837 (63%), Positives = 653/837 (78%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P ++SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADTQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R +
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQV-P-NCDEIFYAGTGNLLLRDAES 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKG 828
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 2744 (971.0 bits), Expect = 1.2e-285, P = 1.2e-285
Identities = 522/836 (62%), Positives = 646/836 (77%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWILASLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP-ADDIL 179
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP A D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE 180
Query: 180 RLSQMNTDLFGGVDAVVKYVLE-GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
DLFG DAVVK+VLE GHDRGVNWAAFHP++PLIVSGADDRQVK+WRMNE+KA
Sbjct: 181 VRGISGVDLFGASDAVVKHVLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKA 240
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS 298
WE+DT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+L +
Sbjct: 241 WELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGA 300
Query: 299 HPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRR 358
HP +NL AAGHDSGM+VFKLERERPA+AV G+ L+Y KDRFLR +F++ KDT V+ +R
Sbjct: 301 HPNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRS 360
Query: 359 PGSTSLNQSPR-TLSYSPTENAVLICS---DVDGGSYELYVIPKDSIGRGDSVQDAKKGL 414
GS + P ++SY+P ENAVL+C+ +++ +Y+LY IP++S + + K+
Sbjct: 361 -GS----KFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSS 415
Query: 415 GGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRV 474
G +A+++ARNRFAVLD+ + + P + + IFYAGTG+LL R + V
Sbjct: 416 GLTAVWVARNRFAVLDRMHSLLIKNLKNEIVKKVQV-P-SCEEIFYAGTGSLLLRDAEGV 473
Query: 475 VIFDLQQRLVLGDLQTPFVKYVVWSNDMES-VALLSKHAIIIASKKLVHQCTLHETIRVK 533
+FD+QQ+ L ++ VKYVVWS+D + LL+KHAI+I +KKL C +HE IRVK
Sbjct: 474 TLFDVQQKRSLATVKIAKVKYVVWSSDCQPREPLLAKHAIMICNKKLESLCNIHENIRVK 533
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAW +N VFIYTT NHIKY L +GD GIIRTLD+PIY+T+V GN+++CLDR+ + R +
Sbjct: 534 SGAWAENEVFIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLD 593
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TEY FKL+L+ ++Y+ V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 594 IDPTEYRFKLALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 653
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI++A+ +AK +DE+ W RLG AL QG+ +VE YQRTKNF++L+FLYLITG
Sbjct: 654 ALECGNIEVALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITG 713
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N+ KL KM+KIAE++ D+ G + ALYLGDV ERV+IL++ G LAY+TA+ HG+ + A
Sbjct: 714 NLTKLRKMMKIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEA 773
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPV-VCSGDWPLLRVMKGIFEGGLDNIGR 827
E L VPE LL PP P+ +WPLL V KG FEG + GR
Sbjct: 774 EALKETFDLEKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGR 829
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 2738 (968.9 bits), Expect = 5.3e-285, P = 5.3e-285
Identities = 512/826 (61%), Positives = 638/826 (77%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
+K LSFH KRPWIL+SLH+GVIQLW TLID+FDEHDGPVRG+ FHK QPLFVSGGD
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
DYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+WNWQSRTC+ VL
Sbjct: 62 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 121
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DDILRLSQMNTDL 188
TGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D+ ++ DL
Sbjct: 122 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT--GVDL 179
Query: 189 FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
FG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+KAWEVDT RGH
Sbjct: 180 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 239
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA+HP +NL AAG
Sbjct: 240 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAG 299
Query: 309 HDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPGSTSLNQSP 368
HD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R GS + P
Sbjct: 300 HDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRS-GS----KFP 354
Query: 369 R-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFIARN 424
+SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+ G +A+++ARN
Sbjct: 355 VFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARN 414
Query: 425 RFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLV 484
RFAVLD+ + + P D IFYAGTGNLL R + + +FD+QQ+
Sbjct: 415 RFAVLDRMHSLLIKNLKNEITKKVQV-P-NCDEIFYAGTGNLLLRDAESITLFDVQQKRT 472
Query: 485 LGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFI 544
L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVKSGAWD++GVFI
Sbjct: 473 LASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFI 532
Query: 545 YTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYIFKLS 604
YTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R + ID TE+ FKL+
Sbjct: 533 YTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLA 592
Query: 605 LLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAV 664
L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+LALE GNI+IA+
Sbjct: 593 LINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIAL 652
Query: 665 ASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKI 724
+AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITGN++KL KM+KI
Sbjct: 653 EAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKI 712
Query: 725 AEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNV 784
AE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + AE L
Sbjct: 713 AEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDPEK 772
Query: 785 PSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 773 ETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKG 818
Score = 265 (98.3 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ KF+ V+G+ FH ++P ++ I++W+Y++ + H +R FH
Sbjct: 33 LIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH 92
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
P +S DD I+VWN++ C+ L GH Y+ QFH +VSAS DQT+R+W
Sbjct: 93 HEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 152
Query: 121 NWQS--RTCIS--VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT---VS 173
+ + +S + + D VV L+ R + A VS
Sbjct: 153 DISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVS 212
Query: 174 PADDI-LRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
ADD +++ +MN VD GH V+ A FHP LI+S ++D+ +++W
Sbjct: 213 GADDRQVKIWRMNESKAWEVDTC-----RGHYNNVSCAVFHPRQELILSNSEDKSIRVWD 267
Query: 233 MNETKAWEVDTLR 245
M+ K V T R
Sbjct: 268 MS--KRTGVQTFR 278
Score = 43 (20.2 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 598 EYIFKLSL-LRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALE 656
EYI L + + ++ ++ + ++C M AY V H + RT NL +
Sbjct: 1049 EYIVGLCMEIERKKLPKETLEQQKRIC--EMAAYFTHSNLQPV--HMILVLRTALNLFFK 1104
Query: 657 SGNIQIAVASAKEIDE 672
N + A A+ + E
Sbjct: 1105 LKNFKTAATFARRLLE 1120
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 2701 (955.9 bits), Expect = 4.5e-281, P = 4.5e-281
Identities = 515/831 (61%), Positives = 634/831 (76%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLT FE+KS RVKGLSFH KRPWIL SLHSGVIQLWDYRM TL+++FDEHDGPVRGV FH
Sbjct: 1 MLTNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+ PLFVSGGDDYKIKVWNYK RC+FTLL HLDY+RTV FHHEYPWI+SASDDQTIRIW
Sbjct: 61 QQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA----D 176
NWQSR CI VLTGHNHYVMCA FHP ED +VSASLDQTVRVWDI LRKK V+P D
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLD 180
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
D L+ TDLFG DAVVK+VLEGHDRG NWA+FHPTLPLIVSGADDR VKLWRMNE
Sbjct: 181 DHLKGHPGATDLFGQADAVVKHVLEGHDRGFNWASFHPTLPLIVSGADDRLVKLWRMNEY 240
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
KAWEVDT RGH NNVS V+FH +QD+I+SN ED+SIRVWD+TKR + TFRR+++RFWIL
Sbjct: 241 KAWEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFRRDNERFWIL 300
Query: 297 ASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPI 356
+HP +NL AAGHD GM+VFKLERERPA+AV G+ L+Y K+RFLR +F+T KDT V+ +
Sbjct: 301 TAHPTLNLFAAGHDGGMVVFKLERERPAYAVHGNILYYVKERFLRKLDFTTTKDTVVMQL 360
Query: 357 RRPGSTSLNQSPRTLSYSPTENAVLICS---DVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
R PG + + ++SY+P NAVLIC+ +++ +Y+L IPKD+ + +S D+K+
Sbjct: 361 R-PGKSPVY----SMSYNPALNAVLICTRTNNLENSTYDLCQIPKDTESQSES--DSKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +AI++ARNRFAVLD+ NQ LP + IFYAGTG LL R +
Sbjct: 414 SGITAIWVARNRFAVLDR--NQQLVIKNFKNEVTKK-LPTFCEEIFYAGTGMLLIRDPEF 470
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
V ++++Q+ + +G ++ +YVVWS DM VALL KH++ I ++L + CT+ E RVK
Sbjct: 471 VTLYEVQRLVSVGSIKLAKCRYVVWSPDMSLVALLCKHSVTICDRRLQYLCTVQENCRVK 530
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + NGD GIIRTLD+PIY+T+V GN +FCLDR+ + R +
Sbjct: 531 SGAWDESGVFIYTTSNHIKYAITNGDHGIIRTLDLPIYLTRVKGNQVFCLDRECRTRVLH 590
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TEY FKL+L++++YD V+ M+RN++L GQ++IAYLQQKG+PEVALHFVKDE+TRF L
Sbjct: 591 IDPTEYKFKLALIQRKYDEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDEKTRFGL 650
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+KD W RLG AL QGN +VE YQRTKNF++LSFLYLITG
Sbjct: 651 ALECGNIEIALEAAKALDDKDCWDRLGQSALLQGNHQVVEMCYQRTKNFDKLSFLYLITG 710
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM KIAE++ DV Q+ AL LGDVKERV IL++ G L LAY+TA+ HG ++
Sbjct: 711 NLEKLKKMNKIAEIRKDVSAQYQGALLLGDVKERVNILKNCGQLSLAYLTAATHGFDELT 770
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGL 822
E L + S+PE LL PP P+ +WPLL V KG FEG +
Sbjct: 771 ESLGESITSQGNSLPEVNPNAQLLQPPVPIQQLETNWPLLSVSKGFFEGAM 821
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 2696 (954.1 bits), Expect = 1.5e-280, P = 1.5e-280
Identities = 501/762 (65%), Positives = 610/762 (80%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L+Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQV-P-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF+RLSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAG 755
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL + G
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCG 753
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 2696 (954.1 bits), Expect = 1.5e-280, P = 1.5e-280
Identities = 501/762 (65%), Positives = 610/762 (80%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L+Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
GS + P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 S-GS----KFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + + P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQV-P-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF+RLSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAG 755
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL + G
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCG 753
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 2467 (873.5 bits), Expect = 2.8e-256, P = 2.8e-256
Identities = 465/832 (55%), Positives = 596/832 (71%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L KFE+KS RVKG+SFH RPW+L SLHSGVIQLWDYRM L+++FDEHDGPVRG+ FH
Sbjct: 3 LLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFH 62
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
QP+FVSGGDDYKIKVWNYK RC+FTLLGHLDYIRT FHH+YPWI+SASDDQT+RIW
Sbjct: 63 HDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIW 122
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSR I++LTGHNHYVMCA FHP EDLV SASLDQTVRVWDI LRKK + R
Sbjct: 123 NWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQMPGGGAPSR 182
Query: 181 -LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
+LFG DAVVK+VLEGHDRGVNW AFH T P++VSG+DDRQVK+WR NETKAW
Sbjct: 183 PTGGQQAELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAW 242
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
E+D+ RGH NNVS V+FH D+I+SNSEDKSIRVWD+ KRT + FR E++RFW+LA+H
Sbjct: 243 ELDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAH 302
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRP 359
P +N+ AAGHD+GM+VFK++RERPA+ VS + +FY K + +R + +T KD + +R P
Sbjct: 303 PSLNMFAAGHDNGMVVFKIQRERPAYCVSDNLVFYVKGQQIRKLDLTTNKDVALCKLRYP 362
Query: 360 GSTSLNQSPRTLSYSPTENAVLICS---DVDGGSYELYVIPKDSIGRGDSVQDAKKGLGG 416
Q +LS++P E L+ S + D ++ELY + +S G ++ K G
Sbjct: 363 --QPFMQPYYSLSFNPAEGTFLLTSRTHNKDLCAFELYKVASNSDGTTEAA--CVKSTGI 418
Query: 417 SAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVI 476
+A+++ARNRFAVLDK+ N + A D IFYAGTG LL R +D + +
Sbjct: 419 NALWVARNRFAVLDKAQNVSLRDLTNKELRKLENINTAVDDIFYAGTGMLLLRNDDGLQL 478
Query: 477 FDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGA 536
FD+QQ++V ++ V+YV+WS ME ALLSKH + + ++KL CT E+ RVKSGA
Sbjct: 479 FDVQQKIVTASVKVSKVRYVIWSKSMEFAALLSKHTLTLVNRKLEILCTQQESTRVKSGA 538
Query: 537 WDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDA 596
WDD+ VF+YTT NHIKY + +GD GI+RTLD+P+YI + GN ++CL+RD + ID
Sbjct: 539 WDDDSVFLYTTSNHIKYAINSGDCGIVRTLDLPLYILAIRGNVLYCLNRDATPVEVPIDN 598
Query: 597 TEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALE 656
++Y FKL+L+ KR D V++M+R++ L GQ++I YL++KG+PE+ALHFVKDE+TRF LA+E
Sbjct: 599 SDYKFKLALINKRIDEVVNMVRSANLVGQSIIGYLEKKGYPEIALHFVKDEKTRFGLAIE 658
Query: 657 SGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMD 716
GN++IA+ +AK++DE W LG AL QGN IVE +YQRTKNFE+LSFLY +TGN D
Sbjct: 659 CGNLEIALEAAKKLDEPAVWEALGETALLQGNHQIVEMSYQRTKNFEKLSFLYFVTGNTD 718
Query: 717 KLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERL 776
KL KM+KIA+ +ND G F ALY GDV+ERVK+L + G LAY+ A+ HG AE L
Sbjct: 719 KLVKMMKIAQARNDAHGHFQTALYTGDVEERVKVLRNCGQTSLAYLAAATHGYSAEAEEL 778
Query: 777 AAELGDNV-PSVPEGKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIG 826
AEL P P LL+PP PV +WPLL +G F+ L +G
Sbjct: 779 KAELESRQQPIPPVDPNARLLVPPPPVARLEENWPLLASARGTFDAQLLGLG 830
Score = 232 (86.7 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 43/122 (35%), Positives = 70/122 (57%)
Query: 42 TLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+L+ +F+ V+G+ FH ++P ++ I++W+Y+M L H +R + F
Sbjct: 2 SLLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICF 61
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
HH+ P VS DD I++WN++ + CI L GH Y+ FH K ++SAS DQTVR+
Sbjct: 62 HHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRI 121
Query: 162 WD 163
W+
Sbjct: 122 WN 123
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 2452 (868.2 bits), Expect = 1.1e-254, P = 1.1e-254
Identities = 466/835 (55%), Positives = 603/835 (72%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFE+KS+R KG++FH KRPWIL SLHS IQLWDYRMGTLIDRF+EHDGPVRG+ FH
Sbjct: 1 MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYKIKVWNY+ RCLFTL GHLDY+RTV FH E PWI+SASDDQTIRIW
Sbjct: 61 PTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-----TVSPA 175
NWQ+R+ I +TGHNHYVMCA FHP EDL+ SASLDQ+VR+WDI LRKK T+S
Sbjct: 121 NWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHSAPTTMSFE 180
Query: 176 DDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
D + R + D+FG DAVVK+VLEGHDRGVNW AFHP+LPLIVS DDR +KLWRM++
Sbjct: 181 DQMARANNAQADMFGNTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSD 240
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI 295
TKAWEVDT RGH N S +FH QD+I+S EDK+IR WD+ KRT VQ+F+R+ DRFW+
Sbjct: 241 TKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWV 300
Query: 296 LASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFY-AKDRFLRYYEFSTQKDT-QV 353
+A+HPE+NL AAGHD+G++VFKLERERPA AV + LFY K++ ++ ++F+ ++ +
Sbjct: 301 IAAHPEINLFAAGHDTGVMVFKLERERPASAVYQNQLFYITKEKHVKSFDFAKNVESPSM 360
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+ +R+ GS + PRTLSY+P E AVL+ S DGG YEL +P+D+ G + D K+G
Sbjct: 361 LSLRKLGSPWV--PPRTLSYNPAERAVLVTSPADGGVYELINLPRDATGAIEPT-DVKRG 417
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADA-IFYAGTGNLLCRAED 472
SA+F+ARNRFAV ++ NQ SI P A I++ GTG+LL
Sbjct: 418 QASSAVFVARNRFAVFSQA-NQQVDIKDLSNSTTKSIKPPAGTTDIYFGGTGSLLFITPT 476
Query: 473 RVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRV 532
VV+FD+QQ+ L +L VKYVVWSND ALLSKH + I +K L +LHETIR+
Sbjct: 477 SVVLFDIQQKKQLAELAVSGVKYVVWSNDGLYAALLSKHNVTIVTKTLEQVSSLHETIRI 536
Query: 533 KSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAI 592
KS AWDD GV +Y+TLNH+KY L NGD+GIIRTLD +Y+ KV G +++CLDR+ K R +
Sbjct: 537 KSAAWDDAGVLLYSTLNHVKYSLLNGDNGIIRTLDQTVYLVKVKGRSVYCLDRNAKPRTL 596
Query: 593 VIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFN 652
ID TEY FKL+L+++ YD ++ +I+ S L GQ++I+YLQ+KG+PE+AL FV+D +TRF
Sbjct: 597 EIDPTEYRFKLALVKRNYDEMLQIIKTSSLVGQSIISYLQKKGYPEIALQFVQDPQTRFE 656
Query: 653 LALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLIT 712
LALE GN+ +A+ A+E+D + W RLG+EAL GN IVE AYQ+ +NF++LSFLYL
Sbjct: 657 LALECGNLDVAIEMARELDRPNLWNRLGIEALAHGNHQIVEMAYQKQRNFDKLSFLYLSI 716
Query: 713 GNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDV 772
G+ +KLS+M KIAE + D +F NA+Y GDV++R+++ + PLAY+TA HGL +
Sbjct: 717 GDQEKLSRMAKIAEHRGDFTSRFQNAIYRGDVEDRIQMFKEVDLYPLAYLTAKAHGLTEE 776
Query: 773 AERLAAELG---DNVPSVPEGKAPSLLMPPSPVVCS--GDWPLLRVMKGIFEGGL 822
AE + +G D V S+P +AP + P P+V + WP+ FE L
Sbjct: 777 AESILEVVGLSEDQV-SLPTIEAPPQI--PQPIVATYKASWPVKAAAHSSFEKAL 828
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 2425 (858.7 bits), Expect = 7.9e-252, P = 7.9e-252
Identities = 474/829 (57%), Positives = 606/829 (73%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
ML KFETK++RVKGLSFH RPWILASLHSG I L+DYR+ TL+++FDEH+GPVRG++FH
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYKIKVWNYK RCLFTL GH DYIR+V+FH E PWIVS+SDD IRIW
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK--TVSP--AD 176
NWQSRTCI+ L GHNHYVM A FHPK+DLVVSASLDQT+R+WDI L+KK TV P +
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYREN 180
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
D +RL +LFG D V+ LEGHDRGVNWA+FHPT P IVS +DD QVKLWRMN+
Sbjct: 181 DPMRLQD---ELFG-TDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDP 236
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
VDT RGH NNVSC +FH +QD+I+SNSEDK+IRVWD+ K++ V RR+HDRFW L
Sbjct: 237 I---VDTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTL 293
Query: 297 ASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQVIP 355
ASHP NL AAGHDSGMIVFKLERERP F +GDS +F+ K + ++F + +
Sbjct: 294 ASHPNQNLFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQAGRTVSLFH 353
Query: 356 IRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIP-KDSIGRGDSVQDAKKGL 414
I + S N +T+SY+ TE A+L+ SD +GGSY LY IP KDS + + KKG
Sbjct: 354 ISKLPS---NNGTQTMSYNQTERAILVSSDAEGGSYHLYKIPPKDS-----NTVNTKKGT 405
Query: 415 GGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGT-GNLLCRAEDR 473
G +AIF+ R+RFAVLDK +N I P D I+ +G+ G +L ++ED+
Sbjct: 406 GVAAIFVGRDRFAVLDKGNNVVIRDLENEEIKRCQI-PFTIDWIYPSGSPGTILIQSEDK 464
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ +L ++Q V+YV+WS D VA L++ I++A+KKL C +HET+ K
Sbjct: 465 IHMFDIQQKKMLCEIQVHGVRYVIWSKDRNYVAFLTRDFIVLANKKLEQICMIHETVLPK 524
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SG WDDNGVFIY+T NH+KY L NGD+G IRTL+ IYIT V N +F +DR+ KNR I
Sbjct: 525 SGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNRIIE 584
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TEY+ KLSLL++ Y+ VM+++R ++L G+A+IAYLQ+KG+P+V +HFVKD+RTRFNL
Sbjct: 585 IDTTEYVLKLSLLQQNYNQVMTILRENRLVGKAIIAYLQKKGYPDV-VHFVKDDRTRFNL 643
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
AL++GNI IA++SAK +D+KD W RLGVEAL+QGN +VE AY RT F+RLSFLYL+ G
Sbjct: 644 ALDAGNIDIALSSAKILDDKDCWNRLGVEALKQGNYQVVEMAYSRTSEFDRLSFLYLLVG 703
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N+ L KM I+ +D+M +FH +LYLGDV+ER+KIL+ AG LAYITAS+HGL + A
Sbjct: 704 NLSTLKKM--ISYESSDIMSRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLTEKA 761
Query: 774 ERLAAEL-GDNVPSVPE-GKAPSLLMPPSPVVCSGD---WPLLRVMKGI 817
E + + D +P+ K LL+PPSP+ C+ + WPLL K +
Sbjct: 762 ESIGNLITSDGKSQLPQLPKQSYLLVPPSPINCNPNELNWPLLTTTKSV 810
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 2314 (819.6 bits), Expect = 4.6e-240, P = 4.6e-240
Identities = 440/831 (52%), Positives = 571/831 (68%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFE++S+R KG++FH +PWIL SLH+G IQLWDYRMGTL+DRFD HDGPVRG+ FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYK+ VWNYK + LF+L GH+DY+R FHHEYPWI+S SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL- 179
NWQSR CI++LTGH+HYVMCA+FHP EDL+VSASLDQTVRVWDI LR K +P L
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLE 182
Query: 180 -RLSQ----MNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+L+Q ++ DLFG DA+VK+VLEGHDRGVNW AFHPTLPLI+S DDR VKLWRM
Sbjct: 183 DQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMT 242
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
+KAWEVDT RGH NNVSC +FH Q++I+S SEDK+IRVWD+ +RT VQTFRR++DRFW
Sbjct: 243 ASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFW 302
Query: 295 ILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYA-KDRFLRYYEFSTQKDTQV 353
+ HP++NL AA HDSG++VFKLERERPA A++ ++L Y K++ + Y+ + T V
Sbjct: 303 FITVHPKLNLFAAAHDSGVMVFKLERERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTV 362
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
++ GS L PR+LSY+P E L+ S D G YEL + S ++D KG
Sbjct: 363 ASVKHLGSAWL--PPRSLSYNPAEKVALLTSSADNGVYELVNVSSRS--NSLPLKDNIKG 418
Query: 414 LGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDR 473
G AIF+ARNRFAV +S LP IF+AG G++L +
Sbjct: 419 PGDDAIFVARNRFAVFSRSDQTIEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQ 478
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
V +FDLQQ+ ++ VKYVVWSND ALL KH + I K L ++HETIR+K
Sbjct: 479 VHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIK 538
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
S W +N V +Y TL+H+KY L +GD+G+I+TL+ +Y+ K GN +F L+R + +
Sbjct: 539 SAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFE 598
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TEY+FKL+LLRK Y+ V+ +I+NS L GQA+IAYLQ+KG+PE+AL FV+D TRF L
Sbjct: 599 IDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPSTRFEL 658
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GN++ A+ A+ ID + W RL +A+ GN I E +Q+ + FE+LSFLYLITG
Sbjct: 659 ALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITG 718
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N +KL KM IAE +ND + F N+LYL +V+ R+ ILE AG P+AY+TA +GL++ A
Sbjct: 719 NAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKA 778
Query: 774 ERLAAELGDNVPSVPEGKAPSLLMPPSPV--VCSGDWPLLRVMKGIFEGGL 822
+++ + + S P PV + +WPLL FE L
Sbjct: 779 QQILSHCNKTEEEIKLPSLGSAFTTPVPVNETYTHNWPLLDTSHSTFEKSL 829
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 2170 (768.9 bits), Expect = 8.3e-225, P = 8.3e-225
Identities = 433/836 (51%), Positives = 569/836 (68%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFE+KS+R KG++FH KRPW L SLHS IQLWDYRMGTLIDRF++H GPVR V FH
Sbjct: 3 MLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFH 62
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDY IKVW+ +C+FTL GHLDYIR V FHH+ PWI+S SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIW 122
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA----- 175
NWQ+R I+ LTGHNHYVM A FHP EDL+VSASLDQTVRVWDI LRKK +P
Sbjct: 123 NWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAPTSSVRA 182
Query: 176 -DDILRLSQM-NTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+D L+ Q+ D+FG ++AVVKYVLEGHD+GVN+A+FHPTLPLIVS DDR VKLWRM
Sbjct: 183 FEDQLQRQQLPQQDIFGNINAVVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRM 242
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
++TKAWEVDT RGH NV +FH QD+I+S S+DK+IRVWD+ KR V+ FRREHDRF
Sbjct: 243 SDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRF 302
Query: 294 WILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAK-DRFLRYYEFSTQKDT- 351
W++ASHP ++L AA HDSG++VFKLERERPA + + L+Y ++ ++ ++ + Q+++
Sbjct: 303 WLIASHPTISLFAACHDSGIMVFKLERERPAHTIFQNKLYYVNGEKQIQTFDINKQENSL 362
Query: 352 QVIPIRRPGSTSLNQSPRTLSYSPTENAVLIC-SDVDGGSYELYVIPKDSIGRGDSVQDA 410
++ +++ G T RTLSY+ ++N+VL+ + D G+Y L +PK G + D
Sbjct: 363 PMLSLKKIGKTW--SFMRTLSYNQSDNSVLVVHGEGDNGNYALITLPKHVTGAIEPT-DI 419
Query: 411 KKGLGGSAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRA 470
++G A FI+RNRF KS+ L + + G +L
Sbjct: 420 RQGEANFAAFISRNRFVTFVKSTKTLQVKDLNNNITKTVQLDSSIVDVLPGSPGRILLVK 479
Query: 471 EDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETI 530
V+ +D+QQR L ++ VKYV WS++ + +ALLSKH I IA K L ++HETI
Sbjct: 480 AHSVINYDVQQRKELAEISVNNVKYVSWSSNGQYLALLSKHTITIADKDLKLITSMHETI 539
Query: 531 RVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNR 590
R+KS AWDD GV +Y+TLNHIKY L NGD+GII+TL+ +YITKV GN I+CL+R G+
Sbjct: 540 RIKSAAWDDTGVLLYSTLNHIKYTLLNGDNGIIKTLENTLYITKVQGNLIYCLNRQGQVE 599
Query: 591 AIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTR 650
I ID TEY FK +L+ K + V+ +I+NS L GQ +I YLQ+KGFPEVALHFV+D TR
Sbjct: 600 TITIDPTEYRFKRALVNKNFGEVLRLIKNSTLVGQNIIGYLQKKGFPEVALHFVQDPETR 659
Query: 651 FNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYL 710
F LALE N+Q+A+ AK ++ W +LG EAL QGN IVEY YQ+ +F++LSFLYL
Sbjct: 660 FELALECSNLQVALEQAKILNNNQIWEKLGEEALLQGNIEIVEYIYQQLHHFDKLSFLYL 719
Query: 711 ITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQ 770
G+ ++L KM IA+ ++D N LY D+K+R ++ G LPLAY A +GL
Sbjct: 720 YKGDDERLDKMSTIAQHRDDTSSLVQNTLYNNDIKKRCQVYIQNGMLPLAYTLAKSNGLN 779
Query: 771 DVAERLAAELGDNVPSVPEGKAPSL--LMP-PSPV-VCSGDWPLLRVMKGIFEGGL 822
++AE++ E N+ S + + P L ++P P P+ G+WPL FE L
Sbjct: 780 ELAEQILQEA--NI-SEKDVELPELGDVVPLPKPIGEPVGNWPLKDSELSYFETAL 832
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 2058 (729.5 bits), Expect = 6.1e-213, P = 6.1e-213
Identities = 399/827 (48%), Positives = 545/827 (65%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFE+KS R KG++FH RPW+L +L S IQLWDYRMGTL+ RF++H+GPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QP+FVS GDDY IKVW+ ++CL+TL GHLDY+RTV FH E PWI+SASDDQTIRIW
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIW 122
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL- 179
NWQ+R I+ LTGHNH+VMCA FHP +DL+VSASLD+T+R+WDI LRK+ +P
Sbjct: 123 NWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFE 182
Query: 180 -RLSQMNTDLFGGV-DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
++S L G + D VVK++LEGH RGVNWA+FHPTLPLIVSG+DDRQVKLWRM+ TK
Sbjct: 183 EQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATK 242
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNV V+FH Q++I+S EDK++RVWD+ KRT V+ F+RE+DRFW++A
Sbjct: 243 AWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIA 302
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL A HDSG++VFKL+RERP + + LF+ + F+ QK +P
Sbjct: 303 AHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFFVNAE-KQIQSFNFQKRVASLPYA 361
Query: 358 R-PGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGG 416
G + R++SY+P++++VL+ + G + L ++PK +G + + G
Sbjct: 362 SLKGIGQPWDAFRSISYNPSQHSVLV--NEANGKFALVILPKQPVGAVEPTS-VTQDTGN 418
Query: 417 SAIFIARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVI 476
A F+ RNRF V +K++ + I AG G++L V++
Sbjct: 419 FATFVGRNRFVVYNKNTESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVIL 478
Query: 477 FDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGA 536
+D+QQ + L VKYV WS D + VAL+SKH I +A+KKL ++HETIR+KS A
Sbjct: 479 YDVQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAA 538
Query: 537 WDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDA 596
WD+ GV IY+TLNHI+Y L NGD GII+TL+ +YITKV G ++CL+R+G+ + ID
Sbjct: 539 WDETGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDP 598
Query: 597 TEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALE 656
TEY FK +L+ K + V+ +I++S L GQ +I+YLQ+ G+PE+AL FV+D RF+LALE
Sbjct: 599 TEYRFKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRFDLALE 658
Query: 657 SGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMD 716
GN+ +A+ AK++++ W RL EAL QGNA + E YQ +F++LSFLYL+TG+++
Sbjct: 659 YGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVN 718
Query: 717 KLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERL 776
KLSKM IA+ + D N Y KER I G LPLAY A +G + A
Sbjct: 719 KLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEAAASAF 778
Query: 777 A--AELGDNVPSVPEGKAPSLLMPPSPVVCSG--DWPLLRVMKGIFE 819
AE+ + ++P+ S + PV+ WPL FE
Sbjct: 779 LEQAEVDEQDVTLPDQMDASNFVQ-RPVISKPLEKWPLKEAELSYFE 824
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 441 (160.3 bits), Expect = 8.8e-69, Sum P(2) = 8.8e-69
Identities = 163/643 (25%), Positives = 292/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSCV
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCV 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F+ A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFVWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A+ I+ G G LL R+ + + +D + ++
Sbjct: 403 YAIRESNSVVKIFKNFKEKKSFKPDFGAEGIY--G-GFLLGVRSVNGLAFYDWENTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K+ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVSSAQETHEGVTEDGIEDAFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIVSYSLLVSVLEY--QTAVMRRDFGMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 632 QQALAVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN + ++K+ + AE KN+V F + G + +++L G
Sbjct: 692 HAQDYGGLLLLATASGNANMVNKLAEGAEKDGKNNVA--FMSYFLQGKLDSCLELLIKTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +++ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRESLSKVNQKAAESLADP 791
Score = 339 (124.4 bits), Expect = 8.8e-69, Sum P(2) = 8.8e-69
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 261 (96.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 53/168 (31%), Positives = 91/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V C SFHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 5.5e-53, Sum P(2) = 5.5e-53
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 164 (62.8 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + V FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 120 (47.3 bits), Expect = 9.8e-46, Sum P(2) = 9.8e-46
Identities = 42/192 (21%), Positives = 90/192 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V A F +++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGH 203
VV+ + D +RV++ L + + A D +R ++ T F D ++K L
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D+ W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 129 DK--KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 439 (159.6 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 164/643 (25%), Positives = 291/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D ++
Sbjct: 403 YAIRESNSIVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWDNTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIISYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 632 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN + ++K+ + AE KN+V F + G V +++L G
Sbjct: 692 HAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVA--FMSYFLQGKVDACLELLIRTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
Score = 339 (124.4 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 265 (98.3 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 120 (47.3 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 42/192 (21%), Positives = 90/192 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V A F +++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGH 203
VV+ + D +RV++ L + + A D +R ++ T F D ++K L
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D+ W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 129 DK--KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 437 (158.9 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 163/643 (25%), Positives = 291/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D + ++
Sbjct: 403 YAIRESNSVVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWENTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 632 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN ++K+ + AE KN+V F + G + +++L G
Sbjct: 692 HAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQGKLDACLELLIRTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
Score = 339 (124.4 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 265 (98.3 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 1.5e-52, Sum P(2) = 1.5e-52
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 120 (47.3 bits), Expect = 2.7e-45, Sum P(2) = 2.7e-45
Identities = 42/192 (21%), Positives = 90/192 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V A F +++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGH 203
VV+ + D +RV++ L + + A D +R ++ T F D ++K L
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D+ W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 129 DK--KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 436 (158.5 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 163/643 (25%), Positives = 291/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ DT++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D + ++
Sbjct: 403 YAIRESNSIVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWENTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + + +
Sbjct: 632 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN ++K+ + AE KN+V F + G + +++L G
Sbjct: 692 HAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQGKLDACLELLIRTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
Score = 339 (124.4 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 265 (98.3 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00081
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 120 (47.3 bits), Expect = 3.4e-45, Sum P(2) = 3.4e-45
Identities = 42/192 (21%), Positives = 90/192 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V A F +++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGH 203
VV+ + D +RV++ L + + A D +R ++ T F D ++K L
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D+ W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 129 DK--KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 435 (158.2 bits), Expect = 4.0e-68, Sum P(2) = 4.0e-68
Identities = 163/643 (25%), Positives = 290/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D ++
Sbjct: 403 YAIRESNSVVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWDNTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 632 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN ++K+ + AE KN+V F + G + +++L G
Sbjct: 692 HAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQGKLDACLELLIRTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
Score = 339 (124.4 bits), Expect = 4.0e-68, Sum P(2) = 4.0e-68
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 265 (98.3 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 120 (47.3 bits), Expect = 4.5e-45, Sum P(2) = 4.5e-45
Identities = 42/192 (21%), Positives = 90/192 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V A F +++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGH 203
VV+ + D +RV++ L + + A D +R ++ T F D ++K L
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D+ W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 129 DK--KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 435 (158.2 bits), Expect = 4.0e-68, Sum P(2) = 4.0e-68
Identities = 163/643 (25%), Positives = 290/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D ++
Sbjct: 403 YAIRESNSVVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWDNTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 632 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN ++K+ + AE KN+V F + G + +++L G
Sbjct: 692 HAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQGKLDACLELLIRTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
Score = 339 (124.4 bits), Expect = 4.0e-68, Sum P(2) = 4.0e-68
Identities = 63/165 (38%), Positives = 99/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 265 (98.3 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 120 (47.3 bits), Expect = 4.5e-45, Sum P(2) = 4.5e-45
Identities = 42/192 (21%), Positives = 90/192 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V A F +++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGH 203
VV+ + D +RV++ L + + A D +R ++ T F D ++K L
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D+ W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 129 DK--KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 429 (156.1 bits), Expect = 3.9e-67, Sum P(2) = 3.9e-67
Identities = 162/643 (25%), Positives = 290/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V T GH NVSC
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTPEGHAQNVSCA 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 236 TFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 295
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ DT++ +P+ S P
Sbjct: 296 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 402
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D + ++
Sbjct: 403 YAIRESNSVVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWENTELIR 459
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 460 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLG 518
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 519 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 576
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 577 DKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 631
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + + +
Sbjct: 632 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLH 691
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN ++K+ + AE KN+V F + G + +++L G
Sbjct: 692 HAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQGKLDACLELLIRTG 749
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 750 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
Score = 336 (123.3 bits), Expect = 3.9e-67, Sum P(2) = 3.9e-67
Identities = 63/165 (38%), Positives = 98/165 (59%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 255 (94.8 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 52/168 (30%), Positives = 91/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ GH V CA+FHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 152 (58.6 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ T GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
+
Sbjct: 278 A 278
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00081
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 114
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 115 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 175 SSPNFTLEG 183
Score = 119 (46.9 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 41/187 (21%), Positives = 89/187 (47%)
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
D +++V H PW++++ + ++ +WN +++T + + V A F +++ VV+
Sbjct: 16 DRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTG 75
Query: 154 SLDQTVRVWDIGALRKKTVSPA-DDILRLSQMN-TDLF---GGVDAVVKYVLEGHDRGVN 208
+ D +RV++ L + + A D +R ++ T F D ++K L D+
Sbjct: 76 ADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIK--LWDWDK--K 131
Query: 209 WAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMNNVSCV 254
W+ F H + ++++ D+ Q ++ T K W++ TL GH V+C+
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 255 MFHAKQD 261
+++ D
Sbjct: 192 DYYSGGD 198
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 418 (152.2 bits), Expect = 3.1e-66, Sum P(2) = 3.1e-66
Identities = 162/646 (25%), Positives = 293/646 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGHD+GVN ++ P ++SGADDR VK+W N+T V TL GH NVSCV
Sbjct: 179 FTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCV 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W ++ N +A G+D G I
Sbjct: 236 NFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSI 295
Query: 315 VFKLERERPAFAV-SGDSLFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 296 IIKLGREEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 355
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARN--R 425
+T+ ++P V++C D G Y +Y ++ K G + F+ A +
Sbjct: 356 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFVWAHDSSE 402
Query: 426 FAVLDKSSNQXXXXXXXXXXXXXSILP-IAADAIFYAGTGNLL-CRAEDRVVIFDLQQRL 483
+A+ + SS S P A+ I+ G G LL R+ + + +D +
Sbjct: 403 YAIRESSS---VVKIFKNFKEKKSFKPDFGAEGIY--G-GFLLGVRSVNGLAFYDWENTE 456
Query: 484 VLGDLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR--------- 531
++ ++ K++ WS+ E V + ++ + I S+K+ +E +
Sbjct: 457 LIRRIEIQ-PKHIFWSDSGELVCIATEESFFILRYLSEKVAASQENNEGVTEDGIEDAFE 515
Query: 532 --------VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTI 580
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ + +
Sbjct: 516 VLGEIQEVVKTGLWVGD-CFIYTSSVNRLNYFV-GGEIVTIAHLDRTMYLLGYIPKDDRL 573
Query: 581 FCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQK 634
+ D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++
Sbjct: 574 YLGDKELNIVSYSLLVSVLEY--QTAVMRRDFGMADKVLPTIPKEQ---RTRVAHFLEKQ 628
Query: 635 GFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEY 694
GF + AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 629 GFKQQALAVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQE 688
Query: 695 AYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILE 752
+++ L L +GN ++K+ + AE KN+V F G + +++L
Sbjct: 689 CLHHAQDYGGLLLLATASGNASMVAKLAEGAERDGKNNVA--FMTYFLQGKLDNCLELLI 746
Query: 753 SAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +++ V + A SL P
Sbjct: 747 KTNRLPEAAFLARTY-LPSQVSRVVKLWRESLSKVNQKAAESLADP 791
Score = 340 (124.7 bits), Expect = 3.1e-66, Sum P(2) = 3.1e-66
Identities = 62/165 (37%), Positives = 100/165 (60%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
++G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W+
Sbjct: 70 NWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWE 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
+ +C V GH HYVM +PK++ SASLD+T++VW +G+
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 174
Score = 258 (95.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/168 (30%), Positives = 91/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 95 FEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V C +FHP+ ++++ S D TVR+W R
Sbjct: 215 DYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 189 (71.6 bits), Expect = 2.4e-50, Sum P(2) = 2.4e-50
Identities = 42/167 (25%), Positives = 81/167 (48%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 49 LVKTFEVCDLPVRASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 109 PTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH+ V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 171 (65.3 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + HD V + ++ +P +SG DD +K+W+Y+
Sbjct: 161 ASLDR-TIKVW--QLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + V FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 218 NKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 142 S 142
S
Sbjct: 278 S 278
Score = 112 (44.5 bits), Expect = 3.0e-42, Sum P(2) = 3.0e-42
Identities = 38/192 (19%), Positives = 87/192 (45%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D +++V H PW++++ + ++ +WN +++T + + V + F +++
Sbjct: 11 LTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMNTD----LFGGVDAVVKYVLEGH 203
V++ + D +RV++ L + + A D +R ++ L D ++K
Sbjct: 71 WVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKL----W 126
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
D W+ F H + ++++ D+ Q ++ T K W++ TL GH
Sbjct: 127 DWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDK 186
Query: 250 NVSCVMFHAKQD 261
V+C+ +++ D
Sbjct: 187 GVNCIDYYSGGD 198
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 381 (139.2 bits), Expect = 8.3e-65, Sum P(2) = 8.3e-65
Identities = 152/639 (23%), Positives = 283/639 (44%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+ L+ H +GVN + P +++G+DD K+W +TK+ V TL GH +NVS V
Sbjct: 394 FTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVS 451
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIV 315
FH + II++ SED ++R+W T T +R W + + G+D G I+
Sbjct: 452 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIM 511
Query: 316 FKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQ-----KDTQVIPIRRPGSTSLNQSPR 369
KL RE P ++ + +AK + + D + +P+ + + P+
Sbjct: 512 VKLGREIPVASMDNSGKIIWAKHNEIHTVNIKSVGADEVTDGERLPLAVKELGTCDLYPQ 571
Query: 370 TLSYSPTENAVLICSDVDGGSYELYV-IPKDSIGRGDSVQDAKKGLGGSAIFIARNRFAV 428
+L ++P V++C D G Y +Y + + G +++ G A+ + + +
Sbjct: 572 SLKHNPNGRFVVVCGD---GEYIIYTALAWRNRSFGSALEFVWSSDGEHAVRESSTKIKI 628
Query: 429 LDKSSNQXXXXXXXXXXXXXSILP-IAADAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGD 487
K+ + ++ P +A+ IF GT +C + D + +D + ++
Sbjct: 629 FSKNFQEKK-----------TVRPTFSAEHIF-GGTLLTMC-SSDFICFYDWAECRLIRR 675
Query: 488 LQTPFVKYVVW--SNDMESVA------LLSKHAIIIAS-----KKLVHQCT------LHE 528
+ VK + W S D+ ++A +L + I++S K++ + L+E
Sbjct: 676 IDVT-VKNLYWADSGDLVAIASDTSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNE 734
Query: 529 TI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLDVPIYITKVSGNT--IFCLD 584
T RV++G W + FIYT + + YC+ G+ + LD P+Y+ N ++ +D
Sbjct: 735 TNERVRTGLWVGD-CFIYTNSSWRLNYCV-GGEVTTMYHLDRPMYLLGYLANQSRVYLID 792
Query: 585 RDGK--NRAIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIA-YLQQKGFPEVAL 641
++ +++ EY K ++R + ++ + +A +L+ +G E AL
Sbjct: 793 KEFNVIGYTLLLSLIEY--KTLVMRGDLEQANEVLPSIPKEHHNSVAHFLESRGMTEDAL 850
Query: 642 HFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKN 701
D RF LA++ G + +A A E + W +LG A+ G + E + +
Sbjct: 851 EVATDPDYRFELAIQLGRLAVAKDIAVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMD 910
Query: 702 FERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAGHLPL 759
L LY G+ D + K+ +A+ KN+V F LG V++ + +L + +P
Sbjct: 911 LSGLLLLYSSLGDADGMMKLAALAKEQGKNNVA--FLCLFMLGQVEDCLHLLVESNRIPE 968
Query: 760 AYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
A + A + V+E +A D P+ A SL P
Sbjct: 969 AALMARSYLPSKVSEIVALWRNDLTKISPKA-AESLADP 1006
Score = 369 (135.0 bits), Expect = 8.3e-65, Sum P(2) = 8.3e-65
Identities = 76/204 (37%), Positives = 115/204 (56%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
KF +S RVK + H PWILASL+SG + +W+Y+ T++ FD + PVR F +
Sbjct: 225 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 284
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 285 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 344
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
C + GH+HYVM +F+PK+ + SASLD+T+++W++G+ A L
Sbjct: 345 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA----HL 400
Query: 182 SQMN-TDLFGGVDAVVKYVLEGHD 204
+N D F G D Y++ G D
Sbjct: 401 KGVNCVDYFTGGDK--PYLITGSD 422
Score = 272 (100.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 54/162 (33%), Positives = 91/162 (56%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHDGPVRGVHFH-KS 62
FE ++ ++ ++ H P++L+S +I+LWD+ G L + F+ H V V F+ K
Sbjct: 310 FEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKD 369
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IK+WN FTL HL + V + + P++++ SDD T ++W
Sbjct: 370 TNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVW 429
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
++Q+++C+ L GH H V SFHP+ ++++ S D TVR+W
Sbjct: 430 DYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 471
Score = 191 (72.3 bits), Expect = 4.5e-46, Sum P(2) = 4.5e-46
Identities = 49/167 (29%), Positives = 78/167 (46%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
M+ F+ V+ F +++ W++A I++++Y I F+ H +R V H
Sbjct: 264 MVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVH 323
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+ P +S DD IK+W++ K C GH Y+ V F+ + SAS D+TI+
Sbjct: 324 PTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 383
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
IWN S L H V C + D +++ S D T +VWD
Sbjct: 384 IWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 430
Score = 167 (63.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLH-SGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHK 61
FE S+ V ++F+ K AS I++W+ +G+ F D H V V +
Sbjct: 353 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHLKGVNCVDYFT 410
Query: 62 S--QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+P ++G DD+ KVW+Y+ C+ TL GH + V FH E P I++ S+D T+RI
Sbjct: 411 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRI 470
Query: 120 WN 121
W+
Sbjct: 471 WH 472
Score = 135 (52.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 139 MCASFHPKEDLVVSASLDQT-VRVWDIGALRKKTVSPADDI-LRLSQMNTDLFGGVDAVV 196
+C + + +V S + + VR A ++ V+ ADD+ +R+ NT +D +
Sbjct: 254 LCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNT-----MDKIK 308
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL-RGHMNNVSCVM 255
V E H + A HPTLP ++S +DD +KLW K W + GH + V V
Sbjct: 309 --VFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE--KGWLCTQIFEGHSHYVMQVT 364
Query: 256 FHAKQ-DIIVSNSEDKSIRVWDV 277
F+ K + S S D++I++W++
Sbjct: 365 FNPKDTNTFASASLDRTIKIWNL 387
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 416 (151.5 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 157/617 (25%), Positives = 278/617 (45%)
Query: 195 VVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNV 251
V + LEGH++GVN ++ P I+SGADD VK+W N+T V TL GH NV
Sbjct: 176 VPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTC---VQTLDGHAQNV 232
Query: 252 SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDS 311
S V FH + +I++ SED ++R+W T +R W + + N +A G+D
Sbjct: 233 SSVCFHPELPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDE 292
Query: 312 GMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFST--QKDTQVIPI--RRPGSTS-LN 365
G + KL RE PA ++ S + +AK ++ T ++++ I R P S L
Sbjct: 293 GSVTLKLGREEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQDGERLPLSVKDLG 352
Query: 366 QS---PRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF-I 421
S P+TL++S V+ C D G Y +Y ++++ G G ++ +
Sbjct: 353 SSEIYPQTLAHSSNGRFVVACGD---GEYIVYTAM--------ALRNKDFGQGLEFVWAV 401
Query: 422 ARNRFAVLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQQ 481
N FAV + ++N S + + + I +G L R+ + + FD +
Sbjct: 402 DPNMFAVRESATNVKIKKNFKDHKSIRSDMVL--EGI--SGGPLLALRSNNSLCFFDWES 457
Query: 482 RLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIA--SKKLVHQCT---------LHETI 530
+++ ++ K + WS++ E VA+ + + S + V T E I
Sbjct: 458 AVLVRRIEITS-KSIYWSDNGEMVAICGDDSFYVLKYSAEAVANATEVTEDGIEDAFEVI 516
Query: 531 -----RVKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYIT--KVSGNTIFC 582
VK+G W + FI+TT LN I Y + G+ I +D P+Y+ + ++
Sbjct: 517 GEQAEAVKTGFWIGD-CFIFTTALNRINYYV-GGEIVTIAHVDRPLYLLGYMAKESRVYA 574
Query: 583 LDRDGK--NRAIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIA-YLQQKGFPEV 639
+D+D + +++ EY + +++R+ +D ++ + +A +L+++GF +
Sbjct: 575 VDKDLNVISYKLLLSVLEY--QTAVMRRDFDTADKVLTTIPKEQRTRVAHFLEKQGFKKQ 632
Query: 640 ALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRT 699
AL +D +F+L++ G+++ A A + D ++ W L A + + R
Sbjct: 633 ALAVSQDPDHKFDLSVALGDLKTAYDLALQSDSEEKWKALSNAATLKSELLLAGECLGRA 692
Query: 700 KNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPL 759
++F L L G+ L K+ + F ++L LGD+ + L S G LP
Sbjct: 693 RDFGGLMLLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDIDACLDKLISTGRLPE 752
Query: 760 AYITASVHGLQDVAERL 776
A A H V+ L
Sbjct: 753 AAFLARTHAPSRVSSIL 769
Score = 317 (116.6 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 58/165 (35%), Positives = 97/165 (58%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H W+LA+L++G + +W+Y TL+ F+ D PVR F +
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DY+R++ H P+++S+SDD +++W+W
Sbjct: 70 SWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWD 129
Query: 124 SRTCISV-LTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
++ + GH HYVM + +PK++ +ASLD+TV+VW G+
Sbjct: 130 NKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGS 174
Score = 264 (98.0 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 52/172 (30%), Positives = 92/172 (53%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-K 61
+FE S+ ++ L H P++++S ++++WD+ + F+ H V + + K
Sbjct: 94 QFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPK 153
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRI 119
F + D +KVW + + FTL GH + V ++H E P+I+S +DD ++I
Sbjct: 154 DNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKI 213
Query: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT 171
W++Q++TC+ L GH V FHP+ L+++ S D TVR+W R +T
Sbjct: 214 WDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLET 265
Score = 170 (64.9 bits), Expect = 5.6e-48, Sum P(2) = 5.6e-48
Identities = 36/167 (21%), Positives = 79/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F ++ W++ I++++Y + +F+ H +R + H
Sbjct: 49 LVKSFEVCDVPVRAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLF-TLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+ P +S DD +K+W++ + + GH Y+ + + + +AS D+T++
Sbjct: 109 PTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHP--KEDLVVSASLDQTVRVWD 163
+W + S L GH V C ++ ++ ++S + D V++WD
Sbjct: 169 VWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWD 215
Score = 127 (49.8 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 45/197 (22%), Positives = 87/197 (44%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
LL D ++ V H W+++A + + IWN++++T + + V A F P++
Sbjct: 11 LLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKS 70
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV 207
VV+ S D +RV++ L + A D LR ++ L + + +++ D
Sbjct: 71 WVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDN 130
Query: 208 NWA---AF----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMNNVSC 253
WA +F H + + ++ D+ +++T K W+ TL GH V+C
Sbjct: 131 KWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNC 190
Query: 254 V-MFHAKQDIIVSNSED 269
V +H + + + D
Sbjct: 191 VDYYHGGEKPYIISGAD 207
Score = 126 (49.4 bits), Expect = 0.00056, P = 0.00056
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 17 FHS-KRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKI 75
+H ++P+I++ ++++WDY+ T + D H V V FH PL ++G +D +
Sbjct: 194 YHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTV 253
Query: 76 KVWNYKMHRCLFTLLGHLDYIRTVQ 100
++W+ +R TL L+ + +Q
Sbjct: 254 RLWHANTYRLETTLNYGLERVWCIQ 278
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 439 (159.6 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 164/643 (25%), Positives = 291/643 (45%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 150 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 206
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 207 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 266
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 267 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 326
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 327 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 373
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D ++
Sbjct: 374 YAIRESNSIVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWDNTELIR 430
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 431 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLG 489
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 490 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 547
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 548 DKELNIISYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 602
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 603 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 662
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGDVKERVKILESAG 755
+++ L L +GN + ++K+ + AE KN+V F + G V +++L G
Sbjct: 663 HAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVA--FMSYFLQGKVDACLELLIRTG 720
Query: 756 HLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
LP A A + L R+ +N+ V + A SL P
Sbjct: 721 RLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 762
Score = 289 (106.8 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 55/145 (37%), Positives = 88/145 (60%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
+LASL++G + +W++ TL+ F+ D PVR F + V+G DD +I+V+NY
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR-TCISVLTGHNHYVMCAS 142
+ H DYIR + H P+I+++SDD I++W+W + +C V GH HYVM
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 143 FHPKED-LVVSASLDQTVRVWDIGA 166
+PK++ SASLD+T++VW +G+
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGS 145
Score = 265 (98.3 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 66 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 126 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 186 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 233
Score = 189 (71.6 bits), Expect = 7.2e-53, Sum P(2) = 7.2e-53
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 20 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 79
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 80 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 140 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 186
Score = 160 (61.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 132 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 188
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 189 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 248
Query: 142 S 142
+
Sbjct: 249 A 249
Score = 133 (51.9 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 139 MCASFHPKEDLVVSASL-DQTVRVWDIGALRKKTVSPADDI-LRLSQMNTDLFGGVDAVV 196
+C H + LV + + D VR A + V+ ADD+ +R+ NT ++ V
Sbjct: 10 VCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNT-----LERV- 63
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL-RGHMNNVSCVM 255
++ E H + A HPT P I++ +DD +KLW + K W + GH + V ++
Sbjct: 64 -HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD--KKWSCSQVFEGHTHYVMQIV 120
Query: 256 FHAKQDI-IVSNSEDKSIRVWDV 277
+ K + S S D++I+VW +
Sbjct: 121 INPKDNNQFASASLDRTIKVWQL 143
Score = 124 (48.7 bits), Expect = 0.00078, P = 0.00078
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 28 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 85
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 86 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 145
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 146 SSPNFTLEG 154
Score = 86 (35.3 bits), Expect = 4.8e-42, Sum P(2) = 4.8e-42
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 116 TIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA 175
++ +WN +++T + + V A F +++ VV+ + D +RV++ L + + A
Sbjct: 9 SVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA 68
Query: 176 -DDILRLSQMN-TDLF---GGVDAVVKYVLEGHDRGVNWAA---F----HPTLPLIVSGA 223
D +R ++ T F D ++K L D+ W+ F H + ++++
Sbjct: 69 HSDYIRCIAVHPTQPFILTSSDDMLIK--LWDWDK--KWSCSQVFEGHTHYVMQIVINPK 124
Query: 224 DDRQVKLWRMNET-KAWEVD------TLRGHMNNVSCVMFHAKQD 261
D+ Q ++ T K W++ TL GH V+C+ +++ D
Sbjct: 125 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGD 169
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 355 (130.0 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 64/168 (38%), Positives = 102/168 (60%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ +F T+S+RVKG+ FH PWIL +L++G I++W Y +L+ + PVR F
Sbjct: 5 VVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFI 64
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+ V G DD++I+V+NY + H DYIR++ H P+I+++SDD TI++W
Sbjct: 65 ARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLW 124
Query: 121 NWQSRTCIS-VLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA 166
NW + GH HYVM +F+PK+ + SA LD+TV++W +G+
Sbjct: 125 NWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGS 172
Score = 297 (109.6 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 95/324 (29%), Positives = 161/324 (49%)
Query: 198 YVLEGHD-RGVNWAAFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ L H+ +GVN+ ++P P +++ +DD+ +K+W +TK+ V TL GH++NVS
Sbjct: 177 FTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDY-QTKSC-VATLEGHLSNVSFA 234
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
+FH + IIVS SED +IR W+ ++ +R W + P+ N++AAG DSG +
Sbjct: 235 IFHPELPIIVSGSEDGTIRFWNSNTFKLEKSINYSLERAWCIGILPKSNVIAAGFDSGFV 294
Query: 315 VFKLERERPAFAV-SGDSLFYAKDR--FLRYYEFSTQ---KDTQVIPIRRPGSTSLNQSP 368
+ KL E P F++ S + L YAK+ + + S+ KD + + +++ S+ P
Sbjct: 295 IIKLGSEEPLFSMDSNNKLIYAKNSEVYQSVIKPSSSEGLKDGESLNLQQRDLGSIEIFP 354
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFIARNRFAV 428
+TL++SP +C D G Y +Y R S A + S A FA+
Sbjct: 355 QTLNHSPNGRYAAVCGD---GEYIVYTA---LAWRSKSYGSALDFVWNSHDSSAACPFAI 408
Query: 429 LDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQ-RLVLG 486
+ S L AD IF TG+LL ++E + +D + +LV
Sbjct: 409 --RESGVSVKIFKNFQEYLTLDLIYQADKIF---TGSLLGVKSEGCISFYDWEHGKLVRR 463
Query: 487 -DLQTPFVKYVVWSNDMESVALLS 509
DL + V+WS++ E +A+++
Sbjct: 464 VDLDDDIID-VIWSDNGELLAIVT 486
Score = 262 (97.3 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 52/178 (29%), Positives = 104/178 (58%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHDGPVRGVHFH 60
+T+FE + ++ ++ H +P+IL S I+LW++ +++ F+ H V V+F+
Sbjct: 90 VTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHNWKLEQTFEGHQHYVMSVNFN 149
Query: 61 KSQP-LFVSGGDDYKIKVWNYKMHRCLFTLLGH-LDYIRTVQFHHEY--PWIVSASDDQT 116
P F S D +K+W+ + FTL+ H + V ++ + P+++++SDD+T
Sbjct: 150 PKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSSDDKT 209
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVS 173
I++W++Q+++C++ L GH V A FHP+ ++VS S D T+R W+ + +K+++
Sbjct: 210 IKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWNSNTFKLEKSIN 267
Score = 176 (67.0 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 48/168 (28%), Positives = 76/168 (45%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLH-SGVIQLWDYRMGTLIDRFDEHDGPVRGVHF---- 59
FE + V ++F+ K P AS +++W +G+ F +GV++
Sbjct: 136 FEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWS--LGSSQPNFTLIAHEAKGVNYVDYY 193
Query: 60 -HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+P ++ DD IKVW+Y+ C+ TL GHL + FH E P IVS S+D TIR
Sbjct: 194 PQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIR 253
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
WN + + C PK + V++A D + +G+
Sbjct: 254 FWNSNTFKLEKSINYSLERAWCIGILPKSN-VIAAGFDSGFVIIKLGS 300
Score = 131 (51.2 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETKAWEVDTLRGH-MNNVSC 253
++ EGH V F+P P S DR VK+W + ++ TL H V+
Sbjct: 132 LEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQP--NFTLIAHEAKGVNY 189
Query: 254 VMFHAKQD--IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDS 311
V ++ + D ++++S+DK+I+VWD ++ V T HPE+ ++ +G +
Sbjct: 190 VDYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSED 249
Query: 312 GMIVF 316
G I F
Sbjct: 250 GTIRF 254
Score = 117 (46.2 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 149 LVVSASLDQT-VRVWDIGALRKKTVSPADDI-LRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
LV S + + VR A + V +DD +R+ NT + V ++ E H
Sbjct: 47 LVKSIQVTELPVRAGKFIARKNWIVVGSDDFQIRVYNYNTG-----EKVTQF--EAHPDY 99
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD-TLRGHMNNVSCVMFHAKQ-DIIV 264
+ A HP+ P I++ +DD +KLW + W+++ T GH + V V F+ K +
Sbjct: 100 IRSIAVHPSKPYILTSSDDLTIKLWNWDHN--WKLEQTFEGHQHYVMSVNFNPKDPNTFA 157
Query: 265 SNSEDKSIRVWDV 277
S D+++++W +
Sbjct: 158 SACLDRTVKIWSL 170
Score = 107 (42.7 bits), Expect = 5.5e-61, Sum P(3) = 5.5e-61
Identities = 38/176 (21%), Positives = 81/176 (46%)
Query: 603 LSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQI 662
L L + Y ++S ++L + + ++ G+ ++ +D ++F L+L +GN++
Sbjct: 659 LENLSEEYSQLISRFTKTEL--NQLSRFFEKLGYLALSFSLSQDFDSKFQLSLSTGNLKQ 716
Query: 663 A--VASAKE-------IDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
A + SA+E + W +LG AL + N + + ++ K++ L L T
Sbjct: 717 AYDLLSAQEKETPSLSLANSTKWKKLGDLALNKWNIKLAQESFWLAKDYSSLLLLLSSTQ 776
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGL 769
N +L K+ ++ E K + + +GDV + +L ++ A I +G+
Sbjct: 777 NKSQLIKLAEVCESKGKYNIAWQSWWLVGDVGKCFDLLITSERYTEAVIFGKNYGV 832
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
VVK DR V FHPT P I++ + ++++W V +++ V
Sbjct: 5 VVKQFSTRSDR-VKGIDFHPTEPWILTTLYNGKIEIWSYATNSL--VKSIQVTELPVRAG 61
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHD 310
F A+++ IV S+D IRV++ V F D +A HP + D
Sbjct: 62 KFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSD 117
Score = 82 (33.9 bits), Expect = 4.5e-32, Sum P(3) = 4.5e-32
Identities = 21/88 (23%), Positives = 41/88 (46%)
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
D ++ + FH PWI++ + I IW++ + + + + V F +++ +V
Sbjct: 14 DRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFIARKNWIVVG 73
Query: 154 SLDQTVRVWDIGALRKKTVSPAD-DILR 180
S D +RV++ K T A D +R
Sbjct: 74 SDDFQIRVYNYNTGEKVTQFEAHPDYIR 101
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 411 (149.7 bits), Expect = 7.6e-61, Sum P(2) = 7.6e-61
Identities = 147/576 (25%), Positives = 265/576 (46%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH NVSC
Sbjct: 150 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNVSCA 206
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + II++ SED ++R+W + T +R W +AS N +A G+D G I
Sbjct: 207 SFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 266
Query: 315 VFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQV-----IPIRRPGSTSLNQSP 368
+ KL RE PA ++ + + +AK ++ D ++ +P+ S P
Sbjct: 267 IVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYP 326
Query: 369 RTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARNRFA 427
+T+ ++P V++C D G Y +Y ++ K G + F A +
Sbjct: 327 QTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKSFGSAQEFAWAHDSSE 373
Query: 428 VLDKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLG 486
+ SN A++I+ G G LL R+ + + +D + ++
Sbjct: 374 YAIRESNSVVKIFKNFKEKKSFKPDFGAESIY--G-GFLLGVRSVNGLAFYDWENTELIR 430
Query: 487 DLQTPFVKYVVWSNDMESVALLSKHAIIIA---SKKLVHQCTLHETIR------------ 531
++ K++ WS+ E V + ++ + I S+K++ HE +
Sbjct: 431 RIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLG 489
Query: 532 -----VKSGAWDDNGVFIYTT-LNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCL 583
VK+G W + FIYT+ +N + Y + G+ I LD +Y+ N ++
Sbjct: 490 EIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTMYLLGYIPKDNRLYLG 547
Query: 584 DRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCGQAMIA-YLQQKGFP 637
D++ + ++++ EY + +++R+ + D V+ I Q + +A +L+++GF
Sbjct: 548 DKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ---RTRVAHFLEKQGFK 602
Query: 638 EVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQ 697
+ AL D RF LAL+ G ++IA A E + + W +L A+ + G+ +
Sbjct: 603 QQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLH 662
Query: 698 RTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDV 731
+++ L L +GN ++K+ + AE KN+V
Sbjct: 663 HAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNV 698
Score = 289 (106.8 bits), Expect = 7.6e-61, Sum P(2) = 7.6e-61
Identities = 55/145 (37%), Positives = 88/145 (60%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
+LASL++G + +W++ TL+ F+ D PVR F + V+G DD +I+V+NY
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR-TCISVLTGHNHYVMCAS 142
+ H DYIR + H P+I+++SDD I++W+W + +C V GH HYVM
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 143 FHPKED-LVVSASLDQTVRVWDIGA 166
+PK++ SASLD+T++VW +G+
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGS 145
Score = 265 (98.3 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 54/168 (32%), Positives = 92/168 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDY-RMGTLIDRFDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P+IL S +I+LWD+ + + F+ H V + + K
Sbjct: 66 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 125
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D IKVW FTL GH + + ++ + P+++S +DD+ ++IW
Sbjct: 126 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
++Q++TC+ L GH V CASFHP+ ++++ S D TVR+W R
Sbjct: 186 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYR 233
Score = 189 (71.6 bits), Expect = 2.5e-50, Sum P(2) = 2.5e-50
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ W++ I++++Y + F+ H +R + H
Sbjct: 20 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 79
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K C GH Y+ + + + SAS D+TI+
Sbjct: 80 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 140 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 186
Score = 160 (61.4 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKS--QPLFVSGGDDYKIKVWNYK 81
ASL I++W ++G+ F + H+ V + ++ +P +SG DD +K+W+Y+
Sbjct: 132 ASLDR-TIKVW--QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 188
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
C+ TL GH + FH E P I++ S+D T+RIW+ + S L V C
Sbjct: 189 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 248
Query: 142 S 142
+
Sbjct: 249 A 249
Score = 133 (51.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 139 MCASFHPKEDLVVSASL-DQTVRVWDIGALRKKTVSPADDI-LRLSQMNTDLFGGVDAVV 196
+C H + LV + + D VR A + V+ ADD+ +R+ NT ++ V
Sbjct: 10 VCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNT-----LERV- 63
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL-RGHMNNVSCVM 255
++ E H + A HPT P I++ +DD +KLW + K W + GH + V ++
Sbjct: 64 -HMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD--KKWSCSQVFEGHTHYVMQIV 120
Query: 256 FHAKQDI-IVSNSEDKSIRVWDV 277
+ K + S S D++I+VW +
Sbjct: 121 INPKDNNQFASASLDRTIKVWQL 143
Score = 124 (48.7 bits), Expect = 0.00060, P = 0.00060
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D V A F +V+GADD Q++++ N + V H + + C+ H Q I
Sbjct: 28 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLE--RVHMFEAHSDYIRCIAVHPTQPFI 85
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMN--LLAAGHDSGMIVFKLER 320
+++S+D I++WD K+ H + + + +P+ N +A D + V++L
Sbjct: 86 LTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 145
Query: 321 ERPAFAVSG 329
P F + G
Sbjct: 146 SSPNFTLEG 154
Score = 86 (35.3 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 116 TIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA 175
++ +WN +++T + + V A F +++ VV+ + D +RV++ L + + A
Sbjct: 9 SVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEA 68
Query: 176 -DDILRLSQMN-TDLF---GGVDAVVKYVLEGHDRGVNWAA---F----HPTLPLIVSGA 223
D +R ++ T F D ++K L D+ W+ F H + ++++
Sbjct: 69 HSDYIRCIAVHPTQPFILTSSDDMLIK--LWDWDK--KWSCSQVFEGHTHYVMQIVINPK 124
Query: 224 DDRQVKLWRMNET-KAWEVD------TLRGHMNNVSCVMFHAKQD 261
D+ Q ++ T K W++ TL GH V+C+ +++ D
Sbjct: 125 DNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGD 169
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 360 (131.8 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 62/161 (38%), Positives = 101/161 (62%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
+S RVKG+ FH PWIL +L+SG + +W Y ++I F+ D PVR F + V
Sbjct: 12 RSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIV 71
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR-T 126
G DD++++++NY + + H DYIR++ H P++++ASDD TI++W+W+
Sbjct: 72 CGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWK 131
Query: 127 CISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA 166
C+ V GH+HYVM + +PK+ + SA LD+TV++W +G+
Sbjct: 132 CVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGS 172
Score = 347 (127.2 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 161/643 (25%), Positives = 270/643 (41%)
Query: 198 YVLEGHD-RGVNWAAFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ LE H+ +GVN ++P P +++ +DD+ VK+W TKA + TL GH +NVS
Sbjct: 177 FTLEAHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWDYT-TKAL-IATLEGHTSNVSFA 234
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
+H + +I+S SED +I++W Q+ +R W ++ +A G D G +
Sbjct: 235 CYHPELPVIISGSEDGTIKIWHANTYRLEQSLSYGLERAWCVSYQRGKQGVALGFDDGAV 294
Query: 315 VFKLERERPAFAVSGDSLFYAKDRFLRYYEF-STQ-K--DTQV---IPIRRPGST--SLN 365
V K+ RE PA ++ G K + R+ E ST K DT V PI P S
Sbjct: 295 VVKMGREEPAVSMDGSG----KIVWARHNEVVSTVIKGGDTSVKDGAPISLPTKDLGSCE 350
Query: 366 QSPRTLSYSPTENAVLICSDVDGGSYELYVI---PKDSIGRG-DSVQDAKKGLGGSAIFI 421
P+TLS+SP V +C D G Y +Y + G+ D +K AI
Sbjct: 351 VYPQTLSHSPNGRFVSVCGD---GEYIIYTALAWRNKAFGQALDFAWGSKDNSNDYAIRE 407
Query: 422 ARNR---FAVLDKSSNQXXXXXXXXXXXXXSILPIAADA---IFYAGTGNLLCR--AEDR 473
+ F + S +L + +F TGNL+ R E R
Sbjct: 408 SATSVKIFKNFKEVSGGLDVGFQAEGLTGGVLLGVRGQGGIGMFDWETGNLVRRIEVEPR 467
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVV-WSNDMESVALLSKHAIIIASKKLVHQCT-LHETIR 531
V + LV F YV+ +S + L + A + T ++E++R
Sbjct: 468 NVYWSESGELVTLACDDTF--YVLRFSRENYINGLNAGEADEDGVESAFEVVTDVNESVR 525
Query: 532 VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGI-IRTLDVPIYITKV--SGNTIFCLDRDG 587
+G W + FIYT + N + Y + GD I D P+Y+ ++ D+D
Sbjct: 526 --TGQWVGD-CFIYTNSTNRLNYLV--GDQTYTISHFDQPMYVLGYLPRDGRVYVADKDV 580
Query: 588 KNRAIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIA-YLQQKGFPEVALHFVKD 646
+ + + ++ +LR + ++++ +A +L+ +G+ E+AL D
Sbjct: 581 NAVSFALSLSMVEYQTVVLRGDMELAAELLQDIPQDQMNKVARFLEGQGYKELALEVATD 640
Query: 647 ERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLS 706
+ RF LAL N+ IA+ A+ + + W +G AL N + + + K+ L
Sbjct: 641 QEHRFELALALNNLDIALEIARAANAEHKWKVVGDAALSAWNLSLAQECFISAKDVGSLL 700
Query: 707 FLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASV 766
L+ +GN + L + A F LGDV + +L L + + A
Sbjct: 701 LLHTASGNREGLQALASQASDAGLHNVAFSTLWSLGDVDGCIDLLVQTNRLAESVLFAQT 760
Query: 767 HGLQDVAERLAAELGDNVPSVPEGKAPSLL-MPP-SPVVCSGD 807
+ E L +++ + K L+ +PP +P V + D
Sbjct: 761 YKPSRAPE-LVVRWKESLEQSGKAKISRLIGVPPGAPGVPADD 802
Score = 224 (83.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 44/172 (25%), Positives = 89/172 (51%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHDGPVRGVHFH 60
+ FE + ++ ++ H +P++L + I+LWD+ G + ++ H V G+ +
Sbjct: 90 IASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAIN 149
Query: 61 -KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH-LDYIRTVQFHHEY--PWIVSASDDQT 116
K F S D +K+W+ FTL H + V ++ + P++++ SDD+T
Sbjct: 150 PKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTTSDDKT 209
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
+++W++ ++ I+ L GH V A +HP+ +++S S D T+++W R
Sbjct: 210 VKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWHANTYR 261
Score = 178 (67.7 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 43/168 (25%), Positives = 82/168 (48%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ FE V+ F +++ WI+ +++++Y I F+ H +R + H
Sbjct: 47 IIKTFELTDVPVRAGRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVH 106
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK+W++ K +C+ GH Y+ + + + SA D+T++
Sbjct: 107 PTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVK 166
Query: 119 IWNWQSRTCISVLTGHNHY-VMCASFHPKED--LVVSASLDQTVRVWD 163
IW+ S L H V ++P+ D +++ S D+TV+VWD
Sbjct: 167 IWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWD 214
Score = 126 (49.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 199 VLEGHDRGVNWAAFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGH-MNNVSCVMF 256
V EGH V A +P S DR VK+W + A TL H V+ V +
Sbjct: 135 VYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHA--NFTLEAHETKGVNHVDY 192
Query: 257 HAKQD--IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
+ + D +++ S+DK+++VWD T + + T HPE+ ++ +G + G I
Sbjct: 193 YPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTI 252
Score = 75 (31.5 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 16/81 (19%), Positives = 38/81 (46%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L + ++ + FH PWI++ + IW++++++ I + V F +++
Sbjct: 9 LFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKN 68
Query: 149 LVVSASLDQTVRVWDIGALRK 169
+V S D +R+++ K
Sbjct: 69 WIVCGSDDFQLRIYNYNTSEK 89
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 376 (137.4 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 159/633 (25%), Positives = 272/633 (42%)
Query: 189 FGGVDAVVKYVLEGHDRGVNWAAFHPT--LPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
FG +V + L+ HDRGVN+ ++P P +++ DD +K+W +TKA V L G
Sbjct: 171 FGS--SVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDY-QTKAC-VRILEG 226
Query: 247 HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLA 306
H NNVS FH+K II+S SED ++++W + ++++ DR W +A + + L+
Sbjct: 227 HTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVT 286
Query: 307 AGHDSGMIVFKLERERPAFAV--SGDSLF--YAK--DRFLR-YYEFSTQKDTQVIP--IR 357
G D+G+I F L R+ P+ + SG ++ Y + +R E S D +I ++
Sbjct: 287 VGFDNGLITFSLGRDEPSVTMDSSGKVVWSNYNEVMSAMIRPAKEQSDLTDGSLISLSVK 346
Query: 358 RPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRG-DSVQDAKKGLGG 416
G+T L P L +SP V +C + + Y + G+ D A + G
Sbjct: 347 ELGTTELY--PAVLKHSPNGRFVSVCGNGEYIVYTALAWRNKAYGKALDFAWSADSNVYG 404
Query: 417 SAIFIARNRFAVLDKS---SNQXXXXXXXXXXXXXSILPIA-ADAI-FYAGTGNLLCRAE 471
S +R V+ K+ SN+ +L + +D I FY +L R
Sbjct: 405 SR---TSDRSIVIHKNFKESNRLDLSYSCDKIFGGFLLGVVGSDFICFYDWDTGILVRKI 461
Query: 472 D---RVVIFDLQQRLVLGDLQTPFVKYVVWSN-DMESVALLSKHAIIIASKKLVHQCTLH 527
D + V ++ R V+ F Y++ N +M A+ S A +
Sbjct: 462 DVKPKGVYWNDDGRFVILACDDDF--YLLGFNAEMFYSAVESGTADEEEGVADSFEALAD 519
Query: 528 ETIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGI-IRTLDVPIYITKV--SGNTIFCL 583
+ V +G W FIYTT + Y + GD I ++ Y+ + I+
Sbjct: 520 VSESVVNGKWVAE-TFIYTTTAARLNYLI--GDQTYKIANVESSFYLLGYIPRDDRIYLT 576
Query: 584 DRDGKNRAIVIDATEYIFKLSLLRKRYDHVMSMIRN-SQLCGQAMIAYLQQKGFPEVALH 642
DRD + + ++ +L+ + ++ S+ + +L + G+ E AL
Sbjct: 577 DRDMNVVSYSFNLAIIEYQSLVLKGDLEAAQGLLEQISETDRPRLSDFLSRLGYKEAALE 636
Query: 643 FVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNF 702
D RF LAL++ + IA A+E+D+ W LG AL + + + +++ K++
Sbjct: 637 LSGDSVQRFELALDAQRLDIASQIAQELDDPLKWRSLGDAALNAWDFVLAQECFEKGKDY 696
Query: 703 ERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYI 762
L LY T N + L ++ ++ + F + E V IL S P A +
Sbjct: 697 GSLVLLYTATNNHEGLKELSQLTKSTKINNTAFICSWLTNQPAECVNILTSTQRYPEANL 756
Query: 763 TASVHGLQDVAERLAAELGDNVPSVPEGKAPSL 795
A+ + +V L D + E A SL
Sbjct: 757 FAATYCPDEVKNVLPEWKVDLTKNQKERIADSL 789
Score = 328 (120.5 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 60/165 (36%), Positives = 97/165 (58%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K + + RVK + FH PW++AS ++G + +W+Y TL+ FD +D P+R F +
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
FV G DD++++V+NY + H DYIR + H P+++++SDD TI+ +NW
Sbjct: 69 NWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWD 128
Query: 124 -SRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA 166
S C+ GH+ YVM + +PK+ + S+ LD TV+VW G+
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGS 173
Score = 227 (85.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 47/165 (28%), Positives = 88/165 (53%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHDGPVRGVHFH 60
+T+FE + ++ L H +P++L S I+ +++ M + F+ H V + +
Sbjct: 91 VTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAIN 150
Query: 61 -KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTI 117
K F S D +KVW++ FTL H + V ++ + P++++A DD I
Sbjct: 151 PKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLI 210
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
++W++Q++ C+ +L GH + V A FH K +++S S D TV++W
Sbjct: 211 KVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
Score = 190 (71.9 bits), Expect = 4.3e-46, Sum P(2) = 4.3e-46
Identities = 37/167 (22%), Positives = 84/167 (50%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ F+ ++ +F +++ W + +++++Y G + +F+ H +R + H
Sbjct: 48 LVRSFDINDVPIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVH 107
Query: 61 KSQPLFVSGGDDYKIKVWNYKMH-RCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QP ++ DD IK +N+ M +C+ T GH Y+ ++ + + S+ D T++
Sbjct: 108 PTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVK 167
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W++ S L H+ V +++P D +++A D ++VWD
Sbjct: 168 VWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWD 214
Score = 180 (68.4 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 46/166 (27%), Positives = 83/166 (50%)
Query: 5 FETKSNRVKGLSFHSKRPWILAS-LHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHK 61
FE S V L+ + K AS G +++W + G+ + F HD V V+++
Sbjct: 137 FEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSF--GSSVANFTLQAHDRGVNYVNYYP 194
Query: 62 S--QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ +P ++ GDD IKVW+Y+ C+ L GH + + FH ++P I+S S+D T++I
Sbjct: 195 AGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKI 254
Query: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
W+ S + I C + + K++ +V+ D + + +G
Sbjct: 255 WHTLSYSLIKSYNFSLDRAWCIAQN-KDNGLVTVGFDNGLITFSLG 299
Score = 105 (42.0 bits), Expect = 3.6e-37, Sum P(2) = 3.6e-37
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
LL H + ++ V FH PW++++ + + IWN+ ++T + ++ + +F +++
Sbjct: 10 LLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARKN 69
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPAD-DILR 180
V S D VRV++ K T A D +R
Sbjct: 70 WFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIR 102
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 388 (141.6 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 158/634 (24%), Positives = 278/634 (43%)
Query: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSCV 254
+ LEGH++GVN ++ P ++SGADDR VK+W N+T V TL GH N+S V
Sbjct: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC---VQTLEGHAQNISAV 235
Query: 255 MFHAKQDIIVSNSEDKSIRVWDV-TKRTGVQT-FRREHDRFWILASHPEMNLLAAGHDSG 312
FH + I+++ SED ++R+W T R ++T +R W ++S N +A G+D G
Sbjct: 236 CFHPELPIVLTGSEDGTVRIWHSGTYR--LETCLNYGFERVWTISSMRGTNNVALGYDEG 293
Query: 313 MIVFKLERERPAFA--VSGDSLFYAKDRFLRYYEFSTQKD-TQV-----IPIRRPGSTSL 364
I+ K+ RE PA + V G + +AK ++ T D T++ +P+ +
Sbjct: 294 SIIIKVGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGTEIKDGERLPVATKDMGAC 353
Query: 365 NQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFIARN 424
P+T++++P V++C D + Y + + G S Q+ L + I N
Sbjct: 354 EIYPQTIAHNPNGRFVVVCGDGEYIIYTSMALRNKAFG---SAQEFVWALESNEYAIREN 410
Query: 425 RFAVL-------DKSSNQXXXXXXXXXXXXXSILPIAADAIFYAGTGNLLCRAE--DRVV 475
V KS + + A + T L+ R E + V
Sbjct: 411 NGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEVQPKNV 470
Query: 476 IFDLQQRLVLGDLQTPFVKYVVWSNDMESVA--LLSKHAIIIASKKLVHQCTLHETIRVK 533
++ LV L T Y V D VA + +K + + + VK
Sbjct: 471 FWNESGSLVC--LATDD-SYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVK 527
Query: 534 SGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDVPIYITKV--SGNTIFCLDRDGKNR 590
+G W + FIYT ++N I Y + G+ + LD +Y+ N I+ D++
Sbjct: 528 TGLWVGD-CFIYTNSVNRINYYV-GGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVI 585
Query: 591 AIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIA-YLQQKGFPEVALHFVKDERT 649
+ + + ++ +++R+ ++ ++ + +A +L+++GF AL D
Sbjct: 586 SFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHRTRVAHFLEKQGFKSQALQVSTDADH 645
Query: 650 RFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLY 709
+F+LAL+ G+++IA+ A+E + W +L A + N +V+ Q+ + L L
Sbjct: 646 KFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGL--LL 703
Query: 710 LITGNMDKLSKMLKIAEVKNDVMGQFHNALYLG-----DVKERVKILESAGHLPLAYITA 764
L T + D +++L++ G HN +L DV+ ++IL LP A A
Sbjct: 704 LSTASGD--AQLLEVVGAAGSAQGH-HNLAFLSAFLRSDVERCLEILIETNRLPEAAFFA 760
Query: 765 SVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
+ L R+ + + V E SL P
Sbjct: 761 RTY-LPSQMSRIVELWREKLGKVNEKAGQSLADP 793
Score = 318 (117.0 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 58/165 (35%), Positives = 97/165 (58%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+ ++S+RVK + H PW+L +L++G + + +Y ++ F+ D PVR F +
Sbjct: 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
++G DD +I+V+NY + + H DY+R + H P ++++SDD I++WNW+
Sbjct: 70 NWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
C V GH HYVM F+PK++ SASLD+TV+VW +G+
Sbjct: 130 KMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGS 174
Score = 266 (98.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 54/171 (31%), Positives = 93/171 (54%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHDGPVRGVHFH-KS 62
FE S+ ++ ++ H +P +L S +I+LW++ R F+ H V + F+ K
Sbjct: 95 FEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKD 154
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
F S D +KVW + FTL GH + V ++H + P+++S +DD+ ++IW
Sbjct: 155 NNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT 171
++Q++TC+ L GH + FHP+ +V++ S D TVR+W G R +T
Sbjct: 215 DYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLET 265
Score = 212 (79.7 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
M+ FE V+ F +++ WIL I++++Y + F+ H +R + H
Sbjct: 49 MVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
+QPL ++ DD IK+WN+ KM C GH Y+ + F+ + SAS D+T++
Sbjct: 109 PTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVK 168
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
+W S L GH V C ++ D ++S + D+ V++WD
Sbjct: 169 VWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 42/164 (25%), Positives = 73/164 (44%)
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILR----LSQMN 185
LT + V C HP E ++ A + V + + + K D +R +++ N
Sbjct: 11 LTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARKN 70
Query: 186 TDLFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
L G D ++ + E H + A HPT PL+++ +DD +KLW N
Sbjct: 71 WILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLW--NW 128
Query: 236 TKAWEVDTL-RGHMNNVSCVMFHAKQD-IIVSNSEDKSIRVWDV 277
K W + GH + V ++F+ K + S S D++++VW +
Sbjct: 129 EKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQL 172
Score = 88 (36.0 bits), Expect = 2.0e-36, Sum P(2) = 2.0e-36
Identities = 40/188 (21%), Positives = 80/188 (42%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L D ++ V H PW++ A + + I N++++ + + V A F +++
Sbjct: 11 LTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARKN 70
Query: 149 LVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVDAVVKYVLEGH 203
+++ S D +RV++ L K + D LR ++ L D ++K L
Sbjct: 71 WILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIK--LWNW 128
Query: 204 DRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGHMN 249
++ WA F H + ++ + D+ ++ T K W++ TL GH
Sbjct: 129 EK--MWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEK 186
Query: 250 NVSCVMFH 257
V+CV ++
Sbjct: 187 GVNCVDYY 194
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 350 (128.3 bits), Expect = 5.2e-57, Sum P(3) = 5.2e-57
Identities = 60/163 (36%), Positives = 96/163 (58%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F +S+RVKG+ FH PW+L +L+SG ++LW+Y + + PVR F +
Sbjct: 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+ G DD++I+V+NY + H DYIR++ H P+++S SDD T+++WNW++
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128
Query: 125 RTCIS-VLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIG 165
+ GH H+VMC +F+PK+ S LD+TV+VW +G
Sbjct: 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171
Score = 247 (92.0 bits), Expect = 5.2e-57, Sum P(3) = 5.2e-57
Identities = 87/331 (26%), Positives = 155/331 (46%)
Query: 202 GHDRGVNWAAFHPT--LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
G +RGVN+ ++P P +++ +DD +K+W +TK+ V TL GHM+NVS +FH
Sbjct: 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY-QTKSC-VATLEGHMSNVSFAVFHPT 239
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP--EMNLLAAGHDSGMIVFK 317
II+S SED ++++W+ + +T +R W +A+HP N +A+G D+G V
Sbjct: 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299
Query: 318 LERERPAFAV--------SGDSLFYAKDRF---LRYYEFSTQKDTQVIPIRRPGSTSLNQ 366
L + P ++ SG A D F +R E Q + + + GS +
Sbjct: 300 LGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDV-- 357
Query: 367 SPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI---AR 423
P++L++SP V + D G Y +Y ++ K G F+
Sbjct: 358 FPQSLAHSPNGRFVTVVGD---GEYVIYT----------ALAWRNKAFGKCQDFVWGPDS 404
Query: 424 NRFAVLDKSSNQXXXXXXXXXXXXXSI-LPIAADAIFYAGTGNLL-CRAEDRVVIFDLQQ 481
N +A++D++ Q S+ + A D +F +G LL +++ V FD
Sbjct: 405 NSYALIDETG-QIKYYKNFKEVTSWSVPMHSAIDRLF---SGALLGVKSDGFVYFFDWDN 460
Query: 482 RLVLGDLQTPFVKYVVWSNDMESVALLSKHA 512
++ + K V+WS++ E V +++ ++
Sbjct: 461 GTLVRRIDVN-AKDVIWSDNGELVMIVNTNS 490
Score = 243 (90.6 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 51/175 (29%), Positives = 99/175 (56%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHDGPVRGVHFHKSQ 63
FE + ++ ++ H +P++L+ ++LW++ +++ F+ H+ V V F+
Sbjct: 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD 152
Query: 64 P-LFVSGGDDYKIKVWNYKMHRCLFTLL-GHLDYIRTVQFHH--EYPWIVSASDDQTIRI 119
P F SG D +KVW+ FTL G + V ++ + P++++ASDD TI+I
Sbjct: 153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVS 173
W++Q+++C++ L GH V A FHP +++S S D T+++W+ + +KT++
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267
Score = 169 (64.5 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 46/168 (27%), Positives = 74/168 (44%)
Query: 5 FETKSNRVKGLSFHSKRPWILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
FE + V ++F+ K P AS +++W +G F G RGV++
Sbjct: 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS--LGQSTPNFTLTTGQERGVNYVDYY 193
Query: 64 PL-----FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
PL ++ DD IK+W+Y+ C+ TL GH+ + FH P I+S S+D T++
Sbjct: 194 PLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLK 253
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIG 165
IWN + L C + HP +++ D V +G
Sbjct: 254 IWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301
Score = 145 (56.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 44/155 (28%), Positives = 71/155 (45%)
Query: 143 FHPKEDLVVSASLDQTVRVWDIGA-LRKKTVSPADDILR----LSQMNTDLFGGVD---A 194
FHP E V++ V +W+ + +++ + +R +++ N + G D
Sbjct: 21 FHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80
Query: 195 VVKY-----VL--EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
V Y V+ E H + A HPT P ++SG+DD VKLW A E T GH
Sbjct: 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE-QTFEGH 139
Query: 248 MNNVSCVMFHAKQ-DIIVSNSEDKSIRVWDVTKRT 281
+ V CV F+ K S D++++VW + + T
Sbjct: 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174
Score = 123 (48.4 bits), Expect = 5.2e-57, Sum P(3) = 5.2e-57
Identities = 58/248 (23%), Positives = 105/248 (42%)
Query: 532 VKSGAWDDNGVFIYTTL-NHIKYCLPNGDSGIIR-TLDVPIYITKVSGNTIFCLDRDGKN 589
+ SG W + VFI+TT N + Y + + T ++ + N ++ DR+
Sbjct: 536 ITSGKWVGD-VFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHV 594
Query: 590 RAIVIDATEYIFKLSLLRKRYDHVM-SMIRNSQ-LCGQAMIA-YLQQKGFPEVALHFVKD 646
I F+ LR + + +++ N + IA +L+ + + E AL+ D
Sbjct: 595 YGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPD 654
Query: 647 ERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLS 706
+ +F LAL+ G + +A + + W LG +L++ N + A+ + E L
Sbjct: 655 QDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLF 714
Query: 707 FLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYL-GDVKERVKILESAGHLPLAYITAS 765
L+ N + L + K AE F NA ++ GD++ +L + A S
Sbjct: 715 LLHSSFNNKEGLVTLAKDAERAGKFNLAF-NAYWIAGDIQGAKDLLIKSQRFSEAAFLGS 773
Query: 766 VHGLQDVA 773
+GL D A
Sbjct: 774 TYGLGDDA 781
Score = 118 (46.6 bits), Expect = 4.6e-43, Sum P(4) = 4.6e-43
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH-- 257
LEGH V++A FHPTLP+I+SG++D +K+W + K + TL + C+ H
Sbjct: 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK--TLNVGLERSWCIATHPT 281
Query: 258 AKQDIIVSNSED 269
+++ I S ++
Sbjct: 282 GRKNYIASGFDN 293
Score = 102 (41.0 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 50/196 (25%), Positives = 83/196 (42%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
DR V FHPT P +++ +V+LW ET+ EV +++ V F A+++ I
Sbjct: 14 DR-VKGIDFHPTEPWVLTTLYSGRVELWNY-ETQV-EVRSIQVTETPVRAGKFIARKNWI 70
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERP 323
+ S+D IRV++ V F D +A HP + +G D + KL
Sbjct: 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD--LTVKLWNWEN 128
Query: 324 AFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPGSTSLNQSPRTLSYSP-TENAVLI 382
+A+ + F + F+ F+ KD S L+++ + S T N L
Sbjct: 129 NWAL--EQTFEGHEHFVMCVAFNP-KDPSTF-----ASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 383 CSDVDGGSY-ELYVIP 397
G +Y + Y +P
Sbjct: 181 TGQERGVNYVDYYPLP 196
Score = 82 (33.9 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 31/146 (21%), Positives = 58/146 (39%)
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
T D ++ + FH PW+++ + +WN++++ + + V F ++
Sbjct: 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK 67
Query: 148 DLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMNTD----LFGGVDAVVKY---- 198
+ ++ S D +RV++ K A D +R ++ L G D VK
Sbjct: 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127
Query: 199 -------VLEGHDRGVNWAAFHPTLP 217
EGH+ V AF+P P
Sbjct: 128 NNWALEQTFEGHEHFVMCVAFNPKDP 153
Score = 37 (18.1 bits), Expect = 4.6e-43, Sum P(4) = 4.6e-43
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 310 DSGMIVFKLERERPAFAVSGDSLFYAKDRFL 340
D+G +V + SG +L + KD +L
Sbjct: 478 DNGELVMIVNTNSNGDEASGYTLLFNKDAYL 508
>RGD|1310525 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10116 "Rattus norvegicus" [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] InterPro:IPR006692 InterPro:IPR010714
Pfam:PF04053 Pfam:PF06957 RGD:1310525 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 GO:GO:0005198 GO:GO:0030157 GO:GO:0030126
UniGene:Rn.203109 EMBL:BC091312 IPI:IPI00372458 STRING:Q5BJV4
PRIDE:Q5BJV4 HOVERGEN:HBG068904 InParanoid:Q5BJV4
ArrayExpress:Q5BJV4 Genevestigator:Q5BJV4 Uniprot:Q5BJV4
Length = 568
Score = 454 (164.9 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 89/172 (51%), Positives = 121/172 (70%)
Query: 659 NIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKL 718
NI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITGN++KL
Sbjct: 1 NIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKL 60
Query: 719 SKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAA 778
KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + AE L
Sbjct: 61 RKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKE 120
Query: 779 ELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRG 828
++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 121 TFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKG 172
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 307 (113.1 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 54/163 (33%), Positives = 99/163 (60%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F + S+RVK + FHS++PWIL +LH+G +Q+W+Y TL+ + + R F +
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKN 162
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+ DD +I++++ + + H D+IR++ H P+++SASDD+ IR+W+W++
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWEN 222
Query: 125 RTCISV-LTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIG 165
+ H HY+M + +P++ ++ VS SLD+T++VW +G
Sbjct: 223 EWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLG 265
Score = 293 (108.2 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 81/290 (27%), Positives = 144/290 (49%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F H V+ V FH +P ++ +++WNY + + R +F H
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKN 162
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG- 165
WI +ASDDQ IRI++ ++ + I+ T H+ ++ + HP ++SAS D+ +RVWD
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWEN 222
Query: 166 --ALRKKTVSPADDILRLSQMNTD--LF--GGVDAVVKY----------VLEGHDRGVNW 209
+ ++ A I++++ D +F G +D +K LEGH++GVN
Sbjct: 223 EWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNC 282
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG-HMNNVSCVMFHAKQDIIVSNSE 268
F T IVSG+DD + +W + K ++TL+ H NNV+ V + I+S +E
Sbjct: 283 VEFL-TGGRIVSGSDDCSICVWDIQTQKC--IETLKNAHKNNVTFVT--PFKTWIISGAE 337
Query: 269 DKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKL 318
D ++++W+ + + E R W +A+ + + +A G DSG + ++
Sbjct: 338 DSTVKIWNSQTFSLEKELNFEKGRAWCVAAG-KSDAIAVGFDSGAVTVEI 386
Score = 194 (73.4 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 54/203 (26%), Positives = 93/203 (45%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ E + F ++ WI + I+++D +LI+ F H +R + H
Sbjct: 141 LVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVH 200
Query: 61 KSQPLFVSGGDDYKIKVWNYKMH-RCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIR 118
+ P +S DD KI+VW+++ R H YI + + E P VS S D+T++
Sbjct: 201 PTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLK 260
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPA-- 175
+W + I L GH V C F +VS S D ++ VWDI + +T+ A
Sbjct: 261 VWKLGEQESICTLEGHEKGVNCVEFLTG-GRIVSGSDDCSICVWDIQTQKCIETLKNAHK 319
Query: 176 DDILRLSQMNTDLFGGV-DAVVK 197
+++ ++ T + G D+ VK
Sbjct: 320 NNVTFVTPFKTWIISGAEDSTVK 342
Score = 187 (70.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 57/223 (25%), Positives = 99/223 (44%)
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
+R + H D +++V FH E PWI++A ++IWN+ ++T + + A
Sbjct: 97 NRAAPNFVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAK 156
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMNTDLFGGVDAVVKYVLE 201
F +++ + +AS DQ +R++D A D +R ++ L + A +
Sbjct: 157 FIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIR 216
Query: 202 GHDRGVNWAA---F----HPTLPLIVSGADDRQVKLWRMNET-KAWEVD------TLRGH 247
D W F H + + V+ D +++T K W++ TL GH
Sbjct: 217 VWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGH 276
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
V+CV F IVS S+D SI VWD+ + ++T + H
Sbjct: 277 EKGVNCVEF-LTGGRIVSGSDDCSICVWDIQTQKCIETLKNAH 318
Score = 37 (18.1 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 711 ITGNMDKLSKMLKIAE 726
++G++DK K+ K+ E
Sbjct: 251 VSGSLDKTLKVWKLGE 266
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 341 (125.1 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 170/754 (22%), Positives = 313/754 (41%)
Query: 54 VRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL-LGHLDYIRTVQFHHEYPWIVSAS 112
V+ V H ++P ++ D + +WNY+ + + + + +RT +F + WIV+ S
Sbjct: 18 VKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGS 77
Query: 113 DDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
DD IR++N+ + I H Y+ C HP ++S+S D +++WD T
Sbjct: 78 DDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQ 137
Query: 173 ---SPADDILRLS--QMNTDLFG--GVDAVVK----------YVLEGHDRGVNWAAFHP- 214
+ ++ ++ +T+ F +D VK + LEGH++G+N +
Sbjct: 138 VFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSG 197
Query: 215 -TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P ++SGADD+ VK+W ++K V TL GH NNVS V +H + +I+S SED +++
Sbjct: 198 GEKPYLISGADDKLVKIWDY-QSKTC-VQTLEGHSNNVSVVCYHPELPLILSGSEDGTVK 255
Query: 274 VWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVS-GDSL 332
+W + +T W + N + G+D G +V K+ + +P ++ G +
Sbjct: 256 LWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMDQGGKV 315
Query: 333 FYAKDRFLRYYEFSTQKDTQVIPIRRPG--STSL-NQSPRTLSYSPTENAVLICSDVDGG 389
YAK +R S+ + +V + S L N S N + S G
Sbjct: 316 IYAKHNEIRISNISSTLEQEVQDGEKLSLQSKDLGNCEVFPQSLQHNSNGRFV-SVCGDG 374
Query: 390 SYELYVIPKDSIGRGDSVQDAKKGLGGSAIFI-ARN--RFAVLDKSSNQXXXXXXXXXXX 446
+ +Y ++ K G + F+ A + ++AV + +S
Sbjct: 375 EFIIYT----------ALAWRNKSFGNALEFVWAEDSGQYAVRESTSR---IKIFKNFKE 421
Query: 447 XXSILP-IAADAIFYAGTGNLL-CRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMES 504
S P +A+ IF G G+LL ++ D + + ++ ++ K + WS + +
Sbjct: 422 THSFKPSFSAEGIF--G-GSLLGVKSNDTLCFYSWDSADIIRRIEKTSPKNIFWSENGDY 478
Query: 505 VALLSKHAIIIASKKLVHQCTLHETIRVKSGA-WDDNGVF-IYTTLNHIKYCLPNGDSGI 562
+A+++ + I ++ T+ + I +SG + G+ + ++ I+ + G
Sbjct: 479 LAIVTDKSTFILR---YYKDTVQKYI--ESGQPIGELGIENAFDVVHEIEDTIGTG---- 529
Query: 563 IRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATE---YIFK-------LSLLRKRYDH 612
+ D IYI + S +C+ + + I E Y+ K L L K +
Sbjct: 530 LWVGDCFIYINR-SSKLNYCVGTE----VVTISHLEKHMYLLKYLPQSGRLYLSDKNLNI 584
Query: 613 VMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEID- 671
V + S + Q I +G + +D+R LES + A E+
Sbjct: 585 VSYKLHISVISYQTSILRGDLEGAERILPKIPQDQRNSIAHFLESQGYK---EKALEVST 641
Query: 672 EKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDV 731
+ DH + L ++ A + F+ L L L G + LK AE D+
Sbjct: 642 DLDHRFELAIQLENLDVAHEIALKSDSETKFKHLGDLALSIGEIKLAENCLKKAE---DL 698
Query: 732 MGQFHNALYLGDV---KERVKILESAGHLPLAYI 762
G GD+ K K+ E G +++I
Sbjct: 699 PGLLLLYTSTGDIEGMKMLAKLSEEKGQTNISFI 732
Score = 322 (118.4 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 62/166 (37%), Positives = 99/166 (59%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFD-EHDGPVRGVHFHKS 62
K T+S+RVK + H PWILASL+ G + +W+Y ++ F+ + PVR F
Sbjct: 10 KLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAK 69
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
+ V+G DD I+V+NY + + H DYIR + H P+I+S+SDD I++W++
Sbjct: 70 KQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Query: 123 QSR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA 166
+ + V GH+HYVM +++PK+ + +ASLD+TV+VW I +
Sbjct: 130 EKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINS 175
Score = 260 (96.6 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 55/177 (31%), Positives = 98/177 (55%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHDGPVRGVHFH 60
+ FE ++ ++ + H P+IL+S I+LWDY G + F+ H V + ++
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
Query: 61 -KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTI 117
K F + D +KVW+ FTL GH I +V++ E P+++S +DD+ +
Sbjct: 153 PKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLV 212
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVS 173
+IW++QS+TC+ L GH++ V +HP+ L++S S D TV++W R ++T++
Sbjct: 213 KIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLN 269
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 36/168 (21%), Positives = 84/168 (50%)
Query: 20 KRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWN 79
++P++++ ++++WDY+ T + + H V V +H PL +SG +D +K+W+
Sbjct: 199 EKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH 258
Query: 80 YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
+R TL + ++ ++ F +I DD T+ + +++ +S+ G V+
Sbjct: 259 SSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMDQGGK--VI 316
Query: 140 CASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
A + +S++L+Q V+ + +L+ K + + + Q N++
Sbjct: 317 YAKHNEIRISNISSTLEQEVQDGEKLSLQSKDLGNCEVFPQSLQHNSN 364
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 338 (124.0 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 96/306 (31%), Positives = 147/306 (48%)
Query: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
W ++ + +Q++ + +F HD V V F L S D +K+W+
Sbjct: 235 WNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT 294
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
TL GH +++++V F H+ + SASDD T++IW+ + T +L GHN V
Sbjct: 295 SFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVV 354
Query: 143 FHPKEDLVVSASLDQTVRVWDI--GALRKK---------TVSPADDILRLSQM----NTD 187
F L+ S S D+TVR+W+ G LR VS A D RL+ N
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
++ ++ VLEGHD VN +F P L+ S +DDR VK+W T + + TL GH
Sbjct: 415 IWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA-ATGSLQ-RTLEGH 472
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA---SHPEMNL 304
+ V V+F +I S S+D ++++WD T +Q HD W+ + SH + L
Sbjct: 473 NDWVRSVVFSHDSRLIASASDDMTVKIWD-TATVPLQNNLESHDN-WVRSVVFSH-DSRL 529
Query: 305 LAAGHD 310
LA+ D
Sbjct: 530 LASASD 535
Score = 323 (118.8 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
Identities = 100/327 (30%), Positives = 151/327 (46%)
Query: 12 VKGLSF-HSKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
VK + F H R +LAS G +++WD GTL H+ VR V F L SG
Sbjct: 308 VKSVVFSHDSR--LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASG 365
Query: 70 GDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129
+D +++W T H D + V F H+ + SASD ++IW+ ++ + +
Sbjct: 366 SNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQN 425
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTD 187
VL GH+ V SF P L+ SAS D+TV++W G+L++ T+ +D +R + D
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR-TLEGHNDWVRSVVFSHD 484
Query: 188 --LFGGV--DAVVKYV----------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
L D VK LE HD V F L+ S +DD VK+W
Sbjct: 485 SRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD- 543
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
T + E +TL GH + V+ V F ++ S S+D ++++W T TF
Sbjct: 544 TATGSLE-NTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVA 602
Query: 294 WILASHPEMNLLAAGHDSGMI-VFKLE 319
LA NLLA+ D G + ++ +E
Sbjct: 603 ISLAFSHTSNLLASAMDDGTVKIWDME 629
Score = 305 (112.4 bits), Expect = 6.1e-22, Sum P(3) = 6.1e-22
Identities = 92/328 (28%), Positives = 145/328 (44%)
Query: 4 KFETKSNRVKGLSF-HSKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
+F+ V +SF H R +LAS G +++WD L + + H+ V+ V F
Sbjct: 258 QFKGHDRAVGSVSFSHDSR--LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSH 315
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L S DD +K+W+ L GH D +R+V F H+ I S S+D+T+RIW
Sbjct: 316 DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWE 375
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRK---------K 170
+ H VM SF + SAS V++WD G+L+
Sbjct: 376 TTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVN 435
Query: 171 TVSPADDILRLSQMNTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
+VS + D L+ + D ++ ++ LEGH+ V F LI S +DD
Sbjct: 436 SVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDM 495
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
VK+W T + + L H N V V+F ++ S S+D ++++WD + T
Sbjct: 496 TVKIWD-TATVPLQ-NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTL 553
Query: 287 RREHDRFWILASHPEMNLLAAGHDSGMI 314
DR ++ P+ LLA+ D G +
Sbjct: 554 EGHDDRVNSVSFSPDSRLLASASDDGTV 581
Score = 285 (105.4 bits), Expect = 8.7e-20, Sum P(3) = 8.7e-20
Identities = 79/245 (32%), Positives = 117/245 (47%)
Query: 5 FETKSNRVKGLSF-HSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
FE + V +SF H R AS G +++WD R G+L + + HD V V F
Sbjct: 385 FEDHEDSVMAVSFAHDSRRLASAS-DGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L S DD +K+W+ TL GH D++R+V F H+ I SASDD T++IW+
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL---------RKKTV 172
+ + L H+++V F L+ SAS D TV++WD G+L R +V
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSV 563
Query: 173 SPADDILRLSQMNTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
S + D L+ + D ++ V++ +G R AF T L+ S DD V
Sbjct: 564 SFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTV 623
Query: 229 KLWRM 233
K+W M
Sbjct: 624 KIWDM 628
Score = 285 (105.4 bits), Expect = 8.7e-20, Sum P(3) = 8.7e-20
Identities = 83/300 (27%), Positives = 139/300 (46%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF-HKSQPLF 66
++ V+ + F H R I + + +++W+ G L F++H+ V V F H S+ L
Sbjct: 347 NDSVRSVVFSHDSR-LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRL- 404
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
S D +K+W+ + L GH D + +V F + + SASDD+T++IW+ + +
Sbjct: 405 ASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGS 464
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN 185
L GHN +V F L+ SAS D TV++WD + + + D+ +R +
Sbjct: 465 LQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFS 524
Query: 186 TD--LFGGV--DAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
D L D VK LEGHD VN +F P L+ S +DD VK+W
Sbjct: 525 HDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Query: 232 RMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
T + T G + F +++ S +D ++++WD+ + TF +H+
Sbjct: 585 YA-ATGTVQ-HTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHE 642
Score = 178 (67.7 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 63/253 (24%), Positives = 102/253 (40%)
Query: 71 DDYKIKVWNYKMHRC----------LFT---LLGHLDYIRTVQFHHEYPWIVSASDDQTI 117
D Y+ +WN +C LF+ GH + +V F H+ + SAS D T+
Sbjct: 228 DSYRFALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTV 287
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADD 177
+IW+ + + L GHN +V F L+ SAS D TV++WD
Sbjct: 288 KIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTAT----------- 336
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
++ +L+GH+ V F LI SG++DR V++W T
Sbjct: 337 ----------------GTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET--TT 378
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
T H ++V V F + S S+ ++++WD + D ++
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVS 438
Query: 298 SHPEMNLLAAGHD 310
P+ LLA+ D
Sbjct: 439 FSPDSRLLASASD 451
Score = 135 (52.6 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 6 ETKSNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
E+ N V+ + F H R +LAS + +++WD G+L + + HD V V F
Sbjct: 512 ESHDNWVRSVVFSHDSR--LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDS 569
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L S DD +K+W T G ++ F H + SA DD T++IW+ +
Sbjct: 570 RLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDME 629
Score = 55 (24.4 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 743 DVKERV----KILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPE--GKA--PS 794
DVKER+ ++ E P Y T +HG +++ + + + D +P+ GK+ PS
Sbjct: 1116 DVKERLIQVQRLFEGLSRSPELY-TNPIHGSENIDNQFSCAIIDFASGIPQRHGKSREPS 1174
Query: 795 L 795
+
Sbjct: 1175 I 1175
Score = 40 (19.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 26/112 (23%), Positives = 43/112 (38%)
Query: 560 SGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYIFKLSLLRKRYDHVMSMIRN 619
S + + LD P Y G I DRD + ++ +SLL R +++
Sbjct: 1006 STLPKELDDPRYPRLRGGADIMVKDRDQRTPLHHAAKEGHLLSVSLLLSRG----ALVDI 1061
Query: 620 SQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEID 671
+ GQ + G E A + E F ++G I+V +E+D
Sbjct: 1062 PDINGQTPLYLAAINGRLEAAQKLLS-EGANFRTTDQAGRA-ISVKLKEELD 1111
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 297 (109.6 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 156 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 207
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 208 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 265
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 266 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 317
Score = 285 (105.4 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 85 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 142
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 143 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 202
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 203 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 254
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 255 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 312
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 313 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 130 (50.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 137
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 138 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 180
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 296 (109.3 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 84/294 (28%), Positives = 134/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVEDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 295 (108.9 bits), Expect = 5.6e-24, P = 5.6e-24
Identities = 83/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNA-HEHF 382
Score = 279 (103.3 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 77/271 (28%), Positives = 131/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF H+ + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHTGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ S + T G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY--STISEAT------GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
+ + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F T L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS S DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 294 (108.6 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 83/294 (28%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S L S D IK+W+++ C+ T+ GH + +V IVSA+ D+TI++W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
Q+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + Y G P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPES-SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHF 382
Score = 285 (105.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/271 (28%), Positives = 132/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F + L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
D IVS + DK+I++W+V V+TF H R W+ P +
Sbjct: 203 NGDHIVSAARDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQD 245
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 309 (113.8 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 90/312 (28%), Positives = 143/312 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + F +++ + +++WD G L+ D H G V + F L SG
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D I +W+ L T GH I +V F + + SASDD TI+IW+ + L
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTL 872
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGALRK---------KTVSPADDILR 180
H+ V +F P L+ S+SLD T++VW+ G L++ K+V+ + D +
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 181 L---SQMNT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
L S+ NT L+ + LEGH + V AF P + S + D +KLW N T
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW--NST 990
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR-FWI 295
T +GH + V F +VS S+D +I++WD+ + +Q +H R
Sbjct: 991 TGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLAT-SELQQSLEDHSRSVHA 1049
Query: 296 LASHPEMNLLAA 307
+A P+ LA+
Sbjct: 1050 VAFSPDDKQLAS 1061
Score = 299 (110.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 88/320 (27%), Positives = 142/320 (44%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E +S VK ++F + + ++LW+ G L+ + H VR V F
Sbjct: 915 EGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ 974
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
S D IK+WN T GH +IR V F + +VS SDD TI++W+ +
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGAL-----------RKKTV 172
L H+ V +F P + + S+SLD T+++WD G L R T
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF 1094
Query: 173 SPADDILRLSQMN--TDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L + + L+ + ++ L G V+ AF P + SG D +KL
Sbjct: 1095 SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKL 1154
Query: 231 WRMNETKAWEV-DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRRE 289
W ++ E+ TL GH + + V+F ++ S S D++ ++WD +Q F
Sbjct: 1155 W---DSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEG- 1210
Query: 290 HDRFWI--LASHPEMNLLAA 307
H + W+ +A P+ LLA+
Sbjct: 1211 HSK-WVESVAFSPDGKLLAS 1229
Score = 299 (110.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 86/318 (27%), Positives = 141/318 (44%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
++ S V+ ++F + +S I++W+ G L + G V+ V F
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
SG + +K+WN L TL GH +R+V F + + S+S D TI++WN +
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG 992
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA--LRK------KTV----- 172
GH+ ++ +F P +VS S D T+++WD+ L++ ++V
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAF 1052
Query: 173 SPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP D L S +++ L+ ++ LEGH +GV F P L+ S + D +KL
Sbjct: 1053 SPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKL 1112
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W N TL G + V V F + S D +I++WD +QT
Sbjct: 1113 W--NPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHS 1170
Query: 291 DRFWILASHPEMNLLAAG 308
DR + P+ LLA+G
Sbjct: 1171 DRIQSVVFSPDGKLLASG 1188
Score = 287 (106.1 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 86/300 (28%), Positives = 131/300 (43%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
V Q W TL + H GPV V F VSG D +K+W+ L TL G
Sbjct: 735 VEQTWSAEQQTL----ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H + ++ F + + S S D TI +W+ + + GH H + +F P +
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 152 SASLDQTVRVWDIG-------------ALRKKTVSPADDILRLSQMNTDL--FGGVDAVV 196
SAS D T+++WD+ ++R SP +L S +++ + + +
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+ LEG V AF P + SG++ VKLW N + TL GH +V V F
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLW--NPATGELLQTLEGHSQSVRSVAF 968
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI--LASHPEMNLLAAGHDSGMI 314
+ S+S D +I++W+ T QTF+ HD WI +A P+ L +G D I
Sbjct: 969 SPDGKQLASSSSDTTIKLWNSTTGELQQTFKG-HD-LWIRAVAFSPDGKHLVSGSDDNTI 1026
Score = 285 (105.4 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 90/331 (27%), Positives = 146/331 (44%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L FE + + ++F + ++ I++WD G L D H VR V F
Sbjct: 826 LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFS 885
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
L S D IKVWN +L G ++++V F + + S S+ T+++W
Sbjct: 886 PDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLW 945
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDI 178
N + + L GH+ V +F P + S+S D T+++W+ G L++ T D
Sbjct: 946 NPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQ-TFKGHDLW 1004
Query: 179 LRLSQMNTD---LFGGVD-----------AVVKYVLEGHDRGVNWAAFHPTLPLIVSGAD 224
+R + D L G D + ++ LE H R V+ AF P + S +
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 225 DRQVKLWRMNETKAWEVD-TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGV 283
D +KLW ++ E+ TL GH V V F ++ SNS D +I++W+
Sbjct: 1065 DSTIKLW---DSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ 1121
Query: 284 QTFRREHDRFWI--LASHPEMNLLAAGH-DS 311
QT D W+ +A P+ LA+G+ DS
Sbjct: 1122 QTLTGRSD--WVDSVAFSPDGKQLASGYYDS 1150
Score = 280 (103.6 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 83/329 (25%), Positives = 142/329 (43%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L + S V+ L+F + + + I LWD G L+ F+ H + V F
Sbjct: 784 LLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFA 843
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
S DD IK+W+ TL H +R+V F + + S+S D TI++W
Sbjct: 844 PDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGALRK--------- 169
N + L G + +V +F P + S S TV++W+ G L +
Sbjct: 904 NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSV 963
Query: 170 KTVSPADDILRLSQMNTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADD 225
++V+ + D +L+ ++D L+ ++ +GHD + AF P +VSG+DD
Sbjct: 964 RSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDD 1023
Query: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
+KLW + ++ + +L H +V V F + S+S D +I++WD +T
Sbjct: 1024 NTIKLWDLATSELQQ--SLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRT 1081
Query: 286 FRREHDRFWILASHPEMNLLAAGHDSGMI 314
+ P+ LLA+ G I
Sbjct: 1082 LEGHSQGVRSVTFSPDGKLLASNSYDGTI 1110
Score = 279 (103.3 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 86/322 (26%), Positives = 138/322 (42%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L E S V+ ++F + +S I+LW+ G L F HD +R V F
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFS 1011
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
VSG DD IK+W+ +L H + V F + + S+S D TI++W
Sbjct: 1012 PDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGALRKKTVSPAD-- 176
+ + L GH+ V +F P L+ S S D T+++W+ G L++ +D
Sbjct: 1072 DSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV 1131
Query: 177 DILRLSQMNTDLFGGV-DAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADD 225
D + S L G D+ +K LEGH + F P L+ SG+ D
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYD 1191
Query: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
+ KLW + ++ GH V V F ++ S+S ++I++WD +QT
Sbjct: 1192 QTAKLWDPATGELLQI--FEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQT 1249
Query: 286 FRREHDRFWILASHPEMNLLAA 307
+ +A P+ N LA+
Sbjct: 1250 LNDPDESAGSVAFSPDGNRLAS 1271
Score = 186 (70.5 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 81/326 (24%), Positives = 122/326 (37%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E S V ++F + +S I+LWD G L + H VR V F L
Sbjct: 1041 EDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKL 1100
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
S D IK+WN TL G D++ +V F + + S D TI++W+ +
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG 1160
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGAL------RKKTV----- 172
+ L GH+ + F P L+ S S DQT ++WD G L K V
Sbjct: 1161 ELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAF 1220
Query: 173 SPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L S L+ V + L D AF P + S D K+
Sbjct: 1221 SPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLAS-VDIFDTKI 1279
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W + + L+GH V ++ +S D+ W + + + +
Sbjct: 1280 W--DPATGELLQALKGHSKWV-----WSRTGAGISIFLDQ----WLCLQEKRILWLPQSY 1328
Query: 291 DRFWILASHPEMNLLAAGHDSGMIVF 316
F I + +L GH SG + F
Sbjct: 1329 QPFCISVND---GVLVLGHSSGRVSF 1351
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 236 (88.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 65/226 (28%), Positives = 105/226 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDD-----YKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHE 104
H+ V V F L S D Y I N + + GH + I V F +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 105 YPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
+IVSASDD+T+++W+ ++ + I L GH +Y C +F+P+ +++VS S D+TVR+WD+
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDV 142
Query: 165 GALRKKTVSPA-DDILRLSQMNTD--LF-------------GGVDAVVKYVLEGHDRGVN 208
+ V PA D + N D L G VK +++ + V+
Sbjct: 143 TTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVS 202
Query: 209 WAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ F P I+ G D ++LW ++ K + T GH+N C+
Sbjct: 203 FVRFSPNGKFILVGTLDNTLRLWNISSAKF--LKTYTGHVNAQYCI 246
Score = 205 (77.2 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 41/122 (33%), Positives = 63/122 (51%)
Query: 44 IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH 103
+ F H+ + V F VS DD +K+W+ + + TL+GH +Y V F+
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 104 EYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ IVS S D+T+RIW+ + C+ VL H+ V F+ L+VS+S D R+WD
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Query: 164 IG 165
G
Sbjct: 184 SG 185
Score = 205 (77.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F N + ++F S +I+++ ++LWD G+LI H V+F+
Sbjct: 66 EFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS 125
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
+ VSG D +++W+ +CL L H D + V F+ + IVS+S D RIW+
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 124 SRTCISVLTG-HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
+ C+ L N V F P ++ +LD T+R+W+I + +
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFH-HEYPWIVSASDDQTIRIWNWQS 124
G D +++WN + L T GH++ Y + F IVS S+D + +W S
Sbjct: 215 VGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNS 274
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ + L GH VM + HP E+L+ S SLD+TVR+W
Sbjct: 275 KKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 166 (63.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/104 (37%), Positives = 61/104 (58%)
Query: 175 ADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
AD +R +NT + V ++ GH+ G++ AF IVS +DD+ +KLW +
Sbjct: 44 ADKTIRTYTINTINDPIAEPVQEFT--GHENGISDVAFSSDARFIVSASDDKTLKLWDV- 100
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
ET + + TL GH N CV F+ + ++IVS S D+++R+WDVT
Sbjct: 101 ETGSL-IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143
Score = 158 (60.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 45/192 (23%), Positives = 88/192 (45%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
++F+ + I++ +++WD G + H PV V F++ L VS D
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 75 IKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTG 133
++W+ C+ TL+ + + V+F +I+ + D T+R+WN S + TG
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTG 238
Query: 134 H-N-HYVMCASFHPKEDL-VVSASLDQTVRVWDIGA--LRKKTVSPADDILRLSQMNTDL 188
H N Y + ++F +VS S D V +W++ + L +K + ++ ++ T+
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN 298
Query: 189 F---GGVDAVVK 197
G +D V+
Sbjct: 299 LIASGSLDKTVR 310
Score = 131 (51.2 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 191 GVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN 250
G VK +++ + V++ F P I+ G D ++LW ++ K + T GH+N
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF--LKTYTGHVNA 242
Query: 251 VSCVM--FHAKQDI-IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
C+ F IVS SED + +W++ + +Q + +A HP NL+A+
Sbjct: 243 QYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIAS 302
Query: 308 GH-DSGMIVFKLERE 321
G D + ++ ++E
Sbjct: 303 GSLDKTVRIWTQKKE 317
Score = 126 (49.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSCVMF 256
L H+R V+ F L+ S + D+ ++ + +N A V GH N +S V F
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ IVS S+DK++++WDV + ++T + + + +P+ N++ +G
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131
Score = 101 (40.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW-----NWQSRTCISVLTGHNHYVMCAS 142
TL H + +V+F + + SAS D+TIR + N + TGH + + +
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 143 FHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNTDLFGGVDAVVK 197
F +VSAS D+T+++WD+ G+L K + + ++ Q N + G D V+
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Score = 73 (30.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFG 190
LT HN V F L+ SAS D+T+R + I + P + +D+
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 191 GVDAVVKYVLEGHD 204
DA ++++ D
Sbjct: 80 SSDA--RFIVSASD 91
Score = 45 (20.9 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 698 RTKNFERLSFLYLITGNMDK---LSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESA 754
R N FL TG+++ +S + K V G N +++ ++ + + +
Sbjct: 223 RLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE 282
Query: 755 GH 756
GH
Sbjct: 283 GH 284
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 289 (106.8 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 80/294 (27%), Positives = 136/294 (46%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH ++++ I++WDY G H V+ + F +
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ L S D IK+W+++ C+ T+ GH + +V IVSAS D+T+++W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
+ C+ TGH +V P +D L+ S S DQTVRVW + K A+ L
Sbjct: 221 VATGYCVKTFTGHREWVRMV--RPNQDGTLLASCSNDQTVRVWVVATKECK----AE--L 272
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
R + + + N + P P ++SG+ D+ +K+W ++
Sbjct: 273 REHEHVVECISWAPESAHPTISEATGSENKKSGKPG-PFLLSGSRDKTIKMWDISTGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+FH +VS ++DK++R+WD + ++T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSA-HEHF 382
Score = 277 (102.6 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 73/270 (27%), Positives = 128/270 (47%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
++ V+ +SF +LAS + + I+LWD++ I HD V V + V
Sbjct: 150 TDSVQDISFDQTGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
S D +K+W C+ T GH +++R V+ + + + S S+DQT+R+W ++ C
Sbjct: 209 SASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKEC 268
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ L H H V C S+ P+ ++ + G+ KK+ P +L S+ T
Sbjct: 269 KAELREHEHVVECISWAPES---AHPTISEAT-----GSENKKSGKPGPFLLSGSRDKTI 320
Query: 188 LFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+ + L GHD V FHP +VS ADD+ +++W + + TL
Sbjct: 321 KMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMK--TLSA 378
Query: 247 HMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 379 HEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
L+GH V +F T L+ S + D +KLW + + +E + T+ GH +NVS V
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLW---DFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN--LLAA 307
D IVS S DK++++W+V V+TF H R W+ P + LLA+
Sbjct: 203 NGDHIVSASRDKTMKMWEVATGYCVKTFTG-H-REWVRMVRPNQDGTLLAS 251
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 242 (90.2 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 77
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 78 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 137
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 138 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 197
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 198 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 236
Score = 216 (81.1 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 81
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 82 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 141
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 142 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Score = 215 (80.7 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 145 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 204
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN Q+
Sbjct: 205 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 264
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 265 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 203 (76.5 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 52 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 111
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 171
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 172 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 186 (70.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 103 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 162
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 163 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 222
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 223 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Score = 170 (64.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 72
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 73 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 189
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 190 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 239
Score = 154 (59.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 68
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 121
Score = 110 (43.8 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 237
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 238 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 292
Score = 65 (27.9 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 271 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 305
Score = 40 (19.1 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 249 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALE 296
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 290 (107.1 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 77/292 (26%), Positives = 134/292 (45%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
N + + FH ++++ I++WD+ G H V+ + F K+ L S
Sbjct: 107 NCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASC 166
Query: 70 GDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129
D IK+W+++ + C+ TL GH + V+F ++S+S D+TI++W + CI
Sbjct: 167 SADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIK 226
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRK--KTVSPADDILRLSQMN 185
L GH +V + + S S DQT++ W+I G + S + L S N
Sbjct: 227 TLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN 286
Query: 186 T-DLFGGVDAVVK---YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
D+ G + + + V +G G N + +G+ D+ +K+W + + +
Sbjct: 287 IIDIPGSLLSTPEGKSKVKQGP--GGNLVG---QCGYLATGSRDKTIKIWELATGRC--L 339
Query: 242 DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
T GH N V V FH ++S +DK+IRVWD+ + ++T H F
Sbjct: 340 ATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHF 391
Score = 259 (96.2 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 77/279 (27%), Positives = 124/279 (44%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
+N V+ + F K +LAS + + I+LWD++ + HD V V F S +
Sbjct: 148 TNAVQDIDF-DKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLI 206
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
S D IKVW C+ TL+GH D++R + + I S S+DQTI+ WN C
Sbjct: 207 SSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGEC 266
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
++ H+H V C +F + + SL T G + K P +++ Q
Sbjct: 267 LATYREHSHVVECLAFSTANIIDIPGSLLSTPE----GKSKVKQ-GPGGNLV--GQCGYL 319
Query: 188 LFGGVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
G D +K + L GHD V FHP ++S DD+ +++W + + +
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGR 379
Query: 238 AWEVDTLR-GHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+ T+ H + +SC+ F I + D I+VW
Sbjct: 380 C--IKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 224 (83.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H + V FH S L VS +D IKVW+++ TL GH + ++ + F +
Sbjct: 105 HRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLA 164
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-LR 168
S S D TI++W++Q+ C+ L GH+H V C F P D ++S+S D+T++VW+
Sbjct: 165 SCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYC 224
Query: 169 KKTVSPADDILRLSQMNTD 187
KT+ +D +R ++ D
Sbjct: 225 IKTLVGHEDWVRKITVSED 243
Score = 183 (69.5 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G D IK+W RCL T +GH +++R V+FH +++S DD+TIR+W+ C
Sbjct: 321 TGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRC 380
Query: 128 ISVLT-GHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
I + H H++ C F + + +D ++VW +
Sbjct: 381 IKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 174 (66.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNT- 186
+LTGH + + FHP L+VSAS D T++VWD G + + + + T
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 187 DLFGG--VDAVVK------Y----VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+L D +K Y L GHD V+ F P+ ++S + D+ +K+W
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEA- 219
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
+ + TL GH + V + I S S D++I+ W++ K + T+R EH
Sbjct: 220 -ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR-EH 273
Score = 168 (64.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L GH + I +V+FH + +VSAS+D TI++W+++S L GH + V F +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 149 LVVSASLDQTVRVWDIGALR-KKTVSPAD---DILRLSQMNTDLFGGV-DAVVK------ 197
L+ S S D T+++WD KT+ D +R + L D +K
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 198 -YVLE---GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
Y ++ GH+ V I S ++D+ +K W N K + T R H + V C
Sbjct: 222 GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW--NIVKGECLATYREHSHVVEC 279
Query: 254 VMFHAKQDIIVSNS 267
+ F I + S
Sbjct: 280 LAFSTANIIDIPGS 293
Score = 147 (56.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
K++L GH +N FHP+ L+VS ++D +K+W E+ +E TL+GH N V + F
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDF-ESGEFE-RTLKGHTNAVQDIDF 156
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
+++ S S D +I++WD V+T HD
Sbjct: 157 DKTGNLLASCSADLTIKLWDFQTYDCVKTLHG-HD 190
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL-G 91
I++W+ G + + HD VR V FH +S GDD I+VW+ RC+ T+
Sbjct: 328 IKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEA 387
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
H +I + F P I + D I++W Q
Sbjct: 388 HTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 47 (21.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+K + E H ++ F P I +G D +K+W++
Sbjct: 381 IKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 40 (19.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 709 YLITGNMDKLSKMLKIA 725
YL TG+ DK K+ ++A
Sbjct: 318 YLATGSRDKTIKIWELA 334
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 276 (102.2 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 68/246 (27%), Positives = 111/246 (45%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 87 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 146
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
FV+ DD IKVW+ + LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR C+ H +V FHP V +A +D TV+VWD+ A+
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 266
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 267 SFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 326
Query: 229 KLWRMN 234
+W+ N
Sbjct: 327 MVWKSN 332
Score = 239 (89.2 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 76/278 (27%), Positives = 130/278 (46%)
Query: 16 SFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKI 75
SF+ K+ + + + +W + + RF H V V+F S L SG D +
Sbjct: 59 SFNMKQ--LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTV 116
Query: 76 KVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTG 133
++W N K +F H +R+V F + V+ASDD+TI++W+ + + L+
Sbjct: 117 RIWVPNIKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQ 174
Query: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFG--- 190
H ++V CA F P L+VSAS D+TV++WD + R+ S + ++ ++ G
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS-RECVHSYCEHGGFVTYVDFHPSGTCV 233
Query: 191 ---GVDAVVKY-------VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
G+D VK +L+ H VN +FHP+ +V+ + D +K+ + E +
Sbjct: 234 AAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGR 293
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+ TL GH + V F + S D+ + VW
Sbjct: 294 L--LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 222 (83.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 72/256 (28%), Positives = 111/256 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + V F + S S D + +W+ + ++ TGH V C +F P L+
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD----LFGGVDAVVKYVLEGH-- 203
S S D+TVR+W + TV A +R +D + D +K V H
Sbjct: 108 ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK-VWSTHRQ 166
Query: 204 ------DRGVNW---AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ +NW A F P LIVS +DD+ VKLW ++T V + H V+ V
Sbjct: 167 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYV 224
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGM 313
FH + + D +++VWDV +Q ++ L+ HP N L+ A DS +
Sbjct: 225 DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 284
Query: 314 IVFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 285 KILDLMEGRLLYTLHG 300
Score = 176 (67.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 39/162 (24%), Positives = 72/162 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S + + I++W + +H VR F
Sbjct: 128 TVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPD 187
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH + +A D T+++W+
Sbjct: 188 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 247
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +V+AS D T+++ D+
Sbjct: 248 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 289
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 709 YLITGNMDKLSKMLKIAE 726
YL+T + D K+L + E
Sbjct: 274 YLVTASSDSTLKILDLME 291
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 210 (79.0 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 2 LTKFETKSN--RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
+ K+ K + + + F W+ ++ I++W G + H + + +
Sbjct: 37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW 96
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L S DD IK+W+ + + + TL GH +Y+ V F+ + IVS S D+ +RI
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPAD 176
W+ + C +++ H+ V F+ LVVS S D TVR+WD G L T+S D
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLN-TISTED 214
Score = 207 (77.9 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 47/161 (29%), Positives = 84/161 (52%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGP-VRGVHFHKSQPLFV 67
S+ V G+ F+ +++ + G +++WD G L++ DG V V F + +
Sbjct: 172 SDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVL 231
Query: 68 SGGDDYKIKVWNYKMHR-CLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQ 123
+G D +++W+Y ++ CL T GH + Y F WIV+ S+D I I+N Q
Sbjct: 232 AGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQ 291
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+R + L GH V+ + HP E+++ S +L D++V++W
Sbjct: 292 TREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 186 (70.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T +G+S + I ++ I++WD G ++ H V GV F
Sbjct: 79 KFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSF 138
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ C + H D + V F+ + +VS S D T+RI
Sbjct: 139 NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Query: 120 WNWQSRTCISVL-TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
W+ + ++ + T V F P V++ +LD T+R+W +K
Sbjct: 199 WDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKK 249
Score = 185 (70.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 62/257 (24%), Positives = 119/257 (46%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+TL GHL I +V+F + W+ SAS D+TI+IW L GH + ++
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 147 EDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNTDLFGGVDAVVKY--- 198
L+ SAS D+T+++WD+ G + K + + +S Q N + G D V+
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN- 250
++ H V F+ L+VSG+ D V++W + T ++T+
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW--DTTTGQLLNTISTEDGKE 217
Query: 251 VSCVMFHAKQDIIVSNSEDKSIRVWDVTK-RTGVQTFR-REHDRFWILASHPEM--NLLA 306
VS V F +++ + D ++R+W + ++T+ +++++ I ++ +
Sbjct: 218 VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIV 277
Query: 307 AGHDSGMI-VFKLE-RE 321
G + +I ++ L+ RE
Sbjct: 278 TGSEDNLIYIYNLQTRE 294
Score = 162 (62.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 33/114 (28%), Positives = 64/114 (56%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
++KY L+GH + ++ F P + S + D+ +K+W + K +E TL GH +S +
Sbjct: 37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGK-FE-RTLEGHKEGISDI 94
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ +I S S+DK+I++WDV V+T + + + ++ +P+ NL+ +G
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSG 148
Score = 123 (48.4 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM--FHAK-QDII 263
V++ F P +++G D ++LW N K + T GH N C+ F I
Sbjct: 218 VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC-LKTYTGHKNEKYCIFSTFSVTCGKWI 276
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
V+ SED I ++++ R VQT D +A HP N++A+G
Sbjct: 277 VTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Score = 83 (34.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS--EDKSIRVW 275
IV+G++D + ++ + + V TL GH + V V H ++II S + +D+S+++W
Sbjct: 276 IVTGSEDNLIYIYNLQTREI--VQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 73 (30.8 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L GH+ V A HPT +I SGA DR VK+W+
Sbjct: 299 LAGHEDVVLTVACHPTENIIASGALEKDRSVKIWK 333
Score = 43 (20.2 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ R + AGH + +T + H +++ A E
Sbjct: 277 VTGSEDNLIYIYNLQTREIVQTLAGHEDVV-LTVACHPTENIIASGALE 324
Score = 37 (18.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 519 KLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCL 555
K V TL T+R+ S + + YT + KYC+
Sbjct: 228 KFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI 264
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 67/246 (27%), Positives = 110/246 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L V+ DD +KVW+ R LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR C+ H +V FHP + +A +D TV+VWD A+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNAL 235
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 236 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 229 KLWRMN 234
+W+ N
Sbjct: 296 MVWKSN 301
Score = 241 (89.9 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 74/289 (25%), Positives = 132/289 (45%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ + V + F + + + +W + + RF H V V+F S
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 65 LFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L SG D +++W N K +F H +R+V F + +V+ASDD+T+++W+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLS 182
+ + LT H ++V CA F P L+VSAS D+TV++WD + R+ S + ++
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS-RECVHSYCEHGGFVT 191
Query: 183 QMNTDLFG------GVDAVVKY-------VLEG---HDRGVNWAAFHPTLPLIVSGADDR 226
++ G G+D VK +++ H VN +FHP+ +++ + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+K+ + E + + TL GH + V F + S D+ + VW
Sbjct: 252 TLKILDLMEGRL--LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 228 (85.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 76/256 (29%), Positives = 111/256 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + V F + S S D T+ IW+ + ++ TGH V C +F P L+
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD----LFGGVDAVVKYVLEGH-- 203
S S D+TVR+W + TV A +R +D + D VK V H
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK-VWSTHRQ 135
Query: 204 ------DRGVNW---AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ +NW A F P LIVS +DD+ VKLW ++T V + H V+ V
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYV 193
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGM 313
FH I + D +++VWD VQ ++ L+ HP N L+ A DS +
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Query: 314 IVFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 254 KILDLMEGRLLYTLHG 269
Score = 179 (68.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S ++ + +++W + +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDT 216
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +++AS D T+++ D+
Sbjct: 217 RTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 709 YLITGNMDKLSKMLKIAE 726
YLIT + D K+L + E
Sbjct: 243 YLITASSDSTLKILDLME 260
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 285 (105.4 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/292 (26%), Positives = 135/292 (46%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
KF +R + + FH ++++ I++WD+ G H V+ V F
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Query: 62 SQPLFVSGGDDYKIKVWNYKM-HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
L S D IK+W+++ + C+ T+ GH + +V F +++SAS D+TI++W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
+ C+ TGH +V H + + + S DQT+RVW + K LR
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE------LR 274
Query: 181 LSQMNTDLFGGV-DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
+ + +A + E G + H P + SG+ D+ +++W ++
Sbjct: 275 DHEHTVECIAWAPEAAASAINEA--AGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLC- 331
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT-FRREH 290
+ TL GH N V + FH +VS S+DK+IRVWD+ + ++T + +H
Sbjct: 332 -LLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQH 382
Score = 283 (104.7 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 74/271 (27%), Positives = 130/271 (47%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGV-IQLWDYRMG-TLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ ++F ++ +LAS + + I+LWD++ I HD V V F +
Sbjct: 150 TDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+S D IK+W C+ T GH +++R V+ H E + S+DQTIR+W S+
Sbjct: 209 LSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C L H H V C ++ P+ ++++++ GA KK + S+ T
Sbjct: 269 CKVELRDHEHTVECIAWAPE---AAASAINEAA-----GADNKKGHHQGPFLASGSRDKT 320
Query: 187 DLFGGVDA-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V AFHP +VS +DD+ +++W + + + TL
Sbjct: 321 IRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK--TLY 378
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + + + FH ++S S D++++VW+
Sbjct: 379 AHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 243 (90.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 77/284 (27%), Positives = 137/284 (48%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H + V FH L VS +D I++W+++ +L GH D ++ V F + +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLA 166
Query: 110 SASDDQTIRIWNWQ-SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-L 167
S S D +I++W++Q S CI + GH+H V +F P D V+SAS D+T+++W++
Sbjct: 167 SCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGY 226
Query: 168 RKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQ 227
KT + + +R+ +++ + G + A +D+ T+ + ++ + D +
Sbjct: 227 CVKTYTGHREWVRMVRVHIE--GSIFATCS-----NDQ---------TIRVWLTNSKDCK 270
Query: 228 VKLWRMNETK---AWEVDTLRGHMNNVSCV---MFHAKQDIIVSNSEDKSIRVWDVTKRT 281
V+L T AW + +N + H + + S S DK+IR+WDV+
Sbjct: 271 VELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGL 330
Query: 282 GVQTFRREHDRFWI--LASHPEMN-LLAAGHDSGMIVFKLERER 322
+ T HD W+ LA HP L++A D + V+ L +R
Sbjct: 331 CLLTLSG-HDN-WVRGLAFHPGGKYLVSASDDKTIRVWDLRNKR 372
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 189 (71.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 58/206 (28%), Positives = 93/206 (45%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT----CISVLTGHNHYVMCASFH 144
L GH D + T+ + W+ + + D T+R+WN CI V TGH V +
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 145 PKE-----DLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYV 199
P + + S+S D+T++ +++G SQ+N F AV +
Sbjct: 420 PLDVNGYPTFLASSSQDRTLKRFNLG----------------SQLNKSDFSN-RAV--WT 460
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
++ HDR VN +I S + D+ +KLW + + V LRGH V F+
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEV--VGVLRGHRRGVWACSFNPF 518
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQT 285
+ S S D++IR+W+V + VQT
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQT 544
Score = 183 (69.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V L+ S ++A+ S ++ +++ G I H+ PV + + L +GG
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQF-HHEYPWIV-SASDDQTIRIWNWQSRTCIS 129
+ +KVW+ + GH I + F H+ W++ S +DD +R+W+ S ++
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
V GH+ + +F P ++S S D+TV+VW+I
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Score = 167 (63.8 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 40/121 (33%), Positives = 68/121 (56%)
Query: 199 VLEGHDRGVNWA-AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
VL GH RGV WA +F+P + SG+ DR +++W ++ + V TL GH + +++
Sbjct: 502 VLRGHRRGV-WACSFNPFSRQLASGSGDRTIRIWNVDTQQC--VQTLEGHTGAILKLIYI 558
Query: 258 AKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVF 316
++ +VS + D ++VW ++ V T DR W LAS + +LL +G D+ + V+
Sbjct: 559 SQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Query: 317 K 317
K
Sbjct: 619 K 619
Score = 167 (63.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/145 (28%), Positives = 64/145 (44%)
Query: 19 SKRPWILASLHSG-VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKV 77
SK I+AS I+LWD G ++ H V F+ SG D I++
Sbjct: 474 SKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRI 533
Query: 78 WNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHY 137
WN +C+ TL GH I + + + +VSA+ D +++W+ S C++ L H
Sbjct: 534 WNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDR 593
Query: 138 VMCASFHPKEDLVVSASLDQTVRVW 162
V + L+VS D V VW
Sbjct: 594 VWALASRFDGSLLVSGGADAVVSVW 618
Score = 162 (62.1 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 45/152 (29%), Positives = 70/152 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
HD V + K + S D IK+W+ + L GH + F+ +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLA 523
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
S S D+TIRIWN ++ C+ L GH ++ + + VVSA+ D V+VW + +
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGEC 583
Query: 169 KKTVSPADD-ILRL-SQMNTDLF--GGVDAVV 196
T+ +D + L S+ + L GG DAVV
Sbjct: 584 VATLDNHEDRVWALASRFDGSLLVSGGADAVV 615
Score = 160 (61.4 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 34/137 (24%), Positives = 68/137 (49%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV--SGGDDYKIKVWNYKMHRCLFT 88
G++++WD + F H G + + F K Q +V SG DD ++++W+ R +
Sbjct: 125 GLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAV 184
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL-TGHN-HYVMCASFHPK 146
GH IR + F +++S S D+T+++WN + R+ + + H+ + + P+
Sbjct: 185 FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPE 244
Query: 147 EDLVVSASLDQTVRVWD 163
E ++ +A + WD
Sbjct: 245 EKILYTAGEGNLILAWD 261
Score = 148 (57.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
+R ++T+ H + +Q + I SAS D+TI++W+ + + VL GH V S
Sbjct: 455 NRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACS 514
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP-ADDILRL---SQMNTDLFGGVDAVVK 197
F+P + S S D+T+R+W++ + +T+ IL+L SQ + D +VK
Sbjct: 515 FNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVK 574
Query: 198 Y----------VLEGHDRGVNWA-AFHPTLPLIVSGADDRQVKLWR 232
L+ H+ V WA A L+VSG D V +W+
Sbjct: 575 VWSLSSGECVATLDNHEDRV-WALASRFDGSLLVSGGADAVVSVWK 619
Score = 132 (51.5 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 48/200 (24%), Positives = 86/200 (43%)
Query: 12 VKGLSFHS-KRPWILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
+ L F + W+LAS ++LWD + F+ H +RG+ F + +SG
Sbjct: 148 ISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSG 207
Query: 70 GDDYKIKVWNYKMHRCLFTL-LGH-LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++VWN K + T+ + H ++ I V E + +A + I W+W+S +
Sbjct: 208 SRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSR 267
Query: 128 IS--VLTGHNHYVMCASFHP-KEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM 184
+ V T H+ P E+ ++S D ++ LRK+ P + + + ++
Sbjct: 268 LDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSL------LLRKRV--PGEGFITIKKL 319
Query: 185 NTDLFGGVDAVVKYVLEGHD 204
N G D V+ G D
Sbjct: 320 N----GSFDEVIDCAWIGDD 335
Score = 65 (27.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
DY+ + + +++A + + I+ S I + H V+ + P L+ +
Sbjct: 62 DYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATG 121
Query: 154 SLDQTVRVWDI-GA 166
+ V+VWDI GA
Sbjct: 122 GAEGLVKVWDIAGA 135
Score = 64 (27.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 16/80 (20%), Positives = 36/80 (45%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
FE S+ ++GL+F ++L+ +Q+W+ + + + V + + QP
Sbjct: 185 FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQP 243
Query: 65 ---LFVSGGDDYKIKVWNYK 81
+ + G+ I W++K
Sbjct: 244 EEKILYTAGEGNLILAWDWK 263
Score = 62 (26.9 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 117 IRIWNWQSRTCISVLTGHNHYV--MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
+++W+ GH + +C H ++ S + D VR+WD+ + R V
Sbjct: 127 VKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAV 184
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 271 (100.5 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 66/246 (26%), Positives = 110/246 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 18 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
FV+ DD +KVW + LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR C+ H +V FHP + +A +D TV+VWD+ A+
Sbjct: 138 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 197
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 198 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 257
Query: 229 KLWRMN 234
+W+ N
Sbjct: 258 MVWKSN 263
Score = 235 (87.8 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 71/261 (27%), Positives = 122/261 (46%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVW--NYKMHRCLFTLL 90
+ +W + + RF H V V+F S L SG D +++W N K +F
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFR-- 62
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
H +R+V F + V+ASDD+T+++W + + L+ H ++V CA F P L+
Sbjct: 63 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 122
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFG------GVDAVVKY------ 198
VSAS D+TV++WD + R+ S + ++ ++ G G+D VK
Sbjct: 123 VSASDDKTVKLWDKSS-RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
Query: 199 -VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+L+ H VN +FHP+ +++ + D +K+ + E + + TL GH + V
Sbjct: 182 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL--LYTLHGHQGPATTV 239
Query: 255 MFHAKQDIIVSNSEDKSIRVW 275
F + S D+ + VW
Sbjct: 240 AFSRTGEYFASGGSDEQVMVW 260
Score = 171 (65.3 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 38/162 (23%), Positives = 72/162 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S + + +++W + +H VR F
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 118
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH I +A D T+++W+
Sbjct: 119 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +++AS D T+++ D+
Sbjct: 179 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 220
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 62/264 (23%), Positives = 110/264 (41%)
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D + VW+ K + GH D + V F + S S D+T+RIW + +V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK---TVSPADDILRLSQMNTD- 187
H V F V+AS D+TV+VW R+K ++S + +R ++ + D
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVW--ATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 188 ---LFGGVDAVVKYVLEG-----H---DRG--VNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+ D VK + H + G V + FHP+ I + D VK+W +
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
+ + L H V+ + FH + +++ S D ++++ D+ + + T
Sbjct: 180 THRLLQHYQL--HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT 237
Query: 295 ILA-SHPEMNLLAAGHDSGMIVFK 317
+A S + G D ++V+K
Sbjct: 238 TVAFSRTGEYFASGGSDEQVMVWK 261
Score = 38 (18.4 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 709 YLITGNMDKLSKMLKIAE 726
YLIT + D K+L + E
Sbjct: 205 YLITASSDSTLKILDLME 222
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 292 (107.8 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 77/258 (29%), Positives = 121/258 (46%)
Query: 44 IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH 103
+ + H+ V V + L S DD +K+W+ + TL GH D +R+V F H
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 104 EYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ + SASD T++IW+ + + L GH +V F L+ SAS D TV++WD
Sbjct: 349 DSRLLASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 164 IGA-LRKKTVSPADDILR--LSQMNTDLFGGV--DAVVK----------YVLEGHDRGVN 208
G + T+ D +R + ++ L D+ VK + LEGH V
Sbjct: 408 TGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVR 467
Query: 209 WAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSE 268
F L+ S +DDR V++W + K TL GH + V+ V F ++ S S
Sbjct: 468 SVIFSHDSRLLASASDDRTVRIW--DTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASN 525
Query: 269 DKSIRVWDVTKRTGVQTF 286
D+++R+WD+ R+ TF
Sbjct: 526 DQTVRIWDIEARSLQHTF 543
Score = 251 (93.4 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 57/156 (36%), Positives = 83/156 (53%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF-HKSQPLFVSGG 70
V+ + F + ++ +++WD G+L + H VR V F H SQ L S
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASAS 440
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD +K+W+ TL GH D++R+V F H+ + SASDD+T+RIW+ + +
Sbjct: 441 DDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHT 500
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
L GH+ V SF L+ SAS DQTVR+WDI A
Sbjct: 501 LEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEA 536
Score = 249 (92.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 59/160 (36%), Positives = 85/160 (53%)
Query: 6 ETKSNRVKGLSF-HSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF-HKSQ 63
E S+ V+ + F H R +LAS +++WD G+L + H VR V F H SQ
Sbjct: 335 EGHSDLVRSVIFSHDSR--LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 392
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L S DD +K+W+ TL GH D++R+V F H+ + SASDD T++IW+
Sbjct: 393 -LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ + L GH +V F L+ SAS D+TVR+WD
Sbjct: 452 TGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWD 491
Score = 249 (92.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 80/289 (27%), Positives = 133/289 (46%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F D +R + F K +P ++ D W+ CL L GH + +V + H+
Sbjct: 256 FSPADSLIRKL-FGKEEPNWIETKPDVA-NHWS----PCLQALEGHEAAVLSVSYSHDSR 309
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+ SASDD+T++IW+ ++ + L GH+ V F L+ SAS D TV++WD G
Sbjct: 310 LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGT 368
Query: 167 -LRKKTVSPADDILR--LSQMNTDLFGGV--DAVVK----------YVLEGHDRGVNWAA 211
+ T+ D +R + ++ L D+ VK + LEGH V
Sbjct: 369 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 428
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F L+ S +DD VK+W T + + TL GH + V V+F ++ S S+D++
Sbjct: 429 FSHDSQLLASASDDSTVKIWDTG-TGSLQ-HTLEGHRDWVRSVIFSHDSRLLASASDDRT 486
Query: 272 IRVWDVTKRTGVQTFRREHDRFWILA-SHPEMNLLAAGHDSGMIVFKLE 319
+R+WD K + T ++ SH L +A +D + ++ +E
Sbjct: 487 VRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIE 535
Score = 161 (61.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + F + ++ +++WD G+L + H VR V F L S D
Sbjct: 424 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASD 483
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
D +++W+ + TL GH + +V F H+ + SAS+DQT+RIW+ ++R+
Sbjct: 484 DRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARS 538
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 242 (90.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 262
Score = 216 (81.1 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 215 (80.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN Q+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 186 (70.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 170 (64.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 215
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Score = 154 (59.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 94
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 110 (43.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 263
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 40 (19.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALE 322
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 242 (90.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 262
Score = 216 (81.1 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 215 (80.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN Q+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 186 (70.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 170 (64.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 215
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Score = 154 (59.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 94
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 110 (43.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 263
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 40 (19.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALE 322
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 242 (90.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 262
Score = 216 (81.1 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 215 (80.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN Q+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 186 (70.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 170 (64.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 215
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Score = 154 (59.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 94
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 110 (43.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 263
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 40 (19.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALE 322
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 242 (90.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 262
Score = 216 (81.1 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 215 (80.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN Q+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 186 (70.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 170 (64.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 215
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Score = 154 (59.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 94
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 110 (43.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 263
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 40 (19.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALE 322
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 242 (90.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 262
Score = 216 (81.1 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 215 (80.7 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN Q+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 203 (76.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 186 (70.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 170 (64.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 215
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 265
Score = 154 (59.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 94
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 110 (43.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 263
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 40 (19.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 275 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALE 322
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 228 (85.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 50/160 (31%), Positives = 84/160 (52%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 198 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 257
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T GH + Y F WIVS S+D + IWN QS
Sbjct: 258 AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQS 317
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+C + HP E+++ SA+L D+T+++W
Sbjct: 318 KEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 224 (83.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 59/221 (26%), Positives = 103/221 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
S SDD+T+++W + + L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 190
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 191 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 250
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T GH N C+
Sbjct: 251 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCI 289
Score = 212 (79.7 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 46/152 (30%), Positives = 72/152 (47%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VSG D
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD 134
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +KVW + L TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 135 DKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 194
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 193 (73.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 48/165 (29%), Positives = 79/165 (47%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S +++ +++W+ G + H V +F
Sbjct: 105 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF 164
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ + +CL TL H D + V F+ + IVS+S D RI
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 225 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 269
Score = 189 (71.6 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD R G + H PV VHF++ L VS
Sbjct: 156 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 215
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 216 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 275
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ TGH + Y + A+F +VS S D V +W++
Sbjct: 276 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNL 315
Score = 159 (61.0 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 57/230 (24%), Positives = 107/230 (46%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 125
Query: 147 EDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
L+VS S D+T++VW++ + KT+ + + N ++L G D V+
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 242
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 243 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 292
Score = 149 (57.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 30/113 (26%), Positives = 63/113 (55%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 121
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + ++VS S+DK+++VW+++ ++T + + + +P+ NL+ +G
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSG 174
Score = 117 (46.2 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T GH N C+
Sbjct: 233 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIF 290
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 291 ANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIAS 345
Score = 67 (28.6 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 324 LQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
Score = 41 (19.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH TA H +++ A E
Sbjct: 302 VSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTAC-HPTENIIASAALE 349
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 266 (98.7 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 64/221 (28%), Positives = 100/221 (45%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F H VR VHF V+ DD IKVW + LF+L H++++R +F +
Sbjct: 100 FKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGR 159
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-- 164
I SASDD+T+++W+ SR CI H + FHP + +A D+TV+VWD+
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRM 219
Query: 165 -----------GALRKKTVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAA 211
A+ + P+ + L + ++ L ++ + Y L GH A
Sbjct: 220 NRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVA 279
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
F T SG D QV +W+ N + A L+ H + +
Sbjct: 280 FSRTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHKSGAT 320
Score = 226 (84.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 73/255 (28%), Positives = 111/255 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D I +V F + S S D ++IW+ + + L GH VMC F P LV
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD----LFGGVDAVVKY------- 198
S S D+TV +W + TV A +R ++D + D +K
Sbjct: 78 ASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 199 VLEGHDRGVNW---AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
L + +NW A F P LI S +DD+ VKLW ++T + + H + V
Sbjct: 138 FLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW--DKTSRECIHSFCEHGGFANHVE 195
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMI 314
FH I + DK+++VWDV +Q ++ L+ HP N L+ A +DS +
Sbjct: 196 FHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLK 255
Query: 315 VFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 256 ILDLLEGRLLYTLHG 270
Score = 222 (83.2 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 72/289 (24%), Positives = 126/289 (43%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F + + + F + + + +++W + H V V F S
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGH 75
Query: 65 LFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L SG D + +W + K +F H +R+V F + +V+ASDD+TI++W
Sbjct: 76 LVASGSRDKTVCLWVPSVKGESTVFK--AHTATVRSVHFSSDGQSLVTASDDKTIKVWTV 133
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-----D 177
+ + L+ H ++V CA F P L+ SAS D+TV++WD + R+ S + +
Sbjct: 134 HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTS-RECIHSFCEHGGFAN 192
Query: 178 ILRLSQMNTDLFG-GVDAVVKY-------VLEG---HDRGVNWAAFHPTLPLIVSGADDR 226
+ T + G D VK +L+ H VN +FHP+ +++ ++D
Sbjct: 193 HVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDS 252
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+K+ + E + + TL GH +CV F D S D+ + VW
Sbjct: 253 TLKILDLLEGRL--LYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 289 (106.8 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 81/262 (30%), Positives = 130/262 (49%)
Query: 33 IQLWDYRMGTL--IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
I+++DY+ + + H+GPV + ++ Q LF SG D+ IKVW+ K RC+FTL
Sbjct: 482 IRVYDYKSQNMECVQTLKGHEGPVESICYN-DQYLF-SGSSDHSIKVWDLKKLRCIFTLE 539
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV--MCASFHPKED 148
GH + TV + +Y + S S D+TI++W+ ++ C L H V +C S
Sbjct: 540 GHDKPVHTVLLNDKY--LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS----GQ 593
Query: 149 LVVSASLDQTVRVWDIGALR-KKTVSPADD-ILRLSQMNTDLFGG-VDAVVKY------- 198
+ S S D+T++VWD+ R T+ + + + T+L+ G D ++
Sbjct: 594 YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLE 653
Query: 199 ---VLEGHDRGVNWAAFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
L GHDR W H + L+ + +DD +K+W + ET TL GH V C
Sbjct: 654 CSATLRGHDR---WVE-HMVICDKLLFTASDDNTIKIWDL-ETLRCNT-TLEGHNATVQC 707
Query: 254 VMFHAKQDIIVSNSEDKSIRVW 275
+ + ++S S D+SIRVW
Sbjct: 708 LAVWEDKKCVISCSHDQSIRVW 729
Score = 217 (81.4 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 75/270 (27%), Positives = 129/270 (47%)
Query: 65 LFVSGGDDYKIKVWNYKMHR--CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L +G D I+V++YK C+ TL GH + ++ ++ +Y + S S D +I++W+
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQY--LFSGSSDHSIKVWDL 529
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTV-SPADDILR 180
+ CI L GH+ V + K + S S D+T++VWD+ L K T+ S A +
Sbjct: 530 KKLRCIFTLEGHDKPVHTVLLNDK--YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKT 587
Query: 181 LSQMNTDLFGGV-DAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
L LF G D +K Y L+GH + V T + SG+ D+ ++
Sbjct: 588 LCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIR 645
Query: 230 LWRMNETKAWEVD-TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV-TKRTGVQTFR 287
+W + K+ E TLRGH V ++ K ++ + S+D +I++WD+ T R T
Sbjct: 646 VWNL---KSLECSATLRGHDRWVEHMVICDK--LLFTASDDNTIKIWDLETLRCNT-TLE 699
Query: 288 REHDRFWILASHPEMN-LLAAGHDSGMIVF 316
+ LA + +++ HD + V+
Sbjct: 700 GHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 199 (75.1 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 62/236 (26%), Positives = 107/236 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ + + +S HS I++WD + I + HD PV V + LF SG
Sbjct: 505 VESICYNDQYLFSGSSDHS--IKVWDLKKLRCIFTLEGHDKPVHTVLLNDKY-LF-SGSS 560
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IKVW+ K C +TL H ++T+ +Y + S S+D+TI++W+ ++ C L
Sbjct: 561 DKTIKVWDLKTLECKYTLESHARAVKTLCISGQY--LFSGSNDKTIKVWDLKTFRCNYTL 618
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADD------------IL 179
GH +V + S S D+T+RVW++ +L D +
Sbjct: 619 KGHTKWVTTICILGTN--LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLF 676
Query: 180 RLSQMNTDLFGGVDAV-VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
S NT ++ + LEGH+ V A ++S + D+ +++W N
Sbjct: 677 TASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVWGWN 732
Score = 172 (65.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E+ + VK L + ++ + + I++WD + H V + + L
Sbjct: 579 ESHARAVKTLCISGQ--YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN-L 635
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
+ SG D I+VWN K C TL GH ++ + + + +ASDD TI+IW+ ++
Sbjct: 636 Y-SGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKL--LFTASDDNTIKIWDLETL 692
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
C + L GHN V C + + V+S S DQ++RVW
Sbjct: 693 RCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 167 (63.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/234 (26%), Positives = 107/234 (45%)
Query: 108 IVSASDDQTIRIWNWQSRT--CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ + D +IR+++++S+ C+ L GH V ++ + + S S D +++VWD+
Sbjct: 473 LFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDLK 530
Query: 166 ALRKK-TVSPADDILRLSQMNTD-LFGGV-DAVVK----------YVLEGHDRGVNWAAF 212
LR T+ D + +N LF G D +K Y LE H R V
Sbjct: 531 KLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI 590
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVD-TLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
+ SG++D+ +K+W + K + + TL+GH V+ + + S S DK+
Sbjct: 591 SGQY--LFSGSNDKTIKVW---DLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKT 643
Query: 272 IRVWDVTKRTGVQTFRREHDRFWILASHP---EMNLLAAGHDSGMIVFKLERER 322
IRVW++ K R HDR W+ H + L A D+ + ++ LE R
Sbjct: 644 IRVWNL-KSLECSATLRGHDR-WV--EHMVICDKLLFTASDDNTIKIWDLETLR 693
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 279 (103.3 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 79/271 (29%), Positives = 131/271 (48%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF H+ + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHTGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W C+ T GH +++R V+ + + I S+S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ L+ T G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPES--AHPTILEAT------GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 DLFGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
V + L GHD V HP IVS ADD+ +++W + + TL
Sbjct: 320 IKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTK--TLS 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 279 (103.3 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 79/294 (26%), Positives = 135/294 (45%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
K+ +R V + FH I+++ I++WD+ G H V+ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH 160
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ L S D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
+ C+ TGH +V P +D L+ S+S DQTVRVW + K ++
Sbjct: 221 VATGYCVKTFTGHREWVRMV--RPNQDGTLIASSSNDQTVRVWVVATKECKA-----ELR 273
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
+ + ++ +LE + P P ++SG+ D+ +K+W ++
Sbjct: 274 EHEHVVECISWAPESAHPTILEATGSETKKSG-KPG-PFLLSGSRDKTIKMWDVSIGMC- 330
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V V+ H IVS ++DK++R+WD + +T H+ F
Sbjct: 331 -LMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSA-HEHF 382
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 75/298 (25%), Positives = 130/298 (43%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+ L GH + V FH + IVSAS+D TI++W+ ++ L GH V SF
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 147 EDLVVSASLDQTVRVWDIGALRK-KTVSPAD-DILRLSQM-NTD--LFGGVDAVVK---- 197
L+ S S D T+++WD +T+ D ++ ++ M N D + D +K
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 198 ---YVLE---GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV 251
Y ++ GH V + LI S ++D+ V++W + TK + + LR H + V
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVV-ATKECKAE-LREHEHVV 279
Query: 252 SCVMF---HAKQDII-VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
C+ + A I+ + SE K +G R + + W ++ + L
Sbjct: 280 ECISWAPESAHPTILEATGSETKKSGKPGPFLLSGS---RDKTIKMWDVSIGMCLMTLV- 335
Query: 308 GHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPGSTSLN 365
GHD+ + L + VS A D+ LR +++ ++ T+ + TSL+
Sbjct: 336 GHDN-WVRGVLVHPGGKYIVS-----CADDKTLRIWDYKNKRCTKTLSAHEHFVTSLD 387
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 233 (87.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 62/221 (28%), Positives = 105/221 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 169 KKTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW ++ K + T H N C+
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTC--HKNEKYCI 262
Score = 216 (81.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 45/152 (29%), Positives = 73/152 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F W+ +S +I++W G H + V + L VS D
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K+W+ +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
H+ V F+ L+VS+S D R+WD
Sbjct: 168 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 206 (77.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 47/160 (29%), Positives = 82/160 (51%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V + F+ I++S + G+ ++WD G + D+ + PV V F + +
Sbjct: 171 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W+Y +CL T H + Y F WIVS S+D + IWN Q+
Sbjct: 231 AATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 290
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 291 KEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 203 (76.5 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 4 KFE-TKSNRVKGLS---FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
KFE T S G+S + S ++++ +++WD G + H V +F
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D +++W+ K +CL TL H D + V F+ + IVS+S D RI
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 120 WNWQSRTCISVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
W+ S C+ L N V F P +++A+LD T+++WD
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 177 (67.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 42/160 (26%), Positives = 79/160 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SN V +F+ + I++ +++WD + G + H PV VHF++ L VS
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 188
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D ++W+ +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 128 ISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ T H + Y + A+F +VS S D V +W++
Sbjct: 249 LKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Score = 170 (64.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 58/230 (25%), Positives = 111/230 (48%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 147 EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVDAVVKY--- 198
+L+VSAS D+T+++WD+ + + KT+ + + N ++L G D V+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 199 -------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNN 250
L H V+ F+ LIVS + D ++W +T + + + TL N
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNP 215
Query: 251 -VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
VS V F I++ + D ++++WD +K ++T+ +++++ I A+
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFAN 265
Score = 154 (59.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 31/113 (27%), Positives = 64/113 (56%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKLGISDVA 94
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
Score = 102 (41.0 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 29/115 (25%), Positives = 53/115 (46%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V++ F P I++ D +KLW ++ K + T H N C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTC--HKNEKYCIF 263
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ IVS SED + +W++ + VQ + D A HP N++A+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIAS 318
Score = 65 (27.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+GH V A HPT +I S A +D+ +KLW+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 41 (19.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 731 VMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAE 779
V G N +Y+ +++ + + + GH + TA H +++ A E
Sbjct: 275 VSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTAC-HPTENIIASAALE 322
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 274 (101.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 66/246 (26%), Positives = 111/246 (45%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
FV+ DD +KVW+ + LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR C+ H +V FHP + +A +D TV+VWD+ A+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 236 SFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 229 KLWRMN 234
+W+ N
Sbjct: 296 MVWKSN 301
Score = 242 (90.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 76/289 (26%), Positives = 131/289 (45%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ + V + F + + + +W + T RF H V V+F S
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 65 LFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L SG D +++W N K +F H +R+V F + V+ASDD+T+++W+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLS 182
+ + L+ H ++V CA F P L+VSAS D+TV++WD + R+ S + ++
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS-RECVHSYCEHGGFVT 191
Query: 183 QMNTDLFG------GVDAVVKY-------VLEG---HDRGVNWAAFHPTLPLIVSGADDR 226
++ G G+D VK +L+ H VN +FHP+ +V+ + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDS 251
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+K+ + E + + TL GH + V F + S D+ + VW
Sbjct: 252 TLKILDLMEGRL--LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 223 (83.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 74/256 (28%), Positives = 111/256 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + +V F + S S D + +W+ + +T GH V C +F P L+
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD----LFGGVDAVVKYVLEGH-- 203
S S D+TVR+W + TV A +R +D + D VK V H
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK-VWSTHRQ 135
Query: 204 ------DRGVNW---AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ +NW A F P LIVS +DD+ VKLW ++T V + H V+ V
Sbjct: 136 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYV 193
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGM 313
FH I + D +++VWDV +Q ++ L+ HP N L+ A DS +
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 253
Query: 314 IVFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 254 KILDLMEGRLLYTLHG 269
Score = 176 (67.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 39/162 (24%), Positives = 72/162 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S + + +++W + +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +V+AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Score = 37 (18.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 709 YLITGNMDKLSKMLKIAE 726
YL+T + D K+L + E
Sbjct: 243 YLVTASSDSTLKILDLME 260
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 273 (101.2 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 66/246 (26%), Positives = 111/246 (45%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+ DD +KVW+ + LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR C+ H +V FHP + +AS+D TV+VWD+ A+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 236 SFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 229 KLWRMN 234
+W+ N
Sbjct: 296 MVWKSN 301
Score = 234 (87.4 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 71/289 (24%), Positives = 129/289 (44%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ + + + F + + + +W + + RF H V V+F S
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGH 74
Query: 65 LFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L SG D +++W N K +F H +R+V F + +V+ASDD+T+++W+
Sbjct: 75 LLASGSRDKTVRIWIPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRK 169
+ + L+ H ++V CA F P L+VSAS D+TV++WD G +
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 170 KTVSPADDILRLSQM-NTDLFGGVDA--VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
P+ + + M NT V ++++ + H VN +FHP+ +++ + D
Sbjct: 193 VDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHY-QLHSAAVNALSFHPSGNYLLTASSDS 251
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+K+ + E + + TL GH + V F + S D+ + VW
Sbjct: 252 TLKILDLMEGRL--LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 227 (85.0 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 76/256 (29%), Positives = 112/256 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D I +V F + S S D + +W+ + ++ GH V C +F P L+
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD----LFGGVDAVVKYVLEGH-- 203
S S D+TVR+W + TV A +R +D + D VK V H
Sbjct: 77 ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK-VWSTHRQ 135
Query: 204 ------DRGVNW---AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ +NW A F P LIVS +DD+ VKLW ++T V + H V+ V
Sbjct: 136 KFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYV 193
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGM 313
FH I + S D +++VWDV +Q ++ L+ HP N LL A DS +
Sbjct: 194 DFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTL 253
Query: 314 IVFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 254 KILDLMEGRLLYTLHG 269
Score = 180 (68.4 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 39/162 (24%), Positives = 74/162 (45%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S ++ + +++W + +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPD 156
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH I +AS D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +++AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258
Score = 38 (18.4 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 798 PPSPVVCSGDWP 809
PP+P+ SG+ P
Sbjct: 316 PPAPLATSGNLP 327
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 271 (100.5 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 66/246 (26%), Positives = 110/246 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
FV+ DD +KVW + LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR C+ H +V FHP + +A +D TV+VWD+ A+
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 235
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 236 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 229 KLWRMN 234
+W+ N
Sbjct: 296 MVWKSN 301
Score = 235 (87.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 71/261 (27%), Positives = 122/261 (46%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVW--NYKMHRCLFTLL 90
+ +W + + RF H V V+F S L SG D +++W N K +F
Sbjct: 43 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFR-- 100
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
H +R+V F + V+ASDD+T+++W + + L+ H ++V CA F P L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFG------GVDAVVKY------ 198
VSAS D+TV++WD + R+ S + ++ ++ G G+D VK
Sbjct: 161 VSASDDKTVKLWDKSS-RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Query: 199 -VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+L+ H VN +FHP+ +++ + D +K+ + E + + TL GH + V
Sbjct: 220 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRL--LYTLHGHQGPATTV 277
Query: 255 MFHAKQDIIVSNSEDKSIRVW 275
F + S D+ + VW
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW 298
Score = 171 (65.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 38/162 (23%), Positives = 72/162 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S + + +++W + +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +++AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Score = 158 (60.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 69/289 (23%), Positives = 118/289 (40%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F H V V F + SG D + VW+ K + GH D + V F
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+ S S D+T+RIW + +V H V F V+AS D+TV+VW
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW--AT 132
Query: 167 LRKK---TVSPADDILRLSQMNTD----LFGGVDAVVKYVLEG-----H---DRG--VNW 209
R+K ++S + +R ++ + D + D VK + H + G V +
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY 192
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
FHP+ I + D VK+W + + + L H V+ + FH + +++ S D
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQL--HSAAVNGLSFHPSGNYLITASSD 250
Query: 270 KSIRVWDVTKRTGVQTFRREHDRFWILA-SHPEMNLLAAGHDSGMIVFK 317
++++ D+ + + T +A S + G D ++V+K
Sbjct: 251 STLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 709 YLITGNMDKLSKMLKIAE 726
YLIT + D K+L + E
Sbjct: 243 YLITASSDSTLKILDLME 260
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 256 (95.2 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 61/209 (29%), Positives = 103/209 (49%)
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+++ C+ T+ GH + +V IVSAS D+TI++W Q+ C+
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 132 TGHNHYVMCASFHPKED--LVVSASLDQTVRVWDIGALR-KKTVSPADDILR-LSQMNTD 187
TGH +V P +D L+ S S DQTVRVW + K + + ++ +S
Sbjct: 63 TGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 120
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
+ + + GHD V FH I+S ADD+ +++W + + TL H
Sbjct: 121 SYSSISEATGSEV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAH 177
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
+ V+ + FH +V+ S D++++VW+
Sbjct: 178 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 211 (79.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 63/207 (30%), Positives = 95/207 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
I+LWD++ I HD V V + VS D IK+W + C+ T GH
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 65
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV-V 151
+++R V+ + + I S S+DQT+R+W ++ C + L H H V C S+ P+ +
Sbjct: 66 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 125
Query: 152 SASLDQTVRV--WDIGAL----RKKTVSPADD-ILRLSQMNTDLFGGVDAVVKYVLEGHD 204
S + V W G L K +S ADD LR+ +K L H+
Sbjct: 126 SEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK------RCMK-TLNAHE 178
Query: 205 RGVNWAAFHPTLPLIVSGADDRQVKLW 231
V FH T P +V+G+ D+ VK+W
Sbjct: 179 HFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 180 (68.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 54/188 (28%), Positives = 93/188 (49%)
Query: 112 SDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-LRKK 170
S D TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ K
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 171 TVSPADDILRLSQMNTD--LFGGV--DAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADD 225
T + + +R+ + N D L D V+ +V+ + H + +S A +
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPE 119
Query: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
++E EV GH N V V+FH+ I+S ++DK++RVWD + ++T
Sbjct: 120 SSYS--SISEATGSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT 173
Query: 286 FRREHDRF 293
H+ F
Sbjct: 174 LNA-HEHF 180
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
N V+G+ FHS +IL+ +++WDY+ + + H+ V + FHK+ P V+G
Sbjct: 137 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 196
Query: 70 GDDYKIKVW 78
D +KVW
Sbjct: 197 SVDQTVKVW 205
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 269 (99.8 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 78/292 (26%), Positives = 125/292 (42%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F S + L F I S + LW+ RF H PV GV +
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L S G D +K+W K+ + H +R+V F +++ASDD++ +IW
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVAR 133
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKT 171
R +S N++V A F P LV +AS D++VR++D+ A R+
Sbjct: 134 RQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLA 193
Query: 172 VSPADDILR--LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
P ++L L +F + + + H VN AFHP+ ++SG+DDR ++
Sbjct: 194 WHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIR 253
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRT 281
+ + E + + TL GH + V+ V F D + D+ + VW T
Sbjct: 254 ILDLLEGRP--IYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHT 303
Score = 198 (74.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 54/246 (21%), Positives = 110/246 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + S V G+++ K + ++ H +++W+ ++ + F H VR V F +
Sbjct: 55 RFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L ++ DD K+W + + + +++R+ +F + +ASDD+++RI++
Sbjct: 115 HLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVD 174
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA---LRKKTV--SPADDI 178
S C+ T ++HP +++ A ++++D+ L+ V +P +D+
Sbjct: 175 SGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDV 234
Query: 179 LRLSQMNTDLFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ L G D ++ Y L GH VN AF +G DRQ+
Sbjct: 235 AFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQL 294
Query: 229 KLWRMN 234
+W+ N
Sbjct: 295 LVWQSN 300
Score = 147 (56.8 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG----ALRKKTVS-PADDILRLSQMNT 186
TGH+ + F P + ++S D TV +W++ +R + S P + + + N
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 187 DLFGGVDAVVKY---VLEG-------HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
G D VK L G H + V F T L+++ +DD+ K+WR+
Sbjct: 75 VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
+ V + N V F ++ + S+DKS+R++DV V+TF E L
Sbjct: 135 QF--VSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQL 192
Query: 297 ASHPEMNLLA 306
A HP N+LA
Sbjct: 193 AWHPWGNMLA 202
Score = 119 (46.9 bits), Expect = 0.00087, P = 0.00087
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD-TLRGHMNNVSCVMFHAKQD 261
H VN A+ P L+ S DR VK+W E K V H V V F +
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIW---EPKLRGVSGEFVAHSKAVRSVDFDSTGH 115
Query: 262 IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH--PEMNLLA-AGHDSGMIVFKL 318
++++ S+DKS ++W V +R V +F ++++ W+ ++ P L+A A D + ++ +
Sbjct: 116 LMLTASDDKSAKIWRVARRQFVSSFAQQNN--WVRSAKFSPNGKLVATASDDKSVRIYDV 173
Query: 319 E 319
+
Sbjct: 174 D 174
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 189 (71.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 19 SKRPWILASLHS-GVIQLW---DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
SK +LAS +S G I++W DY++ + F+ H G V + F++ + VSG D +
Sbjct: 68 SKDGALLASGYSDGSIRIWSMSDYQLQAV---FNGHRGSVTTMTFNRLGNILVSGSKDTE 124
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+ VW+ LF L GH D I +V+ ++++S D I+IW+ +++ CI + GH
Sbjct: 125 VIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGH 184
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
+ + +P E + S + D +R W I
Sbjct: 185 RNPIWGIDVNPDETRLCSCTSDNQIRFWRI 214
Score = 146 (56.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 52/196 (26%), Positives = 89/196 (45%)
Query: 137 YVMCASFHPKEDLVVSASLDQTVRVW-DIGALRKKTVSPADDILRLSQM-NTDLFGGVDA 194
+ + AS + V++ SL +T++V D+ AL+ S + L +S + NT D
Sbjct: 506 FELIASQENSKHKVLNLSLTKTLKVESDVLALK---YSADNKFLAVSLLDNTVKIFYTDT 562
Query: 195 VVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
V ++ L GH V LI++G+ D+ +K+W ++ + + H +++
Sbjct: 563 VKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHK--SFFAHDDSIMQ 620
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG-HDSG 312
V F +S S+DK I+ WD K +QT H W LA + +G HD
Sbjct: 621 VSFIPSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRS 680
Query: 313 MIVFKLERERPAFAVS 328
+ +F + E P F S
Sbjct: 681 IRIFN-QTETPIFVES 695
Score = 132 (51.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 33 IQLWDYRMGTLIDRFDEHD--GPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
I +WD R L E D V V K L SG D I++W+ ++
Sbjct: 39 ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFN 98
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH + T+ F+ +VS S D + +W+ + + + L GH + + + +
Sbjct: 99 GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHL 158
Query: 151 VSASLDQTVRVWD 163
+++S D +++WD
Sbjct: 159 ITSSKDGFIKIWD 171
Score = 129 (50.5 bits), Expect = 0.00025, P = 0.00025
Identities = 53/251 (21%), Positives = 105/251 (41%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM- 82
++ +G I++++ + H+G V + SGG D +K W++++
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELI 509
Query: 83 -------HRCL-FTLLGHLDY---IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
H+ L +L L + +++ + ++ + D T++I+ + L
Sbjct: 510 ASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSL 569
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDL 188
GH VMC L+++ S D+ +++W D G K + D I+++S + +T
Sbjct: 570 YGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHH 629
Query: 189 F--GGVDAVVKY----------VLEGHDRGVNWA-AFHPTLPLIVSGADDRQVKLWRMNE 235
F D +KY +E H G W+ A +SG+ DR ++++ E
Sbjct: 630 FISASKDKRIKYWDADKFEHIQTIEAH-HGEVWSLAMGSVGDFFISGSHDRSIRIFNQTE 688
Query: 236 TKAW-EVDTLR 245
T + E D R
Sbjct: 689 TPIFVESDRQR 699
Score = 102 (41.0 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 40/177 (22%), Positives = 77/177 (43%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
HD + +F P+ +S + D+++K W + K + T+ H V + + D
Sbjct: 614 HDDSIMQVSFIPSTHHFISASKDKRIKYW--DADKFEHIQTIEAHHGEVWSLAMGSVGDF 671
Query: 263 IVSNSEDKSIRVWDVTKRT-GVQTFR-REHDRFWILASHPEMNLLAAGH-DSGMIVFKLE 319
+S S D+SIR+++ T+ V++ R RE ++ W + + + K
Sbjct: 672 FISGSHDRSIRIFNQTETPIFVESDRQREMEQTWEATLEDDTRMRTKEMLEENAAAGKQT 731
Query: 320 RERPAFAVSGDSLFYA-----KDRF-LRYYE--FSTQKDTQVIPIRRPGSTSLNQSP 368
E ++G+ + A +++F + YE T K+ IP+ +P L SP
Sbjct: 732 LET---IMAGEDILDAIELCVQEKFKIDEYEKLLKTTKNQDEIPLYQPNIIMLGLSP 785
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH IR++ +VS S + ++++WN +S +CI + Y +C F P V
Sbjct: 394 GHRSDIRSLSLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIACD--YGLCTVFAPGNLHV 450
Query: 151 VSASLDQTVRVWDIG-ALRKKTVSPADDILRLSQMNTDL----FGGVDAVVKY 198
+ + T+ V+++ A R ++ + + + DL GG D +VK+
Sbjct: 451 IVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKF 503
Score = 88 (36.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/149 (20%), Positives = 58/149 (38%)
Query: 38 YRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIR 97
+ + + +D+ H +R + + + VS + +KVWN K C+ ++ DY
Sbjct: 384 FEVSSTLDQAG-HRSDIRSLSLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIA--CDYGL 439
Query: 98 TVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQ 157
F ++ + TI ++ S ++ + H V P V S D+
Sbjct: 440 CTVFAPGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADK 499
Query: 158 TVRVWDIGALRKKTVSPADDILRLSQMNT 186
V+ WD + + S +L LS T
Sbjct: 500 LVKFWDFELIASQENSK-HKVLNLSLTKT 527
Score = 58 (25.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 28/157 (17%), Positives = 61/157 (38%)
Query: 163 DIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLE--GHDRGVNWAAFHPTLPLIV 220
DI K ++ A + L ++ GG V L+ GH + + ++V
Sbjct: 353 DIKHWNKFVITLAGNSLEAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLSSNDQMLV 412
Query: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVS-CVMFHAKQDIIVSNSEDKSIRVWDVTK 279
S + + VK+W M + +R + C +F ++ ++ +I V+++
Sbjct: 413 STSSE-SVKVWNMKS-----LSCIRSIACDYGLCTVFAPGNLHVIVGTKTGTIEVFELAS 466
Query: 280 RTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVF 316
V + + W L P++ + +G ++ F
Sbjct: 467 AARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKF 503
Score = 46 (21.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 25/126 (19%), Positives = 53/126 (42%)
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
VS++LDQ DI +L ++S D +L + + + ++ D G+
Sbjct: 386 VSSTLDQAGHRSDIRSL---SLSSNDQMLVSTSSESVKVWNMKSLSCIRSIACDYGL-CT 441
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F P ++ G ++++ + A V +++ H +V ++ + S DK
Sbjct: 442 VFAPGNLHVIVGTKTGTIEVFEL--ASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADK 499
Query: 271 SIRVWD 276
++ WD
Sbjct: 500 LVKFWD 505
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 235 (87.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 61/221 (27%), Positives = 101/221 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H + V F + S D I +W C TL GH I V + + +V
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLV 97
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+T+++W+ +S C+ L GH+ +V C F+P +L+VS S D++V++W++ +
Sbjct: 98 SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKC 157
Query: 169 KKTVSPADDILRLSQMNTD----LFGGVDAVVKY--VLEGH------DRG---VNWAAFH 213
KT+S D + N + + G D + + G D G V++ F
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFS 217
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P I++ D +KLW + + + T GH N C+
Sbjct: 218 PNGKYILTATLDNTLKLWDYSRGRC--LKTYTGHKNEKYCL 256
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 49/167 (29%), Positives = 85/167 (50%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFH 60
L S+ + ++F+ I++ + G+ ++WD G + DE + PV V F
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFS 217
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHE-YPWIVSASDDQTI 117
+ ++ D +K+W+Y RCL T GH + Y F W+VS S+D +
Sbjct: 218 PNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMV 277
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
IWN Q++ + L GH V+ A+ HP ++++ SA+L D+T++VW
Sbjct: 278 YIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 208 (78.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S + + F W+ +S +I +W G H + V + VS
Sbjct: 39 SAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVS 98
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
DD +KVW+ + +CL TL GH D++ F+ IVS S D++++IW ++ C+
Sbjct: 99 ASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCL 158
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
L+ H+ + +F+ L+VS S D R+WD
Sbjct: 159 KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Score = 198 (74.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 47/156 (30%), Positives = 73/156 (46%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S + +++ S ++++ +++WD R G + H V F+ L VS
Sbjct: 81 SLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVS 140
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G D +K+W K +CL TL H D I V F+ IVS S D RIW+ S C+
Sbjct: 141 GSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCL 200
Query: 129 SVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
L N V F P +++A+LD T+++WD
Sbjct: 201 RTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 174 (66.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 38/136 (27%), Positives = 70/136 (51%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+++W+ + G + H P+ V+F+ + L VSG D ++W+ +CL TL
Sbjct: 147 VKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADE 206
Query: 93 LDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNH--YVMCASFHPK-ED 148
+ + V+F +I++A+ D T+++W++ C+ TGH + Y + ASF
Sbjct: 207 GNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRK 266
Query: 149 LVVSASLDQTVRVWDI 164
VVS S D V +W++
Sbjct: 267 WVVSGSEDNMVYIWNL 282
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/237 (25%), Positives = 108/237 (45%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NY + TL GH I +V+F W+ S++ D I IW C L GH+ +
Sbjct: 28 NYALR---LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEI 84
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMN--TDLF--GGVD 193
++ +VSAS D+T++VWD+ + + KT+ D + N ++L G D
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 194 AVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
VK L H ++ F+ LIVSG+ D ++W + + T
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC--LRT 202
Query: 244 LRGHMNN-VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
L N VS V F I++ + D ++++WD ++ ++T+ +++++ + AS
Sbjct: 203 LADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFAS 259
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/126 (27%), Positives = 64/126 (50%)
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
++G D K L GH ++ A+ +VS +DD+ +K+W M K + TL+GH
Sbjct: 65 IWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKC--LKTLKGH 122
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
+ V C F+ ++IVS S D+S+++W+V ++T D + + +L+ +
Sbjct: 123 SDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVS 182
Query: 308 GHDSGM 313
G G+
Sbjct: 183 GSYDGL 188
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/125 (24%), Positives = 61/125 (48%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
++ L GH ++ F P + S A D + +W + + TL GH +S V
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK--TLYGHSLEISDVA 88
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMI 314
+ + +VS S+DK+++VWD+ ++T + D + +P NL+ +G D +
Sbjct: 89 WSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVK 148
Query: 315 VFKLE 319
+++++
Sbjct: 149 IWEVK 153
Score = 104 (41.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 28/104 (26%), Positives = 48/104 (46%)
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM--FHAK-QDII 263
V++ F P I++ D +KLW + + + T GH N C+ F + +
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRC--LKTYTGHKNEKYCLFASFSVTGRKWV 268
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
VS SED + +W++ + VQ + D A HP N++A+
Sbjct: 269 VSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIAS 312
Score = 65 (27.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLW 231
L+GH V AA HPT +I S A +D+ +K+W
Sbjct: 291 LQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 269 (99.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 67/246 (27%), Positives = 109/246 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V ++F + + +++W + F H VR VHF
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+ DD +KVW+ R LF+L H++++R +F + IVSASDD+T+++W+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR CI H +V FHP + +A +D TV+VWD A+
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNAL 235
Query: 171 TVSPADDILRLSQMNTDL--FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + L + ++ L ++ + Y L GH AF T SG D QV
Sbjct: 236 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 229 KLWRMN 234
+W+ N
Sbjct: 296 MVWKSN 301
Score = 243 (90.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 73/289 (25%), Positives = 128/289 (44%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ + V + F + + + +W + + RF H V V+F S
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 65 LFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L SG D +++W N K +F H +R+V F + +V+ASDD+T+++W+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRK 169
+ + LT H ++V CA F P L+VSAS D+TV++WD G +
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTY 192
Query: 170 KTVSPADDILRLSQMNTDLFGGVDAVVKYVLEG---HDRGVNWAAFHPTLPLIVSGADDR 226
P+ + + M+ + DA +L+ H VN +FHP+ +++ + D
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVW-DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDS 251
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+K+ + E + + TL GH + V F + S D+ + VW
Sbjct: 252 TLKILDLMEGRL--LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 224 (83.9 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 74/256 (28%), Positives = 111/256 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + V F + S S D T+ IW+ + ++ TGH V C +F P L+
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD----LFGGVDAVVKYVLEGH-- 203
S S D+TVR+W + TV A +R +D + D VK V H
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK-VWSTHRQ 135
Query: 204 ------DRGVNW---AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ +NW A F P LIVS +DD+ VKLW ++T + + H V+ V
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRECIHSYCEHGGFVTYV 193
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGM 313
FH I + D +++VWD +Q ++ L+ HP N L+ A DS +
Sbjct: 194 DFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Query: 314 IVFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 254 KILDLMEGRLLYTLHG 269
Score = 177 (67.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F + V+ + F S ++ + +++W + +H VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD +K+W+ C+ + H ++ V FH I +A D T+++W+
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA 216
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ + H+ V SFHP + +++AS D T+++ D+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 38 (18.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 709 YLITGNMDKLSKMLKIAE 726
YLIT + D K+L + E
Sbjct: 243 YLITASSDSTLKILDLME 260
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 268 (99.4 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 78/274 (28%), Positives = 123/274 (44%)
Query: 23 W-ILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNY 80
W I+AS I++WDY G L H V + + VS D IK+W++
Sbjct: 118 WTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDF 177
Query: 81 -KMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
+ + CL +L GH + +V F +++SAS D TI+ W+ + C+ GHN +V
Sbjct: 178 GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVR 237
Query: 140 CASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYV 199
L SASLDQTV VW K V LR + +
Sbjct: 238 MIRISNDGTLFASASLDQTVTVWSFATKSAKLV------LRDHEHAVECVEWAPDTAYTN 291
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
+ G N + H ++ SG+ DR +K W +N + TL H N V + FH K
Sbjct: 292 VTGQQPEGN--STH----ILFSGSRDRSIKAWNINTGDV--LFTLLAHENWVRGLAFHPK 343
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
++S ++DK++RVW+++ + ++ H+ F
Sbjct: 344 GKYLISVADDKTLRVWELSAQRCMKAIEA-HEHF 376
Score = 250 (93.1 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 66/254 (25%), Positives = 119/254 (46%)
Query: 25 LASLHSGV-IQLWDY-RMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
L S S + I+LWD+ + + H+ V V F + +S D+ IK W+
Sbjct: 163 LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIST 222
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
C++T GH D++R ++ ++ SAS DQT+ +W++ +++ VL H H V C
Sbjct: 223 GYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVE 282
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEG 202
+ P +A + T + + + D ++ +NT D V + L
Sbjct: 283 WAPD-----TAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTG-----D--VLFTLLA 330
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
H+ V AFHP ++S ADD+ +++W ++ + + + H + VS V FH
Sbjct: 331 HENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKA--IEAHEHFVSTVAFHQTSPF 388
Query: 263 IVSNSEDKSIRVWD 276
+++ S D S +VW+
Sbjct: 389 VITGSVDMSCKVWE 402
Score = 236 (88.1 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H P+ V FH + S +D IKVW+Y+ + TL GH D + + +V
Sbjct: 105 HRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLV 164
Query: 110 SASDDQTIRIWNW-QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-L 167
S S D +I++W++ Q+ C+ L GH H V +F P D V+SAS D T++ WDI
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGY 224
Query: 168 RKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVN-WAAFHPTLPLIVSGADDR 226
T +D +R+ +++ D G + A D+ V W+ + L++ D
Sbjct: 225 CVYTFRGHNDWVRMIRISND--GTLFASASL-----DQTVTVWSFATKSAKLVLR---DH 274
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQD-IIVSNSEDKSIRVWDVTKRTGVQT 285
+ + E W DT NV+ I+ S S D+SI+ W++ TG
Sbjct: 275 EHAV----ECVEWAPDTA---YTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN--TGDVL 325
Query: 286 FRREHDRFWI--LASHPEMN-LLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRF 339
F W+ LA HP+ L++ D + V++L +R A+ F + F
Sbjct: 326 FTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAF 382
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 55/245 (22%), Positives = 100/245 (40%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L + + V ++F ++L++ I+ WD G + F H+ VR +
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISN 243
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPW-------------- 107
LF S D + VW++ L H + V++ + +
Sbjct: 244 DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTH 303
Query: 108 -IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+ S S D++I+ WN + + L H ++V +FHPK ++S + D+T+RVW++ A
Sbjct: 304 ILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSA 363
Query: 167 LRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
R +K +E H+ V+ AFH T P +++G+ D
Sbjct: 364 QR--------------------------CMK-AIEAHEHFVSTVAFHQTSPFVITGSVDM 396
Query: 227 QVKLW 231
K+W
Sbjct: 397 SCKVW 401
Score = 129 (50.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 50/182 (27%), Positives = 80/182 (43%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L GH I V FH + + S S+D TI++W++++ L GH V +
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 149 LVVSASLDQTVRVWDIG-------ALR--KKTVS-----PADD-ILRLSQMNTDLFGGVD 193
+VS S D ++++WD G +L+ + TVS P D +L S+ +T +
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 194 A-VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Y GH+ V L S + D+ V +W TK+ ++ LR H + V
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSF-ATKSAKL-VLRDHEHAVE 279
Query: 253 CV 254
CV
Sbjct: 280 CV 281
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 252 (93.8 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 60/206 (29%), Positives = 102/206 (49%)
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
IK+W+++ C+ T+ GH + +V IVSAS D+TI++W Q+ C+ TGH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 135 NHYVMCASFHPKED--LVVSASLDQTVRVWDIGALR-KKTVSPADDILR-LSQMNTDLFG 190
+V P +D L+ S S DQTVRVW + K + + ++ +S +
Sbjct: 63 REWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS 120
Query: 191 GVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN 250
+ + GHD V FH I+S ADD+ +++W + + TL H +
Sbjct: 121 SISEATGSEV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHF 177
Query: 251 VSCVMFHAKQDIIVSNSEDKSIRVWD 276
V+ + FH +V+ S D++++VW+
Sbjct: 178 VTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 211 (79.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 63/207 (30%), Positives = 95/207 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
I+LWD++ I HD V V + VS D IK+W + C+ T GH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV-V 151
+++R V+ + + I S S+DQT+R+W ++ C + L H H V C S+ P+ +
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 122
Query: 152 SASLDQTVRV--WDIGAL----RKKTVSPADD-ILRLSQMNTDLFGGVDAVVKYVLEGHD 204
S + V W G L K +S ADD LR+ +K L H+
Sbjct: 123 SEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK------RCMK-TLNAHE 175
Query: 205 RGVNWAAFHPTLPLIVSGADDRQVKLW 231
V FH T P +V+G+ D+ VK+W
Sbjct: 176 HFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 172 (65.6 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 116 TIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-LRKKTVSP 174
TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ KT +
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 175 ADDILRLSQMNTD--LFGGV--DAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
+ +R+ + N D L D V+ +V+ + H + +S A +
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYS 120
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRRE 289
++E EV GH N V V+FH+ I+S ++DK++RVWD + ++T
Sbjct: 121 --SISEATGSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA- 173
Query: 290 HDRF 293
H+ F
Sbjct: 174 HEHF 177
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
N V+G+ FHS +IL+ +++WDY+ + + H+ V + FHK+ P V+G
Sbjct: 134 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 193
Query: 70 GDDYKIKVW 78
D +KVW
Sbjct: 194 SVDQTVKVW 202
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 270 (100.1 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 87/306 (28%), Positives = 137/306 (44%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
+ +F+ + V L F+ + + + I +WD G LI R H V+ ++F
Sbjct: 295 IQEFKGHMDGVLTLQFNYRL--LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD 352
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ ++G D I+VWNY C+ T GH D + +V + + IVS S D+T+++W+
Sbjct: 353 RK--LITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKV--IVSGSADKTVKVWH 408
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALR 168
+SRTC + L GH +V C HPK S S D T+R+WDI G ++
Sbjct: 409 VESRTCYT-LRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQ 467
Query: 169 KKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPT-----LPL---IV 220
K D+ L+ NT G + +G D + T +P ++
Sbjct: 468 KIIPLTIKDVENLATDNTS-DGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTHLL 526
Query: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR 280
S D +KLW + K + T GH+ V + A I+S S D SI+VWD+
Sbjct: 527 SCGLDNTIKLWDVKTGKC--IRTQFGHVEGVWDIA--ADNFRIISGSHDGSIKVWDLQSG 582
Query: 281 TGVQTF 286
+ TF
Sbjct: 583 KCMHTF 588
Score = 186 (70.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 43/134 (32%), Positives = 70/134 (52%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ + S+ VK L F ++ I SL I++W+Y G I + H V V +
Sbjct: 334 LIRRLSGHSDGVKTLYFDDRK-LITGSLDK-TIRVWNYITGECISTYRGHSDSVLSVDSY 391
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Q + VSG D +KVW+ + C +TL GH +++ V+ H + S SDD TIR+W
Sbjct: 392 --QKVIVSGSADKTVKVWHVESRTC-YTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMW 448
Query: 121 NWQSRTCISVLTGH 134
+ ++ +C+ V GH
Sbjct: 449 DIRTNSCLKVFRGH 462
Score = 180 (68.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 63/237 (26%), Positives = 106/237 (44%)
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRC-LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
++P V + +K++ N++ C + GH+D + T+QF+ Y + + S D TI IW
Sbjct: 271 TRPWKVIYRERFKVES-NWRKGHCRIQEFKGHMDGVLTLQFN--YRLLFTGSYDSTIGIW 327
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI 178
+ + I L+GH+ V F ++ +++ SLD+T+RVW+ G +D +
Sbjct: 328 DLFTGKLIRRLSGHSDGVKTLYFDDRK--LITGSLDKTIRVWNYITGECISTYRGHSDSV 385
Query: 179 LRL-SQMNTDLFGGVDAVVK---------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
L + S + G D VK Y L GH VN HP S +DD +
Sbjct: 386 LSVDSYQKVIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTI 445
Query: 229 KLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI---IVSNSEDKSIRVWDVTKRTG 282
++W + +V RGH+ V ++ +D+ N+ D S D T G
Sbjct: 446 RMWDIRTNSCLKV--FRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDG 500
Score = 177 (67.4 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 56/203 (27%), Positives = 92/203 (45%)
Query: 99 VQFHHEYPWIVSASDDQTIRIWNWQSRTC-ISVLTGHNHYVMCASFHPKEDLVVSASLDQ 157
+Q PW V + + NW+ C I GH V+ F+ + L+ + S D
Sbjct: 266 IQTQTTRPWKVIYRERFKVES-NWRKGHCRIQEFKGHMDGVLTLQFNYR--LLFTGSYDS 322
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF-GGVDAVVK---YVL-------EGHD 204
T+ +WD+ G L ++ +D + L + L G +D ++ Y+ GH
Sbjct: 323 TIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHS 382
Query: 205 RGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIV 264
V + +IVSG+ D+ VK+W + + TLRGH V+CV H K
Sbjct: 383 DSV--LSVDSYQKVIVSGSADKTVKVWHVESRTCY---TLRGHTEWVNCVKLHPKSFSCF 437
Query: 265 SNSEDKSIRVWDVTKRTGVQTFR 287
S S+D +IR+WD+ + ++ FR
Sbjct: 438 SCSDDTTIRMWDIRTNSCLKVFR 460
Score = 58 (25.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 263 IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
++S D +I++WDV ++T + W +A+ +++ HD + V+ L+ +
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAAD-NFRIISGSHDGSIKVWDLQSGK 583
Query: 323 PAFAVSGDSL 332
+G L
Sbjct: 584 CMHTFNGRRL 593
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 272 (100.8 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 86/282 (30%), Positives = 136/282 (48%)
Query: 22 PWILASLHSGVIQL-W---DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKV 77
PW A + +I++ W R ++ D+H + + F ++ VSG DD +KV
Sbjct: 964 PWKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDH--VITCLQFSGNR--IVSGSDDNTLKV 1019
Query: 78 WNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHY 137
W+ +CL TL+GH + + Q I+S S D+T+++W+ S C+ L GH
Sbjct: 1020 WSAVNGKCLRTLVGHTGGVWSSQMSGNI--IISGSTDRTLKVWDMDSGACVHTLQGHTST 1077
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVD 193
V C H + VVS S D T+RVWDI G+ V + R Q + L G D
Sbjct: 1078 VRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAV-RCVQYDGKLIVSGAYD 1134
Query: 194 AVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
+VK + L+GH V F +VSG+ D +++W + ET + T
Sbjct: 1135 YMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDV-ETGNCK-HT 1190
Query: 244 LRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
L GH + S + +Q+I+VS + D +++VWD+T +QT
Sbjct: 1191 LMGHQSLTSGM--ELRQNILVSGNADSTVKVWDITTGQCLQT 1230
Score = 240 (89.5 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 77/284 (27%), Positives = 132/284 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V S + +SG D
Sbjct: 1001 LQFSGNR--IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM--SGNIIISGSTDRT 1056
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVW+ C+ TL GH +R + H +VS S D T+R+W+ + +C+ VL GH
Sbjct: 1057 LKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGH 1114
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWD------IGALRKKT---VSPADDILRL--SQ 183
V C + K L+VS + D V++W + L+ T S D L +
Sbjct: 1115 LAAVRCVQYDGK--LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGS 1172
Query: 184 MNTDL-FGGVDAV-VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
++T + V+ K+ L GH + + +VSG D VK+W + + +
Sbjct: 1173 LDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNI--LVSGNADSTVKVWDITTGQC--L 1228
Query: 242 DTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
TL G H + V+C+ F+++ +V++S+D ++++WDV +TG
Sbjct: 1229 QTLSGPNKHHSAVTCLQFNSR--FVVTSSDDGTVKLWDV--KTG 1268
Score = 211 (79.3 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 45/156 (28%), Positives = 83/156 (53%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
++ V+ + H + +++ +++WD G+ + H VR V + L VS
Sbjct: 1075 TSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK--LIVS 1130
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G DY +K+W+ + CL TL GH + + ++QF + +VS S D +IR+W+ ++ C
Sbjct: 1131 GAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVETGNCK 1188
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH + + +++++VS + D TV+VWDI
Sbjct: 1189 HTLMGHQS--LTSGMELRQNILVSGNADSTVKVWDI 1222
Score = 163 (62.4 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 106 PWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQTVRVW 162
PW + I + NW+SR VL GH+ H + C F +VS S D T++VW
Sbjct: 964 PWKAAYMRQHIIEM-NWRSRPVRKPKVLKGHDDHVITCLQFSGNR--IVSGSDDNTLKVW 1020
Query: 163 DI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGHDRGVN 208
G + V + SQM+ ++ G D +K + L+GH V
Sbjct: 1021 SAVNGKCLRTLVGHTGGVWS-SQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR 1079
Query: 209 WAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSE 268
H + +VSG+ D +++W + + V L GH+ V CV + K +IVS +
Sbjct: 1080 CMHLHGSK--VVSGSRDATLRVWDIEQGSCLHV--LVGHLAAVRCVQYDGK--LIVSGAY 1133
Query: 269 DKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
D +++W ++ + T + +R + L +++++ D+ + V+ +E
Sbjct: 1134 DYMVKIWHPERQECLHTLQGHTNRVYSL-QFDGLHVVSGSLDTSIRVWDVE 1183
Score = 131 (51.2 bits), Expect = 0.00023, P = 0.00023
Identities = 35/116 (30%), Positives = 56/116 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+NRV L F + SL + I++WD G H G+ Q + VS
Sbjct: 1155 TNRVYSLQFDGLHV-VSGSLDTS-IRVWDVETGNCKHTLMGHQSLTSGMELR--QNILVS 1210
Query: 69 GGDDYKIKVWNYKMHRCLFTLLG---HLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
G D +KVW+ +CL TL G H + +QF+ + +V++SDD T+++W+
Sbjct: 1211 GNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRF--VVTSSDDGTVKLWD 1264
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 260 (96.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 69/232 (29%), Positives = 110/232 (47%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
L TL GH D+I TV F + + S S+D TI++W+ S L GH+ V +F P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 146 KEDLVVSASLDQTVRVWDIGA--LRKKTVSPADDILRLS-QMNTDLFGGVDAVVKYVLEG 202
L+ S S D T+++W+ + L+ +D + ++ N L+ +K+ +EG
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEG 153
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
H V AF P L+ SG+ ++ +KLW + TL GH N V ++F +
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLW--DSATCGLKHTLGGHSNWVLPLVFSPDGRL 211
Query: 263 IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
+ S S D +I++WD + T ++ LA P LLA+G I
Sbjct: 212 LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATI 263
Score = 260 (96.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 82/298 (27%), Positives = 132/298 (44%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L E S+ ++ ++F + + + I+LWD G L + H V+ V F
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ L SG D IK+WN T+ GH D + +V F + + Q +WN
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAF---------SPNGQ---LWN 141
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTV-------- 172
+ + GH+ +V+ +F P L+ S S ++T+++WD K T+
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 173 ----SPADDILRLSQMNT---DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADD 225
SP D L S N L+ +K+ LEGH + AF P L+ SG+ D
Sbjct: 202 PLVFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Query: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGV 283
+KLW T ++ TL+GH + V V+F ++ S S D +I++WD TG+
Sbjct: 261 ATIKLWD-TATGSFR-HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPA--TGI 314
Score = 171 (65.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 50/185 (27%), Positives = 81/185 (43%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E S+ V ++F + + I+LWD L H V + F L
Sbjct: 152 EGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRL 211
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
SG +D IK+W+ TL GH + I ++ F + S S D TI++W+ +
Sbjct: 212 LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATG 271
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRLSQ 183
+ L GH+ V+ F P L+ S S D T+++WD G L+ +P I+R +
Sbjct: 272 SFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTPG--IVRSIE 329
Query: 184 MNTDL 188
+ +L
Sbjct: 330 FSIEL 334
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 256 (95.2 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 78/278 (28%), Positives = 131/278 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEY-PWI 108
H P+ V +KS F++G D K+W+ L TL GH + + + F++ Y I
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
+ S D+T ++W+ ++ C GH ++C SF+P+ LV + S+D T ++WDI +
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGE 210
Query: 169 KK-TVSP-ADDILRLSQMNTD----LFGGVDAVVK----------YVLEGHDRGVNWAAF 212
+ T++ + +I+ LS NT + G D V Y L GH ++ A F
Sbjct: 211 EVFTLTGHSAEIISLS-FNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVF 269
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV--SCVMFHAKQDIIVSNSEDK 270
+ LI++G+ D+ KLW K V TL GH + + SC + K +I + S D
Sbjct: 270 NWDCSLILTGSMDKTCKLWDAVNGKC--VATLTGHDDEILDSCFDYTGK--LIATASADG 325
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ R++ R V ++ +P+ N L G
Sbjct: 326 TARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTG 363
Score = 237 (88.5 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 64/259 (24%), Positives = 120/259 (46%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHL 93
+LW G F H + + F+ L +G D K+W+ + +FTL GH
Sbjct: 160 KLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHS 219
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
I ++ F+ I++ S D T+ +W + + L GH + A F+ L+++
Sbjct: 220 AEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTG 279
Query: 154 SLDQTVRVWDIGALRKKTVSPA----DDILR---------LSQMNTD----LFGGVDAVV 196
S+D+T ++WD A+ K V+ D+IL ++ + D +F
Sbjct: 280 SMDKTCKLWD--AVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATREC 337
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
LEGH+ ++ +F+P +++G+ D+ ++W + +V L GH + + F
Sbjct: 338 VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQV--LEGHTDEIFSCAF 395
Query: 257 HAKQDIIVSNSEDKSIRVW 275
+ K DII++ S+D + R+W
Sbjct: 396 NYKGDIIITGSKDNTCRIW 414
Score = 229 (85.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 69/291 (23%), Positives = 126/291 (43%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ-PLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+LWD G + + H V + F+ +G D K+W+ + +C T GH
Sbjct: 117 KLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGH 176
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I + F+ + + + S D T ++W+ QS + LTGH+ ++ SF+ + +++
Sbjct: 177 TAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIIT 236
Query: 153 ASLDQTVRVWDIGALRKK-TVSPADDILRLSQMNTD----LFGGVDAVVKY--------- 198
S D TV VW+ RK T+ + + N D L G +D K
Sbjct: 237 GSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCV 296
Query: 199 -VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
L GHD + + F T LI + + D +++ + V L GH +S + F+
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATREC--VTKLEGHEGEISKISFN 354
Query: 258 AKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++ S DK+ R+WD +Q D + A + + +++ G
Sbjct: 355 PQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 405
Score = 218 (81.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/234 (25%), Positives = 109/234 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
LSF+ + + +LWD + G + H + + F+ S ++G D+
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT 242
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+ VW R ++TL+GH I + F+ + I++ S D+T ++W+ + C++ LTGH
Sbjct: 243 VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGH 302
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK---KTVSPADDILRLS---QMNTDL 188
+ ++ + F L+ +AS D T R++ A R+ K +I ++S Q N L
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFS-AATRECVTKLEGHEGEISKISFNPQGNRLL 361
Query: 189 FGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
G D + VLEGH + AF+ +I++G+ D ++WR
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 183 (69.5 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 43/155 (27%), Positives = 75/155 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S + LSF++ I+ + +W+ G + H + F+ L ++
Sbjct: 219 SAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILT 278
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G D K+W+ +C+ TL GH D I F + I +AS D T RI++ +R C+
Sbjct: 279 GSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECV 338
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ L GH + SF+P+ + +++ S D+T R+WD
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 63/257 (24%), Positives = 113/257 (43%)
Query: 61 KSQPLFV-SGGDDYKI-------KVWNYKMHRC-LFTLL-GHLDYIRTVQFHHEYPWIVS 110
K++PL S D K+ K+ + H+ LF +L H+ + V + ++
Sbjct: 50 KAEPLITASRSDQVKLLIQRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFIT 109
Query: 111 ASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH-PKEDLVVSASLDQTVRVWDI--GAL 167
S D+T ++W+ S + L GH + V +F+ P D + + S D+T ++W + G
Sbjct: 110 GSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC 169
Query: 168 RKKTVSPADDILRLS---QMNTDLFGGVDAVVK----------YVLEGHDRGVNWAAFHP 214
+I+ LS Q G +D K + L GH + +F+
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNT 229
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
+ I++G+ D V +W + + +V TL GH +S +F+ +I++ S DK+ ++
Sbjct: 230 SGNRIITGSFDHTVTVWEADTGR--KVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKL 287
Query: 275 WDVTKRTGVQTFRREHD 291
WD V T HD
Sbjct: 288 WDAVNGKCVATLTG-HD 303
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 261 (96.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 85/290 (29%), Positives = 134/290 (46%)
Query: 18 HSKRPWILASLHSGVIQL-W---DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDY 73
HS PW A + I W D + ++ D+H + + F ++ VSG DD
Sbjct: 401 HS--PWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDH--VITCLQFCGNR--IVSGSDDN 454
Query: 74 KIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTG 133
+KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++ CI L G
Sbjct: 455 TLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYG 512
Query: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMNTD--LFG 190
H V C H K VVS S D T+RVWDI + V +R Q + + G
Sbjct: 513 HTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 570
Query: 191 GVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 571 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNC-- 626
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
+ TL GH + S + K +I+VS + D ++++WD+ +QT + H
Sbjct: 627 IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPH 674
Score = 243 (90.6 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 74/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 440 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 495
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 496 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 553
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 554 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 609
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 610 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 666
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ RTG
Sbjct: 667 -LQTLQGPHKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--RTG 707
Score = 173 (66.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + + +R +++ + ++++WD T + H V + F VSG
Sbjct: 557 VRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSL 612
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D I+VW+ + C+ TL GH ++ +VS + D T++IW+ ++ C+ L
Sbjct: 613 DTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTL 670
Query: 132 TG-HNHY--VMCASFHPKEDLVVSASLDQTVRVWDI 164
G H H V C F+ ++ V+++S D TV++WD+
Sbjct: 671 QGPHKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 704
Score = 147 (56.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 399 FTHS-PW-KSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 454
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 455 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 513
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 514 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 567
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 568 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 622
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 256 (95.2 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 81/296 (27%), Positives = 134/296 (45%)
Query: 40 MGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTV 99
MG+ + R E D + + H + V+G DD +KVW ++TL+GH + T
Sbjct: 246 MGSAVLRGHE-DHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTS 302
Query: 100 QFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTV 159
Q +IVS S D+T+++W+ + + L GH V C + ++V+ S D T+
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTL 360
Query: 160 RVWDIGALRK-KTVSPADDILRLSQMN--TDLFGGVDAVVKY----------VLEGHDRG 206
RVWD+ + R T+ +R Q + T + GG D VK L GH+
Sbjct: 361 RVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR 420
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVS 265
V F ++ SG+ D +++W + E V L+GH + S + +I+VS
Sbjct: 421 VYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG--NILVS 478
Query: 266 NSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI-VFKLER 320
+ D +RVWD+ + T V L N++A D G + ++ +ER
Sbjct: 479 CNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIER 533
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 67/222 (30%), Positives = 99/222 (44%)
Query: 76 KVWNYKMHRCLFTLLGHLDYIRT-VQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
K WN L GH D++ T +Q H + +V+ SDD T+++W + L GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYTLVGH 295
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--G 190
V + +VS S D+TV+VW G+L T+ +R M + G
Sbjct: 296 TGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH-TLQGHTSTVRCMAMAGSILVTG 354
Query: 191 GVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
D ++ L GH V F T +VSG D VK+W + +
Sbjct: 355 SRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC-- 410
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL GH N V ++F +++ I+ S S D SIRVWD T+ G
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEG 452
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 65/225 (28%), Positives = 103/225 (45%)
Query: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+I++ +++W G+L+ H VR + S + V+G D ++VW+ +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVES 367
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L TL GH +R VQF + +VS D T++IWN + CI LTGHN+ V
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 143 FHPKEDLVVSASLDQTVRVWD---------IGALRKKTVSPADDILR---LSQMNTDLFG 190
F + +V S SLD ++RVWD + L+ T + LR L N D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHV 485
Query: 191 GV----DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
V + ++L GH + + ++ + +DD VKLW
Sbjct: 486 RVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLW 529
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/263 (23%), Positives = 120/263 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+++W G ++ H G V + VSG D +KVW+ L TL GH
Sbjct: 278 LKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGH 337
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R + +V+ S D T+R+W+ +S ++ L GH+ V C F VVS
Sbjct: 338 TSTVRCMAMAGSI--LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVS 393
Query: 153 ASLDQTVRVWDIGALRK-KTVSPADD----ILRLSQMNTDLFGGVDAVVKYVLEGHDRGV 207
D TV++W+ R +T++ ++ +L S+ + G +D ++ G
Sbjct: 394 GGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ 453
Query: 208 NWAAF---HPTLP--------LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
A H +L ++VS D V++W ++E V L GH + ++ + +
Sbjct: 454 ECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTC--VHMLSGHRSAITSLQW 511
Query: 257 HAKQDIIVSNSEDKSIRVWDVTK 279
+ +++ ++S+D ++++WD+ +
Sbjct: 512 FGR-NMVATSSDDGTVKLWDIER 533
Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 121 NWQSRTCI--SVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPA 175
NW + + +VL GH +H + C H +D++V+ S D T++VW D G + V
Sbjct: 239 NWNANPIMGSAVLRGHEDHVITCMQIH--DDVLVTGSDDNTLKVWCIDKGEVMYTLVGHT 296
Query: 176 DDIL--RLSQM-------NTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSG 222
+ ++SQ +TD ++ VD + + L+GH V A ++ +V+G
Sbjct: 297 GGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI--LVTG 354
Query: 223 ADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ D +++W + + + TL GH V CV F +VS D ++++W+
Sbjct: 355 SRDTTLRVWDVESGR--HLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC 410
Query: 283 VQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLER 320
++T ++R + L E +++ +G D+ + V+ R
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 256 (95.2 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 81/296 (27%), Positives = 134/296 (45%)
Query: 40 MGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTV 99
MG+ + R E D + + H + V+G DD +KVW ++TL+GH + T
Sbjct: 246 MGSAVLRGHE-DHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTS 302
Query: 100 QFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTV 159
Q +IVS S D+T+++W+ + + L GH V C + ++V+ S D T+
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSRDTTL 360
Query: 160 RVWDIGALRK-KTVSPADDILRLSQMN--TDLFGGVDAVVKY----------VLEGHDRG 206
RVWD+ + R T+ +R Q + T + GG D VK L GH+
Sbjct: 361 RVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR 420
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVS 265
V F ++ SG+ D +++W + E V L+GH + S + +I+VS
Sbjct: 421 VYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG--NILVS 478
Query: 266 NSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI-VFKLER 320
+ D +RVWD+ + T V L N++A D G + ++ +ER
Sbjct: 479 CNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIER 533
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 67/222 (30%), Positives = 99/222 (44%)
Query: 76 KVWNYKMHRCLFTLLGHLDYIRT-VQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
K WN L GH D++ T +Q H + +V+ SDD T+++W + L GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHDDV--LVTGSDDNTLKVWCIDKGEVMYTLVGH 295
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--G 190
V + +VS S D+TV+VW G+L T+ +R M + G
Sbjct: 296 TGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH-TLQGHTSTVRCMAMAGSILVTG 354
Query: 191 GVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
D ++ L GH V F T +VSG D VK+W + +
Sbjct: 355 SRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC-- 410
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL GH N V ++F +++ I+ S S D SIRVWD T+ G
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEG 452
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 65/225 (28%), Positives = 103/225 (45%)
Query: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+I++ +++W G+L+ H VR + S + V+G D ++VW+ +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVES 367
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L TL GH +R VQF + +VS D T++IWN + CI LTGHN+ V
Sbjct: 368 GRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLL 425
Query: 143 FHPKEDLVVSASLDQTVRVWD---------IGALRKKTVSPADDILR---LSQMNTDLFG 190
F + +V S SLD ++RVWD + L+ T + LR L N D
Sbjct: 426 FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHV 485
Query: 191 GV----DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
V + ++L GH + + ++ + +DD VKLW
Sbjct: 486 RVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLW 529
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/263 (23%), Positives = 120/263 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+++W G ++ H G V + VSG D +KVW+ L TL GH
Sbjct: 278 LKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGH 337
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R + +V+ S D T+R+W+ +S ++ L GH+ V C F VVS
Sbjct: 338 TSTVRCMAMAGSI--LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT--VVS 393
Query: 153 ASLDQTVRVWDIGALRK-KTVSPADD----ILRLSQMNTDLFGGVDAVVKYVLEGHDRGV 207
D TV++W+ R +T++ ++ +L S+ + G +D ++ G
Sbjct: 394 GGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQ 453
Query: 208 NWAAF---HPTLP--------LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
A H +L ++VS D V++W ++E V L GH + ++ + +
Sbjct: 454 ECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTC--VHMLSGHRSAITSLQW 511
Query: 257 HAKQDIIVSNSEDKSIRVWDVTK 279
+ +++ ++S+D ++++WD+ +
Sbjct: 512 FGR-NMVATSSDDGTVKLWDIER 533
Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 54/219 (24%), Positives = 104/219 (47%)
Query: 121 NWQSRTCI--SVLTGH-NHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPA 175
NW + + +VL GH +H + C H +D++V+ S D T++VW D G + V
Sbjct: 239 NWNANPIMGSAVLRGHEDHVITCMQIH--DDVLVTGSDDNTLKVWCIDKGEVMYTLVGHT 296
Query: 176 DDIL--RLSQM-------NTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSG 222
+ ++SQ +TD ++ VD + + L+GH V A ++ +V+G
Sbjct: 297 GGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI--LVTG 354
Query: 223 ADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ D +++W + + + TL GH V CV F +VS D ++++W+
Sbjct: 355 SRDTTLRVWDVESGR--HLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC 410
Query: 283 VQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLER 320
++T ++R + L E +++ +G D+ + V+ R
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 255 (94.8 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 84/287 (29%), Positives = 133/287 (46%)
Query: 18 HSKRPWILASLHSGVIQL-W---DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDY 73
HS PW A + I W + R ++ D+H + + F ++ VSG DD
Sbjct: 270 HS--PWKSAYIRQHRIDTNWRRGELRSPKVLKGHDDH--VITCLQFCGNR--IVSGSDDN 323
Query: 74 KIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTG 133
+KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++ CI L G
Sbjct: 324 TLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYG 381
Query: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMNTD--LFG 190
H V C H K VVS S D T+RVWDI + V +R Q + + G
Sbjct: 382 HTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 439
Query: 191 GVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 440 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNC-- 495
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ TL GH + S + K +I+VS + D ++++WD+ +QT +
Sbjct: 496 IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 540
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 73/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 309 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 364
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 365 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 422
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 423 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 478
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 479 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 535
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ +TG
Sbjct: 536 -LQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--KTG 576
Score = 170 (64.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 40/156 (25%), Positives = 77/156 (49%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + + +R +++ + ++++WD T + H V + F VSG
Sbjct: 426 VRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSL 481
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D I+VW+ + C+ TL GH ++ +VS + D T++IW+ ++ C+ L
Sbjct: 482 DTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTL 539
Query: 132 TG---HNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
G H V C F+ ++ V+++S D TV++WD+
Sbjct: 540 QGPSKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 573
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 268 FIHS-PW-KSAYIRQHRIDTNWRRGELRSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 323
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 324 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 382
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 383 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 436
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 437 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 491
Score = 140 (54.3 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+NRV L F + SL + I++WD G I H G+ + + VS
Sbjct: 463 TNRVYSLQFDGIHV-VSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVS 518
Query: 69 GGDDYKIKVWNYKMHRCLFTLLG---HLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
G D +K+W+ K +CL TL G H + +QF+ + ++++SDD T+++W+
Sbjct: 519 GNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWD 572
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 196 (74.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 43/150 (28%), Positives = 78/150 (52%)
Query: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
W++ H G ++ W M + + H +RG+ F + FVSG DD +++W++
Sbjct: 202 WMVTGDHGGYVKYWQSNMNN-VKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMR 260
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDD--QTIRIWNWQSRTCISVLTGHNHYVMC 140
+ L GH ++ V +H + IVS S D Q I+IW+ +S ++ L H VM
Sbjct: 261 CQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMD 320
Query: 141 ASFHPKEDLVVSASLDQTVRVWDIGALRKK 170
++ + +V+AS D ++++DI LR++
Sbjct: 321 LKWNDNGNWLVTASRDHLLKLFDIRNLREE 350
Score = 183 (69.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHDGPVRGVHFHKSQ 63
++ ++G+SF ++ G +++WD+ M +R H V+ VH+H +
Sbjct: 225 YQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDF-MRCQEERVLRGHGADVKCVHWHPQK 283
Query: 64 PLFVSGGDDYK--IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ VSG D + IK+W+ K L TL H + ++++ W+V+AS D +++++
Sbjct: 284 GMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFD 343
Query: 122 WQS-RTCISVLTGHNHYVMCASFHP-KEDLVVSASLDQTVRVWDIG 165
++ R + V GH S+HP E L S D ++ W++G
Sbjct: 344 IRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVG 389
Score = 161 (61.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 46/168 (27%), Positives = 77/168 (45%)
Query: 3 TKF-ETKSNRVK----GLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGV 57
T+F +T +N+++ L++ + ++ SG LW+ HD VR +
Sbjct: 135 TRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTM 194
Query: 58 HFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTI 117
+ + V+G +K W M+ H + IR + F VS SDD T+
Sbjct: 195 VWSHNDSWMVTGDHGGYVKYWQSNMNNVKM-YQAHKEAIRGISFSPTDSKFVSGSDDGTL 253
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLD--QTVRVWD 163
RIW++ VL GH V C +HP++ ++VS S D Q +++WD
Sbjct: 254 RIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWD 301
Score = 134 (52.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 53/243 (21%), Positives = 91/243 (37%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
V+G + +WN L H +RT+ + H W+V+ ++ W +
Sbjct: 162 VTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQ-SNMN 220
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV--SPADDILRLS-- 182
+ + H + SF P + VS S D T+R+WD +++ V D+ +
Sbjct: 221 NVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWH 280
Query: 183 -QMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP----TLPL--------IVSGADDRQVK 229
Q + G D + G+ A H + L +V+ + D +K
Sbjct: 281 PQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLK 340
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHA-KQDIIVSNSEDKSIRVWDVTKRTGVQTFRR 288
L+ + + EV RGH S V +H + + S D SI W+V +
Sbjct: 341 LFDIRNLRE-EVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVET 399
Query: 289 EHD 291
HD
Sbjct: 400 AHD 402
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 52/227 (22%), Positives = 93/227 (40%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+V+ + +WN + ++L H+ V + + +V+ V+ W
Sbjct: 161 LVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMN 220
Query: 168 RKKTVSPADDILR-LSQMNTD---LFGGVDAVVKY----------VLEGHDRGVNWAAFH 213
K + +R +S TD + G D ++ VL GH V +H
Sbjct: 221 NVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWH 280
Query: 214 PTLPLIVSGADDRQ--VKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
P +IVSG+ D Q +K+W A + TL H + V + ++ + +V+ S D
Sbjct: 281 PQKGMIVSGSKDNQQPIKIWDPKSGIA--LATLHAHKSTVMDLKWNDNGNWLVTASRDHL 338
Query: 272 IRVWDVTK-RTGVQTFRREHDRFWILASHP-EMNLLAAGHDSGMIVF 316
++++D+ R VQ FR ++ HP L +G G I+F
Sbjct: 339 LKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILF 385
Score = 114 (45.2 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 32/107 (29%), Positives = 48/107 (44%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA-KQDIIVSNSEDKSIRVWDV 277
+V+ + D +KL+ + + EV RGH S V +H + + S D SI W+V
Sbjct: 330 LVTASRDHLLKLFDIRNLRE-EVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNV 388
Query: 278 TKRTGVQTFRREHDRF-WILASHPEMNLLAAGHDSGMIVFKLERERP 323
+ HD W LA HP ++L +G + I F R RP
Sbjct: 389 GTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKF-WTRNRP 434
Score = 71 (30.1 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 191 GVDAVVKYVLEGHDRGVNWA-AFHPTLPLIVSGADDRQVKLWRMN 234
G D + V HD + W A+HP ++ SG++D +K W N
Sbjct: 389 GTDKEIGCVETAHD-SIVWTLAWHPLGHILCSGSNDHTIKFWTRN 432
Score = 39 (18.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 709 YLITGNMDKLSKMLKIAEVKNDV 731
+L+T + D L K+ I ++ +V
Sbjct: 329 WLVTASRDHLLKLFDIRNLREEV 351
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 525 TLH-ETIRVKSGAWDDNGVFIYT-TLNHI 551
TLH V W+DNG ++ T + +H+
Sbjct: 310 TLHAHKSTVMDLKWNDNGNWLVTASRDHL 338
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 250 (93.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 77/278 (27%), Positives = 130/278 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEY-PWI 108
H P+ V +KS F++G D K+W+ L TL GH + + + F++ Y I
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GA 166
+ S D+T ++W+ ++ C GH ++C SF+P+ LV + S+D T ++WDI G
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE 210
Query: 167 LRKKTVSPADDILRLSQMNTD----LFGGVD-AVVKY---------VLEGHDRGVNWAAF 212
+ +I+ LS NT + G D VV + +L GH ++ A+F
Sbjct: 211 EVYTLRGHSAEIISLS-FNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASF 269
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV--SCVMFHAKQDIIVSNSEDK 270
+ LI++G+ D+ KLW K V TL GH + + SC + K +I + S D
Sbjct: 270 NWDCSLILTGSMDKTCKLWDATNGKC--VATLTGHDDEILDSCFDYTGK--LIATASADG 325
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ R++ R + ++ +P+ N L G
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTG 363
Score = 239 (89.2 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 71/292 (24%), Positives = 126/292 (43%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ-PLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+LWD G ++ + H V + F+ +G D K+W+ + +C T GH
Sbjct: 117 KLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGH 176
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I + F+ + + + S D T ++W+ Q+ + L GH+ ++ SF+ D +++
Sbjct: 177 TAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIIT 236
Query: 153 ASLDQTVRVWDIGALRKKTV--SPADDILRLSQMNTD----LFGGVDAVVKY-------- 198
S D TV VWD RK + +I S N D L G +D K
Sbjct: 237 GSFDHTVVVWDADTGRKVNILIGHCAEISSAS-FNWDCSLILTGSMDKTCKLWDATNGKC 295
Query: 199 --VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
L GHD + + F T LI + + D +++ K + L GH +S + F
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKC--IAKLEGHEGEISKISF 353
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + +++ S DK+ R+WD +Q D + A + + N++ G
Sbjct: 354 NPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITG 405
Score = 236 (88.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/292 (22%), Positives = 132/292 (45%)
Query: 2 LTKFETKSNRVKGLSFHSKRPW---ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L E N V ++F++ P+ I +LW G F H + +
Sbjct: 127 LNTLEGHRNVVYAIAFNN--PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
F+ L +G D K+W+ + ++TL GH I ++ F+ I++ S D T+
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV 244
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPAD 176
+W+ + +++L GH + ASF+ L+++ S+D+T ++WD G D
Sbjct: 245 VWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDD 304
Query: 177 DILR---------LSQMNTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA 223
+IL ++ + D +F LEGH+ ++ +F+P +++G+
Sbjct: 305 EILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGS 364
Query: 224 DDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
D+ ++W + +V L GH + + F+ K +I+++ S+D + R+W
Sbjct: 365 SDKTARIWDAQTGQCLQV--LEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 59/234 (25%), Positives = 108/234 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
LSF+ + + +LWD + G + H + + F+ S ++G D+
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHT 242
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+ VW+ R + L+GH I + F+ + I++ S D+T ++W+ + C++ LTGH
Sbjct: 243 VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGH 302
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK---KTVSPADDILRLS---QMNTDL 188
+ ++ + F L+ +AS D T R++ A RK K +I ++S Q N L
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFS-AATRKCIAKLEGHEGEISKISFNPQGNHLL 361
Query: 189 FGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
G D + VLEGH + AF+ ++++G+ D ++WR
Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 86 LFTLL-GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
LF +L H+ + V + ++ S D+T ++W+ S ++ L GH + V +F+
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 145 -PKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNTDLFGGVDAVVK- 197
P D + + S D+T ++W + G +I+ LS Q G +D K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 198 ---------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
Y L GH + +F+ + I++G+ D V +W + + +V+ L GH
Sbjct: 204 WDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGR--KVNILIGHC 261
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
+S F+ +I++ S DK+ ++WD T V T HD
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG-HD 303
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 254 (94.5 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 73/234 (31%), Positives = 113/234 (48%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG DD +KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++
Sbjct: 275 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 332
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMN 185
CI L GH V C H K VVS S D T+RVWDI + V +R Q +
Sbjct: 333 CIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 390
Query: 186 TD--LFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+ G D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 391 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDV 448
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ TL GH + S + K +I+VS + D ++++WD+ +QT +
Sbjct: 449 ETGNC--IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 498
Score = 240 (89.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 73/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 267 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 322
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 323 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 380
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 381 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 436
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 437 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 493
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ +TG
Sbjct: 494 -LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--KTG 534
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 226 FIHS-PW-KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 281
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 282 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 340
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 341 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 394
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 395 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 449
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 191 (72.3 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 47/163 (28%), Positives = 80/163 (49%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM-HR 84
AS+ +I LW +LI R++ H + + + S DD +++W+ + +
Sbjct: 61 ASVDKTMI-LWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE 119
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
CL L GH +++ V F+ IVS S D+TIRIW ++ C+ ++ H+ + F+
Sbjct: 120 CLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN 179
Query: 145 PKEDLVVSASLDQTVRVWDI--GALRKKTV---SPADDILRLS 182
L+VSAS D + ++WD G K + SPA + S
Sbjct: 180 RDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFS 222
Score = 189 (71.6 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 37/116 (31%), Positives = 62/116 (53%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H + V F L S D + +W+ + + GH I + + + +
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTC 101
Query: 110 SASDDQTIRIWNWQSR-TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SASDD T+RIW+ +S C+ VL GH ++V C +F+P +L+VS S D+T+R+W++
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 44/162 (27%), Positives = 78/162 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V ++F+ I++ I++W+ + G + H P+ VHF++ L VS
Sbjct: 128 TNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVS 187
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D K+W+ K CL TL+ + +F +I+ A+ D T+++ N+ +
Sbjct: 188 ASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKF 247
Query: 128 ISVLTGHNHYVMC--ASFHPKED-LVVSASLDQTVRVWDIGA 166
+ V TGH + V C ++F +VS S D V +WD+ A
Sbjct: 248 LKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQA 289
Score = 169 (64.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 43/163 (26%), Positives = 79/163 (48%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHDGPVRGVHF 59
++ ++E S+ + L++ S + ++ +++WD R + H V V+F
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF 136
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VSG D I++W K +C+ + H I +V F+ + IVSAS D + +I
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 120 WNWQSRTCISVLTGHNH-YVMCASFHPKEDLVVSASLDQTVRV 161
W+ + TC+ L V A F P ++ A+LD T+++
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/159 (27%), Positives = 76/159 (47%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP--LFVSG 69
+ + F+ I+++ H G ++WD + GT + + P V F K P F+
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA--VSFAKFSPNGKFILV 230
Query: 70 GD-DYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFH-HEYPWIVSASDDQTIRIWNWQSR 125
D +K+ NY + L GH + + T F +IVS S+D + +W+ Q+R
Sbjct: 231 ATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQAR 290
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSAS--LDQTVRVW 162
+ L GH V+ S HP ++ + S+ LD+T+R+W
Sbjct: 291 NILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 149 (57.5 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 47/174 (27%), Positives = 78/174 (44%)
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW---DIGALRKKT--VSPADDILRLS 182
+ L GH + C F +L+ SAS+D+T+ +W + + + S D+ S
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 183 QMNTDLFGGVDAVVK-------Y----VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
+ D ++ Y VL GH V F+P LIVSG+ D +++W
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 232 RMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
+ K V ++ H +S V F+ +IVS S D S ++WD + T ++T
Sbjct: 156 EVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Score = 115 (45.5 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 80 YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
YK +R L TL GH I V+F ++ + SAS D+T+ +W+ + + I GH+ +
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 140 CASFHPKEDLVVSASLDQTVRVWDIGALRK--KTVSPADDILRLSQMN--TDLF--GGVD 193
++ SAS D T+R+WD + + K + + + N ++L G D
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 194 AVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
++ +++ H ++ F+ LIVS + D K+W E
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Score = 102 (41.0 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 32/115 (27%), Positives = 51/115 (44%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ V++A F P I+ D +KL K +V T GH N V C+
Sbjct: 205 LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYT--GHTNKVFCIT 262
Query: 256 --FHAKQD-IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
F IVS SED + +WD+ R +Q D ++ HP N +++
Sbjct: 263 SAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISS 317
Score = 100 (40.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
LEGH ++ F L+ S + D+ + LW + T + GH + +S + + +
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILW--SATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS-HPEMNLLAAG 308
S S+D ++R+WD R H F + +P NL+ +G
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSG 146
Score = 90 (36.7 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 38/109 (34%), Positives = 50/109 (45%)
Query: 172 VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNW--AAFHPTL-PLIVSGADDRQV 228
V+ D L+LS T F +K V GH V +AF T IVSG++D V
Sbjct: 230 VATLDSTLKLSNYATGKF------LK-VYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCV 282
Query: 229 KLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS--NSEDKSIRVW 275
LW + + L GH + V V H Q+ I S N DK+IR+W
Sbjct: 283 YLWDLQARNI--LQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 69 (29.3 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 698 RTKNFERLSFLYLITGNMDK---LSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESA 754
+ N+ FL + TG+ +K ++ + K V G N +YL D++ R +
Sbjct: 238 KLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE 297
Query: 755 GHLPLAYITASVHGLQD 771
GH A I+ S H +Q+
Sbjct: 298 GHTD-AVISVSCHPVQN 313
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 249 (92.7 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 76/288 (26%), Positives = 127/288 (44%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ + + L F I + + +W+ + + RF H V V F S
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 65 LFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L S D +++W + K LF H +R+V F + +++ASDDQ+I++W+
Sbjct: 74 LLASSSRDKTVRLWVPSVKGESVLFR--AHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA--LRKKTVSPA--DDI 178
+ I L HN++V CA F P L+VS S D+TV++WD + L P
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSY 191
Query: 179 LRLSQMNTDLF-GGVDAVVK------YVL----EGHDRGVNWAAFHPTLPLIVSGADDRQ 227
+ +T + D V+ + L + H VN +FHP+ +++ + D
Sbjct: 192 VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDST 251
Query: 228 VKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
+K+ + E + + TL GH + SCV F D S D+ + VW
Sbjct: 252 LKILDLLEGRL--LYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 233 (87.1 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 64/246 (26%), Positives = 106/246 (43%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F + V + F + +S ++LW + F H G VR V F
Sbjct: 55 RFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADG 114
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
++ DD IK+W+ + + TL H +++R +F + +VS SDD+T+++W+
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
SR I Y FHP + +AS D TVRVWDI A+
Sbjct: 175 SRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNAL 234
Query: 171 TVSPADD-ILRLSQMNT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ P+ + +L S +T + ++ + Y L GH + +F + S D+QV
Sbjct: 235 SFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQV 294
Query: 229 KLWRMN 234
+WR N
Sbjct: 295 MVWRTN 300
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 64/295 (21%), Positives = 125/295 (42%)
Query: 42 TLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
TL F H + + F S SG D + VWN K + GH D + VQF
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ S+S D+T+R+W + + H V F +++AS DQ++++
Sbjct: 69 SPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 162 WDIGALRKK---TVSPADDILRLSQMNTD--LFGGV--DAVVKYVLEGHDRGV------- 207
W + R+K T+ ++ +R ++ + D L V D VK + + R +
Sbjct: 129 WSVH--RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVK-LWDASSRQLIHTFCEP 185
Query: 208 ----NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
++ FHP+ I + + D V++W + + + H V+ + FH + +
Sbjct: 186 GGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTL--LQHYQVHSAAVNALSFHPSGNHL 243
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILASHPEMNLLAAGHDSGMIVFK 317
++ S D ++++ D+ + + T + + S +AG D ++V++
Sbjct: 244 LTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWR 298
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 193 DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN-ETKAWEVDTLRGHMNNV 251
D ++ +GH + F P+ I SG+ D V +W M +++A+ GH + V
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYR---FTGHKDAV 63
Query: 252 SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW--ILASHPEMNLLAAGH 309
+CV F ++ S+S DK++R+W V G R H + S +LL A
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASD 122
Query: 310 DSGMIVFKLERER 322
D + ++ + R++
Sbjct: 123 DQSIKLWSVHRQK 135
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 254 (94.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 73/234 (31%), Positives = 113/234 (48%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG DD +KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++
Sbjct: 315 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 372
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMN 185
CI L GH V C H K VVS S D T+RVWDI + V +R Q +
Sbjct: 373 CIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430
Query: 186 TD--LFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+ G D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 431 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDV 488
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ TL GH + S + K +I+VS + D ++++WD+ +QT +
Sbjct: 489 ETGNC--IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 538
Score = 240 (89.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 73/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 307 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 362
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 363 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 420
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 421 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 476
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 477 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 533
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ +TG
Sbjct: 534 -LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--KTG 574
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 266 FIHS-PW-KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 321
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 322 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 380
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 381 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 434
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 435 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 489
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 254 (94.5 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 73/234 (31%), Positives = 113/234 (48%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG DD +KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++
Sbjct: 317 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 374
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMN 185
CI L GH V C H K VVS S D T+RVWDI + V +R Q +
Sbjct: 375 CIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432
Query: 186 TD--LFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+ G D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 433 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDV 490
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ TL GH + S + K +I+VS + D ++++WD+ +QT +
Sbjct: 491 ETGNC--IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 540
Score = 240 (89.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 73/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 309 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 364
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 365 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 422
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 423 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 478
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 479 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 535
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ +TG
Sbjct: 536 -LQTLQGPSKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--KTG 576
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 268 FIHS-PW-KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 323
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 324 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 382
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 383 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 436
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 437 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 491
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 212 (79.7 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 68/280 (24%), Positives = 118/280 (42%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
+ +H G V F ++ DD + VW K R L+ L GH +++ F +
Sbjct: 22 YGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGR 81
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-- 164
I S+S D +IR+W+ C+ VL GH V SF P + S D+ VW++
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 165 G-----------ALRKKTVSPADDILRLSQMNT-----DLFGGVDAVVKYVLEGHDRGVN 208
G +++ SP D L ++ DL V + LEGH ++
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNIS 201
Query: 209 WAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSE 268
+ + L+ SG+ D+ + +W+ T + L+GH V+ + F + + S
Sbjct: 202 CLCYSAS-GLLASGSWDKTICVWKPT-TNNLPLQ-LKGHTIWVNSLAFSPDELKLASAGY 258
Query: 269 DKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
++++VWD ++T + D P+ LL +G
Sbjct: 259 SRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298
Score = 211 (79.3 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 42/143 (29%), Positives = 67/143 (46%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
+L + G + +W + G L+ R H GPV+ F L S D+ I++W+
Sbjct: 41 LLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARS 100
Query: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
+CL L GH + TV F + + S D+ +W QS + +L GH + + F
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDF 160
Query: 144 HPKEDLVVSASLDQTVRVWDIGA 166
P D + + S D TV +WD+ A
Sbjct: 161 SPTSDSLATGSWDSTVHIWDLRA 183
Score = 154 (59.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 44/154 (28%), Positives = 65/154 (42%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
VK F I +S I+LWD + H V V F SGG
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGW 130
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT-CISV 130
D + VW + R + L+GH D I++ F + + S D T+ IW+ ++ T +S
Sbjct: 131 DKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY 190
Query: 131 --LTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
L GH + C + L+ S S D+T+ VW
Sbjct: 191 HNLEGHTGNISCLCYSAS-GLLASGSWDKTICVW 223
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDILR 180
H+ V C++F P +++AS D V VW G ++ SP ++
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 181 LSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
S + L+ + +VL+GH R V +F P + SG D++ +W + +
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR- 143
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRR-E-HDRFWIL 296
V L GH +++ F D + + S D ++ +WD+ T V ++ E H
Sbjct: 144 -RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISC 202
Query: 297 ASHPEMNLLAAGH-DSGMIVFK 317
+ LLA+G D + V+K
Sbjct: 203 LCYSASGLLASGSWDKTICVWK 224
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA-WEVDTLRGHMNNVSCVMFHAKQD 261
H VN +AF P +++ +DD V +W + W L GH V F
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWR---LAGHRGPVKSCCFSPDGR 81
Query: 262 IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLER 320
+I S+S D SIR+WDV + + + ++ P+ LA+G D IV++++
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 321 ERPAFAVSG--DSL 332
R + G DS+
Sbjct: 142 GRRVHLLVGHCDSI 155
Score = 68 (29.0 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L+GH VN AF P + S R VK+W K E TL+G ++ +F
Sbjct: 234 LKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLE--TLKGMLDVAHACIFTPD 291
Query: 260 QDIIVSNS 267
++VS +
Sbjct: 292 GKLLVSGA 299
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 254 (94.5 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 47/150 (31%), Positives = 76/150 (50%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
+ F+S ++A SG ++LWD ++ H + + FH SG D
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSN 128
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
IK+W+ + C+F GH +R + F + W+ SASDD T+++W+ + I+ T H
Sbjct: 129 IKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
V FHP E L+ S S D+TV++WD+
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 234 (87.4 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 65/242 (26%), Positives = 111/242 (45%)
Query: 50 HDGPVRGVHFHKSQP-LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H V + KS L +GG+D ++ +W C+ +L GH + +QF+ +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---G 165
V+ S ++R+W+ ++ + L GH + FHP + + S S+D +++WD+ G
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 166 AL-RKKTVSPADDILRLSQMNTDLFGGVD-AVVKY--VLEG--------HDRGVNWAAFH 213
+ R K + A L S L D + VK ++ G H VN FH
Sbjct: 139 CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFH 198
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P L+ SG+ DR VKLW + + + + G V V+F+ + S SE+ ++R
Sbjct: 199 PNEYLLASGSADRTVKLWDLEKFNM--IGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLR 255
Query: 274 VW 275
V+
Sbjct: 256 VY 257
Score = 217 (81.4 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 61/230 (26%), Positives = 108/230 (46%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + +D + IW CI LTGH V C F+ E+ VV+ SL ++R+WD+ A
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA 95
Query: 168 R-KKTV---SPADDILRLSQMNTDLFGG-VDAVVK----------YVLEGHDRGVNWAAF 212
+ +T+ + L M L G VD+ +K + +GH + V AF
Sbjct: 96 KILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P + S +DD VKLW + K + H + V+ V FH + ++ S S D+++
Sbjct: 156 SPDGKWLASASDDSTVKLWDLIAGKM--ITEFTSHTSAVNVVQFHPNEYLLASGSADRTV 213
Query: 273 RVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
++WD+ K + + E + +P+ + L +G ++ + V+ E +R
Sbjct: 214 KLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPDR 263
Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 37/132 (28%), Positives = 65/132 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ +W I H V + F+ S+ V+G +++W+ + + L TL+GH
Sbjct: 45 VNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH V C +F P + S
Sbjct: 105 KASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDI 164
AS D TV++WD+
Sbjct: 165 ASDDSTVKLWDL 176
Score = 169 (64.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 38/169 (22%), Positives = 79/169 (46%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+++ + V+ L+F W+ ++ ++LWD G +I F H V V FH ++
Sbjct: 142 RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D +K+W+ + + + G +R+V F+ + + S S++ T+R++ W+
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWE 260
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW---DIGALRK 169
C V+ H + + + +++ S T W D+ ++K
Sbjct: 261 PDRCFDVV--HVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKK 307
Score = 164 (62.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 40/152 (26%), Positives = 67/152 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
+ L FH ++ + I+LWD R + R+ H VR + F S D
Sbjct: 108 ISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASD 167
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRTCISV 130
D +K+W+ + + H + VQFH +EY + S S D+T+++W+ + I
Sbjct: 168 DSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEY-LLASGSADRTVKLWDLEKFNMIGS 226
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
G V F+P + S S + T+RV+
Sbjct: 227 SEGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 126 (49.4 bits), Expect = 0.00035, P = 0.00035
Identities = 29/113 (25%), Positives = 58/113 (51%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G +D +V +W +++ + +L GH + V C+ F++ ++ +V+ S S+R+WD+
Sbjct: 35 LLATGGEDCRVNIWAVSKPNC--IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL 92
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLERERPAFAVSG 329
++T L HP LA+G DS + ++ + R+ F G
Sbjct: 93 EAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKG 145
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 253 (94.1 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 88/319 (27%), Positives = 143/319 (44%)
Query: 16 SFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS-QPLFVSGGDDYK 74
S H +I+ASL + I ++D T + +G V GV + VSGG D +
Sbjct: 258 SLHLTPKYIVASLDNAKIHVYD----TNGENQKTLEGHVMGVWAMVPWDNILVSGGCDRE 313
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
++VWN ++ L GH +R ++ + +S S D T+RIW+ ++ TC SVL GH
Sbjct: 314 VRVWNMATGESIYLLRGHTSTVRCLKMSDKNT-AISGSRDTTLRIWDLRTGTCRSVLVGH 372
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTDLF-GG 191
V C + H D+VVS S D T RVW I G + I ++ + G
Sbjct: 373 QASVRCLAVHG--DIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGS 430
Query: 192 VDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
+D V+ +L+GH V + +V+G D V++W + T+ +
Sbjct: 431 LDTSVRIWDPNTGQCHAILQGHTSLVG--QLQMSGDTLVTGGSDGSVRVWSL--TRMAPI 486
Query: 242 DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG--VQTFRREHDRFWILASH 299
L H N+V+ + F + IVS D ++VW + RTG ++ D W +
Sbjct: 487 HRLAAHDNSVTSLQFDNNR--IVSGGSDGRVKVWCL--RTGQLLRELSTPSDTVWRVTFE 542
Query: 300 PEMNLLAAGHDSGMIVFKL 318
E ++ + SG V ++
Sbjct: 543 EEKAVIMSSR-SGRTVMEV 560
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 187 (70.9 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 45/167 (26%), Positives = 80/167 (47%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E +S+ + L+ + ++ HS I++WD I + H+GPV G+ H S L
Sbjct: 57 EGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGL 116
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPW--IVSASDDQTIRIWNWQ 123
+ G D K+ VW+ C GH + ++ FH + ++S SDD T+R+W+
Sbjct: 117 LATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN 176
Query: 124 SRT----CISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWDI 164
++ C++++ H+ S ED + SA D+ V +WD+
Sbjct: 177 AKNTEKKCLAIM--EKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 173 (66.0 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 42/164 (25%), Positives = 80/164 (48%)
Query: 74 KIKVWNYKMHRCLFTLLGHLDYIRTVQF---HHEYPWIVSASDDQTIRIWNWQSRTCISV 130
+++V++ C + L GH + + ++ IV+ S D+T+R+WN S++CI V
Sbjct: 382 EVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV 441
Query: 131 LTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLF 189
TGHN ++ +F K VS S D+T++VW + + + + P
Sbjct: 442 GTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEP--------------- 486
Query: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
++ + V+ HD+ +N A L+ +G++DR +WR+
Sbjct: 487 --INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Score = 145 (56.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 43/151 (28%), Positives = 70/151 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L S G +I+VW+ + +C+ + GH + + H + +A D+ + +W+
Sbjct: 74 LLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDG 133
Query: 125 RTCISVLTGHNHYVMCASFHP--KEDLVVSASLDQTVRVWDIGA--LRKKTVS------P 174
C GH V FHP +++++S S D TVRVWD+ A KK ++
Sbjct: 134 GFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFS 193
Query: 175 ADDILRLSQMNTDLFG-GVDAVVKYVLEGHD 204
A + LS+ LF G D VV + + HD
Sbjct: 194 AVTSIALSEDGLTLFSAGRDKVVN-LWDLHD 223
Score = 142 (55.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
HD + V ++ L +G +D +W + TL GH I +V+F ++
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
+AS D+T++IW +C+ GH V+ ASF VS D +++W++
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSEC 617
Query: 170 -KTVSPADD-ILRLSQ-MNTDLF--GGVDAVV 196
T +D + L+ T++ GG DAV+
Sbjct: 618 IATYDQHEDKVWALAVGKKTEMIATGGGDAVI 649
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 46/181 (25%), Positives = 76/181 (41%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHF-HKSQPLFVSGGDDYKIKVWNYK---------M 82
++LW+ + I H+G + V F KS FVSG D +KVW+ +
Sbjct: 428 VRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPI 487
Query: 83 H-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
+ + + H I +V + + S+D+T IW + L GH +
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 142 SFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMN--TDLFG-GVDAVV 196
F + V++AS D+TV++W I G+ K +LR S + T G D ++
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLL 607
Query: 197 K 197
K
Sbjct: 608 K 608
Score = 122 (48.0 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 193 DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
D V L+GH R + F +++ + D+ VK+W +++ + T GH ++V
Sbjct: 530 DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC--LKTFEGHTSSVL 587
Query: 253 CVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSG 312
F VS D +++W+V + T+ + D+ W LA + ++A G
Sbjct: 588 RASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDA 647
Query: 313 MI 314
+I
Sbjct: 648 VI 649
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/117 (29%), Positives = 58/117 (49%)
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH--A 258
+GH+ V A H + L+ + DR+V +W ++ + RGH VS ++FH +
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDG--GFCTHYFRGHKGVVSSILFHPDS 156
Query: 259 KQDIIVSNSEDKSIRVWDVT-KRTGVQTFRREHDRFW----ILASHPEMNLLAAGHD 310
++I++S S+D ++RVWD+ K T + F I S + L +AG D
Sbjct: 157 NKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRD 213
Score = 114 (45.2 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH--KSQPLFVSG 69
V G++ H+ + + + +WD G F H G V + FH ++ + +SG
Sbjct: 105 VMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISG 164
Query: 70 GDDYKIKVW--NYKM--HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
DD ++VW N K +CL + H + ++ + + SA D+ + +W+
Sbjct: 165 SDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDY 224
Query: 126 TC 127
+C
Sbjct: 225 SC 226
Score = 103 (41.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHE-YPWIVSASDDQTIRIWNWQ 123
L V+G D +++WN C+ GH I V F + + + VS S D+T+++W+
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
Query: 124 -----SRTCI-----SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
S I SV+ H+ + + + LV + S D+T +W
Sbjct: 478 GISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIW 526
Score = 101 (40.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
T+ G D + + + + SA + IR+W+ ++ CI GH VM + H
Sbjct: 55 TIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG 114
Query: 148 DLVVSASLDQTVRVWDI 164
L+ +A D+ V VWD+
Sbjct: 115 GLLATAGADRKVLVWDV 131
Score = 62 (26.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 100 QFHHEYPWIVSASDD-------QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
QF+ P+IVS+ I I + + S + G + + + P + L+ S
Sbjct: 18 QFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFS 77
Query: 153 ASLDQTVRVWDIGALR 168
A + +RVWD+ L+
Sbjct: 78 AGHSRQIRVWDLETLK 93
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 254 (94.5 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 73/234 (31%), Positives = 113/234 (48%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG DD +KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++
Sbjct: 395 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 452
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMN 185
CI L GH V C H K VVS S D T+RVWDI + V +R Q +
Sbjct: 453 CIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 510
Query: 186 TD--LFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+ G D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 511 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDV 568
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ TL GH + S + K +I+VS + D ++++WD+ +QT +
Sbjct: 569 ETGNC--IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 618
Score = 240 (89.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 73/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 387 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 442
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 443 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 500
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 501 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 556
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 557 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 613
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ +TG
Sbjct: 614 -LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--KTG 654
Score = 146 (56.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 346 FIHS-PW-KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 401
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 402 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 460
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 461 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 514
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 515 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 569
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 254 (94.5 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 73/234 (31%), Positives = 113/234 (48%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG DD +KVW+ +CL TL+GH + + Q I+S S D+T+++WN ++
Sbjct: 400 VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGE 457
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD-DILRLSQMN 185
CI L GH V C H K VVS S D T+RVWDI + V +R Q +
Sbjct: 458 CIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 515
Query: 186 TD--LFGGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
+ G D +VK + L+GH V F +VSG+ D +++W +
Sbjct: 516 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDV 573
Query: 234 NETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ TL GH + S + K +I+VS + D ++++WD+ +QT +
Sbjct: 574 ETGNC--IHTLTGHQSLTSGM--ELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 623
Score = 240 (89.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 73/286 (25%), Positives = 133/286 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L F R I++ +++W G + H G V + + +SG D
Sbjct: 392 LQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 447
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+KVWN + C+ TL GH +R + H + +VS S D T+R+W+ ++ C+ VL GH
Sbjct: 448 LKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGH 505
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LF 189
V C + + VVS + D V+VWD T+ + R+ + D +
Sbjct: 506 VAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQFDGIHVVS 561
Query: 190 GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
G +D ++ + L GH + + +VSG D VK+W + +
Sbjct: 562 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC- 618
Query: 240 EVDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG 282
+ TL+G H + V+C+ F+ ++ ++++S+D ++++WD+ +TG
Sbjct: 619 -LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL--KTG 659
Score = 146 (56.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 62/236 (26%), Positives = 102/236 (43%)
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCIS--VLTGHN-HYVMCASFHPKEDLVVSASLDQ 157
F H PW SA Q NW+ S VL GH+ H + C F +VS S D
Sbjct: 351 FIHS-PW-KSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDN 406
Query: 158 TVRVWDI--GALRKKTVSPADDILRLSQMNTDLF--GGVDAVVK----------YVLEGH 203
T++VW G + V + SQM ++ G D +K + L GH
Sbjct: 407 TLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 465
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
V H +VSG+ D +++W + + V L GH+ V CV + ++ +
Sbjct: 466 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRR--V 519
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
VS + D ++VWD T + T + +R + L +++++ D+ + V+ +E
Sbjct: 520 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QFDGIHVVSGSLDTSIRVWDVE 574
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 250 (93.1 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 85/295 (28%), Positives = 135/295 (45%)
Query: 33 IQLWDYRMGTLI-DRFDEHDGPVRGVHF---H---KSQP-LFVSGGDDYKIKVWNYKMHR 84
I+ WD + G+ I D H P+ + + H S P L SG D +++WN K+
Sbjct: 201 IRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRT 260
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
LFTL GH I V++ + WI S+S D+TIRIW+ + C+ +L GH V S
Sbjct: 261 LLFTLSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLS 319
Query: 145 PKEDLVVSASLDQT-VRVWDIGALRKKTVSPADDIL-----RLSQMNTDL---FGGVDAV 195
E ++ S + D T + R+K + L RL + DL
Sbjct: 320 T-EHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKS 378
Query: 196 VKYV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
K + + GH + VN A+F P I + + D V+LW K + TLRGH+ V
Sbjct: 379 TKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKF--LATLRGHVAAVYQ 436
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ ++VS+S+D +++VWDV + D+ + + P+ +A+G
Sbjct: 437 CAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASG 491
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 63/271 (23%), Positives = 109/271 (40%)
Query: 22 PWILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNY 80
P++LAS +++W+ ++ TL+ H P+ V + Q S D I++W+
Sbjct: 239 PYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWDA 297
Query: 81 KMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
K +CL L GH + + E+ A D + ++ Y C
Sbjct: 298 KDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDER----RKAKERYEAC 353
Query: 141 ASFHPKEDLVVSASLDQTVRVWD-------IGALR--KKTV-----SPADDILRLSQMNT 186
+ +VSAS D + +WD I + +K V SP + + ++
Sbjct: 354 LK--QSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDS 411
Query: 187 D--LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL 244
L+ G L GH V A+ L+VS + D +K+W + +K + D L
Sbjct: 412 SVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVR-SKKMKFD-L 469
Query: 245 RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
GH + V V + + S DK++R+W
Sbjct: 470 PGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 84 RCLFTLLGHLDYIRTVQFHHEYPW-IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
RC ++ GH I + QF +V+ S D T R+W+ ++T I+ + GH ++V C +
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
+ P ++ + S+D T+R WD K SP D LR
Sbjct: 185 WAPDASIIATGSMDNTIRFWD-----PKKGSPIGDALR 217
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/188 (28%), Positives = 88/188 (46%)
Query: 156 DQTVRVWD--IGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYV--LEGHDRGVNWAA 211
D+T+ + D ++ + +D L L +F V AV + + GHD + A
Sbjct: 83 DETIEIQDNLYTSVFHNGLMKTEDHLTLLYTPQAVFR-VRAVTRCTASMNGHDGTIISAQ 141
Query: 212 FHP-TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F P T +V+G+ D +LW +T+ + T++GH N VSCV + II + S D
Sbjct: 142 FSPSTSSRLVTGSGDFTARLWDC-DTQT-PIATMKGHTNWVSCVAWAPDASIIATGSMDN 199
Query: 271 SIRVWDVTKRTGVQTFRREHDR-----FWI-LASHPEMN--LLAAGH-DSGMIVFKLERE 321
+IR WD K + + R H + W L P+ LLA+G D+ + ++ ++
Sbjct: 200 TIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLR 259
Query: 322 RPAFAVSG 329
F +SG
Sbjct: 260 TLLFTLSG 267
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG-H 92
+LWD T I H V V + + +G D I+ W+ K + L H
Sbjct: 160 RLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRH 219
Query: 93 LDYIRTVQFH--HEYP-----WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
I + + H P + S S D T+RIWN + RT + L+GH + C +
Sbjct: 220 TKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGG 279
Query: 146 KEDLVVSASLDQTVRVWD 163
++ + S+S D+T+R+WD
Sbjct: 280 -QNWIYSSSYDKTIRIWD 296
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 50 HDGPVRGVHFHKS-QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
HDG + F S V+G D+ ++W+ + T+ GH +++ V + + I
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASII 192
Query: 109 VSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCASFHPKE---D----LVVSASLDQTVR 160
+ S D TIR W+ + + I L H +M + P D L+ S S D TVR
Sbjct: 193 ATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVR 252
Query: 161 VWDI 164
+W++
Sbjct: 253 IWNV 256
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 251 (93.4 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 68/242 (28%), Positives = 108/242 (44%)
Query: 50 HDGPVRGVHFHKSQP-LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H V + KS L +GGDD ++ VW+ C+ +L GH I ++Q + I
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---G 165
V+ S +IR+W+ ++ + L GH + FHP V S SLD +++WD+ G
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 166 ALRK-KTVSPADDILRLSQMNTDLFGGVD-----------AVVKYVLEGHDRGVNWAAFH 213
+ K K+ + A LR S L D V + GH VN FH
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH 198
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P+ L+ SG+ DR ++ W + K V + V C++F+ + +D S+R
Sbjct: 199 PSEYLLASGSSDRTIRFWDLE--KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLR 255
Query: 274 VW 275
V+
Sbjct: 256 VY 257
Score = 245 (91.3 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
++ L +K I+A SG I++WD ++ H + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F H +R ++F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
TGH+ V FHP E L+ S S D+T+R WD+
Sbjct: 186 TGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 64/232 (27%), Positives = 99/232 (42%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA- 166
+ + DD + +W+ C+ LTGH + KE+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 95
Query: 167 --LR-----KKTVSPAD-----DILRLSQMNTDL-FGGV---DAVVKYVLEGHDRGVNWA 210
LR K + D + ++TD+ V + KY + H + V
Sbjct: 96 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCL 153
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F P + S ADD VKLW + K T GH V+ V FH + ++ S S D+
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT--GHSGPVNVVEFHPSEYLLASGSSDR 211
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
+IR WD+ K V E + +P+ L G + V+ E ER
Sbjct: 212 TIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPER 263
Score = 187 (70.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ +W + H P+ + + L V+G I+VW+ + + L TLLGH
Sbjct: 45 VNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + CI H V C F P + S
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 170 (64.9 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 40/155 (25%), Positives = 69/155 (44%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R I ++ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
S DD+ +K+W+ + +F GH + V+FH + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHV 223
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + V C F+P + + ++RV+
Sbjct: 224 VSCIEEEATPVRCILFNP-DGCCLYGGFQDSLRVY 257
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K+++ + V+ L F W+ ++ ++LWD G ++ F H GPV V FH S+
Sbjct: 142 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D I+ W+ + + + +R + F+ + + D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWE 260
Query: 124 SRTCISVL 131
C V+
Sbjct: 261 PERCFDVV 268
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 202 (76.2 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 41/134 (30%), Positives = 71/134 (52%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I++WD GT F+ H G V + ++K + SG D I +W+ LF L
Sbjct: 86 GSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLR 145
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + + F +VS+S D+ +R+W+ +++ C+ +++GH+ V P+E V
Sbjct: 146 GHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYV 205
Query: 151 VSASLDQTVRVWDI 164
V+ S DQ +R + +
Sbjct: 206 VTGSADQELRFYAV 219
Score = 151 (58.2 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 53/232 (22%), Positives = 101/232 (43%)
Query: 30 SGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL 89
SGV+++ D T ++ H G + + + FV+ D+++K W Y++ +
Sbjct: 466 SGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKA 525
Query: 90 LGHLDY--IRTVQFHHEYPWIVSASD---------DQTIRIWNWQSRTCISVLTGHNHYV 138
L +++++ + + + + D D T++++ S L GH V
Sbjct: 526 TKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPV 585
Query: 139 MCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTD-LFG-GVD 193
MC +L+V+ S D+ +++W D G K + D ++ + + NT LF G D
Sbjct: 586 MCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKD 645
Query: 194 AVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
+VKY LEGH + A +V+G+ DR ++ W +E
Sbjct: 646 RLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE 697
Score = 108 (43.1 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 192 VDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN 250
+D++ Y+ L GH V LIV+G+ D+ +K+W ++ + ++ H ++
Sbjct: 569 MDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHK--SIFAHGDS 626
Query: 251 VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG-H 309
V V F + S +D+ ++ WD K + T H W LA + L G H
Sbjct: 627 VMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSH 686
Query: 310 DSGM 313
D M
Sbjct: 687 DRSM 690
Score = 90 (36.7 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F + V L ++ + + I LWD + + R H V + F
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGK 161
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
VS D ++VW+ + C+ + GH + +V E ++V+ S DQ +R +
Sbjct: 162 KLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 88 (36.0 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
H V F + S DR VK W + K + TL GH + C+ + D
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYW--DADKFEHLLTLEGHHAEIWCLAISNRGDF 680
Query: 263 IVSNSEDKSIRVWD 276
+V+ S D+S+R WD
Sbjct: 681 LVTGSHDRSMRRWD 694
Score = 79 (32.9 bits), Expect = 9.0e-15, Sum P(3) = 9.0e-15
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
A P I D VK++ M+ K + +L GH V C+ + ++IV+ S+DK
Sbjct: 547 AISPDAKHIAVALLDSTVKVFYMDSLKFYL--SLYGHKLPVMCIDISSDGELIVTGSQDK 604
Query: 271 SIRVW 275
++++W
Sbjct: 605 NLKIW 609
Score = 74 (31.1 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 17/79 (21%), Positives = 38/79 (48%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH +R+V + ++S S + ++IWN + +C+ + + Y +C+ P+
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTID--SGYGLCSLIVPQNKYG 460
Query: 151 VSASLDQTVRVWDIGALRK 169
+ + + + DIG+ K
Sbjct: 461 IVGTKSGVLEIIDIGSATK 479
Score = 71 (30.1 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 25/120 (20%), Positives = 47/120 (39%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR V + L +S ++K+WN CL T+ + ++Y +
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTIDSGYGLCSLIVPQNKYGIVG 463
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
+ S + I + S T + + H + + P + V+ S D V+ W+ +K
Sbjct: 464 TKSG--VLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQK 521
Score = 43 (20.2 bits), Expect = 9.8e-18, Sum P(3) = 9.8e-18
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 451 LPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRLV---LGDLQTPFVKYVV-WSNDMESVA 506
LP A +F + RA V DL+Q L+ D F+ Y+ WS E V
Sbjct: 785 LPNAV--MFGLSPSEYVLRAISNVRTNDLEQTLLALPFSD-SLKFLCYMKDWSLIPEKVE 841
Query: 507 LLSKHAIII 515
L+S+ A II
Sbjct: 842 LVSRIATII 850
Score = 38 (18.4 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 13/72 (18%), Positives = 28/72 (38%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
++V L F +++S +++WD + H V V + V+G
Sbjct: 149 DQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTG 208
Query: 70 GDDYKIKVWNYK 81
D +++ + K
Sbjct: 209 SADQELRFYAVK 220
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 245 (91.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 72/278 (25%), Positives = 128/278 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEY-PWI 108
H P+ V +K+ F++G D KVW+ L TL GH + + + F++ Y I
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
+ S D+T ++W+ ++ C GH ++C SF+P+ +V + S+D T ++WDI +
Sbjct: 151 ATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS-G 209
Query: 169 KKTVSPADDILRLSQMNTD------LFGGVDAVVK----------YVLEGHDRGVNWAAF 212
++ V+ + + ++ D + G D V + L GH ++ A F
Sbjct: 210 EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALF 269
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV--SCVMFHAKQDIIVSNSEDK 270
LI++G+ D+ LW K V TL GH + + SC + K +I + S D
Sbjct: 270 SWDCSLILTGSMDKTCMLWDATSGKC--VATLTGHDDEILDSCFDYTGK--LIATASADG 325
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ RV++ T R + ++ +P+ N L G
Sbjct: 326 TARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTG 363
Score = 234 (87.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 72/291 (24%), Positives = 125/291 (42%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ-PLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
++WD G + + H V + F+ +G D K+W+ + +C T GH
Sbjct: 117 KVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGH 176
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I + F+ + + + S D T ++W+ QS + LTGH ++ SF D +++
Sbjct: 177 TAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIIT 236
Query: 153 ASLDQTVRVWDIGALRK--KTVSPADDILR-LSQMNTDLF--GGVDAVV--------KYV 199
S D TV VWD RK + +I L + L G +D K V
Sbjct: 237 GSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCV 296
Query: 200 --LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
L GHD + + F T LI + + D +++ K + L GH +S + F+
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC--ITKLEGHEGEISKISFN 354
Query: 258 AKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++ S DK+ R+WDV +Q D + A + + N++ G
Sbjct: 355 PQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITG 405
Score = 219 (82.2 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 62/257 (24%), Positives = 121/257 (47%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHL 93
+LW G F H + + F+ + +G D K+W+ + + TL GHL
Sbjct: 160 KLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHL 219
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
I ++ F I++ S D T+ +W+ + + L GH + A F L+++
Sbjct: 220 AEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTG 279
Query: 154 SLDQTVRVWDIGALR-KKTVSPADD-ILR---------LSQMNTDLFGGV-DAVVKYV-- 199
S+D+T +WD + + T++ DD IL ++ + D V +A +
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCIT 339
Query: 200 -LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
LEGH+ ++ +F+P +++G+ D+ ++W + + +V L GH + + F+
Sbjct: 340 KLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQV--LEGHTDEIFSCAFNY 397
Query: 259 KQDIIVSNSEDKSIRVW 275
K +I+++ S+D S R+W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 211 (79.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 60/235 (25%), Positives = 109/235 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
LSF+ + + +LWD + G + H + + F S ++G D+
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHT 242
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+ VW+ R + TL+GH I + F + I++ S D+T +W+ S C++ LTGH
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD----DILRLS---QMNTD 187
+ ++ + F L+ +AS D T RV++ A +K ++ + +I ++S Q N
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARVYN--ATTRKCITKLEGHEGEISKISFNPQGNRL 360
Query: 188 LFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
L G D + VLEGH + AF+ ++++G+ D ++WR
Sbjct: 361 LTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/223 (25%), Positives = 96/223 (43%)
Query: 86 LFTLL-GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
LF +L H+ + V + ++ S D+T ++W+ S + L GH + V +F+
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 145 -PKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLS---QMNTDLFGGVDAVVKY 198
P D + + S D+T ++W + G +I+ LS Q G +D K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 199 ----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
L GH + +F + I++G+ D V +W + + +V TL GH
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGR--KVHTLIGHC 261
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
+S +F +I++ S DK+ +WD T V T HD
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTG-HD 303
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 247 (92.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GH V FHP E L+ S S D+T+R WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 218 (81.8 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 54/186 (29%), Positives = 86/186 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
S L D K + E GH VN FHP L+ SG+ DR ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 230 LWRMNE 235
W + +
Sbjct: 215 FWDLEK 220
Score = 206 (77.6 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R + R+ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + + GH + V+FH +EY + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQ 222
Query: 127 CISVLTG 133
+S + G
Sbjct: 223 VVSCIEG 229
Score = 142 (55.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 173 SPADDILRLSQMNTDLFGGVDAV-VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
+P + I+ SQ + ++A + L GH + FHP + SG+ D +KLW
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 232 RMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
+ V RGH V C+ F + S ++D ++++WD+T + F
Sbjct: 133 DIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 292 RFWILASHPEMNLLAAGHDSGMIVF-KLERERPAFAVSGD 330
++ HP LLA+G I F LE+ + + G+
Sbjct: 191 PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGE 230
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G DD +V LW +N+ + +L GH + V V + +++IV+ S+ SIRVWD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAG-HDSGMIVFKLERERPAFAVSGDS 331
++T L HP +A+G D+ + ++ + R+ F G S
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
++ S V+ L F W+ ++ ++LWD G ++ F H GPV V FH ++
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSAS 112
L SG D I+ W+ + + + + G +R + W+V S
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR-----YAGSWVVGLS 245
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L GH V + LIV+G+ +++W + K + TL GH N+ + FH
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPY 116
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHD 310
+ + S S+D +I++WD+ ++ V +R L P+ LA+ D
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 245 (91.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 64/258 (24%), Positives = 116/258 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ +W+ RF H + GV+F S L S D +++W + H
Sbjct: 42 LMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + +V+ASDD+++++W + + + L H ++V CA F P L+ S
Sbjct: 102 TASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIAS 161
Query: 153 ASLDQTVRVWDIGALRKKTV----SPADDILRLSQMNTDLFG-GVDAVVKY-------VL 200
D+TVR+WD + + + + + + T + G D +K ++
Sbjct: 162 CGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLI 221
Query: 201 EG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
+ H+ GVN +FHP+ ++SG+ D +K+ + E + + TL GH V V F
Sbjct: 222 QHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRL--IYTLHGHKGPVLTVTFS 279
Query: 258 AKQDIIVSNSEDKSIRVW 275
D+ S D + +W
Sbjct: 280 RDGDLFASGGADSQVLMW 297
Score = 240 (89.5 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 61/246 (24%), Positives = 104/246 (42%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+F ++ + G++F + +S ++LW + F H VR VHF +
Sbjct: 55 RFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDG 114
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+ DD +KVW + + L++L H +++R +F + I S DD+T+R+W+
Sbjct: 115 QRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTS 174
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK----KTVSPADDIL 179
S CI++ T + F+ + S+ D T+++WDI + K + +
Sbjct: 175 SHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCF 234
Query: 180 RLSQMNTDLFGGV-DAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
L G D+ +K Y L GH V F L SG D QV
Sbjct: 235 SFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQV 294
Query: 229 KLWRMN 234
+W+ N
Sbjct: 295 LMWKTN 300
Score = 203 (76.5 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 71/294 (24%), Positives = 125/294 (42%)
Query: 42 TLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
TL F H + F+ + +G D + +WN F +GH D I V F
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ S+S DQT+R+W + +V H V F +V+AS D++V+V
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 162 WDIGALRKK---TVSPADDILRLSQMNTD--LFG--GVDAVVK-YVLEGH-------DRG 206
W G RKK +++ + +R ++ + D L G D V+ + H D G
Sbjct: 129 W--GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYG 186
Query: 207 --VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIV 264
+ F+ + I S D +K+W + K + + H V+C FH + ++
Sbjct: 187 GSATFVDFNSSGTCIASSGADNTIKIWDIRTNKL--IQHYKVHNAGVNCFSFHPSGNYLI 244
Query: 265 SNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFK 317
S S D +I++ D+ + + T + + +L A+G DS ++++K
Sbjct: 245 SGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F+ + V+ + F ++ + +++W + + H VR F
Sbjct: 96 TVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPD 155
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L S GDD +++W+ H+C+ + V F+ I S+ D TI+IW+
Sbjct: 156 GRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDI 215
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILR 180
++ I HN V C SFHP + ++S S D T+++ D+ G L +L
Sbjct: 216 RTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLT 275
Query: 181 LS-QMNTDLF--GGVDAVV 196
++ + DLF GG D+ V
Sbjct: 276 VTFSRDGDLFASGGADSQV 294
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 247 (92.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GH V FHP E L+ S S D+T+R WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 64/226 (28%), Positives = 104/226 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
S L D K + E GH VN FHP L+ SG+ DR ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
W + + + V + G V V+F+ + S +D S+RV+
Sbjct: 215 FWDLEKFQV--VSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 206 (77.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 206 (77.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 62/230 (26%), Positives = 97/230 (42%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ CI LTGH V + E+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G D +K + GH + V F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P + S ADD VKLW + K + GH V+ V FH + ++ S S D++I
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 273 RVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
R WD+ K V E + +P+ L +G + V+ E ER
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 169 (64.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
++ S V+ L F W+ ++ ++LWD G ++ F H GPV V FH ++
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D I+ W+ + + + + G +R+V F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRTCISVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 168 (64.2 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 43/156 (27%), Positives = 72/156 (46%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R + R+ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + + GH + V+FH +EY + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQ 222
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + G V F+P + S D ++RV+
Sbjct: 223 VVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 247 (92.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GH V FHP E L+ S S D+T+R WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 64/226 (28%), Positives = 104/226 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
S L D K + E GH VN FHP L+ SG+ DR ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
W + + + V + G V V+F+ + S +D S+RV+
Sbjct: 215 FWDLEKFQV--VSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 206 (77.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 206 (77.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 62/230 (26%), Positives = 97/230 (42%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ CI LTGH V + E+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G D +K + GH + V F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P + S ADD VKLW + K + GH V+ V FH + ++ S S D++I
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 273 RVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
R WD+ K V E + +P+ L +G + V+ E ER
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 169 (64.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
++ S V+ L F W+ ++ ++LWD G ++ F H GPV V FH ++
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D I+ W+ + + + + G +R+V F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRTCISVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 168 (64.2 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 43/156 (27%), Positives = 72/156 (46%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R + R+ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + + GH + V+FH +EY + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQ 222
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + G V F+P + S D ++RV+
Sbjct: 223 VVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 247 (92.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GH V FHP E L+ S S D+T+R WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 64/226 (28%), Positives = 104/226 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
S L D K + E GH VN FHP L+ SG+ DR ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
W + + + V + G V V+F+ + S +D S+RV+
Sbjct: 215 FWDLEKFQV--VSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 206 (77.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 206 (77.6 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 62/230 (26%), Positives = 97/230 (42%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ CI LTGH V + E+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G D +K + GH + V F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P + S ADD VKLW + K + GH V+ V FH + ++ S S D++I
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 273 RVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
R WD+ K V E + +P+ L +G + V+ E ER
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 169 (64.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
++ S V+ L F W+ ++ ++LWD G ++ F H GPV V FH ++
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D I+ W+ + + + + G +R+V F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRTCISVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 168 (64.2 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 43/156 (27%), Positives = 72/156 (46%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R + R+ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + + GH + V+FH +EY + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQ 222
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + G V F+P + S D ++RV+
Sbjct: 223 VVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 247 (92.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GH V FHP E L+ S S D+T+R WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 64/226 (28%), Positives = 104/226 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
S L D K + E GH VN FHP L+ SG+ DR ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
W + + + V + G V V+F+ + S +D S+RV+
Sbjct: 215 FWDLEKFQV--VSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 206 (77.6 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 206 (77.6 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 62/230 (26%), Positives = 97/230 (42%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ CI LTGH V + E+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G D +K + GH + V F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P + S ADD VKLW + K + GH V+ V FH + ++ S S D++I
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 273 RVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
R WD+ K V E + +P+ L +G + V+ E ER
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 169 (64.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
++ S V+ L F W+ ++ ++LWD G ++ F H GPV V FH ++
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D I+ W+ + + + + G +R+V F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRTCISVL 131
C V+
Sbjct: 261 PERCFDVV 268
Score = 168 (64.2 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 43/156 (27%), Positives = 72/156 (46%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R + R+ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + + GH + V+FH +EY + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQ 222
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + G V F+P + S D ++RV+
Sbjct: 223 VVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 243 (90.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/227 (28%), Positives = 102/227 (44%)
Query: 24 ILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+LAS ++LW F H PVR V F + +D IKVW+
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L++L H ++R +F + IVS S+D+TI+IW+ ++ C++ + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 143 FHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDILRLSQMNTDL- 188
F+P + SA DQTV+VWD+ G + + P+D+ L + + L
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLK 253
Query: 189 -FGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
++ + Y L+GH V +F L SG D QV LWR N
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTN 300
Score = 232 (86.7 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 66/260 (25%), Positives = 115/260 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW+++ R+ H V V F L S D +++W H
Sbjct: 42 LMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + ++ +AS+D++I++W+ + + L H H+V CA F P L+VS
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD----LFGGVDAVVKY------- 198
S D+T+++WD K+ V+ D + + N G D VK
Sbjct: 162 CSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 219
Query: 199 VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+L+ H GVN +FHP+ +V+ + D +K+ + E + + TL+GH V V
Sbjct: 220 LLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
F ++ S D + +W
Sbjct: 278 FSKGGELFASGGADTQVLLW 297
Score = 194 (73.4 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 65/293 (22%), Positives = 125/293 (42%)
Query: 43 LIDR-FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+++R F H + + + + D + +WN+K H + +GH D + +VQF
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ SAS D+T+R+W R S H V F + +AS D++++V
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 162 WD------IGALRKKT-------VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV- 207
W + +L + T SP D L +S D K + V
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 208 --NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
N+ F+P+ I S D+ VK+W + K + + H V+C+ FH + +V+
Sbjct: 188 FANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL--LQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 266 NSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFK 317
S D ++++ D+ + + T + + ++ L A+G D+ +++++
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 178 (67.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + ++ + I++W YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F+ I SA DQT+++W+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL 179
+ + H+ V C SFHP ++ +V+AS D T+++ D+ G L +
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 180 RLS-QMNTDLF--GGVDAVV 196
+S +LF GG D V
Sbjct: 275 TVSFSKGGELFASGGADTQV 294
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 247 (92.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GH V FHP E L+ S S D+T+R WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 239 (89.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/226 (27%), Positives = 104/226 (46%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
S L D K + E GH VN FHP L+ SG+ DR ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
W + + + V + G V ++F+ + S +D S+RV+
Sbjct: 215 FWDLEKFQV--VSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVY 257
Score = 212 (79.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 66/273 (24%), Positives = 120/273 (43%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGALRKKTVSPADD-ILRLSQMNTDLF----GGVDAVVKY--------- 198
A+ D TV++WD+ A + + P + + + + + + G D +++
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 199 -VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
+EG V F+P + SG D ++++ + ++V + H V+ +
Sbjct: 225 SCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWEPERCFDVVLV--HWGKVADLAIC 281
Query: 258 AKQDIIVSNSEDK-SIRVWDVTKRTGVQTFRRE 289
Q I V+ S+ S V D+T+ T T R+
Sbjct: 282 NNQLIGVAFSQSNVSSYVVDLTRVTRTGTVARD 314
Score = 207 (77.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 62/230 (26%), Positives = 97/230 (42%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ CI LTGH V + E+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G D +K + GH + V F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P + S ADD VKLW + K + GH V+ V FH + ++ S S D++I
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Query: 273 RVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
R WD+ K V E + +P+ L +G + V+ E ER
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEPER 263
Score = 172 (65.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
++ S V+ L F W+ ++ ++LWD G ++ F H GPV V FH ++
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
L SG D I+ W+ + + + + G +R++ F+ + + S D ++R++ W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWE 260
Query: 124 SRTCISVLTGH 134
C V+ H
Sbjct: 261 PERCFDVVLVH 271
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/156 (27%), Positives = 72/156 (46%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R + R+ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + + GH + V+FH +EY + S S D+TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQ 222
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + G V F+P + S D ++RV+
Sbjct: 223 VVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVY 257
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 240 (89.5 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 57/162 (35%), Positives = 86/162 (53%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F S+ V L F+ K +++ + I++W G + H VR + F +Q
Sbjct: 379 FTGHSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFD-NQK 435
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +SGG D IKVWNY +C+ T GH D + +V F ++ IVS S D T+R+W+ S
Sbjct: 436 L-ISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVDS 492
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
RTC + L GH +V H + + SAS D T+R+WD+ +
Sbjct: 493 RTCYT-LRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNS 533
Score = 230 (86.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 82/289 (28%), Positives = 124/289 (42%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF-HKSQPLFVSGG 70
V+ L F +++ I L S I++W+Y G I + H+ V V F +KS VSG
Sbjct: 426 VRALVFDNQK-LISGGLDS-TIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS---IVSGS 480
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
D+ ++VW+ C +TL GH D++ V+ H I SASDD TIR+W+ S CI V
Sbjct: 481 ADHTVRVWHVDSRTC-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKV 539
Query: 131 L-----TGHNHYVMCA-SFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR---- 180
GH V C F KE+L+ S + + T + A
Sbjct: 540 FGGMENNGHIGQVQCIIPFTYKEELIEDESESDSENNQNSTTTTTTTSAAATATATAMGA 599
Query: 181 -LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP-TLPL-IVSGADDRQVKLWRMNETK 237
L N L + + + A P + P ++ A D +KLW + K
Sbjct: 600 TLGTNNISLPNDTATINRSTFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATGK 659
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+ T GH+ V + A I+S + D+ I+VWD+ + TF
Sbjct: 660 C--IRTQFGHIEGVWSIA--ADTFRIISGAHDRLIKVWDLQNGKCLHTF 704
Score = 222 (83.2 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 67/245 (27%), Positives = 107/245 (43%)
Query: 44 IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKI-KVWNYKMHRCLFTLLGHLDYIRTVQFH 102
+D D H V + +P + +K+ K W H + T GH D + +QF+
Sbjct: 334 LDTEDNHQKVVPTSVVVRKRPWKSVYSERFKLEKNWRKGTHT-IKTFTGHSDGVTCLQFN 392
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+Y +++ S D TI+IW S C+ LTGH V F ++ ++S LD T++VW
Sbjct: 393 RKY--LMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQK--LISGGLDSTIKVW 448
Query: 163 DI--GALRKKTVSPADDILRLSQMNTDLFGG----------VDAVVKYVLEGHDRGVNWA 210
+ G D ++ + N + G VD+ Y L GH VN
Sbjct: 449 NYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDWVNHV 508
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVD---TLRGHMNNVSCVM-FHAKQDIIVSN 266
H I S +DD +++W MN + +V GH+ V C++ F K+++I
Sbjct: 509 KIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQVQCIIPFTYKEELIEDE 568
Query: 267 SEDKS 271
SE S
Sbjct: 569 SESDS 573
Score = 56 (24.8 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 14/68 (20%), Positives = 34/68 (50%)
Query: 264 VSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERP 323
++++ D +I++WDV ++T + W +A+ +++ HD + V+ L+ +
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADT-FRIISGAHDRLIKVWDLQNGKC 700
Query: 324 AFAVSGDS 331
S +S
Sbjct: 701 LHTFSNNS 708
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 249 (92.7 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 81/274 (29%), Positives = 132/274 (48%)
Query: 37 DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH-RCLFTLLGHLDY 95
D + + I F E V + F +Q L +G D +V++ + +CL+T+ GH
Sbjct: 858 DLKCVSTIQSFRER---VNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKS 914
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRT--CISVLTGHNHYVMCASFHPKEDLVVSA 153
I ++ + Y I ++S D TI++ +S CI L GH V C + K + S
Sbjct: 915 IESIACNSNY--IFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEK--YLFSC 970
Query: 154 SLDQTVRVWDIGALRK-KTVSPADD--ILRLSQMNTDLF-GGVDAVVKYV---------- 199
S D+T++VWD+ ++ K+ I L+ LF GG D ++ YV
Sbjct: 971 SYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQII-YVWDTETLSMLF 1029
Query: 200 -LEGHDRGVNWA-AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS-CVMF 256
++GH+ +W + H T + S + D +K+W ++ +DTL+GH N+VS CV+
Sbjct: 1030 NMQGHE---DWVLSLHCTASYLFSTSKDNVIKIWDLSNFSC--IDTLKGHWNSVSSCVV- 1083
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
K + S SED SI+VWD+ V T + H
Sbjct: 1084 --KDRYLYSGSEDNSIKVWDLDTLECVYTIPKSH 1115
Score = 163 (62.4 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 67/283 (23%), Positives = 122/283 (43%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
RV ++F + + A G +++D + + H + + + S +F S
Sbjct: 871 RVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACN-SNYIFTSS 929
Query: 70 GDD-YKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
D+ K+ + +C+ TL+GH + V + +Y + S S D+TI++W+ + I
Sbjct: 930 PDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKY--LFSCSYDKTIKVWDLSTFKEI 987
Query: 129 SVLTG-HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADD-ILRLSQMN 185
G H Y+ + + + S DQ + VWD L + +D +L L
Sbjct: 988 KSFEGVHTKYIKTLALSGR--YLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTA 1045
Query: 186 TDLFG-GVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+ LF D V+K L+GH V+ + SG++D +K+W ++
Sbjct: 1046 SYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRY--LYSGSEDNSIKVWDLD 1103
Query: 235 ETKAWEVDTL-RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
+ V T+ + H V C+M Q I+S + D SI+VW+
Sbjct: 1104 TLEC--VYTIPKSHSLGVKCLMVFNNQ--IISAAFDGSIKVWE 1142
Score = 146 (56.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/164 (22%), Positives = 80/164 (48%)
Query: 2 LTKFE-TKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+ FE + +K L+ + ++ + + +I +WD +++ H+ V +H
Sbjct: 987 IKSFEGVHTKYIKTLALSGR--YLFSGGNDQIIYVWDTETLSMLFNMQGHEDWVLSLHCT 1044
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
S LF + D+ IK+W+ C+ TL GH + + + Y + S S+D +I++W
Sbjct: 1045 ASY-LFSTSKDNV-IKIWDLSNFSCIDTLKGHWNSVSSCVVKDRY--LYSGSEDNSIKVW 1100
Query: 121 NWQSRTCI-SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ + C+ ++ H+ V C + ++SA+ D +++VW+
Sbjct: 1101 DLDTLECVYTIPKSHSLGVKCLMVFNNQ--IISAAFDGSIKVWE 1142
Score = 139 (54.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDR-QVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
Y + GH + + A + + S D+ +V + R TK ++TL GH V+CV+
Sbjct: 906 YTVNGHRKSIESIACNSNY-IFTSSPDNTIKVHIIRSGNTKC--IETLVGHTGEVNCVV- 961
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVF 316
A + + S S DK+I+VWD++ +++F H ++ + L + G+D + V+
Sbjct: 962 -ANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVW 1020
Query: 317 KLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPI 356
E F + G + Y FST KD VI I
Sbjct: 1021 DTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDN-VIKI 1059
Score = 131 (51.2 bits), Expect = 0.00019, P = 0.00019
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
LS H ++ ++ VI++WD + ID H V K + L+ SG +D
Sbjct: 1039 LSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVV-KDRYLY-SGSEDNS 1096
Query: 75 IKVWNYKMHRCLFTL-LGHLDYIRTVQ-FHHEYPWIVSASDDQTIRIWNWQSR 125
IKVW+ C++T+ H ++ + F+++ I+SA+ D +I++W WQS+
Sbjct: 1097 IKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ---IISAAFDGSIKVWEWQSK 1146
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 221 (82.9 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ + P++ + ++ WD +I + H VR V H + L + G
Sbjct: 185 VRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGR 244
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + + TL+GH I VQ P +VS+S D T+R+W+ + + VL
Sbjct: 245 DSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVL 304
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTD-- 187
T H V + HPKE V SA D +R W + G+L S I+ +N D
Sbjct: 305 THHKRSVRATALHPKEFSVASACTDD-IRSWGLAEGSLLTNFESEKTGIINTLSINQDDV 363
Query: 188 LFGGVD 193
LF G D
Sbjct: 364 LFAGGD 369
Score = 197 (74.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
W + + +++WD G L H VR V P S +D +K W+ +
Sbjct: 154 WFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEK 213
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
++ + GHL +RTV H I +A D I++W+ ++R + L GH +
Sbjct: 214 NQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQ 273
Query: 143 FHPKEDLVVSASLDQTVRVWDIGA 166
P + VVS+S D TVR+WD+ A
Sbjct: 274 CTPVDPQVVSSSTDATVRLWDVVA 297
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 82/302 (27%), Positives = 132/302 (43%)
Query: 122 WQSRTCIS-VLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKT-----VSP 174
W + +S V+ GH +V C + P + + ++ S D T++VWD+ + KT V
Sbjct: 125 WHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMT 184
Query: 175 ADDILRLSQMNTDLFG-GVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGA 223
D+ +S + LF D VK + LE GH GV + HPTL LI +
Sbjct: 185 VRDVA-VSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAG 243
Query: 224 DDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT--KRT 281
D +KLW M T+ V TL GH ++ V +VS+S D ++R+WDV K
Sbjct: 244 RDSVIKLWDMR-TRI-PVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTM 301
Query: 282 GVQTFRREHDRFWILASHP-EMNLLAAGHDS--------GMIVFKLERERPAF----AVS 328
V T + R A HP E ++ +A D G ++ E E+ +++
Sbjct: 302 KVLTHHKRSVR--ATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSIN 359
Query: 329 GDSLFYA--KDRFLRYYEFSTQKDTQVIPIRRP-GSTSLNQSPRTLSYSPTENAVLICSD 385
D + +A + L +Y++ + Q + R GS +S ++ T LI +
Sbjct: 360 QDDVLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKT-GLRLITGE 418
Query: 386 VD 387
D
Sbjct: 419 AD 420
Score = 66 (28.3 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
LEG +R V + F T +++G D+ +K+W+ +ET E + N+S F
Sbjct: 396 LEG-ERSVLCSTFDKTGLRLITGEADKSIKIWKQDETATKESEPGLAWNPNLSAKRF 451
Score = 48 (22.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
V +L G +V C F +++ DKSI++W
Sbjct: 393 VGSLEGE-RSVLCSTFDKTGLRLITGEADKSIKIW 426
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 241 (89.9 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 66/227 (29%), Positives = 102/227 (44%)
Query: 24 ILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+LAS I+LW F H PVR V F S +D IKVWN
Sbjct: 74 LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYR 133
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L++L H ++R +F + IVS S+D+TI+IW+ ++ C++ + + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA 193
Query: 143 FHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADD-ILRLSQMNT-D 187
F+P + SA D TV++WDI G + + P+ + ++ S T
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLK 253
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+ ++ + Y L+GH V +F L SG D QV LWR N
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTN 300
Score = 237 (88.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 68/260 (26%), Positives = 114/260 (43%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW R R+ H + V F L S D I++W H
Sbjct: 42 LMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + ++ SAS+D++I++WN + + L H H+V CA F P L+VS
Sbjct: 102 TAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD----LFGGVDAVVKY------- 198
S D+T+++WD K+ V+ D + + N + G D VK
Sbjct: 162 CSEDKTIKIWD--TTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 199 VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+L+ H GVN +FHP+ +++ + D +K+ + E + + TL+GH V V
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
F ++ S D + +W
Sbjct: 278 FSKGGELFTSGGADAQVLLW 297
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 66/262 (25%), Positives = 111/262 (42%)
Query: 43 LIDR-FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+++R F H + V F + +G D + +W+ + F +GH D I +VQF
Sbjct: 9 VLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ SAS D+TIR+W R S H V F + SAS D++++V
Sbjct: 69 SPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKV 128
Query: 162 WD------IGALRKKT-------VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV- 207
W+ + +L + T SP D L +S D K + V
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 208 --NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
N+ AF+P I S D VK+W + K + + H V+CV FH + +++
Sbjct: 188 FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKL--LQHYQVHSGGVNCVSFHPSGNYLIT 245
Query: 266 NSEDKSIRVWDVTKRTGVQTFR 287
S D ++++ D+ + + T +
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQ 267
Score = 175 (66.7 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + ++ ++ I++W+ YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F+ I SA D T++IW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWD 214
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL 179
+ + H+ V C SFHP + +++AS D T+++ D+ G L +
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 180 RLS-QMNTDLF--GGVDAVV 196
+S +LF GG DA V
Sbjct: 275 TVSFSKGGELFTSGGADAQV 294
Score = 161 (61.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 60/255 (23%), Positives = 103/255 (40%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH I +V F + + S D + +W+ + + GH + F P +L+
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD-LF---GGVDAVVK-------- 197
SAS D+T+R+W K + A +R + D F D +K
Sbjct: 76 ASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQR 135
Query: 198 --YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
Y L H V A F P LIVS ++D+ +K+W + T V+ + + V
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVNNFSDFVGFANFVA 193
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMI 314
F+ I S D ++++WD+ +Q ++ ++ HP N L+ A D +
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLK 253
Query: 315 VFKLERERPAFAVSG 329
+ L R + + G
Sbjct: 254 ILDLLEGRLIYTLQG 268
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 243 (90.6 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 66/272 (24%), Positives = 121/272 (44%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
F K + + ++ +W+++ +F H G V V + S G D +I+
Sbjct: 55 FDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIR 114
Query: 77 VW-NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
+W N +C + H IR++ F + +++S+SDD+T+++W Q + + GH
Sbjct: 115 LWQNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHK 173
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTDLFGGVDA 194
++V P LV S S D+TV +WD+ + S DD +++SQ+N+
Sbjct: 174 NWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINS-------- 225
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
Y H V+ FHP ++S + D ++K+ + K + H V+ +
Sbjct: 226 ---Y--SDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKL--IQHYNAHDAQVNSI 278
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
H + S D I++WD+ R G Q +
Sbjct: 279 SIHPTGYFLASAGSDSKIKIWDL--RQGRQIY 308
Score = 177 (67.4 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 69/288 (23%), Positives = 123/288 (42%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F H+ + F S D + VWN+K + F +GH + V++ +
Sbjct: 43 FRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGE 102
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
I S D+ IR+W ++ S++ H + SF ++S+S D+T+++W +
Sbjct: 103 TIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQD 162
Query: 167 LRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHD-RGVN-WAAFHPTLPLIVSGAD 224
+K S A N G + ++ V G D + V W + S D
Sbjct: 163 -KKFMCSFA------GHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLD 215
Query: 225 DRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQ 284
D VK+ ++N + HM+ VS V+FH ++S+S D I++ D+ +Q
Sbjct: 216 DN-VKISQIN--------SYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQ 266
Query: 285 TFRREHDRFWILASHPEMNLLA-AGHDSGMIVFKLERERPAFAV-SGD 330
+ + ++ HP LA AG DS + ++ L + R + + S D
Sbjct: 267 HYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSND 314
Score = 169 (64.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/256 (19%), Positives = 107/256 (41%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
I+LW + + H G +R + F +S DD +K+W + + + + GH
Sbjct: 113 IRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGH 172
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+++R+ + + S SDD+T+ +W+ + +S + + V + + D + +
Sbjct: 173 KNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDT 232
Query: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAF 212
S Q + D L S D ++++ + ++ + Y HD VN +
Sbjct: 233 VS--QVLFHPDGTCLIS---SSFDHKIKITDIRSNKL-----IQHY--NAHDAQVNSISI 280
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
HPT + S D ++K+W + + + ++ TL + +++ V F+ D +
Sbjct: 281 HPTGYFLASAGSDSKIKIWDLRQGR--QIYTLYSNDKDITTVQFNQSGDYFATGGSQNLC 338
Query: 273 RVWDVTKRTGVQTFRR 288
VW +Q +
Sbjct: 339 MVWKTNFDQNIQNIEQ 354
Score = 142 (55.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
+ + + V + FH +++S I++ D R LI ++ HD V + H
Sbjct: 223 INSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHP 282
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+ S G D KIK+W+ + R ++TL + I TVQF+ + + +W
Sbjct: 283 TGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/168 (23%), Positives = 72/168 (42%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
++ +SF + ++L+S ++LW + + F H VR L SG D
Sbjct: 134 IRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSD 193
Query: 72 DYKIKVWNYKMHRCL--FTLLG-------------HLDYIRTVQFHHEYPWIVSASDDQT 116
D + +W+ + + ++ L H+D + V FH + ++S+S D
Sbjct: 194 DKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHK 253
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
I+I + +S I H+ V S HP + SA D +++WD+
Sbjct: 254 IKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDL 301
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 240 (89.5 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 67/238 (28%), Positives = 103/238 (43%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V L F + + ++ ++LW F H PVR V F L V+ +
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE 122
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IKVW+ R L++L H ++R +F + IVS S+D+TI+IW+ ++ C++
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA---LRKKTV-SPADDILRLSQMNTD 187
+ + F+P + SA D V++WDI L+ V S + L +
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS 242
Query: 188 LF-GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
L D VK Y L+GH V +F L+ SG D QV +WR N
Sbjct: 243 LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTN 300
Score = 227 (85.0 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 67/260 (25%), Positives = 114/260 (43%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW + R+ H V + F L S D +++W H
Sbjct: 42 LMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + +V+AS+D++I++W+ + + L H H+V CA F P L+VS
Sbjct: 102 TAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD----LFGGVDAVVKY------- 198
S D+T+++WD K+ V+ D + + N + G D VK
Sbjct: 162 CSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNK 219
Query: 199 VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+L+ H GVN +FHP +V+ + D VK+ + E + + TL+GH V V
Sbjct: 220 LLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRL--IYTLQGHTGPVFTVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
F +++ S D + +W
Sbjct: 278 FSKDGELLTSGGADAQVLIW 297
Score = 187 (70.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 65/293 (22%), Positives = 126/293 (43%)
Query: 43 LIDR-FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+++R F H + F + + D + +W+ K H + +GH D + ++QF
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ + SAS D+T+R+W + S H V F L+V+AS D++++V
Sbjct: 69 SPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 162 WD------IGALRKKT-------VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV- 207
W + +L + T SP D L +S D K + V
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 208 --NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
N+ F+P I S D VK+W + K + + H V+C+ FH + +V+
Sbjct: 188 FANFVDFNPNGTCIASAGSDHAVKIWDIRMNKL--LQHYQVHSCGVNCLSFHPLGNSLVT 245
Query: 266 NSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFK 317
S D ++++ D+ + + T + + ++ + LL +G D+ +++++
Sbjct: 246 ASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Score = 157 (60.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + ++ + I++W +R L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F+ I SA D ++IW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWD 214
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
+ + H+ V C SFHP + +V+AS D TV++ D+
Sbjct: 215 IRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDL 257
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 38/158 (24%), Positives = 68/158 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
I++ I++WD ++ F + G V F+ + S G D+ +K+W+ +M+
Sbjct: 159 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMN 218
Query: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
+ L H + + FH +V+AS D T+++ + I L GH V SF
Sbjct: 219 KLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSF 278
Query: 144 HPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+L+ S D V +W + P ++ RL
Sbjct: 279 SKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRL 316
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 237 (88.5 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 64/227 (28%), Positives = 102/227 (44%)
Query: 24 ILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+LAS ++LW F H PVR V F + +D IKVW+
Sbjct: 32 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 91
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L++L H ++R +F + IVS S+D+TI+IW+ ++ C++ + +
Sbjct: 92 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 151
Query: 143 FHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADD-ILRLSQMNT-D 187
F+P + SA DQTV+VWD+ G + + P+ + ++ S T
Sbjct: 152 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 211
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+ ++ + Y L+GH V +F L SG D QV LWR N
Sbjct: 212 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTN 258
Score = 229 (85.7 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 65/258 (25%), Positives = 114/258 (44%)
Query: 35 LWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD 94
LW+++ R+ H V V F L S D +++W H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 95 YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSAS 154
+R+V F + ++ +AS+D++I++W+ + + L H H+V CA F P L+VS S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 155 LDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD----LFGGVDAVVKY-------VL 200
D+T+++WD K+ V+ D + + N G D VK +L
Sbjct: 122 EDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 179
Query: 201 EG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
+ H GVN +FHP+ +++ + D +K+ + E + + TL+GH V V F
Sbjct: 180 QHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVSFS 237
Query: 258 AKQDIIVSNSEDKSIRVW 275
++ S D + +W
Sbjct: 238 KGGELFASGGADTQVLLW 255
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 50/200 (25%), Positives = 89/200 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + ++ + I++W YR L + H VR F
Sbjct: 54 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 112
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F+ I SA DQT+++W+
Sbjct: 113 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 172
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL 179
+ + H+ V C SFHP + +++AS D T+++ D+ G L +
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 232
Query: 180 RLS-QMNTDLF--GGVDAVV 196
+S +LF GG D V
Sbjct: 233 TVSFSKGGELFASGGADTQV 252
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/227 (25%), Positives = 96/227 (42%)
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW--D----IGALRKKT- 171
+WN++ GH V F P +L+ SAS D+TVR+W D + T
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 172 -VSPAD---DILRLSQMNTDLFGGVDAVVK----YVLEGHDRGVNWAAFHPTLPLIVSGA 223
V D D L+ + D V ++ + Y L H V A F P LIVS +
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 224 DDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGV 283
+D+ +K+W + T V+ + + V F+ I S D++++VWDV +
Sbjct: 122 EDKTIKIW--DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 179
Query: 284 QTFRREHDRFWILASHPEMN-LLAAGHDSGMIVFKLERERPAFAVSG 329
Q ++ ++ HP N L+ A D + + L R + + G
Sbjct: 180 QHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 226
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 244 (91.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 55/190 (28%), Positives = 88/190 (46%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V ++F+S+ +LA SGVI+LWD ++ F H V FH SG
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++VW+ + C+ T GH I T++F + W+VS D +++W+ + +
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD--- 187
H + FHP E L+ + S D+TV+ WD+ T P +R + D
Sbjct: 181 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT 240
Query: 188 LFGGVDAVVK 197
LF G+D +K
Sbjct: 241 LFCGLDDGLK 250
Score = 228 (85.3 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 71/267 (26%), Positives = 116/267 (43%)
Query: 39 RMGTLIDRFDEHDGPVRGVHF-HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIR 97
+ G + F H G V + K+ L ++GGDDYK+ +W+ +L GH +
Sbjct: 3 KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62
Query: 98 TVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQ 157
+V F+ E +++ + I++W+ + + TGH FHP + + S S D
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122
Query: 158 TVRVWDIGALRKK----TVSPADDILRLSQMNTD----LFGGVDAVVK----------YV 199
+RVWD RKK T + + + D + GG+D VVK +
Sbjct: 123 NLRVWDT---RKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHA 258
+ H+ + FHP L+ +G+ DR VK W + ET +E + T R V + FH
Sbjct: 180 FKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL-ET--FELIGTTRPEATGVRAIAFHP 236
Query: 259 KQDIIVSNSEDK-SIRVWD-VTKRTGV 283
+ +D + W+ V R GV
Sbjct: 237 DGQTLFCGLDDGLKVYSWEPVICRDGV 263
Score = 157 (60.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/222 (26%), Positives = 103/222 (46%)
Query: 202 GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQD 261
GH V+ AF+ L+++GA +KLW + E+K V GH +N S V FH +
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKM--VRAFTGHRSNCSAVEFHPFGE 113
Query: 262 IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMIVFKLE- 319
+ S S D ++RVWD K+ +QT++ + P+ +++ G D+ + V+ L
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 173
Query: 320 ---------RERPAFAVSGDSLFY-----AKDRFLRYYEFSTQKDTQVIPIRRPGSTSLN 365
E P ++ L + + DR +++++ T ++I RP +T +
Sbjct: 174 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLET---FELIGTTRPEATGV- 229
Query: 366 QSPRTLSYSPTENAVLICSDVDG---GSYELYVIPKDSIGRG 404
R +++ P + L C DG S+E VI +D + G
Sbjct: 230 ---RAIAFHP-DGQTLFCGLDDGLKVYSWEP-VICRDGVDMG 266
Score = 133 (51.9 bits), Expect = 0.00010, P = 0.00010
Identities = 36/162 (22%), Positives = 67/162 (41%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
M+ F + + FH ++ + +++WD R I + H + + F
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 151
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
VSGG D +KVW+ + L H IR++ FH + + S D+T++ W
Sbjct: 152 PDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ ++ I V +FHP + + LD ++V+
Sbjct: 212 DLETFELIGTTRPEATGVRAIAFHP-DGQTLFCGLDDGLKVY 252
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 237 (88.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 64/227 (28%), Positives = 102/227 (44%)
Query: 24 ILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+LAS ++LW F H PVR V F + +D IKVW+
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L++L H ++R +F + IVS S+D+TI+IW+ ++ C++ + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 143 FHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADD-ILRLSQMNT-D 187
F+P + SA DQTV+VWD+ G + + P+ + ++ S T
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 253
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+ ++ + Y L+GH V +F L SG D QV LWR N
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTN 300
Score = 231 (86.4 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 65/260 (25%), Positives = 115/260 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW+++ R+ H V V F L S D +++W H
Sbjct: 42 LMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + ++ +AS+D++I++W+ + + L H H+V CA F P L+VS
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD----LFGGVDAVVKY------- 198
S D+T+++WD K+ V+ D + + N G D VK
Sbjct: 162 CSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 219
Query: 199 VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+L+ H GVN +FHP+ +++ + D +K+ + E + + TL+GH V V
Sbjct: 220 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
F ++ S D + +W
Sbjct: 278 FSKGGELFASGGADTQVLLW 297
Score = 191 (72.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/293 (21%), Positives = 125/293 (42%)
Query: 43 LIDR-FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+++R F H + + + + D + +WN+K H + +GH D + +VQF
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ SAS D+T+R+W R S H V F + +AS D++++V
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 162 WD------IGALRKKT-------VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV- 207
W + +L + T SP D L +S D K + V
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 208 --NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
N+ F+P+ I S D+ VK+W + K + + H V+C+ FH + +++
Sbjct: 188 FANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL--LQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 266 NSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFK 317
S D ++++ D+ + + T + + ++ L A+G D+ +++++
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/200 (25%), Positives = 89/200 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + ++ + I++W YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F+ I SA DQT+++W+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL 179
+ + H+ V C SFHP + +++AS D T+++ D+ G L +
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 180 RLS-QMNTDLF--GGVDAVV 196
+S +LF GG D V
Sbjct: 275 TVSFSKGGELFASGGADTQV 294
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 240 (89.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 74/275 (26%), Positives = 126/275 (45%)
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D K NYKM R + + + +Q+ + IVS D TI+IW+ + +C +L
Sbjct: 202 DNNWKRGNYKMTR-INCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRIL 258
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNT--- 186
+GH V+C + + +++S S D TVRVWD+ G K + + +L L N
Sbjct: 259 SGHTGSVLCLQYDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMV 316
Query: 187 -----------DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
D+ D ++ VL GH VN F IVS + DR +K+W M+
Sbjct: 317 TCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRY--IVSASGDRTIKVWSMDT 374
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI 295
+ V TL GH ++C+ + + ++VS S D +IR+WD+ ++ H+
Sbjct: 375 LEF--VRTLAGHRRGIACLQYRGR--LVVSGSSDNTIRLWDIHSGVCLRVLEG-HEELVR 429
Query: 296 LASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGD 330
E +++ +D + V+ L+ A+S +
Sbjct: 430 CIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSE 464
Score = 199 (75.1 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 79/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
+T+ +S KG L + + I++ L I++WD + + H G V +
Sbjct: 212 MTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQ 269
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + +SG D ++VW+ + C+ TL+ H + + ++F + +V+ S D++I
Sbjct: 270 YDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI--MVTCSKDRSIA 325
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S I+ VL GH V F + +VSAS D+T++VW + L +T++
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAG 383
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSG 441
Query: 223 ADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV-----MFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + A + L + S V +F + D IVS+S D +I +W
Sbjct: 442 AYDGKIKVWDLQA--ALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
Query: 276 D 276
D
Sbjct: 500 D 500
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 240 (89.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 74/275 (26%), Positives = 126/275 (45%)
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D K NYKM R + + + +Q+ + IVS D TI+IW+ + +C +L
Sbjct: 202 DNNWKRGNYKMTR-INCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRIL 258
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNT--- 186
+GH V+C + + +++S S D TVRVWD+ G K + + +L L N
Sbjct: 259 SGHTGSVLCLQYDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMV 316
Query: 187 -----------DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
D+ D ++ VL GH VN F IVS + DR +K+W M+
Sbjct: 317 TCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRY--IVSASGDRTIKVWSMDT 374
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI 295
+ V TL GH ++C+ + + ++VS S D +IR+WD+ ++ H+
Sbjct: 375 LEF--VRTLAGHRRGIACLQYRGR--LVVSGSSDNTIRLWDIHSGVCLRVLEG-HEELVR 429
Query: 296 LASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGD 330
E +++ +D + V+ L+ A+S +
Sbjct: 430 CIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSE 464
Score = 199 (75.1 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 79/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
+T+ +S KG L + + I++ L I++WD + + H G V +
Sbjct: 212 MTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQ 269
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + +SG D ++VW+ + C+ TL+ H + + ++F + +V+ S D++I
Sbjct: 270 YDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI--MVTCSKDRSIA 325
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S I+ VL GH V F + +VSAS D+T++VW + L +T++
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAG 383
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSG 441
Query: 223 ADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV-----MFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + A + L + S V +F + D IVS+S D +I +W
Sbjct: 442 AYDGKIKVWDLQA--ALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
Query: 276 D 276
D
Sbjct: 500 D 500
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 236 (88.1 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 65/227 (28%), Positives = 101/227 (44%)
Query: 24 ILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+LAS ++LW F H PVR V F + +D IKVWN
Sbjct: 74 LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 133
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
R L++L H ++R +F + IVS S+D+TI+IW+ ++ C++ + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 143 FHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADD-ILRLSQMNT-D 187
F+P + SA D TV++WDI G + + P+ + I+ S T
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLK 253
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+ ++ + Y L+GH V +F L SG D QV LWR N
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTN 300
Score = 229 (85.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 67/260 (25%), Positives = 115/260 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW+ + R+ H V V F L S D +++W H
Sbjct: 42 LMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + ++ +AS+D++I++WN + + L H H+V CA F P L+VS
Sbjct: 102 TAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD----LFGGVDAVVKY------- 198
S D+T+++WD K+ V+ D + + N + G D VK
Sbjct: 162 CSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 199 VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+L+ H GVN +FHP+ I++ + D +K+ + E + + TL+GH V V
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRL--IYTLQGHTGPVFTVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
F ++ S D + +W
Sbjct: 278 FSKGGELFSSGGADTQVLLW 297
Score = 190 (71.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 65/262 (24%), Positives = 109/262 (41%)
Query: 43 LIDR-FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+++R F H + V F S + D + +WN K F +GH D + +VQF
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ SAS D+T+R+W R S H V F + +AS D++++V
Sbjct: 69 SPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 162 WD------IGALRKKT-------VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV- 207
W+ + +L + T SP D L +S D K + V
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 208 --NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
N+ F+P I S D VK+W + K + + H V+CV FH + I++
Sbjct: 188 FANFVDFNPNGTCIASAGSDHTVKIWDIRVNKL--LQHYQVHSGGVNCVSFHPSGNYIIT 245
Query: 266 NSEDKSIRVWDVTKRTGVQTFR 287
S D ++++ D+ + + T +
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQ 267
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/200 (25%), Positives = 89/200 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + ++ + I++W+ YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F+ I SA D T++IW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWD 214
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL 179
+ + H+ V C SFHP + +++AS D T+++ D+ G L +
Sbjct: 215 IRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVF 274
Query: 180 RLS-QMNTDLF--GGVDAVV 196
+S +LF GG D V
Sbjct: 275 TVSFSKGGELFSSGGADTQV 294
Score = 169 (64.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 71/282 (25%), Positives = 116/282 (41%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH I +V F + +AS D + +WN + + GH V F P +L+
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDI-LRLSQMNTD-LF---GGVDAVVK-------- 197
SAS D+TVR+W K + A +R + D F D +K
Sbjct: 76 ASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQR 135
Query: 198 --YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
Y L H V A F P LIVS ++D+ +K+W + T V+ + + V
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW--DTTNKQCVNNFSDSVGFANFVD 193
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMI 314
F+ I S D ++++WD+ +Q ++ ++ HP N ++ A D +
Sbjct: 194 FNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLK 253
Query: 315 VFKLERERPAFAVSGDSLFYAKDRFLRYYE-FSTQ-KDTQVI 354
+ L R + + G + F + E FS+ DTQV+
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 215 (80.7 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 42/145 (28%), Positives = 70/145 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLD 156
GH V FHP E L+ S S D
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 206 (77.6 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 197 (74.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADD 225
S L D K + E GH VN FHP L+ SG+ D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 163 (62.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 48/177 (27%), Positives = 74/177 (41%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ CI LTGH V + E+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G D +K + GH + V F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
P + S ADD VKLW + K + GH V+ V FH + ++ S S D
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKM--MSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G DD +V LW +N+ + +L GH + V V + +++IV+ S+ SIRVWD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAG-HDSGMIVFKLERERPAFAVSGDS 331
++T L HP +A+G D+ + ++ + R+ F G S
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 147
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 173 SPADDILRLSQMNTDLFGGVDAV-VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
+P + I+ SQ + ++A + L GH + FHP + SG+ D +KLW
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 232 RMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
+ V RGH V C+ F + S ++D ++++WD+T + F
Sbjct: 133 DIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 190
Query: 292 RFWILASHPEMNLLAAG 308
++ HP LLA+G
Sbjct: 191 PVNVVEFHPNEYLLASG 207
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L GH V + LIV+G+ +++W + K + TL GH N+ + FH
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPY 116
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHD 310
+ + S S+D +I++WD+ ++ V +R L P+ LA+ D
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 231 (86.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 65/228 (28%), Positives = 102/228 (44%)
Query: 43 LIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH 102
LI + H + V F + D +K+WN C TL GH + +
Sbjct: 71 LISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS 130
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ IV+ASDD+T++I+ + L GH +YV C +F+P+ LVVS S D++VR+W
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 163 DIGA-LRKKTVSPADDILRLSQMNTD--LF--GGVDAVV-----------KYVLEGHDRG 206
D+ + KT+ D + N D L G D +V K +++ +
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V + F P I+S D +KLW + K + +GH NN C+
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKT--LKQYQGHENNKYCI 296
Score = 194 (73.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 44/160 (27%), Positives = 79/160 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V +SF+ I + + G++++WD G + D+ + PV V F + +
Sbjct: 205 SDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYIL 264
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
S D +K+W++ + L GH + Y F WI+S S+D I +WN Q+
Sbjct: 265 SSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQT 324
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ + L GH V+ + HP ++++ S +L D T+R+W
Sbjct: 325 KEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 164 (62.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 56/233 (24%), Positives = 111/233 (47%)
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
++ + T+ GH I V+F ++ ++S D+T++IWN +C LTGH V +
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVDAVVK 197
+ +V+AS D+T++++++ ++ KT+ + + N + G D V+
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 198 Y----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
L H V+ +F+ LI SG+ D V++W + V TL
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQC--VKTLVDD 246
Query: 248 MNN-VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR-REHDRFWILAS 298
N V+ V F I+S++ D ++++WD K ++ ++ E++++ I A+
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFAN 299
Score = 163 (62.4 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 37/163 (22%), Positives = 72/163 (44%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+++ E + + + F ++ S +++W+ + H V +
Sbjct: 71 LISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS 130
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
V+ DD +K++ + TL GH +Y+ F+ + +VS S D+++RIW
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ ++ C+ L H+ V SF+ L+ S S D VR+WD
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 193 DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
D + L GH GVN A+ IV+ +DD+ +K++ + K TL+GH N V
Sbjct: 110 DLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKM--AKTLKGHTNYVF 167
Query: 253 CVMFHAKQDIIVSNSEDKSIRVWDVTKRTG--VQTFRREHDRFWILASHPEMNLLAAGHD 310
C F+ + ++VS S D+S+R+WDV RTG V+T D ++ + + +L+ +G
Sbjct: 168 CCNFNPQSSLVVSGSFDESVRIWDV--RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSY 225
Query: 311 SGMI 314
G++
Sbjct: 226 DGLV 229
Score = 159 (61.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 38/160 (23%), Positives = 78/160 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V +F+ + +++ +++WD R G + H PV V F++ L S
Sbjct: 163 TNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITS 222
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
G D +++W+ +C+ TL+ + + V+F +I+S++ D T+++W++
Sbjct: 223 GSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKT 282
Query: 128 ISVLTGH--NHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
+ GH N Y + A+F ++S S D + VW++
Sbjct: 283 LKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNL 322
Score = 114 (45.2 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
VK +++ + V + F P I+S D +KLW + K + +GH NN C+
Sbjct: 240 VKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKT--LKQYQGHENNKYCIF 297
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS--HPEMNLLAAG 308
+ I+S SED I VW++ + VQ+ H + ++AS HP N++A+G
Sbjct: 298 ANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEG-HTQA-VIASDCHPMQNMIASG 353
Score = 85 (35.0 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS--EDKSIRVW 275
I+SG++D ++ +W + +TK V +L GH V H Q++I S + D +IR+W
Sbjct: 308 IISGSEDCKIYVWNL-QTKE-VVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 64 (27.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
LEGH + V + HP +I SGA D +++WR
Sbjct: 331 LEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWR 365
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 236 (88.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 91/340 (26%), Positives = 152/340 (44%)
Query: 5 FETKSNRVKGLSF-HSKRPWILASLHSGVIQLWDYRMGTL-IDRFDEHDGPVRGVH-FHK 61
F+ ++N V S+ HS P I+ + + I+ ++R G + R +GV+
Sbjct: 177 FKNRTNEVPPNSYYHSLYPKIIQDIET--IEA-NWRCGRHNLQRIQCRSENSKGVYCLQY 233
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+SG D IK+W+ + CL L GH + +Q+ IV+ S D T+R+W+
Sbjct: 234 DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWD 291
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--P 174
S ++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V
Sbjct: 292 VSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 175 ADDILRLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGAD 224
A +++ G D +K +V L GH RG+ + L +VSG+
Sbjct: 350 AVNVVDFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSS 406
Query: 225 DRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----R 280
D ++LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R
Sbjct: 407 DNTIRLWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPR 462
Query: 281 TGVQTF--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
T R EH E ++++ HD ++++
Sbjct: 463 APASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
Score = 152 (58.6 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 73/299 (24%), Positives = 125/299 (41%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + + I++ L I++WD + + H G V +
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQ 272
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTI- 117
+ + + V+G D ++VW+ L TL+ H + + ++F + S +
Sbjct: 273 Y--DERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVW 330
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSPAD 176
+ + + VL GH V F K +VSAS D+T++VW +T++
Sbjct: 331 DMASATDISLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 177 DILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGAD 224
+ Q L G D ++ VLEGH+ V F IVSGA
Sbjct: 389 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAY 446
Query: 225 DRQVKLWRMN---ETKAWE----VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
D ++K+W + + +A + TL H V + F Q I+S+S D +I +WD
Sbjct: 447 DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ--IISSSHDDTILIWD 503
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 242 (90.2 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 66/242 (27%), Positives = 103/242 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + KS F +G D IKVW+ TL GH+ IR ++ +P++
Sbjct: 206 HTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLF 265
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D + W+ +S + GH V + HP D++ S D VRVWD+
Sbjct: 266 SVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRAN 325
Query: 170 --KTVSPADDILRLSQMNTD---LFGGVDAVVKY----------VLEGHDRGVNWAAFHP 214
+ IL L N D + G +D VK L H +GV H
Sbjct: 326 IFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHE 385
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
+GA D +K W+ + + L GH + ++ + +A +++VS ++ SI
Sbjct: 386 KEYSFATGAADN-IKQWKCPDGSF--IKNLSGHNSIINAMALNA-DNVLVSGGDNGSISF 441
Query: 275 WD 276
WD
Sbjct: 442 WD 443
Score = 190 (71.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 50/234 (21%), Positives = 97/234 (41%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W I++WD G L H +RG+ P S G+
Sbjct: 210 VRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGE 269
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D K+ W+ + ++ + GH + +V H + S D +R+W+ ++R I +
Sbjct: 270 DNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEM 329
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-LRKKTVSPADDILRLSQMNTDLF- 189
GH ++ + V+S S+D TV++WD+ T++ +R ++ +
Sbjct: 330 KGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYS 389
Query: 190 ---GGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N A + ++VSG D+ + W
Sbjct: 390 FATGAADNIKQWKCPDGSFIKNLSGHNSIINAMALNAD-NVLVSGGDNGSISFW 442
Score = 167 (63.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 51/194 (26%), Positives = 85/194 (43%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI--LRLSQMN 185
V++GH +V + + + S D T++VWD+ G L+ I L +S +
Sbjct: 202 VISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRH 261
Query: 186 TDLFG-GVD-AVVKYVLE---------GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
LF G D V+ + LE GH +GV A HPTL ++ SG D V++W M
Sbjct: 262 PYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMR 321
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
T+A + ++GH + + ++S S D ++++WD+ T T
Sbjct: 322 -TRA-NIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVR 379
Query: 295 ILASHPEMNLLAAG 308
+ H + A G
Sbjct: 380 SMVIHEKEYSFATG 393
Score = 151 (58.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 54/241 (22%), Positives = 97/241 (40%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH ++R + W + S D TI++W+ S LTGH + + +
Sbjct: 205 GHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYL 264
Query: 151 VSASLDQTVRVWDIGALR--KKTVSPADDILRLSQMNT-D-LF-GGVDAVVK-------- 197
S D V WD+ + + + + ++ T D LF GG D V+
Sbjct: 265 FSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRA 324
Query: 198 --YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+ ++GH + P ++SG+ D VKLW + TL H V ++
Sbjct: 325 NIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDL--ATGTSAATLTNHKKGVRSMV 382
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIV 315
H K+ + + D +I+ W + ++ + +A + + N+L +G D+G I
Sbjct: 383 IHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHNSIINAMALNAD-NVLVSGGDNGSIS 440
Query: 316 F 316
F
Sbjct: 441 F 441
Score = 38 (18.4 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 686 QGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLK 723
+G AGI + A+ +T + RL IT DK K K
Sbjct: 463 EGEAGIFDMAFDKTGS--RL-----ITCEADKTIKFYK 493
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 232 (86.7 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 261
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 262 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 321
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 322 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 374
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 375 TIRLWDI 381
Score = 221 (82.9 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 205 ISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 262
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 263 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 320
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 321 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 377
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 378 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 433
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 434 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 468
Score = 190 (71.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 80/301 (26%), Positives = 135/301 (44%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + + I++ L I++WD + H G V +
Sbjct: 181 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQ 238
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 239 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 294
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 295 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 352
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 353 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 410
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 411 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 468
Query: 276 D 276
D
Sbjct: 469 D 469
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 235 (87.8 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G+SF R ++L+S G I+LW + T + + H+ PV F FVS
Sbjct: 499 SGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVS 558
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH ++ + S D+T+R+W+ + C+
Sbjct: 559 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCV 618
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + S S D V +WDIG
Sbjct: 619 RIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Score = 194 (73.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 61/224 (27%), Positives = 97/224 (43%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L GH + V F + +++S+S+D TIR+W+ Q+ TC+
Sbjct: 477 DDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVG 536
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPADDILRLSQMNTD 187
GHN+ V F P VS D+ R+W LR AD N++
Sbjct: 537 YKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 188 LF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ AF P + SG+ D +V LW +
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGH 656
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
+ L+GH + + F +II S S D ++R+WDV +
Sbjct: 657 --GLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMR 698
Score = 186 (70.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV GV F + +S +D I++W+ + CL GH + QF + V
Sbjct: 498 HSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFV 557
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + V + S D+TVR+WD+
Sbjct: 558 SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNC 617
Query: 165 --------GALRKKTVSPADDILRLSQMNTD----LFGGVDAVVKYVLEGHDRGVNWAAF 212
G + SP L + +TD L+ ++ L+GH + F
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFL--ASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKF 675
Query: 213 HPTLPLIVSGADDRQVKLW 231
+I SG+ D V+LW
Sbjct: 676 SRDGEIIASGSIDNTVRLW 694
Score = 162 (62.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 55/236 (23%), Positives = 96/236 (40%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN-HYVMCASF 143
C +T L + V F + I D T+R+W+ + V + + + + S
Sbjct: 418 CFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESD 477
Query: 144 HPKEDLV-VSASLDQTVRVWDIGALRKKTVSPADD-ILRLSQMNTDLFGGVDAVVKYV-L 200
E ++ S + + G + + SP + +L S+ T + V
Sbjct: 478 DVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGY 537
Query: 201 EGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
+GH+ V W F P VSG DR +LW + + + GH+ +V+C FH
Sbjct: 538 KGHNYPV-WDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVTCTRFHPN 594
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIV 315
+ + + S D+++R+WDV V+ F LA P LA+G G ++
Sbjct: 595 SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Score = 154 (59.3 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 36/138 (26%), Positives = 60/138 (43%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 561 HDRVARLWATDHYQPLRI--FAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCV 618
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ S S D + +W+ I+ L GH + F
Sbjct: 619 RIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRD 678
Query: 147 EDLVVSASLDQTVRVWDI 164
+++ S S+D TVR+WD+
Sbjct: 679 GEIIASGSIDNTVRLWDV 696
Score = 144 (55.7 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 61/268 (22%), Positives = 103/268 (38%)
Query: 57 VHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQT 116
V F L G D ++VW+ + +R V+ + I SDD
Sbjct: 432 VDFTDDSSLIAGGFADSTVRVWSVTPKK-----------LRKVKSAADLNLIDKESDDVL 480
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-----KKT 171
RI + ++ + +L GH+ V SF P + ++S+S D T+R+W + K
Sbjct: 481 ERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGH 540
Query: 172 VSPADDILRLSQMNTDLF-GGVDAVVK------Y----VLEGHDRGVNWAAFHPTLPLIV 220
P D + S GG D V + Y + GH V FHP +
Sbjct: 541 NYPVWDT-QFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVA 599
Query: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR 280
+G+ DR V+LW + + T GH + + F + S S D + +WD+
Sbjct: 600 TGSSDRTVRLWDVLNGNCVRIFT--GHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHG 657
Query: 281 TGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + L + ++A+G
Sbjct: 658 LMIAELKGHTGTIYALKFSRDGEIIASG 685
Score = 134 (52.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ ++LWD G + F H GP+ + F + SG D ++
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH I ++F + I S S D T+R+W+
Sbjct: 651 LWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 234 (87.4 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 66/243 (27%), Positives = 107/243 (44%)
Query: 50 HDGPVRGVHFHKSQP-LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H V + KS L +GGDD ++ VW+ C+ +L GH I ++Q + I
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---G 165
V+ S +IR+W+ ++ + L GH + FHP V S SLD +++WD+ G
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 166 ALRK-KTVSPADDILRLSQMNTDLFGGVD-----------AVVKYVLEGHDRGVNWAAFH 213
+ K K+ + A LR S L D V + GH VN FH
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH 198
Query: 214 PTLP-LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P++ L+ SG+ ++ W + K V + V C++F+ + +D S+
Sbjct: 199 PSIEYLLASGSSSMTIRFWDLE--KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SL 255
Query: 273 RVW 275
RV+
Sbjct: 256 RVY 258
Score = 226 (84.6 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
++ L +K I+A SG I++WD ++ H + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F H +R ++F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 132 TGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
TGH V FHP E L+ S S T+R WD+
Sbjct: 186 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Score = 194 (73.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 63/233 (27%), Positives = 97/233 (41%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA- 166
+ + DD + +W+ C+ LTGH + KE+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 95
Query: 167 --LR-----KKTVSPAD-----DILRLSQMNTDL-FGGV---DAVVKYVLEGHDRGVNWA 210
LR K + D + ++TD+ V + KY + H + V
Sbjct: 96 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCL 153
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQD-IIVSNSED 269
F P + S ADD VKLW + K T GH V+ V FH + ++ S S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT--GHYGPVNVVEFHPSIEYLLASGSSS 211
Query: 270 KSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
+IR WD+ K V E + +P+ L G + V+ E ER
Sbjct: 212 MTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPER 264
Score = 187 (70.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ +W + H P+ + + L V+G I+VW+ + + L TLLGH
Sbjct: 45 VNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + CI H V C F P + S
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 141 (54.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/129 (23%), Positives = 59/129 (45%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS- 62
K+++ + V+ L F W+ ++ ++LWD G ++ F H GPV V FH S
Sbjct: 142 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSI 201
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
+ L SG I+ W+ + + + +R + F+ + + D ++R++ W
Sbjct: 202 EYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGW 260
Query: 123 QSRTCISVL 131
+ C V+
Sbjct: 261 EPERCFDVV 269
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 30/105 (28%), Positives = 56/105 (53%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G DD +V +W +N+ V +L GH + + AK+++IV+ S+ SIRVWD+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNC--VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLERE 321
++T L HP + +A+G D+ + ++ + R+
Sbjct: 93 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 232 (86.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 295
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 296 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 355
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 356 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 408
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 409 TIRLWDI 415
Score = 221 (82.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 239 ISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 296
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 297 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 354
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 355 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 411
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 412 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 467
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 468 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
Score = 190 (71.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 80/301 (26%), Positives = 135/301 (44%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + + I++ L I++WD + H G V +
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQ 272
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 273 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 328
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 329 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 386
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 444
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 445 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 502
Query: 276 D 276
D
Sbjct: 503 D 503
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 229 (85.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 67/255 (26%), Positives = 120/255 (47%)
Query: 37 DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYI 96
D R L H P+ V F+KS F++G D K+W+ L TL GH + +
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV 137
Query: 97 RTVQFHHEY-PWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+ F++ Y + + S D+T ++W+ ++ C GH ++C +F+P+ LV + S+
Sbjct: 138 YAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSM 197
Query: 156 DQTVRVWDIGALRKKTVSPAD--DILRLSQMNTD---LFGGVD--AVV-------K-YVL 200
D T ++WD+ + + + +I+ L T + G D A++ K +VL
Sbjct: 198 DTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH ++ F+ LI + + D+ K+W + + TL GH + V V F+
Sbjct: 258 SGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQC--LATLLGHNDEVLDVCFNYTG 315
Query: 261 DIIVSNSEDKSIRVW 275
+I + S D + RV+
Sbjct: 316 QLIATASADGTSRVF 330
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 72/310 (23%), Positives = 131/310 (42%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD-DY 73
++F+ + + ++WD G + + H V + F+ V+ G D
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDK 157
Query: 74 KIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTG 133
K+W+ + +C +T GH I + F+ + + + S D T ++W+ +S +S L G
Sbjct: 158 TCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG 217
Query: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV-SPADDILRLSQMNTDLF--- 189
H ++ F+ D +V+ S D T +WD+ + RK V S + Q N D
Sbjct: 218 HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIA 277
Query: 190 -GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
+D K L GH+ V F+ T LI + + D +++ + +
Sbjct: 278 TASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC 337
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS 298
+ L GH +S V F+A+ +++ S DK+ RVW V +Q D + A
Sbjct: 338 --LCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAF 395
Query: 299 HPEMNLLAAG 308
+ E + + G
Sbjct: 396 NYEGDTIITG 405
Score = 206 (77.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 62/257 (24%), Positives = 113/257 (43%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHL 93
+LW G F H + + F+ L +G D K+W+ + + TL GH
Sbjct: 160 KLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHF 219
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
I ++ F+ +V+ S D T +W+ S + VL+GH + C F+ L+ +A
Sbjct: 220 AEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATA 279
Query: 154 SLDQTVRVWDI--GALRKKTVSPADDILRL-----SQM-NTDLFGGVDAVVKY------- 198
SLD++ +VWD G + D++L + Q+ T G V
Sbjct: 280 SLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLC 339
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
LEGH ++ F+ +++ + D+ ++W + +V L GH + + F+
Sbjct: 340 QLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQV--LEGHSDEIFSCAFNY 397
Query: 259 KQDIIVSNSEDKSIRVW 275
+ D I++ S+D + R+W
Sbjct: 398 EGDTIITGSKDNTCRIW 414
Score = 166 (63.5 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRC 85
ASL ++WD G + H+ V V F+ + L + D +V++ +C
Sbjct: 279 ASLDKSC-KVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQC 337
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
L L GH I V F+ + +++AS D+T R+W ++ C+ VL GH+ + +F+
Sbjct: 338 LCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNY 397
Query: 146 KEDLVVSASLDQTVRVW 162
+ D +++ S D T R+W
Sbjct: 398 EGDTIITGSKDNTCRIW 414
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 232 (86.7 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 310
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 370
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 371 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 423
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 424 TIRLWDI 430
Score = 221 (82.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 254 ISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 311
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 312 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 370 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 426
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 427 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 482
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 483 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 190 (71.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 80/301 (26%), Positives = 135/301 (44%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + + I++ L I++WD + H G V +
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQ 287
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 288 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 343
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 459
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 460 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 517
Query: 276 D 276
D
Sbjct: 518 D 518
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 152 (58.6 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 35/134 (26%), Positives = 61/134 (45%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I+++ G F+ H V + + + VSG D + VW+ L+ L
Sbjct: 86 GSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLK 145
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + V F E +V++ D ++ W+ ++ C L GH V + +E +
Sbjct: 146 GHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRL 205
Query: 151 VSASLDQTVRVWDI 164
++ + D +RVWDI
Sbjct: 206 ITGTADSELRVWDI 219
Score = 149 (57.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV + L +G D +K+W C +L H D + +QF +
Sbjct: 585 HKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFF 644
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+A D I+ W+ I L GH+ V C + P D VVSAS D+++R+W+
Sbjct: 645 TAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++ +G +QL+D GTL++ + HDG V + Q FV+GG D +K W++++
Sbjct: 464 VIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELV 523
Query: 84 RCLFTLLGHLDY--IRTVQFHHE-----Y-P--WIVSASD-DQTIRIWNWQSRTCISVLT 132
+ ++ L +R +Q + Y P +++ S D T++++ + L
Sbjct: 524 KDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLY 583
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDLF 189
GH V+C L+ + S D+ V++W D G + + D ++ L + + LF
Sbjct: 584 GHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLF 643
Query: 190 --GGVDAVVK 197
G D +K
Sbjct: 644 FTAGKDNKIK 653
Score = 138 (53.6 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 173 SPADDILRLSQMNTDLFGGVDAVVKYVLE--GHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L +S ++ + +K+ L GH V LI +G+ DR VK+
Sbjct: 553 SPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKI 612
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W ++ +L H ++V + F AK + + +D I+ WD K +QT H
Sbjct: 613 WGLDFGDCHR--SLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHH 670
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQK 349
W LA P + +++A HD + +++ RE P + R Y E ++
Sbjct: 671 QEVWCLALSPNGDYVVSASHDKSLRLWERTRE-PLILEEEREM----QREAEYEESVAKE 725
Query: 350 DTQVIPIRRPGSTSL 364
+ V+ G T L
Sbjct: 726 EQPVVAGETQGETGL 740
Score = 123 (48.4 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 46/170 (27%), Positives = 71/170 (41%)
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGALR--------KKTVSPAD---DILRLSQMNT 186
V+C + P + L+ + LD TV+V+ L+ K V D D ++ +
Sbjct: 547 VLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSA 606
Query: 187 DL---FGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
D G+D L HD V + F L + D ++K W + K +
Sbjct: 607 DRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQW--DADKFEHIQ 664
Query: 243 TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
TL GH V C+ D +VS S DKS+R+W+ T+ + RE R
Sbjct: 665 TLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILEEEREMQR 714
Score = 98 (39.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 35 LWDYRMG--TLIDRFDEHDGPVR----GVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFT 88
+WD R G LI + +H+ +R G+H L V G +D I++++
Sbjct: 49 VWDARKGEKVLILKGSKHESCLRPSPDGLH------LAV-GYEDGSIRIFSLLSGEASVA 101
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
GH + +Q+ +VS S D + +W+ + + + L GH V F +++
Sbjct: 102 FNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKN 161
Query: 149 LVVSASLDQTVRVWDI 164
L+V++ D V+ WD+
Sbjct: 162 LLVTSGKDTLVKWWDL 177
Score = 87 (35.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 24/122 (19%), Positives = 52/122 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR + F +SG + +K+WN +C+ T+ +Y F ++
Sbjct: 409 HRSDVRTLAFSSDNIAVLSGAAE-SVKIWNRSTLQCIRTM--DCEYALCSLFVPGDRQVI 465
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
+ +++++ S T + L H+ V + P + V+ D+ V+ WD ++
Sbjct: 466 VGTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKD 525
Query: 170 KT 171
++
Sbjct: 526 ES 527
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/78 (16%), Positives = 32/78 (41%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L + + + V + F ++ ++ S +++ WD H V G+
Sbjct: 141 LYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVS 200
Query: 62 SQPLFVSGGDDYKIKVWN 79
+ ++G D +++VW+
Sbjct: 201 EEKRLITGTADSELRVWD 218
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 231 (86.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 278
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 279 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 338
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 339 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 391
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 392 TIRLWDI 398
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 222 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 279
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 280 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 337
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 338 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 394
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 395 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 450
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 451 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 485
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 255
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 256 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 311
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 312 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 369
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 370 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 427
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 428 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 485
Query: 276 D 276
D
Sbjct: 486 D 486
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 231 (86.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 278
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 279 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 338
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 339 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 391
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 392 TIRLWDI 398
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 222 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 279
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 280 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 337
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 338 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 394
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 395 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 450
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 451 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 485
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 255
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 256 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 311
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 312 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 369
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 370 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 427
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 428 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 485
Query: 276 D 276
D
Sbjct: 486 D 486
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 230 (86.0 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 66/236 (27%), Positives = 97/236 (41%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V L F + + ++ ++LW F H PVR V F V+ +
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IKVW+ R L++L H ++R +F + IVS S+D+TI+IW+ S+ C++
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK----KTVSPADDILRLSQMNTD 187
+ + F P + SA D VR+WDI R + S + L
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS 242
Query: 188 LF-GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
L D VK Y L+GH V +F L SG D QV +WR
Sbjct: 243 LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Score = 230 (86.0 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 68/260 (26%), Positives = 116/260 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW + R+ H V + F L S D +++W H
Sbjct: 42 LMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+R+V F + ++V+AS+D++I++W+ + + L H H+V CA F P L+VS
Sbjct: 102 TAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 161
Query: 153 ASLDQTVRVWDIGALRKKTVSPADD------ILRLSQMNTDLFG-GVDAVVKY------- 198
S D+T+++WD + K+ V+ D + S T + G D V+
Sbjct: 162 CSEDKTIKIWDTTS--KQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNR 219
Query: 199 VLEG---HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+L+ H GVN +FHP+ +V+ + D VK+ + E + + TL+GH V V
Sbjct: 220 LLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRL--IYTLQGHTGPVFTVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
F ++ S D + VW
Sbjct: 278 FSKDGELFTSGGADAQVLVW 297
Score = 178 (67.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 62/293 (21%), Positives = 123/293 (41%)
Query: 43 LIDR-FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+++R F H + F + + D + +W+ K H + +GH D + ++QF
Sbjct: 9 ILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+ + SAS D+T+R+W + S H V F +V+AS D++++V
Sbjct: 69 SPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKV 128
Query: 162 WD------IGALRKKT-------VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV- 207
W + +L + T SP D L +S D K + V
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Query: 208 --NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
N+ F P I S D V++W + + + + H V+C+ FH + +V+
Sbjct: 188 FANFVDFSPNGTCIASAGSDHAVRIWDIRMNRL--LQHYQVHSCGVNCLSFHPSGNSLVT 245
Query: 266 NSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFK 317
S D ++++ D+ + + T + + ++ + L +G D+ ++V++
Sbjct: 246 ASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Score = 176 (67.0 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 53/200 (26%), Positives = 89/200 (44%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHK 61
++F+ + V+ + F + +++ + I++W YR L + H VR F
Sbjct: 96 SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLY-RHTHWVRCAKFSP 154
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
L VS +D IK+W+ +C+ + + V F I SA D +RIW+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWD 214
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL 179
+ + H+ V C SFHP + +V+AS D TV++ D+ G L +
Sbjct: 215 IRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVF 274
Query: 180 RLS-QMNTDLF--GGVDAVV 196
+S + +LF GG DA V
Sbjct: 275 TVSFSKDGELFTSGGADAQV 294
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 231 (86.4 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 297
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 298 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 357
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 358 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 410
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 411 TIRLWDI 417
Score = 220 (82.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 241 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 298
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 299 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 356
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 357 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 413
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 414 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 469
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 470 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 504
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 217 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 274
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 275 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 330
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 331 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 388
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 389 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 446
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 447 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 504
Query: 276 D 276
D
Sbjct: 505 D 505
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 231 (86.4 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 298
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 299 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 358
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 359 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 411
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 412 TIRLWDI 418
Score = 220 (82.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 242 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 299
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 300 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 357
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 358 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 414
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 415 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 470
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 471 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 505
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 218 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 275
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 276 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 331
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 332 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 389
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 390 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 447
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 448 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 505
Query: 276 D 276
D
Sbjct: 506 D 506
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 231 (86.4 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 310
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 370
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 371 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 423
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 424 TIRLWDI 430
Score = 220 (82.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 254 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 311
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 312 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 370 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 426
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 427 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 482
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 483 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 192 (72.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 287
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 288 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 343
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 459
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 460 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 517
Query: 276 D 276
D
Sbjct: 518 D 518
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 231 (86.4 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 310
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVD 370
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 371 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 423
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 424 TIRLWDI 430
Score = 220 (82.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 254 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 311
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 312 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 370 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 426
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 427 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 482
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 483 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 192 (72.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 287
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 288 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 343
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 459
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 460 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 517
Query: 276 D 276
D
Sbjct: 518 D 518
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 274
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 334
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 335 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 388
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 389 IRLWDI 394
Score = 203 (76.5 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 218 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGE 275
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 276 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 333
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 334 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 390
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 391 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLMAALDPRAPAGT 446
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 447 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 481
Score = 185 (70.2 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ 251
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 252 Y--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 307
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 308 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 365
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 366 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 423
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 424 AYDGKIKVWDLMAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 481
Query: 276 D 276
D
Sbjct: 482 D 482
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 230 (86.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 274
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 334
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 335 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 388
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 389 IRLWDI 394
Score = 203 (76.5 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 218 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGE 275
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 276 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 333
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 334 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 390
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 391 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLIAALDPRAPAGT 446
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 447 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 481
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ 251
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 252 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 307
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 308 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 365
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 366 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 423
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 424 AYDGKIKVWDLIAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 481
Query: 276 D 276
D
Sbjct: 482 D 482
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 332
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 333 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 392
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 393 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 446
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 447 IRLWDI 452
Score = 204 (76.9 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 276 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGE 333
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 334 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 391
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 392 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 448
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 449 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGT 504
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 505 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 539
Score = 185 (70.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 252 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 309
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 310 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 365
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 366 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 423
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 424 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 481
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 482 AYDGKIKVWDLVAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 539
Query: 276 D 276
D
Sbjct: 540 D 540
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 223 (83.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 43 LIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH 102
L+ + H + F + D +K+WN C TL GH + + +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ +VSASDD+T++I+ + L GHN+YV C +F+P+ LVVS S D++VR+W
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 163 DIGA-LRKKTVSPADDILRLSQMNTD--LF--GGVDAVV-----------KYVLEGHDRG 206
D+ + KT+ D + N D L G D +V K +++ +
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V + F P I++ D +KLW ++ K + T GH N+ C+
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHENSKYCI 304
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V +SF+ I + + G++++WD G I D+ + PV V F + +
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYIL 272
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W++ + L GH + Y F WI+S S+D I IWN Q+
Sbjct: 273 ASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQT 332
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
R + L GH V+ + HP ++++ S +L D + +W
Sbjct: 333 REIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 173 (66.0 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V +++ S ++++ +++++ + H+ V +F+ L VSG
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +++W+ K C+ TL H D + V F+ + I S S D +RIW+ + CI L
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 132 TG-HNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
N V F P +++++LD T+++WD
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 64/237 (27%), Positives = 111/237 (46%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NYK+ C TL GH I + +F ++ ++S D+T++IWN C LTGH V
Sbjct: 76 NYKL-MC--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVD 193
++ VVSAS D+T+++++I R KT+ ++ + N + G D
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 194 AVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
V+ L H V+ +F+ LI SG+ D V++W + + T
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC--IKT 250
Query: 244 LRGHMNN-VSCVMFHAKQDIIVSNSEDKSIRVWDVTK-RTGVQTFRREHDRFWILAS 298
L N V+ V F I++++ D ++++WD +K +T Q E+ ++ I A+
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Score = 170 (64.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLI-DR-FDEHDGPVRGVH 58
++ E + + F ++ S +++W+ M +I +R H V +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN--MDHMICERTLTGHKLGVNDIA 136
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ VS DD +K++ R TL GH +Y+ F+ + +VS S D+++R
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
IW+ ++ CI L H+ V SF+ L+ S S D VR+WD
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/120 (29%), Positives = 67/120 (55%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ + L GH GVN A+ +VS +DD+ +K++ + ++ + TL+GH N V C
Sbjct: 120 ICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTK--TLKGHNNYVFCC 177
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
F+ + ++VS S D+S+R+WDV ++T D ++ + + +L+A+G G++
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Score = 159 (61.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 38/168 (22%), Positives = 83/168 (49%)
Query: 2 LTK-FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+TK + +N V +F+ + +++ +++WD + G I H PV V F+
Sbjct: 163 MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN 222
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRI 119
+ L SG D +++W+ +C+ TL+ + + V+F +I++++ D T+++
Sbjct: 223 RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKL 282
Query: 120 WNWQSRTCISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
W++ + TGH + Y + A+F ++S S D + +W++
Sbjct: 283 WDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 27/119 (22%), Positives = 61/119 (51%)
Query: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
G + + LEGH + ++ A F P + + + D+ VK+W M+ TL GH
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICER--TLTGHKL 130
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
V+ + + + +VS S+DK+++++++ +T + ++ + +P+ +L+ +G
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Score = 104 (41.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V + F P I++ D +KLW ++ K + T GH N+ C+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHENSKYCIF 305
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS--HPEMNLLAAG 308
+ I+S SED I +W++ R VQ H + +LAS HP N++A+G
Sbjct: 306 ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG-HTQP-VLASDCHPVQNIIASG 361
Score = 76 (31.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS--EDKSIRVW 275
I+SG++D ++ +W + + V L GH V H Q+II S + D I +W
Sbjct: 316 IISGSEDCKIYIWNLQTREI--VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 62 (26.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
LEGH + V + HP +I SGA D ++ +WR
Sbjct: 339 LEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWR 373
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 223 (83.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 43 LIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH 102
L+ + H + F + D +K+WN C TL GH + + +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ +VSASDD+T++I+ + L GHN+YV C +F+P+ LVVS S D++VR+W
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 163 DIGA-LRKKTVSPADDILRLSQMNTD--LF--GGVDAVV-----------KYVLEGHDRG 206
D+ + KT+ D + N D L G D +V K +++ +
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP 258
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V + F P I++ D +KLW ++ K + T GH N+ C+
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHENSKYCI 304
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQPLFV 67
S+ V +SF+ I + + G++++WD G I D+ + PV V F + +
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYIL 272
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQS 124
+ D +K+W++ + L GH + Y F WI+S S+D I IWN Q+
Sbjct: 273 ASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQT 332
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
R + L GH V+ + HP ++++ S +L D + +W
Sbjct: 333 REIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 173 (66.0 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V +++ S ++++ +++++ + H+ V +F+ L VSG
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +++W+ K C+ TL H D + V F+ + I S S D +RIW+ + CI L
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 132 TG-HNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
N V F P +++++LD T+++WD
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 64/237 (27%), Positives = 111/237 (46%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NYK+ C TL GH I + +F ++ ++S D+T++IWN C LTGH V
Sbjct: 76 NYKL-MC--TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGV 132
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVD 193
++ VVSAS D+T+++++I R KT+ ++ + N + G D
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 194 AVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
V+ L H V+ +F+ LI SG+ D V++W + + T
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC--IKT 250
Query: 244 LRGHMNN-VSCVMFHAKQDIIVSNSEDKSIRVWDVTK-RTGVQTFRREHDRFWILAS 298
L N V+ V F I++++ D ++++WD +K +T Q E+ ++ I A+
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Score = 170 (64.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLI-DR-FDEHDGPVRGVH 58
++ E + + F ++ S +++W+ M +I +R H V +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN--MDHMICERTLTGHKLGVNDIA 136
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ VS DD +K++ R TL GH +Y+ F+ + +VS S D+++R
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
IW+ ++ CI L H+ V SF+ L+ S S D VR+WD
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/120 (29%), Positives = 67/120 (55%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ + L GH GVN A+ +VS +DD+ +K++ + ++ + TL+GH N V C
Sbjct: 120 ICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTK--TLKGHNNYVFCC 177
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
F+ + ++VS S D+S+R+WDV ++T D ++ + + +L+A+G G++
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Score = 159 (61.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 38/168 (22%), Positives = 83/168 (49%)
Query: 2 LTK-FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+TK + +N V +F+ + +++ +++WD + G I H PV V F+
Sbjct: 163 MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN 222
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDY-IRTVQFHHEYPWIVSASDDQTIRI 119
+ L SG D +++W+ +C+ TL+ + + V+F +I++++ D T+++
Sbjct: 223 RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKL 282
Query: 120 WNWQSRTCISVLTGHNH--YVMCASFHPKEDL-VVSASLDQTVRVWDI 164
W++ + TGH + Y + A+F ++S S D + +W++
Sbjct: 283 WDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 27/119 (22%), Positives = 61/119 (51%)
Query: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
G + + LEGH + ++ A F P + + + D+ VK+W M+ TL GH
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICER--TLTGHKL 130
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
V+ + + + +VS S+DK+++++++ +T + ++ + +P+ +L+ +G
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Score = 104 (41.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+K +++ + V + F P I++ D +KLW ++ K + T GH N+ C+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT--GHENSKYCIF 305
Query: 256 FHAKQD---IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS--HPEMNLLAAG 308
+ I+S SED I +W++ R VQ H + +LAS HP N++A+G
Sbjct: 306 ANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG-HTQP-VLASDCHPVQNIIASG 361
Score = 76 (31.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS--EDKSIRVW 275
I+SG++D ++ +W + + V L GH V H Q+II S + D I +W
Sbjct: 316 IISGSEDCKIYIWNLQTREI--VQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 62 (26.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
LEGH + V + HP +I SGA D ++ +WR
Sbjct: 339 LEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWR 373
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 337
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 338 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 397
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 398 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 451
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 452 IRLWDI 457
Score = 204 (76.9 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 281 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGE 338
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 339 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 396
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 397 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 453
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 454 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGT 509
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 510 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 544
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 257 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ 314
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 315 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 370
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 371 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 428
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 429 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 486
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 487 AYDGKIKVWDLVAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 544
Query: 276 D 276
D
Sbjct: 545 D 545
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 229 (85.7 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 283
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 284 EVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 343
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 344 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 396
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 397 TIRLWDI 403
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 76/275 (27%), Positives = 124/275 (45%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+R+W+ +
Sbjct: 227 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVRVWDVNTGE 284
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 285 VLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 342
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 343 DFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 399
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQT 285
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R T
Sbjct: 400 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAST 455
Query: 286 F--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 456 LCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 490
Score = 191 (72.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + + +S KG L + ++ I++ L I++WD + H G V +
Sbjct: 203 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 260
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + V+G D ++VW+ L TL+ H + + ++F + +V+ S D++I
Sbjct: 261 Y--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIA 316
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 317 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNG 374
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 375 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 432
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D I+S+S D +I +W
Sbjct: 433 AYDGKIKVWDLQAALDPRA-PASTLCLRTLVEHSGRV-FRLQFDEFQIISSSHDDTILIW 490
Query: 276 D 276
D
Sbjct: 491 D 491
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 229 (85.7 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 60/187 (32%), Positives = 93/187 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
I+S D +I+IW+ Q+ C+ +LTGH V+C + E ++V+ S D TVRVWD+ G
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNSG 295
Query: 166 ALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L N D+ D ++ VL GH VN
Sbjct: 296 EVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVD 355
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 356 FDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 408
Query: 271 SIRVWDV 277
+IR+WD+
Sbjct: 409 TIRLWDI 415
Score = 182 (69.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
I+ +++WD G +++ H+ V +H L V+ D I VW+
Sbjct: 278 IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAV--LHLRFCNGLMVTCSKDRSIAVWDMASP 335
Query: 84 RCLF---TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
+ L+GH + V F +Y IVSAS D+TI++W+ + + L GH + C
Sbjct: 336 TDISLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC 393
Query: 141 ASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTD--LFGGVDAVV 196
+ ++ LVVS S D T+R+WDI GA + + ++++R + + + G D +
Sbjct: 394 LQY--RDRLVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSGAYDGKI 450
Query: 197 K 197
K
Sbjct: 451 K 451
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 46/137 (33%), Positives = 61/137 (44%)
Query: 33 IQLWDYRMGTLIDR---FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL 89
I +WD T I H V V F VS D IKVW+ + TL
Sbjct: 327 IAVWDMASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 90 LGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDL 149
GH I +Q+ +VS S D TIR+W+ + C+ VL GH V C F K
Sbjct: 385 NGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 440
Query: 150 VVSASLDQTVRVWDIGA 166
+VS + D ++VWD+ A
Sbjct: 441 IVSGAYDGKIKVWDLQA 457
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F K +I+++ I++W + + H + + + L VSG
Sbjct: 351 VNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSS 406
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ-------- 123
D I++W+ + CL L GH + +R ++F ++ IVS + D I++W+ Q
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAP 464
Query: 124 -SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
S C+ L H+ V F E ++S+S D T+ +WD
Sbjct: 465 ASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWD 503
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 433
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 434 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 487
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 488 IRLWDI 493
Score = 206 (77.6 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 75/287 (26%), Positives = 126/287 (43%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 317 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGE 374
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 375 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 432
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 433 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 489
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 490 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGT 545
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVS 328
R EH E ++++ HD ++++ + A A S
Sbjct: 546 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAES 592
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 350
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 351 Y--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 522
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 523 AYDGKIKVWDLVAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 580
Query: 276 D 276
D
Sbjct: 581 D 581
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 433
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 434 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 487
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 488 IRLWDI 493
Score = 205 (77.2 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 74/285 (25%), Positives = 125/285 (43%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGE 374
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 375 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 432
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 433 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 489
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 490 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLMAALDPRAPAGT 545
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFA 326
R EH E ++++ HD ++++ + A A
Sbjct: 546 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAHA 590
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ 350
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 351 Y--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 522
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 523 AYDGKIKVWDLMAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 580
Query: 276 D 276
D
Sbjct: 581 D 581
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 373
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 433
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 434 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 487
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 488 IRLWDI 493
Score = 204 (76.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 317 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGE 374
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 375 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 432
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 433 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 489
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 490 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGT 545
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 546 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 350
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 351 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 522
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 523 AYDGKIKVWDLVAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 580
Query: 276 D 276
D
Sbjct: 581 D 581
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 373
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 433
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 434 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 487
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 488 IRLWDI 493
Score = 204 (76.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNTGE 374
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 375 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 432
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 433 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 489
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 490 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLVAALDPRAPAGT 545
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 546 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
Score = 184 (69.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ 350
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 351 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 522
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 523 AYDGKIKVWDLVAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 580
Query: 276 D 276
D
Sbjct: 581 D 581
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 60/186 (32%), Positives = 92/186 (49%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ + C +LTGH V+C + E ++++ S D TVRVWD+ G
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ D ++ VL GH VN
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 433
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F IVS + DR +K+W N + V TL GH ++C+ + + ++VS S D +
Sbjct: 434 FDDKY--IVSASGDRTIKVW--NTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 487
Query: 272 IRVWDV 277
IR+WD+
Sbjct: 488 IRLWDI 493
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 72/275 (26%), Positives = 122/275 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG D IK+W+ C L GH + +Q+ I++ S D T+R+W+ +
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--IITGSSDSTVRVWDVNAGE 374
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDIL 179
++ L H V+ F+ ++V+ S D+++ VWD+ + LR+ V A +++
Sbjct: 375 MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 432
Query: 180 RLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
G D +K +V L GH RG+ + L +VSG+ D ++
Sbjct: 433 DFDDKYIVSASG-DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIR 489
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR------TGV 283
LW + E A + L GH V C+ F K+ IVS + D I+VWD+ G
Sbjct: 490 LWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLMAALDPRAPAGT 545
Query: 284 QTFRR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
R EH E ++++ HD ++++
Sbjct: 546 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 580
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 80/301 (26%), Positives = 136/301 (45%)
Query: 2 LTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVH 58
L + +S KG L + ++ I++ L I++WD H G V +
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQ 350
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
+ + + ++G D ++VW+ L TL+ H + + ++F++ +V+ S D++I
Sbjct: 351 Y--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIA 406
Query: 119 IWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP 174
+W+ S T I+ VL GH V F K +VSAS D+T++VW+ +T++
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 175 ADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSG 222
+ Q L G D ++ VLEGH+ V F IVSG
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSG 522
Query: 223 ADDRQVKLWRMN---ETKAWEVDTL--RGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
A D ++K+W + + +A TL R + + V F + D IVS+S D +I +W
Sbjct: 523 AYDGKIKVWDLMAALDPRA-PAGTLCLRTLVEHSGRV-FRLQFDEFQIVSSSHDDTILIW 580
Query: 276 D 276
D
Sbjct: 581 D 581
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 206 (77.6 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW I H PV V + + L V+G I+VW+ + + L TL+GH
Sbjct: 49 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 108
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + C+ GH+ V C F P + S
Sbjct: 109 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 168
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 169 AADDHTVKLWDLTA 182
Score = 203 (76.5 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + ++ I+A SG I++WD ++ H + + FH SG
Sbjct: 70 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 129
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F GH +R ++F + W+ SA+DD T+++W+ + +S
Sbjct: 130 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 189
Query: 132 TGHNHYVMCASFHPKEDLV 150
GH V FHP E L+
Sbjct: 190 PGHTGPVNVVEFHPNEYLL 208
Score = 180 (68.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/165 (29%), Positives = 74/165 (44%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
L +GGDD ++ +W+ C+ +L GH + +V+ + IV+ S +IR+W+ ++
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 98
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---GAL-RKKTVSPADDILR 180
+ L GH + FHP + V S S D +++WDI G + R + S A LR
Sbjct: 99 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 158
Query: 181 LSQMNTDLFGGVD---------AVVKYVLE--GHDRGVNWAAFHP 214
S L D K + E GH VN FHP
Sbjct: 159 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G DD +V LW +N+ + +L GH + V V + +++IV+ S+ SIRVWD+
Sbjct: 39 LLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 96
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAG-HDSGMIVFKLERERPAFAVSGDS 331
++T L HP +A+G D+ + ++ + R+ F G S
Sbjct: 97 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHS 151
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L GH V + LIV+G+ +++W + K + TL GH N+ + FH
Sbjct: 63 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLMGHKANICSLDFHPY 120
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHD 310
+ + S S+D +I++WD+ ++ V +R L P+ LA+ D
Sbjct: 121 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 171
Score = 122 (48.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 34/134 (25%), Positives = 58/134 (43%)
Query: 173 SPADDILRLSQMNTDLFGGVDAV-VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
+P + I+ SQ + ++A + L GH + FHP + SG+ D +KLW
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 232 RMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
+ V RGH V C+ F + S ++D ++++WD+T + F
Sbjct: 137 DIRRKGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG 194
Query: 292 RFWILASHPEMNLL 305
++ HP LL
Sbjct: 195 PVNVVEFHPNEYLL 208
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 225 (84.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 64/255 (25%), Positives = 115/255 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + F +G D IK+W+ + +L GH+ +R V ++P++
Sbjct: 171 HLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLF 230
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD------ 163
S +D+ ++ W+ + I GH V + HP D++ ++ D T R+WD
Sbjct: 231 SCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKAN 290
Query: 164 IGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY----------VLEGHDRGVNWAAFH 213
+ L T + A + + + + G D+ V+ L H + V H
Sbjct: 291 VHTLTGHTNTVASVVAQATNPQI-ITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLH 349
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P+L + S + D +K WR E K V + GH + V+C+ ++ + ++VS ++ ++
Sbjct: 350 PSLYMFASASPDN-IKQWRCPEGKF--VQNISGHTSIVNCMAANS-EGVLVSGGDNGTMF 405
Query: 274 VWDVTKRTGVQTFRR 288
WD RTG F+R
Sbjct: 406 FWDW--RTGYN-FQR 417
Score = 199 (75.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W VI++WD G L H VRGV P S G+
Sbjct: 175 VRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE 234
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + ++ H + ++ D T RIW+ +++ + L
Sbjct: 235 DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTL 294
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
TGH + V +++ S D TVR+WD+ A
Sbjct: 295 TGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAA 329
Score = 175 (66.7 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 36/151 (23%), Positives = 69/151 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+G++ +K P++ + ++ WD +I + H V + H + + + G
Sbjct: 217 VRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGR 276
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++W+ + + TL GH + + +V P I++ S D T+R+W+ + + L
Sbjct: 277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTL 336
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
T H V HP + SAS D ++ W
Sbjct: 337 TNHKKSVRSIVLHPSLYMFASASPDN-IKQW 366
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/256 (24%), Positives = 107/256 (41%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K+ R + GHL ++R + W + + D+ I+IW+ S LTGH
Sbjct: 158 WHAPWKLSR---VISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHV 214
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDILRLS 182
V + K + S D+ V+ WD+ A+ + P D+L S
Sbjct: 215 STVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATS 274
Query: 183 QMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
++ ++ + L GH V T P I++G+ D V+LW + K+
Sbjct: 275 GRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKS-- 332
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V ++ H + S S D +I+ W + VQ +A++
Sbjct: 333 VCTLTNHKKSVRSIVLHPSLYMFASASPD-NIKQWRCPEGKFVQNISGHTSIVNCMAANS 391
Query: 301 EMNLLAAGHDSGMIVF 316
E +L +G D+G + F
Sbjct: 392 E-GVLVSGGDNGTMFF 406
Score = 132 (51.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 39/164 (23%), Positives = 68/164 (41%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P I+ H ++LWD G + H VR + H S +F S
Sbjct: 298 TNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFAS 357
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
D IK W + + + GH + + + E +VS D+ T+ W+W++
Sbjct: 358 ASPD-NIKQWRCPEGKFVQNISGHTSIVNCMAANSEGV-LVSGGDNGTMFFWDWRTGYNF 415
Query: 125 -RTCISVLTGHNH-----YVMCASFHPKEDLVVSASLDQTVRVW 162
R V G + MC F +++A D+T++V+
Sbjct: 416 QRFQAPVQPGSMDSEAGIFAMC--FDQSGSRLITAEADKTIKVY 457
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 503 ESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN--------GVFIYTTLNH--IK 552
+SV L+ H KK V LH ++ + + A DN G F+ H I
Sbjct: 331 KSVCTLTNH------KKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIV 384
Query: 553 YCLPNGDSGII 563
C+ G++
Sbjct: 385 NCMAANSEGVL 395
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 228 (85.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 79/287 (27%), Positives = 132/287 (45%)
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
HK + + SG I++ N L GH + + V+ H +VS S D+T+R+
Sbjct: 360 HKDRIITTSGSGT--IQIHNAITGVLEARLEGHKEGVWAVKIHENT--LVSGSIDKTVRV 415
Query: 120 WNWQSRTCISVLTGHNHYVMCASF--------H------PKEDLVVSASLDQTVRVWDIG 165
WN + C + GH + C H P + +VS S D T+RVW
Sbjct: 416 WNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWK-- 473
Query: 166 ALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADD 225
L K T P L + + D + V + L GH V + + + +VSG+ D
Sbjct: 474 -LPKNTDPP---YLPDNTNSIDRWEKNPYFV-HTLIGHTDSVRTISGYGDI--LVSGSYD 526
Query: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
+++WR++ + + LRGH + V++ +++I +S S DKSIRVWD++ TG
Sbjct: 527 SSIRIWRVSTGEC--LYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLS--TGTCK 582
Query: 286 FRRE-HDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDS 331
+ E HD F L + + L++ DS + ++ L +P + +S
Sbjct: 583 YVLEGHDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNS 629
Score = 198 (74.8 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 70/281 (24%), Positives = 121/281 (43%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
+ L H R I+ + SG IQ+ + G L R + H V V H++ VSG
Sbjct: 354 ITSLLLHKDR--IITTSGSGTIQIHNAITGVLEARLEGHKEGVWAVKIHENT--LVSGSI 409
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQF-------HH-------EYPWIVSASDDQTI 117
D ++VWN + +C GH+ IR ++ H + P+IVS S D T+
Sbjct: 410 DKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTL 469
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA-D 176
R+W T L + + + K V + T V I VS + D
Sbjct: 470 RVWKLPKNTDPPYLPDNTNSI---DRWEKNPYFVHTLIGHTDSVRTISGYGDILVSGSYD 526
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
+R+ +++T + + Y L GH + + P + +SG+ D+ +++W ++
Sbjct: 527 SSIRIWRVSTG-----ECL--YHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
V L GH + + + Q+ ++S S D +IR+WD+
Sbjct: 580 TCKYV--LEGH--DAFVTLLNVFQNRLISGSADSTIRIWDL 616
Score = 180 (68.4 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 55/192 (28%), Positives = 94/192 (48%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWD---YRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
RV L ++ P++ + +S I W+ Y + TLI H VR + + + V
Sbjct: 470 RVWKLPKNTDPPYLPDNTNS--IDRWEKNPYFVHTLIG----HTDSVRTISGYGD--ILV 521
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
SG D I++W CL+ L GH I +V + E +S S D++IR+W+ + TC
Sbjct: 522 SGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTC 581
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
VL GH+ +V + ++ ++S S D T+R+WD+ + V P++ S ++ +
Sbjct: 582 KYVLEGHDAFVTLLNVF--QNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDE 639
Query: 188 --LFGGVDAVVK 197
+ G D VK
Sbjct: 640 HKIISGNDGSVK 651
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 53/187 (28%), Positives = 84/187 (44%)
Query: 114 DQTIRIWNWQSRTC-ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA------ 166
D T I W+ + L GH V S + D++VS S D ++R+W +
Sbjct: 485 DNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYG--DILVSGSYDSSIRIWRVSTGECLYH 542
Query: 167 LRKKTVSPADDILRLSQMNTDLFGGVDAVV----------KYVLEGHDRGVNWA-AFHPT 215
LR ++ +L + N + G +D + KYVLEGHD V F
Sbjct: 543 LRGHSLR-IYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNR 601
Query: 216 LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
L +SG+ D +++W +N K V L + +S F + + I+S + D S+++W
Sbjct: 602 L---ISGSADSTIRIWDLNTGKPLMV--LPSNSGYISS--FVSDEHKIISGN-DGSVKLW 653
Query: 276 DVTKRTG 282
DV RTG
Sbjct: 654 DV--RTG 658
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 225 (84.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 63/243 (25%), Positives = 104/243 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR V F SGG D IK+W+ + +L GH+ +R V+ +P++
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLF 242
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD------ 163
S +D+ ++ W+ + I GH V S HP D++V+ + D T RVWD
Sbjct: 243 SGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQ 302
Query: 164 IGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY----------VLEGHDRGVNWAAFH 213
+ T + AD + + + DA V+ L H + V H
Sbjct: 303 VHCFAGHTNTVADVVCQSVDPQV-ITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIH 361
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P L + S + D +K W++ K + L GH N + + ++VS +++ S+
Sbjct: 362 PRLNMFASASPDN-IKQWKL--PKGEFMQNLSGH-NAIINTLSSNDDGVVVSGADNGSLC 417
Query: 274 VWD 276
WD
Sbjct: 418 FWD 420
Score = 209 (78.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 58/237 (24%), Positives = 109/237 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + W + +I++WD G L H VR V P SGG+
Sbjct: 187 VRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGE 246
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL ++ + H +V+ + D T R+W+ +++ +
Sbjct: 247 DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCF 306
Query: 132 TGHNHYV---MCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMNT- 186
GH + V +C S P+ V++AS D TVR+WD+ A R T++ +R ++
Sbjct: 307 AGHTNTVADVVCQSVDPQ---VITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPR 363
Query: 187 -DLFGGV--DAVVKYVL---------EGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
++F D + ++ L GH+ +N + + ++VSGAD+ + W
Sbjct: 364 LNMFASASPDNIKQWKLPKGEFMQNLSGHNAIINTLSSNDD-GVVVSGADNGSLCFW 419
Score = 187 (70.9 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 54/206 (26%), Positives = 93/206 (45%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI--LRLSQMN 185
V +GH +V P S D+ +++WD+ G L+ + +++S +
Sbjct: 179 VASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRH 238
Query: 186 TDLF-GGVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
LF GG D VK + LE GH V + HP+L ++V+ A D ++W M
Sbjct: 239 PFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMR 298
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
TKA +V GH N V+ V+ + +++ S D ++R+WD+ + T
Sbjct: 299 -TKA-QVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVR 356
Query: 295 ILASHPEMNLLAAGHDSGMIVFKLER 320
L HP +N+ A+ + +KL +
Sbjct: 357 ALTIHPRLNMFASASPDNIKQWKLPK 382
Score = 161 (61.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 57/256 (22%), Positives = 109/256 (42%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R GH ++R V W S D+ I+IW+ S LTGH
Sbjct: 170 WHAPWKLYR---VASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHI 226
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V P+ + S D+ V+ WD+ A++ +V P+ D+L
Sbjct: 227 SSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTC 286
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
++ +T + + + GH V P +++ + D V+LW + ++
Sbjct: 287 ARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRS-- 344
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
+ TL H +V + H + ++ S S D +I+ W + K +Q + L+S+
Sbjct: 345 MCTLTHHKKSVRALTIHPRLNMFASASPD-NIKQWKLPKGEFMQNLSGHNAIINTLSSND 403
Query: 301 EMNLLAAGHDSGMIVF 316
+ ++ +G D+G + F
Sbjct: 404 D-GVVVSGADNGSLCF 418
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/166 (24%), Positives = 72/166 (43%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F +N V + S P ++ + H ++LWD G + H VR + H
Sbjct: 306 FAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLN 365
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+F S D IK W + L GH I T+ + + +VS +D+ ++ W+W+S
Sbjct: 366 MFASASPD-NIKQWKLPKGEFMQNLSGHNAIINTLSSNDDGV-VVSGADNGSLCFWDWRS 423
Query: 125 RTCISVLT-----G--HNHYVMCASFHPKEDL-VVSASLDQTVRVW 162
C + G + + AS K L +++A D+T++++
Sbjct: 424 GFCFQKIQTKPQPGSIESEAGIYASCFDKTGLRLITAEADKTIKMY 469
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 166 (63.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 65 LFVSGGDDYKIKVWNYKMHR---CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
LF +G D I++W+ H+ + ++ H D++ V ++SAS D T+++WN
Sbjct: 45 LFTAGRDSI-IRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWN 103
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVS 173
C+S L H YV ++ ++LV SA LD+ + +WD+ L T S
Sbjct: 104 AHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTAS 155
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 38/156 (24%), Positives = 69/156 (44%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++++ +++W+ G + H V+ + + K + L S G D +I +W+
Sbjct: 90 LISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTL 149
Query: 84 RCLF---------TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV--LT 132
L +L G+ D I ++ + IVS S ++ +R+W+ RTC + L
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMKLK 207
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
GH V H +S S D T+R+W +G R
Sbjct: 208 GHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQR 243
Score = 113 (44.8 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 186 TDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
T L + V L G+ + A + +IVSG+ ++ +++W T A ++ L+
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPR-TCA-KLMKLK 207
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEM-NL 304
GH +NV ++ H +S S D +IR+W + ++ + T+R + W L + ++
Sbjct: 208 GHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHV 267
Query: 305 LAAGHD 310
+ G D
Sbjct: 268 YSGGRD 273
Score = 49 (22.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/102 (23%), Positives = 47/102 (46%)
Query: 244 LRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT-----FRREHDRFWILAS 298
++G + + C + + K+ I+ ++ + ++ WDV K V+ F E + + +
Sbjct: 357 IKGGASIIQCHILNDKRHILTKDTNN-NVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVY 415
Query: 299 HPEMNLLAAGHDSGMIVFKLERERPAFA--VSG-DSLFYAKD 337
P N + +GM+ L+ E FA VS D+ F + D
Sbjct: 416 VP--NWFSVDLKTGMLTITLD-ESDCFAAWVSAKDAGFSSPD 454
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 166 (63.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 65 LFVSGGDDYKIKVWNYKMHR---CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
LF +G D I++W+ H+ + ++ H D++ V ++SAS D T+++WN
Sbjct: 45 LFTAGRDSI-IRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWN 103
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVS 173
C+S L H YV ++ ++LV SA LD+ + +WD+ L T S
Sbjct: 104 AHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTAS 155
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 38/156 (24%), Positives = 69/156 (44%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++++ +++W+ G + H V+ + + K + L S G D +I +W+
Sbjct: 90 LISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTL 149
Query: 84 RCLF---------TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV--LT 132
L +L G+ D I ++ + IVS S ++ +R+W+ RTC + L
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMKLK 207
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
GH V H +S S D T+R+W +G R
Sbjct: 208 GHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQR 243
Score = 113 (44.8 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 186 TDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
T L + V L G+ + A + +IVSG+ ++ +++W T A ++ L+
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPR-TCA-KLMKLK 207
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEM-NL 304
GH +NV ++ H +S S D +IR+W + ++ + T+R + W L + ++
Sbjct: 208 GHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHV 267
Query: 305 LAAGHD 310
+ G D
Sbjct: 268 YSGGRD 273
Score = 49 (22.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/102 (23%), Positives = 47/102 (46%)
Query: 244 LRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT-----FRREHDRFWILAS 298
++G + + C + + K+ I+ ++ + ++ WDV K V+ F E + + +
Sbjct: 357 IKGGASIIQCHILNDKRHILTKDTNN-NVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVY 415
Query: 299 HPEMNLLAAGHDSGMIVFKLERERPAFA--VSG-DSLFYAKD 337
P N + +GM+ L+ E FA VS D+ F + D
Sbjct: 416 VP--NWFSVDLKTGMLTITLD-ESDCFAAWVSAKDAGFSSPD 454
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 181 (68.8 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 56/209 (26%), Positives = 100/209 (47%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN-WQSRTCISVLTGHNHYVMCASFH 144
+ L GH I T +FH E ++S+ D+ I IW ++ + ++GH+ VM A F
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 145 PKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI--LRLSQMNTDLF--GGVDAVVK- 197
P + + S D+T+ WDI G +++ + + ++ S+ L G D +K
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 198 ---------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
+ LE + V F T ++SG D +VK+W + + + LRGH
Sbjct: 168 WDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV--LHHLRGHS 224
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
+ ++ + + D I++N+ D ++RVWDV
Sbjct: 225 DTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Score = 167 (63.8 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 37/133 (27%), Positives = 61/133 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVH-FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+ WD G RF H V V + Q L SG DD IK+W+ + TL
Sbjct: 122 LAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES 181
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
+ V F ++S D ++IW+ + + + L GH+ + S P+ D ++
Sbjct: 182 PFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFIL 240
Query: 152 SASLDQTVRVWDI 164
+ ++D T+RVWD+
Sbjct: 241 TNAMDNTLRVWDV 253
Score = 166 (63.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 4 KFETKSNRVKGLSFHSKRPWILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
+F+ N V + + +L S I++WD R E V V F +
Sbjct: 135 RFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL-ESPFQVTAVCFGDT 193
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
+SGG D ++K+W+ + L L GH D I + E +I++ + D T+R+W+
Sbjct: 194 GEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Query: 123 Q----SRTCISVLTGHNH-----YVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
+ C+ V GH H + CA + P D + S S D+ V +WD+ R
Sbjct: 254 RPYAPGERCVKVFQGHQHNFEKNLLRCA-WSPGSDKITSGSADRHVYIWDVNTRR 307
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 50/224 (22%), Positives = 97/224 (43%)
Query: 26 ASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHR 84
A L SGV + + + + + + H+G + FH L +S G D +I +W Y+
Sbjct: 32 ALLESGVRRTSNLQAPIM--QLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCE 89
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
+ + GH + F + I + S D+T+ W+ + GH ++V
Sbjct: 90 NVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGS 149
Query: 145 PK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM---NTD---LFGGVDAVVK 197
+ + L+ S S D+T+++WD A +K + +++ + +T + GG+D VK
Sbjct: 150 RRGQQLLCSGSDDRTIKIWD--ARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVK 207
Query: 198 ----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
+ L GH + + P I++ A D +++W
Sbjct: 208 IWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVW 251
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/214 (23%), Positives = 89/214 (41%)
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--------------GALRKKTVS 173
I L GH + A FHP+ +L++S+ D+ + +W + GA+ + +
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 174 P-ADDILRLSQMNTDLFGGVDAVVKYV-LEGHDRGVNWA-AFHPTLPLIVSGADDRQVKL 230
P I S T F + + +GH VN L+ SG+DDR +K+
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W + A TL V+ V F + ++S D +++WD+ K+ + R
Sbjct: 168 WDARKKHA--AHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERERP 323
D ++ PE + +L D+ + V+ + P
Sbjct: 225 DTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAP 258
Score = 136 (52.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 35/140 (25%), Positives = 62/140 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH----RCLFT 88
+++WD R ++ H + G+ ++ D ++VW+ + + RC+
Sbjct: 206 VKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKV 265
Query: 89 LLGHLDYIRTVQFHHEY-PW---IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
GH + P I S S D+ + IW+ +R + L GHN V F
Sbjct: 266 FQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFS 325
Query: 145 PKEDLVVSASLDQTVRVWDI 164
PKE L++S S D+T+ + +I
Sbjct: 326 PKEPLILSGSSDKTLYLGEI 345
Score = 101 (40.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 32/118 (27%), Positives = 59/118 (50%)
Query: 171 TVSPADDILRLSQMNTDL-------FGGVDAVVKYVLEGH----DRGVNWAAFHPTLPLI 219
++SP D + + M+ L + + VK V +GH ++ + A+ P I
Sbjct: 231 SLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVK-VFQGHQHNFEKNLLRCAWSPGSDKI 289
Query: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
SG+ DR V +W +N + + L GH +V+ V F K+ +I+S S DK++ + ++
Sbjct: 290 TSGSADRHVYIWDVNTRRI--LYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
Score = 77 (32.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
+ Y L GH+ VN F P PLI+SG+ D+ + L ++E
Sbjct: 308 ILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEIDE 347
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 224 (83.9 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 61/187 (32%), Positives = 90/187 (48%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--G 165
IVS D TI+IW+ C+ L GH V+C + K +++S S D TVRVWD+ G
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VIISGSSDSTVRVWDVNTG 280
Query: 166 ALRKKTVSPADDILRL----SQMNT----------DLFGGVDAVVKYVLEGHDRGVNWAA 211
+ + + +L L M T D+ + ++ VL GH VN
Sbjct: 281 EMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVD 340
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 341 FDEKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDN 393
Query: 271 SIRVWDV 277
SIR+WD+
Sbjct: 394 SIRLWDI 400
Score = 187 (70.9 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 78/301 (25%), Positives = 132/301 (43%)
Query: 1 MLTKFETKSNRVKG---LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGV 57
ML + +S KG L + + I++ L I++WD + H G V +
Sbjct: 199 MLRRINCRSENSKGVYCLQYDDGK--IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCL 256
Query: 58 HFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTI 117
+ + +SG D ++VW+ + TL+ H + + ++F++ +V+ S D++I
Sbjct: 257 QY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGM--MVTCSKDRSI 312
Query: 118 RIWNWQSRTCIS---VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR-KKTVS 173
+W+ S + I+ VL GH V F K +VSAS D+T++VW +T++
Sbjct: 313 AVWDMTSPSEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWSTSTCEFVRTLN 370
Query: 174 PADDILRLSQMNTDLF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVS 221
+ Q L G D ++ VLEGH+ V F IVS
Sbjct: 371 GHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR--IVS 428
Query: 222 GADDRQVKLW----RMNETKAWEVDTLRGHMNNVSCVMFHAKQDI--IVSNSEDKSIRVW 275
GA D ++K+W ++ A L + + V F + D IVS+S D +I +W
Sbjct: 429 GAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRV-FRLQFDEFQIVSSSHDDTILIW 487
Query: 276 D 276
D
Sbjct: 488 D 488
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 226 (84.6 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 48/159 (30%), Positives = 83/159 (52%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
+ ++++GLSF + + +I++WD+ T ++ H V+ V +H + L V
Sbjct: 208 EQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIV 267
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
SGG D IK+W+ K + + TL GH + V+++ WIVSAS DQ +++++ ++
Sbjct: 268 SGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKE 327
Query: 128 ISVLTGHNHYVMCASFHP-KEDLVVSASLDQTVRVWDIG 165
+ GH V + HP EDL VS D + W +G
Sbjct: 328 MQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVG 366
Score = 203 (76.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 78/346 (22%), Positives = 141/346 (40%)
Query: 53 PVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSAS 112
P+ V + V+G + +WN L H +R++ + H W+VS
Sbjct: 127 PINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 113 DDQTIRIWNWQSRTCISVLTGHNHY-VMCASFHPKEDLVVSASLDQTVRVWDIGALRK-- 169
D I+ W + + + H + SF P + + S + D+ +++WD +
Sbjct: 187 DSGNIKYWQ-PNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDN 245
Query: 170 KTVSPADDILRLS---QMNTDLFGGVDAVVKY----------VLEGHDRGVNWAAFHPTL 216
+ V D+ +S Q + + GG D +K L GH V+ ++
Sbjct: 246 QLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNG 305
Query: 217 PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA-KQDIIVSNSEDKSIRVW 275
IVS + D+ +K++ + K E+ T +GH V+ + H +D+ VS +D I W
Sbjct: 306 NWIVSASSDQLLKVFDIRTMK--EMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYW 363
Query: 276 DVTKRTGVQTFRREHDR-FWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFY 334
V HD W L+ HP ++LA+G + F R RPA +
Sbjct: 364 IVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKF-WSRNRPADTMKDKYNNP 422
Query: 335 AKDRFLRYYEFSTQKDTQV-IP-IRRPGSTSLNQSPRTLSYSPTEN 378
+ + E + +++ + +P + PG S SP+ S + +N
Sbjct: 423 NASKDIENEEDADDQESDLSLPGLSLPGLGSYKPSPQLSSQNILQN 468
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 226 (84.6 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
++ L +K I+A SG I++WD ++ H + + FH SG
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F H +R ++F + W+ SA+DD T+++W+ + +
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 132 TGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
TGH V FHP E L+ S S T+R WD+
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 66/244 (27%), Positives = 107/244 (43%)
Query: 50 HDGPVRGVHFHKSQP-LFVSGGDDYKIKVWNY-KMHRCLFTLLGHLDYIRTVQFHHEYPW 107
H V + KS L +GGDD ++ VW+ ++ L T GH I ++Q +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDLLT--GHTTPIESLQISAKEEL 76
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--- 164
IV+ S +IR+W+ ++ + L GH + FHP V S SLD +++WD+
Sbjct: 77 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 136
Query: 165 GALRK-KTVSPADDILRLSQMNTDLFGGVD-----------AVVKYVLEGHDRGVNWAAF 212
G + K K+ + A LR S L D V + GH VN F
Sbjct: 137 GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF 196
Query: 213 HPTLP-LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
HP++ L+ SG+ ++ W + K V + V C++F+ + +D S
Sbjct: 197 HPSIEYLLASGSSSMTIRFWDLE--KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-S 253
Query: 272 IRVW 275
+RV+
Sbjct: 254 LRVY 257
Score = 182 (69.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 45 DRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHE 104
D H P+ + + L V+G I+VW+ + + L TLLGH I ++ FH
Sbjct: 56 DLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY 115
Query: 105 YPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
++ S S D I++W+ + + CI H V C F P + SA+ D TV++WD+
Sbjct: 116 GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL 175
Query: 165 GA 166
A
Sbjct: 176 TA 177
Score = 173 (66.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+ + DD + +W+ ++ +LTGH + KE+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNVWS-VAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 94
Query: 168 R--KKTVSPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAF 212
+ + + +I L F G +D +K + + H + V F
Sbjct: 95 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRF 154
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQD-IIVSNSEDKS 271
P + S ADD VKLW + K T GH V+ V FH + ++ S S +
Sbjct: 155 SPDGKWLASAADDHTVKLWDLTAGKVMFEFT--GHYGPVNVVEFHPSIEYLLASGSSSMT 212
Query: 272 IRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
IR WD+ K V E + +P+ L G + V+ E ER
Sbjct: 213 IRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPER 263
Score = 141 (54.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/129 (23%), Positives = 59/129 (45%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS- 62
K+++ + V+ L F W+ ++ ++LWD G ++ F H GPV V FH S
Sbjct: 141 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSI 200
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
+ L SG I+ W+ + + + +R + F+ + + D ++R++ W
Sbjct: 201 EYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGW 259
Query: 123 QSRTCISVL 131
+ C V+
Sbjct: 260 EPERCFDVV 268
Score = 122 (48.0 bits), Expect = 0.00090, P = 0.00089
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G DD +V +W + + + D L GH + + AK+++IV+ S+ SIRVWD+
Sbjct: 35 LLATGGDDCRVNVWSVAQLRH---DLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 91
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLERE 321
++T L HP + +A+G D+ + ++ + R+
Sbjct: 92 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 136
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 224 (83.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+S G ++LW + T + + H+ PV F FVS
Sbjct: 303 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 362
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH ++ + S D+T+R+W+ + C+
Sbjct: 363 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 422
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 423 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 459
Score = 196 (74.1 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 61/224 (27%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S+S+D T+R+W+ Q+ TC+
Sbjct: 281 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 340
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPAD-DILRLS-QMN 185
GHN+ V F P VS D+ R+W LR AD + R N
Sbjct: 341 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 400
Query: 186 TDLFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ F P + +GA D +V LW +
Sbjct: 401 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 460
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + V + F +I+ S S D ++R+WD K
Sbjct: 461 --GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
Score = 186 (70.5 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 55/206 (26%), Positives = 86/206 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 302 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 361
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + V + S D+TVR+WD+
Sbjct: 362 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 421
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + T SP L + L+ ++ L+GH V F
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 481
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE 240
++ SG+ D V+LW + KA+E
Sbjct: 482 DGEILASGSMDNTVRLW--DAVKAFE 505
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 57/228 (25%), Positives = 95/228 (41%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V ASF P + ++S+S
Sbjct: 264 LRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE 323
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 324 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 383
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH VN FHP + +G+ DR V+LW + + T GH + + F
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLTFSPNG 441
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D L + +LA+G
Sbjct: 442 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 489
Score = 145 (56.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 59/242 (24%), Positives = 96/242 (39%)
Query: 85 CLFTLLG-HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
C +T L + + V + I D T+R+W+ + SV + S
Sbjct: 221 CFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAAD-----LSL 275
Query: 144 HPKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAV 195
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 276 IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 335
Query: 196 VKYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 336 TCLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVNC 392
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGM 313
FH + + + S D+++R+WDV V+ F L P LA G G
Sbjct: 393 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 452
Query: 314 IV 315
++
Sbjct: 453 VL 454
Score = 139 (54.0 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 365 HDRVARLWATDHYQPLRI--FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 422
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH V F
Sbjct: 423 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 482
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 483 GEILASGSMDNTVRLWD 499
Score = 131 (51.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ ++LWD G + F H GP+ + F + +G D ++
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 454
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D + +++F + + S S D T+R+W+
Sbjct: 455 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 43 (20.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T V + +S D E +A
Sbjct: 434 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 487
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 223 (83.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
++ L +K I+A SG I++WD ++ H + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+W+ + C+F H +R ++F + W+ SA+DD T+++W+ + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
TGH V FHP E + + + +T+R WD+
Sbjct: 186 TGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDL 218
Score = 220 (82.5 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 67/243 (27%), Positives = 105/243 (43%)
Query: 50 HDGPVRGVHFHKSQP-LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H V + KS L +GGDD ++ VW+ C+ +L GH I ++Q + I
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI---G 165
V+ S +IR+W+ ++ + L GH + FHP V S SLD +++WD+ G
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 166 ALRK-KTVSPADDILRLSQMNTDLFGGVD-----------AVVKYVLEGHDRGVNWAAFH 213
+ K K+ + A LR S L D V + GH VN FH
Sbjct: 139 CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH 198
Query: 214 PT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
P+ PL S R ++ W + K V + V C++F+ + +D S+
Sbjct: 199 PSEYPLAGSPVH-RTIRFWDLE--KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SL 254
Query: 273 RVW 275
RV+
Sbjct: 255 RVY 257
Score = 190 (71.9 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 61/232 (26%), Positives = 96/232 (41%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA- 166
+ + DD + +W+ C+ LTGH + KE+L+V+ S ++RVWD+ A
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 95
Query: 167 --LR-----KKTVSPAD-----DILRLSQMNTDL-FGGV---DAVVKYVLEGHDRGVNWA 210
LR K + D + ++TD+ V + KY + H + V
Sbjct: 96 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKY--KSHTQAVRCL 153
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F P + S ADD VKLW + K T GH V+ V FH + + + +
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT--GHYGPVNVVEFHPSEYPLAGSPVHR 211
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERER 322
+IR WD+ K V E + +P+ L G + V+ E ER
Sbjct: 212 TIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPER 263
Score = 187 (70.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ +W + H P+ + + L V+G I+VW+ + + L TLLGH
Sbjct: 45 VNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGH 104
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
I ++ FH ++ S S D I++W+ + + CI H V C F P + S
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 153 ASLDQTVRVWDIGA 166
A+ D TV++WD+ A
Sbjct: 165 AADDHTVKLWDLTA 178
Score = 162 (62.1 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 40/156 (25%), Positives = 70/156 (44%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
K+N + L FH ++ + I+LWD R I ++ H VR + F
Sbjct: 105 KAN-ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLA 163
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
S DD+ +K+W+ + +F GH + V+FH EYP + + +TIR W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYP-LAGSPVHRTIRFWDLEKFH 222
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+S + V C F+P + + ++RV+
Sbjct: 223 VVSCIEEEATPVRCILFNP-DGCCLYGGFQDSLRVY 257
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 30/130 (23%), Positives = 62/130 (47%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K+++ + V+ L F W+ ++ ++LWD G ++ F H GPV V FH S+
Sbjct: 142 KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSE 201
Query: 64 -PLFVSGGDDYK-IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
PL +G ++ I+ W+ + + + +R + F+ + + D ++R++
Sbjct: 202 YPL--AGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYG 258
Query: 122 WQSRTCISVL 131
W+ C V+
Sbjct: 259 WEPERCFDVV 268
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 30/105 (28%), Positives = 56/105 (53%)
Query: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
L+ +G DD +V +W +N+ V +L GH + + AK+++IV+ S+ SIRVWD+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNC--VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 278 TKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKLERE 321
++T L HP + +A+G D+ + ++ + R+
Sbjct: 93 EAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 224 (83.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+S G ++LW + T + + H+ PV F FVS
Sbjct: 541 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 600
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH ++ + S D+T+R+W+ + C+
Sbjct: 601 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 660
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 661 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 697
Score = 195 (73.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 61/224 (27%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S+S+D T+R+W+ Q+ TC+
Sbjct: 519 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 578
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPAD-DILRLS-QMN 185
GHN+ V F P VS D+ R+W LR AD + R N
Sbjct: 579 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 638
Query: 186 TDLFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ F P + +GA D +V LW +
Sbjct: 639 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 698
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + V + F +I+ S S D ++R+WD K
Sbjct: 699 --GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 740
Score = 185 (70.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 55/206 (26%), Positives = 86/206 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 540 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 599
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + V + S D+TVR+WD+
Sbjct: 600 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 659
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + T SP L + L+ ++ L+GH V F
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 719
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE 240
++ SG+ D V+LW + KA+E
Sbjct: 720 DGEILASGSMDNTVRLW--DAIKAFE 743
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 57/228 (25%), Positives = 95/228 (41%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V ASF P + ++S+S
Sbjct: 502 LRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE 561
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 562 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 621
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH VN FHP + +G+ DR V+LW + + T GH + + F
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLTFSPNG 679
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D L + +LA+G
Sbjct: 680 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 727
Score = 152 (58.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 59/241 (24%), Positives = 95/241 (39%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
C +T L + V + I D T+R+W+ + SV + S
Sbjct: 460 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASD-----LSLI 514
Query: 145 PKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAVV 196
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 515 DKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 574
Query: 197 KYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 575 CLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVNCT 631
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + + + S D+++R+WDV V+ F L P LA G G +
Sbjct: 632 RFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 691
Query: 315 V 315
+
Sbjct: 692 L 692
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 603 HDRVARLWATDHYQPLRI--FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 660
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH V F
Sbjct: 661 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 720
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 721 GEILASGSMDNTVRLWD 737
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ ++LWD G + F H GP+ + F + +G D ++
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 692
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D + +++F + + S S D T+R+W+
Sbjct: 693 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 43 (20.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T V + +S D E +A
Sbjct: 672 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 725
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 224 (83.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+S G ++LW + T + + H+ PV F FVS
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH ++ + S D+T+R+W+ + C+
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 61/224 (27%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S+S+D T+R+W+ Q+ TC+
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPAD-DILRLS-QMN 185
GHN+ V F P VS D+ R+W LR AD + R N
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 186 TDLFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ F P + +GA D +V LW +
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + V + F +I+ S S D ++R+WD K
Sbjct: 701 --GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 742
Score = 188 (71.2 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 57/210 (27%), Positives = 89/210 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 601
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + V + S D+TVR+WD+
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 661
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + T SP L + L+ ++ L+GH V F
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE-VDT 243
++ SG+ D V+LW + KA+E V+T
Sbjct: 722 DGEILASGSMDNTVRLW--DAVKAFEDVET 749
Score = 153 (58.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 57/228 (25%), Positives = 95/228 (41%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V ASF P + ++S+S
Sbjct: 504 LRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE 563
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 564 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH VN FHP + +G+ DR V+LW + + T GH + + F
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLTFSPNG 681
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D L + +LA+G
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 729
Score = 151 (58.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 59/241 (24%), Positives = 95/241 (39%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
C +T L + V + I D T+R+W+ + SV + S
Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAAD-----LSLI 516
Query: 145 PKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAVV 196
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 517 DKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 576
Query: 197 KYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 577 CLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVNCT 633
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + + + S D+++R+WDV V+ F L P LA G G +
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 693
Query: 315 V 315
+
Sbjct: 694 L 694
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 605 HDRVARLWATDHYQPLRI--FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH V F
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 723 GEILASGSMDNTVRLWD 739
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ ++LWD G + F H GP+ + F + +G D ++
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D + +++F + + S S D T+R+W+
Sbjct: 695 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 43 (20.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T V + +S D E +A
Sbjct: 674 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 727
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 224 (83.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+S G ++LW + T + + H+ PV F FVS
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH ++ + S D+T+R+W+ + C+
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
Score = 195 (73.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 61/224 (27%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S+S+D T+R+W+ Q+ TC+
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPAD-DILRLS-QMN 185
GHN+ V F P VS D+ R+W LR AD + R N
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 186 TDLFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ F P + +GA D +V LW +
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + V + F +I+ S S D ++R+WD K
Sbjct: 701 --GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIK 742
Score = 185 (70.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 55/206 (26%), Positives = 86/206 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 601
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + V + S D+TVR+WD+
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 661
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + T SP L + L+ ++ L+GH V F
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE 240
++ SG+ D V+LW + KA+E
Sbjct: 722 DGEILASGSMDNTVRLW--DAIKAFE 745
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 57/228 (25%), Positives = 95/228 (41%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V ASF P + ++S+S
Sbjct: 504 LRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE 563
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 564 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH VN FHP + +G+ DR V+LW + + T GH + + F
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLTFSPNG 681
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D L + +LA+G
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 729
Score = 152 (58.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 59/241 (24%), Positives = 95/241 (39%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
C +T L + V + I D T+R+W+ + SV + S
Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASD-----LSLI 516
Query: 145 PKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAVV 196
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 517 DKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 576
Query: 197 KYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 577 CLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVNCT 633
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + + + S D+++R+WDV V+ F L P LA G G +
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 693
Query: 315 V 315
+
Sbjct: 694 L 694
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 605 HDRVARLWATDHYQPLRI--FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH V F
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 723 GEILASGSMDNTVRLWD 739
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ ++LWD G + F H GP+ + F + +G D ++
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D + +++F + + S S D T+R+W+
Sbjct: 695 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 43 (20.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T V + +S D E +A
Sbjct: 674 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 727
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 224 (83.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+S G ++LW + T + + H+ PV F FVS
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH ++ + S D+T+R+W+ + C+
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 700
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 61/224 (27%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S+S+D T+R+W+ Q+ TC+
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPAD-DILRLS-QMN 185
GHN+ V F P VS D+ R+W LR AD + R N
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641
Query: 186 TDLFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ F P + +GA D +V LW +
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + V + F +I+ S S D ++R+WD K
Sbjct: 702 --GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
Score = 186 (70.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/206 (26%), Positives = 86/206 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 602
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + V + S D+TVR+WD+
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNC 662
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + T SP L + L+ ++ L+GH V F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE 240
++ SG+ D V+LW + KA+E
Sbjct: 723 DGEILASGSMDNTVRLW--DAVKAFE 746
Score = 153 (58.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 57/228 (25%), Positives = 95/228 (41%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V ASF P + ++S+S
Sbjct: 505 LRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE 564
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 565 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH VN FHP + +G+ DR V+LW + + T GH + + F
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLTFSPNG 682
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D L + +LA+G
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 730
Score = 151 (58.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 59/241 (24%), Positives = 95/241 (39%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
C +T L + V + I D T+R+W+ + SV + S
Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAAD-----LSLI 517
Query: 145 PKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAVV 196
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 518 DKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 577
Query: 197 KYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 578 CLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVNCT 634
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + + + S D+++R+WDV V+ F L P LA G G +
Sbjct: 635 RFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 694
Query: 315 V 315
+
Sbjct: 695 L 695
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 606 HDRVARLWATDHYQPLRI--FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH V F
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 724 GEILASGSMDNTVRLWD 740
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ ++LWD G + F H GP+ + F + +G D ++
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D + +++F + + S S D T+R+W+
Sbjct: 696 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 43 (20.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T V + +S D E +A
Sbjct: 675 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 728
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 79/293 (26%), Positives = 138/293 (47%)
Query: 15 LSFHSKRPWILASLHSG----VIQLWDYRMGTLIDRFDEHDGPVRGVHF--HKSQPLFVS 68
++FH P + SL SG I++WD+ +G + H V G+ + K L S
Sbjct: 120 VAFH---P-VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLAS 175
Query: 69 GGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNWQSRT 126
D IK+W+ K + + TL GH + +V+F ++SAS D T+RIW+ +
Sbjct: 176 CSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGF 235
Query: 127 CISVL-TGHNHYV--MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQ 183
C+ V+ + ++ + SF K +VS DQ + VW++ + K + +
Sbjct: 236 CVKVIKSATESWIRDVSPSFDGK--WLVSGGRDQAITVWEVSSAEPKAALLGHE----NF 289
Query: 184 MNTDLFGGVDAVVKYV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
+ +F A +++ L G + + + + +GA D+ +KLW E + +
Sbjct: 290 IECCVFAP-PASYEHLATLAGLKKPPPATS---SCEFVATGARDKTIKLW---EARGRLI 342
Query: 242 DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG-VQTFRREHDRF 293
TL GH N V ++FH + S S+DK+IR WD+++ V+T H+ F
Sbjct: 343 KTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHF 395
Score = 185 (70.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 66/252 (26%), Positives = 110/252 (43%)
Query: 12 VKGLSFHSKRP-WILASLHSGV-IQLWDYRMGTL-IDRFDEHDGPVRGVHFHKSQPL-FV 67
V GL + ++ +LAS S + I+LWD I HD V V F S +
Sbjct: 159 VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLI 218
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
S D +++W+ C+ + + +IR V + W+VS DQ I +W S
Sbjct: 219 SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAE 278
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK--TVSPADDILRLSQM 184
+ L GH +++ C F P AS + + L+K S + + ++
Sbjct: 279 PKAALLGHENFIECCVFAPP------ASYEHLAT---LAGLKKPPPATSSCEFVATGARD 329
Query: 185 NT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
T L+ ++K L GHD V FHP + S +DD+ ++ W +++ + V T
Sbjct: 330 KTIKLWEARGRLIK-TLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ-EGRLVKT 387
Query: 244 LRG-HMNNVSCV 254
+ G H + VSC+
Sbjct: 388 ISGAHEHFVSCI 399
Score = 168 (64.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 72/295 (24%), Positives = 129/295 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEY--PW 107
H V V FH SG +D IK+W++++ TL GH+ + + + +
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 108 IVSASDDQTIRIWN-WQSRTCISVLTGHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI- 164
+ S S D TI++W+ + I L+GH+H V F D ++SAS D T+R+WD+
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVS 232
Query: 165 -GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEG-HDRGVN-W--AAFHPTLPLI 219
G K S + +R D+ D K+++ G D+ + W ++ P L+
Sbjct: 233 TGFCVKVIKSATESWIR------DVSPSFDG--KWLVSGGRDQAITVWEVSSAEPKAALL 284
Query: 220 VSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
+ ++ ++E + TL G + + + + + DK+I++W+
Sbjct: 285 ---GHENFIECCVFAPPASYEHLATLAGLKKPPPAT---SSCEFVATGARDKTIKLWEAR 338
Query: 279 KRTGVQTFRREHDRFWI--LASHPEMN-LLAAGHDSGMIVFKLERE-RPAFAVSG 329
R ++T HD W+ L HP L + D + + L +E R +SG
Sbjct: 339 GRL-IKTLHG-HDN-WVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 196 VKYVLEGHDRGVNWAAF--HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
++ L+GH RGV+ + L+ S + D +KLW ++ A + TL GH ++VS
Sbjct: 148 IERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYA-NIRTLSGHDHSVSS 206
Query: 254 VMFHAKQDI-IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN---LLAAGH 309
V F D ++S S D ++R+WDV+ V+ + + WI P + L++ G
Sbjct: 207 VRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATES-WIRDVSPSFDGKWLVSGGR 265
Query: 310 DSGMIVFKLERERPAFAVSGDSLF 333
D + V+++ P A+ G F
Sbjct: 266 DQAITVWEVSSAEPKAALLGHENF 289
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 66 FVS-GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW-Q 123
FV+ G D IK+W + R + TL GH +++R + FH ++ S SDD+TIR W+ Q
Sbjct: 322 FVATGARDKTIKLWEAR-GRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 124 SRTCISVLTG-HNHYVMCASFHP 145
+ ++G H H+V C + P
Sbjct: 381 EGRLVKTISGAHEHFVSCIRWAP 403
Score = 121 (47.7 bits), Expect = 0.00065, P = 0.00065
Identities = 35/128 (27%), Positives = 68/128 (53%)
Query: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD-TLRGHMNNVSCVMF 256
+ L H V AFHP + SG++D +K+W + + E++ TL+GH+ VS + +
Sbjct: 108 HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIW---DWELGEIERTLKGHIRGVSGLDY 164
Query: 257 HAKQD--IIVSNSEDKSIRVWDVTKR-TGVQTFR-REHD----RFWILASHPEMNLLAAG 308
++ ++ S S D +I++WD +K ++T +H RF L S+ + +L++A
Sbjct: 165 GGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF--LTSN-DNHLISAS 221
Query: 309 HDSGMIVF 316
D + ++
Sbjct: 222 RDGTLRIW 229
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 79/293 (26%), Positives = 138/293 (47%)
Query: 15 LSFHSKRPWILASLHSG----VIQLWDYRMGTLIDRFDEHDGPVRGVHF--HKSQPLFVS 68
++FH P + SL SG I++WD+ +G + H V G+ + K L S
Sbjct: 120 VAFH---P-VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLAS 175
Query: 69 GGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNWQSRT 126
D IK+W+ K + + TL GH + +V+F ++SAS D T+RIW+ +
Sbjct: 176 CSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGF 235
Query: 127 CISVL-TGHNHYV--MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQ 183
C+ V+ + ++ + SF K +VS DQ + VW++ + K + +
Sbjct: 236 CVKVIKSATESWIRDVSPSFDGK--WLVSGGRDQAITVWEVSSAEPKAALLGHE----NF 289
Query: 184 MNTDLFGGVDAVVKYV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
+ +F A +++ L G + + + + +GA D+ +KLW E + +
Sbjct: 290 IECCVFAP-PASYEHLATLAGLKKPPPATS---SCEFVATGARDKTIKLW---EARGRLI 342
Query: 242 DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTG-VQTFRREHDRF 293
TL GH N V ++FH + S S+DK+IR WD+++ V+T H+ F
Sbjct: 343 KTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHF 395
Score = 185 (70.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 66/252 (26%), Positives = 110/252 (43%)
Query: 12 VKGLSFHSKRP-WILASLHSGV-IQLWDYRMGTL-IDRFDEHDGPVRGVHFHKSQPL-FV 67
V GL + ++ +LAS S + I+LWD I HD V V F S +
Sbjct: 159 VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLI 218
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
S D +++W+ C+ + + +IR V + W+VS DQ I +W S
Sbjct: 219 SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAE 278
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK--TVSPADDILRLSQM 184
+ L GH +++ C F P AS + + L+K S + + ++
Sbjct: 279 PKAALLGHENFIECCVFAPP------ASYEHLAT---LAGLKKPPPATSSCEFVATGARD 329
Query: 185 NT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
T L+ ++K L GHD V FHP + S +DD+ ++ W +++ + V T
Sbjct: 330 KTIKLWEARGRLIK-TLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ-EGRLVKT 387
Query: 244 LRG-HMNNVSCV 254
+ G H + VSC+
Sbjct: 388 ISGAHEHFVSCI 399
Score = 168 (64.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 72/295 (24%), Positives = 129/295 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEY--PW 107
H V V FH SG +D IK+W++++ TL GH+ + + + +
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 108 IVSASDDQTIRIWN-WQSRTCISVLTGHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI- 164
+ S S D TI++W+ + I L+GH+H V F D ++SAS D T+R+WD+
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVS 232
Query: 165 -GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEG-HDRGVN-W--AAFHPTLPLI 219
G K S + +R D+ D K+++ G D+ + W ++ P L+
Sbjct: 233 TGFCVKVIKSATESWIR------DVSPSFDG--KWLVSGGRDQAITVWEVSSAEPKAALL 284
Query: 220 VSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
+ ++ ++E + TL G + + + + + DK+I++W+
Sbjct: 285 ---GHENFIECCVFAPPASYEHLATLAGLKKPPPAT---SSCEFVATGARDKTIKLWEAR 338
Query: 279 KRTGVQTFRREHDRFWI--LASHPEMN-LLAAGHDSGMIVFKLERE-RPAFAVSG 329
R ++T HD W+ L HP L + D + + L +E R +SG
Sbjct: 339 GRL-IKTLHG-HDN-WVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 196 VKYVLEGHDRGVNWAAF--HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
++ L+GH RGV+ + L+ S + D +KLW ++ A + TL GH ++VS
Sbjct: 148 IERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYA-NIRTLSGHDHSVSS 206
Query: 254 VMFHAKQDI-IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN---LLAAGH 309
V F D ++S S D ++R+WDV+ V+ + + WI P + L++ G
Sbjct: 207 VRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATES-WIRDVSPSFDGKWLVSGGR 265
Query: 310 DSGMIVFKLERERPAFAVSGDSLF 333
D + V+++ P A+ G F
Sbjct: 266 DQAITVWEVSSAEPKAALLGHENF 289
Score = 129 (50.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 66 FVS-GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW-Q 123
FV+ G D IK+W + R + TL GH +++R + FH ++ S SDD+TIR W+ Q
Sbjct: 322 FVATGARDKTIKLWEAR-GRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 124 SRTCISVLTG-HNHYVMCASFHP 145
+ ++G H H+V C + P
Sbjct: 381 EGRLVKTISGAHEHFVSCIRWAP 403
Score = 121 (47.7 bits), Expect = 0.00065, P = 0.00065
Identities = 35/128 (27%), Positives = 68/128 (53%)
Query: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD-TLRGHMNNVSCVMF 256
+ L H V AFHP + SG++D +K+W + + E++ TL+GH+ VS + +
Sbjct: 108 HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIW---DWELGEIERTLKGHIRGVSGLDY 164
Query: 257 HAKQD--IIVSNSEDKSIRVWDVTKR-TGVQTFR-REHD----RFWILASHPEMNLLAAG 308
++ ++ S S D +I++WD +K ++T +H RF L S+ + +L++A
Sbjct: 165 GGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF--LTSN-DNHLISAS 221
Query: 309 HDSGMIVF 316
D + ++
Sbjct: 222 RDGTLRIW 229
>UNIPROTKB|Q5ZL33 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9031 "Gallus gallus" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0005102 GO:GO:0005681 GO:GO:0000122 GO:GO:0030512 HSSP:P63005
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M EMBL:AJ719901
IPI:IPI00577361 RefSeq:NP_001006247.2 UniGene:Gga.44357
ProteinModelPortal:Q5ZL33 STRING:Q5ZL33 PRIDE:Q5ZL33
Ensembl:ENSGALT00000021374 GeneID:418175 KEGG:gga:418175
InParanoid:Q5ZL33 NextBio:20821378 Uniprot:Q5ZL33
Length = 350
Score = 215 (80.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 70/283 (24%), Positives = 126/283 (44%)
Query: 12 VKGLSFHSKRPW---ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
V L+F P+ ++++ G L G I F H G V G +K +
Sbjct: 17 VVDLAFSGVTPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAAT 76
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
D+ KVW+ L TL H +++V F + ++++ D+ +RI++
Sbjct: 77 AAADFTAKVWDAVSGDELITL-AHKHIVKSVDFTQDSNYLLTGGQDKLLRIYDLSKPEAE 135
Query: 129 -SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD------IGALR-KKTVS-----PA 175
V++GH + A + + ++SA D+TVR+WD + AL +VS P
Sbjct: 136 PDVVSGHTSGIKKALWSSDDKQILSAD-DKTVRLWDRSTMTEVKALNVAMSVSSMEYVPE 194
Query: 176 DDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
IL ++ T F + + + +N A+ HP +V+G +D KL++ +
Sbjct: 195 GQILVITYGKTIAFHSAETLEQIKSFEAPATINSASLHPEKECLVAGGED--FKLYKYDY 252
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
E+++ +GH + CV F ++ S SED ++R+W T
Sbjct: 253 NTGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQTT 295
>UNIPROTKB|Q9NRL3 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A
binding" evidence=IDA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IDA] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005516 GO:GO:0051721
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 EMBL:AF212940 EMBL:BC004910 EMBL:BC034604
IPI:IPI00003016 RefSeq:NP_001034966.1 RefSeq:NP_037535.2
UniGene:Hs.631590 ProteinModelPortal:Q9NRL3 SMR:Q9NRL3
IntAct:Q9NRL3 MINT:MINT-1371553 STRING:Q9NRL3 PhosphoSite:Q9NRL3
DMDM:152031693 PaxDb:Q9NRL3 PRIDE:Q9NRL3 Ensembl:ENST00000263280
GeneID:29888 KEGG:hsa:29888 UCSC:uc002pfl.3 CTD:29888
GeneCards:GC19M047222 H-InvDB:HIX0096898 HGNC:HGNC:15721
HPA:HPA043527 MIM:614767 neXtProt:NX_Q9NRL3 PharmGKB:PA134863218
PhylomeDB:Q9NRL3 ChiTaRS:STRN4 GenomeRNAi:29888 NextBio:52431
PMAP-CutDB:Q9NRL3 ArrayExpress:Q9NRL3 Bgee:Q9NRL3 CleanEx:HS_STRN4
Genevestigator:Q9NRL3 GermOnline:ENSG00000090372 Uniprot:Q9NRL3
Length = 753
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 2 LTKFETKSNR--VKGLSFHSKRP-WILASLHSGVIQLWDYRMGTLIDRFDEH--DGP--V 54
L F T S ++F S P I+AS SG L+D +G+ + + GP +
Sbjct: 581 LCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQI 640
Query: 55 RGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDD 114
V H +QPL ++ DD I+ + + + + +++ HLD + + +++S S D
Sbjct: 641 NQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHD 700
Query: 115 QTIRIWNWQSRTCISVLTGHN--HY--VMCASFHPKEDLVVSASLDQTVRVW 162
++R+W+ ++TC+ +T H H + + HP + L+ SA D +V+
Sbjct: 701 CSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 752
Score = 145 (56.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/173 (28%), Positives = 73/173 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--- 127
D +K K WN K FTL H D IR++ FHH +++AS+D T+++WN Q
Sbjct: 422 DAFK-KTWNPK-----FTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKK 475
Query: 128 --------ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
I H V+ + + S D + W I P
Sbjct: 476 NAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKI---------P----- 521
Query: 180 RLSQMNTDLFGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
++ D + G D +V+ +VLEGH V AF PT + S + D V++W
Sbjct: 522 ---DLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIW 571
Score = 131 (51.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
+N HP PL ++ DDR ++ ++ V ++ H++ V+C+ ++S
Sbjct: 640 INQVVSHPNQPLTITAHDDRGIRF--LDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSG 697
Query: 267 SEDKSIRVWDVTKRTGVQTF---RREHDR-FWILASHPEMNLLA-AGHDSGMIVF 316
S D S+R+W + +T VQ R++H+ +A HP L+A AG D+ VF
Sbjct: 698 SHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 752
Score = 73 (30.8 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
VL GH V +F P + S S D TVR+WD
Sbjct: 539 VLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 572
Score = 71 (30.1 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 23/88 (26%), Positives = 36/88 (40%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTL-----------IDRFDEH 50
KF +S+ ++ L+FH + +L + G ++LW+ + I F H
Sbjct: 431 KFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAH 490
Query: 51 DGPVRGVHFHKSQPLFVSGGDDYKIKVW 78
GPV V + SGG D I W
Sbjct: 491 RGPVLAVAMGSNSEYCYSGGADACIHSW 518
Score = 70 (29.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 35/126 (27%), Positives = 46/126 (36%)
Query: 44 IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-----------YKMHRCLFTLLGH 92
I F H GPV V + SGG D I W Y L GH
Sbjct: 484 IHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGH 543
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT--CISVL-TGHNHYVMCA-SFHPKED 148
D + + F + S S D T+RIW+ S + C+ T H V + +F E
Sbjct: 544 GDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEP 603
Query: 149 LVVSAS 154
+ AS
Sbjct: 604 AHIVAS 609
Score = 63 (27.2 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN 79
+DG +R + FH SQ ++ +D +K+WN
Sbjct: 438 YDG-IRSLAFHHSQSALLTASEDGTLKLWN 466
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 164 (62.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 65 LFVSGGDDYKIKVWNYKMHR---CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
LF +G D I++W+ H+ + ++ H D++ + ++SAS D T+++WN
Sbjct: 45 LFTAGRDSI-IRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWN 103
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVS 173
C+S L H YV ++ ++LV SA LD+ + +WD+ L T S
Sbjct: 104 AHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTAS 155
Score = 123 (48.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 52/234 (22%), Positives = 102/234 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++++ +++W+ G + H V+ + + K + L S G D +I +W+
Sbjct: 90 LISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTL 149
Query: 84 RCLF---------TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV--LT 132
L +L G+ D I ++ + I+S S ++ +R+W+ RTC + L
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWD--PRTCAKLMKLK 207
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADD---ILRLSQMNTDL 188
GH V + +S S D T+R+W +G R T D+ L++++ T +
Sbjct: 208 GHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHI 267
Query: 189 F-GGVDAVVKYV-LEGHD-RGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
+ GG D + L D R + P L + + + D +W ++ TK++
Sbjct: 268 YSGGRDRKIYCTDLRNPDMRVLICEEKAPVLRMELDRSADPPQSIW-VSTTKSF 320
Score = 110 (43.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 30/126 (23%), Positives = 62/126 (49%)
Query: 186 TDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
T L + V L G+ + A + T +I+SG+ ++ +++W T A ++ L+
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPR-TCA-KLMKLK 207
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEM-NL 304
GH +NV ++ + +S S D +IR+W + ++ + T+R + W L + ++
Sbjct: 208 GHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHI 267
Query: 305 LAAGHD 310
+ G D
Sbjct: 268 YSGGRD 273
Score = 50 (22.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 244 LRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
++G + V C + + K+ I+ ++ + S+ WDV K
Sbjct: 357 IKGGTSIVQCHILNDKRHILTKDTNN-SVAFWDVLK 391
>UNIPROTKB|F8VYA6 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0043197
"dendritic spine" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
EMBL:AC008622 EMBL:AC008635 RefSeq:NP_001034966.1 UniGene:Hs.631590
GeneID:29888 KEGG:hsa:29888 CTD:29888 HGNC:HGNC:15721 ChiTaRS:STRN4
GenomeRNAi:29888 NextBio:52431 OMA:RPHEGSF IPI:IPI00741970
ProteinModelPortal:F8VYA6 SMR:F8VYA6 PRIDE:F8VYA6
Ensembl:ENST00000391910 UCSC:uc002pfm.3 ArrayExpress:F8VYA6
Bgee:F8VYA6 Uniprot:F8VYA6
Length = 760
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 2 LTKFETKSNR--VKGLSFHSKRP-WILASLHSGVIQLWDYRMGTLIDRFDEH--DGP--V 54
L F T S ++F S P I+AS SG L+D +G+ + + GP +
Sbjct: 588 LCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQI 647
Query: 55 RGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDD 114
V H +QPL ++ DD I+ + + + + +++ HLD + + +++S S D
Sbjct: 648 NQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSHD 707
Query: 115 QTIRIWNWQSRTCISVLTGHN--HY--VMCASFHPKEDLVVSASLDQTVRVW 162
++R+W+ ++TC+ +T H H + + HP + L+ SA D +V+
Sbjct: 708 CSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 759
Score = 145 (56.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/173 (28%), Positives = 73/173 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--- 127
D +K K WN K FTL H D IR++ FHH +++AS+D T+++WN Q
Sbjct: 429 DAFK-KTWNPK-----FTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKK 482
Query: 128 --------ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
I H V+ + + S D + W I P
Sbjct: 483 NAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKI---------P----- 528
Query: 180 RLSQMNTDLFGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
++ D + G D +V+ +VLEGH V AF PT + S + D V++W
Sbjct: 529 ---DLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADGTVRIW 578
Score = 131 (51.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
+N HP PL ++ DDR ++ ++ V ++ H++ V+C+ ++S
Sbjct: 647 INQVVSHPNQPLTITAHDDRGIRF--LDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSG 704
Query: 267 SEDKSIRVWDVTKRTGVQTF---RREHDR-FWILASHPEMNLLA-AGHDSGMIVF 316
S D S+R+W + +T VQ R++H+ +A HP L+A AG D+ VF
Sbjct: 705 SHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVF 759
Score = 73 (30.8 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
VL GH V +F P + S S D TVR+WD
Sbjct: 546 VLEGHGDAVWGLAFSPTSQRLASCSADGTVRIWD 579
Score = 71 (30.1 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 23/88 (26%), Positives = 36/88 (40%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTL-----------IDRFDEH 50
KF +S+ ++ L+FH + +L + G ++LW+ + I F H
Sbjct: 438 KFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAH 497
Query: 51 DGPVRGVHFHKSQPLFVSGGDDYKIKVW 78
GPV V + SGG D I W
Sbjct: 498 RGPVLAVAMGSNSEYCYSGGADACIHSW 525
Score = 70 (29.7 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 35/126 (27%), Positives = 46/126 (36%)
Query: 44 IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-----------YKMHRCLFTLLGH 92
I F H GPV V + SGG D I W Y L GH
Sbjct: 491 IHAFRAHRGPVLAVAMGSNSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGH 550
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT--CISVL-TGHNHYVMCA-SFHPKED 148
D + + F + S S D T+RIW+ S + C+ T H V + +F E
Sbjct: 551 GDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEP 610
Query: 149 LVVSAS 154
+ AS
Sbjct: 611 AHIVAS 616
Score = 63 (27.2 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN 79
+DG +R + FH SQ ++ +D +K+WN
Sbjct: 445 YDG-IRSLAFHHSQSALLTASEDGTLKLWN 473
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 220 (82.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 61/188 (32%), Positives = 92/188 (48%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTV-RVWDI-- 164
I+S D +I+IW+ S C+ VLTGH V+C + E ++V+ S D TV RVWD+
Sbjct: 233 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVSRVWDVNT 290
Query: 165 GALRKKTVSPADDILRLSQMNT--------------DLFGGVDAVVKYVLEGHDRGVNWA 210
G + + + +L L N D+ D ++ VL GH VN
Sbjct: 291 GEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 350
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
F IVS + DR +K+W T E V TL GH ++C+ + + ++VS S D
Sbjct: 351 DFDDKY--IVSASGDRTIKVW---STSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSD 403
Query: 270 KSIRVWDV 277
+IR+WD+
Sbjct: 404 NTIRLWDI 411
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 76/276 (27%), Positives = 124/276 (44%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTI-RIWNWQSR 125
+SG D IK+W+ CL L GH + +Q+ IV+ S D T+ R+W+ +
Sbjct: 234 ISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERV--IVTGSSDSTVSRVWDVNTG 291
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-----LRKKTVS--PADDI 178
++ L HN V+ F L+V+ S D+++ VWD+ + LR+ V A ++
Sbjct: 292 EVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 349
Query: 179 LRLSQMNTDLFGGVDAVVK--------YV--LEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ G D +K +V L GH RG+ + L +VSG+ D +
Sbjct: 350 VDFDDKYIVSASG-DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 406
Query: 229 KLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK----RTGVQ 284
+LW + E A + L GH V C+ F K+ IVS + D I+VWD+ R
Sbjct: 407 RLWDI-ECGAC-LRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAPAS 462
Query: 285 TF--RR--EHDRFWILASHPEMNLLAAGHDSGMIVF 316
T R EH E ++++ HD ++++
Sbjct: 463 TLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 498
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 18 HSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKV 77
+ +R + S S V ++WD G +++ H+ V +H S L V+ D I V
Sbjct: 268 YDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAV 325
Query: 78 WNYKMHRCLF---TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
W+ + L+GH + V F +Y IVSAS D+TI++W+ + + L GH
Sbjct: 326 WDMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGH 383
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTD--LFG 190
+ C + ++ LVVS S D T+R+WDI GA + + ++++R + + + G
Sbjct: 384 KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDNKRIVSG 440
Query: 191 GVDAVVK 197
D +K
Sbjct: 441 AYDGKIK 447
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/117 (35%), Positives = 55/117 (47%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F VS D IKVW+ + TL GH I +Q+ +V
Sbjct: 343 HRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VV 398
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
S S D TIR+W+ + C+ VL GH V C F K +VS + D ++VWD+ A
Sbjct: 399 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQA 453
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V + F K +I+++ I++W + + H + + + L VSG
Sbjct: 347 VNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSS 402
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ-------- 123
D I++W+ + CL L GH + +R ++F ++ IVS + D I++W+ Q
Sbjct: 403 DNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWDLQAALDPRAP 460
Query: 124 -SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
S C+ L H+ V F E ++S+S D T+ +WD
Sbjct: 461 ASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWD 499
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 219 (82.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 65/257 (25%), Positives = 110/257 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V + P++
Sbjct: 207 HLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLF 266
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D+ ++ W+ + I GH V HP D++V+ S D T RVWDI
Sbjct: 267 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKAN 326
Query: 170 --------------KTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFH 213
K S ++ + +T L+ V + L H + V H
Sbjct: 327 VHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLH 386
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P SG+ D +K W+ + + L GH ++ + ++ ++VS +++ +I
Sbjct: 387 PRQYTFASGSPDN-IKQWKFPDGNF--IQNLSGHNAIINTLAVNS-DGVLVSGADNGTIH 442
Query: 274 VWDVTKRTGVQTFRREH 290
+WD RTG F+R H
Sbjct: 443 MWDW--RTGYN-FQRIH 456
Score = 207 (77.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 58/235 (24%), Positives = 102/235 (43%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 211 VRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGE 270
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T R+W+ +++ + L
Sbjct: 271 DKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTL 330
Query: 132 TGHNHYVMCASFHPKEDLVVSA-SLDQTVRVWDI--GALRKKTVSPADDILRL---SQMN 185
+GH + V E VV+ S D T+R+WD+ G R + + L +
Sbjct: 331 SGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQY 390
Query: 186 TDLFGGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
T G D + ++ L GH+ +N A + ++VSGAD+ + +W
Sbjct: 391 TFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSD-GVLVSGADNGTIHMW 444
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 62/255 (24%), Positives = 106/255 (41%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R++ W V+ S D+TI+IW+ S LTGH
Sbjct: 194 WHPPWKLYR---VISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 250
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + + S D+ V+ WD+ A+ + P D+L
Sbjct: 251 STVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTC 310
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVS-GADDRQVKLWRMNETKAW 239
S+ T + + L GH V P +V+ G+ D ++LW + K
Sbjct: 311 SRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTR 370
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
TL H +V ++ H +Q S S D +I+ W +Q + LA +
Sbjct: 371 A--TLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLAVN 427
Query: 300 PEMNLLAAGHDSGMI 314
+ +L +G D+G I
Sbjct: 428 SD-GVLVSGADNGTI 441
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/187 (25%), Positives = 78/187 (41%)
Query: 9 SNRVKGLSFHSKRPWILA-SLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
+N V + S P ++ H I+LWD G H VR + H Q F
Sbjct: 334 TNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFA 393
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS--- 124
SG D IK W + + L GH I T+ + + +VS +D+ TI +W+W++
Sbjct: 394 SGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGV-LVSGADNGTIHMWDWRTGYN 451
Query: 125 --RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW---DIGALRKKTVSPAD 176
R +V G + F E +++A D+T++V+ D V+
Sbjct: 452 FQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVYKEDDTATEESHPVNWKP 511
Query: 177 DILRLSQ 183
+IL+ Q
Sbjct: 512 EILKRKQ 518
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 224 (83.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 71/279 (25%), Positives = 128/279 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHF--HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
+++W+ G L+ +DEH V HF + + L +G +DY +K+W+ C T+
Sbjct: 683 VKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMF 742
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH + + +F + + S S D T+++W+ +S + ++ S P+EDL
Sbjct: 743 GHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSINVKQFFLN--SEEPQEDLE 800
Query: 151 VSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNW 209
V W GA K + A + + L +++ G+ A + GH V +
Sbjct: 801 VIVKCCS----WSADGA---KIMVAAKNKVFLFDIHSS---GLLAEMHM---GHHSAVQY 847
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
F P L V V+LW M+ +V RGH++ V CVMF +++S+D
Sbjct: 848 CDFSPHNHLAVVALSQYCVELWSMDS--GLKVADCRGHLSWVHCVMFSPDGSSFLTSSDD 905
Query: 270 KSIRVWDVTK--RTGVQTFRREHDRFWILASHPEMNLLA 306
++IR+W+ K + ++E D ++ E+ +LA
Sbjct: 906 QTIRLWETKKVCKNSATVLKQEID---VVFQENEVTVLA 941
Score = 153 (58.9 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 51/182 (28%), Positives = 82/182 (45%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG+D I++ +R + GH +R +QF + ++S+SDD ++IWNWQS
Sbjct: 981 GGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPF 1040
Query: 129 SVLTGHNHYVMCASFHP-KEDLVVSASLDQTVRVWDIGALR--KKTVSPADDILR--LSQ 183
L H V F K ++S S D TV+VW+I R K V D +L +S
Sbjct: 1041 -FLQAHQETVK--DFRLLKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISS 1097
Query: 184 MNTDLFG-GVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
T D K + L GH V ++F L+ +G D+ ++++W
Sbjct: 1098 DATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWN 1157
Query: 233 MN 234
++
Sbjct: 1158 VS 1159
Score = 144 (55.7 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 47/217 (21%), Positives = 98/217 (45%)
Query: 74 KIKVWNYKMHRC--LFTL-LGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRTCIS 129
K KV+ + +H L + +GH ++ F H + +V+ S + +W+ S ++
Sbjct: 820 KNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQ-YCVELWSMDSGLKVA 878
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA-DDILRLSQMNTDL 188
GH +V C F P +++S DQT+R+W+ + K + + +I + Q N
Sbjct: 879 DCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEVT 938
Query: 189 FGGVDAVVKYVLEGHDRG---------VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
VD + + L + G V+ P L + G +D +++ + + +
Sbjct: 939 VLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIF 998
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
+ + GH V + F A ++S+S+D ++++W+
Sbjct: 999 Q--SRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN 1033
Score = 136 (52.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 36/155 (23%), Positives = 70/155 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKSQPLFVSG 69
V+ + F + +++S +Q+W+++ D F H V+ K+ L +S
Sbjct: 1008 VRHIQFTADGKTLISSSDDSAVQIWNWQSE---DPFFLQAHQETVKDFRLLKNSRL-LSW 1063
Query: 70 GDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129
D +KVWN R + H D + + + S S D+T +IW+++ + +
Sbjct: 1064 SFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLH 1123
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH V C+SF L+ + + +R+W++
Sbjct: 1124 ELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNV 1158
Score = 135 (52.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 32/159 (20%), Positives = 67/159 (42%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+Q++ G + H+ V F + D K+K+WN + H
Sbjct: 641 LQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEH 700
Query: 93 LDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
+ + F + + + + S+D +++W+ C + + GH + V F P + ++
Sbjct: 701 SEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVL 760
Query: 151 VSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDL 188
S S D T+++WD+ A +K+++ L + DL
Sbjct: 761 ASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDL 799
Score = 54 (24.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 25 LASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYK 81
+ +L ++LW G + H V V F F++ DD I++W K
Sbjct: 858 VVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 914
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 221 (82.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+S G ++LW + T + + H+ PV F FVS
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + ++H ++ + S D+T+R+W+ + C+
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 700
Score = 195 (73.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 60/224 (26%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S+S+D T+R+W+ Q+ TC+
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPADDILRLSQMNTD 187
GHN+ V F P VS D+ R+W LR AD N++
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN 641
Query: 188 LF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ F P + +GA D +V LW +
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + V + F +I+ S S D ++R+WD K
Sbjct: 702 --GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
Score = 183 (69.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/206 (26%), Positives = 86/206 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 602
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C +HP + V + S D+TVR+WD+
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNC 662
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + T SP L + L+ ++ L+GH V F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE 240
++ SG+ D V+LW + KA+E
Sbjct: 723 DGEILASGSMDNTVRLW--DAVKAFE 746
Score = 151 (58.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 56/228 (24%), Positives = 95/228 (41%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V ASF P + ++S+S
Sbjct: 505 LRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSE 564
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 565 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH VN +HP + +G+ DR V+LW + + T GH + + F
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLTFSPNG 682
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D L + +LA+G
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASG 730
Score = 149 (57.5 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 58/241 (24%), Positives = 95/241 (39%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
C +T L + V + I D T+R+W+ + SV + S
Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASD-----LSLI 517
Query: 145 PKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAVV 196
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 518 DKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 577
Query: 197 KYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 578 CLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVNCT 634
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
+H + + + S D+++R+WDV V+ F L P LA G G +
Sbjct: 635 RYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 694
Query: 315 V 315
+
Sbjct: 695 L 695
Score = 136 (52.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V +H + +G D +++W+ C+
Sbjct: 606 HDRVARLWATDHYQPLRI--FAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH V F
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 724 GEILASGSMDNTVRLWD 740
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
+H ++ ++LWD G + F H GP+ + F + +G D ++
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D + +++F + + S S D T+R+W+
Sbjct: 696 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 43 (20.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T V + +S D E +A
Sbjct: 675 SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 728
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 219 (82.2 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 78/266 (29%), Positives = 119/266 (44%)
Query: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
ILAS + I+LW+ + + H V + F + + +SG D I++WNY+
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRT 342
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
C+ L GH D + + F + +VS S D T+++W++ I+ L GH V
Sbjct: 343 SECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVR 399
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALR-KKTVSP-ADDILRLSQMNTDLFG-GVDAVVK-- 197
LV+S S D T+++W + T S + L+ ++ LF +D +K
Sbjct: 400 IIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQW 459
Query: 198 --------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
+ L GH GV W L LI SGA D VK+W E V TL+ H
Sbjct: 460 DIEKKKCVHTLFGHIEGV-WEIAADHLRLI-SGAHDGVVKVWEACEC----VHTLKNHSE 513
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVW 275
V+ V + +VS SED I +W
Sbjct: 514 PVTSVALGDCE--VVSGSEDGKIYLW 537
Score = 218 (81.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 71/250 (28%), Positives = 117/250 (46%)
Query: 79 NYKMHRCLFTLL-GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHY 137
N++ RC +L GH D + +Q + S S D TIR+WN + +++L GH+
Sbjct: 258 NWRHGRCRQVVLSGHSDGVMCLQLVRNI--LASGSYDATIRLWNLATFQQVALLEGHSSG 315
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV--SPADDILRLSQMNTDLFGG-VDA 194
V C F + ++S S+D+T+R+W+ ++ D +L L+ +T L G D
Sbjct: 316 VTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADC 373
Query: 195 VVKY---------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
VK L GH VN L++SG+DD +K+W + ET + T
Sbjct: 374 TVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL-ETNTC-LHTFS 431
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW-ILASHPEMNL 304
H+ V + + + S S D +I+ WD+ K+ V T + W I A H + L
Sbjct: 432 AHIGPVQSLALADSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADH--LRL 487
Query: 305 LAAGHDSGMI 314
++ HD G++
Sbjct: 488 ISGAHD-GVV 496
Score = 209 (78.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 63/225 (28%), Positives = 109/225 (48%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+ SG D I++WN + + L GH + +QF + ++S S D+TIRIWN+++
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRT 342
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV----SPADDILR 180
CIS+L GH V+C +F L+VS S D TV++W ++ T+ P + +
Sbjct: 343 SECISILHGHTDSVLCLTFD--STLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRI 400
Query: 181 LSQMNTDLFGGVDAVVK-YVLEGHDRGVNWAA-FHPTLPLIVSGAD------DRQVKLWR 232
+ L G D+ +K + LE + ++A P L ++ + D +K W
Sbjct: 401 IRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWD 460
Query: 233 MNETKAWEVDTLRGHMNNV-SCVMFHAKQDIIVSNSEDKSIRVWD 276
+ + K V TL GH+ V H + ++S + D ++VW+
Sbjct: 461 IEKKKC--VHTLFGHIEGVWEIAADHLR---LISGAHDGVVKVWE 500
Score = 204 (76.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 70/268 (26%), Positives = 121/268 (45%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E S+ V L F + +++ I++W+YR I H V + F + L
Sbjct: 310 EGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST--L 365
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
VSG D +K+W++ + + TL GH + +V+ + ++S SDD TI+IW+ ++
Sbjct: 366 LVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN 424
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA----DDILRL 181
TC+ + H V + + + S SLD T++ WDI +KK V + + +
Sbjct: 425 TCLHTFSAHIGPVQSLAL--ADSRLFSCSLDGTIKQWDIE--KKKCVHTLFGHIEGVWEI 480
Query: 182 SQMNTDLFGGV-DAVVK--------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
+ + L G D VVK + L+ H V A +VSG++D ++ LW
Sbjct: 481 AADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVALGDCE--VVSGSEDGKIYLWL 538
Query: 233 MNE--------TKAWEVDTLRGHMNNVS 252
N T++ + +L G +N S
Sbjct: 539 FNNAPNESPVSTQSVPISSLNGQRSNSS 566
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 229 (85.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 42/156 (26%), Positives = 74/156 (47%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S+ + ++F + + A SG I+LWD ++ H V+FH F S
Sbjct: 59 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFAS 118
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G D +K+W+ + C+ T GH + ++F + WIVS +D +++W+ + +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 178
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
H + FHP E L+ + S D+TV+ WD+
Sbjct: 179 HEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 214
Score = 216 (81.1 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 44 IDRFDEHDGPVRGVHF-HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH 102
+ F H V + KS + V+GG+D+K+ +W + +L GH I +V F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ + + TI++W+ + + LTGH + +FHP + S SLD +++W
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 128
Query: 163 DI---GALRK-KTVSPADDILRLSQMNTDLF-GGVDAVVK----------YVLEGHDRGV 207
DI G + K + ++LR + + GG D VVK + + H+ +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 188
Query: 208 NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG-HMNNVSCVMFHAK-QDIIVS 265
FHP L+ +G+ D+ VK W + ET +E+ G V C+ F+ + ++
Sbjct: 189 QSLDFHPHEFLLATGSADKTVKFWDL-ET--FELIGSGGTETTGVRCLTFNPDGKSVLCG 245
Query: 266 NSEDKSIRVWD 276
E I W+
Sbjct: 246 LQESLKIFSWE 256
Score = 167 (63.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 53/228 (23%), Positives = 95/228 (41%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+V+ +D + +W I L GH+ + +F E LV + + T+++WD+
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEA 91
Query: 168 ---------RKKTVS----PADDILRLSQMNTDLFGGVDAVVK---YVLEGHDRGVNWAA 211
R VS P + ++T+L D K + +GH RGVN
Sbjct: 92 KVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW-DIRKKGCIHTYKGHTRGVNVLR 150
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
F P IVSG +D VK+W + K + + H + + FH + ++ + S DK+
Sbjct: 151 FTPDGRWIVSGGEDNVVKVWDLTAGKL--LHEFKSHEGKIQSLDFHPHEFLLATGSADKT 208
Query: 272 IRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLE 319
++ WD+ + + E L +P+ + G + +F E
Sbjct: 209 VKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
Score = 163 (62.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 46/166 (27%), Positives = 68/166 (40%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
L +F S V L K +L + + LW I H + V F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
S+ L +G IK+W+ + + + TL GH +V FH + S S D ++IW
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 128
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+ + + CI GH V F P +VS D V+VWD+ A
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTA 174
Score = 141 (54.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 39/159 (24%), Positives = 74/159 (46%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
+SN V ++FH + + +++WD R I + H V + F V
Sbjct: 101 RSNCVS-VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIV 159
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
SGG+D +KVW+ + L H I+++ FH HE+ + + S D+T++ W+ ++
Sbjct: 160 SGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEF-LLATGSADKTVKFWDLETFE 218
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV--WD 163
I V C +F+P V+ L +++++ W+
Sbjct: 219 LIGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIFSWE 256
Score = 42 (19.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 32/126 (25%), Positives = 48/126 (38%)
Query: 275 WDVTKRTGVQTFRREHDRF--WILASHPEMNLLAAGHD--SGMIVFKLERER-PAFAVSG 329
WD +RT ++ R RF L P N HD S +I + R+ P + G
Sbjct: 553 WDTAERTNKESKCRVFGRFNSRSLVRSPPRN-----HDENSDLISYNANRDSSPTESRKG 607
Query: 330 D---SLFYAKDRFLRYYEF-----STQKDTQVIPIRRPGSTSLNQSPRTLSYSPTENAVL 381
SL ++R R+ F S+ P RP S L Q ++ P + +
Sbjct: 608 GRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSRP-SNMLKQRG---NHVPVDQGIT 663
Query: 382 ICSDVD 387
S+ D
Sbjct: 664 SASEED 669
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 217 (81.4 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 65/256 (25%), Positives = 110/256 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V P++
Sbjct: 202 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 261
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D+ ++ W+ + I GH V HP D++V+ S D T R+WD+
Sbjct: 262 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKAS 321
Query: 170 -KTVSP---ADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGVNWAAFHP 214
T+S A +R + G D ++ L H + V HP
Sbjct: 322 VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP 381
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
L SG+ D +K W+ + + L GH ++ + +A ++VS +++ ++ +
Sbjct: 382 LLYTFASGSPDN-IKQWKFPD--GGFIQNLSGHNAIINTLAVNA-DGVLVSGADNGTMHL 437
Query: 275 WDVTKRTGVQTFRREH 290
WD RTG F+R H
Sbjct: 438 WDW--RTGYN-FQRVH 450
Score = 212 (79.7 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 58/234 (24%), Positives = 107/234 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T RIW+ +++ + L
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTL 325
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMNTDLF- 189
+GH + V E +++ S D T+R+WD+ A + + T++ +R ++ L+
Sbjct: 326 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYT 385
Query: 190 ---GGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N A + ++VSGAD+ + LW
Sbjct: 386 FASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNAD-GVLVSGADNGTMHLW 438
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 63/252 (25%), Positives = 103/252 (40%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R + W V+ S D+TI+IW+ S LTGH
Sbjct: 189 WHPPWKLYR---VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 245
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + S D+ V+ WD+ A+ + P D+L
Sbjct: 246 STVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTC 305
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
S+ +T V + L GH V P I++G+ D ++LW + K
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT-R 364
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V V+ H S S D +I+ W +Q + LA +
Sbjct: 365 V-TLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNA 422
Query: 301 EMNLLAAGHDSG 312
+ +L +G D+G
Sbjct: 423 D-GVLVSGADNG 433
Score = 139 (54.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P I+ H I+LWD G H VR V H F S
Sbjct: 329 TNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFAS 388
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
G D IK W + + L GH I T+ + + +VS +D+ T+ +W+W++
Sbjct: 389 GSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNADGV-LVSGADNGTMHLWDWRTGYNF 446
Query: 125 -RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW 162
R +V G + +F E +++A D+T++V+
Sbjct: 447 QRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 488
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 216 (81.1 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 62/241 (25%), Positives = 107/241 (44%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR V F S F +G D IK+W+ TL GH+ +R + + + ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMF 228
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
SA DD+ ++ W+ + I GH H V C + HP D+V++ D RVWDI +
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ 288
Query: 170 KTVSPAD-DILRLSQMNTD---LFGGVDAVVKY----------VLEGHDRGVNWAAFHPT 215
V P D D+ + TD + G D+ +K+ + H + V A HP
Sbjct: 289 IFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPK 348
Query: 216 LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
VS + D +K + + + + + L + ++ V + + ++V+ + + W
Sbjct: 349 ENDFVSASADN-IKKFSLPKGEFCH-NMLSLQRDIINAVAVN-EDGVMVTGGDKGGLWFW 405
Query: 276 D 276
D
Sbjct: 406 D 406
Score = 182 (69.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 38/153 (24%), Positives = 69/153 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++F W I++WD G L H G VRG+ S GD
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + + GHL + + H +++ D R+W+ +++ I VL
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVL 292
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
H+ V P + V++ S D T++ WD+
Sbjct: 293 P-HDSDVFSVLARPTDPQVITGSHDSTIKFWDL 324
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 54/198 (27%), Positives = 93/198 (46%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI--LRLSQMN 185
VL GH +V +F P + + S D+T+++WD+ G L+ + L +S +
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 186 TDLFG-GVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
T +F G D VK + LE GH GV A HPTL ++++G D ++W +
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIR 284
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
TK ++ L H ++V V+ +++ S D +I+ WD+ + T
Sbjct: 285 -TKM-QIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVR 341
Query: 295 ILASHPEMN-LLAAGHDS 311
+A HP+ N ++A D+
Sbjct: 342 AMALHPKENDFVSASADN 359
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 55/206 (26%), Positives = 94/206 (45%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L GHL ++R+V F W + S D+TI+IW+ + LTGH V + +
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 149 LVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNTDLFGGVDAVVK------ 197
+ SA D+ V+ WD+ + + + L+ ++ L GG D+V +
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT 285
Query: 198 ----YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
+VL HD V PT P +++G+ D +K W + K+ + T+ H V
Sbjct: 286 KMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKS--MATITNHKKTVRA 342
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTK 279
+ H K++ VS S D +I+ + + K
Sbjct: 343 MALHPKENDFVSASAD-NIKKFSLPK 367
Score = 164 (62.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 48/201 (23%), Positives = 94/201 (46%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V+GL+ ++ ++ ++ ++ WD +I + H V + H + + ++GG
Sbjct: 214 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGG 273
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
D +VW+ + +F +L H + +V P +++ S D TI+ W+ + ++
Sbjct: 274 RDSVCRVWDIRTKMQIF-VLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMAT 332
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTDL 188
+T H V + HPKE+ VSAS D ++ + + G +S DI+ +N D
Sbjct: 333 ITNHKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDIINAVAVNED- 390
Query: 189 FGGVDAVVKYVLEGHDRGVNW 209
GV ++ G D+G W
Sbjct: 391 --GV------MVTGGDKGGLW 403
Score = 45 (20.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL 244
+ G+ A + T +V+ D+ +K+W+ +E E L
Sbjct: 428 EAGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDATPETHPL 468
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 210 (79.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 64/251 (25%), Positives = 114/251 (45%)
Query: 41 GTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQ 100
G + F+ H G V +++ L SG D+ KVWN + + H +++V
Sbjct: 52 GDWVGTFEGHKGAVWNATLNRNATLAASGAADFTGKVWNAVTGAEIHSFQ-HKHIVKSVA 110
Query: 101 FHHEYPWIVSASDDQTIRIWNW-QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTV 159
F + IV+ S+++ +R++N Q GH + A F + ++SA+ D+TV
Sbjct: 111 FDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCIISAAEDKTV 170
Query: 160 RVWD----IGALRKK--------TVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGV 207
R+WD I R + +S + IL +S ++ F +D + K V
Sbjct: 171 RLWDRMTGIEVQRLQFNSNPNSLEISSDNHILTISHGSSISFWEIDTLKKLKEVKVPTNV 230
Query: 208 NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS 267
A+ HP + V G +D K+++ + E+++ +GH V V F ++ S S
Sbjct: 231 ASASLHPDKHVFVCGGED--FKMYKFDYITGNEIESFKGHFGPVHSVKFSPDGELYASGS 288
Query: 268 EDKSIRVWDVT 278
ED ++R+W T
Sbjct: 289 EDGTLRLWQTT 299
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL-FTLLGH 92
++W+ G I F +H V+ V F + V+G ++ ++V+N + GH
Sbjct: 87 KVWNAVTGAEIHSF-QHKHIVKSVAFDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGH 145
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT-GHNHYVMCASFHPKEDLVV 151
I+ F I+SA++D+T+R+W+ + + L N + S ++ ++
Sbjct: 146 TGAIKRALFCRGDKCIISAAEDKTVRLWDRMTGIEVQRLQFNSNPNSLEIS---SDNHIL 202
Query: 152 SASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD--LF--GGVD-AVVK--YV---- 199
+ S ++ W+I L+K K V ++ S ++ D +F GG D + K Y+
Sbjct: 203 TISHGSSISFWEIDTLKKLKEVKVPTNVASAS-LHPDKHVFVCGGEDFKMYKFDYITGNE 261
Query: 200 ---LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
+GH V+ F P L SG++D ++LW+ K +
Sbjct: 262 IESFKGHFGPVHSVKFSPDGELYASGSEDGTLRLWQTTVGKTY 304
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 181 (68.8 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G ++LWD R I F ++ V V F+ + +SGG D IKVW+ + ++ +T+
Sbjct: 174 GTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 232
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ----SRTCISVLTG--HN---HYVMCA 141
GH D + + E +++S + D T+R+W+ + C+ + G HN + + C
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 291
Query: 142 SFHPKEDLVVSASLDQTVRVWDIGALR 168
S+ P + + S D+ V VWD + R
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRR 318
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASF 143
+ L GH + +FH + SA D+ I +WN C + L GH+ VM +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 117
Query: 144 HPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRL--SQMNTDLF--GGVDAVVK 197
+ ++ SAS D+TV VWD G K+ + ++ L G D VK
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 198 Y-------VLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
++ A F+ T I+SG D +K+W + + K T+RGH
Sbjct: 178 LWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA 235
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
++V+ + ++ ++SN+ D ++RVWDV
Sbjct: 236 DSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 164 (62.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H+G V FH + S G D I +WN Y TL GH + + ++ + +
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYV-MCASFHPKEDLVVSASLDQTVRVWDIGAL 167
SAS D+T+ +W+ ++ + L GH +V C LV + S D TV++WDI
Sbjct: 125 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 181
Query: 168 RKK----TVSPADDILRLSQMNTD---LFGGVDAVVK----------YVLEGHDRGVNWA 210
RKK T +L ++ +T + GG+D +K Y + GH V
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 241
Query: 211 AFHPTLPLIVSGADDRQVKLW 231
+ ++S A D V++W
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVW 262
Score = 148 (57.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV- 67
S V L +++ + ++ + +WD G + R H V + + P V
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 168
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G DD +K+W+ + + T + V F+ I+S D I++W+ +
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ GH V S + ++S ++D TVRVWD+ + +P + +++ Q N
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV-----RPFAPKERCVKIFQGNVH 282
Query: 188 LF 189
F
Sbjct: 283 NF 284
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/144 (22%), Positives = 71/144 (49%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+++G D L+GH V ++ ++ S + D+ V +W +ET V L+G
Sbjct: 94 NVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGE-RVKRLKG 149
Query: 247 HMNNV-SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLL 305
H + V SC ++ + S+D ++++WD+ K+ +QTF+ + + + ++
Sbjct: 150 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 209
Query: 306 AAGHDSGMIVFKLERERPAFAVSG 329
+ G D+ + V+ L + + + + G
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRG 233
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V ++F+ I++ I++WD R L H V G+ +S
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 254
Query: 71 DDYKIKVWNYK----MHRCLFTLLGHL-DYIRTV---QFHHEYPWIVSASDDQTIRIWNW 122
D ++VW+ + RC+ G++ ++ + + + + I + S D+ + +W+
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SR + L GH + +FHP E +++SAS D+ + + +I
Sbjct: 315 TSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 79 (32.9 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
I +G+ DR V +W + T + L GH +++ V FH + II+S S DK + + ++
Sbjct: 300 IAAGSADRFVYVW--DTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 77 (32.2 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ Y L GH +N AFHP P+I+S + D+++
Sbjct: 319 ILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 222 (83.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 64/250 (25%), Positives = 115/250 (46%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHF--HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
+++W+ G L+ +DEH V HF + + L +G DY +K+W+ C T+
Sbjct: 681 VKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMF 740
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH + + +F + + S S D T+++W+ +S + ++ S +ED+
Sbjct: 741 GHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN--SEESQEDME 798
Query: 151 VSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNW 209
V W GA V+ + +L L ++T GG+ A + GH + +
Sbjct: 799 VMVKCCS----WSADGA--SLVVAAKNKVL-LFNIHT---GGLLAEIH---TGHHSTIQY 845
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
F P+ L V V+LW M+ +V RGH++ V C MF +++S+D
Sbjct: 846 CDFSPSNHLAVVALSQYCVELWNMDS--CLKVADCRGHLSWVHCAMFSPDGSSFLTSSDD 903
Query: 270 KSIRVWDVTK 279
++IR+W+ K
Sbjct: 904 ETIRLWETKK 913
Score = 168 (64.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G DD I+V +R + H + +R +QF + ++S+SDD I++WNWQS +
Sbjct: 979 GSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV 1038
Query: 129 SVLTGHNHYVMCASFHP-KEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIL------ 179
S L H V F K ++S S D TV+VW+I G + K V D +L
Sbjct: 1039 S-LQAHQETVK--DFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISP 1095
Query: 180 ---RLSQMNTDLFGGV---DAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
+ S + D + D + + L GH V +AF L+ +G D+ ++++W
Sbjct: 1096 DATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWN 1155
Query: 233 MN 234
++
Sbjct: 1156 VS 1157
Score = 150 (57.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH I+ F V A + +WN S ++ GH +V CA F P
Sbjct: 838 GHHSTIQYCDFSPSNHLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSF 897
Query: 151 VSASLDQTVRVWDIG--------ALRKK--TVSPADDILRLSQMNT---DLFGGVDAVVK 197
+++S D+T+R+W+ L KK V ++++ L+ N + G +
Sbjct: 898 LTSSDDETIRLWETKKVCKNSAIVLNKKIDVVFQENEVMVLAVDNIRRLQVINGKTGQID 957
Query: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
Y+ E V+ P L + G+DD +++ + + ++ T H N V + F
Sbjct: 958 YLTEAQ---VSCCCLSPHLQYLAFGSDDGAIQVLELLNNRLFQSRTR--HKNTVRHIQFT 1012
Query: 258 AKQDIIVSNSEDKSIRVWD 276
++S+S+D +I+VW+
Sbjct: 1013 TDGKNVISSSDDSAIQVWN 1031
Score = 137 (53.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 32/159 (20%), Positives = 68/159 (42%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+Q++ G + H+ V F + D K+K+WN + + H
Sbjct: 639 LQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEH 698
Query: 93 LDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
+ + F + + + + S D +++W+ + C + + GH + V F P + L+
Sbjct: 699 SEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLL 758
Query: 151 VSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDL 188
S S D T+++WD+ A +K+++ L + D+
Sbjct: 759 ASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDM 797
Score = 137 (53.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
N V+ + F + +++S IQ+W+++ + H V+ K+ L +S
Sbjct: 1004 NTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVS-LQAHQETVKDFRLLKNSRL-LSW 1061
Query: 70 GDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129
D +KVWN R + H D + + + S S D+T +IW++ + +
Sbjct: 1062 SFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLH 1121
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH V C++F L+ + + +R+W++
Sbjct: 1122 ELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNV 1156
Score = 81 (33.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 173 SPADD--ILRLSQMNTDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
SP++ ++ LSQ +L+ +D+ +K GH V+ A F P ++ +DD ++
Sbjct: 849 SPSNHLAVVALSQYCVELWN-MDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIR 907
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRRE 289
LW ETK ++ +N V+F + ++++ + ++V + +TG + E
Sbjct: 908 LW---ETKKVCKNSAIV-LNKKIDVVFQENEVMVLAVDNIRRLQV--INGKTGQIDYLTE 961
Query: 290 HDRFWILASHPEMNLLAAGHDSGMI-VFKLERER 322
S P + LA G D G I V +L R
Sbjct: 962 AQVSCCCLS-PHLQYLAFGSDDGAIQVLELLNNR 994
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 222 (83.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 77/316 (24%), Positives = 139/316 (43%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF-H 60
L + + V +F S +I +++WD G L+ +DEH V HF +
Sbjct: 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTN 709
Query: 61 KSQPLFVS-GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
KS L ++ G +D+ +K+W+ C T+ GH + + +F + + S S D T+R+
Sbjct: 710 KSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRL 769
Query: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
W+ +S + ++ +S P ED+ V V+ A K + A + +
Sbjct: 770 WDVRSANERKSINVKRFFL--SSEDPPEDVEV------IVKCCSWSADGDKIIVAAKNKV 821
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
L ++T G+ A + GH + + F P L V V+LW ++
Sbjct: 822 LLFDIHTS---GLLAEIH---TGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL-- 873
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK--RTGVQTFRREHDRFWILA 297
+V RGH++ V VMF ++ S+D++IRVW+ K + ++E D ++
Sbjct: 874 KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEID---VVF 930
Query: 298 SHPEMNLLAAGHDSGM 313
E +LA + G+
Sbjct: 931 QENETMVLAVDNIRGL 946
Score = 153 (58.9 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 61/245 (24%), Positives = 113/245 (46%)
Query: 66 FVSGGD-DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+V+ GD D IK+ +R + +GH +R +QF + ++S+S+D I++WNWQ+
Sbjct: 975 YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034
Query: 125 RTCISVLTGHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI--GALRKK------TV--- 172
+ L H V F +D ++S S D TV+VW++ G + + TV
Sbjct: 1035 GDYV-FLQAHQETVK--DFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSC 1091
Query: 173 SPADDILRLSQMNTDLFGGV---DAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ + D + S + D + D + + L+GH+ V +AF L+ +G D+ ++
Sbjct: 1092 AISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEI 1151
Query: 229 KLWRMNETKAWE----VDTLRG---HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRT 281
++W +++ + + G H V+ V F +VS ++ W+V
Sbjct: 1152 RIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG--YLKWWNVATGD 1209
Query: 282 GVQTF 286
QTF
Sbjct: 1210 SSQTF 1214
Score = 142 (55.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/258 (19%), Positives = 109/258 (42%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+Q++ G + H+ V F + D K+K+W+ + + T H
Sbjct: 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEH 698
Query: 93 LDYIRTVQFHHE--YPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
+ + F ++ + + + S+D +++W+ + C + + GH + V F P ++L+
Sbjct: 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELL 758
Query: 151 VSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNW 209
S S D T+R+WD+ A +K+++ + R + D V+ +VK +W
Sbjct: 759 ASCSADGTLRLWDVRSANERKSIN----VKRFFLSSEDPPEDVEVIVKCC--------SW 806
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
+A + IV+ + +V L+ ++ T + GH + + F + V
Sbjct: 807 SADGDKI--IVAAKN--KVLLFDIH-TSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ 861
Query: 270 KSIRVWDVTKRTGVQTFR 287
+ +W++ R V R
Sbjct: 862 YCVELWNIDSRLKVADCR 879
Score = 130 (50.8 bits), Expect = 0.00027, P = 0.00027
Identities = 35/153 (22%), Positives = 68/153 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ + F + +++S VIQ+W+++ G + H V+ + L +S
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDSRL-LSWSF 1063
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +KVWN R H + + + S S D+T +IW++ + + L
Sbjct: 1064 DGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHEL 1123
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
GHN V C++F L+ + + +R+W++
Sbjct: 1124 KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNV 1156
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 219 (82.2 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S V G SF R ++L+ G ++LW + T + + H+ PV F FVS
Sbjct: 523 SGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 582
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG D ++W ++ L GHL + +FH +I + S D+T+R+W+ + C+
Sbjct: 583 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCV 642
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+ TGH + +F P + + + D V +WDIG
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIG 679
Score = 200 (75.5 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 60/224 (26%), Positives = 96/224 (42%)
Query: 71 DDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISV 130
DD ++ + K L L GH + F + +++S S+D T+R+W+ Q+ TC+
Sbjct: 501 DDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVG 560
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG---ALRKKTVSPADDILRLSQMNTD 187
GHN+ V F P VS D+ R+W LR AD N++
Sbjct: 561 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 620
Query: 188 LF--GGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
G D V+ + GH ++ AF P + +GA D +V LW +
Sbjct: 621 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGH 680
Query: 236 TKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTK 279
V L+GH + + + F +I+ S S D ++R+WD K
Sbjct: 681 --GLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVK 722
Score = 178 (67.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/206 (25%), Positives = 85/206 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H GPV G F + +S +D +++W+ + CL GH + QF + V
Sbjct: 522 HSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 581
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S D+ R+W + + GH V C FHP + + + S D+TVR+WD+
Sbjct: 582 SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNC 641
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
G + SP L + L+ ++ L+GH + F
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR 701
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWE 240
++ SG+ D V+LW + KA+E
Sbjct: 702 DGEILASGSMDNTVRLW--DAVKAFE 725
Score = 164 (62.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 62/241 (25%), Positives = 97/241 (40%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFH 144
C +T L + V + IV D T+R+W+ + SV + S
Sbjct: 442 CFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKAAAD-----LSLI 496
Query: 145 PKE-DLVVSASLDQ-TVRVWDI-----GALRKKTVSPADD-ILRLSQMNTDLFGGVDAVV 196
KE D V+ +D+ T I G + + SP + +L S+ T +
Sbjct: 497 DKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFT 556
Query: 197 KYV-LEGHDRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
V +GH+ V W F P VSG DR +LW + + + GH+ +V+C
Sbjct: 557 CLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI--FAGHLADVTCT 613
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI 314
FH + I + S D+++R+WDV V+ F LA P LA G G +
Sbjct: 614 RFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRV 673
Query: 315 V 315
+
Sbjct: 674 L 674
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 56/228 (24%), Positives = 93/228 (40%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R+V+ + I SDD RI + ++ + + +L GH+ V SF P + ++S S
Sbjct: 484 LRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSE 543
Query: 156 DQTVRVWDIGALR-----KKTVSPADDILRLSQMNTDLFGGVDAVVK------Y----VL 200
D TVR+W + K P D + GG D V + Y +
Sbjct: 544 DGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 603
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
GH V FHP I +G+ DR V+LW + + T GH + + F
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFT--GHKGPIHSLAFSPNG 661
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + D + +WD+ V + D + L + +LA+G
Sbjct: 662 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASG 709
Score = 139 (54.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/137 (24%), Positives = 58/137 (42%)
Query: 29 HSGVIQLW--DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCL 86
H V +LW D+ I F H V FH + +G D +++W+ C+
Sbjct: 585 HDRVARLWATDHYQPLRI--FAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCV 642
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
GH I ++ F ++ + + D + +W+ + L GH + F
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRD 702
Query: 147 EDLVVSASLDQTVRVWD 163
+++ S S+D TVR+WD
Sbjct: 703 GEILASGSMDNTVRLWD 719
Score = 133 (51.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 27/105 (25%), Positives = 47/105 (44%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH +I ++LWD G + F H GP+ + F + +G D ++
Sbjct: 615 FHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL 674
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+W+ + L GH D I ++F + + S S D T+R+W+
Sbjct: 675 LWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 457 AIFYAGTGNLLCR-AED-RVVIFDLQQRLVLGDLQ--TPFVKYVVWSNDMESVA 506
++ ++ G L A D RV+++D+ L++G+L+ T + + +S D E +A
Sbjct: 654 SLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILA 707
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 229 (85.7 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 41/156 (26%), Positives = 74/156 (47%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S+ + ++F + + A SG I+LWD ++ H V FH F S
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G D +K+W+ + C+ T GH + ++F + W+VS +D +++W+ + +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
+ H + FHP E L+ + S D+TV+ WD+
Sbjct: 179 TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 216 (81.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 80/311 (25%), Positives = 133/311 (42%)
Query: 44 IDRFDEHDGPVRGVHF-HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH 102
+ F H V + KS + V+GG+D+K+ +W + +L GH I +V F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ + + TI++W+ + + LTGH + FHP + S SLD +++W
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 163 DI---GALRK-KTVSPADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGV 207
DI G + K + ++LR + + GG D +VK + H+ +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQI 188
Query: 208 NWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG-HMNNVSCVMFHAK-QDIIVS 265
FHP L+ +G+ DR VK W + ET +E+ G V C+ F+ + ++
Sbjct: 189 QSLDFHPHEFLLATGSADRTVKFWDL-ET--FELIGSGGPETAGVRCLSFNPDGKTVLCG 245
Query: 266 NSEDKSIRVWDVTK-RTGVQT-FRREHDRFWILASHPEMNLLAAGHDS---GMIVFKLER 320
E I W+ + GV + R D + H E LL ++ G+ V L R
Sbjct: 246 LQESLKIFSWEPIRCHDGVDVGWSRLSD----MNVH-EGKLLGCSYNQSCVGVWVVDLSR 300
Query: 321 ERPAFAVSGDS 331
P A GD+
Sbjct: 301 TEPCMA--GDT 309
Score = 163 (62.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 47/166 (28%), Positives = 68/166 (40%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASL-HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
L +F S V L K +L + + LW I H + V F
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
S+ L +G IK+W+ + + + TL GH +V FH + S S D ++IW
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+ + + CI GH V F P VVS D V+VWD+ A
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Score = 143 (55.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 45/181 (24%), Positives = 81/181 (44%)
Query: 8 KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV 67
+SN + + FH + + +++WD R I + H V + F V
Sbjct: 101 RSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRT 126
SGG+D +KVW+ + L H I+++ FH HE+ + + S D+T++ W+ ++
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDLETFE 218
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDI--LRLSQM 184
I V C SF+P + V L ++++++ +R D+ RLS M
Sbjct: 219 LIGSGGPETAGVRCLSFNP-DGKTVLCGLQESLKIFSWEPIR---CHDGVDVGWSRLSDM 274
Query: 185 N 185
N
Sbjct: 275 N 275
Score = 40 (19.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 468 CRAEDRVVIFDLQQRLVLGDL 488
C D VV+ D + VLG L
Sbjct: 321 CSGRDPVVLNDNNSKTVLGKL 341
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 215 (80.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 67/267 (25%), Positives = 128/267 (47%)
Query: 43 LIDRFDEHDGPVRGVHFHKSQPLFV-SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
L+ + H + V ++QP+ + + D+ +W+ + +CL GH+ + +++F
Sbjct: 148 LVKEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKF 207
Query: 102 HHEYPWIVSASDDQTIRIWNW--QSRTCISV------LTGHNHYVMCASFHPKEDLVVSA 153
H ++AS DQT IW + Q T V ++G + + C+ + D+
Sbjct: 208 HPSEQLALTASGDQTAHIWRYVVQLPTPQPVADTSQQISGEDE-IECSD-KDEPDIDGDV 265
Query: 154 SLD-QTVRVWDIGALRKK--TVSPADDILRLSQMNT-------DLFGGVDAVVKYVLEGH 203
S D TVRV + +L+ V AD ++ Q+ T +L+ + + + L GH
Sbjct: 266 SSDCPTVRV-PLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGH 324
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDII 263
D+ + HPT L+V+ + D +LW + V+ +GH + V+ +F D +
Sbjct: 325 DQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVG-DNV 383
Query: 264 VSNSEDKSIRVWDVTK-RTGVQTFRRE 289
VS S+D++++VWD+ R+ + T R +
Sbjct: 384 VSGSDDRTVKVWDLKNMRSPIATIRTD 410
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 65/261 (24%), Positives = 110/261 (42%)
Query: 90 LGHLDYIRTVQFHHEYPWIV-SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
+GH D I V P ++ +AS D T +W+ ++ C+ GH V FHP E
Sbjct: 153 IGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQ 212
Query: 149 LVVSASLDQTVRVWDIG---------ALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYV 199
L ++AS DQT +W A + +S D+I + D+ G V + V
Sbjct: 213 LALTASGDQTAHIWRYVVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTV 272
Query: 200 ------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
L+ H V A + +V+ + DR L+ + ++ V +L GH ++
Sbjct: 273 RVPLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSEL--VHSLTGHDQELTH 330
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKRT--GVQTFRREHDRFWILASHPEMNLLAAGHDS 311
H Q ++V++S D + R+WD + V F+ D N+++ D
Sbjct: 331 CCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDR 390
Query: 312 GMIVFKLERER-PAFAVSGDS 331
+ V+ L+ R P + DS
Sbjct: 391 TVKVWDLKNMRSPIATIRTDS 411
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 215 (80.7 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 66/256 (25%), Positives = 110/256 (42%)
Query: 36 WDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDY 95
W +R L+ H G VR + F SG D IK+W+ R TL GH+
Sbjct: 187 W-HRPWKLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHIST 245
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
+R + +P++ S ++D+ ++ W+ ++ I GH V + HP D++V+
Sbjct: 246 VRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGR 305
Query: 156 DQTVRVWDIGALRKKTV--SPADDILRLSQMNTD---LFGGVDAVVKY----------VL 200
D RVWD+ V + L D + G +D+ V+ VL
Sbjct: 306 DGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVL 365
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
H +GV A HPT SG+ +K W+ E A+ + GH N++ + Q
Sbjct: 366 THHKKGVRALATHPTEFTFASGSAG-SIKQWKCPEG-AF-MQNFEGH-NSIINTLSVNDQ 421
Query: 261 DIIVSNSEDKSIRVWD 276
++ S +++ S+ WD
Sbjct: 422 NVFFSGADNGSMSFWD 437
Score = 197 (74.4 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ L+ W + I++WD G L H VRG+ P S +
Sbjct: 204 VRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAE 263
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K W+ + ++ + GHL + T+ H +V+ D R+W+ ++R+ I VL
Sbjct: 264 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVL 323
Query: 132 TGHNHYV---MCASFHPKEDLVVSASLDQTVRVWDIGA 166
+GH V +C P+ V++ SLD TVR+WD+ A
Sbjct: 324 SGHTGTVSELVCQEADPQ---VITGSLDSTVRMWDLAA 358
Score = 184 (69.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/202 (29%), Positives = 97/202 (48%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI--LRLSQMN 185
V++GH +V + P S + D+T+++WD+ G LR + L +S +
Sbjct: 196 VISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRH 255
Query: 186 TDLFG-GVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
LF D +VK + LE GH GV A HPTL ++V+G D ++W M
Sbjct: 256 PYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMR 315
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT--KRTGVQTFRREHDR 292
T++ + L GH VS ++ +++ S D ++R+WD+ K GV T ++ R
Sbjct: 316 -TRS-NIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVR 373
Query: 293 FWILASHPEMNLLAAGHDSGMI 314
LA+HP A+G +G I
Sbjct: 374 --ALATHPTEFTFASG-SAGSI 392
Score = 170 (64.9 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 44/185 (23%), Positives = 81/185 (43%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+GL+ + P++ + +++ WD +I + H V + H + + V+GG
Sbjct: 246 VRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGR 305
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +VW+ + + L GH + + P +++ S D T+R+W+ + + VL
Sbjct: 306 DGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVL 365
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTDLF 189
T H V + HP E S S +++ W GA + I LS + ++F
Sbjct: 366 THHKKGVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVF 424
Query: 190 -GGVD 193
G D
Sbjct: 425 FSGAD 429
Score = 130 (50.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
V+ GH V A P SGA DR +K+W + + TL GH++ V +
Sbjct: 196 VISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRL--TLTGHISTVRGLAVSP 253
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI-VFK 317
+ + S +EDK ++ WD+ ++ + + LA HP +++L G G+ V+
Sbjct: 254 RHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWD 313
Query: 318 LERERPAFAVSG 329
+ +SG
Sbjct: 314 MRTRSNIHVLSG 325
Score = 53 (23.7 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLR--GHMNNVSCVM-- 255
EGH+ +N + + + SGAD+ + W ++ +DT G + S +
Sbjct: 407 EGHNSIINTLSVNDQ-NVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTS 465
Query: 256 -FHAKQDIIVSNSEDKSIRVW 275
F ++ DK+I++W
Sbjct: 466 TFDQSGSRLICGEADKTIKIW 486
Score = 41 (19.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
+ G+ + F + ++ G D+ +K+W+
Sbjct: 459 ESGIFTSTFDQSGSRLICGEADKTIKIWK 487
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLID-----RFDEHDGPVRG 56
L +E ++ + + + WI + +LW + G L D RF H G +
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWN-GELQDFEPFARFQGHAGAITA 432
Query: 57 VHFHKSQ--PLF-VSGGDDYKIKVW------NYKMHRCLFTLLGHLDYIRTVQFHHEYPW 107
+ KSQ P F V+G D IK W N + +T H I ++ +
Sbjct: 433 ISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEY 492
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+AS D+ ++W S I VL GH + +F+ + L+V+ S D+T++VW +
Sbjct: 493 FATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDF 552
Query: 168 R-KKTVSP-ADDILRLSQMNTD----LFGGVDAVVK 197
KKT+ + + R+ N + L G D ++K
Sbjct: 553 SCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIK 588
Score = 148 (57.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 30 SGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL 89
S +++++D G++I F + PV + LF GG D I VW+ + +L
Sbjct: 81 SQLLRIFDLNKGSVIKNF-KLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSL 139
Query: 90 LGHLDYIRTVQFHHEY---PWIVSASDDQ-TIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
GH I ++ FH E W +++ D T++IW+ R CI L HN V F
Sbjct: 140 KGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQ 199
Query: 146 KEDLVVSASLDQTVRVWD 163
DL +S D V +++
Sbjct: 200 DGDLFISGGRDNVVIIYN 217
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 49/228 (21%), Positives = 90/228 (39%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + V + WI +AS D R+W W + A F +
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGEL--------QDFEPFARFQGHAGAI 430
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
+ SL ++ K V+ + D+ + + +Y HD+ +N
Sbjct: 431 TAISLSKSQNE------PKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
P + + D+ K+W+ + + + L+GH + + F+ +IV+ S DK
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGET--IGVLKGHKRGLWDINFYKFDKLIVTGSGDK 542
Query: 271 SIRVW---DVTKRTGVQTFRREHDRF-WILASHPEMNLLAAGHDSGMI 314
+I+VW D + + ++ R + HP+ LL+ G D G+I
Sbjct: 543 TIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQ--LLSCGAD-GLI 587
Score = 125 (49.1 bits), Expect = 0.00054, P = 0.00054
Identities = 29/115 (25%), Positives = 50/115 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
HD + + + F + D KVW + L GH + + F+ IV
Sbjct: 477 HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIV 536
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWD 163
+ S D+TI++W+ +C L GH + V F +E ++S D +++WD
Sbjct: 537 TGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWD 591
Score = 123 (48.4 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 30/100 (30%), Positives = 53/100 (53%)
Query: 199 VLEGHDRGVNWAA-FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV-MF 256
VL+GH RG+ W F+ LIV+G+ D+ +K+W + + + TL GH N+V V F
Sbjct: 515 VLKGHKRGL-WDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKK--TLEGHTNSVQRVKFF 571
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
+ + ++S D I++WD + +++ R W +
Sbjct: 572 NREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAM 611
Score = 119 (46.9 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 15 LSFHSK---RPWILASLHS-GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
L+FH + + W LAS + G +++WD I +H+ VRGV F + LF+SGG
Sbjct: 149 LTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGG 208
Query: 71 DDYKIKVWNYKMHRCL--FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
D + ++N K + + F + ++ V + + + + ++IW+ +S
Sbjct: 209 RDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 49 (22.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 686 QGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVM 732
QG+AG + A +K+ FL +TG+ D K KI N ++
Sbjct: 424 QGHAGAIT-AISLSKSQNEPKFL--VTGSTDLTIKKWKIPNTPNSIV 467
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLID-----RFDEHDGPVRG 56
L +E ++ + + + WI + +LW + G L D RF H G +
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWN-GELQDFEPFARFQGHAGAITA 432
Query: 57 VHFHKSQ--PLF-VSGGDDYKIKVW------NYKMHRCLFTLLGHLDYIRTVQFHHEYPW 107
+ KSQ P F V+G D IK W N + +T H I ++ +
Sbjct: 433 ISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEY 492
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
+AS D+ ++W S I VL GH + +F+ + L+V+ S D+T++VW +
Sbjct: 493 FATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDF 552
Query: 168 R-KKTVSP-ADDILRLSQMNTD----LFGGVDAVVK 197
KKT+ + + R+ N + L G D ++K
Sbjct: 553 SCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIK 588
Score = 148 (57.2 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 30 SGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL 89
S +++++D G++I F + PV + LF GG D I VW+ + +L
Sbjct: 81 SQLLRIFDLNKGSVIKNF-KLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSL 139
Query: 90 LGHLDYIRTVQFHHEY---PWIVSASDDQ-TIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
GH I ++ FH E W +++ D T++IW+ R CI L HN V F
Sbjct: 140 KGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQ 199
Query: 146 KEDLVVSASLDQTVRVWD 163
DL +S D V +++
Sbjct: 200 DGDLFISGGRDNVVIIYN 217
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 49/228 (21%), Positives = 90/228 (39%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + V + WI +AS D R+W W + A F +
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGEL--------QDFEPFARFQGHAGAI 430
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
+ SL ++ K V+ + D+ + + +Y HD+ +N
Sbjct: 431 TAISLSKSQNE------PKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI 484
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
P + + D+ K+W+ + + + L+GH + + F+ +IV+ S DK
Sbjct: 485 DVSPNDEYFATASYDKLGKVWQTDSGET--IGVLKGHKRGLWDINFYKFDKLIVTGSGDK 542
Query: 271 SIRVW---DVTKRTGVQTFRREHDRF-WILASHPEMNLLAAGHDSGMI 314
+I+VW D + + ++ R + HP+ LL+ G D G+I
Sbjct: 543 TIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQ--LLSCGAD-GLI 587
Score = 125 (49.1 bits), Expect = 0.00054, P = 0.00054
Identities = 29/115 (25%), Positives = 50/115 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
HD + + + F + D KVW + L GH + + F+ IV
Sbjct: 477 HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIV 536
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWD 163
+ S D+TI++W+ +C L GH + V F +E ++S D +++WD
Sbjct: 537 TGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWD 591
Score = 123 (48.4 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 30/100 (30%), Positives = 53/100 (53%)
Query: 199 VLEGHDRGVNWAA-FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV-MF 256
VL+GH RG+ W F+ LIV+G+ D+ +K+W + + + TL GH N+V V F
Sbjct: 515 VLKGHKRGL-WDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKK--TLEGHTNSVQRVKFF 571
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
+ + ++S D I++WD + +++ R W +
Sbjct: 572 NREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAM 611
Score = 119 (46.9 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 15 LSFHSK---RPWILASLHS-GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
L+FH + + W LAS + G +++WD I +H+ VRGV F + LF+SGG
Sbjct: 149 LTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGG 208
Query: 71 DDYKIKVWNYKMHRCL--FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
D + ++N K + + F + ++ V + + + + ++IW+ +S
Sbjct: 209 RDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKS 264
Score = 49 (22.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 686 QGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVM 732
QG+AG + A +K+ FL +TG+ D K KI N ++
Sbjct: 424 QGHAGAIT-AISLSKSQNEPKFL--VTGSTDLTIKKWKIPNTPNSIV 467
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 206 (77.6 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 39/158 (24%), Positives = 80/158 (50%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
+T+ + +++ ++ + G+I ++D G L+ + H P+R + F L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ +V F + VS+S D++I++W+ SR
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSR 264
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+C++ H V ++P +VSA D+ + ++D
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 196 (74.1 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 67 VSGGDDYKIKVWNYKMHRC--LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
V+G D +KVW + + +TL GH + +V S+S D IR+W+ ++
Sbjct: 36 VTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLET 95
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV--SPADDILRLS 182
I + +F P + + S V ++ + + +K+ + IL ++
Sbjct: 96 GKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIA 155
Query: 183 QMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
+ G +D ++ + LEGH + F P L+V+ +DD +K
Sbjct: 156 YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 215
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRRE 289
++ + TL GH + V V F VS+S DKSI+VWD + R+ V TF
Sbjct: 216 IYDVQHANL--AGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDH 273
Query: 290 HDRFWILASHPE-MNLLAAGHDSGMIVF 316
D+ W + +P +++AG D + ++
Sbjct: 274 QDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
++F +I H G + ++ G D + + + SG D
Sbjct: 112 VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
I +++ + L TL GH IR++ F + +V+ASDD I+I++ Q L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+V+ +F P + VS+S D++++VWD
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWD 260
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L E + ++ L+F ++ + G I+++D + L H V V F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFS 241
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
FVS D IKVW+ C+ T H D + +V+++ IVSA DD+ I I+
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 51/243 (20%), Positives = 102/243 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL-LGHLDYIRTVQFHHEYPWI 108
H V V+ ++ + S D I++W+ + + + ++ G +D TV F + +I
Sbjct: 63 HQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVD-AWTVAFSPDSKYI 121
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-- 166
+ S + I+ +S L +++ ++ P + S ++D + ++DI
Sbjct: 122 ATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 167 -----------LRKKTVSPADDILRLSQMN--TDLFGGVDAVVKYVLEGHDRGVNWAAFH 213
+R T SP +L + + ++ A + L GH V AF
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFS 241
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR 273
P VS + D+ +K+W + V+T H + V V ++ IVS +D++I
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSC--VNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIH 299
Query: 274 VWD 276
++D
Sbjct: 300 IYD 302
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 214 (80.4 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 71/297 (23%), Positives = 128/297 (43%)
Query: 40 MGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTV 99
+ T++ F H + V QP+ + D+ +W + RCL GH + ++
Sbjct: 149 VSTVVREFGGHKDGIWQVAAKAGQPIIGTASADHTACIWGVESARCLLQYQGHAGSVNSI 208
Query: 100 QFHHEYPWIVSASDDQTIRIW----NWQ----SRTCISVLTGHNHYVMCASFHPKEDLVV 151
+FH + +++ S D T IW NW+ + L + V + D +
Sbjct: 209 KFHQQRDLVLTGSGDGTAHIWQAAVNWEVPKKGHSSEEELDDSDEQV---EDRDRVDTLR 265
Query: 152 SASLDQTVRVWDIGAL-RKKTVSPADDILRLSQMNTDLFGGVDAVVKYV-LEGHDRGVNW 209
+ + T + + +S D I+ S T + V+ + L GHD +
Sbjct: 266 TPLCEFTGPGGHLSVVVAADWLSSMDQIITGSWDRTAILWDVETGLPLQPLTGHDHELTH 325
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
+ HPT L+V+ + D +LW E V +GH V+ +F A+ D +VS S+D
Sbjct: 326 VSAHPTQRLVVTASRDTTFRLWDFREAIP-AVSVFQGHTETVTSSVF-ARDDKVVSGSDD 383
Query: 270 KSIRVWDVTK-RTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI-VFKLERERPA 324
++I+VW++ R+ + T R + + S ++A HD+ I +F L +R A
Sbjct: 384 RTIKVWELRNMRSALATIRTDSSVNRLAVSTG--GIIAIPHDNRQIRLFDLNGQRVA 438
Score = 179 (68.1 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 69/251 (27%), Positives = 109/251 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D I V P I +AS D T IW +S C+ GH V FH + DLV
Sbjct: 158 GHKDGIWQVAAKAGQPIIGTASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLV 217
Query: 151 VSASLDQTVRVWDIGA---LRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLE-----G 202
++ S D T +W + KK S +++ + D VD + + E G
Sbjct: 218 LTGSGDGTAHIWQAAVNWEVPKKGHSSEEELDDSDEQVEDR-DRVDTLRTPLCEFTGPGG 276
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
H V A + ++ I++G+ DR LW + ET + L GH + ++ V H Q +
Sbjct: 277 HLSVVVAADWLSSMDQIITGSWDRTAILWDV-ET-GLPLQPLTGHDHELTHVSAHPTQRL 334
Query: 263 IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI-VFKLERE 321
+V+ S D + R+WD + + + H + + + +G D I V++L
Sbjct: 335 VVTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFARDDKVVSGSDDRTIKVWELRNM 394
Query: 322 RPAFA-VSGDS 331
R A A + DS
Sbjct: 395 RSALATIRTDS 405
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 69/282 (24%), Positives = 120/282 (42%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L +++ + V + FH +R +L G +W + + P +G H
Sbjct: 195 LLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAHIWQAAVNWEV--------PKKG---HS 243
Query: 62 SQPLFVSGGDDY--KIKVWNYKMHRCLFTLLG-HLDYIRTVQFHHEYPWIVSASDDQTIR 118
S+ + + +V + C FT G HL + + I++ S D+T
Sbjct: 244 SEEELDDSDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITGSWDRTAI 303
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG-ALRKKTVSPAD- 176
+W+ ++ + LTGH+H + S HP + LVV+AS D T R+WD A+ +V
Sbjct: 304 LWDVETGLPLQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFREAIPAVSVFQGHT 363
Query: 177 DILRLSQMNTD---LFGGVDAVVK-YVLEGH---------DRGVNWAAFHPTLPLIVSGA 223
+ + S D + G D +K + L D VN A T +I
Sbjct: 364 ETVTSSVFARDDKVVSGSDDRTIKVWELRNMRSALATIRTDSSVNRLAVS-TGGIIAIPH 422
Query: 224 DDRQVKLWRMNETKAWEVD-TLR-GHMNNVSCVMFHAKQDII 263
D+RQ++L+ +N + + T R GH VS V + A++ ++
Sbjct: 423 DNRQIRLFDLNGQRVARLPRTSRQGHRRMVSSVAW-AEEPLL 463
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 214 (80.4 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 67/256 (26%), Positives = 118/256 (46%)
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
S D ++W+ K+ +CL + GH + + V++ I ++S D+T+++W
Sbjct: 226 SASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGA-GLIYTSSKDRTVKMWRAADGIL 284
Query: 128 ISVLTGHNH----------YVM-CASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP-- 174
+GH H YV+ FHP +D S T + + R + V P
Sbjct: 285 CRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDE 344
Query: 175 ADDILRLSQMNTDLFGGVDAVVKYV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 232
+ ++ S NT L+ + K V + GH VN + P + LI S + D+ V+LWR
Sbjct: 345 VESLVSCSDDNT-LYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWR 403
Query: 233 MNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
++ + + T RGH+ V V + A +IVS S+D +++VW V + Q D
Sbjct: 404 ASDGQY--MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADE 461
Query: 293 FWILASHPEMNLLAAG 308
+ + P+ + +A+G
Sbjct: 462 VFGVDWAPDGSRVASG 477
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 70/267 (26%), Positives = 123/267 (46%)
Query: 89 LLGHLDYIRTVQF--HHEYPW---IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
L GH +I + + +H P + SAS D RIW+ + C+ + GH + V +
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW 259
Query: 144 HPKEDLVVSASLDQTVRVWDIG-ALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVL 200
L+ ++S D+TV++W + +T S + ++TD L G VK
Sbjct: 260 GGA-GLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRS 318
Query: 201 EGH---------DRGVN-WAAFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
+ H + + + A P + +VS +DD + LWR N+ K V+ + GH N
Sbjct: 319 KSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKC--VERMTGHQN 376
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH 309
V+ V + +I S S DKS+R+W + + TFR + +A + L+ +G
Sbjct: 377 VVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGS 436
Query: 310 -DSGMIVFKLERERPAFAVSG--DSLF 333
DS + V+ ++ ++ A + G D +F
Sbjct: 437 KDSTLKVWSVQTKKLAQELPGHADEVF 463
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ LW ++R H V V + L S D +++W + + T GH
Sbjct: 357 LYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGH 416
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+ + TV + + IVS S D T+++W+ Q++ L GH V + P V S
Sbjct: 417 VQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVAS 476
Query: 153 ASLDQTVRVW 162
D+ +++W
Sbjct: 477 GGKDKVIKLW 486
Score = 149 (57.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS DD + +W ++C+ + GH + + V++ + I SAS D+++R+W
Sbjct: 349 VSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ 408
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA--LRKKTVSPADDILRLSQM 184
++ GH V ++ L+VS S D T++VW + L ++ AD++ +
Sbjct: 409 YMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWA 468
Query: 185 ---NTDLFGGVDAVVK 197
+ GG D V+K
Sbjct: 469 PDGSRVASGGKDKVIK 484
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/142 (28%), Positives = 62/142 (43%)
Query: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG-- 165
+VS SDD T+ +W C+ +TGH + V + P L+ SAS D++VR+W
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 166 ---ALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY----------VLEGH-DR--GVNW 209
A + V + + + G D+ +K L GH D GV+W
Sbjct: 408 QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDW 467
Query: 210 AAFHPTLPLIVSGADDRQVKLW 231
A P + SG D+ +KLW
Sbjct: 468 A---PDGSRVASGGKDKVIKLW 486
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 207 (77.9 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 48/170 (28%), Positives = 82/170 (48%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ S+ V+ ++ + + L++ ++LWD G RF H G V V K+
Sbjct: 62 FKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLR 121
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH--HEYPWIVSASDDQTIRIWNW 122
VS D +KVWN + C+ TL GH D++ V+ + ++SAS D+T++ W+
Sbjct: 122 QIVSASRDKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDL 180
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
+ + GH Y+ C + P L SA D + +WD+ + KT+
Sbjct: 181 ADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLN--KNKTL 228
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/217 (27%), Positives = 94/217 (43%)
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNTD 187
GH+H V + +SAS D+T+R+WD+ G ++ V D+L +S +
Sbjct: 64 GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQI 123
Query: 188 LFGGVDAVVKY---------VLEGHDRGVNWAAFHPT--LPLIVSGADDRQVKLWRMNET 236
+ D VK L GH+ V+ P+ ++S + D+ VK W + +
Sbjct: 124 VSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADY 183
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
D + GH +SC+ + S +D I +WD+ K + T + + L
Sbjct: 184 SV-NADFI-GHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHAL 240
Query: 297 ASHPEMNLLAAGHDSGMIVFKL-ERE-----RPAFAV 327
A P LAA SG+ +FKL ER +P FAV
Sbjct: 241 AFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAV 277
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 57/226 (25%), Positives = 93/226 (41%)
Query: 37 DYRMGTLIDRFDEHDGPVRGVHFHKSQP-LFVSGGDDYKIKVWN--------YKMHRCLF 87
D + L + H+G V + + P L +SG D + W Y + + F
Sbjct: 3 DQEVLVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSF 62
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
GH ++ V + + +SAS D+T+R+W+ ++ GH V+ S
Sbjct: 63 K--GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 148 DLVVSASLDQTVRVWD-IGALRKKTVSPADDI--LRLS---QMNTDLFGGVDAVVK---- 197
+VSAS D+TV+VW+ IG D + +R+S Q +T + D VK
Sbjct: 121 RQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDL 180
Query: 198 --YVLE----GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
Y + GH ++ P L S D + LW +N+ K
Sbjct: 181 ADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNK 226
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 207 (77.9 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 48/170 (28%), Positives = 82/170 (48%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ S+ V+ ++ + + L++ ++LWD G RF H G V V K+
Sbjct: 62 FKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLR 121
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFH--HEYPWIVSASDDQTIRIWNW 122
VS D +KVWN + C+ TL GH D++ V+ + ++SAS D+T++ W+
Sbjct: 122 QIVSASRDKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDL 180
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
+ + GH Y+ C + P L SA D + +WD+ + KT+
Sbjct: 181 ADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLN--KNKTL 228
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/217 (27%), Positives = 94/217 (43%)
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNTD 187
GH+H V + +SAS D+T+R+WD+ G ++ V D+L +S +
Sbjct: 64 GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQI 123
Query: 188 LFGGVDAVVKY---------VLEGHDRGVNWAAFHPT--LPLIVSGADDRQVKLWRMNET 236
+ D VK L GH+ V+ P+ ++S + D+ VK W + +
Sbjct: 124 VSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADY 183
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
D + GH +SC+ + S +D I +WD+ K + T + + L
Sbjct: 184 SV-NADFI-GHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHAL 240
Query: 297 ASHPEMNLLAAGHDSGMIVFKL-ERE-----RPAFAV 327
A P LAA SG+ +FKL ER +P FAV
Sbjct: 241 AFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAV 277
Score = 128 (50.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 57/226 (25%), Positives = 93/226 (41%)
Query: 37 DYRMGTLIDRFDEHDGPVRGVHFHKSQP-LFVSGGDDYKIKVWN--------YKMHRCLF 87
D + L + H+G V + + P L +SG D + W Y + + F
Sbjct: 3 DQEVLVLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSF 62
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
GH ++ V + + +SAS D+T+R+W+ ++ GH V+ S
Sbjct: 63 K--GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 148 DLVVSASLDQTVRVWD-IGALRKKTVSPADDI--LRLS---QMNTDLFGGVDAVVK---- 197
+VSAS D+TV+VW+ IG D + +R+S Q +T + D VK
Sbjct: 121 RQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDL 180
Query: 198 --YVLE----GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
Y + GH ++ P L S D + LW +N+ K
Sbjct: 181 ADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNK 226
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 181 (68.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G ++LWD R I F ++ V V F+ + +SGG D IKVW+ + ++ +T+
Sbjct: 175 GTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ----SRTCISVLTG--HN---HYVMCA 141
GH D + + E +++S + D T+R+W+ + C+ + G HN + + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 142 SFHPKEDLVVSASLDQTVRVWDIGALR 168
S+ P + + S D+ V VWD + R
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRR 319
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASF 143
+ L GH + +FH + SA D+ I +WN C + L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRL--SQMNTDLF--GGVDAVVK 197
+ ++ SAS D+TV VWD G K+ + ++ L G D VK
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 198 Y-------VLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
++ A F+ T I+SG D +K+W + + K T+RGH
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA 236
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
++V+ + ++ ++SN+ D ++RVWDV
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 164 (62.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H+G V FH + S G D I +WN Y TL GH + + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYV-MCASFHPKEDLVVSASLDQTVRVWDIGAL 167
SAS D+T+ +W+ ++ + L GH +V C LV + S D TV++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 182
Query: 168 RKK----TVSPADDILRLSQMNTD---LFGGVDAVVK----------YVLEGHDRGVNWA 210
RKK T +L ++ +T + GG+D +K Y + GH V
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 211 AFHPTLPLIVSGADDRQVKLW 231
+ ++S A D V++W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
Score = 148 (57.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV- 67
S V L +++ + ++ + +WD G + R H V + + P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G DD +K+W+ + + T + V F+ I+S D I++W+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ GH V S + ++S ++D TVRVWD+ + +P + +++ Q N
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV-----RPFAPKERCVKIFQGNVH 283
Query: 188 LF 189
F
Sbjct: 284 NF 285
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/144 (22%), Positives = 71/144 (49%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+++G D L+GH V ++ ++ S + D+ V +W +ET V L+G
Sbjct: 95 NVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGE-RVKRLKG 150
Query: 247 HMNNV-SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLL 305
H + V SC ++ + S+D ++++WD+ K+ +QTF+ + + + ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 210
Query: 306 AAGHDSGMIVFKLERERPAFAVSG 329
+ G D+ + V+ L + + + + G
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRG 234
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V ++F+ I++ I++WD R L H V G+ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----MHRCLFTLLGHL-DYIRTV---QFHHEYPWIVSASDDQTIRIWNW 122
D ++VW+ + RC+ G++ ++ + + + + I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SR + L GH + +FHP E +++SAS D+ + + +I
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 77 (32.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
I +G+ DR V +W + T + L GH +++ V FH + II+S S DK + + ++
Sbjct: 301 IAAGSADRFVYVW--DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 75 (31.5 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ Y L GH +N AFHP P+I+S + D+++
Sbjct: 320 ILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 181 (68.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G ++LWD R I F ++ V V F+ + +SGG D IKVW+ + ++ +T+
Sbjct: 175 GTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ----SRTCISVLTG--HN---HYVMCA 141
GH D + + E +++S + D T+R+W+ + C+ + G HN + + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 142 SFHPKEDLVVSASLDQTVRVWDIGALR 168
S+ P + + S D+ V VWD + R
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRR 319
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASF 143
+ L GH + +FH + SA D+ I +WN C + L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRL--SQMNTDLF--GGVDAVVK 197
+ ++ SAS D+TV VWD G K+ + ++ L G D VK
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 198 Y-------VLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
++ A F+ T I+SG D +K+W + + K T+RGH
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA 236
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
++V+ + ++ ++SN+ D ++RVWDV
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 164 (62.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H+G V FH + S G D I +WN Y TL GH + + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYV-MCASFHPKEDLVVSASLDQTVRVWDIGAL 167
SAS D+T+ +W+ ++ + L GH +V C LV + S D TV++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 182
Query: 168 RKK----TVSPADDILRLSQMNTD---LFGGVDAVVK----------YVLEGHDRGVNWA 210
RKK T +L ++ +T + GG+D +K Y + GH V
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 211 AFHPTLPLIVSGADDRQVKLW 231
+ ++S A D V++W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
Score = 148 (57.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV- 67
S V L +++ + ++ + +WD G + R H V + + P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G DD +K+W+ + + T + V F+ I+S D I++W+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ GH V S + ++S ++D TVRVWD+ + +P + +++ Q N
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV-----RPFAPKERCVKIFQGNVH 283
Query: 188 LF 189
F
Sbjct: 284 NF 285
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/144 (22%), Positives = 71/144 (49%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+++G D L+GH V ++ ++ S + D+ V +W +ET V L+G
Sbjct: 95 NVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGE-RVKRLKG 150
Query: 247 HMNNV-SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLL 305
H + V SC ++ + S+D ++++WD+ K+ +QTF+ + + + ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 210
Query: 306 AAGHDSGMIVFKLERERPAFAVSG 329
+ G D+ + V+ L + + + + G
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRG 234
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V ++F+ I++ I++WD R L H V G+ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----MHRCLFTLLGHL-DYIRTV---QFHHEYPWIVSASDDQTIRIWNW 122
D ++VW+ + RC+ G++ ++ + + + + I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SR + L GH + +FHP E +++SAS D+ + + +I
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 77 (32.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
I +G+ DR V +W + T + L GH +++ V FH + II+S S DK + + ++
Sbjct: 301 IAAGSADRFVYVW--DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 75 (31.5 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ Y L GH +N AFHP P+I+S + D+++
Sbjct: 320 ILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 180 (68.4 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 41/147 (27%), Positives = 74/147 (50%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G ++LWD R + F ++ V V F+ + +SGG D IKVW+ + ++ +T+
Sbjct: 175 GTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ----SRTCISVLTG--HN---HYVMCA 141
GH D + + E +++S + D T+R+W+ + C+ + G HN + + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 292
Query: 142 SFHPKEDLVVSASLDQTVRVWDIGALR 168
S+ P + + S D+ V VWD + R
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRR 319
Score = 166 (63.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASF 143
+ L GH + +FH + SA D+ I +WN C + L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRL--SQMNTDLF--GGVDAVVK 197
+ ++ SAS D+TV VWD G K+ + ++ L G D VK
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 198 Y-------VLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
++ A F+ T I+SG D +K+W + + K T+RGH
Sbjct: 179 LWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA 236
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
++V+ + ++ ++SN+ D ++RVWDV
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 164 (62.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H+G V FH + S G D I +WN Y TL GH + + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYV-MCASFHPKEDLVVSASLDQTVRVWDIGAL 167
SAS D+T+ +W+ ++ + L GH +V C LV + S D TV++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 182
Query: 168 RKK----TVSPADDILRLSQMNTD---LFGGVDAVVK----------YVLEGHDRGVNWA 210
RKK T +L ++ +T + GG+D +K Y + GH V
Sbjct: 183 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 211 AFHPTLPLIVSGADDRQVKLW 231
+ ++S A D V++W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
Score = 147 (56.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV- 67
S V L +++ + ++ + +WD G + R H V + + P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G DD +K+W+ + + T + V F+ I+S D I++W+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAAVQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ GH V S + ++S ++D TVRVWD+ + +P + +++ Q N
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV-----RPFAPKERCVKIFQGNVH 283
Query: 188 LF 189
F
Sbjct: 284 NF 285
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/144 (22%), Positives = 71/144 (49%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+++G D L+GH V ++ ++ S + D+ V +W +ET V L+G
Sbjct: 95 NVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGE-RVKRLKG 150
Query: 247 HMNNV-SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLL 305
H + V SC ++ + S+D ++++WD+ K+ VQTF+ + + + ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQII 210
Query: 306 AAGHDSGMIVFKLERERPAFAVSG 329
+ G D+ + V+ L + + + + G
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRG 234
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V ++F+ I++ I++WD R L H V G+ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----MHRCLFTLLGHL-DYIRTV---QFHHEYPWIVSASDDQTIRIWNW 122
D ++VW+ + RC+ G++ ++ + + + + I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SR + L GH + +FHP E +++SAS D+ + + +I
Sbjct: 316 TSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 78 (32.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
I +G+ DR V +W + T + L GH +++ V FH + II+S S DK + + ++
Sbjct: 301 IAAGSADRFVYVW--DTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 76 (31.8 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
V Y L GH +N AFHP P+I+S + D+++
Sbjct: 320 VLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 204 (76.9 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 50/169 (29%), Positives = 77/169 (45%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLI--------DRFDEHDGPVR 55
KF K N+ + + F ++L G I++WDY G L D F HD +
Sbjct: 221 KFNNK-NKPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAIL 279
Query: 56 GVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL-GHLDYIRTVQFHHEYPWIVSASDD 114
+ F K +G D KIKVW K +CL H + + +QF I+S S D
Sbjct: 280 CIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFD 339
Query: 115 QTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+++I +S + + GH +V F+ ED V+S S D +++WD
Sbjct: 340 SSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWD 388
Score = 134 (52.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 26/101 (25%), Positives = 50/101 (49%)
Query: 33 IQLWDYRMGTLIDRFDE-HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
I++W + G + +F+ H V + F ++ +SG D +K+ K + L G
Sbjct: 299 IKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIFRG 358
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT 132
H ++ F+H+ ++S S D I+IW+ +S C+ +T
Sbjct: 359 HQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTIT 399
Score = 58 (25.5 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
HD+ V + HPT L+ + D +K+W+ N
Sbjct: 492 HDQEVISISHHPTKNLLATTGSDCLLKIWKSN 523
Score = 52 (23.4 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI-LASHPEMNLLAA-GHDSGMIVFK 317
Q+ + + ED + +D + + F+ HD+ I ++ HP NLLA G D + ++K
Sbjct: 463 QNYLYAVDEDNILYTFDFNSGSLLNKFKI-HDQEVISISHHPTKNLLATTGSDCLLKIWK 521
Score = 39 (18.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 5/29 (17%), Positives = 14/29 (48%)
Query: 247 HMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
H V + H ++++ + D +++W
Sbjct: 492 HDQEVISISHHPTKNLLATTGSDCLLKIW 520
>DICTYBASE|DDB_G0277533 [details] [associations]
symbol:DDB_G0277533 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277533 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000020 KO:K15361
InterPro:IPR021772 Pfam:PF11816 RefSeq:XP_642597.1
ProteinModelPortal:Q54ZP5 EnsemblProtists:DDB0237514 GeneID:8621014
KEGG:ddi:DDB_G0277533 InParanoid:Q54ZP5 Uniprot:Q54ZP5
Length = 1172
Score = 146 (56.5 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 67 VSGGD-DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
+ GGD D I N + + H D++ + F ++ +VS S D TI+IWN S
Sbjct: 183 IGGGDNDNDINEKNEYGFKFKKSFNDHTDWVNDL-FFNDSNILVSCSSDSTIKIWNTDSE 241
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
C++ L H+ YV ++ PK + S+ LD +++WD+
Sbjct: 242 RCVNSLKFHDDYVKVLAYAPKANYFASSGLDSHIKIWDL 280
Score = 128 (50.1 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 26/97 (26%), Positives = 53/97 (54%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
+VSG+ +R ++ W + + ++ L+GH +N+ ++ + +S S D ++R+WD+
Sbjct: 577 VVSGSTERAIRGWDVRSGQ--KIFKLKGHTDNIRSILLNDNSTRCLSASSDGTVRLWDIG 634
Query: 279 KRTGVQTFRREH-DRFWILASHPEMNLLAAGHDSGMI 314
++ +Q F H D W LA++ + +G GMI
Sbjct: 635 EQRCIQVFDDLHTDSVWTLATNDSFSHFFSGGRDGMI 671
Score = 116 (45.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VSG + I+ W+ + + +F L GH D IR++ + +SAS D T+R+W+ +
Sbjct: 578 VSGSTERAIRGWDVRSGQKIFKLKGHTDNIRSILLNDNSTRCLSASSDGTVRLWDIGEQR 637
Query: 127 CISVLTG-HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADD-ILRLSQM 184
CI V H V + + S D + + D+ + + VS ++ IL++
Sbjct: 638 CIQVFDDLHTDSVWTLATNDSFSHFFSGGRDGMIFLTDLKTHQSRLVSRENEPILKILNN 697
Query: 185 NTD 187
D
Sbjct: 698 QDD 700
Score = 109 (43.4 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F++H V + F+ S + VS D IK+WN RC+ +L H DY++ + + +
Sbjct: 206 FNDHTDWVNDLFFNDSN-ILVSCSSDSTIKIWNTDSERCVNSLKFHDDYVKVLAYAPKAN 264
Query: 107 WIVSASDDQTIRIWN 121
+ S+ D I+IW+
Sbjct: 265 YFASSGLDSHIKIWD 279
Score = 103 (41.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
++VS S ++ IR W+ +S I L GH + + +SAS D TVR+WDIG
Sbjct: 576 FVVSGSTERAIRGWDVRSGQKIFKLKGHTDNIRSILLNDNSTRCLSASSDGTVRLWDIG- 634
Query: 167 LRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
++ + DD L + T D+ + G D + +VS ++
Sbjct: 635 -EQRCIQVFDD-LHTDSVWT--LATNDSFSHFFSGGRDGMIFLTDLKTHQSRLVSRENEP 690
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS 267
+K+ + ++ V T + N F+ K I +N+
Sbjct: 691 ILKILNNQDDQSIWVSTTSSTIKNYGLSNFYDKNQSIDNNT 731
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHS-GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
F ++ V L F+ IL S S I++W+ ++ HD V+ + +
Sbjct: 206 FNDHTDWVNDLFFNDSN--ILVSCSSDSTIKIWNTDSERCVNSLKFHDDYVKVLAYAPKA 263
Query: 64 PLFVSGGDDYKIKVWN 79
F S G D IK+W+
Sbjct: 264 NYFASSGLDSHIKIWD 279
Score = 40 (19.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 17/88 (19%), Positives = 35/88 (39%)
Query: 540 NGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKV---SGNTIFCLDRDGKNRAIVIDA 596
+ V+ T + + G G+I D+ + +++ I + + +++I +
Sbjct: 648 DSVWTLATNDSFSHFFSGGRDGMIFLTDLKTHQSRLVSRENEPILKILNNQDDQSIWVST 707
Query: 597 TEYIFKLSLLRKRYDHVMSMIRNSQLCG 624
T K L YD S+ N+ CG
Sbjct: 708 TSSTIKNYGLSNFYDKNQSIDNNTTNCG 735
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 144 (55.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV + L +G D +K+W C +L H D + +QF +
Sbjct: 590 HKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFF 649
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+A D I+ W+ I L GH+ + C + P D VVS+S D+++R+W+
Sbjct: 650 TAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 142 (55.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGALR--------KKTVSPAD---DILRLSQMNT 186
V+C S+ P + L+ + LD TV+++ + L+ K V D D ++ +
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSA 611
Query: 187 DL---FGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
D G+D L HD V + F P L + D ++K W + K +
Sbjct: 612 DRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQW--DADKFEHIQ 669
Query: 243 TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
TL GH + C+ D +VS+S DKS+R+W+ T+ + RE +R
Sbjct: 670 TLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLILEEEREMER 719
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/191 (25%), Positives = 84/191 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++ +G +QL+D G L++ D HDG + + Q FV+GG D +K W++++
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELV 528
Query: 84 RCLFTLLGHLDY--IRTVQFHHEYPWIVSASDDQ----------TIRIWNWQSRTCISVL 131
+ + L RT+Q + VS S +Q T++I+ + L
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEDV-LCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDL 188
GH V+C L+ + S D+ V++W D G K + D ++ L + + L
Sbjct: 588 YGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHL 647
Query: 189 F--GGVDAVVK 197
F G D +K
Sbjct: 648 FFTAGKDHKIK 658
Score = 137 (53.3 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I+++ G F+ H + + + + SG D I VW+ L+ L
Sbjct: 87 GSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLK 146
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D I F E +V++ D ++ W+ ++ C + GH V +E +
Sbjct: 147 GHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRL 206
Query: 151 VSASLDQTVRVWDIGALRK 169
++ + D +RVWDI L++
Sbjct: 207 ITGASDSELRVWDIAYLQE 225
Score = 135 (52.6 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 47/193 (24%), Positives = 84/193 (43%)
Query: 173 SPADDILRLSQMN-TDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L +S ++ T VD + ++ L GH V LI +G+ DR VK+
Sbjct: 558 SPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKI 617
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W ++ + +L H ++V + F K + + +D I+ WD K +QT H
Sbjct: 618 WGLDFGDCHK--SLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHH 675
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQK 349
W LA P + ++++ HD + +++ RE P + +R Y E ++
Sbjct: 676 QEIWCLAVSPSGDYVVSSSHDKSLRLWERTRE-PLILEEEREM----EREAEYEESVAKE 730
Query: 350 DTQVIPIRRPGST 362
D +P G +
Sbjct: 731 DQPAVPGETQGDS 743
Score = 110 (43.8 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
T+ GH +RT+ F + ++SA+ D +I+IWN + CI +T Y +C+ F P +
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMTCE--YALCSFFVPGD 466
Query: 148 DLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVDAVVKY 198
VV + ++++D+ + +T+ D L ++ D + GG D VK+
Sbjct: 467 RQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKF 522
Score = 90 (36.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G +D I++++ T GH I T+++ + S S D I +W+ + + +
Sbjct: 83 GYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGL 142
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH + A F +++L+V++ D V+ WD+
Sbjct: 143 YRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDL 178
Score = 81 (33.6 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 24/114 (21%), Positives = 47/114 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR + F +S D IK+WN +C+ T+ +Y F +V
Sbjct: 414 HRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQVV 470
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ +++++ S + + H+ + S P + V+ D++V+ WD
Sbjct: 471 IGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWD 524
Score = 44 (20.5 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 11/63 (17%), Positives = 26/63 (41%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
F ++ ++ S +++ WD H V G+ + ++G D +++
Sbjct: 157 FLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELR 216
Query: 77 VWN 79
VW+
Sbjct: 217 VWD 219
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 204 (76.9 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 65/260 (25%), Positives = 118/260 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
I+LW+ G LI + H VR VH F S G D ++ W+ R + GH
Sbjct: 42 IRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGH 101
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASFHPKEDLV 150
+ V+F+ +VSA D+++R+W+ +S + + ++ VM E +
Sbjct: 102 DGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--I 159
Query: 151 VSASLDQTVRVWDIGALRKKTVS---PADDILRLSQMNTDLFGGVDAVVKY--------- 198
+ S+D TVR +D+ R+ + + P + I + N L G +D+ ++
Sbjct: 160 IGGSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELL 219
Query: 199 -VLEGH-DRGVNW-AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
V +GH + + ++ G++D V W + + K + R H V+ V
Sbjct: 220 QVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKV--LSKFRAHDLVVTSVS 277
Query: 256 FHAKQDIIVSNSEDKSIRVW 275
+H K+D ++++S D +IRVW
Sbjct: 278 YHPKEDCMLTSSVDGTIRVW 297
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 67/289 (23%), Positives = 121/289 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H+G V F+ ++ G D I++WN + T H +R V +
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFC 76
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S D+ + W+ + I GH+ V F+ +VVSA D+++RVWD R
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC---RS 133
Query: 170 KTVSPA-------DDILRLSQMNTDLFGG-VDAVVK-YVLE-GHDRG------VNWAAFH 213
+V P D ++ + T++ GG VD V+ + + G + VN +
Sbjct: 134 HSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVNCISIS 193
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN---VSCVMFHAKQDIIVSNSEDK 270
+++G D ++L ++ T + +GH++ C + ++ +I SED
Sbjct: 194 NDGNCVLAGCLDSTLRL--LDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVI-GGSEDG 250
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILAS-HPEMN-LLAAGHDSGMIVFK 317
+ WD+ + FR HD S HP+ + +L + D + V+K
Sbjct: 251 LVFFWDLVDAKVLSKFRA-HDLVVTSVSYHPKEDCMLTSSVDGTIRVWK 298
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 180 (68.4 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G ++LWD R I F ++ V V F+ + +SGG D IKVW+ + ++ +T+
Sbjct: 175 GTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 233
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ----SRTCISVLTG--HN---HYVMCA 141
GH D + + E +++S + D T+R+W+ + C+ + G HN + + C
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC- 292
Query: 142 SFHPKEDLVVSASLDQTVRVWDIGALR 168
S+ P + + S D+ V VWD + R
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRR 319
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASF 143
+ L GH + +FH + SA D+ I +WN C + L GH+ VM +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 118
Query: 144 HPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRL--SQMNTDLF--GGVDAVVK 197
+ ++ SAS D+TV VWD G K+ + ++ L G D VK
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 198 Y-------VLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
++ A F+ T I+SG D +K+W + + K T+RGH
Sbjct: 179 LWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA 236
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
++V+ + ++ ++SN+ D ++RVWDV
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 164 (62.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 55/201 (27%), Positives = 88/201 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H+G V FH + S G D I +WN Y TL GH + + ++ + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYV-MCASFHPKEDLVVSASLDQTVRVWDIGAL 167
SAS D+T+ +W+ ++ + L GH +V C LV + S D TV++WDI
Sbjct: 126 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 182
Query: 168 RKK----TVSPADDILRLSQMNTD---LFGGVDAVVK----------YVLEGHDRGVNWA 210
RKK T +L ++ +T + GG+D +K Y + GH V
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 242
Query: 211 AFHPTLPLIVSGADDRQVKLW 231
+ ++S A D V++W
Sbjct: 243 SLSSEGSYLLSNAMDNTVRVW 263
Score = 151 (58.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/182 (22%), Positives = 77/182 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV- 67
S V L +++ + ++ + +WD G + R H V + + P V
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 169
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G DD +K+W+ + + T + V F+ I+S D I++W+ +
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ GH V S + ++S ++D TVRVWD+ + +P + +R+ Q N
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV-----RPFAPKERCVRIFQGNVH 283
Query: 188 LF 189
F
Sbjct: 284 NF 285
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/144 (22%), Positives = 71/144 (49%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+++G D L+GH V ++ ++ S + D+ V +W +ET V L+G
Sbjct: 95 NVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGE-RVKRLKG 150
Query: 247 HMNNV-SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLL 305
H + V SC ++ + S+D ++++WD+ K+ +QTF+ + + + ++
Sbjct: 151 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII 210
Query: 306 AAGHDSGMIVFKLERERPAFAVSG 329
+ G D+ + V+ L + + + + G
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRG 234
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V ++F+ I++ I++WD R L H V G+ +S
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 71 DDYKIKVWNYK----MHRCLFTLLGHL-DYIRTV---QFHHEYPWIVSASDDQTIRIWNW 122
D ++VW+ + RC+ G++ ++ + + + + I + S D+ + +W+
Sbjct: 256 MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SR + L GH + +FHP E +++SAS D+ + + +I
Sbjct: 316 TSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 77 (32.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
I +G+ DR V +W + T + L GH +++ V FH + II+S S DK + + ++
Sbjct: 301 IAAGSADRFVYVW--DTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 75 (31.5 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ Y L GH +N AFHP P+I+S + D+++
Sbjct: 320 ILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 147 (56.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 48/170 (28%), Positives = 76/170 (44%)
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGALR--------KKTVSPAD---DILRLSQMNT 186
V+C S+ P + L+ + LD TV+++ + L+ K V D D ++ +
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSA 611
Query: 187 DL---FGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
D G+D L HD V + F P L + DR++K W + K V
Sbjct: 612 DRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQW--DADKFEHVQ 669
Query: 243 TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
TL GH + C+ D +VS+S DKS+R+W+ T+ + RE R
Sbjct: 670 TLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWERTREPLILEEEREMQR 719
Score = 143 (55.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 49/191 (25%), Positives = 84/191 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++ +G +QL+D G L++ D HDG + + Q FV+GG D +K W++++
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELV 528
Query: 84 RCLFTLLGHLDY--IRTVQFHHEYPWIVSASDDQ----------TIRIWNWQSRTCISVL 131
+ + L RT+Q E VS S +Q T++I+ + L
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEEV-LCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDL 188
GH V+C L+ + S D+ V++W D G K + D ++ L + + L
Sbjct: 588 YGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHL 647
Query: 189 F--GGVDAVVK 197
F G D +K
Sbjct: 648 FFTAGKDRKIK 658
Score = 140 (54.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV + L +G D +K+W C +L H D + ++F +
Sbjct: 590 HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFF 649
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+A D+ I+ W+ + L GH+ + C + P D VVS+S D+++R+W+
Sbjct: 650 TAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 137 (53.3 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 35/139 (25%), Positives = 59/139 (42%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I+++ G F+ H V + + + SG D I VW+ L+ L
Sbjct: 87 GSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLK 146
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D I F E +VS+ D ++ W+ ++ C + GH V +E +
Sbjct: 147 GHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRL 206
Query: 151 VSASLDQTVRVWDIGALRK 169
++ + D +R WDI L +
Sbjct: 207 ITGASDSELRAWDIAYLEE 225
Score = 134 (52.2 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 41/152 (26%), Positives = 72/152 (47%)
Query: 173 SPADDILRLSQMN-TDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L +S ++ T VD + ++ L GH V LI +G+ DR VK+
Sbjct: 558 SPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKI 617
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W ++ + +L H ++V + F K + + +D+ I+ WD K VQT H
Sbjct: 618 WGLDFGDCHK--SLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHH 675
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERE 321
W LA P + ++++ HD + +++ RE
Sbjct: 676 QEIWCLAISPSGDYVVSSSHDKSLRLWERTRE 707
Score = 88 (36.0 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G +D I++++ T GH + ++++ + S S D I +W+ + + +
Sbjct: 83 GYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGL 142
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH + A F +++L+VS+ D V+ WD+
Sbjct: 143 YRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDL 178
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 24/114 (21%), Positives = 48/114 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR + F +SG + IK+WN +C+ T+ +Y F +V
Sbjct: 414 HRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRSTLQCIRTMT--CEYALCSFFVPGDRQVV 470
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ +++++ S + + H+ + S P + V+ D++V+ WD
Sbjct: 471 IGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWD 524
Score = 56 (24.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 21/124 (16%), Positives = 47/124 (37%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+ + GH V +F ++SGA + +K+W + + T + C F
Sbjct: 408 RITIGGHRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRSTLQCIRTMTCEYAL----CSFF 462
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMIV 315
+V ++ ++++D+ ++T W L+ P+ + G D +
Sbjct: 463 VPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKF 522
Query: 316 FKLE 319
+ E
Sbjct: 523 WDFE 526
Score = 40 (19.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
F ++ +++S +++ WD H V G+ + ++G D +++
Sbjct: 157 FLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELR 216
Query: 77 VWN 79
W+
Sbjct: 217 AWD 219
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 164 (62.8 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 46/160 (28%), Positives = 84/160 (52%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF-HHEYPWI 108
H+ V ++F+ L VSGGDD +++W+ +CL TL GH + F +++ +
Sbjct: 46 HNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNVFATNFLNNDNRKV 105
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV-VSASLDQTVRVWDIGAL 167
+S +D IR ++ +++ C +V H+ V+ S P + V +S+S D +VR++D+
Sbjct: 106 ISGGNDADIRYYDIENQKC-TVYKHHSKKVLKLSVCPTQPQVFLSSSSDGSVRLFDVRLK 164
Query: 168 RKKT-VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
K T + P ++ + N D G A++ V+ G RG
Sbjct: 165 YKDTEIQP----IQTAPSNND---GYRAILPQVIGG-GRG 196
Score = 131 (51.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 79 NYKMHRCLFTLL-GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHY 137
NY + T L GH + + ++ F+ + IVS DD+T+RIW+ R C++ L GH+
Sbjct: 32 NYAIETLEKTELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTN 91
Query: 138 VMCASFHPKEDL-VVSASLDQTVRVWDIGALRKKTVSP--ADDILRLS 182
V +F ++ V+S D +R +DI +K TV + +L+LS
Sbjct: 92 VFATNFLNNDNRKVISGGNDADIRYYDIEN-QKCTVYKHHSKKVLKLS 138
Score = 105 (42.0 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 31/112 (27%), Positives = 55/112 (49%)
Query: 197 KYVLEGH--DRGVNWAAFH-PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
K V GH ++ + F+ P IVSG+DD ++ +W K V L GH ++V+
Sbjct: 770 KQVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKI--VRILEGHDSHVNS 827
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKR----TGVQTFRREHDRFWILASHPE 301
V+ H + I ++ D I +W+ TK T +Q ++ + + L +P+
Sbjct: 828 VVCHPNEPCIATSGIDPYICLWEPTKEYPDETEMQRRKKTINHYATLDRYPK 879
Score = 75 (31.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 194 AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
A + +LEGHD VN HP P I + D + LW TK + +T
Sbjct: 812 AKIVRILEGHDSHVNSVVCHPNEPCIATSGIDPYICLWE--PTKEYPDET 859
Score = 61 (26.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 246 GHMNN--VSCVMFHA-KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEM 302
GH++ + V F+ + IVS S+D + +WD V+ + HP
Sbjct: 775 GHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVVCHPNE 834
Query: 303 NLLA-AGHDSGMIVFKLERERP 323
+A +G D + +++ +E P
Sbjct: 835 PCIATSGIDPYICLWEPTKEYP 856
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 206 (77.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 61/244 (25%), Positives = 105/244 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + + F SG D IK+WN TL GH+ +R + +P++
Sbjct: 142 HLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLF 201
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD------ 163
S +D+ ++ W+ ++ I GH V + HP+ DL+V+ D RVWD
Sbjct: 202 SCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSN 261
Query: 164 IGALRKKTVSPADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGVNWAAF 212
I L T + AD ++ + + + G +DA V+ VL H +G+ A
Sbjct: 262 IHVLSGHTGTVAD--VQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLAT 319
Query: 213 HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSI 272
HP + A +K W+ + + GH N + + + +++ S ++ S+
Sbjct: 320 HPR-EFTFASASTGSIKQWKCPGGEFMQ--NFEGH-NAIINTLSVNEDNVLFSGGDNGSM 375
Query: 273 RVWD 276
WD
Sbjct: 376 SFWD 379
Score = 204 (76.9 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 43/155 (27%), Positives = 72/155 (46%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ L+ W + I++W+ G L H VRG+ P S G+
Sbjct: 146 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGE 205
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +K W+ + ++ + GHL + T+ H +V+ D R+W+ ++R+ I VL
Sbjct: 206 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVL 265
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+GH V + V++ SLD TVR+WD+ A
Sbjct: 266 SGHTGTVADVQCQEADPQVITGSLDATVRLWDLAA 300
Score = 188 (71.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+GL+ + P++ + +++ WD +I + H V + H L V+GG
Sbjct: 188 VRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGR 247
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +VW+ + + L GH + VQ P +++ S D T+R+W+ + + VL
Sbjct: 248 DGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVL 307
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTD--L 188
T H + + HP+E SAS +++ W G + + I+ +N D L
Sbjct: 308 THHKKGIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIINTLSVNEDNVL 366
Query: 189 FGGVD 193
F G D
Sbjct: 367 FSGGD 371
Score = 184 (69.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 60/200 (30%), Positives = 96/200 (48%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI--LRLSQMN 185
V++GH +V + P + S + D+T+++W++ GALR + L +S +
Sbjct: 138 VISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRH 197
Query: 186 TDLFG-GVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
LF G D +VK + LE GH GV A HP L L+V+G D ++W M
Sbjct: 198 PYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMR 257
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT--KRTGVQTFRREHDR 292
T++ + L GH V+ V +++ S D ++R+WD+ K GV T ++ R
Sbjct: 258 -TRS-NIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIR 315
Query: 293 FWILASHP-EMNLLAAGHDS 311
LA+HP E +A S
Sbjct: 316 S--LATHPREFTFASASTGS 333
Score = 173 (66.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 62/241 (25%), Positives = 99/241 (41%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GHL ++R++ W S + D+TI+IWN + LTGH V + P+ +
Sbjct: 141 GHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYL 200
Query: 151 VSASLDQTVRVWDIGALR--KKTVSPADDILRLS-QMNTDLF--GGVDAVVK-------- 197
S D+ V+ WD+ + + + L+ DL GG D V +
Sbjct: 201 FSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRS 260
Query: 198 --YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
+VL GH V P +++G+ D V+LW + K V L H + +
Sbjct: 261 NIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGV--LTHHKKGIRSLA 318
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIV 315
H ++ S S SI+ W +Q F H+ S E N+L +G D+G +
Sbjct: 319 THPREFTFASASTG-SIKQWKCPGGEFMQNFEG-HNAIINTLSVNEDNVLFSGGDNGSMS 376
Query: 316 F 316
F
Sbjct: 377 F 377
Score = 143 (55.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 37/132 (28%), Positives = 60/132 (45%)
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
V+ GH V A P SGA DR +K+W + T A + TL GH++ V +
Sbjct: 138 VISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNL-ATGALRL-TLTGHISTVRGLAVSP 195
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMI-VFK 317
+ + S EDK ++ WD+ ++ + + LA HP ++LL G G+ V+
Sbjct: 196 RHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWD 255
Query: 318 LERERPAFAVSG 329
+ +SG
Sbjct: 256 MRTRSNIHVLSG 267
Score = 53 (23.7 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-VDTLR--GHMNNVSCVM-- 255
EGH+ +N + + ++ SG D+ + W ++ +DT G + + +M
Sbjct: 349 EGHNAIINTLSVNED-NVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTS 407
Query: 256 -FHAKQDIIVSNSEDKSIRVW 275
F +++ DK+I+VW
Sbjct: 408 TFDRTGLRLITGEADKTIKVW 428
Score = 47 (21.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
+ G+ + F T +++G D+ +K+W+ ++
Sbjct: 401 EAGIMTSTFDRTGLRLITGEADKTIKVWKQDD 432
Score = 45 (20.9 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 699 TKNFERLSFLYLITGNMDKLSKMLK 723
T F+R L LITG DK K+ K
Sbjct: 406 TSTFDRTG-LRLITGEADKTIKVWK 429
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 190 (71.9 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 42/141 (29%), Positives = 60/141 (42%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
+L +G + LW L+ H GPV+ F LF S D ++ W
Sbjct: 37 LLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSL 96
Query: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
+C TL H + TV F + W++S D IW+ QS + L GHN V + F
Sbjct: 97 KCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELKGHNAAVQSSVF 156
Query: 144 HPKEDLVVSASLDQTVRVWDI 164
V + S D+ VRVW +
Sbjct: 157 SSDSQSVATGSWDRAVRVWKL 177
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H + F + +++ D + +W + ++ ++GH V C F L
Sbjct: 21 HKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFA 80
Query: 152 SASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----LFGGVD--AVVKYV----- 199
SAS D +VR W +L+ T++ + + D L GG D A++ +
Sbjct: 81 SASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGAL 140
Query: 200 ---LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
L+GH+ V + F + +G+ DR V++W++ + +A E L+GH+ NV+C+ F
Sbjct: 141 LEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQA-EAVVLQGHLGNVACLCF 199
Score = 124 (48.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 34/123 (27%), Positives = 49/123 (39%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F H V F L ++ D K+ +W + L ++ GH ++ F +
Sbjct: 18 FSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGR 77
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-- 164
SAS D ++R W S C LT H V SF P ++S D +W I
Sbjct: 78 LFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQS 137
Query: 165 GAL 167
GAL
Sbjct: 138 GAL 140
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 212 (79.7 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 59/234 (25%), Positives = 107/234 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T RIW+ +++ + L
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMN----T 186
+GH + V E +++ S D T+R+WD+ A + + T++ +R ++ T
Sbjct: 327 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYT 386
Query: 187 DLFGGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N A + T ++VSGAD+ + LW
Sbjct: 387 FASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVN-TDGVLVSGADNGTMHLW 439
Score = 206 (77.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 63/256 (24%), Positives = 108/256 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V P++
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D+ ++ W+ + I GH V HP D++V+ S D T R+WD+
Sbjct: 263 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 322
Query: 170 -KTVSP---ADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGVNWAAFHP 214
T+S A +R + G D ++ L H + V HP
Sbjct: 323 VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP 382
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
SG+ D +K W+ + + L GH ++ + + ++VS +++ ++ +
Sbjct: 383 LHYTFASGSPDN-IKQWKFPD--GGFIQNLSGHNAIINTLAVNT-DGVLVSGADNGTMHL 438
Query: 275 WDVTKRTGVQTFRREH 290
WD RTG F+R H
Sbjct: 439 WDW--RTGYN-FQRVH 451
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 63/252 (25%), Positives = 103/252 (40%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R + W V+ S D+TI+IW+ S LTGH
Sbjct: 190 WHPPWKLYR---VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 246
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + S D+ V+ WD+ A+ + P D+L
Sbjct: 247 STVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 306
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
S+ +T V + L GH V P I++G+ D ++LW + K
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT-R 365
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V V+ H S S D +I+ W +Q + LA +
Sbjct: 366 V-TLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNT 423
Query: 301 EMNLLAAGHDSG 312
+ +L +G D+G
Sbjct: 424 D-GVLVSGADNG 434
Score = 141 (54.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P I+ H I+LWD G H VR V H F S
Sbjct: 330 TNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFAS 389
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
G D IK W + + L GH I T+ + + +VS +D+ T+ +W+W++
Sbjct: 390 GSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNTDGV-LVSGADNGTMHLWDWRTGYNF 447
Query: 125 -RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW 162
R +V G + +F E +++A D+T++V+
Sbjct: 448 QRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 489
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 212 (79.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 72/241 (29%), Positives = 111/241 (46%)
Query: 58 HFHKS-QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQT 116
H +S P S D +++W+ R L GH + V++ I ++S D+T
Sbjct: 246 HLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTSSHDRT 304
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV-SASLDQTVRV----WDIGALRKKT 171
I++WN Q+ T I L+ H H V + D ++ +A D T +V D A+ KK
Sbjct: 305 IKVWNSQTGTLIQTLSAHAHRVNHLAL--STDFILRTAYHDHTGKVPESDADKVAMAKKR 362
Query: 172 VSPA--------DDILRLSQMNTDLFGGVDAVVKYV--LEGHDRGVNWAAFHPTLPLIVS 221
A + ++ S T ++ K V L GH + VN F P + I S
Sbjct: 363 FEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIAS 422
Query: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRT 281
D VKLW + K + TLRGH+ V F A ++VS+S+D +++VW+V RT
Sbjct: 423 AGFDNHVKLWNGRDGKF--ITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNV--RT 478
Query: 282 G 282
G
Sbjct: 479 G 479
Score = 158 (60.7 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 45/163 (27%), Positives = 81/163 (49%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFT-LLGH 92
++WD GT + H V V + + + +G D +++W+ K + L L GH
Sbjct: 174 RIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGH 233
Query: 93 LDYIRTVQ---FHHE---YPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+ +I ++ +H + +P + SAS D T+RIW+ S+ VL+GH V C +
Sbjct: 234 VKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGT 293
Query: 147 EDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRLSQMNTD 187
+ S S D+T++VW+ G L + + A + L+ ++TD
Sbjct: 294 GKIYTS-SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLA-LSTD 334
Score = 152 (58.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 36/129 (27%), Positives = 57/129 (44%)
Query: 35 LWDYRMGTL-IDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHL 93
LWD + + R H V V F S G D +K+WN + + + TL GH+
Sbjct: 388 LWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHV 447
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
+ F + +VS+S D T+++WN ++ L GH V + P V S
Sbjct: 448 GAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSG 507
Query: 154 SLDQTVRVW 162
D+ +R+W
Sbjct: 508 GKDKAIRIW 516
Score = 141 (54.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 84 RCLFTLLGHLDYIRTVQFHH-EYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
RC ++ GH + I F +VS S D T RIW+ + T + L GH +V+ S
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 143 FHPKEDLVVSASLDQTVRVWD 163
+ P ++ + S+D TVR+WD
Sbjct: 199 YSPNGAMIATGSMDNTVRIWD 219
Score = 140 (54.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 67 VSGGDDYKIKVWNYKMH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
VS DD+ + +W+ + + + LLGH + V F + +I SA D +++WN +
Sbjct: 378 VSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDG 437
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI 178
I+ L GH V F L+VS+S D T++VW++ G L + D++
Sbjct: 438 KFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEV 492
Score = 140 (54.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 89 LLGHLDYIRTVQ---FHHE---YPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
L GH+ +I ++ +H + +P + SAS D T+RIW+ S+ VL+GH V C
Sbjct: 230 LKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVR 289
Query: 143 FHPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRLSQMNTDLF---------GG 191
+ + S S D+T++VW+ G L + + A + L+ ++TD G
Sbjct: 290 WGGTGKIYTS-SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLA-LSTDFILRTAYHDHTGK 347
Query: 192 V-DAVVKYVLEGHDRGVNWAAFHPTL-PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
V ++ V R A + + +VS +DD + LW E+ + V L GH
Sbjct: 348 VPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDP-ESSSKPVARLLGHQK 406
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
V+ V F I S D +++W+ + T R
Sbjct: 407 EVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLR 444
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 45/165 (27%), Positives = 71/165 (43%)
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
S VSG D ++W+ L TL GH ++ V + I + S D T+RIW+
Sbjct: 160 SSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWD 219
Query: 122 WQSRTCISV-LTGHNHYVMCASFHPKE------DLVVSASLDQTVRVWDIGALRKKTVSP 174
+ + L GH ++ ++ P + SAS D TVR+WD+ + K+
Sbjct: 220 AKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDV--ISKR---- 273
Query: 175 ADDIL--RLSQMNTDLFGGVDAVVKYVLEGHDRGVN-WAAFHPTL 216
AD +L + +GG + Y HDR + W + TL
Sbjct: 274 ADIVLSGHKGSVTCVRWGGTGKI--YT-SSHDRTIKVWNSQTGTL 315
Score = 112 (44.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 200 LEGHDRGVN---WAAFHPTL---PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
L+GH + + W +H P + S + D V++W + +A ++ L GH +V+C
Sbjct: 230 LKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRA-DI-VLSGHKGSVTC 287
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGM 313
V + I S S D++I+VW+ T +QT R LA + L A HD
Sbjct: 288 VRWGGTGKIYTS-SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTG 346
Query: 314 IVFKLERERPAFA 326
V + + ++ A A
Sbjct: 347 KVPESDADKVAMA 359
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 180 (68.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G ++LWD R + F ++ V V F+ + +SGG D IKVW+ + ++ +T+
Sbjct: 201 GTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR 259
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ----SRTCISVLTG--HN---HYVMCA 141
GH D + + E +++S + D T+RIW+ + C+ + G HN + + C
Sbjct: 260 GHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRC- 318
Query: 142 SFHPKEDLVVSASLDQTVRVWDIGALR 168
S+ P + S D+ V VWD + R
Sbjct: 319 SWSPDGSKIAGGSADRFVYVWDTTSRR 345
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/209 (26%), Positives = 93/209 (44%)
Query: 86 LFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC--ISVLTGHNHYVMCASF 143
+ L GH + +FH + SA D+ I +WN C + L GH+ VM +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHY 144
Query: 144 HPKEDLVVSASLDQTVRVWD--IGALRKKTVSPADDILRL--SQMNTDLF--GGVDAVVK 197
+ ++ SAS D+TV VWD G K+ + ++ L G D VK
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 204
Query: 198 Y-------VLEGHDRGVNWAA--FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHM 248
++ A F+ T I+SG D +K+W + + K T+RGH
Sbjct: 205 LWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHA 262
Query: 249 NNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
++V+ + ++ ++SN+ D ++R+WDV
Sbjct: 263 DSVTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Score = 160 (61.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 55/201 (27%), Positives = 87/201 (43%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWN-YKMHRCLFTLLGHLDYIRTVQFHHEYPWI 108
H+G V FH S G D I +WN Y TL GH + + ++ + +
Sbjct: 92 HEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 151
Query: 109 VSASDDQTIRIWNWQSRTCISVLTGHNHYV-MCASFHPKEDLVVSASLDQTVRVWDIGAL 167
SAS D+T+ +W+ ++ + L GH +V C LV + S D TV++WDI
Sbjct: 152 FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 208
Query: 168 RKK----TVSPADDILRLSQMNTD---LFGGVDAVVK----------YVLEGHDRGVNWA 210
RKK T +L ++ +T + GG+D +K Y + GH V
Sbjct: 209 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL 268
Query: 211 AFHPTLPLIVSGADDRQVKLW 231
+ ++S A D V++W
Sbjct: 269 SLSSEGSYLLSNAMDNTVRIW 289
Score = 151 (58.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 40/154 (25%), Positives = 71/154 (46%)
Query: 17 FHSKRPW--ILASL-HSGVIQLWD-YRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDD 72
FH PW LAS +I LW+ Y H G V +H++ + S D
Sbjct: 101 FH---PWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTD 157
Query: 73 YKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV-SASDDQTIRIWNWQSRTCISVL 131
+ VW+ + + L GH ++ + P +V + SDD T+++W+ + + +
Sbjct: 158 KTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ-- 215
Query: 132 TGHNHY-VMCASFHPKEDLVVSASLDQTVRVWDI 164
T N Y V+ +F+ D ++S +D ++VWD+
Sbjct: 216 TFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 249
Score = 146 (56.5 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 39/182 (21%), Positives = 77/182 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFV- 67
S V L +++ + ++ + +WD G + R H V + + P V
Sbjct: 136 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 195
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+G DD +K+W+ + + T + V F+ I+S D I++W+ +
Sbjct: 196 TGSDDGTVKLWDIRKKAAVQTFQNTYQVL-AVTFNDTSDQIISGGIDNDIKVWDLRQNKL 254
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ GH V S + ++S ++D TVR+WD+ + +P + +++ Q N
Sbjct: 255 TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV-----RPFAPKERCVKIFQGNVH 309
Query: 188 LF 189
F
Sbjct: 310 NF 311
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/144 (22%), Positives = 71/144 (49%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
+++G D L+GH V ++ ++ S + D+ V +W +ET V L+G
Sbjct: 121 NVYGDCDNYA--TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGE-RVKRLKG 176
Query: 247 HMNNV-SCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLL 305
H + V SC ++ + S+D ++++WD+ K+ VQTF+ + + + ++
Sbjct: 177 HTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQII 236
Query: 306 AAGHDSGMIVFKLERERPAFAVSG 329
+ G D+ + V+ L + + + + G
Sbjct: 237 SGGIDNDIKVWDLRQNKLTYTMRG 260
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 36/162 (22%), Positives = 74/162 (45%)
Query: 11 RVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGG 70
+V ++F+ I++ I++WD R L H V G+ +S
Sbjct: 222 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 281
Query: 71 DDYKIKVWNYK----MHRCLFTLLGHL-DYIRTV---QFHHEYPWIVSASDDQTIRIWNW 122
D +++W+ + RC+ G++ ++ + + + + I S D+ + +W+
Sbjct: 282 MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDT 341
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
SR + L GH V +FHP+E +++SAS D+ + + +I
Sbjct: 342 TSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 76 (31.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
I G+ DR V +W + T + L GH +V+ + FH ++ II+S S DK + + ++
Sbjct: 327 IAGGSADRFVYVW--DTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 75 (31.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQV 228
+ Y L GH VN AFHP P+I+S + D+++
Sbjct: 346 ILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 216 (81.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 72/272 (26%), Positives = 132/272 (48%)
Query: 10 NRVKGLSFHSK-RPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL-FV 67
+++ G+ +++ R ++ +S + G+++LWD G I F EH+ V F ++ P
Sbjct: 773 SKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLA 832
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVS-ASDDQTIRIWNWQS-R 125
SG DD +K+WN CL T+ ++ + VQF + +++ S D ++ ++ R
Sbjct: 833 SGSDDCSVKLWNINERNCLGTIR-NIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLR 891
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP-ADDILRLSQM 184
T +L+GHN V A F E LV +AS D T+++WD+ +S A +
Sbjct: 892 TPWCILSGHNKAVSYAKFLDNETLV-TASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHT 950
Query: 185 NTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL 244
N F G+ Y+ G + +A +H +LP+ ++ K ++ E++
Sbjct: 951 NEKNFVGLSTSDGYIACGSETNEVYA-YHRSLPMPITS-----YKFGSIDPISGKEIE-- 1002
Query: 245 RGHMNN--VSCVMFHAKQDIIVSNSEDKSIRV 274
NN VS V + + +++VS S + SI+V
Sbjct: 1003 --EDNNLFVSSVCWRKRSNMVVSASSNGSIKV 1032
>UNIPROTKB|B4DNJ6 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005739 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0016301 HOGENOM:HOG000174258
HOVERGEN:HBG055228 OMA:LWQTTVG UniGene:Hs.504895 HGNC:HGNC:30796
ChiTaRS:STRAP EMBL:AC022073 EMBL:AK297942 IPI:IPI00294536
SMR:B4DNJ6 IntAct:B4DNJ6 STRING:B4DNJ6 Ensembl:ENST00000025399
UCSC:uc010shw.2 Uniprot:B4DNJ6
Length = 363
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 68/276 (24%), Positives = 121/276 (43%)
Query: 13 KGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDD 72
KG H R L+ H G L G I F H G V G +K + D
Sbjct: 37 KGAGQHLPR---LSGQHDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAAD 93
Query: 73 YKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI-SVL 131
+ KVW+ L TL H ++TV F + ++++ D+ +RI++ +
Sbjct: 94 FTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEI 152
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-------KTVS-----PADDIL 179
+GH + A + ++ ++SA D+TVR+WD + + +VS P +IL
Sbjct: 153 SGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEIL 211
Query: 180 RLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
++ + F ++ +N A+ HP +V+G +D KL++ +
Sbjct: 212 VITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPEKEFLVAGGED--FKLYKYDYNSGE 269
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
E+++ +GH + CV F ++ S SED ++R+W
Sbjct: 270 ELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLW 305
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 143 (55.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 49/191 (25%), Positives = 84/191 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++ +G +QL+D G L++ D HDG + + Q FV+GG D +K W++++
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELV 528
Query: 84 RCLFTLLGHLDY--IRTVQFHHEYPWIVSASDDQ----------TIRIWNWQSRTCISVL 131
+ + L RT+Q E VS S +Q T++I+ + L
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEEV-LCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDL 188
GH V+C L+ + S D+ V++W D G K + D ++ L + + L
Sbjct: 588 YGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHL 647
Query: 189 F--GGVDAVVK 197
F G D +K
Sbjct: 648 FFTAGKDRKIK 658
Score = 142 (55.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGALR--------KKTVSPAD---DILRLSQMNT 186
V+C S+ P + L+ + LD TV+++ + L+ K V D D ++ +
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSA 611
Query: 187 DL---FGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
D G+D L HD V + F P L + DR++K W + K +
Sbjct: 612 DRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQW--DADKFEHIQ 669
Query: 243 TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
TL GH + C+ D +VS+S DKS+R+W+ T+ + +E R
Sbjct: 670 TLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTREPLILEEEKEMQR 719
Score = 140 (54.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV + L +G D +K+W C +L H D + ++F +
Sbjct: 590 HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFF 649
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+A D+ I+ W+ I L GH+ + C + P D VVS+S D+++R+W+
Sbjct: 650 TAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 135 (52.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I+++ G F+ H + + + + SG D I VW+ L+ L
Sbjct: 87 GSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLK 146
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D I F E +V++ D ++ W+ ++ C + GH V +E +
Sbjct: 147 GHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRL 206
Query: 151 VSASLDQTVRVWDIGALRK 169
++ + D +R WDI L++
Sbjct: 207 ITGASDSELRAWDISYLQE 225
Score = 134 (52.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 173 SPADDILRLSQMN-TDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L +S ++ T VD + ++ L GH V LI +G+ DR VK+
Sbjct: 558 SPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKI 617
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W ++ + +L H ++V + F K + + +D+ I+ WD K +QT H
Sbjct: 618 WGLDFGDCHK--SLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHH 675
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQK 349
W LA P + ++++ HD + +++ RE P + R Y E ++
Sbjct: 676 QEIWCLAVSPSGDYVVSSSHDKSLRLWERTRE-PLILEEEKEM----QREAEYEESVAKE 730
Query: 350 DTQVIP 355
D +P
Sbjct: 731 DQPAVP 736
Score = 105 (42.0 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
T+ GH +RT+ F + I+SA+ D +I+IWN + CI + Y +C+ F P +
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTMACE--YALCSFFVPGD 466
Query: 148 DLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVDAVVKY 198
VV + ++++D+ + +T+ D L ++ D + GG D VK+
Sbjct: 467 RQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKF 522
Score = 86 (35.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G +D I++++ T GH I ++++ + S S D I +W+ + + +
Sbjct: 83 GYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGL 142
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH + A F +++L+V++ D V+ WD+
Sbjct: 143 YRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDL 178
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 24/114 (21%), Positives = 47/114 (41%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR + F +S D IK+WN +C+ T+ +Y F +V
Sbjct: 414 HRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTMA--CEYALCSFFVPGDRQVV 470
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ +++++ S + + H+ + S P + V+ D++V+ WD
Sbjct: 471 IGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWD 524
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/124 (17%), Positives = 47/124 (37%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+ + GH V +F I+S A D +K+W + + + T+ C F
Sbjct: 408 RITIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQC--IRTMA--CEYALCSFF 462
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMIV 315
+V ++ ++++D+ ++T W L+ P+ + G D +
Sbjct: 463 VPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKF 522
Query: 316 FKLE 319
+ E
Sbjct: 523 WDFE 526
Score = 40 (19.1 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 10/63 (15%), Positives = 25/63 (39%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
F ++ ++ S +++ WD H V G+ + ++G D +++
Sbjct: 157 FLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELR 216
Query: 77 VWN 79
W+
Sbjct: 217 AWD 219
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 68/256 (26%), Positives = 114/256 (44%)
Query: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF-VSGGDDYKIKVWNYK 81
ILA+ L+ G I++W+ + G L+ H VR + F S L VS D +++W+
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 82 MH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
H + + L GHL ++ + + SA+ ++++ +W+ +S T I L GH V+
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 246
Query: 141 ASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP-ADDILRLSQMNTDLFGGVDAVVKYV 199
F P L+V+AS D V +WD P + LRL +T L +D
Sbjct: 247 CDFSPDSALLVTASYDTNVIMWD----------PYTGERLRLLH-HTQLDPPMDDS---- 291
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
+ H + F P + + ADDR +++W + E K M N C F
Sbjct: 292 -DVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-ELKT---PIAFAPMTNGLCCTFFPH 346
Query: 260 QDIIVSNSEDKSIRVW 275
+I + + D ++ W
Sbjct: 347 GGVIATGTRDGHVQFW 362
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 207 (77.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 48/161 (29%), Positives = 79/161 (49%)
Query: 19 SKRPWILASLHSGVIQLWD---YRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKI 75
+KR WI S G I++W +R+ + F + G + V + S DD I
Sbjct: 65 NKR-WIATSSSDGTIKIWSALTFRLECTL--FGHYRG-ISQVKWATGSKYLASASDDKTI 120
Query: 76 KVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
++W+++ + L GH +Y+ ++ F+ +VS S D+T+RIWN Q TC+ +L H+
Sbjct: 121 RIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHS 180
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSP 174
++ S L +AS D R+WD+ G K V P
Sbjct: 181 EPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEP 221
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/151 (31%), Positives = 79/151 (52%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H+ V V ++ + D IK+W+ R TL GH I V++ ++
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
SASDD+TIRIW+++ R + L GH +YV F+P L+VS S D+TVR+W++ G
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTC 172
Query: 168 RKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
+ + ++ I+ +S ++ D G + A Y
Sbjct: 173 LRMLPAHSEPIISVS-ISAD--GTLCATASY 200
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 57/250 (22%), Positives = 104/250 (41%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
I++WD+ + H V + F+ L VSG D +++WN + CL L H
Sbjct: 120 IRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAH 179
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH-NHYVMCASFHPKEDLVV 151
+ I +V + +AS D RIW+ S C+ L N + F ++
Sbjct: 180 SEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLL 239
Query: 152 SASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY-VLEGHDRGV--N 208
++L+ +R+WD R + + R S M+ D + + L +D +
Sbjct: 240 VSNLNSQIRLWDYRRNRVVRIFDSHVNTRYS-MSWDCYSSKNIPKNTEALPNNDSSYPDD 298
Query: 209 WAAF-HPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ--DIIVS 265
+F H LI S +D +++ + TK D++R H ++ + + I++
Sbjct: 299 AESFMHDAYLLIPS--EDGTIQITDPS-TKIIIDDSIR-HSDDPETSLLNVTSLGPFIIT 354
Query: 266 NSEDKSIRVW 275
+ D +RVW
Sbjct: 355 SGTDPYVRVW 364
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L GH++ V + P I + + D +K+W T E TL GH +S V +
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSAL-TFRLEC-TLFGHYRGISQVKWATG 107
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGH-DSGMIVFKL 318
+ S S+DK+IR+WD KR V+ + + + +P LL +G D + ++ L
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
Query: 319 E 319
+
Sbjct: 168 Q 168
>UNIPROTKB|I3LNC4 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 OMA:LWQTTVG EMBL:FP325218
Ensembl:ENSSSCT00000023218 Uniprot:I3LNC4
Length = 363
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 68/277 (24%), Positives = 123/277 (44%)
Query: 13 KGLSFH-SKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
KG + H +RP H G L G I F H G V G +K +
Sbjct: 37 KGFTVHLPRRP----GQHHGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAA 92
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI-SV 130
D+ KVW+ L TL H ++TV F + ++++ D+ +RI++
Sbjct: 93 DFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKE 151
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-------KTVS-----PADDI 178
++GH+ + A + ++ ++SA D+TVR+WD + + +VS P +I
Sbjct: 152 ISGHSSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEI 210
Query: 179 LRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
L ++ + F ++ +N A+ HP +V+G +D KL++ +
Sbjct: 211 LVITYGRSIAFHSAISLDPIKSFEAPATINSASLHPEKEFLVAGGED--FKLYKYDYNSG 268
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
E+++ +GH + CV F ++ S SED ++R+W
Sbjct: 269 EELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLW 305
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 210 (79.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 86/320 (26%), Positives = 141/320 (44%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL-GH 92
++WD T + H V V + + +G D I++W+ K +CL L GH
Sbjct: 169 RIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGH 228
Query: 93 LDYIRTVQFH--H-----EYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHP 145
+I ++ + H P + S+S D TI+IW+ SR C ++GH + V C +
Sbjct: 229 SKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGG 288
Query: 146 KEDLVVSASLDQTVRVWDI---GALRKKTVSPADDILRLSQMNTDL---FGGVDAVVKYV 199
+ L+ S S D+TVRVWDI G S A + LS ++TD G D K
Sbjct: 289 -QGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLS-LSTDYALRIGAFDHTGKKP 346
Query: 200 L---EGHDRGV-NWAAFHP----TLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNN 250
E + + N+ + ++V+ +DD + LW + TK + + GH
Sbjct: 347 STPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKP--IARMTGHQKL 404
Query: 251 VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA-GH 309
V+ V F IVS S D SI++WD + TFR + +A + LL +
Sbjct: 405 VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSK 464
Query: 310 DSGMIVFKLERERPAFAVSG 329
D+ + V+ + + + + G
Sbjct: 465 DTTLKVWDVRTRKLSVDLPG 484
Score = 151 (58.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 68/272 (25%), Positives = 112/272 (41%)
Query: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNY 80
+P + +S G I++WD H V V + Q L SG D ++VW+
Sbjct: 248 KPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRTVRVWDI 306
Query: 81 KMH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
RC+ L H ++ + +Y + A D T + + L N+ +
Sbjct: 307 NSQGRCINILKSHAHWVNHLSLSTDYALRIGAFD-HTGKKPSTPEEAQKKAL--ENYEKI 363
Query: 140 CASFHPKEDLVVSASLDQTVRVWD-------IGAL--RKKTV-----SPADD-ILRLSQM 184
C E+++V+AS D T+ +W+ I + +K V SP I+ S
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 185 NT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDT 243
N+ L+ G D GH V A+ L+VS + D +K+W + T+ VD
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR-TRKLSVD- 481
Query: 244 LRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVW 275
L GH + V V + + S +DK +R+W
Sbjct: 482 LPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
H S + V+G D ++W+ + TL GH +++ V + + I + S D TIR+
Sbjct: 154 HTSSRM-VTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRL 212
Query: 120 WNWQSRTCIS-VLTGHNHYVMCASFHP-------KEDLVVSASLDQTVRVWD 163
W+ +S C+ L GH+ ++ S+ P + + S+S D T+++WD
Sbjct: 213 WDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 89 LLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
+ GH I F H +V+ + D T RIW+ ++T + L GH ++V+C S+ P
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 148 DLVVSASLDQTVRVWD 163
+++ + S+D T+R+WD
Sbjct: 199 EVIATGSMDNTIRLWD 214
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V ++F +I+++ I+LWD R G I F H V V + L VS
Sbjct: 405 VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSK 464
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
D +KVW+ + + L GH D + TV + + + S D+ +R+W
Sbjct: 465 DTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 200 LEGHDRGVNWAAFHP-TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
+ GH + +AF P T +V+GA D ++W +T+ + TL+GH N V CV +
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDC-DTQT-PMHTLKGHYNWVLCVSWSP 196
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA-SHPEMNLLAAG 308
++I + S D +IR+WD + R H + WI + S ++L+ G
Sbjct: 197 DGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSK-WITSLSWEPIHLVKPG 246
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 203 (76.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 51/185 (27%), Positives = 86/185 (46%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ S+ V+ + + + L++ ++LWD G RF H V V K
Sbjct: 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS 120
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF------HHEYPWIVSASDDQTIR 118
+ +SG D IKVW K +CL TLLGH D++ V+ + I+SA +D+ ++
Sbjct: 121 MIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADD 177
WN + GHN + + P L+ SA D + +W++ A + T+S D+
Sbjct: 180 AWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE 239
Query: 178 ILRLS 182
+ L+
Sbjct: 240 VFSLA 244
Score = 127 (49.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 37/156 (23%), Positives = 67/156 (42%)
Query: 37 DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYI 96
D + G + F H V+ +S D +++W+ +GH +
Sbjct: 51 DQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV 110
Query: 97 RTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDL------V 150
+V + I+S S D+TI++W + + C++ L GHN +V P E +
Sbjct: 111 MSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTI 169
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
+SA D+ V+ W++ + + AD I S +NT
Sbjct: 170 ISAGNDKMVKAWNLNQFQIE----ADFIGHNSNINT 201
Score = 122 (48.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
I+S +D+ VK W +N+ + E D + GH +N++ + +I S +D I +W++
Sbjct: 169 IISAGNDKMVKAWNLNQFQI-EADFI-GHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226
Query: 279 KRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERE------RPAFA 326
+ + T + D + LA P LAA +G+ VF L+ + RP FA
Sbjct: 227 AKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFA 279
Score = 113 (44.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 31/121 (25%), Positives = 54/121 (44%)
Query: 50 HDGPVRGVHFHKSQP-LFVSGGDDYKIKVW-----NYKMHRCLFTLLGHLDYIRTVQFHH 103
H+G V + QP L +S D + W + K + + GH ++
Sbjct: 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 104 EYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+ + +SAS D+T+R+W+ + GH VM K +++S S D+T++VW
Sbjct: 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135
Query: 164 I 164
I
Sbjct: 136 I 136
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 214 (80.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 52/162 (32%), Positives = 81/162 (50%)
Query: 15 LSFHSKRPW-ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDD 72
L HS W +LAS ++LWD G+L + H G V V F L SG D
Sbjct: 699 LEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFD 758
Query: 73 YKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT 132
+++W+ TL GH +++R+V F + + S S D+T+R+W+ + + L
Sbjct: 759 KTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLR 818
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVWD--IGALRKKTV 172
GH+ V +F P L+ S S D+TVR+WD G L++ +
Sbjct: 819 GHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLI 860
Score = 158 (60.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
++ LEGH V AF P L+ SG+ D+ V+LW T + + TLRGH N V V
Sbjct: 729 LQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDP-ATGSLQ-QTLRGHSNWVRSVA 786
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
F ++ S S DK++R+WD + QT R D +A P+ LLA+G
Sbjct: 787 FSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASG 839
Score = 145 (56.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 149 LVVSASLDQTVRVWD--IGALRKK---------TVSPADDILRLSQMNTD----LFGGVD 193
++ S S D+TVR+WD G+L++ +V+ + D L+ + D L+
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 194 AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
++ L GH V AF P L+ SG+ D+ V+LW T + + TLRGH + V
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP-ATGSLQ-QTLRGHSDTVRS 826
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
V F ++ S S DK++R+WD T QT
Sbjct: 827 VAFSPDGRLLASGSFDKTVRLWDPATGTLQQT 858
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 96 IRTVQFHHEYPWIV--SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
++T++ H W V S SDD+T+R+W+ + + L GH+ +V+ +F P L+ S
Sbjct: 696 LQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASG 755
Query: 154 SLDQTVRVWD--IGALRK 169
S D+TVR+WD G+L++
Sbjct: 756 SFDKTVRLWDPATGSLQQ 773
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
E S V ++F + + ++LWD G+L H VR V F L
Sbjct: 734 EGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRL 793
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
SG D +++W+ TL GH D +R+V F + + S S D+T+R+W+
Sbjct: 794 LASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/256 (26%), Positives = 114/256 (44%)
Query: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF-VSGGDDYKIKVWNYK 81
ILA+ L+ G I++W+ + G L+ H VR + F S L VS D +++W+
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 82 MH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
H + + L GHL ++ + + SA+ ++++ +W+ +S T I L GH V+
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 141 ASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP-ADDILRLSQMNTDLFGGVDAVVKYV 199
F P L+V+AS D V +WD P + LR S +T L +D
Sbjct: 245 CDFSPDSALLVTASYDTNVIMWD----------PYTGERLR-SLHHTQLSPPMDDS---- 289
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
+ H + F P + + ADDR +++W + E K M N C F
Sbjct: 290 -DVHISSLRSVCFSPEGLYLATVADDRLLRIWAL-ELKT---PIAFAPMTNGLCCTFFPH 344
Query: 260 QDIIVSNSEDKSIRVW 275
+I + + D ++ W
Sbjct: 345 GGVIATGTRDGHVQFW 360
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 207 (77.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 67/255 (26%), Positives = 115/255 (45%)
Query: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF-VSGGDDYKIKVWNYK 81
ILA+ L+ G I++W+ + G L+ H VR + F S L VS D +++W+
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 82 MH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
H + + L GHL ++ + + SA+ ++++ +W+ +S T I L GH V+
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 246
Query: 141 ASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVL 200
F P L+V+AS D V +WD ++ S L +Q+N + D+ V
Sbjct: 247 CDFSPDSALLVTASYDTNVIMWD-PYTGERLRS-----LHHTQLNPPMD---DSDV---- 293
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
H + F P + + ADDR +++W + E K M N C F
Sbjct: 294 --HISSLRSVCFSPEGLYLATVADDRLLRIWAL-ELKT---PIAFAPMTNGLCCTFFPHG 347
Query: 261 DIIVSNSEDKSIRVW 275
+I + + D ++ W
Sbjct: 348 GVIATGTRDGHVQFW 362
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 209 (78.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 71/262 (27%), Positives = 120/262 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+ +WD ++ + H G V + F + + L VSG D I +W+++ R L GH
Sbjct: 243 VSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGH 302
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT----CISVLTGHNHYVMCASFHPKED 148
D + V Y I+S+S D T R+W + + C+ VL GH V + K
Sbjct: 303 TDNVLGVVVSENY--IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTG 360
Query: 149 LVVSASLDQTVRVWDI--G-ALR-----KKTVSPADD-----ILRLSQMNTDLFGGVDAV 195
L+V+AS D+T+R WDI G +R ++ ++ A + S + +F
Sbjct: 361 LIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGK 420
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN-VSCV 254
+ +L+GH+ + F+ IVSG D V++W N + V L N+ V +
Sbjct: 421 LLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNTGEQHCV--LHNSRNSRVFGL 476
Query: 255 MFHAKQDIIVSNSEDKSIRVWD 276
F ++ I ++S + I VW+
Sbjct: 477 QFDHRRIIACTHSSE--ILVWN 496
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 62/252 (24%), Positives = 113/252 (44%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L K S V L F +R +++ I +WD++ + + H V GV
Sbjct: 253 ILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV- 311
Query: 61 KSQPLFVSGGDDYKIKVWNYKM----HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQT 116
S+ +S D+ +VW C+ L GHL + +VQ+ + IV+AS D+T
Sbjct: 312 -SENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRT 370
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPA 175
+R W+ + CI ++ H + CA ++ K +VS S D T+R+++ + + + +
Sbjct: 371 LRTWDITTGHCIRIIHAHQRGIACAQYNGK--FIVSGSSDLTIRIFEASSGKLLRMLQGH 428
Query: 176 DDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA--DDRQV-KL 230
+D++R + N + + GG D V+ + + G H + V G D R++
Sbjct: 429 EDLIRTVRFNDEKIVSGGYDGTVR--IWNFNTGEQHCVLHNSRNSRVFGLQFDHRRIIAC 486
Query: 231 WRMNETKAWEVD 242
+E W D
Sbjct: 487 THSSEILVWNFD 498
Score = 195 (73.7 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 74/283 (26%), Positives = 124/283 (43%)
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+ VSG D + VW+ L+ L GH + + F +VS S D TI IW+WQ+
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQN 292
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPAD---DILR- 180
R + V GH V+ E+ ++S+S D T RVW + A SPA+ +LR
Sbjct: 293 RRPLKVYFGHTDNVLGVVV--SENYIISSSRDHTARVWRLDA-----TSPAEACMHVLRG 345
Query: 181 -LSQMNTDLFGGVDAVVKYVLEGHDRGVN-W------------------AAFHPTLPLIV 220
L+ +N+ + ++ V DR + W A IV
Sbjct: 346 HLASVNSVQYSSKTGLI--VTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIV 403
Query: 221 SGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKR 280
SG+ D ++++ + K + L+GH + + V F+ ++ IVS D ++R+W+
Sbjct: 404 SGSSDLTIRIFEASSGKLLRM--LQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFN-- 457
Query: 281 TGVQTFRREHDR----FWILASHPEMNLLAAGHDSGMIVFKLE 319
TG Q + R F + H ++A H S ++V+ +
Sbjct: 458 TGEQHCVLHNSRNSRVFGLQFDH--RRIIACTHSSEILVWNFD 498
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 48/197 (24%), Positives = 90/197 (45%)
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGA--LRKKTVSPADDILRLS---QMNTDLFGGV 192
V C + ++++VS S D+TV VWD+ + + K + +L L + N + G
Sbjct: 224 VYCVQYD--DEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSS 281
Query: 193 DAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-- 240
D+ + V GH V I+S + D ++WR++ T E
Sbjct: 282 DSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENY--IISSSRDHTARVWRLDATSPAEAC 339
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
+ LRGH+ +V+ V + +K +IV+ S D+++R WD+T ++ H R A +
Sbjct: 340 MHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHA-HQRGIACAQYN 398
Query: 301 EMNLLAAGHDSGMIVFK 317
+++ D + +F+
Sbjct: 399 GKFIVSGSSDLTIRIFE 415
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 144 (55.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV + L +G D +K+W C +L H D + ++F +
Sbjct: 589 HKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFF 648
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+A D I+ W+ I L GH+ + C + P D VVSAS D+++R+W+
Sbjct: 649 TAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 138 (53.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 47/170 (27%), Positives = 74/170 (43%)
Query: 138 VMCASFHPKEDLVVSASLDQTVRVWDIGALR--------KKTVSPAD---DILRLSQMNT 186
V+C S+ P + L+ + LD TV+V+ + L+ K V D D ++ +
Sbjct: 551 VLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSA 610
Query: 187 DL---FGGVD-AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
D G+D L HD V + F P L + D ++K W + K +
Sbjct: 611 DRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQW--DADKFEHIQ 668
Query: 243 TLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
TL GH + C+ D +VS S DKS+R+W+ T+ + RE R
Sbjct: 669 TLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLILEEEREMQR 718
Score = 135 (52.6 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 31/139 (22%), Positives = 60/139 (43%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I+++ G F+ H V + + + SG D + +W+ L+ L
Sbjct: 87 GAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLK 146
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + F E +V++ D ++ W+ ++ C + GH V +E +
Sbjct: 147 GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRL 206
Query: 151 VSASLDQTVRVWDIGALRK 169
++ + D +R WDI L++
Sbjct: 207 ITGAADSELRAWDIDYLQE 225
Score = 132 (51.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 173 SPADDILRLSQMN-TDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L +S ++ T VD + ++ L GH V LI +G+ DR VK+
Sbjct: 557 SPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKI 616
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W ++ +L H ++V + F K + + +D I+ WD K +QT H
Sbjct: 617 WGLDFGDCHR--SLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHH 674
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERE 321
W LA P + +++A HD + +++ RE
Sbjct: 675 QEIWCLAVSPSGDYVVSASHDKSLRLWERTRE 706
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 46/191 (24%), Positives = 83/191 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++ +G +QL+D GTL++ HDG + + Q FV+GG D +K W++++
Sbjct: 468 VVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELV 527
Query: 84 RCLFTLLGHLDY--IRTVQFHHEYPWIVSASDDQ----------TIRIWNWQSRTCISVL 131
+ L RT+Q + VS S +Q T++++ + L
Sbjct: 528 TDKNSTQKRLSVKQTRTLQLDEDV-LCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSL 586
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDL 188
GH V+C L+ + S D+ V++W D G + + D ++ L + + L
Sbjct: 587 YGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHL 646
Query: 189 F--GGVDAVVK 197
F G D +K
Sbjct: 647 FFTAGKDHKIK 657
Score = 87 (35.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 26/121 (21%), Positives = 49/121 (40%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR + F +S D IK+WN +C+ T+ +Y F +V
Sbjct: 413 HRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTM--PCEYALCSFFVPGDRQVV 469
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
+ +++++ S T + + H+ + S P + V+ D+ V+ WD +
Sbjct: 470 IGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTD 529
Query: 170 K 170
K
Sbjct: 530 K 530
Score = 85 (35.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G +D I++++ T GH + ++++ + S S D + IW+ + + +
Sbjct: 83 GYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGL 142
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH V A F + +L+V++ D V+ WD+
Sbjct: 143 YRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDL 178
Score = 40 (19.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 11/63 (17%), Positives = 25/63 (39%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
F +R ++ S +++ WD H V G+ + ++G D +++
Sbjct: 157 FLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELR 216
Query: 77 VWN 79
W+
Sbjct: 217 AWD 219
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 63/256 (24%), Positives = 109/256 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V P++
Sbjct: 202 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 261
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D+ ++ W+ + I GH V HP D++V+ S D T R+WD+
Sbjct: 262 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 321
Query: 170 -KTVSP---ADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGVNWAAFHP 214
T+S A +R + G D ++ L H + V HP
Sbjct: 322 VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP 381
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
SG+ D +K W+ + + L GH ++ + ++ ++VS +++ ++ +
Sbjct: 382 RHYTFASGSPDN-IKQWKFPDGSF--IQNLSGHNAIINTLTVNS-DGVLVSGADNGTMHL 437
Query: 275 WDVTKRTGVQTFRREH 290
WD RTG F+R H
Sbjct: 438 WDW--RTGYN-FQRVH 450
Score = 205 (77.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 57/234 (24%), Positives = 105/234 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T RIW+ +++ + L
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 325
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMN----T 186
+GH + V E +++ S D T+R+WD+ A + + T++ +R ++ T
Sbjct: 326 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 385
Query: 187 DLFGGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N + ++VSGAD+ + LW
Sbjct: 386 FASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 438
Score = 167 (63.8 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 62/252 (24%), Positives = 104/252 (41%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R + W V+ S D+TI+IW+ S LTGH
Sbjct: 189 WHPPWKLYR---VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 245
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + S D+ V+ WD+ A+ + P D+L
Sbjct: 246 STVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 305
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
S+ +T V + L GH V P I++G+ D ++LW + K
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT-R 364
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V V+ H + S S D +I+ W + +Q + L +
Sbjct: 365 V-TLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNS 422
Query: 301 EMNLLAAGHDSG 312
+ +L +G D+G
Sbjct: 423 D-GVLVSGADNG 433
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P I+ H I+LWD G H VR V H F S
Sbjct: 329 TNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFAS 388
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
G D IK W + + L GH I T+ + + +VS +D+ T+ +W+W++
Sbjct: 389 GSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNF 446
Query: 125 -RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW 162
R +V G + +F E +++A D+T++V+
Sbjct: 447 QRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 488
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 63/256 (24%), Positives = 109/256 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V P++
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D+ ++ W+ + I GH V HP D++V+ S D T R+WD+
Sbjct: 263 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 322
Query: 170 -KTVSP---ADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGVNWAAFHP 214
T+S A +R + G D ++ L H + V HP
Sbjct: 323 VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP 382
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
SG+ D +K W+ + + L GH ++ + ++ ++VS +++ ++ +
Sbjct: 383 RHYTFASGSPDN-IKQWKFPDGSF--IQNLSGHNAIINTLTVNS-DGVLVSGADNGTMHL 438
Query: 275 WDVTKRTGVQTFRREH 290
WD RTG F+R H
Sbjct: 439 WDW--RTGYN-FQRVH 451
Score = 205 (77.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 57/234 (24%), Positives = 105/234 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T RIW+ +++ + L
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 326
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMN----T 186
+GH + V E +++ S D T+R+WD+ A + + T++ +R ++ T
Sbjct: 327 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 386
Query: 187 DLFGGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N + ++VSGAD+ + LW
Sbjct: 387 FASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 439
Score = 167 (63.8 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 62/252 (24%), Positives = 104/252 (41%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R + W V+ S D+TI+IW+ S LTGH
Sbjct: 190 WHPPWKLYR---VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 246
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + S D+ V+ WD+ A+ + P D+L
Sbjct: 247 STVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 306
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
S+ +T V + L GH V P I++G+ D ++LW + K
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT-R 365
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V V+ H + S S D +I+ W + +Q + L +
Sbjct: 366 V-TLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNS 423
Query: 301 EMNLLAAGHDSG 312
+ +L +G D+G
Sbjct: 424 D-GVLVSGADNG 434
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P I+ H I+LWD G H VR V H F S
Sbjct: 330 TNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFAS 389
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
G D IK W + + L GH I T+ + + +VS +D+ T+ +W+W++
Sbjct: 390 GSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNF 447
Query: 125 -RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW 162
R +V G + +F E +++A D+T++V+
Sbjct: 448 QRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 489
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 63/256 (24%), Positives = 109/256 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V P++
Sbjct: 204 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 263
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
S +D+ ++ W+ + I GH V HP D++V+ S D T R+WD+
Sbjct: 264 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 323
Query: 170 -KTVSP---ADDILRLSQMNTDLF-GGVDAVVKY----------VLEGHDRGVNWAAFHP 214
T+S A +R + G D ++ L H + V HP
Sbjct: 324 VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP 383
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
SG+ D +K W+ + + L GH ++ + ++ ++VS +++ ++ +
Sbjct: 384 RHYTFASGSPDN-IKQWKFPDGSF--IQNLSGHNAIINTLTVNS-DGVLVSGADNGTMHL 439
Query: 275 WDVTKRTGVQTFRREH 290
WD RTG F+R H
Sbjct: 440 WDW--RTGYN-FQRVH 452
Score = 205 (77.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 57/234 (24%), Positives = 105/234 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 208 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 267
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T RIW+ +++ + L
Sbjct: 268 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 327
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMN----T 186
+GH + V E +++ S D T+R+WD+ A + + T++ +R ++ T
Sbjct: 328 SGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYT 387
Query: 187 DLFGGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N + ++VSGAD+ + LW
Sbjct: 388 FASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 440
Score = 167 (63.8 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 62/252 (24%), Positives = 104/252 (41%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R + W V+ S D+TI+IW+ S LTGH
Sbjct: 191 WHPPWKLYR---VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 247
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + S D+ V+ WD+ A+ + P D+L
Sbjct: 248 STVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 307
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
S+ +T V + L GH V P I++G+ D ++LW + K
Sbjct: 308 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKT-R 366
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V V+ H + S S D +I+ W + +Q + L +
Sbjct: 367 V-TLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNS 424
Query: 301 EMNLLAAGHDSG 312
+ +L +G D+G
Sbjct: 425 D-GVLVSGADNG 435
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P I+ H I+LWD G H VR V H F S
Sbjct: 331 TNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFAS 390
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
G D IK W + + L GH I T+ + + +VS +D+ T+ +W+W++
Sbjct: 391 GSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNF 448
Query: 125 -RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW 162
R +V G + +F E +++A D+T++V+
Sbjct: 449 QRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 490
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 172 (65.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 61/260 (23%), Positives = 116/260 (44%)
Query: 65 LFVSGGDDYKIKVWNY-KMHR--CLFTLLGHLDYIRTVQFHH-EYPWIVSASDDQTIRIW 120
+FVS D I+VW K R C+ LGH + V + ++V++S D TI++W
Sbjct: 400 MFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVW 459
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
N LT + + P+ + A + + DI ++ VSP D ++
Sbjct: 460 NIPES-----LTSKAKAALISG--PE---TLHAQMTERGHDKDINSV---AVSPNDKLIA 506
Query: 181 LSQMN--TDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
+ L+ D + V GH RG+ F P ++ + + D +KLW + +
Sbjct: 507 TGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSC 566
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS 298
+ T GH +V ++F ++ ++S D +++W + V+T D+ W L +
Sbjct: 567 --LKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHT 624
Query: 299 HPEMNLLA-AGHDSGMIVFK 317
+ + +++ A DS + ++K
Sbjct: 625 NKQDDMVVTASSDSSITLWK 644
Score = 169 (64.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 38/136 (27%), Positives = 66/136 (48%)
Query: 32 VIQLWDYRMGTLIDRFDE-HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
+++ W++R + + H PV + F + L +GG D IK+W+ C L
Sbjct: 90 LLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLK 149
Query: 91 GHLDYIRTVQFHHEYP--WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
G + V+FH + + S+S D IRIW+ S C++VL GH V +F +
Sbjct: 150 GSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGN 209
Query: 149 LVVSASLDQTVRVWDI 164
++S+ D+ VW++
Sbjct: 210 TLISSGRDKICMVWNL 225
Score = 142 (55.0 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 31/138 (22%), Positives = 63/138 (45%)
Query: 34 QLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHL 93
+LW +L+ F H + V F + + D +K+W + CL T GH
Sbjct: 515 KLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHD 574
Query: 94 DYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSA 153
+ + F ++S D +++W ++ C+ L GH + + ++D+VV+A
Sbjct: 575 ASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTA 634
Query: 154 SLDQTVRVW-DIGALRKK 170
S D ++ +W D+ + ++
Sbjct: 635 SSDSSITLWKDVTEIEQE 652
Score = 139 (54.0 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 37 DYRMGTLIDRFDEHDGP-VRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG-HLD 94
D G L+ ++ D + + V+G +K WN++ +RC+ T H+
Sbjct: 52 DVETGALLHSLEQDDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIA 111
Query: 95 YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV--VS 152
+ T+ F + + D TI+IW+ + C L G + V FHP + S
Sbjct: 112 PVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFS 171
Query: 153 ASLDQTVRVWDIGALRKKTVSPAD 176
+S+D +R+WD+ + K V+ D
Sbjct: 172 SSMDYKIRIWDLNS--SKCVAVLD 193
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 24 ILA-SLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
ILA S G ++LW + + + F+ HD V + F +SGG D +K+W K
Sbjct: 546 ILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKT 605
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+ C+ TL GH D I + + + +V+AS D +I +W
Sbjct: 606 NECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 43/175 (24%), Positives = 78/175 (44%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH I +V I + S D+ ++W+ + + V TGH + C F P + ++
Sbjct: 488 GHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQIL 547
Query: 151 VSASLDQTVRVW---DIGALRKKTVSPAD-DILRLSQMN--TDLF-GGVDAVVKY----- 198
++S D T+++W D L KT D +L++ ++ T L GG D ++K
Sbjct: 548 ATSSADGTLKLWGLQDFSCL--KTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKT 605
Query: 199 -----VLEGHDRGVNWAAFHPTLP--LIVSGADDRQVKLWR-MNETKAWEVDTLR 245
L+GH+ + W H ++V+ + D + LW+ + E + E R
Sbjct: 606 NECVKTLDGHEDKI-WG-LHTNKQDDMVVTASSDSSITLWKDVTEIEQEEAQAKR 658
Score = 116 (45.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHK--SQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
I++WD G V V FH S+ S DYKI++W+ +C+ L
Sbjct: 134 IKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLD 193
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
GH + ++ F + ++S+ D+ +WN ++R I +
Sbjct: 194 GHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTI 234
Score = 94 (38.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 199 VLEGHDRGV-NWAAFHPTLPLIVSGADDRQVKLWRMNET-KAWEVDTLRGHMNNVSCVMF 256
+L GH + F L + VS A D+ +++WRMN+ + V GH + V V
Sbjct: 381 ILYGHTETILALDVFRKGL-MFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSC 439
Query: 257 -HAKQDIIVSNSEDKSIRVWDV 277
K+ +V++S+D +I+VW++
Sbjct: 440 SRLKESFVVTSSQDCTIKVWNI 461
Score = 68 (29.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
IV + Q+K++ ++ T ++ L GH + + K + VS ++DKSIRVW +
Sbjct: 360 IVVATNSPQLKVFELS-TSHCQI--LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMN 416
Query: 279 K 279
K
Sbjct: 417 K 417
Score = 43 (20.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
VL+GH V AF ++S D+ +W +
Sbjct: 191 VLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNL 225
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 207 (77.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 56/223 (25%), Positives = 99/223 (44%)
Query: 23 WILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
W I++WD G L H VRG+ P S G+D +K W+ +
Sbjct: 177 WFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLET 236
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
++ + GHL + ++ H +V+A D R+W+ ++R + VL+GH V +
Sbjct: 237 NKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLA 296
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTDLF----GGVDAVVK 197
+ VV+ S+D T+R+WD+ A + T++ +R ++ D F G D +
Sbjct: 297 VQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKH 356
Query: 198 YVL---------EGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
+ EGH+ VN + + ++ SGAD+ + W
Sbjct: 357 WKFPEGAFMGNFEGHNAIVNTLSINSD-NVMFSGADNGSMCFW 398
Score = 193 (73.0 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 60/250 (24%), Positives = 107/250 (42%)
Query: 42 TLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
TL+ H G VR V F +G D IK+W+ TL GH+ +R +
Sbjct: 154 TLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
+P++ S +D+ ++ W+ ++ I GH V HP D++V+A D RV
Sbjct: 214 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 162 WDIGALRKKTVSPA--DDILRLSQMNTD---LFGGVDAVVKY----------VLEGHDRG 206
WD+ + V + L+ D + G +D+ ++ L H +
Sbjct: 274 WDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKT 333
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V + HP SG+ D +K W+ E A+ + GH V+ + ++ +++ S
Sbjct: 334 VRALSLHPDEFTFASGSSDN-IKHWKFPEG-AF-MGNFEGHNAIVNTLSINS-DNVMFSG 389
Query: 267 SEDKSIRVWD 276
+++ S+ WD
Sbjct: 390 ADNGSMCFWD 399
Score = 184 (69.8 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+GL+ + P++ + +++ WD +I + H V + H + + V+ G
Sbjct: 208 VRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGR 267
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D +VW+ + + + L GH + ++ P +V+ S D TIR+W+ + ++ L
Sbjct: 268 DAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTL 327
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLSQMNTD-- 187
T H V S HP E S S D ++ W GA + I+ +N+D
Sbjct: 328 THHKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGN-FEGHNAIVNTLSINSDNV 385
Query: 188 LFGGVD 193
+F G D
Sbjct: 386 MFSGAD 391
Score = 176 (67.0 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 54/203 (26%), Positives = 90/203 (44%)
Query: 122 WQSR-TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDI 178
W + T + V++GH +V C P + + D+T+++WD+ G L+ +
Sbjct: 149 WHAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATV 208
Query: 179 --LRLSQMNTDLFG-GVDAVVK-YVLE---------GHDRGVNWAAFHPTLPLIVSGADD 225
L +S + LF G D +VK + LE GH GV HPTL ++V+ D
Sbjct: 209 RGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRD 268
Query: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQT 285
++W M + V L GH + V+ + +V+ S D +IR+WD+ + T
Sbjct: 269 AVARVWDMRTRQ--NVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTT 326
Query: 286 FRREHDRFWILASHPEMNLLAAG 308
L+ HP+ A+G
Sbjct: 327 LTHHKKTVRALSLHPDEFTFASG 349
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 211 (79.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 66/249 (26%), Positives = 113/249 (45%)
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWI-VSASDDQTIRIWNWQSR---TCISV 130
+KV+ + C L GH D + + + W+ S + DQ++RIW C++
Sbjct: 359 LKVFELQTSACQI-LHGHTDIVLALDVFRK-GWLFASCAKDQSVRIWRMNKAGQVMCVAQ 416
Query: 131 LTGHNHYV--MCASFHPKEDLVVSASLDQTVRVWDIG-ALRKKTVSPADDILRLSQMNTD 187
+GH H V +C S KE +V+ S D TV++W + AL K +P + + L T
Sbjct: 417 GSGHTHSVGTVCCS-RLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQ 475
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
HD+ +N A P L+ +G+ DR KLW + + + V GH
Sbjct: 476 -------------RCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGV--FSGH 520
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN--LL 305
+ CV F ++ + S D +I++W + + ++TF HD + + LL
Sbjct: 521 RRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG-HDASVLKVAFVSRGTQLL 579
Query: 306 AAGHDSGMI 314
++G D G++
Sbjct: 580 SSGSD-GLV 587
Score = 157 (60.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 36 WDYRMGTLIDRFDE-HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD 94
W ++ G++ + H PV + F + L +GG D ++VW+ H G
Sbjct: 93 WAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPG 152
Query: 95 YIRTVQFHHEYPWIV--SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+ V FH + ++ S++ D IR+W+ Q R+C++VLT H V +F ++S
Sbjct: 153 VVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLS 212
Query: 153 ASLDQTVRVWDIGALRKKTVSP 174
+ D+ +WD+ + + P
Sbjct: 213 SGRDKICIIWDLQSCQATRTVP 234
Score = 153 (58.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 60/260 (23%), Positives = 112/260 (43%)
Query: 65 LFVSGGDDYKIKVWNYKMH---RCLFTLLGHLDYIRTVQFHH-EYPWIVSASDDQTIRIW 120
LF S D +++W C+ GH + TV + ++V+ S D T+++W
Sbjct: 390 LFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLW 449
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
+ +S T ++ P +++ A Q DI ++ ++P D +L
Sbjct: 450 PLP-KALLSKNTAPDN-------GP---ILLQAQTTQRCHDKDINSV---AIAPNDKLLA 495
Query: 181 L-SQMNT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
SQ T L+ + V GH RG+ F P ++ + + D +KLW + +
Sbjct: 496 TGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSC 555
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL-A 297
+ T GH +V V F ++ ++S+ D +++W + V+T D+ W L
Sbjct: 556 --LKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHC 613
Query: 298 SHPEMNLLAAGHDSGMIVFK 317
S + + L DS +I++K
Sbjct: 614 SRLDDHALTGASDSRVILWK 633
Score = 132 (51.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 31/115 (26%), Positives = 52/115 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
HD + V + L +G D K+W + L GH + VQF +
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLA 537
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
+AS D TI++W Q +C+ GH+ V+ +F + ++S+ D V++W I
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTI 592
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 198 (74.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 46/177 (25%), Positives = 88/177 (49%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDE-HDGPVRGVHFHK 61
T + + V + + W+++ G+I++W +++ D H +R + F
Sbjct: 129 TLMQAHDSAVTTMKYSHDSDWMISGDADGMIKIWQPNF-SMVKEIDAAHTESIRDMAFSS 187
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ FV+ DD +K+WN+ + L GH +++ +H E I SAS D +++W+
Sbjct: 188 NDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWD 247
Query: 122 WQSRTCISVLTGHNHYVMCASFHP-KEDLVVSASLDQTVRVWDIGALRKKTVSPADD 177
+S CIS + H V+ F P K +L+++ S D++ RV+DI K+ + D+
Sbjct: 248 PRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRDE 304
Score = 185 (70.2 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 3 TKF-ETKSNRVK----GLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGV 57
+KF SN+VK + + + ++ + +SG LW+ T HD V +
Sbjct: 82 SKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTM 141
Query: 58 HFHKSQPLFVSGGDDYKIKVW--NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQ 115
+ +SG D IK+W N+ M + + H + IR + F V+ SDD
Sbjct: 142 KYSHDSDWMISGDADGMIKIWQPNFSMVKEIDA--AHTESIRDMAFSSNDSKFVTCSDDN 199
Query: 116 TIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
++IWN+ + VL+GH+ V +HP+ L+ SAS D V++WD
Sbjct: 200 ILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWD 247
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 57/242 (23%), Positives = 99/242 (40%)
Query: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
I +Q+ E +V A+ +WN S T +++ H+ V + D ++S
Sbjct: 96 IPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTMKYSHDSDWMISGDA 155
Query: 156 DQTVRVWDIGALRKKTVSPA--DDILRLSQMNTD---LFGGVDAVVKY----------VL 200
D +++W K + A + I ++ + D + D ++K VL
Sbjct: 156 DGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVL 215
Query: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH-AK 259
GH V +HP + LI S + D VKLW + ++ + V F K
Sbjct: 216 SGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNC--ISSILKFKHTVLKTRFQPTK 273
Query: 260 QDIIVSNSEDKSIRVWDVT-KRTGVQTFRREHDRFWILASHP--EMNLLAAGHDSGMIVF 316
+++++ S+DKS RV+D+ + R E D + L HP E A +D + F
Sbjct: 274 GNLLMAISKDKSCRVFDIRYSMKELMCVRDETD-YMTLEWHPINESMFTLACYDGSLKHF 332
Query: 317 KL 318
L
Sbjct: 333 DL 334
Score = 55 (24.4 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
DL ++ + + HD+ + +++P + + A DR ++ W T+A +D
Sbjct: 333 DLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFW----TRARPID 384
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 202 (76.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 54/177 (30%), Positives = 80/177 (45%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
S+ V+ + S + L+ G ++LWD G RF H V V F VS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Query: 69 GGDDYKIKVWNYKMHRCLFTLL----GHLDYIRTVQFHHE--YPWIVSASDDQTIRIWNW 122
D IK+WN + C +T+ GH D++ V+F P IVSAS D+T+++WN
Sbjct: 123 ASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
+ S L GH YV + P L S D V +WD+ +K A+ ++
Sbjct: 182 SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVI 238
Score = 148 (57.2 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 51/188 (27%), Positives = 82/188 (43%)
Query: 24 ILASLHSGVIQLW-----DYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVW 78
+ AS +I LW D G R H V V +SG D ++++W
Sbjct: 32 VSASRDKSII-LWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTG---HN 135
+ +GH + +V F + IVSAS D+TI++WN ++ G H
Sbjct: 91 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHR 150
Query: 136 HYVMCASFHPK--EDLVVSASLDQTVRVWDIGALR-KKTVSPADDILRLSQMNTD----L 188
+V C F P + +VSAS D+TV+VW++ + + T++ + ++ D
Sbjct: 151 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA 210
Query: 189 FGGVDAVV 196
GG D VV
Sbjct: 211 SGGKDGVV 218
Score = 142 (55.0 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 187 DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLR 245
DL GV + ++V GH + V AF IVS + DR +KLW + E K +
Sbjct: 91 DLAAGV-STRRFV--GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE 147
Query: 246 GHMNNVSCVMF--HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
GH + VSCV F + Q IVS S DK+++VW+++ T +A P+ +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 304 LLAAGHDSGMIV-FKLERERPAFAVSGDSLFYA 335
L A+G G+++ + L + +++ +S+ +A
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSLEANSVIHA 240
Score = 88 (36.0 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
T+ H D + + + IVSAS D++I +W + V LTGH+H+V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 142 SFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS 182
+S S D +R+WD+ G ++ V D+L ++
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVA 112
Score = 40 (19.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 467 LCRA-EDRVVIFDLQQRLVLGDLQ 489
LC A E + I+DL+ + ++ DL+
Sbjct: 250 LCAATEHGIKIWDLESKSIVEDLK 273
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 143 (55.4 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV + L +G D +K+W C +L H D + ++F +
Sbjct: 589 HKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFF 648
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
+A D I+ W+ I L GH+ + C + P D VVSAS D+++R+W+
Sbjct: 649 TAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 134 (52.2 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 31/139 (22%), Positives = 60/139 (43%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I+++ G F+ H V + + + SG D + +W+ L+ L
Sbjct: 87 GAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLK 146
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH D + F E +V++ D ++ W+ ++ C + GH V +E +
Sbjct: 147 GHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRL 206
Query: 151 VSASLDQTVRVWDIGALRK 169
++ + D +R WDI L++
Sbjct: 207 ITGAADSELRAWDIAYLQE 225
Score = 131 (51.2 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 173 SPADDILRLSQMN-TDLFGGVDAVVKYV-LEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
SP +L +S ++ T VD + ++ L GH V LI +G+ DR VK+
Sbjct: 557 SPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKI 616
Query: 231 WRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
W ++ +L H ++V + F K + + +D I+ WD K +QT H
Sbjct: 617 WGLDFGDCHR--SLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHH 674
Query: 291 DRFWILASHPEMN-LLAAGHDSGMIVFKLERE 321
W LA P + +++A HD + +++ RE
Sbjct: 675 QEIWCLAVSPSGDYVVSASHDKSLRLWERTRE 706
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 43/190 (22%), Positives = 82/190 (43%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMH 83
++ +G +QL+D G L++ HDG + + Q FV+GG D +K W++++
Sbjct: 468 VVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELV 527
Query: 84 RCLFTLLGHLDYIRT--VQFHHEYPWIVSASD---------DQTIRIWNWQSRTCISVLT 132
+ L +T +Q + ++ + D D T++I+ + L
Sbjct: 528 TDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLY 587
Query: 133 GHNHYVMCASFHPKEDLVVSASLDQTVRVW--DIGALRKKTVSPADDILRLSQM-NTDLF 189
GH V+C L+ + S D+ V++W D G + + D ++ L + + LF
Sbjct: 588 GHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLF 647
Query: 190 --GGVDAVVK 197
G D +K
Sbjct: 648 FTAGKDHKIK 657
Score = 121 (47.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 29/93 (31%), Positives = 42/93 (45%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L HD V F P L + D ++K W + K + TL GH + C+
Sbjct: 628 LFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQW--DADKFEHIQTLEGHHQEIWCLAVSPS 685
Query: 260 QDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDR 292
D +VS S DKS+R+W+ T+ + RE R
Sbjct: 686 GDYVVSASHDKSLRLWERTREPLILEEERELQR 718
Score = 103 (41.3 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 29/116 (25%), Positives = 59/116 (50%)
Query: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
T+ GH +RT+ F + ++SA+ + +++IWN + CI + Y +C+ F P +
Sbjct: 409 TIGGHRSDVRTLSFSSDNIAVLSAAAE-SVKIWNRSTLQCIRTMPCE--YALCSFFVPGD 465
Query: 148 DLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVDAVVKY 198
VV + ++++D+ + +T++ D L ++ D + GG D VK+
Sbjct: 466 RQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKF 521
Score = 86 (35.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G +D I+V++ T GH + ++++ + S S D + IW+ + + +
Sbjct: 83 GYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGL 142
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
L GH V A F + +L+V++ D V+ WD+
Sbjct: 143 YRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDL 178
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/156 (20%), Positives = 61/156 (39%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H VR + F +S + +K+WN +C+ T+ +Y F +V
Sbjct: 413 HRSDVRTLSFSSDNIAVLSAAAE-SVKIWNRSTLQCIRTM--PCEYALCSFFVPGDRQVV 469
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
+ +++++ S + + H+ + S P + V+ D+ V+ WD +
Sbjct: 470 IGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTD 529
Query: 170 KTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDR 205
K + RLS T + +D V YV D+
Sbjct: 530 KNSTQK----RLSVKQTRILQ-LDEDVLYVCYSPDQ 560
Score = 50 (22.7 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 20/124 (16%), Positives = 48/124 (38%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+ + GH V +F ++S A + VK+W + + + T+ C F
Sbjct: 407 RITIGGHRSDVRTLSFSSDNIAVLSAAAE-SVKIWNRSTLQC--IRTMP--CEYALCSFF 461
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMIV 315
+V ++ +++++D+ ++T W ++ P+ + G D +
Sbjct: 462 VPGDRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKF 521
Query: 316 FKLE 319
+ E
Sbjct: 522 WDFE 525
Score = 44 (20.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD---VTKRTGVQ 284
++T+ H + + Q V+ DK+++ WD VT + Q
Sbjct: 488 LETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQ 534
Score = 40 (19.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 11/63 (17%), Positives = 25/63 (39%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
F +R ++ S +++ WD H V G+ + ++G D +++
Sbjct: 157 FLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELR 216
Query: 77 VWN 79
W+
Sbjct: 217 AWD 219
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 198 (74.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 64/256 (25%), Positives = 112/256 (43%)
Query: 56 GVHFHKSQPLFVSGGDDYKIKVWNYKMHRC--LFTLLGHLDYIRTVQFHHEYPWIVSASD 113
G + ++ V+G D +KVW ++ R ++L GH + +V H P S+S
Sbjct: 25 GTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 84
Query: 114 DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV- 172
D IR+W+ ++ I + +F P + + + V ++ + + +K+
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 144
Query: 173 -SPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPL 218
+ IL ++ + G +D ++ + LEGH + F P L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
+V+ +DD +K++ + TL GH + V V F VS+S DKS++VWDV
Sbjct: 205 LVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 279 KRTGVQTFRREHDRFW 294
RT V TF D+ W
Sbjct: 263 TRTCVHTFFDHQDQVW 278
Score = 170 (64.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 34/147 (23%), Positives = 70/147 (47%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
+T+ + +++ ++ + G+I ++D G L+ + H P+R + F L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ V F + VS+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVS 152
TC+ H V ++ +VS
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVS 291
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L+F ++ H G + ++ G D + + + SG D
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
I +++ + L TL GH IR++ F + +V+ASDD I+I++ Q L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+V+ +F P + VS+S D++V+VWD+G
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 181 (68.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYK-- 81
+ A +++LWD + G ++R++ H V V F SG D +K+W+
Sbjct: 430 VAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 489
Query: 82 --MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
RC T GH D++ +V F + W++S S D++++ W+ ++ T +L GH + V+
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVI 549
Query: 140 CASFHPKED---LVVSASLDQTVRVW 162
+ PK + + + S D R+W
Sbjct: 550 SVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 162 (62.1 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 35/164 (21%), Positives = 74/164 (45%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
++ + F ++ +++WD + F H+ + + + VSG
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 72 DYKIKVWNYKMHRCLFTL----LGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
D K K+W+ + +C FTL +G + + +V + + + S D +R+W+ Q+
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT 171
+ GH V +F P + S SLD+++++WD+ R ++
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRS 493
Score = 153 (58.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 41/160 (25%), Positives = 76/160 (47%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHFHKSQP---LFV 67
+ L + S +I++ ++WD G +E GP GV P L
Sbjct: 372 IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVA 431
Query: 68 SGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW---QS 124
+G D +++W+ + L GHLD + +V F + + S S D+++++W+ +S
Sbjct: 432 AGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRS 491
Query: 125 RT-CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
R+ C + GH +V+ +F P ++S S D++V+ WD
Sbjct: 492 RSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 147 (56.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 42/140 (30%), Positives = 64/140 (45%)
Query: 34 QLWDYRMGTLIDRF---DEHDGP--VRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFT 88
Q++D G + F E DG +R V F +G +D +KVW+ + T
Sbjct: 305 QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHT 364
Query: 89 LLGH-LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL----TGHNHYVMCASF 143
GH LD I ++ + + +IVS S D+ +IW+ + C L G + V +
Sbjct: 365 FYGHELD-IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAM 423
Query: 144 HPKEDLVVSASLDQTVRVWD 163
P LV + SLD VR+WD
Sbjct: 424 SPDGRLVAAGSLDNIVRLWD 443
Score = 112 (44.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 176 DDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE 235
D+I+RL T F + +Y EGH V AF P + SG+ D+ +KLW ++
Sbjct: 436 DNIVRLWDAQTGYF-----LERY--EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSG 488
Query: 236 TKAWEV--DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD 276
+++ T GH + V V F ++S S+D+S++ WD
Sbjct: 489 SRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 207 (77.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 59/234 (25%), Positives = 105/234 (44%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++ W + I++WD G L H VRGV P S G+
Sbjct: 209 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGE 268
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++K W+ + ++ + GHL + + H +V+ S D T RIW+ +++ + L
Sbjct: 269 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTL 328
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK-TVSPADDILRLSQMN----T 186
+GH + V E VV+ S D T+R+WD+ A + + T++ +R ++ T
Sbjct: 329 SGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYT 388
Query: 187 DLFGGVDAVVKYV---------LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
G D + ++ L GH+ +N + ++VSGAD+ + LW
Sbjct: 389 FASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 441
Score = 205 (77.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 62/256 (24%), Positives = 109/256 (42%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H G VR + FV+G D IK+W+ + +L GH+ +R V P++
Sbjct: 205 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLF 264
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI----- 164
S +D+ ++ W+ + I GH V HP D++V+ S D T R+WD+
Sbjct: 265 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 324
Query: 165 --------GALRKKTVSPADDILRLSQMNTD--LFGGVDAVVKYVLEGHDRGVNWAAFHP 214
A+ A+ + +T L+ V + L H + V HP
Sbjct: 325 VHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHP 384
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
SG+ D +K W+ + + L GH ++ + ++ ++VS +++ ++ +
Sbjct: 385 RHYTFASGSPDN-IKQWKFPDGNF--IQNLSGHNAIINTLTVNS-DGVLVSGADNGTMHL 440
Query: 275 WDVTKRTGVQTFRREH 290
WD RTG F+R H
Sbjct: 441 WDW--RTGYN-FQRVH 453
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 62/252 (24%), Positives = 103/252 (40%)
Query: 78 WN--YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHN 135
W+ +K++R + GHL ++R + W V+ S D+TI+IW+ S LTGH
Sbjct: 192 WHPPWKLYR---VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHI 248
Query: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKKTVSPADDIL-RL 181
V + + S D+ V+ WD+ A+ + P D+L
Sbjct: 249 STVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 308
Query: 182 SQMNTDLFGGVDAVVK-YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
S+ +T V + L GH V P +V+G+ D ++LW + K
Sbjct: 309 SRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKT-R 367
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL H +V V+ H + S S D +I+ W +Q + L +
Sbjct: 368 V-TLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLTVNS 425
Query: 301 EMNLLAAGHDSG 312
+ +L +G D+G
Sbjct: 426 D-GVLVSGADNG 436
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 41/162 (25%), Positives = 69/162 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V + + P ++ H I+LWD G H VR V H F S
Sbjct: 332 TNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFAS 391
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS---- 124
G D IK W + + L GH I T+ + + +VS +D+ T+ +W+W++
Sbjct: 392 GSPD-NIKQWKFPDGNFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNF 449
Query: 125 -RTCISVLTGH---NHYVMCASFHPKEDLVVSASLDQTVRVW 162
R +V G + F E +++A D+T++V+
Sbjct: 450 QRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTIKVY 491
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 188 (71.2 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 45/152 (29%), Positives = 70/152 (46%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
I+ WD T + H PV V F SG D ++W++ L GH
Sbjct: 366 IRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGH 425
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
L + V+FH ++ + S D+T+R+W+ Q + + TGH V+ SF P + S
Sbjct: 426 LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLAS 485
Query: 153 ASLDQTVRVWDI--GALRKKTVSPADDILRLS 182
A DQ +++WD+ G L K+ D I L+
Sbjct: 486 AGEDQRLKLWDLASGTLFKELRGHTDSITSLA 517
Score = 188 (71.2 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 41/148 (27%), Positives = 69/148 (46%)
Query: 29 HSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFT 88
H +LW + + + H V V FH + +G D +++W+ + +
Sbjct: 404 HDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 463
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
GH + ++ F ++ SA +DQ +++W+ S T L GH + +F P
Sbjct: 464 FTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSG 523
Query: 149 LVVSASLDQTVRVWDIGALRKKTVSPAD 176
L+ SAS+D +VRVWDI + T PAD
Sbjct: 524 LIASASMDNSVRVWDIRSTCCNT--PAD 549
Score = 170 (64.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 55/204 (26%), Positives = 90/204 (44%)
Query: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
L GH + + +F + ++S S+D +IR W+ S T + GH + V P
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 149 LVVSASLDQTVRVWDIGA---LRKKTVSPAD-DILRLSQMNTDLF-GGVDAVVKY----- 198
S S D+T R+W LR AD D ++ + L G D V+
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 199 -----VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
+ GH V +F P + S +D+++KLW + ++ LRGH ++++
Sbjct: 458 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK--ELRGHTDSITS 515
Query: 254 VMFHAKQDIIVSNSEDKSIRVWDV 277
+ F +I S S D S+RVWD+
Sbjct: 516 LAFSPDSGLIASASMDNSVRVWDI 539
Score = 159 (61.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 53/211 (25%), Positives = 80/211 (37%)
Query: 41 GTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQ 100
GT + H GPV F +S +D I+ W+ GH + V
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
+ S S D+T R+W++ + + GH V C FHP + + + S D+TVR
Sbjct: 392 ISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 161 VWDI--GALRKKTVSPADDILRLSQMNTDLF---GGVDAVVKY----------VLEGHDR 205
+W G + +L LS + G D +K L GH
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD 511
Query: 206 GVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
+ AF P LI S + D V++W + T
Sbjct: 512 SITSLAFSPDSGLIASASMDNSVRVWDIRST 542
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
+ FH ++ ++LW + G + F H GPV + F + S G+D +
Sbjct: 432 VKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQR 491
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
+K+W+ L GH D I ++ F + I SAS D ++R+W+ +S C
Sbjct: 492 LKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 544
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 56/225 (24%), Positives = 93/225 (41%)
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVS-----PADDILR 180
T + +L GH V F ++S S D ++R WD+G+ + P D+
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDV-D 391
Query: 181 LSQMNTDLFGGV-DAVVK-------YVLE---GHDRGVNWAAFHPTLPLIVSGADDRQVK 229
+S + G D + Y L GH V+ FHP + +G+ D+ V+
Sbjct: 392 ISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 230 LWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRRE 289
LW + + + T GH V + F + S ED+ +++WD+ T + R
Sbjct: 452 LWSAQQGNSVRLFT--GHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 290 HDRFWILASHPEMNLLA-AGHDSGMIVFKLER---ERPAFAVSGD 330
D LA P+ L+A A D+ + V+ + PA SG+
Sbjct: 510 TDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGE 554
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 50/242 (20%), Positives = 100/242 (41%)
Query: 85 CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS----VLTGHNHYVMC 140
C + + T + + + + D+ I++W+ +S+ S V T + C
Sbjct: 260 CFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHHVDTSRIR-LAC 318
Query: 141 ASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTDLFGGVDAVVKYV 199
+ +E+ + + + G + + ++ + +L S+ + + + + V
Sbjct: 319 DTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 378
Query: 200 L-EGHDRGVNWAA-FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
L +GH V W P SG+ DR +LW + T + + GH+ +V CV FH
Sbjct: 379 LYQGHAYPV-WDVDISPFSLYFASGSHDRTARLWSFDRT--YPLRIYAGHLADVDCVKFH 435
Query: 258 AKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLA-AGHDSGMIVF 316
+ + + S DK++R+W + V+ F L+ P LA AG D + ++
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Query: 317 KL 318
L
Sbjct: 496 DL 497
Score = 69 (29.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET--------KAWE-VDTLRGHMNN 250
L GH + AF P LI S + D V++W + T + E V G M+N
Sbjct: 506 LRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSN 565
Query: 251 VSCVMFHAKQDIIVS 265
V V F A ++V+
Sbjct: 566 VLSVQFMACNLLLVT 580
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 191 (72.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 51/177 (28%), Positives = 88/177 (49%)
Query: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF-VSGGDDYKIKVWNYK 81
+LA+ L+ G I++W+ + G L+ H VR + F S L VS D +++W+
Sbjct: 125 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 184
Query: 82 MH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
H + + L GHL ++ + + SA+ ++++ +W+ +S T I L GH V+
Sbjct: 185 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 244
Query: 141 ASFHPKEDLVVSASLDQTVRVWD------IGALRKKTVSPA-DDI-LRLSQMNTDLF 189
F P L+V+AS D V +WD + +L V PA DD + +S + + F
Sbjct: 245 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCF 301
Score = 59 (25.8 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
H + F P + + ADDR +++W + E K M N C F +
Sbjct: 292 HISSLRSVCFSPEGLYLATVADDRLLRIWAL-ELKT---PIAFAPMTNGLCCTFFPHGGV 347
Query: 263 IVSNSEDKSIRVW 275
I + + D ++ W
Sbjct: 348 IATGTRDGHVQFW 360
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 199 (75.1 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 66/279 (23%), Positives = 122/279 (43%)
Query: 56 GVHFHKSQPLFVSGGDDYKIKVWNYKMHRC--LFTLLGHLDYIRTVQFHHEYPWIVSASD 113
G + ++ V+G D +KVW ++ R ++L GH + +V H P S+S
Sbjct: 25 GTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 84
Query: 114 DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV- 172
D IR+W+ ++ I + +F P + + + V ++ + + +K+
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 144
Query: 173 -SPADDILRLSQMNTDLF---GGVDAVVK----------YVLEGHDRGVNWAAFHPTLPL 218
+ IL ++ + G +D ++ + LEGH + F P L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVT 278
+V+ +DD +K++ + TL GH + V V F VS+S DKS++VWDV
Sbjct: 205 LVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Query: 279 KRTGVQTFRREHDRFW-ILASHPEMNLLAAGHDSGMIVF 316
RT V TF D+ W + + +++ G D + ++
Sbjct: 263 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 190 (71.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 37/158 (23%), Positives = 76/158 (48%)
Query: 6 ETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPL 65
+T+ + +++ ++ + G+I ++D G L+ + H P+R + F L
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 66 FVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
V+ DD IK+++ + TL GH ++ V F + VS+S D+++++W+ +R
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 126 TCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
TC+ H V ++ +VS DQ + ++D
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
L+F ++ H G + ++ G D + + + SG D
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
I +++ + L TL GH IR++ F + +V+ASDD I+I++ Q L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIG 165
+V+ +F P + VS+S D++V+VWD+G
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 262
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
+L E + ++ L+F ++ + G I+++D + L H V V F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
FVS D +KVW+ C+ T H D + V+++ IVS DDQ I I+
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Query: 121 N 121
+
Sbjct: 302 D 302
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 54/263 (20%), Positives = 112/263 (42%)
Query: 32 VIQLWDYRMGTLIDRF--DEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL 89
++++W +R L ++ + H V V + P+ S D I++W+ + + + ++
Sbjct: 43 LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI 102
Query: 90 -LGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
G +D T+ F + ++ + + + I+ +S L +++ ++ P
Sbjct: 103 DAGPVD-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 149 LVVSASLDQTVRVWDIGA-------------LRKKTVSPADDILRLSQMN--TDLFGGVD 193
+ S ++D + ++DI +R T SP +L + + ++
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 194 AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
A + L GH V AF P VS + D+ VK+W + T+ V T H + V
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG-TRTC-VHTFFDHQDQVWG 279
Query: 254 VMFHAKQDIIVSNSEDKSIRVWD 276
V ++ IVS +D+ I ++D
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 191 (72.3 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 51/177 (28%), Positives = 88/177 (49%)
Query: 24 ILAS-LHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF-VSGGDDYKIKVWNYK 81
+LA+ L+ G I++W+ + G L+ H VR + F S L VS D +++W+
Sbjct: 127 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLN 186
Query: 82 MH-RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMC 140
H + + L GHL ++ + + SA+ ++++ +W+ +S T I L GH V+
Sbjct: 187 KHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVS 246
Query: 141 ASFHPKEDLVVSASLDQTVRVWD------IGALRKKTVSPA-DDI-LRLSQMNTDLF 189
F P L+V+AS D V +WD + +L V PA DD + +S + + F
Sbjct: 247 CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCF 303
Score = 59 (25.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 17/73 (23%), Positives = 29/73 (39%)
Query: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI 262
H + F P + + ADDR +++W + E K M N C F +
Sbjct: 294 HISSLRSVCFSPEGLYLATVADDRLLRIWAL-ELKT---PIAFAPMTNGLCCTFFPHGGV 349
Query: 263 IVSNSEDKSIRVW 275
I + + D ++ W
Sbjct: 350 IATGTRDGHVQFW 362
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 184 (69.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/302 (22%), Positives = 130/302 (43%)
Query: 49 EHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD------YIRTVQFH 102
EH V V F + +++ G + V++ + + LFTL Y+RT+ F
Sbjct: 311 EHPSVVCCVKFSNNGK-YLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFS 369
Query: 103 HEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
+ ++V+ ++D+ I++W+ ++ V +GH + F +VS S D+T R+W
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW 429
Query: 163 DI--GALRKK----------TVSPADDILRLSQMNTDL-FGGVDAVVKYVLEGHDRGVNW 209
D+ G K +SP D + + ++ + V + LEGH V
Sbjct: 430 DVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYS 489
Query: 210 AAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
AF P +++SG+ D+ +K+W + T++ + ++ + + D ++S +
Sbjct: 490 IAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPE--GICKATYTGHTDFVLSVAVS 547
Query: 270 KSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAV-S 328
R W G+ + +FW L + + L GH + +I + FA S
Sbjct: 548 PDSR-W------GLSGSKDRSMQFWDLQTG-QSYLTCQGHKNSVISVCFSPDGRQFASGS 599
Query: 329 GD 330
GD
Sbjct: 600 GD 601
Score = 172 (65.6 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 41/162 (25%), Positives = 76/162 (46%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++F +++ I+LWD + F H+ + + F + VSG
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D ++W+ + +C+ L + + + +I S DQ IR+W+ S T + L
Sbjct: 423 DRTARLWDVETGQCILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWS-VSGTLVERL 480
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVS 173
GH V +F P +++S SLD+T++VW++ A R +S
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLS 522
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/175 (25%), Positives = 74/175 (42%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
+ K E + N V ++ +I +I++W GTL++R + H V + F
Sbjct: 437 ILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSP 494
Query: 62 SQPLFVSGGDDYKIKVWNYKMHR------------CLFTLLGHLDYIRTVQFHHEYPWIV 109
+ +SG D IKVW + R C T GH D++ +V + W +
Sbjct: 495 DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGL 554
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
S S D++++ W+ Q+ GH + V+ F P S S D R+W I
Sbjct: 555 SGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 39/172 (22%), Positives = 74/172 (43%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F + L F +I++ +LWD G I + + +G V + +
Sbjct: 398 FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQ 456
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
G D I+VW+ + L GH + + ++ F + ++S S D+TI++W Q+
Sbjct: 457 FIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQA 515
Query: 125 -RT-----------CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
R+ C + TGH +V+ + P +S S D++++ WD+
Sbjct: 516 TRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDL 567
Score = 86 (35.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 193 DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
+ + K GH V A P +SG+ DR ++ W + +++ T +GH N+V
Sbjct: 527 EGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYL--TCQGHKNSVI 584
Query: 253 CVMFHAKQDIIVSNSEDKSIRVWDV 277
V F S S D R+W +
Sbjct: 585 SVCFSPDGRQFASGSGDLRARIWSI 609
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 212 (79.7 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 62/249 (24%), Positives = 111/249 (44%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP--LFVSGGDDYKIKVWNYKMHRCLFTLL 90
+++W+ G L+ +DEH V HF + L + D +K+W+ C T+
Sbjct: 682 VKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMF 741
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH + + +F + + S S D T+++W+ +S + ++ S P+ED+
Sbjct: 742 GHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLN--SEEPQEDME 799
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
V W R + A + + L ++T GG+ A + GH + +
Sbjct: 800 VIVKCCS----WSADGTR--IMVAAKNKIFLFDIHT---GGLLAEIH---TGHHSTIQYC 847
Query: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDK 270
F P L V V+LW M+ +V RGH++ V CVMF +++S+D+
Sbjct: 848 DFSPQNHLAVVALSQCCVELWNMDS--CLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQ 905
Query: 271 SIRVWDVTK 279
+IR+W+ K
Sbjct: 906 TIRLWETKK 914
Score = 167 (63.8 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
GG+D +++ +R + +GH +R +QF + ++S+SDD +I++WNWQS +
Sbjct: 980 GGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV 1039
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILR--LSQM 184
L H V K ++S S D TV++W I G + K V D +L +S
Sbjct: 1040 -FLQAHQETVKDFKLL-KNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPD 1097
Query: 185 NTDLFG-GVDAVVK----------YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
T D K + L GH V + F L+ +G D+ ++++W +
Sbjct: 1098 ATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNV 1157
Query: 234 N 234
+
Sbjct: 1158 S 1158
Score = 149 (57.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH I+ F + V A + +WN S ++ GH +V C F P
Sbjct: 839 GHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSF 898
Query: 151 VSASLDQTVRVWDIGALRKKT----------VSPADDILRLSQMNT---DLFGGVDAVVK 197
+++S DQT+R+W+ + K + V ++++ L+ N L G +
Sbjct: 899 LTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQID 958
Query: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
Y++E V+ P L I G +D V++ + + ++ + GH V + F
Sbjct: 959 YLIEAQ---VSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQ--SRIGHKKTVRHIQFT 1013
Query: 258 AKQDIIVSNSEDKSIRVWD 276
++S+S+D SI+VW+
Sbjct: 1014 DDGKTLISSSDDSSIQVWN 1032
Score = 142 (55.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/159 (21%), Positives = 68/159 (42%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+Q++ G + H+ V F + D K+K+WN + H
Sbjct: 640 LQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEH 699
Query: 93 LDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
+ + F + Y + +AS D +++W+ + C + + GH + V F P + L+
Sbjct: 700 SEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLL 759
Query: 151 VSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDL 188
S S D T+++WD+ A +K+++ L + D+
Sbjct: 760 ASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDM 798
Score = 47 (21.6 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 16/82 (19%), Positives = 32/82 (39%)
Query: 1 MLTKFET-KSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
+L + T + ++ F + + +L ++LW+ + H V V F
Sbjct: 832 LLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMF 891
Query: 60 HKSQPLFVSGGDDYKIKVWNYK 81
F++ DD I++W K
Sbjct: 892 SPDGSSFLTSSDDQTIRLWETK 913
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 462 GTGNLLCRAEDRVVIFDLQQRLVLGDLQTPF---VKYVVWS--NDMESVAL 507
GT ++ A++++ +FD+ +L ++ T ++Y +S N + VAL
Sbjct: 811 GT-RIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVAL 860
WARNING: HSPs involving 900 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 916 860 0.00083 122 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1150
No. of states in DFA: 623 (66 KB)
Total size of DFA: 450 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.55u 0.16s 69.71t Elapsed: 00:00:04
Total cpu time: 69.76u 0.17s 69.93t Elapsed: 00:00:04
Start: Tue May 21 05:47:25 2013 End: Tue May 21 05:47:29 2013
WARNINGS ISSUED: 2