BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002490
(916 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 1677 bits (4344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 801/903 (88%), Positives = 858/903 (95%), Gaps = 2/903 (0%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH KRPWILASLHSGVIQLWDYRMGTLIDRFDEH+GPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
SQPLFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTC+SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDI+R
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
L+QMN+DLFGGVDA+VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
Sbjct: 181 LTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVS VMFHAKQDIIVSNSEDKSIRVWD TKRTG+QTFRREHDRFWILA HP
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
EMNLLAAGHDSGMIVFKLERERPAFA+SGDSLFYAKDRFLRYYE+STQ+D+QVIPIRRPG
Sbjct: 301 EMNLLAAGHDSGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQRDSQVIPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
+ SLNQSPRTLSYSPTENAVLICSD+DGGSYELY+IPKDS+GR D VQDAK+G GGSA+F
Sbjct: 361 TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF 420
Query: 421 IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
IARNRFAVL+KS++QVLVKNLKNEVVKKS LPI DAIFYAGTGNLLCR+ED+VVIFDLQ
Sbjct: 421 IARNRFAVLEKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRLVLG+LQTPFV+YVVWS+DMESVALLSKH IIIASKKLV QCTLHETIRVKSGAWDDN
Sbjct: 481 QRLVLGELQTPFVRYVVWSSDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKN+AI I+ATEYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKLSLLRKRYDHVMSMI+NSQLCGQAMIAYLQQKGFPEVALHFV+DER RFNLALESGNI
Sbjct: 601 FKLSLLRKRYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
+AVASA +I+EKDHWYRLGVEALRQGN+GIVE+AYQ+TKNFERLSFLYLITGN+DKLSK
Sbjct: 661 SVAVASATQINEKDHWYRLGVEALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSK 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
++KIAEVKN+VMGQFHNALYLGDVKERVKILE+AGHLPLAYITASVHGL D+AERLA EL
Sbjct: 721 LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDIAERLATEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGAVDEEEEAVEGD 840
GDNVPS+PEGK PSLLMPP+P++C GDWPLLRVMKGIFEGGL++ RG +EE+ VEGD
Sbjct: 781 GDNVPSLPEGKTPSLLMPPTPIMCGGDWPLLRVMKGIFEGGLESADRGGTVDEED-VEGD 839
Query: 841 WGEELDMVDVDGLQNGDVAAILEDGEVAEEGEEEEGGWDLEDLELPPEAETPKAPVNARS 900
WGEELD ++VDG++N D+ IL E EE +EEGGW LEDL LPPE +TPKA NARS
Sbjct: 840 WGEELD-INVDGMENRDIEDILAAAEAGEEENDEEGGWGLEDLVLPPELDTPKASANARS 898
Query: 901 AVF 903
+VF
Sbjct: 899 SVF 901
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 1667 bits (4316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 800/903 (88%), Positives = 857/903 (94%), Gaps = 1/903 (0%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH KRPWILASLHSGVIQLWDYRMGTLIDRFDEH+GPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
SQPLFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHE PWIVSASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL+KK+ SPADD++R
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
SQMN+DLFGGVDA+VKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMNETKAWE
Sbjct: 181 FSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVS VMFHAKQDIIVSNSEDKSIRVWD TKRTG+QTFRREHDRFWILA HP
Sbjct: 241 VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
E+NLLAAGHD+GMIVFKLERERPAFA+SGDSLFYAKDRFLRYYE+STQKD+QVIPIRRPG
Sbjct: 301 EINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
+ SLNQSPRTLSYSPTENAVLICSD+DGGSYELY+IPKDS+GR D VQDAK+G GGSA+F
Sbjct: 361 TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF 420
Query: 421 IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
IARNRFAVL+KS++QVLVKNLKNEVVKKS LPI DAIFYAGTGNLLCR+ED+VVIFDLQ
Sbjct: 421 IARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRLVLG+LQTPFV+YVVWSNDMESVALLSKH IIIASKKLV QCTLHETIRVKSGAWDDN
Sbjct: 481 QRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAI I+ATEYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKL+LLRK+YDHVMSMI+NSQLCGQAMIAYLQQKGFPEVALHFV+DER RFNLALESGNI
Sbjct: 601 FKLALLRKKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
+AVASA EI+EKDHWYRLGVEALRQGN+ IVE+AYQ+TKNFERLSFLYLITGN+DKLSK
Sbjct: 661 SVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSK 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
++KIAEVKN+VMGQFHNALYLGDVKERVKILE+AGHLPLAYITASVHGL D+AERLA EL
Sbjct: 721 LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLTDIAERLAIEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGAVDEEEEAVEGD 840
GDNVPS+PEGK PSLLMPPSP++C GDWPLLRVMKGIFEGGL++ RGAVDEEEE VEGD
Sbjct: 781 GDNVPSLPEGKTPSLLMPPSPIMCGGDWPLLRVMKGIFEGGLESANRGAVDEEEEDVEGD 840
Query: 841 WGEELDMVDVDGLQNGDVAAILEDGEVAEEGEEEEGGWDLEDLELPPEAETPKAPVNARS 900
WGE LD DVDG++N D+ AIL+ E EE ++EEGGW L DL+LPPE +TPKA NARS
Sbjct: 841 WGEGLDKFDVDGMENTDIEAILDGAEAGEEEDDEEGGWGL-DLDLPPELDTPKASANARS 899
Query: 901 AVF 903
+ F
Sbjct: 900 STF 902
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 1628 bits (4217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 763/907 (84%), Positives = 842/907 (92%), Gaps = 3/907 (0%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH +RPWILASLHSGVIQ+WDYRMGTL+DRFDEHDGPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYKIKVWNYK HRCLFTL GHLDYIRTVQFHHEYPWIVSASDDQTIRIW
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTC++VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
Sbjct: 121 NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
L+QMNTDLFGGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMN+TKAWE
Sbjct: 181 LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR+WD TKRTG+QTFRREHDRFWIL++HP
Sbjct: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
EMNLLAAGHDSGMIVFKLERERPAF+VSGD++FY KDRFLR++EF+TQK+ Q+ PIRRPG
Sbjct: 301 EMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
S SLNQSP+TLSYSPTENAVLICSDVDGGSYELY++PKDS GR D +QDAKKG GGSA+F
Sbjct: 361 SVSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVF 420
Query: 421 IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
+ARNRFAVL+KSSNQVLVKNLKNE+VKKS LPIA DAI+YAGTGNLLC+AEDRV IFDLQ
Sbjct: 421 VARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRL+LG+LQ P VKYVVWS+DMESVALLSKHA++IA+KKLVH+CTLHETIRVKSGAWD+N
Sbjct: 481 QRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGII+TLDVPIYIT+V GN IFCLDRDGKN+ + +DA+EYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKL+LLRKRYDHVMSMI+NSQLCGQA+I+YLQQKGFPEVALHFVKDE+TRFNLALESGNI
Sbjct: 601 FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
QIAVASAKEID+KDHWYRLG+EALRQGN GIVEYAYQRTKNFERL+FLYLITG MDK+
Sbjct: 661 QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGF 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
M KIA N++MGQFHNALYLGD +RV+ILE+AG LPLAYITA+ HGL ++A+RLAAEL
Sbjct: 721 MCKIAGQNNNLMGQFHNALYLGDALKRVEILENAGQLPLAYITATTHGLTEIADRLAAEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGAVDEEEEAVEGD 840
G+N+PS+PEGKA SLL+PP+P+ SGDWPLLRVM GIFEGGLD G+ ++E++EA D
Sbjct: 781 GENIPSLPEGKARSLLIPPAPLTASGDWPLLRVMHGIFEGGLDATGKAELEEDDEAAGAD 840
Query: 841 WG-EELDMVDV-DGLQNGDVAAILEDGEVAEEGEEEEGGWDLEDLELPPEAETPKAPVNA 898
WG E+LDMVD + + NG E+GE EE + EEGGWDLEDLELPPEAETPK NA
Sbjct: 841 WGDEDLDMVDASEAMANGGDGFDAEEGEANEE-DGEEGGWDLEDLELPPEAETPKNAGNA 899
Query: 899 RSAVFGA 905
RSAVF A
Sbjct: 900 RSAVFVA 906
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 1621 bits (4198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/907 (83%), Positives = 839/907 (92%), Gaps = 3/907 (0%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH +RPWILASLHSGVIQ+WDYRMGTL+DRFDEHDGPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYKIKVWNYK HRCLFTL GHLDYIRTVQFHHEYPWIVSASDDQTIRIW
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTC++VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
Sbjct: 121 NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
L+QMNTDLFGGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMN+TKAWE
Sbjct: 181 LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWD TKRTG+QTFRREHDRFWILA+HP
Sbjct: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
EMNLLAAGHD+GMIVFKLERERPAF+VSGD++FY KDRFLR++E+STQK+ Q+ PIRRPG
Sbjct: 301 EMNLLAAGHDNGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEYSTQKEVQLAPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
S SLNQSPRTLSYSPTENAVLICSDVDGGSYELY++PKDS GR D +Q+AKKG GGSA+F
Sbjct: 361 SVSLNQSPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRTDYLQEAKKGAGGSAVF 420
Query: 421 IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
+ARNRFAVL+KSSNQVLVKNLKNE+VKKS LPIA DAI+YAGTGNLLC+AEDRV IFDLQ
Sbjct: 421 VARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIAMDAIYYAGTGNLLCKAEDRVTIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRL+LG+LQ P VKYVVWS+DMES+ALLSKHA++IA+KKLVH+CTLHETIRVKSGAWD+N
Sbjct: 481 QRLILGELQAPAVKYVVWSSDMESIALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGII+TLDVPIYIT+ GN IFCLDRDGKN+ I +DA+EYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNKLITVDASEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKL+LLRKRYDHVMSMI+NSQLCGQA+I+YLQQKGFPEVALHFVKDE+TRFNLALESGNI
Sbjct: 601 FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
QIAVASAKEID+KDHWYRLG+EALRQGN GIVEYAYQRTKNFERL+FLYLITG MDK+
Sbjct: 661 QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGF 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
M KIA N++MGQFHNALYLGD +RV+ILE+AG LPLAYITA+ HGL ++A+RLAAEL
Sbjct: 721 MCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITAATHGLTEIADRLAAEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGAVDEEEEAVEGD 840
G+N+PS+PEGK SLL+PP+P+ SGDWPLLRVM+GIFEGGLD G+ ++E++EA D
Sbjct: 781 GENIPSLPEGKTRSLLIPPAPLTASGDWPLLRVMRGIFEGGLDATGKAELEEDDEAAGAD 840
Query: 841 WG-EELDMVDV-DGLQNGDVAAILEDGEVAEEGEEEEGGWDLEDLELPPEAETPKAPVNA 898
WG E+LDMVD + + NG E+GE EE + EEGGWDLEDLELPPEAETPK NA
Sbjct: 841 WGDEDLDMVDASEAMANGGDGFDAEEGEANEE-DGEEGGWDLEDLELPPEAETPKNAGNA 899
Query: 899 RSAVFGA 905
S VF A
Sbjct: 900 LSVVFVA 906
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 1614 bits (4180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/907 (83%), Positives = 840/907 (92%), Gaps = 3/907 (0%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKSNRVKGLSFH +RPWILASLHSGVIQ+WDYRMGTL+DRFDEHDGPVRGVHFH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYKIKVWNYK HRCLFTL GHLDYIRTVQFHHE PWIVSASDDQTIRIW
Sbjct: 61 ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
NWQSRTC++VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI ALRKK+VSPADDILR
Sbjct: 121 NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISALRKKSVSPADDILR 180
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE 240
L+QMNTDLFGGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVK+WRMN+TKAWE
Sbjct: 181 LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE 240
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIR+WD TKRTG+QTFRREHDRFWIL++HP
Sbjct: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHP 300
Query: 301 EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIRRPG 360
EMNLLAAGHDSGMIVFKLERERPAF+VSGD++FY KDRFLR++EF+TQK+ Q+ PIRRPG
Sbjct: 301 EMNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPG 360
Query: 361 STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGGSAIF 420
S SLNQSP+TLSYSPTENAVLICSDVDGGSYELY++PKDS GR D +QDAKKG GGSA+F
Sbjct: 361 SVSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVF 420
Query: 421 IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ 480
+ARNRFAVL+KSSNQVLV+NLKNE+VKKS LPIA DAI+YAGTG+LLC+AEDRV IFDLQ
Sbjct: 421 VARNRFAVLEKSSNQVLVRNLKNEIVKKSPLPIATDAIYYAGTGSLLCKAEDRVTIFDLQ 480
Query: 481 QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN 540
QRL+LG+LQ P VKYVVWS+DMESVALLSKHA++IA+KKLVH+CTLHETIRVKSGAWD+N
Sbjct: 481 QRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDEN 540
Query: 541 GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI 600
GVFIYTTLNHIKYCLPNGDSGII+TLDVPIYIT+V GN IFCLDRDGKN+ + +DA+EYI
Sbjct: 541 GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYI 600
Query: 601 FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI 660
FKL+LLRKRYDHVMSMI+NSQLCGQA+I+YLQQKGFPEVALHFVKDE+TRFNLALESGNI
Sbjct: 601 FKLALLRKRYDHVMSMIKNSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI 660
Query: 661 QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSK 720
QIAVASAKEID+KDHWYRLG+EALRQGN GIVEYAYQRTKNFERL+FLYLITG MDK+
Sbjct: 661 QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGF 720
Query: 721 MLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAEL 780
M KIA N++MGQFHNALYLGD +RV+ILE+AG LPLAYITA+ HGL ++A+RLAAEL
Sbjct: 721 MCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITATTHGLTEIADRLAAEL 780
Query: 781 GDNVPSVPEGKAPSLLMPPSPVVCSGDWPLLRVMKGIFEGGLDNIGRGAVDEEEEAVEGD 840
G+N+PS+PEGKA SLL+PP+P+ SGDWPLLRVM+GIFEGGLD G+ ++E++EA D
Sbjct: 781 GENIPSLPEGKARSLLIPPAPLTASGDWPLLRVMRGIFEGGLDATGKAELEEDDEAAGAD 840
Query: 841 WGEE-LDMVDV-DGLQNGDVAAILEDGEVAEEGEEEEGGWDLEDLELPPEAETPKAPVNA 898
WG+E LD+VD + + NG E+GE EE + EEGGWDLEDLEL PEAETPK NA
Sbjct: 841 WGDEGLDIVDASEAMANGGDGFDAEEGEANEE-DGEEGGWDLEDLELLPEAETPKNAGNA 899
Query: 899 RSAVFGA 905
RSAVF A
Sbjct: 900 RSAVFVA 906
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 1162 bits (3006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/909 (62%), Positives = 704/909 (77%), Gaps = 31/909 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
S ++ P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 -----SGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + +L+KNLKNE+ KK +P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRM-HSLLIKNLKNEITKKIQVP-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY++A+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLSAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRGA-- 829
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL 831
Query: 830 ---VDEEEEAVEGDWGEELDM-VDVDGLQNGDVAAILEDGE-VAEEGEEEEGGWDL-EDL 883
+D + EG WGE+ ++ +D DG V A GE V +G+EE GGWD+ EDL
Sbjct: 832 AADIDIDTVGTEG-WGEDAELQLDEDGF----VEAPEGLGEDVLGKGQEEGGGWDVEEDL 886
Query: 884 ELPPEAETP 892
ELPPE + P
Sbjct: 887 ELPPELDVP 895
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 1162 bits (3006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/909 (62%), Positives = 705/909 (77%), Gaps = 31/909 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
S ++ P ++SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 -----SGSKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADTQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + +L+KNLKNE+ KK +P D IFYAGTGNLL R +
Sbjct: 414 SGLTAVWVARNRFAVLDRM-HSLLIKNLKNEITKKVQVP-NCDEIFYAGTGNLLLRDAES 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRGA-- 829
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL 831
Query: 830 ---VDEEEEAVEGDWGEELDM-VDVDGLQNGDVAAILEDGEVA-EEGEEEEGGWDL-EDL 883
+D + EG WGE+ ++ +D DG V A G+ A +G+EE GGWD+ EDL
Sbjct: 832 AADIDIDTVGTEG-WGEDAELQLDEDGF----VEATEGLGDDALGKGQEEGGGWDVEEDL 886
Query: 884 ELPPEAETP 892
ELPPE + P
Sbjct: 887 ELPPELDIP 895
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 1161 bits (3003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/921 (61%), Positives = 708/921 (76%), Gaps = 32/921 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFETKS RVKGLSFH KRPWIL SLH+GVIQLWDYRM TLID+FDEHDGPVRG+ FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
K QPLFVSGGDDYKIKVWNYK+ RCLFTLLGHLDYIRT FHHEYPWI+SASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPA---DD 177
NWQSRTC+ VLTGHNHYVMCA FHP EDLVVSASLDQTVRVWDI LRKK +SP D
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD 180
Query: 178 ILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
+ ++ DLFG DAVVK+VLEGHDRGVNWAAFHPT+PLIVSGADDRQVK+WRMNE+K
Sbjct: 181 VRGIT--GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESK 238
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNVSC +FH +Q++I+SNSEDKSIRVWD++KRTGVQTFRR+HDRFW+LA
Sbjct: 239 AWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA 298
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL AAGHD GMIVFKLERERPA+AV G+ L Y KDRFLR +F++ KD V+ +R
Sbjct: 299 AHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLR 358
Query: 358 RPGSTSLNQSPR-TLSYSPTENAVLIC---SDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
S ++ P +SY+P ENAVL+C S+++ +Y+LY IPKD+ + + K+
Sbjct: 359 -----SGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRS 413
Query: 414 LGGSAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDR 473
G +A+++ARNRFAVLD+ + +L+KNLKNE+ KK +P D IFYAGTGNLL R D
Sbjct: 414 SGLTAVWVARNRFAVLDRM-HSLLIKNLKNEITKKVQVP-NCDEIFYAGTGNLLLRDADS 471
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ L ++ VKYV+WS DM VALL+KHAI+I ++KL C +HE IRVK
Sbjct: 472 ITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVK 531
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SGAWD++GVFIYTT NHIKY + GD GIIRTLD+PIY+T+V GN ++CLDR+ + R +
Sbjct: 532 SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT 591
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TE+ FKL+L+ ++YD V+ M+RN++L GQ++IAYLQ+KG+PEVALHFVKDE+TRF+L
Sbjct: 592 IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL 651
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GNI+IA+ +AK +D+K+ W +LG AL QGN IVE YQRTKNF++LSFLYLITG
Sbjct: 652 ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG 711
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N++KL KM+KIAE++ D+ G + NALYLGDV ERV+IL++ G LAY+TA+ HGL + A
Sbjct: 712 NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA 771
Query: 774 ERLAAELGDNVPSVPE-GKAPSLLMPPSPVV-CSGDWPLLRVMKGIFEGGLDNIGRGA-- 829
E L ++P+ LL PP+P++ +WPLL V KG FEG + + G+G
Sbjct: 772 ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGAL 831
Query: 830 ---VDEEEEAVEGDWGEELDM-VDVDGLQNGDVAAILEDGEVA-EEGEEEEGGWDL-EDL 883
+D + EG WGE+ ++ +D DG V A G+ A +G+EE GGWD+ EDL
Sbjct: 832 AADIDIDTVGTEG-WGEDAELQLDEDGF----VEATEGLGDDALGKGQEEGGGWDVEEDL 886
Query: 884 ELPPEAE-TPKAPVNARSAVF 903
ELPPE + +P A A F
Sbjct: 887 ELPPELDISPGAAGGAEDGFF 907
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/861 (56%), Positives = 630/861 (73%), Gaps = 37/861 (4%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
ML KFETK++RVKGLSFH RPWILASLHSG I L+DYR+ TL+++FDEH+GPVRG++FH
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYKIKVWNYK RCLFTL GH DYIR+V+FH E PWIVS+SDD IRIW
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKK--TVSP--AD 176
NWQSRTCI+ L GHNHYVM A FHPK+DLVVSASLDQT+R+WDI L+KK TV P +
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYREN 180
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
D +RL D G D V+ LEGHDRGVNWA+FHPT P IVS +DD QVKLWRMN+
Sbjct: 181 DPMRLQ----DELFGTDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDP 236
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
VDT RGH NNVSC +FH +QD+I+SNSEDK+IRVWD+ K++ V RR+HDRFW L
Sbjct: 237 I---VDTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTL 293
Query: 297 ASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDS-LFYAKDRFLRYYEFSTQKDTQVIP 355
ASHP NL AAGHDSGMIVFKLERERP F +GDS +F+ K + ++F + +
Sbjct: 294 ASHPNQNLFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQAGRTVSLFH 353
Query: 356 IRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVI-PKDSIGRGDSVQDAKKGL 414
I + S N +T+SY+ TE A+L+ SD +GGSY LY I PKDS + + KKG
Sbjct: 354 ISKLPS---NNGTQTMSYNQTERAILVSSDAEGGSYHLYKIPPKDS-----NTVNTKKGT 405
Query: 415 GGSAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGT-GNLLCRAEDR 473
G +AIF+ R+RFAVLDK +N V++++L+NE +K+ +P D I+ +G+ G +L ++ED+
Sbjct: 406 GVAAIFVGRDRFAVLDKGNN-VVIRDLENEEIKRCQIPFTIDWIYPSGSPGTILIQSEDK 464
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
+ +FD+QQ+ +L ++Q V+YV+WS D VA L++ I++A+KKL C +HET+ K
Sbjct: 465 IHMFDIQQKKMLCEIQVHGVRYVIWSKDRNYVAFLTRDFIVLANKKLEQICMIHETVLPK 524
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
SG WDDNGVFIY+T NH+KY L NGD+G IRTL+ IYIT V N +F +DR+ KNR I
Sbjct: 525 SGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNRIIE 584
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TEY+ KLSLL++ Y+ VM+++R ++L G+A+IAYLQ+KG+P+V +HFVKD+RTRFNL
Sbjct: 585 IDTTEYVLKLSLLQQNYNQVMTILRENRLVGKAIIAYLQKKGYPDV-VHFVKDDRTRFNL 643
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
AL++GNI IA++SAK +D+KD W RLGVEAL+QGN +VE AY RT F+RLSFLYL+ G
Sbjct: 644 ALDAGNIDIALSSAKILDDKDCWNRLGVEALKQGNYQVVEMAYSRTSEFDRLSFLYLLVG 703
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N+ L KM I+ +D+M +FH +LYLGDV+ER+KIL+ AG LAYITAS+HGL + A
Sbjct: 704 NLSTLKKM--ISYESSDIMSRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLTEKA 761
Query: 774 ER----LAAELGDNVPSVPEGKAPSLLMPPSPVVCSG---DWPLLRVMKGIFEGGLDNIG 826
E + ++ +P +P K LL+PPSP+ C+ +WPLL K + + +N
Sbjct: 762 ESIGNLITSDGKSQLPQLP--KQSYLLVPPSPINCNPNELNWPLLTTTKSVSDVMGEN-- 817
Query: 827 RGAVDEEEEAVEGDWGEELDM 847
R V++ GDW + D+
Sbjct: 818 RFGVEQSTSTPTGDWESDEDI 838
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/921 (51%), Positives = 615/921 (66%), Gaps = 36/921 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFE++S+R KG++FH +PWIL SLH+G IQLWDYRMGTL+DRFD HDGPVRG+ FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QPLFVSGGDDYK+ VWNYK + LF+L GH+DY+R FHHEYPWI+S SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL- 179
NWQSR CI++LTGH+HYVMCA+FHP EDL+VSASLDQTVRVWDI LR K +P L
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLE 182
Query: 180 -RLSQ----MNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
+L+Q ++ DLFG DA+VK+VLEGHDRGVNW AFHPTLPLI+S DDR VKLWRM
Sbjct: 183 DQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMT 242
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
+KAWEVDT RGH NNVSC +FH Q++I+S SEDK+IRVWD+ +RT VQTFRR++DRFW
Sbjct: 243 ASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFW 302
Query: 295 ILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYA-KDRFLRYYEFSTQKDTQV 353
+ HP++NL AA HDSG++VFKLERERPA A++ ++L Y K++ + Y+ + T V
Sbjct: 303 FITVHPKLNLFAAAHDSGVMVFKLERERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTV 362
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
++ GS L PR+LSY+P E L+ S D G YEL + S ++D KG
Sbjct: 363 ASVKHLGSAWL--PPRSLSYNPAEKVALLTSSADNGVYELVNVSSRS--NSLPLKDNIKG 418
Query: 414 LGGSAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDR 473
G AIF+ARNRFAV +S + +K+L N+V K LP IF+AG G++L +
Sbjct: 419 PGDDAIFVARNRFAVFSRSDQTIEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQ 478
Query: 474 VVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVK 533
V +FDLQQ+ ++ VKYVVWSND ALL KH + I K L ++HETIR+K
Sbjct: 479 VHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIK 538
Query: 534 SGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIV 593
S W +N V +Y TL+H+KY L +GD+G+I+TL+ +Y+ K GN +F L+R + +
Sbjct: 539 SAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFE 598
Query: 594 IDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNL 653
ID TEY+FKL+LLRK Y+ V+ +I+NS L GQA+IAYLQ+KG+PE+AL FV+D TRF L
Sbjct: 599 IDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPSTRFEL 658
Query: 654 ALESGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITG 713
ALE GN++ A+ A+ ID + W RL +A+ GN I E +Q+ + FE+LSFLYLITG
Sbjct: 659 ALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITG 718
Query: 714 NMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
N +KL KM IAE +ND + F N+LYL +V+ R+ ILE AG P+AY+TA +GL++ A
Sbjct: 719 NAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKA 778
Query: 774 ERLAAELGDNVPSVPEGKAPSLLMPPSPV--VCSGDWPLLRVMKGIFEGGLDN------I 825
+++ + + S P PV + +WPLL FE L I
Sbjct: 779 QQILSHCNKTEEEIKLPSLGSAFTTPVPVNETYTHNWPLLDTSHSTFEKSLQERMEQLAI 838
Query: 826 GRGAVDEEEEAVEGDWGEELDMVDVDGLQNGDVAAILEDGEVAEEGEEEE-GGWDLEDLE 884
R E EE E +D+VD E ++AE EEE GW++ED
Sbjct: 839 ERQEEQESEEEYEEVEQSLMDVVD-------------EMSDLAESVPEEEVDGWEVED-- 883
Query: 885 LPPEAETPKAPVNARSAVFGA 905
L PE E V+ SA GA
Sbjct: 884 LAPE-EAVNDVVDDASAFVGA 903
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/905 (47%), Positives = 586/905 (64%), Gaps = 34/905 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
MLTKFE+KS R KG++FH RPW+L +L S IQLWDYRMGTL+ RF++H+GPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
+QP+FVS GDDY IKVW+ ++CL+TL GHLDY+RTV FH E PWI+SASDDQTIRIW
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIW 122
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL- 179
NWQ+R I+ LTGHNH+VMCA FHP +DL+VSASLD+T+R+WDI LRK+ +P
Sbjct: 123 NWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFE 182
Query: 180 -RLSQMNTDLFGGV-DAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK 237
++S L G + D VVK++LEGH RGVNWA+FHPTLPLIVSG+DDRQVKLWRM+ TK
Sbjct: 183 EQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATK 242
Query: 238 AWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILA 297
AWEVDT RGH NNV V+FH Q++I+S EDK++RVWD+ KRT V+ F+RE+DRFW++A
Sbjct: 243 AWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIA 302
Query: 298 SHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQKDTQVIPIR 357
+HP +NL A HDSG++VFKL+RERP + + LF+ + F+ QK +P
Sbjct: 303 AHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFFVNAE-KQIQSFNFQKRVASLPYA 361
Query: 358 R-PGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKGLGG 416
G + R++SY+P++++VL+ + G + L ++PK +G + + G
Sbjct: 362 SLKGIGQPWDAFRSISYNPSQHSVLV--NEANGKFALVILPKQPVGAVEPTS-VTQDTGN 418
Query: 417 SAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVI 476
A F+ RNRF V +K++ V V++L+N+V + + I AG G++L V++
Sbjct: 419 FATFVGRNRFVVYNKNTESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVIL 478
Query: 477 FDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGA 536
+D+QQ + L VKYV WS D + VAL+SKH I +A+KKL ++HETIR+KS A
Sbjct: 479 YDVQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAA 538
Query: 537 WDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDA 596
WD+ GV IY+TLNHI+Y L NGD GII+TL+ +YITKV G ++CL+R+G+ + ID
Sbjct: 539 WDETGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDP 598
Query: 597 TEYIFKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALE 656
TEY FK +L+ K + V+ +I++S L GQ +I+YLQ+ G+PE+AL FV+D RF+LALE
Sbjct: 599 TEYRFKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRFDLALE 658
Query: 657 SGNIQIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMD 716
GN+ +A+ AK++++ W RL EAL QGNA + E YQ +F++LSFLYL+TG+++
Sbjct: 659 YGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVN 718
Query: 717 KLSKMLKIAEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERL 776
KLSKM IA+ + D N Y KER I G LPLAY A +G + A
Sbjct: 719 KLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEAAASAF 778
Query: 777 --AAELGDNVPSVPEGKAPSLLMPPSPVVCSG--DWPLLRVMKGIFEGG-LDNIGRGAVD 831
AE+ + ++P+ S + PV+ WPL FE L I +D
Sbjct: 779 LEQAEVDEQDVTLPDQMDASNFV-QRPVISKPLEKWPLKEAELSYFEKAVLGQIDDLTID 837
Query: 832 EEEEAVEGDWGEELDMVDVDGLQNGDVAAILEDGEVAEEGEEEEGGWDL--EDL----EL 885
+E AV +E + G +N + I ED EG WDL EDL EL
Sbjct: 838 DETPAVNTTQEQEEPL----GEENFNDEDIGED----------EGAWDLGDEDLDVGEEL 883
Query: 886 PPEAE 890
P E E
Sbjct: 884 PEEVE 888
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 232/839 (27%), Positives = 396/839 (47%), Gaps = 101/839 (12%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ +C V GH HYVM +PK+ + SASLD+T++VW +G + SP
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 178 ---------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH NVSC FH + II++ SED ++R+W + T +R W +AS
Sbjct: 222 -VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASL 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRYYEFSTQKDTQV----- 353
N +A G+D G I+ KL RE PA ++ + + +AK ++ D ++
Sbjct: 281 RGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ S P+T+ ++P V++C D G Y +Y ++ K
Sbjct: 341 LPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKS 387
Query: 414 LGGSAIFI---ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLCR 469
G + F + +A+ + +S +VK KN KKS P A++I+ G L R
Sbjct: 388 FGSAQEFAWAHDSSEYAIRESNS---IVKIFKNFKEKKSFKPDFGAESIY--GGFLLGVR 442
Query: 470 AEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII---ASKKLVHQCTL 526
+ + + +D ++ ++ K++ WS+ E V + ++ + I S+K++
Sbjct: 443 SVNGLAFYDWDNTELIRRIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQET 501
Query: 527 HETIR-----------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDV 568
HE + VK+G W + FIYT ++N + Y + G+ I LD
Sbjct: 502 HEGVTEDGIEDAFEVLGEIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDR 559
Query: 569 PIYITKV--SGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQ 621
+Y+ N ++ D++ + ++++ EY + +++R+ + D V+ I Q
Sbjct: 560 TMYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ 617
Query: 622 LCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGV 681
A +L+++GF + AL D RF LAL+ G ++IA A E + + W +L
Sbjct: 618 RTRVAH--FLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAE 675
Query: 682 EALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNAL 739
A+ + G+ + +++ L L +GN + ++K+ + AE KN+V F +
Sbjct: 676 LAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVA--FMSYF 733
Query: 740 YLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
G V +++L G LP A A + L R+ +N+ V + A SL P
Sbjct: 734 LQGKVDACLELLIRTGRLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 233/837 (27%), Positives = 394/837 (47%), Gaps = 97/837 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ +C V GH HYVM +PK+ + SASLD+T++VW +G + SP
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 178 ---------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH NVSC FH + II++ SED ++R+W + T +R W +AS
Sbjct: 222 -VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASL 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRYYEFSTQKDTQV----- 353
N +A G+D G I+ KL RE PA ++ + + +AK ++ D ++
Sbjct: 281 RGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ S P+T+ ++P V++C D G Y +Y ++ K
Sbjct: 341 LPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKS 387
Query: 414 LGGSAIFI-ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLCRAE 471
G + F A + + SN V VK KN KKS P A++I+ G L R+
Sbjct: 388 FGSAQEFAWAHDSSEYAIRESNSV-VKIFKNFKEKKSFKPDFGAESIY--GGFLLGVRSV 444
Query: 472 DRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII---ASKKLVHQCTLHE 528
+ + +D + ++ ++ K++ WS+ E V + ++ + I S+K++ HE
Sbjct: 445 NGLAFYDWENTELIRRIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHE 503
Query: 529 TIR-----------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDVPI 570
+ VK+G W + FIYT ++N + Y + G+ I LD +
Sbjct: 504 GVTEDGIEDGFEVLGEIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTM 561
Query: 571 YITKV--SGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLC 623
Y+ N ++ D++ + ++++ EY + +++R+ + D V+ I Q
Sbjct: 562 YLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQRT 619
Query: 624 GQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEA 683
A +L+++GF + AL D RF LAL+ G ++IA A E + + W +L A
Sbjct: 620 RVAH--FLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELA 677
Query: 684 LRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYL 741
+ + G+ + +++ L L +GN ++K+ + AE KN+V F +
Sbjct: 678 ISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQ 735
Query: 742 GDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
G + +++L G LP A A + L R+ +N+ V + A SL P
Sbjct: 736 GKLDACLELLIRTGRLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 293 bits (749), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 232/839 (27%), Positives = 396/839 (47%), Gaps = 101/839 (12%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ +C V GH HYVM +PK+ + SASLD+T++VW +G + SP
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 178 ---------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH NVSC FH + II++ SED ++R+W + T +R W +AS
Sbjct: 222 -VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASL 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRYYEFSTQKDTQV----- 353
N +A G+D G I+ KL RE PA ++ + + +AK ++ D ++
Sbjct: 281 RGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ S P+T+ ++P V++C D G Y +Y ++ K
Sbjct: 341 LPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKS 387
Query: 414 LGGSAIFI---ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLCR 469
G + F + +A+ + +S +VK KN KKS P A++I+ G L R
Sbjct: 388 FGSAQEFAWAHDSSEYAIRESNS---IVKIFKNFKEKKSFKPDFGAESIY--GGFLLGVR 442
Query: 470 AEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII---ASKKLVHQCTL 526
+ + + +D ++ ++ K++ WS+ E V + ++ + I S+K++
Sbjct: 443 SVNGLAFYDWDNTELIRRIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAVQET 501
Query: 527 HETIR-----------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDV 568
HE + VK+G W + FIYT ++N + Y + G+ I LD
Sbjct: 502 HEGVTEDGIEDAFEVLGEIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDR 559
Query: 569 PIYITKV--SGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQ 621
+Y+ N ++ D++ + ++++ EY + +++R+ + D V+ I Q
Sbjct: 560 TMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ 617
Query: 622 LCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGV 681
A +L+++GF + AL D RF LAL+ G ++IA A E + + W +L
Sbjct: 618 RTRVAH--FLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAE 675
Query: 682 EALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNAL 739
A+ + G+ + +++ L L +GN + ++K+ + AE KN+V F +
Sbjct: 676 LAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVA--FMSYF 733
Query: 740 YLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
G V +++L G LP A A + L R+ +N+ V + A SL P
Sbjct: 734 LQGKVDACLELLIRTGRLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 231/839 (27%), Positives = 396/839 (47%), Gaps = 101/839 (12%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ +C V GH HYVM +PK+ + SASLD+T++VW +G + SP
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 178 ---------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH NVSC FH + II++ SED ++R+W + T +R W +AS
Sbjct: 222 -VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASL 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRYYEFSTQKDTQV----- 353
N +A G+D G I+ KL RE PA ++ + + +AK ++ DT++
Sbjct: 281 RGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ S P+T+ ++P V++C D G Y +Y ++ K
Sbjct: 341 LPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKS 387
Query: 414 LGGSAIFI---ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLCR 469
G + F + +A+ + +S +VK KN KKS P A++I+ G L R
Sbjct: 388 FGSAQEFAWAHDSSEYAIRESNS---IVKIFKNFKEKKSFKPDFGAESIY--GGFLLGVR 442
Query: 470 AEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII---ASKKLVHQCTL 526
+ + + +D + ++ ++ K++ WS+ E V + ++ + I S+K++
Sbjct: 443 SVNGLAFYDWENTELIRRIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQET 501
Query: 527 HETIR-----------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDV 568
HE + VK+G W + FIYT ++N + Y + G+ I LD
Sbjct: 502 HEGVTEDGIEDAFEVLGEIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDR 559
Query: 569 PIYITKV--SGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQ 621
+Y+ N ++ D++ + ++++ EY + +++R+ + D V+ I Q
Sbjct: 560 TMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQ 617
Query: 622 LCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGV 681
A +L+++GF + AL D RF LAL+ G ++IA A E + + W +L
Sbjct: 618 RTRVAH--FLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAE 675
Query: 682 EALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNAL 739
A+ + + + +++ L L +GN ++K+ + AE KN+V F +
Sbjct: 676 LAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYF 733
Query: 740 YLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
G + +++L G LP A A + L R+ +N+ V + A SL P
Sbjct: 734 LQGKLDACLELLIRTGRLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 235/837 (28%), Positives = 392/837 (46%), Gaps = 97/837 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ +C V GH HYVM +PK+ + SASLD+T++VW +G + SP
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 178 ---------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH NVSC FH + II++ SED ++R+W + T +R W +AS
Sbjct: 222 -VQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASL 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRYYEFSTQ-----KDTQV 353
N +A G D G I+ KL RE PA ++ + + +AK ++ KD +
Sbjct: 281 RGSNNVALGCDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGNAEIKDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ S P+T+ ++P V++C D G Y +Y ++ K
Sbjct: 341 LPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKS 387
Query: 414 LGGSAIFI-ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLCRAE 471
G + F A + + SN V VK KN KKS P A++I+ G L R+
Sbjct: 388 FGSAQEFAWAHDSSEYAIRESNSV-VKIFKNFKEKKSFKPDFGAESIY--GGFLLGVRSV 444
Query: 472 DRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII---ASKKLVHQCTLHE 528
+ + +D ++ ++ K++ WS E V + ++ + I S+K++ HE
Sbjct: 445 NGLAFYDWDNTELIRRIEIQ-PKHIFWSGSGELVCIATEESFFILKYLSEKVLAAQETHE 503
Query: 529 TIR-----------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDVPI 570
+ VK+G W + FIYT ++N + Y + G+ I LD +
Sbjct: 504 GVTEDGIEDAFEVLGEIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTM 561
Query: 571 YITKV--SGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLC 623
Y+ N ++ D++ + ++++ EY + +++R+ + D V+ I Q
Sbjct: 562 YLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQRT 619
Query: 624 GQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEA 683
A +L+++GF + AL D RF LAL+ G ++IA A E + + W +L A
Sbjct: 620 RVAH--FLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELA 677
Query: 684 LRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYL 741
+ + G+ + +++ L L +GN + ++K+ + AE KN+V F +
Sbjct: 678 ISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVA--FMSYFLQ 735
Query: 742 GDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
G V +++L G LP A A + L R+ +N+ V + A SL P
Sbjct: 736 GKVDACLELLIRTGRLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 232/837 (27%), Positives = 392/837 (46%), Gaps = 97/837 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K S+RVK + H PW+LASL++G + +W++ TL+ F+ D PVR F +
Sbjct: 10 KLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD +I+V+NY + H DYIR + H P+I+++SDD I++W+W
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWD 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ +C V GH HYVM +PK+ + SASLD+T++VW +G + SP
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLG-----SSSP------- 177
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 178 ---------------NFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V T GH NVSC FH + II++ SED ++R+W + T +R W +AS
Sbjct: 222 -VQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASL 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRYYEFSTQKDTQV----- 353
N +A G+D G I+ KL RE PA ++ + + +AK ++ DT++
Sbjct: 281 RGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ S P+T+ ++P V++C D G Y +Y ++ K
Sbjct: 341 LPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD---GEYIIYT----------AMALRNKS 387
Query: 414 LGGSAIFI-ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLCRAE 471
G + F A + + SN V VK KN KKS P A++I+ G L R+
Sbjct: 388 FGSAQEFAWAHDSSEYAIRESNSV-VKIFKNFKEKKSFKPDFGAESIY--GGFLLGVRSV 444
Query: 472 DRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII---ASKKLVHQCTLHE 528
+ + +D + ++ ++ K++ WS+ E V + ++ + I S+K++ HE
Sbjct: 445 NGLAFYDWENTELIRRIEIQ-PKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHE 503
Query: 529 TIR-----------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTLDVPI 570
+ VK+G W + FIYT ++N + Y + G+ I LD +
Sbjct: 504 GVTEDGIEDAFEVLGEIQEIVKTGLWVGD-CFIYTSSVNRLNYYV-GGEIVTIAHLDRTM 561
Query: 571 YITKV--SGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLC 623
Y+ N ++ D++ + ++++ EY + +++R+ + D V+ I Q
Sbjct: 562 YLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEY--QTAVMRRDFSMADKVLPTIPKEQRT 619
Query: 624 GQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEA 683
A +L+++GF + AL D RF LAL+ G ++IA A E + + W +L A
Sbjct: 620 RVAH--FLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELA 677
Query: 684 LRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYL 741
+ + + + +++ L L +GN ++K+ + AE KN+V F +
Sbjct: 678 ISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVA--FMSYFLQ 735
Query: 742 GDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
G + +++L G LP A A + L R+ +N+ V + A SL P
Sbjct: 736 GKLDACLELLIRTGRLPEAAFLARTY-LPSQVSRVVKLWRENLSKVNQKAAESLADP 791
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 273 bits (697), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 214/812 (26%), Positives = 373/812 (45%), Gaps = 91/812 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S+RVK + H W+LA+L++G + +W+Y TL+ F+ D PVR F +
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DY+R++ H P+++S+SDD +++W+W
Sbjct: 70 SWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWD 129
Query: 124 SRTCI-SVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
++ + GH HYVM + +PK++ +ASLD+TV+VW G+
Sbjct: 130 NKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGS--------------- 174
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFH--PTLPLIVSGADDRQVKLWRMNETKAW 239
V + LEGH++GVN ++ P I+SGADD VK+W
Sbjct: 175 ------------NVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH NVS V FH + +I++ SED ++R+W T +R W + +
Sbjct: 222 -VQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQ 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFST--------QKD 350
N +A G+D G + KL RE PA ++ S + +AK ++ T +D
Sbjct: 281 KGANTIAIGYDEGSVTLKLGREEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQD 340
Query: 351 TQVIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDA 410
+ +P+ S P+TL++S V+ C D G Y +Y ++++
Sbjct: 341 GERLPLSVKDLGSSEIYPQTLAHSSNGRFVVACGD---GEYIVYT--------AMALRNK 389
Query: 411 KKGLGGSAIF-IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGN--LL 467
G G ++ + N FAV + ++N + KN K+ KS I +D + +G L
Sbjct: 390 DFGQGLEFVWAVDPNMFAVRESATNVKIKKNFKDH---KS---IRSDMVLEGISGGPLLA 443
Query: 468 CRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVAL--------LSKHAIIIASKK 519
R+ + + FD + +++ ++ K + WS++ E VA+ L A +A+
Sbjct: 444 LRSNNSLCFFDWESAVLVRRIEIT-SKSIYWSDNGEMVAICGDDSFYVLKYSAEAVANAT 502
Query: 520 LVHQCTLHETIR--------VKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIY 571
V + + + VK+G W + T LN I Y + G+ I +D P+Y
Sbjct: 503 EVTEDGIEDAFEVIGEQAEAVKTGFWIGDCFIFTTALNRINYYV-GGEIVTIAHVDRPLY 561
Query: 572 IT--KVSGNTIFCLDRDGK--NRAIVIDATEYIFKLSLLRKRY---DHVMSMIRNSQLCG 624
+ + ++ +D+D + +++ EY + +++R+ + D V++ I Q
Sbjct: 562 LLGYMAKESRVYAVDKDLNVISYKLLLSVLEY--QTAVMRRDFDTADKVLTTIPKEQRTR 619
Query: 625 QAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEAL 684
A +L+++GF + AL +D +F+L++ G+++ A A + D ++ W L A
Sbjct: 620 VAH--FLEKQGFKKQALAVSQDPDHKFDLSVALGDLKTAYDLALQSDSEEKWKALSNAAT 677
Query: 685 RQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDV 744
+ + R ++F L L G+ L K+ + F ++L LGD+
Sbjct: 678 LKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDI 737
Query: 745 KERVKILESAGHLPLAYITASVHGLQDVAERL 776
+ L S G LP A A H V+ L
Sbjct: 738 DACLDKLISTGRLPEAAFLARTHAPSRVSSIL 769
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 220/843 (26%), Positives = 390/843 (46%), Gaps = 88/843 (10%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
KF +S RVK + H PWILASL+SG + +W+Y+ T+ F+ + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ C + GH+HYVM F+PK+ + SASLD+T+++W++G SP +
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ L+ H +GVN + P +++G+DD K+W +TK+
Sbjct: 179 ----------------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH +NVS V FH + II++ SED ++R+W T T +R W +
Sbjct: 222 -VQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYI 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFST------QKDTQ 352
+ G+D G I+ KL RE P ++ S + +AK ++ + D +
Sbjct: 281 KSSRRVVIGYDEGTIMVKLGREIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEATDGE 340
Query: 353 VIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKK 412
+P+ + + P++L ++P V++C D G Y +Y + ++
Sbjct: 341 RLPLSVKELGTCDLYPQSLKHNPNGRFVVVCGD---GEYIIYT--------ALAWRNRSF 389
Query: 413 GLGGSAIFIARNRFAVLDKSSN-QVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAE 471
G G ++ + AV + SS ++ KN + +KSI P + + GT +C +
Sbjct: 390 GSGLEFVWSSEGECAVRESSSKIKIFSKNFQE---RKSIRPTFSAEKIFGGTLLAMC-SN 445
Query: 472 DRVVIFDLQQRLVLGDLQTPFVKYVVW--SNDMESVALLSKHAIIIASKKLVHQC----- 524
D + +D + ++ + VK + W S D+ ++A + I+ +++LV
Sbjct: 446 DFICFYDWAECRLIQQIDVT-VKNLYWAESGDLVAIASDTSFYILKYNRELVSSHFDSGR 504
Query: 525 ------------TLHET-IRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLDVPI 570
LHE RV++G W + FIY + + YC+ G+ + LD P+
Sbjct: 505 PTDEEGVEDAFEVLHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPM 562
Query: 571 YITKVSGNT--IFCLDRDGKNRAIVIDATEYIFKLSLLR---KRYDHVMSMIRNSQLCGQ 625
Y+ N ++ +D++ + + +K ++R R + ++ I Q
Sbjct: 563 YLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDRANQILPTIPKEQHNNV 622
Query: 626 AMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 685
A +L+ +G E AL D +F+LA++ G ++IA A+E+ + W +LG A+
Sbjct: 623 AH--FLESRGMIEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMS 680
Query: 686 QGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVK 745
G + E + + L LY G+ + +SK+ +A+ + F LG ++
Sbjct: 681 SGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGRLE 740
Query: 746 ERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMPPSPVVCS 805
+ +++L + +P A + A + V+E + A +++ V A SL P
Sbjct: 741 DCLQLLVESNRIPEAALMARSYLPSKVSE-IVALWREDLSKVNPKAAESLADPEEYSNLF 799
Query: 806 GDW 808
DW
Sbjct: 800 EDW 802
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 265 bits (678), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 212/841 (25%), Positives = 371/841 (44%), Gaps = 103/841 (12%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
+ ++S+RVK + H PW+L +L++G + + +Y ++ F+ D PVR F +
Sbjct: 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
++G DD +I+V+NY + + H DY+R + H P ++++SDD I++WNW+
Sbjct: 70 NWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
C V GH HYVM F+PK++ SASLD+TV+VW +G+
Sbjct: 130 KMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGS--------------- 174
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFH--PTLPLIVSGADDRQVKLWRMNETKAW 239
+ LEGH++GVN ++ P ++SGADDR VK+W
Sbjct: 175 ------------NFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC- 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH N+S V FH + I+++ SED ++R+W +R W ++S
Sbjct: 222 -VQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSM 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFA--VSGDSLFYAKDRFLRYYEFST------QKDT 351
N +A G+D G I+ K+ RE PA + V G + +AK ++ T KD
Sbjct: 281 RGTNNVALGYDEGSIIIKVGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGTEIKDG 340
Query: 352 QVIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAK 411
+ +P+ + P+T++++P V++C D G Y +Y S+
Sbjct: 341 ERLPVATKDMGACEIYPQTIAHNPNGRFVVVCGD---GEYIIYT----------SMALRN 387
Query: 412 KGLGGSAIFI---ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLL 467
K G + F+ N +A+ + + L +N K +KS P A++I+ G
Sbjct: 388 KAFGSAQEFVWALESNEYAIRENNGTVRLFRNFKE---RKSFTPEYGAESIY--GGYYFG 442
Query: 468 CRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIASKKLVHQCTLH 527
+ + +D + ++ ++ K V W+ V L + + +
Sbjct: 443 VKTSSGLAFYDWETLQLVRRIEVQ-PKNVFWNESGSLVCLATDDSYFVLGVDTAQVANAV 501
Query: 528 ETIR--------------------VKSGAWDDNGVFIYT-TLNHIKYCLPNGDSGIIRTL 566
ET VK+G W + FIYT ++N I Y + G+ + L
Sbjct: 502 ETKEGLEDDGVESAFNVLGEVSECVKTGLWVGD-CFIYTNSVNRINYYV-GGEIVTVSHL 559
Query: 567 DVPIYITKV--SGNTIFCLDRDGKNRAIVIDATEYIFKLSLLRK---RYDHVMSMIRNSQ 621
D +Y+ N I+ D++ + + + ++ +++R+ R D V+ I
Sbjct: 560 DRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEH 619
Query: 622 LCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGV 681
A +L+++GF AL D +F+LAL+ G+++IA+ A+E + W +L
Sbjct: 620 RTRVAH--FLEKQGFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLAD 677
Query: 682 EALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQ----FHN 737
A + N +V+ Q+ + L L +G+ +++L++ G F +
Sbjct: 678 VASSKNNMSLVKECMQKANDLSGLLLLSTASGD----AQLLEVVGAAGSAQGHHNLAFLS 733
Query: 738 ALYLGDVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLM 797
A DV+ ++IL LP A A + L R+ + + V E SL
Sbjct: 734 AFLRSDVERCLEILIETNRLPEAAFFARTY-LPSQMSRIVELWREKLGKVNEKAGQSLAD 792
Query: 798 P 798
P
Sbjct: 793 P 793
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 46/217 (21%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
M+ FE V+ F +++ WIL I++++Y + F+ H +R + H
Sbjct: 49 MVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVH 108
Query: 61 KSQPLFVSGGDDYKIKVWNY-KMHRCL--------------------------------- 86
+QPL ++ DD IK+WN+ KM C
Sbjct: 109 PTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVK 168
Query: 87 ----------FTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
FTL GH + V ++H + P+++S +DD+ ++IW++Q++TC+ L GH
Sbjct: 169 VWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT 171
+ FHP+ +V++ S D TVR+W G R +T
Sbjct: 229 AQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLET 265
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 222/837 (26%), Positives = 385/837 (45%), Gaps = 93/837 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
KF +S RVK + H PWIL+SL+SG + +WDY+ T++ F+ + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW- 122
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWD 129
Query: 123 QSRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ C + GH+HYVM +F+PK+ + SASLD+T ++W +G SP +
Sbjct: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLG-------SPDPN---- 178
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ L+GH +GVN + P +++G+DD K+W +TK+
Sbjct: 179 ----------------FTLDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDY-QTKSC 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH +N+S V FH + II++ SED ++R+W T T +R W +
Sbjct: 222 -VQTLEGHTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYM 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFST------QKDTQ 352
+ G+D G I+ K+ RE P ++ + + +AK ++ T D +
Sbjct: 281 KGSRRMVIGYDEGTIMIKMGREVPVASMDTSGKIIWAKHNEIQTVNIKTVGAGFEVTDGE 340
Query: 353 VIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYV-IPKDSIGRGDSVQDAK 411
+P+ S + P++L ++P V++C D G + +Y + + G +++
Sbjct: 341 RLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGD---GEFIIYTALAWRNRSFGSALEFVW 397
Query: 412 KGLGGSAIFIARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAE 471
G AI + +R + KS + KK+I P + + G +C +
Sbjct: 398 SSEGEYAIRESTSRIKIFSKSFQE-----------KKTIRPTFSAERIFGGILLAMC-SS 445
Query: 472 DRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII------------ASKK 519
D + +D ++ + VK + W++ + VA+ S + I S K
Sbjct: 446 DFICFYDWADCRLIRRIDVN-VKNLYWADSGDLVAIASDTSFYILKYNRDVVASYLESGK 504
Query: 520 LVHQ-------CTLHE-TIRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLDVPI 570
V + LHE RV++G W + FIY + + YC+ G+ + LD P+
Sbjct: 505 PVDEEGVEDAFELLHEVNERVRTGIWVGD-CFIYNNSSWRLNYCV-GGEVTTMYHLDRPM 562
Query: 571 YITKVSGNT--IFCLDRDGKNRAIVIDATEYIFKLSLLR---KRYDHVMSMIRNSQLCGQ 625
Y+ N ++ +D++ + + +K ++R +R + ++ I +Q
Sbjct: 563 YLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDIERANDILPSIPKAQYNNV 622
Query: 626 AMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 685
A +L+ +G E AL D RF+LA++ G +++A A A E + W +LG A+
Sbjct: 623 AH--FLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMS 680
Query: 686 QGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEV--KNDVMGQFHNALYLGD 743
G + E + K+ L LY G+ + + K+ A+ KN+V F LG
Sbjct: 681 TGKLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQAKEHGKNNV--AFLCLFMLGK 738
Query: 744 VKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMPPS 800
+++ +++L + +P A + A + V+E +A D P KA L PS
Sbjct: 739 LEDCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSKVNP--KAAESLADPS 793
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 225/868 (25%), Positives = 395/868 (45%), Gaps = 101/868 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S RVK + H PWILASL+SG + +W+Y+ + F+ + PVR F +
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
C + GH+HYVM +F+PK+ + SASLD+T+++W++G SP +
Sbjct: 130 KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ L+ H +GVN + P +++G+DD K+W +TK+
Sbjct: 179 ----------------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH +NVS V FH + II++ SED ++R+W T T +R W +
Sbjct: 222 -VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYI 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAVSGD-SLFYAKDRFLRY---------YEFSTQK 349
+ G+D G I+ KL RE P ++ + +AK ++ YE +
Sbjct: 281 KSSRRVVIGYDEGTIMVKLGREIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVT--- 337
Query: 350 DTQVIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQD 409
D + +P+ + + P++L ++P V++C D G Y +Y + ++
Sbjct: 338 DGERLPLSVKELGTCDLYPQSLKHNPNGRFVVVCGD---GEYIIYT--------ALAWRN 386
Query: 410 AKKGLGGSAIFIARNRFAVLDKSSN-QVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLC 468
G G ++ + AV + SS ++ KN + K+SI P + + GT +C
Sbjct: 387 RSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQE---KRSIRPTFSAEKIFGGTLLAMC 443
Query: 469 RAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIA--SKKLVHQC-- 524
+ D + +D + ++ + VK + W++ + VA+ S + I ++ LV
Sbjct: 444 -SSDFICFYDWAECRLIQRIDVT-VKNLYWADSGDLVAIASDTSFYILKFNRDLVTSHFD 501
Query: 525 ---------------TLHET-IRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLD 567
LHE RV++G W + FIY + + YC+ G+ + LD
Sbjct: 502 SGRPTEEEGVEDAFEVLHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLD 559
Query: 568 VPIYITK--VSGNTIFCLDRDGKNRAIVIDATEYIFKLSLLRKRYD---HVMSMIRNSQL 622
P+Y+ S + +F +D++ + + +K ++R D ++ I Q
Sbjct: 560 RPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDKASEILPTIPKDQ- 618
Query: 623 CGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVE 682
++ +L+ +G E AL D RF LA++ G ++IA A E+ + W +LG
Sbjct: 619 -HNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGEL 677
Query: 683 ALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLG 742
A+ G + E + + L LY G+ + ++K+ +A+ + F LG
Sbjct: 678 AMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLG 737
Query: 743 DVKERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMPPSPV 802
+++ +++L + +P A + A + V+E +A D + V A SL P
Sbjct: 738 KLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKD-LSKVNSKAAESLADPEEYS 796
Query: 803 VCSGDWPL-LRV------MKGIFEGGLD 823
DW + L V +G++ G D
Sbjct: 797 NLFEDWQVALSVEAKAVETRGVYTGAKD 824
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 259 bits (661), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 216/834 (25%), Positives = 383/834 (45%), Gaps = 91/834 (10%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
KF +S RVK + H PWILASL+SG + +W+Y+ T++ FD + PVR F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
C + GH+HYVM +F+PK+ + SASLD+T+++W++G SP +
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ L+ H +GVN + P +++G+DD K+W +TK+
Sbjct: 179 ----------------FTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH +NVS V FH + II++ SED ++R+W T T +R W +
Sbjct: 222 -VQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHI 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFST-----QKDTQV 353
+ G+D G I+ KL RE P ++ + + +AK + + D +
Sbjct: 281 KGSRRVVIGYDEGSIMVKLGREIPVASMDNSGKIIWAKHNEIHTVNIKSVGADEVTDGER 340
Query: 354 IPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKKG 413
+P+ + + P++L ++P V++C D G Y +Y ++ +
Sbjct: 341 LPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD---GEYIIYT----------ALAWRNRS 387
Query: 414 LGGSAIFI--ARNRFAVLDKSSN-QVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRA 470
G + F+ + AV + S+ ++ KN + KK++ P + + GT +C +
Sbjct: 388 FGSALEFVWSSDGEHAVRESSTKIKIFSKNFQE---KKTVRPTFSAEHIFGGTLLTMC-S 443
Query: 471 EDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIII-------------AS 517
D + +D + ++ + VK + W++ + VA+ S + I
Sbjct: 444 SDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKFNRDIVSSYFDGG 502
Query: 518 KKLVHQCT------LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLDVP 569
K++ + L+ET RV++G W + FIYT + + YC+ G+ + LD P
Sbjct: 503 KQIDEEGIEDAFELLNETNERVRTGLWVGD-CFIYTNSSWRLNYCV-GGEVTTMYHLDRP 560
Query: 570 IYITKVSGNT--IFCLDRDGKNRAIVIDATEYIFKLSLLR---KRYDHVMSMIRNSQLCG 624
+Y+ N ++ +D++ + + +K ++R ++ + V+ I
Sbjct: 561 MYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMRGDLEQANEVLPSIPKEH--H 618
Query: 625 QAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEAL 684
++ +L+ +G E AL D RF LA++ G + +A A E + W +LG A+
Sbjct: 619 NSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKDIAVEAQNESKWKQLGELAM 678
Query: 685 RQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDV 744
G + E + + L LY G+ D + K+ +A+ + F LG V
Sbjct: 679 SSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAKEQGKNNVAFLCLFMLGQV 738
Query: 745 KERVKILESAGHLPLAYITASVHGLQDVAERLAAELGDNVPSVPEGKAPSLLMP 798
++ + +L + +P A + A + V+E +A D P+ A SL P
Sbjct: 739 EDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTKISPKA-AESLADP 791
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 221/853 (25%), Positives = 372/853 (43%), Gaps = 144/853 (16%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K + + RVK + FH PW++AS ++G + +W+Y TL+ FD +D P+R F +
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW- 122
FV G DD++++V+NY + H DYIR + H P+++++SDD TI+ +NW
Sbjct: 69 NWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWD 128
Query: 123 QSRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
S C+ GH+ YVM + +PK+ + S+ LD TV+VW G+
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGS--------------- 173
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPT--LPLIVSGADDRQVKLWRMNETKAW 239
+V + L+ HDRGVN+ ++P P +++ DD +K+W +TKA
Sbjct: 174 ------------SVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDY-QTKAC 220
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V L GH NNVS FH+K II+S SED ++++W + ++++ DR W +A +
Sbjct: 221 -VRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQN 279
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV--SGDSLFYAKDRFLRYY-----EFSTQKDTQ 352
+ L+ G D+G+I F L R+ P+ + SG ++ + + E S D
Sbjct: 280 KDNGLVTVGFDNGLITFSLGRDEPSVTMDSSGKVVWSNYNEVMSAMIRPAKEQSDLTDGS 339
Query: 353 VI--PIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRG-DSVQD 409
+I ++ G+T L P L +SP V +C + + Y + G+ D
Sbjct: 340 LISLSVKELGTTEL--YPAVLKHSPNGRFVSVCGNGEYIVYTALAWRNKAYGKALDFAWS 397
Query: 410 AKKGLGGSAIFIARNRFAVLDKSSNQVLV--KNLKNEVVKKSILPIAADAIFYAGTGNLL 467
A + GS ++S++ +V KN K + L + D IF G L
Sbjct: 398 ADSNVYGS-------------RTSDRSIVIHKNFKES--NRLDLSYSCDKIF--GGFLLG 440
Query: 468 CRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIA--SKKLVHQCT 525
D + +D +++ + K V W++D V L + + ++ +
Sbjct: 441 VVGSDFICFYDWDTGILVRKIDVK-PKGVYWNDDGRFVILACDDDFYLLGFNAEMFYSAV 499
Query: 526 LHETIRVKSGAWDD------------NG-----VFIYTT----LNHI----KYCLPNGDS 560
T + G D NG FIYTT LN++ Y + N +S
Sbjct: 500 ESGTADEEEGVADSFEALADVSESVVNGKWVAETFIYTTTAARLNYLIGDQTYKIANVES 559
Query: 561 GIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYIFKLSLLRKRYDHVMSMIRNS 620
+P + I+ DRD ++ Y F L+++ + S++
Sbjct: 560 SFYLLGYIP------RDDRIYLTDRD-------MNVVSYSFNLAIIEYQ-----SLVLKG 601
Query: 621 QL-CGQAMIA------------YLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASA 667
L Q ++ +L + G+ E AL D RF LAL++ + IA A
Sbjct: 602 DLEAAQGLLEQISETDRPRLSDFLSRLGYKEAALELSGDSVQRFELALDAQRLDIASQIA 661
Query: 668 KEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGN---MDKLSKMLKI 724
+E+D+ W LG AL + + + +++ K++ L LY T N + +LS++ K
Sbjct: 662 QELDDPLKWRSLGDAALNAWDFVLAQECFEKGKDYGSLVLLYTATNNHEGLKELSQLTKS 721
Query: 725 AEVKNDVMGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDV------------ 772
++ N F + E V IL S P A + A+ + +V
Sbjct: 722 TKINNTA---FICSWLTNQPAECVNILTSTQRYPEANLFAATYCPDEVKNVLPEWKVDLT 778
Query: 773 ---AERLAAELGD 782
ER+A LGD
Sbjct: 779 KNQKERIADSLGD 791
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 204/808 (25%), Positives = 368/808 (45%), Gaps = 85/808 (10%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S RVK + H PWIL+SL+SG + +W+Y+ T++ F+ + PVR F +
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFIARK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW- 122
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W
Sbjct: 70 QWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWD 129
Query: 123 QSRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ C + GH+HYVM +F+PK+ + SASLD+TV+VW +G SP +
Sbjct: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLG-------SPDPN---- 178
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ L+GH +GVN + P +++G+DD+ K+W +TK+
Sbjct: 179 ----------------FTLDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDY-QTKSC 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH +NVS V FH + I ++ SED ++R+W T T +R W L
Sbjct: 222 -VQTLEGHAHNVSAVCFHPELPITLTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYM 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFSTQ------KDTQ 352
+ G+D G I+ K+ RE P ++ S + ++K ++ T D +
Sbjct: 281 KGSRRVVIGYDEGTIMIKIGREVPVASMDSSGKIIWSKHNEIQTVNIKTIGADNEIADGE 340
Query: 353 VIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKK 412
+P+ + + P++L ++P V++C D G Y +Y ++ +
Sbjct: 341 RLPLAVKELGTCDLYPQSLRHNPNGRFVVVCGD---GEYIIYT----------ALAWRNR 387
Query: 413 GLGGSAIFI--ARNRFAVLDKSSN-QVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCR 469
G + F+ +AV + +S ++ KN + +KSI P + + G +C
Sbjct: 388 SFGSALEFVWSVDGEYAVRESTSRIKIYSKNFQE---RKSIRPPFSAERIFGGVLLAMC- 443
Query: 470 AEDRVVIFDLQQRLVLGDLQTPFVKYVVW--SNDMESVALLSKHAIIIASKKLVHQCT-- 525
D + D + ++ + VK + W S D+ ++A + I+ ++ +V
Sbjct: 444 TNDFICFHDWAEGRMIRRIDVN-VKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLDG 502
Query: 526 ---------------LHE-TIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVP 569
LHE R+++G W + + + + YC+ G+ + LD
Sbjct: 503 GGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNSSSRLNYCV-GGEVTTLFHLDRQ 561
Query: 570 IYITKVSGNT--IFCLDRDGKNRAIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAM 627
+Y+ N ++ +D+ + T +K ++R +D +++ +
Sbjct: 562 MYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVMRGDFDRANALLPSIPKEQHDS 621
Query: 628 IA-YLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQ 686
+A +L+ +G E AL D RF+LA++ G +++A A A E + W +LG A+
Sbjct: 622 VARFLESQGMLEEALEIATDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMST 681
Query: 687 GNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKE 746
G + E + L LY G+ + L+K+ +A+ + F LG ++E
Sbjct: 682 GKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEE 741
Query: 747 RVKILESAGHLPLAYITASVHGLQDVAE 774
+++L + +P A + + + V E
Sbjct: 742 CLQLLIESNRIPEAALMSRSYLPSKVPE 769
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 204/808 (25%), Positives = 368/808 (45%), Gaps = 85/808 (10%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQ 63
K +S R K + H PWIL+SL+SG + +W+Y+ T++ F+ + PVR F +
Sbjct: 10 KLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFITRK 69
Query: 64 PLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW- 122
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWD 129
Query: 123 QSRTCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
+ C + GH+HYVM +F+PK+ + SASLD+TV+VW +G SP +
Sbjct: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLG-------SPDPN---- 178
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
+ L+GH +GVN + P +++G+DD+ K+W +TK+
Sbjct: 179 ----------------FTLDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDY-QTKSC 221
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASH 299
V TL GH +NVS V FH + II++ SED ++R+W T T +R W L
Sbjct: 222 -VQTLEGHAHNVSAVCFHPELPIILTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYM 280
Query: 300 PEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFST------QKDTQ 352
+ G+D G I+ K+ RE P ++ S + ++K ++ T D +
Sbjct: 281 KGSRRVVIGYDEGTIMIKIGREVPVASMDSSGKIIWSKHNEIQTVNIKTIGADNEIADGE 340
Query: 353 VIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKK 412
+P+ + + P++L ++P V++C D G Y +Y ++ +
Sbjct: 341 RLPLVVKELGTCDLYPQSLRHNPNGRFVVVCGD---GEYIIYT----------ALAWRNR 387
Query: 413 GLGGSAIFI--ARNRFAVLDKSSN-QVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCR 469
G + F+ +AV + +S ++ KN + +KSI P + + G +C
Sbjct: 388 SFGSALEFVWSLDGEYAVRESTSRIKIYSKNFQE---RKSIRPPFSAERIFGGVLLAMC- 443
Query: 470 AEDRVVIFDLQQRLVLGDLQTPFVKYVVW--SNDMESVALLSKHAIIIASKKLVHQC--- 524
D + D + ++ + VK + W S D+ ++A + I+ ++ +V
Sbjct: 444 TNDFICFHDWAEGRMIRRIDVN-VKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLDG 502
Query: 525 --------------TLHE-TIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVP 569
LHE R+++G W + + + + YC+ G+ + LD
Sbjct: 503 GGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNSSSRLNYCV-GGEVTTLFHLDRQ 561
Query: 570 IYITKVSGNT--IFCLDRDGKNRAIVIDATEYIFKLSLLRKRYDHVMSMIRNSQLCGQAM 627
+Y+ N ++ +D+ + T +K ++R +D +++ +
Sbjct: 562 MYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVMRGDFDRANALLPSIPKEQHDS 621
Query: 628 IA-YLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALRQ 686
+A +L+ +G E AL D RF+LA++ G +++A A A E + W +LG A+
Sbjct: 622 VARFLESRGMLEEALEIATDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMST 681
Query: 687 GNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQFHNALYLGDVKE 746
G + E + L LY G+ + L+K+ +A+ + F LG ++E
Sbjct: 682 GKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEE 741
Query: 747 RVKILESAGHLPLAYITASVHGLQDVAE 774
+++L + +P A + + + V E
Sbjct: 742 CLQLLIESNRIPEAALMSRSYLPSKVPE 769
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 209/822 (25%), Positives = 364/822 (44%), Gaps = 102/822 (12%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F +S+RVKG+ FH PW+L +L+SG ++LW+Y + + PVR F +
Sbjct: 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+ G DD++I+V+NY + H DYIR++ H P+++S SDD T+++WNW++
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128
Query: 125 RTCI-SVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRLS 182
+ GH H+VMC +F+PK+ S LD+TV+VW +G S
Sbjct: 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ---------------S 173
Query: 183 QMNTDLFGGVDAVVKYVLEGHDRGVNWAAFH--PTLPLIVSGADDRQVKLWRMNETKAWE 240
N L G +RGVN+ ++ P P +++ +DD +K+W +TK+
Sbjct: 174 TPNFTL-----------TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY-QTKSC- 220
Query: 241 VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP 300
V TL GHM+NVS +FH II+S SED ++++W+ + +T +R W +A+HP
Sbjct: 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280
Query: 301 --EMNLLAAGHDSGMIVFKLERERPAFAV--------SGDSLFYAKDRF---LRYYEFST 347
N +A+G D+G V L + P ++ SG A D F +R E
Sbjct: 281 TGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVE 340
Query: 348 QKDTQVIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSV 407
Q + + + GS + P++L++SP V + D G Y +Y ++
Sbjct: 341 QDEPLSLQTKELGSVDV--FPQSLAHSPNGRFVTVVGD---GEYVIYT----------AL 385
Query: 408 QDAKKGLGGSAIFI---ARNRFAVLDKSSNQVLVKNLKNEVVKKSI-LPIAADAIFYAGT 463
K G F+ N +A++D++ KN K EV S+ + A D +F +
Sbjct: 386 AWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFK-EVTSWSVPMHSAIDRLF---S 441
Query: 464 GNLL-CRAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHA--------II 514
G LL +++ V FD ++ + K V+WS++ E V +++ ++ +
Sbjct: 442 GALLGVKSDGFVYFFDWDNGTLVRRIDVN-AKDVIWSDNGELVMIVNTNSNGDEASGYTL 500
Query: 515 IASKKLVHQCTLHETI------------------RVKSGAWDDNGVFIYTT-LNHIKYCL 555
+ +K + + I + SG W + VFI+TT N + Y +
Sbjct: 501 LFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGD-VFIFTTATNRLNYFV 559
Query: 556 PNGDSGIIR-TLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYIFKLSLLRKRYDHVM 614
+ T ++ + N ++ DR+ I F+ LR + +
Sbjct: 560 GGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAI 619
Query: 615 SMIRNSQLCGQAMIA---YLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEID 671
+ + ++ +L+ + + E AL+ D+ +F LAL+ G + +A +
Sbjct: 620 ENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDES 679
Query: 672 EKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDV 731
+ W LG +L++ N + A+ + E L L+ N + L + K AE
Sbjct: 680 AEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAERAGKF 739
Query: 732 MGQFHNALYLGDVKERVKILESAGHLPLAYITASVHGLQDVA 773
F+ GD++ +L + A S +GL D A
Sbjct: 740 NLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDDA 781
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 186/772 (24%), Positives = 345/772 (44%), Gaps = 90/772 (11%)
Query: 4 KFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFD-EHDGPVRGVHFHKS 62
K T+S+RVK + H PWILASL+ G + +W+Y ++ F+ + PVR F
Sbjct: 10 KLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAK 69
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
+ V+G DD I+V+NY + + H DYIR + H P+I+S+SDD I++W++
Sbjct: 70 KQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Query: 123 QSR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILR 180
+ + V GH+HYVM +++PK+ + +ASLD+TV+VW I +
Sbjct: 130 EKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHP----------- 178
Query: 181 LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKA 238
+ LEGH++G+N + P ++SGADD+ VK+W
Sbjct: 179 ----------------HFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTC 222
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS 298
V TL GH NNVS V +H + +I+S SED ++++W + +T W +
Sbjct: 223 --VQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNF 280
Query: 299 HPEMNLLAAGHDSGMIVFKLERERPAFAV-SGDSLFYAKDRFLRYYEFSTQ-----KDTQ 352
N + G+D G +V K+ + +P ++ G + YAK +R S+ +D +
Sbjct: 281 LRGSNFIGLGYDDGTVVLKIGKNKPPVSMDQGGKVIYAKHNEIRISNISSTLEQEVQDGE 340
Query: 353 VIPIRRPGSTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSVQDAKK 412
+ ++ + P++L ++ V +C D G + +Y ++ K
Sbjct: 341 KLSLQSKDLGNCEVFPQSLQHNSNGRFVSVCGD---GEFIIYT----------ALAWRNK 387
Query: 413 GLGGSAIFI---ARNRFAVLDKSSNQVLVKNLKNEVVKKSILP-IAADAIFYAGTGNLLC 468
G + F+ ++AV + +S + KN K S P +A+ IF G L
Sbjct: 388 SFGNALEFVWAEDSGQYAVRESTSRIKIFKNFKE---THSFKPSFSAEGIF--GGSLLGV 442
Query: 469 RAEDRVVIFDLQQRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIAS--KKLVHQC-- 524
++ D + + ++ ++ K + WS + + +A+++ + I K V +
Sbjct: 443 KSNDTLCFYSWDSADIIRRIEKTSPKNIFWSENGDYLAIVTDKSTFILRYYKDTVQKYIE 502
Query: 525 ---------------TLHETI-RVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDV 568
+HE + +G W + + + YC+ + I L+
Sbjct: 503 SGQPIGELGIENAFDVVHEIEDTIGTGLWVGDCFIYINRSSKLNYCV-GTEVVTISHLEK 561
Query: 569 PIYITKV--SGNTIFCLDRDGKNRAIVIDATEYIFKLSLLR---KRYDHVMSMIRNSQLC 623
+Y+ K ++ D++ + + + ++ S+LR + + ++ I Q
Sbjct: 562 HMYLLKYLPQSGRLYLSDKNLNIVSYKLHISVISYQTSILRGDLEGAERILPKIPQDQ-- 619
Query: 624 GQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEA 683
++ +L+ +G+ E AL D RF LA++ N+ +A A + D + + LG A
Sbjct: 620 RNSIAHFLESQGYKEKALEVSTDLDHRFELAIQLENLDVAHEIALKSDSETKFKHLGDLA 679
Query: 684 LRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLSKMLKIAEVKNDVMGQF 735
L G + E ++ ++ L LY TG+++ + + K++E K F
Sbjct: 680 LSIGEIKLAENCLKKAEDLPGLLLLYTSTGDIEGMKMLAKLSEEKGQTNISF 731
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMG-TLIDRFDEHDGPVRGVHFH 60
+ FE ++ ++ + H P+IL+S I+LWDY G + F+ H V + ++
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
Query: 61 -KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTI 117
K F + D +KVW+ FTL GH I +V++ E P+++S +DD+ +
Sbjct: 153 PKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLV 212
Query: 118 RIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR 168
+IW++QS+TC+ L GH++ V +HP+ L++S S D TV++W R
Sbjct: 213 KIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYR 263
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 29/304 (9%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
F+ ++ V+ + F S + + ++LWD G + H VR V F
Sbjct: 1028 FQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGA 1087
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
+ SGGDD +++W+ CL+TL G+ ++R + F + + S DQ +R+W+ S
Sbjct: 1088 MLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISS 1147
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM 184
+ C+ L GH ++V +F P + S S DQTVR+WDI + +
Sbjct: 1148 KKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSK---------------- 1191
Query: 185 NTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL 244
Y+L+GH VN F+P + SG+ D+ V+LW +N +K + T
Sbjct: 1192 -----------CLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKC--LCTF 1238
Query: 245 RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNL 304
+GH + V+ V+F+ ++ S S DK++R+WD++ + TF+ + +A +P+ ++
Sbjct: 1239 QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSM 1298
Query: 305 LAAG 308
LA+G
Sbjct: 1299 LASG 1302
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L F+ ++ V + F+ + + ++LWD + F H V V F+
Sbjct: 1235 LCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP 1294
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ SG D +++W +CL T GH ++ +V F + + S SDDQT+R+W+
Sbjct: 1295 DGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWS 1354
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
S C+ GH ++V F P ++ S S DQTVR+W I + +
Sbjct: 1355 ISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGK------------- 1401
Query: 182 SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
Y L+GH+ V F P L+ SG+DD+ V+LW ++ + +
Sbjct: 1402 --------------CLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGEC--L 1445
Query: 242 DTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRRE 289
TL GH+N+V V F + I+ S S+D++I++WDV ++T + E
Sbjct: 1446 YTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSE 1493
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+++LWD + H V V F SG D +++W+ +CL+ L G
Sbjct: 1139 IVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQG 1198
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H ++ +V F+ + + S S DQT+R+W S C+ GH +V F+P ++
Sbjct: 1199 HTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLA 1258
Query: 152 SASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD----LFGGVDAVVK--------- 197
S S D+TVR+WDI + + T + + N D G D V+
Sbjct: 1259 SGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKC 1318
Query: 198 -YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+ +GH V+ F P ++ SG+DD+ V+LW ++ + + T GH N V V+F
Sbjct: 1319 LHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGEC--LYTFLGHTNWVGSVIF 1376
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHD 310
I+ S S D+++R+W ++ + T + ++ + P+ LLA+G D
Sbjct: 1377 SPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSD 1430
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 59/334 (17%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
++LWD G + F H VR V F + + SG D +++W+ CL+ G
Sbjct: 929 TVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQG 988
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H ++ +V F+ + + + S DQT+R+W+ S C + GH V F ++
Sbjct: 989 HTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLA 1048
Query: 152 SASLDQTVRVWDIGA-------------LRKKTVSP---------ADDILRLSQMN---- 185
S S DQTVR+WDI + +R SP D I+RL ++
Sbjct: 1049 SGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNC 1108
Query: 186 ---------------------TDLFGGVDAVVK----------YVLEGHDRGVNWAAFHP 214
T G D +V+ Y L+GH VN AF P
Sbjct: 1109 LYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSP 1168
Query: 215 TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRV 274
+ SG+ D+ V+LW ++ +K + L+GH + V+ V+F+ + S S D+++R+
Sbjct: 1169 DGATLASGSGDQTVRLWDISSSKCLYI--LQGHTSWVNSVVFNPDGSTLASGSSDQTVRL 1226
Query: 275 WDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
W++ + TF+ + +P+ ++LA+G
Sbjct: 1227 WEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASG 1260
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 17/328 (5%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L + +N V ++F + + ++LWD + H V V F+
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP 1210
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
SG D +++W +CL T GH ++ +V F+ + + S S D+T+R+W+
Sbjct: 1211 DGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWD 1270
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA-------------LR 168
S C+ GH ++V +F+P ++ S S DQTVR+W+I + +
Sbjct: 1271 ISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVS 1330
Query: 169 KKTVSPADDILRLSQ--MNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
T SP +L L+ Y GH V F P ++ SG+ D+
Sbjct: 1331 SVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQ 1390
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
V+LW ++ K + TL+GH N V ++F ++ S S+D+++R+W+++ + T
Sbjct: 1391 TVRLWSISSGKC--LYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTL 1448
Query: 287 RREHDRFWILASHPEMNLLAAGHDSGMI 314
+ +A + +LA+G D I
Sbjct: 1449 HGHINSVRSVAFSSDGLILASGSDDETI 1476
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G+++ W+ G + H+ V V F + + SG DD +++W+ +CL T
Sbjct: 886 GIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK 945
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH +R+V F + S S DQT+R+W+ S C+ + GH +V +F+ ++
Sbjct: 946 GHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSML 1005
Query: 151 VSASLDQTVRVWDIGA-----LRKKTVSPADDILRLSQMNTDLFGGVDAVVK-------- 197
+ S DQTVR+WDI + + + S ++ S G D V+
Sbjct: 1006 ATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGN 1065
Query: 198 --YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
Y L+GH V F P ++ SG DD+ V+LW ++ + TL+G+ + V ++
Sbjct: 1066 CLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNC--LYTLQGYTSWVRFLV 1123
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
F + + S D+ +R+WD++ + + T + + +A P+ LA+G
Sbjct: 1124 FSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASG 1176
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 29/263 (11%)
Query: 52 GPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSA 111
G V V F LF +G ++ W + L T GH ++ +V F + + S
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924
Query: 112 SDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKT 171
SDDQT+R+W+ S C+ GH V F P ++ S S DQTVR+WDI +
Sbjct: 925 SDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISS----- 979
Query: 172 VSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
Y+ +GH V AF+ ++ +G+ D+ V+LW
Sbjct: 980 ----------------------GECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLW 1017
Query: 232 RMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHD 291
++ ++ + + +GH + V V+F + ++ S S+D+++R+WD++ + T +
Sbjct: 1018 DISSSQCFYI--FQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS 1075
Query: 292 RFWILASHPEMNLLAAGHDSGMI 314
+ P+ +LA+G D ++
Sbjct: 1076 CVRSVVFSPDGAMLASGGDDQIV 1098
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
++LW G + H+ V + F L SG DD +++WN CL+TL G
Sbjct: 1391 TVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHG 1450
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHY 137
H++ +R+V F + + S SDD+TI++W+ ++ CI L Y
Sbjct: 1451 HINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSEKIY 1496
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 130/310 (41%), Gaps = 29/310 (9%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
E + V ++F + + + I++WD GT + H G V V F +
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
SG DD IK+W+ C TL GH +++V F + + S SDD TI+IW+ S
Sbjct: 897 RVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAAS 956
Query: 125 RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM 184
TC L GH V+ +F P V S S D+T+++WD +
Sbjct: 957 GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTAS------------------ 998
Query: 185 NTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL 244
LEGH V AF P + SG+DD+ +K+W TL
Sbjct: 999 ---------GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTC--TQTL 1047
Query: 245 RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNL 304
GH V V+F + S S+D +I++WD T QT D W +A P+
Sbjct: 1048 EGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 1107
Query: 305 LAAGHDSGMI 314
+A+G G I
Sbjct: 1108 VASGSIDGTI 1117
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 116/272 (42%), Gaps = 21/272 (7%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
I++WD GT + H G V V F SG DD IK+W+ C TL G
Sbjct: 990 TIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEG 1049
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H ++++V F + + S SDD TI+IW+ S TC L GH V +F P V
Sbjct: 1050 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 1109
Query: 152 SASLDQTVRVWDI-------------GALRKKTVSPADDILRLSQMNTD----LFGGVDA 194
S S+D T+++WD G + SP D R++ + D ++
Sbjct: 1110 SGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSP--DGQRVASGSIDGTIKIWDAASG 1167
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
LEGH V AF P + SG+ D+ +K+W TL GH V V
Sbjct: 1168 TCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTC--TQTLEGHGGWVQSV 1225
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
F + S S D +I++WD T QT
Sbjct: 1226 AFSPDGQRVASGSSDNTIKIWDTASGTCTQTL 1257
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 107/256 (41%), Gaps = 34/256 (13%)
Query: 59 FHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
F K +P ++S I V + + C TL GH + +V F + + S SDD+TI+
Sbjct: 812 FKKEEPGWIS-----TISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIK 866
Query: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDI 178
IW+ S T L GH V +F P + V S S D+T+++WD +
Sbjct: 867 IWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAAS------------ 914
Query: 179 LRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 238
LEGH V AF P + SG+DD +K+W
Sbjct: 915 ---------------GTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTC 959
Query: 239 WEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAS 298
TL GH ++V V F + S S DK+I++WD T QT W +A
Sbjct: 960 --TQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAF 1017
Query: 299 HPEMNLLAAGHDSGMI 314
P+ +A+G D I
Sbjct: 1018 SPDGQRVASGSDDKTI 1033
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I++WD GT + H G V V F SG D IK+W+ C TL
Sbjct: 1115 GTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE 1174
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLV 150
GH ++++V F + + S S D+TI+IW+ S TC L GH +V +F P V
Sbjct: 1175 GHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRV 1234
Query: 151 VSASLDQTVRVWDIGA 166
S S D T+++WD +
Sbjct: 1235 ASGSSDNTIKIWDTAS 1250
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 31 GVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLL 90
G I++WD GT + H G V+ V F SG D IK+W+ C TL
Sbjct: 1157 GTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLE 1216
Query: 91 GHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
GH ++++V F + + S S D TI+IW+ S TC L C SF
Sbjct: 1217 GHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTLN-VGSTATCLSF 1268
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 5 FETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQP 64
E V+ ++F + + I++WD GT + H G V+ V F
Sbjct: 1173 LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQ 1232
Query: 65 LFVSGGDDYKIKVWNYKMHRCLFTL 89
SG D IK+W+ C TL
Sbjct: 1233 RVASGSSDNTIKIWDTASGTCTQTL 1257
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 17/312 (5%)
Query: 12 VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGD 71
V+ ++F + +S I+LWD G + H G VR V F SG
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSG 830
Query: 72 DYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVL 131
D IK+WNY CL T +GH + + ++ + + +VS S D+TI++W+ Q+ CI L
Sbjct: 831 DRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTL 890
Query: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDILRLS---QMNT 186
GH + V +F P + SLDQ+VR+W+ G K D L ++
Sbjct: 891 HGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQI 950
Query: 187 DLFGGVDAVV--------KYV--LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
G D V KY+ LEGH + AF P + S + D V+LW ++
Sbjct: 951 LASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTG 1010
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWIL 296
+ +++ L H + V V+FH + II + S D ++++W+++ ++T D+ +
Sbjct: 1011 QCFQI--LLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGM 1068
Query: 297 ASHPEMNLLAAG 308
A P+ LLA+
Sbjct: 1069 AWSPDGQLLASA 1080
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 17/314 (5%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
+ V ++FH + ++ I+LWD + GT + H VR V F S
Sbjct: 727 HEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASS 786
Query: 70 GDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129
D+ IK+W+ +CL TL H ++R+V F + + S S D+TI+IWN+ + C+
Sbjct: 787 AADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLK 846
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD------IGALRKKT-----VSPADDI 178
GH + V ++ P ++VS S D+T+++WD I L T V+ + D
Sbjct: 847 TYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDG 906
Query: 179 LRLSQMNTDLFGGV-DAVVKYVLEGHDRGVNWA---AFHPTLPLIVSGADDRQVKLWRMN 234
L+ ++ D + + L+ +WA AF P ++ SG++D+ VKLW
Sbjct: 907 QTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQ 966
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
K + +L GH + + + F + S S D S+R+W+++ Q D +
Sbjct: 967 TGKY--ISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVY 1024
Query: 295 ILASHPEMNLLAAG 308
+ HP+ ++A G
Sbjct: 1025 AVVFHPQGKIIATG 1038
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 37/355 (10%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
+++W+ + G L+ H VR V F + S G D +K+W+ + C+ TL GH
Sbjct: 666 VRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGH 725
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
+ +V FH + + SAS D+TI++W+ Q TC+ LTGH +V C +F P + + S
Sbjct: 726 EHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLAS 785
Query: 153 ASLDQTVRVWDIG---ALRK--------KTVSPADDILRLSQMNTDL------FGGVDAV 195
++ D T+++WD+ LR ++V+ + D L+ + D + + +
Sbjct: 786 SAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECL 845
Query: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVM 255
Y+ GH V A+ P ++VSG+ DR +KLW + TL GH N V V
Sbjct: 846 KTYI--GHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHIC--IKTLHGHTNEVCSVA 901
Query: 256 FHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHD----- 310
F + S D+S+R+W+ ++ + D +A P+ +LA+G +
Sbjct: 902 FSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVK 961
Query: 311 -----SGMIVFKLERERP---AFAVSGDSLFYAK---DRFLRYYEFSTQKDTQVI 354
+G + LE A S DS A D +R + ST + Q++
Sbjct: 962 LWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQIL 1016
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 15 LSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYK 74
++F R + + + ++LWD++ G I + H + G+ F S D
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSS 1001
Query: 75 IKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
+++WN +C LL H D++ V FH + I + S D T+++WN + C+ L+ H
Sbjct: 1002 VRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEH 1061
Query: 135 NHYVMCASFHPKEDLVVSASLDQTVRVWD------IGALRKKT-------VSPADDILRL 181
+ ++ ++ P L+ SAS DQ+VR+WD +G LR + SP +I+
Sbjct: 1062 SDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIAT 1121
Query: 182 --SQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 239
+ ++ L GH V AF P ++ S + D+ V++W +N K
Sbjct: 1122 CSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCH 1181
Query: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFR 287
+ GH + VS V F +++ S S+D+++R+W+V +Q R
Sbjct: 1182 HI--CIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQILR 1227
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 182/428 (42%), Gaps = 71/428 (16%)
Query: 2 LTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
L ++ + V+ ++F + + + I++W+Y G + + H V + +
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ VSG D IK+W+ + H C+ TL GH + + +V F + + S DQ++R+WN
Sbjct: 863 DSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN 922
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD------IGALRKKT---- 171
++ C+ G+ + + +F P ++ S S D+TV++WD I +L T
Sbjct: 923 CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIY 982
Query: 172 -VSPADDILRLSQMNTD----LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
++ + D L+ +TD L+ +L H V FHP +I +G+ D
Sbjct: 983 GIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADC 1042
Query: 227 QVKLWRMNETK---------------AWEVD-------------------------TLRG 246
VKLW ++ + AW D LRG
Sbjct: 1043 TVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRG 1102
Query: 247 HMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLA 306
H N V +F +II + S D+++++WD + ++T + + +A P+ +LA
Sbjct: 1103 HSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILA 1162
Query: 307 -AGHDSGMIVFKLERERP--------------AFAVSGDSLFY-AKDRFLRYYEFSTQKD 350
A HD + ++ + + AF+ G+ + ++D+ +R + T +
Sbjct: 1163 SASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGEC 1222
Query: 351 TQVIPIRR 358
Q++ +R
Sbjct: 1223 LQILRAKR 1230
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 47 FDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYP 106
F E G + F L + D ++VW K + L GH +++R V F +
Sbjct: 638 FTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGE 697
Query: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
+ S D+ +++W+ + CI LTGH H V +FHP + + SAS D+T+++WDI
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQ- 756
Query: 167 LRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDR 226
D L GH V AF P + S A D
Sbjct: 757 --------------------------DGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADH 790
Query: 227 QVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+KLW +++ K + TL+ H V V F A + S S D++I++W+ ++T+
Sbjct: 791 TIKLWDVSQGKC--LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTY 848
Query: 287 RREHDRFWILASHPEMNLLAAG 308
+ + +A P+ +L +G
Sbjct: 849 IGHTNSVYSIAYSPDSKILVSG 870
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
SNRV F I +++WD++ G + H V + F + S
Sbjct: 1104 SNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILAS 1163
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
D +++W+ +C +GH + +V F + + S S DQT+RIWN ++ C+
Sbjct: 1164 ASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECL 1223
Query: 129 SVLTGHNHY 137
+L Y
Sbjct: 1224 QILRAKRLY 1232
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 16/260 (6%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+I +WD G + + H VR V F L SG DD +++W+ G
Sbjct: 482 LIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEG 541
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H Y+ + F + + S S D T R+WN + T +VL GH YV +F P +V
Sbjct: 542 HTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVA 601
Query: 152 SASLDQTVRVWDIGALRKKTV--SPADDILRL--SQMNTDLFGGVDAVVK---------- 197
S S D T+R+WD+ +++ V +PA++++ L S + L G D+ V
Sbjct: 602 SGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEAL 661
Query: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH 257
+ EGH V AF P L+ SG+DDR ++LW + + E TL GH V V FH
Sbjct: 662 HTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQE--EHTTLEGHTEPVHSVAFH 719
Query: 258 AKQDIIVSNSEDKSIRVWDV 277
+ + S SED +IR+W +
Sbjct: 720 PEGTTLASASEDGTIRIWPI 739
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
++ V ++F + + G I+LWD G D V + F + V
Sbjct: 585 TDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVH 644
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
G D + +W+ L T GH D++R V F + + S SDD+TIR+W+ ++
Sbjct: 645 GSDS-TVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEH 703
Query: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
+ L GH V +FHP+ + SAS D T+R+W I
Sbjct: 704 TTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPI 739
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK-KTVSPADDILRLSQMNTD- 187
+LT V A F P L+ S D+ + VWD+ + + T+ D +R + D
Sbjct: 455 ILTTDREAVAVA-FSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDG 513
Query: 188 ---LFGGVDAVVKY----------VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
G DA V+ V EGH V AF P ++ SG+ D +LW N
Sbjct: 514 ALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLW--N 571
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFW 294
E L+GH + V V F ++ S S D +IR+WDV + +
Sbjct: 572 VATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVV 631
Query: 295 ILASHPEMNLLAAGHDSGMIVFKLERERP------------AFAVSGDSLFYAK---DRF 339
LA P+ ++L G DS + ++ + A A S D A DR
Sbjct: 632 SLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRT 691
Query: 340 LRYYEFSTQKD 350
+R ++ + Q++
Sbjct: 692 IRLWDVAAQEE 702
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 32/266 (12%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H P+ V FH +FVS +D IKVW+Y+ TL GH D ++ V F ++
Sbjct: 121 HRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLA 180
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA--- 166
S S D +++W++ CI LTGH+H V +F P D +VSAS D+T+++W++
Sbjct: 181 SCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYC 240
Query: 167 ----------LRKKTVSPADDIL-RLSQMNTDLFGGVDAV-VKYVLEGHDRGVN---WAA 211
+R SP ++L S +T V++ + VL GH+ V WA+
Sbjct: 241 TKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWAS 300
Query: 212 FHP----TLP-------LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQ 260
HP +LP L+VSG+ DR ++ W +N V L GH N V ++FH
Sbjct: 301 -HPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFV--LIGHDNWVRQLVFHPHG 357
Query: 261 DIIVSNSEDKSIRVWDVTKRTGVQTF 286
+++S S+DK+IRVWD+ R +T
Sbjct: 358 RLLLSASDDKTIRVWDLKNRRCHKTL 383
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 118/258 (45%), Gaps = 42/258 (16%)
Query: 33 IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGH 92
++LWD+ + I HD V V F S VS D IK+W C T +GH
Sbjct: 188 VKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGH 247
Query: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF--HPK---- 146
++IR+V+ E + S S+D TIRIW+ +SR C VL GH H V C ++ HP+
Sbjct: 248 TEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNS 307
Query: 147 -------EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYV 199
L+VS S D+T+R WD+ + +V
Sbjct: 308 LPSSMNSSLLLVSGSRDRTIRFWDVNI---------------------------GICLFV 340
Query: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAK 259
L GHD V FHP L++S +DD+ +++W + + + TL H + V+ + +
Sbjct: 341 LIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNRRCHK--TLNAHSHFVTSLDVNRL 398
Query: 260 QDIIVSNSEDKSIRVWDV 277
++ S D++I +WD
Sbjct: 399 APYAITGSVDQTIHIWDC 416
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 30/201 (14%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLF 189
LTGH + FHP ++ VSAS D +++VWD T F
Sbjct: 117 TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWD--------------------YETGEF 156
Query: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
++ L+GH V AF P+ + S + D QVKLW + + TL GH +
Sbjct: 157 -------EHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQC--IKTLTGHDH 207
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA-G 308
NVS V F D +VS S DK+I++W+V+ +TF + + PE NLLA+
Sbjct: 208 NVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCS 267
Query: 309 HDSGMIVFKLERERPAFAVSG 329
+D + ++ +E + G
Sbjct: 268 NDHTIRIWSVESRECQVVLRG 288
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 41/199 (20%)
Query: 192 VDAV----VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
VDA+ K+ L GH + FHP + VS ++D +K+W ET +E TL+GH
Sbjct: 106 VDAIPRPPAKFTLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDY-ETGEFE-HTLKGH 163
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
++V V F + S S D +++WD T ++T
Sbjct: 164 TDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQCIKTL--------------------T 203
Query: 308 GHDSGMIVFKLERERPAFAVSGDSLFYA-KDRFLRYYEFSTQKDTQVIPIRRPGSTSLNQ 366
GHD + AF SGD L A +D+ ++ +E ST T+ G T +
Sbjct: 204 GHDHNV-------SSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTF----IGHTEWIR 252
Query: 367 SPRTLSYSPTENAVLICSD 385
S R SP N + CS+
Sbjct: 253 SVRP---SPEGNLLASCSN 268
>sp|A0CH87|LIS12_PARTE Lissencephaly-1 homolog 2 OS=Paramecium tetraurelia
GN=GSPATT00007594001 PE=3 SV=1
Length = 403
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 24/297 (8%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
KF+ + +R V ++FH + + ++ G I+LWDY G H V + F
Sbjct: 98 KFKLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAFDP 157
Query: 62 SQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
+ S D IK+W K H C+ TL+GH + TVQF +I+SAS D++I++W
Sbjct: 158 TGKYICSASSDLSIKLWELKNHTCVKTLIGHEHSVSTVQFSDHGDFILSASRDKSIKLWE 217
Query: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
Q+ C + H +V CA F E + S S DQ + +W I +
Sbjct: 218 VQTGFCKKTFSEHQEWVRCAVFSNDEKQMASCSQDQMIYIWVIDS--------------- 262
Query: 182 SQMNTDLFGGVDAV--VKYVLEGHDR---GVNWAAFHPTLPLIVSGADDRQVKLWRMNET 236
Q+ L G V VKYV E + T+ L+VS + D+++K+W N
Sbjct: 263 GQILHQLSGHEHVVEQVKYVPEHGAKQILTQQQQQNIQTINLLVSVSRDKEIKIW--NTI 320
Query: 237 KAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V+ V FH ++S S+DK+IRVW++ ++ + HD+F
Sbjct: 321 LGTNLFTLSGHDNWVNGVSFHPDGVHMLSVSDDKTIRVWNLKEQKQKKKIENAHDKF 377
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 25 LASLHSGVIQLW---DYRMGTLIDRF--DEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWN 79
LA +G IQ D + T ++F + H V V FH + S DD IK+W+
Sbjct: 74 LAQAQAGKIQFNKSDDEQRLTPFEKFKLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWD 133
Query: 80 YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
Y+ TL GH + + F +I SAS D +I++W ++ TC+ L GH H V
Sbjct: 134 YESGHFEKTLKGHTSNVNCLAFDPTGKYICSASSDLSIKLWELKNHTCVKTLIGHEHSVS 193
Query: 140 CASFHPKEDLVVSASLDQTVRVWDI-GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
F D ++SAS D+++++W++ KKT S
Sbjct: 194 TVQFSDHGDFILSASRDKSIKLWEVQTGFCKKTFSE------------------------ 229
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF-- 256
H V A F + S + D+ + +W ++ + + L GH + V V +
Sbjct: 230 ----HQEWVRCAVFSNDEKQMASCSQDQMIYIWVIDSGQI--LHQLSGHEHVVEQVKYVP 283
Query: 257 -HAKQD--------------IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI--LASH 299
H + ++VS S DK I++W+ T + T HD W+ ++ H
Sbjct: 284 EHGAKQILTQQQQQNIQTINLLVSVSRDKEIKIWNTILGTNLFTLSG-HDN-WVNGVSFH 341
Query: 300 PE-MNLLAAGHDSGMIVFKL 318
P+ +++L+ D + V+ L
Sbjct: 342 PDGVHMLSVSDDKTIRVWNL 361
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 29/244 (11%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
++LW + F H G VR V F V+ DD IKVW + LF+L
Sbjct: 83 TVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQ 142
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
H++++R +F + IVSASDD+TI++W+ SR CI H +V FHP +
Sbjct: 143 HINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIA 202
Query: 152 SASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAA 211
+A+ D TV+VWDI R++++ + Y + H VN +
Sbjct: 203 AAATDNTVKVWDI---------------RMNKL----------IQHYQV--HSGVVNSLS 235
Query: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
FHP+ +++ ++D +K+ + E + + TL GH V+CV F + D S D+
Sbjct: 236 FHPSGNYLITASNDSTLKVLDLLEGRL--LYTLHGHQGPVTCVKFSREGDFFASGGSDEQ 293
Query: 272 IRVW 275
+ VW
Sbjct: 294 VMVW 297
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 133/316 (42%), Gaps = 32/316 (10%)
Query: 42 TLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQF 101
+L F H V V F+ + SG D + VWN K + +GH D I +V F
Sbjct: 9 SLERHFKGHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDF 68
Query: 102 HHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
I SAS D+T+R+W + + H V SF +V+AS D+T++V
Sbjct: 69 SPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKV 128
Query: 162 WDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVS 221
W + R+K + + L H V A F P LIVS
Sbjct: 129 WTVH--RQKFL-------------------------FSLNQHINWVRCAKFSPDGRLIVS 161
Query: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRT 281
+DD+ +KLW ++T + + H V+ V FH I + + D +++VWD+
Sbjct: 162 ASDDKTIKLW--DKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNK 219
Query: 282 GVQTFRREHDRFWILASHPEMN-LLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFL 340
+Q ++ L+ HP N L+ A +DS + V L R + + G +F
Sbjct: 220 LIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFS 279
Query: 341 RYYEF--STQKDTQVI 354
R +F S D QV+
Sbjct: 280 REGDFFASGGSDEQVM 295
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 98/249 (39%), Gaps = 27/249 (10%)
Query: 3 TKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKS 62
T F+ + V+ +SF ++ + I++W + ++H VR F
Sbjct: 96 TAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPD 155
Query: 63 QPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
L VS DD IK+W+ C+ + H ++ V FH I +A+ D T+++W+
Sbjct: 156 GRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDI 215
Query: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLS 182
+ I H+ V SFHP + +++AS D T++V D+
Sbjct: 216 RMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDL------------------ 257
Query: 183 QMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
++ + Y L GH V F SG D QV +W+ N D
Sbjct: 258 ---------LEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSDEQVMVWKTNFDAGSYPD 308
Query: 243 TLRGHMNNV 251
L+ N+
Sbjct: 309 LLKYRQNDT 317
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
++ ++ S V LSFH +++ + + +++ D G L+ H GPV V F
Sbjct: 220 LIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFS 279
Query: 61 KSQPLFVSGGDDYKIKVW 78
+ F SGG D ++ VW
Sbjct: 280 REGDFFASGGSDEQVMVW 297
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV V FH L VS +D IKVW+Y+ TL GH D ++ + F +
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
S S D TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC 226
Query: 168 RK---------KTVSPADDILRLSQMNTDLFGGVDAV----VKYVLEGHD---RGVNWA- 210
K + V P D L+ + D V V K L H+ ++WA
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 211 -AFHPTL---------------PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ HPT+ P ++SG+ D+ +K+W ++ + TL GH N V V
Sbjct: 287 ESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMC--LMTLVGHDNWVRGV 344
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+FH +VS ++DK++R+WD + ++T H+ F
Sbjct: 345 LFHPGGRFVVSCADDKTLRIWDYKNKRCMKTL-SAHEHF 382
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++++ I++WDY G H V+ + F ++ L S D IK
Sbjct: 116 FHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIK 175
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNH 136
+W+++ C+ T+ GH + +V IVSAS D+T+++W + C+ TGH
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Query: 137 YVMCASFHPKEDLVVSASLDQTVRVWDI-------------------------------- 164
+V + L+ S S DQTVRVW +
Sbjct: 236 WVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISE 295
Query: 165 --GALRKKTVSPADDILRLSQMNT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVS 221
G+ KK+ P +L S+ T ++ + L GHD V FHP +VS
Sbjct: 296 ATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVS 355
Query: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
ADD+ +++W + + TL H + V+ + FH +V+ S D++++VW+
Sbjct: 356 CADDKTLRIWDYKNKRC--MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWEC 409
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 79/180 (43%), Gaps = 33/180 (18%)
Query: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLF 189
L+GH V FHP L+VSAS D T++VWD A D R
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDY---------EAGDFER--------- 144
Query: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
L+GH V +F T L+ S + D +KLW + + T+ GH +
Sbjct: 145 ---------TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFEC--IRTMHGHDH 193
Query: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN--LLAA 307
NVS V D IVS S DK++++W+V V+TF R W+ P + LLA+
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGH--REWVRMVRPNQDGTLLAS 251
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
KY L GH V FHP L+VS ++D +K+W E +E TL+GH ++V + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDY-EAGDFE-RTLKGHTDSVQDISF 158
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
++ S S D +I++WD G + R H
Sbjct: 159 DQTGKLLASCSADMTIKLWDF---QGFECIRTMH 189
>sp|A0DB19|LIS11_PARTE Lissencephaly-1 homolog 1 OS=Paramecium tetraurelia
GN=GSPATT00015130001 PE=3 SV=1
Length = 403
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 139/299 (46%), Gaps = 24/299 (8%)
Query: 2 LTKFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHF 59
+ KF+ + +R V ++FH + + ++ G I+LWDY G H V + F
Sbjct: 96 IEKFKLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGHFEKTLKGHTSNVNCLAF 155
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
+ S D IK+W K H C+ TL+GH + TVQF +I+SAS D+ I++
Sbjct: 156 DPTGKYICSASSDLSIKIWELKNHTCVKTLIGHEHSVSTVQFSDHGDFILSASRDKNIKL 215
Query: 120 WNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIL 179
W + C + H +V CA F E + S S DQ + +W I +
Sbjct: 216 WEVATGFCKKTFSEHQEWVRCAVFSNDEKQIASCSQDQMIYIWVIDS------------- 262
Query: 180 RLSQMNTDLFGGVDAV--VKYVLEGHDR---GVNWAAFHPTLPLIVSGADDRQVKLWRMN 234
Q+ L G V VKY+ E + T+ L+VS + D+++K+W N
Sbjct: 263 --GQVLHQLSGHEHVVEQVKYIPEHGAKQILTQQQQQNIQTINLLVSVSRDKEIKIW--N 318
Query: 235 ETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+ TL GH N V+ V FH ++S S+DK+IRVW++ ++ + HD+F
Sbjct: 319 TILGTNLFTLSGHDNWVNGVSFHPDGVHMLSVSDDKTIRVWNLKEQKQKKKIENAHDKF 377
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 25 LASLHSGVIQLW---DYRMGTLIDRF--DEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWN 79
LA +G IQ D + T I++F + H V V FH + S DD IK+W+
Sbjct: 74 LAQAQAGKIQFNKSDDEQRLTPIEKFKLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWD 133
Query: 80 YKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVM 139
Y+ TL GH + + F +I SAS D +I+IW ++ TC+ L GH H V
Sbjct: 134 YESGHFEKTLKGHTSNVNCLAFDPTGKYICSASSDLSIKIWELKNHTCVKTLIGHEHSVS 193
Query: 140 CASFHPKEDLVVSASLDQTVRVWDIGA-LRKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
F D ++SAS D+ +++W++ KKT S
Sbjct: 194 TVQFSDHGDFILSASRDKNIKLWEVATGFCKKTFSE------------------------ 229
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF-- 256
H V A F I S + D+ + +W ++ + + L GH + V V +
Sbjct: 230 ----HQEWVRCAVFSNDEKQIASCSQDQMIYIWVIDSGQV--LHQLSGHEHVVEQVKYIP 283
Query: 257 -HAKQD--------------IIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWI--LASH 299
H + ++VS S DK I++W+ T + T HD W+ ++ H
Sbjct: 284 EHGAKQILTQQQQQNIQTINLLVSVSRDKEIKIWNTILGTNLFTLSG-HDN-WVNGVSFH 341
Query: 300 PE-MNLLAAGHDSGMIVFKL 318
P+ +++L+ D + V+ L
Sbjct: 342 PDGVHMLSVSDDKTIRVWNL 361
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 131/298 (43%), Gaps = 21/298 (7%)
Query: 30 SGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTL 89
SG+ + + +L+ H V + F +G D +IKVWN L TL
Sbjct: 192 SGITKKPENGEFSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTL 251
Query: 90 LGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDL 149
H I + +I SASDD T++I++ S C+ + GH +YV C SF+P+ L
Sbjct: 252 ASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSL 311
Query: 150 VVSASLDQTVRVWDI--GALRKKTVSPADDILRLS------QMNTDLFGGV--------D 193
+ SA D+TVRVWD G K + +D I +S M T + G
Sbjct: 312 IASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASG 371
Query: 194 AVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSC 253
+ +K +++ V + F P ++S D +KLW + KA + GH N C
Sbjct: 372 SCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLW--DPKKAKPLKYYNGHKNKKYC 429
Query: 254 VMFHAKQDI---IVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + + I+S SED I VW + + VQ SHP +N++A+G
Sbjct: 430 LFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNIIASG 487
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 35/233 (15%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
+N V SF+ + I ++ +++WD++ G + H P+ + ++ +
Sbjct: 297 TNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMAT 356
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDY--IRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
D I+VW+ CL TL+ D+ + V F +++SA D ++++W+ +
Sbjct: 357 SSYDGCIRVWDAASGSCLKTLV-DTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAK 415
Query: 127 CISVLTGHNH--YVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQ 183
+ GH + Y + A+ P ++S S D + VW I +
Sbjct: 416 PLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQ--------------- 460
Query: 184 MNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWRMN 234
+ +LEGH V HPTL +I SG D +++WR N
Sbjct: 461 ------------IVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIWRRN 501
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 29/187 (15%)
Query: 128 ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTD 187
+ ++GH V F + + S D+ ++VW+
Sbjct: 206 VKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNT----------------------- 242
Query: 188 LFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
VD L H G+N ++ I S +DD VK++ + + T+RGH
Sbjct: 243 ----VDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGAC--LRTMRGH 296
Query: 248 MNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAA 307
N V C F+ + +I S D+++RVWD V+ D ++ + + N +A
Sbjct: 297 TNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMAT 356
Query: 308 GHDSGMI 314
G I
Sbjct: 357 SSYDGCI 363
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 40/312 (12%)
Query: 4 KFETKSNR--VKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHK 61
KF +R + + FH +L++ VI++WD+ G H V+ + F
Sbjct: 101 KFSLSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDS 160
Query: 62 SQPLFVSGGDDYKIKVWNYKM-HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
L S D IK+W+++ + C+ T+LGH + +V F +++SAS DQTI++W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMW 220
Query: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADD--- 177
+ C+ +GH ++ H ++ S S+D ++R+W I + K A D
Sbjct: 221 EVATGYCVKTYSGHREWIRMVRVHMDGNIFASCSIDHSIRIWSINSRDCKAELRAHDHTV 280
Query: 178 -----ILRLSQMNTDLFGGVD---------------------------AVVKYVLEGHDR 205
+S + + G D + +VL GHD
Sbjct: 281 ECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLTGHDN 340
Query: 206 GVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVS 265
V FHP +VS +DD+ +++W + + + TL H + + V FH K ++S
Sbjct: 341 WVRELTFHPGGKYLVSASDDKTIRVWDLRNKRF--MKTLYAHQHFCTSVDFHKKLPYVIS 398
Query: 266 NSEDKSIRVWDV 277
S D +++VW+
Sbjct: 399 GSVDNTVKVWEC 410
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 34/258 (13%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
F+L GH I V FH Y ++SAS+D I+IW++++ L GH V +F +
Sbjct: 102 FSLSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQ 161
Query: 147 EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
L+ S S D ++++WD Q + D VK +L GHD
Sbjct: 162 GKLLASCSADLSIKLWDF------------------QQSYD-------CVKTML-GHDHN 195
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V+ AF P ++S + D+ +K+W + + V T GH + V H +I S
Sbjct: 196 VSSVAFVPAGDYVLSASRDQTIKMWEV--ATGYCVKTYSGHREWIRMVRVHMDGNIFASC 253
Query: 267 SEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFA 326
S D SIR+W + R R +A P+++ +G K + P F
Sbjct: 254 SIDHSIRIWSINSRDCKAELRAHDHTVECIAWAPDISTTHINEAAGSDNKKGHHQGP-FL 312
Query: 327 VSGDSLFYAKDRFLRYYE 344
SG ++D+ +R ++
Sbjct: 313 ASG-----SRDKTIRVWD 325
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV V FH + VS +D IKVW+Y+ TL GH D I+ + F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
S S D TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 168 RK---------KTVSPADDILRLSQMNTDLFGGVDAV----VKYVLEGHDRGVNWAAFHP 214
K + V P D ++ + D V V K L H+ V ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 215 TL--------------------PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P ++SG+ D+ +K+W ++ + TL GH N V V
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-NAHEHF 382
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 24 ILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKM 82
+LAS + + I+LWD++ I HD V V + VS D IK+W +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 83 HRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCAS 142
C+ T GH +++R V+ + + I S S+DQT+R+W ++ C + L H H V C S
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 143 FHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT-DLFGGVDAVVKYVLE 201
+ P+ +S+ + G+ KK+ P +L S+ T ++ + L
Sbjct: 284 WAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 202 GHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQD 261
GHD V FH I+S ADD+ +++W + + TL H + V+ + FH
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHKTAP 393
Query: 262 IIVSNSEDKSIRVWDV 277
+V+ S D++++VW+
Sbjct: 394 YVVTGSVDQTVKVWEC 409
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+ L GH + V FH + +VSAS+D TI++W++++ L GH + F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHS 161
Query: 147 EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
L+ S S D T+++WD F G + + + GHD
Sbjct: 162 GKLLASCSADMTIKLWD-------------------------FQGFECI--RTMHGHDHN 194
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V+ A P IVS + D+ +K+W + + V T GH V V + +I S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 267 SEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFA 326
S D+++RVW V + R ++ PE + + +G K + P F
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP-FL 311
Query: 327 VSGDSLFYAKDRFLRYYEFST 347
+SG ++D+ ++ ++ ST
Sbjct: 312 LSG-----SRDKTIKMWDVST 327
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 22 PWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYK 81
P++L+ I++WD G + HD VRGV FH +S DD ++VW+YK
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 82 MHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
RC+ TL H ++ ++ FH P++V+ S DQT+++W
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
KY L GH V FHP ++VS ++D +K+W ET +E TL+GH +++ + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSIQDIPF 158
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
++ S S D +I++WD G + R H
Sbjct: 159 DHSGKLLASCSADMTIKLWDF---QGFECIRTMH 189
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
N V+G+ FHS +IL+ +++WDY+ + + H+ V + FHK+ P V+G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 70 GDDYKIKVWNYK 81
D +KVW +
Sbjct: 399 SVDQTVKVWECR 410
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 127/292 (43%), Gaps = 8/292 (2%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++ S +++WDY G H V+ + F + S D IK
Sbjct: 114 FHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHTGKFLASSSADMTIK 173
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNH 136
+W+++ C+ TL GH + ++ F +VSAS D+TI++W + C+ GH
Sbjct: 174 LWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVSASRDKTIKMWEIATGYCVKTFQGHGE 233
Query: 137 YVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVV 196
+V + L+ S S DQT+RVW + + K D+ + DL ++
Sbjct: 234 WVRRVRPNADGSLIASCSNDQTIRVWVVASRECKC-----DLRDHDHVIEDLNWAPESAT 288
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+ E A P P +VS + D+ +K+W ++ + TL GH N V VMF
Sbjct: 289 PVINEAAGVEGGKKAMSPG-PFLVSASRDKSIKIWDVSAGVC--LVTLVGHDNWVRAVMF 345
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
H IVS S+DK++R+WD + +T L H +A G
Sbjct: 346 HPGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSAPFVATG 397
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 50/290 (17%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVS 68
++ V+ L+F ++ +S I+LWD++ I HD V + F S VS
Sbjct: 148 TDAVQDLAFDHTGKFLASSSADMTIKLWDFQGFECIRTLHGHDHNVSSISFLPSGDHLVS 207
Query: 69 GGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCI 128
D IK+W C+ T GH +++R V+ + + I S S+DQTIR+W SR C
Sbjct: 208 ASRDKTIKMWEIATGYCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWVVASRECK 267
Query: 129 SVLTGHNHYVMCASFHPKE---------------------DLVVSASLDQTVRVWDIGAL 167
L H+H + ++ P+ +VSAS D+++++WD+ A
Sbjct: 268 CDLRDHDHVIEDLNWAPESATPVINEAAGVEGGKKAMSPGPFLVSASRDKSIKIWDVSA- 326
Query: 168 RKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQ 227
V L GHD V FHP IVS +DD+
Sbjct: 327 --------------------------GVCLVTLVGHDNWVRAVMFHPGGKFIVSCSDDKT 360
Query: 228 VKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
+++W + TL H + V+ + FH + + S D +++VW+
Sbjct: 361 LRIWDYKNKRC--AKTLVAHEHFVTTLDFHKSAPFVATGSVDLTLKVWEC 408
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+TL GH I V FH Y +V++S+D T+++W++++ L GH V +F
Sbjct: 100 YTLTGHRSPITKVLFHPVYSVMVTSSEDATVKVWDYETGDFERTLKGHTDAVQDLAFDHT 159
Query: 147 EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
+ S+S D T+++WD F G + + L GHD
Sbjct: 160 GKFLASSSADMTIKLWD-------------------------FQGFECI--RTLHGHDHN 192
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V+ +F P+ +VS + D+ +K+W + + V T +GH V V +A +I S
Sbjct: 193 VSSISFLPSGDHLVSASRDKTIKMWEI--ATGYCVKTFQGHGEWVRRVRPNADGSLIASC 250
Query: 267 SEDKSIRVWDVTKRTGVQTFRREHD 291
S D++IRVW V R + R+HD
Sbjct: 251 SNDQTIRVWVVASRE-CKCDLRDHD 274
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 43/184 (23%)
Query: 165 GALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGAD 224
G KKT SP D I R + +Y L GH + FHP ++V+ ++
Sbjct: 80 GGGPKKTRSPEDWIPRPPE-------------RYTLTGHRSPITKVLFHPVYSVMVTSSE 126
Query: 225 DRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQ 284
D VK+W ET +E TL+GH + V + F + S+S D +I++WD G +
Sbjct: 127 DATVKVWDY-ETGDFE-RTLKGHTDAVQDLAFDHTGKFLASSSADMTIKLWDF---QGFE 181
Query: 285 TFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYA-KDRFLRYY 343
R H GHD + +F SGD L A +D+ ++ +
Sbjct: 182 CIRTLH-----------------GHDHNVSSI-------SFLPSGDHLVSASRDKTIKMW 217
Query: 344 EFST 347
E +T
Sbjct: 218 EIAT 221
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 170 -KTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH---AKQDIIVSNSEDK 270
P I++ D +KLW ++ K + T GH N C+ + IVS SED
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ +W++ + VQ + D A HP N++A+
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+++WD G + H V +F+ L VSG D +++W+ K +CL TL
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT-GHNHYVMCASFHPKEDLV 150
H D + V F+ + IVS+S D RIW+ S C+ L N V F P +
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
++A+LD T+++WD + + Y +++ +A
Sbjct: 230 LAATLDNTLKLWD-------------------------YSKGKCLKTYTGHKNEKYCIFA 264
Query: 211 AFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS-- 267
F T IVSG++D V +W + + V L+GH + V H ++II S +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 268 EDKSIRVW 275
DK+I++W
Sbjct: 323 NDKTIKLW 330
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NY + FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 34 NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
++ +L+VSAS D+T+++WD+ + + L+
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGK---------CLK------------------ 123
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
L+GH V F+P LIVSG+ D V++W + K + TL H + VS V F+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNR 181
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+IVS+S D R+WD ++T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHF 59
L S+ V + F+ I++S + G+ ++WD G + D+ + PV V F
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFH-HEYPWIVSASDDQT 116
+ ++ D +K+W+Y +CL T GH + Y F WIVS S+D
Sbjct: 223 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ IWN Q++ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
L + SN V +F+ + I++ +++WD + G + H PV VHF+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VS D ++W+ +CL TL+ + + V+F +I++A+ D T+++
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 120 WNWQSRTCISVLTGHNH--YVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPAD 176
W++ C+ TGH + Y + A+F +VS S D V +W+
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN------------- 287
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+ ++ L G D V+ A HPT +I S A +D+ +KLW+
Sbjct: 288 --LQTKEIVQKLQGHTDVVIS------------TACHPTENIIASAALENDKTIKLWK 331
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+K+ L GH + V+ F P + S + D+ +K+W + K T+ GH +S V
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDV 93
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 170 -KTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH---AKQDIIVSNSEDK 270
P I++ D +KLW ++ K + T GH N C+ + IVS SED
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ +W++ + VQ + D A HP N++A+
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+++WD G + H V +F+ L VSG D +++W+ K +CL TL
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT-GHNHYVMCASFHPKEDLV 150
H D + V F+ + IVS+S D RIW+ S C+ L N V F P +
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
++A+LD T+++WD + + Y +++ +A
Sbjct: 230 LAATLDNTLKLWD-------------------------YSKGKCLKTYTGHKNEKYCIFA 264
Query: 211 AFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS-- 267
F T IVSG++D V +W + + V L+GH + V H ++II S +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 268 EDKSIRVW 275
DK+I++W
Sbjct: 323 NDKTIKLW 330
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NY + FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 34 NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
++ +L+VSAS D+T+++WD+ + + L+
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGK---------CLK------------------ 123
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
L+GH V F+P LIVSG+ D V++W + K + TL H + VS V F+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNR 181
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+IVS+S D R+WD ++T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHF 59
L S+ V + F+ I++S + G+ ++WD G + D+ + PV V F
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFH-HEYPWIVSASDDQT 116
+ ++ D +K+W+Y +CL T GH + Y F WIVS S+D
Sbjct: 223 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ IWN Q++ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
L + SN V +F+ + I++ +++WD + G + H PV VHF+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VS D ++W+ +CL TL+ + + V+F +I++A+ D T+++
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 120 WNWQSRTCISVLTGHNH--YVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPAD 176
W++ C+ TGH + Y + A+F +VS S D V +W+
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN------------- 287
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+ ++ L G D V+ A HPT +I S A +D+ +KLW+
Sbjct: 288 --LQTKEIVQKLQGHTDVVIS------------TACHPTENIIASAALENDKTIKLWK 331
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+K+ L GH + V+ F P + S + D+ +K+W + K T+ GH +S V
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDV 93
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 170 -KTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH---AKQDIIVSNSEDK 270
P I++ D +KLW ++ K + T GH N C+ + IVS SED
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ +W++ + VQ + D A HP N++A+
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+++WD G + H V +F+ L VSG D +++W+ K +CL TL
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT-GHNHYVMCASFHPKEDLV 150
H D + V F+ + IVS+S D RIW+ S C+ L N V F P +
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
++A+LD T+++WD + + Y +++ +A
Sbjct: 230 LAATLDNTLKLWD-------------------------YSKGKCLKTYTGHKNEKYCIFA 264
Query: 211 AFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS-- 267
F T IVSG++D V +W + + V L+GH + V H ++II S +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 268 EDKSIRVW 275
DK+I++W
Sbjct: 323 NDKTIKLW 330
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NY + FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 34 NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
++ +L+VSAS D+T+++WD+ + + L+
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGK---------CLK------------------ 123
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
L+GH V F+P LIVSG+ D V++W + K + TL H + VS V F+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNR 181
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+IVS+S D R+WD ++T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHF 59
L S+ V + F+ I++S + G+ ++WD G + D+ + PV V F
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFH-HEYPWIVSASDDQT 116
+ ++ D +K+W+Y +CL T GH + Y F WIVS S+D
Sbjct: 223 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ IWN Q++ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
L + SN V +F+ + I++ +++WD + G + H PV VHF+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VS D ++W+ +CL TL+ + + V+F +I++A+ D T+++
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 120 WNWQSRTCISVLTGHNH--YVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPAD 176
W++ C+ TGH + Y + A+F +VS S D V +W+
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN------------- 287
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+ ++ L G D V+ A HPT +I S A +D+ +KLW+
Sbjct: 288 --LQTKEIVQKLQGHTDVVIS------------TACHPTENIIASAALENDKTIKLWK 331
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+K+ L GH + V+ F P + S + D+ +K+W + K T+ GH +S V
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDV 93
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 20/278 (7%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H + V F S D IK+W + TL GH + I + + + I
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLIC 104
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALR- 168
SASDD+TI+IW+ +S + L GH YV SF+P+ +L+VS S D+ VR+WD+
Sbjct: 105 SASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGEC 164
Query: 169 KKTVSPADDILRLSQMNTD----LFGGVDAVVKY----------VLEGHD-RGVNWAAFH 213
K +S D + N D + G D V+ + D + V++ F
Sbjct: 165 TKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFS 224
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDI---IVSNSEDK 270
P +++G D ++LW N K + T GH N C+ IV+ SED
Sbjct: 225 PNGKFVLAGTLDNTLRLWSYNNNKKC-LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDN 283
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
I ++++ R VQT D +A HP N++A+G
Sbjct: 284 LIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 9 SNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGP-VRGVHFHKSQPLFV 67
S+ V G+ F+ +++ + G +++WD G L++ DG V V F + +
Sbjct: 172 SDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVL 231
Query: 68 SGGDDYKIKVWNYKMH-RCLFTLLGHLD--YIRTVQFHHEY-PWIVSASDDQTIRIWNWQ 123
+G D +++W+Y + +CL T GH + Y F WIV+ S+D I I+N Q
Sbjct: 232 AGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQ 291
Query: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+R + L GH V+ + HP E+++ S +L D++V++W
Sbjct: 292 TREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
++KY L+GH + ++ F P + S + D+ +K+W + K TL GH +S +
Sbjct: 37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKF--ERTLEGHKEGISDI 94
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ +I S S+DK+I++WDV V+T + + + ++ +P+ NL+ +G
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSG 148
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 37/272 (13%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV V FH + VS +D IKVW+Y+ TL GH D ++ + F +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIG-ALR 168
S S D TI++W++QS CI + GH+H V + P D ++SAS D+T+++W++
Sbjct: 167 SCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYC 226
Query: 169 KKTVSPADDILRLSQMNTD--------------LFGGVDAVVKYVLEGHD---RGVNWA- 210
KT + + +R+ + N D ++ K L H+ ++WA
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAP 286
Query: 211 -AFHPTL---------------PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+ HPT+ P ++SG+ D+ +K+W ++ + TL GH N V V
Sbjct: 287 ESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+FH IV+ ++DK++R+WD + ++T
Sbjct: 345 LFHPGGKFIVTCADDKTLRIWDYKNKRCMKTL 376
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 37/296 (12%)
Query: 17 FHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIK 76
FH ++++ I++WDY G H V+ + F + L S D IK
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIK 175
Query: 77 VWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNH 136
+W+++ C+ T+ GH + +V I+SAS D+T+++W + C+ TGH
Sbjct: 176 LWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHRE 235
Query: 137 YVMCASFHPKEDLVVSASLDQTVRVWDIGA------LR---------------------- 168
+V + L+ S S DQTVRVW + + LR
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILD 295
Query: 169 ------KKTVSPADDILRLSQMNT-DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVS 221
KK+ P +L S+ T ++ + L GHD V FHP IV+
Sbjct: 296 ATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVT 355
Query: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
ADD+ +++W + + TL H + V+ + FH +V+ S D++++VW+
Sbjct: 356 CADDKTLRIWDYKNKRC--MKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWEC 409
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 31/173 (17%)
Query: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFG 190
L+GH V FHP ++VSAS D T++VWD D R
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY---------ETGDFER---------- 144
Query: 191 GVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNN 250
L+GH V +F T L+ S + D +KLW + + T+ GH +N
Sbjct: 145 --------TLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSFEC--IRTMHGHDHN 194
Query: 251 VSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN 303
VS V D I+S S DK++++W+V V+TF R W+ P +
Sbjct: 195 VSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGH--REWVRMVRPNQD 245
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
+Y L GH V FHP ++VS ++D +K+W ET +E TL+GH ++V + F
Sbjct: 101 RYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMN-LLAAGHDSGMIV 315
++ S S D +I++WD ++T +A P + +++A D M +
Sbjct: 159 DLTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKM 218
Query: 316 FKL 318
+++
Sbjct: 219 WEV 221
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 10 NRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSG 69
N V+G+ FH +I+ +++WDY+ + H+ V + FHK+ P V+G
Sbjct: 339 NWVRGVLFHPGGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTG 398
Query: 70 GDDYKIKVWNYK 81
D +KVW +
Sbjct: 399 SVDQTVKVWECR 410
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H V V F + S D IK+W + T+ GH I V + + +V
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV 103
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRK 169
SASDD+T++IW+ S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ +
Sbjct: 104 SASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 163
Query: 170 -KTVSPADDILRLSQMNTD-------LFGGVDAV--------VKYVLEGHDRGVNWAAFH 213
KT+ D + N D + G+ + +K +++ + V++ F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 214 PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFH---AKQDIIVSNSEDK 270
P I++ D +KLW ++ K + T GH N C+ + IVS SED
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 281
Query: 271 SIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ +W++ + VQ + D A HP N++A+
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 31/248 (12%)
Query: 32 VIQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLG 91
+++WD G + H V +F+ L VSG D +++W+ K +CL TL
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLT-GHNHYVMCASFHPKEDLV 150
H D + V F+ + IVS+S D RIW+ S C+ L N V F P +
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 151 VSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWA 210
++A+LD T+++WD + + Y +++ +A
Sbjct: 230 LAATLDNTLKLWD-------------------------YSKGKCLKTYTGHKNEKYCIFA 264
Query: 211 AFHPT-LPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNS-- 267
F T IVSG++D V +W + + V L+GH + V H ++II S +
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEI--VQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 268 EDKSIRVW 275
DK+I++W
Sbjct: 323 NDKTIKLW 330
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 79 NYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYV 138
NY + FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 34 NYALK---FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 139 MCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKY 198
++ +L+VSAS D+T+++WD+ + + L+
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGK---------CLK------------------ 123
Query: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHA 258
L+GH V F+P LIVSG+ D V++W + K + TL H + VS V F+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHFNR 181
Query: 259 KQDIIVSNSEDKSIRVWDVTKRTGVQTF 286
+IVS+S D R+WD ++T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRF-DEHDGPVRGVHF 59
L S+ V + F+ I++S + G+ ++WD G + D+ + PV V F
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
Query: 60 HKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD--YIRTVQFH-HEYPWIVSASDDQT 116
+ ++ D +K+W+Y +CL T GH + Y F WIVS S+D
Sbjct: 223 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 282
Query: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL--DQTVRVW 162
+ IWN Q++ + L GH V+ + HP E+++ SA+L D+T+++W
Sbjct: 283 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH 60
L + SN V +F+ + I++ +++WD + G + H PV VHF+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 61 KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRI 119
+ L VS D ++W+ +CL TL+ + + V+F +I++A+ D T+++
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 120 WNWQSRTCISVLTGHNH--YVMCASFH-PKEDLVVSASLDQTVRVWDIGALRKKTVSPAD 176
W++ C+ TGH + Y + A+F +VS S D V +W+
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN------------- 287
Query: 177 DILRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGA--DDRQVKLWR 232
L+ ++ L G D V+ A HPT +I S A +D+ +KLW+
Sbjct: 288 --LQTKEIVQKLQGHTDVVIS------------TACHPTENIIASAALENDKTIKLWK 331
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 195 VVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
+K+ L GH + V+ F P + S + D+ +K+W + K T+ GH +S V
Sbjct: 36 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDV 93
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAG 308
+ + +++VS S+DK++++WDV+ ++T + + + +P+ NL+ +G
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV V FH + VS +D IKVW+Y+ TL GH D ++ + F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
S S D TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 168 RK---------KTVSPADDILRLSQMNTDLFGGVDAV----VKYVLEGHDRGVNWAAFHP 214
K + V P D ++ + D V V K L H+ V ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 215 TL--------------------PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P ++SG+ D+ +K+W ++ + TL GH N V V
Sbjct: 287 ESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMC--LMTLVGHDNWVRGV 344
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDFKNKRCMKTL-NAHEHF 382
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 15/272 (5%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF H+ + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHTGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSTISEA--------TGSETKKSGKPGPFLLSGSRDKT 319
Query: 187 -DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
++ + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRC--MKTLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+ L GH + V FH + +VSAS+D TI++W++++ L GH V SF
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHT 161
Query: 147 EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
L+ S S D T+++WD F G + + + GHD
Sbjct: 162 GKLLASCSADMTIKLWD-------------------------FQGFECI--RTMHGHDHN 194
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V+ A P IVS + D+ +K+W + + V T GH V V + +I S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 267 SEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFA 326
S D+++RVW V + R ++ PE + +G K + P F
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGP-FL 311
Query: 327 VSGDSLFYAKDRFLRYYEFST 347
+SG ++D+ ++ ++ ST
Sbjct: 312 LSG-----SRDKTIKMWDIST 327
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
KY L GH V FHP ++VS ++D +K+W ET +E TL+GH ++V + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
++ S S D +I++WD G + R H
Sbjct: 159 DHTGKLLASCSADMTIKLWDF---QGFECIRTMH 189
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV V FH + VS +D IKVW+Y+ TL GH D ++ + F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
S S D TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 168 RK---------KTVSPADDILRLSQMNTDLFGGVDAV----VKYVLEGHDRGVNWAAFHP 214
K + V P D ++ + D V V K L H+ V ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 215 TL--------------------PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P ++SG+ D+ +K+W ++ + TL GH N V V
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-NAHEHF 382
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 15/272 (5%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 -DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
++ + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
H + V+ + FH +V+ D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGFVDQTVKVWEC 409
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+ L GH + V FH + +VSAS+D TI++W++++ L GH V SF
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
L+ S S D T+++WD F G + + + GHD
Sbjct: 162 GKLLASCSADMTIKLWD-------------------------FQGFECI--RTMHGHDHN 194
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V+ A P IVS + D+ +K+W + + V T GH V V + +I S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 267 SEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFA 326
S D+++RVW V + R ++ PE + + +G K + P F
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP-FL 311
Query: 327 VSGDSLFYAKDRFLRYYEFST 347
+SG ++D+ ++ ++ ST
Sbjct: 312 LSG-----SRDKTIKMWDVST 327
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
KY L GH V FHP ++VS ++D +K+W ET +E TL+GH ++V + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
++ S S D +I++WD G + R H
Sbjct: 159 DHSGKLLASCSADMTIKLWDF---QGFECIRTMH 189
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 50 HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
H PV V FH + VS +D IKVW+Y+ TL GH D ++ + F H +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
S S D TI++W++Q CI + GH+H V + P D +VSAS D+T+++W++ G
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYC 226
Query: 168 RK---------KTVSPADDILRLSQMNTDLFGGVDAV----VKYVLEGHDRGVNWAAFHP 214
K + V P D ++ + D V V K L H+ V ++ P
Sbjct: 227 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 215 TL--------------------PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCV 254
P ++SG+ D+ +K+W ++ + TL GH N V V
Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGV 344
Query: 255 MFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRF 293
+FH+ I+S ++DK++RVWD + ++T H+ F
Sbjct: 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-NAHEHF 382
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 9 SNRVKGLSF-HSKRPWILASLHSGV-IQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLF 66
++ V+ +SF HS + +LAS + + I+LWD++ I HD V V +
Sbjct: 150 TDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 67 VSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
VS D IK+W + C+ T GH +++R V+ + + I S S+DQT+R+W ++
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNT 186
C + L H H V C S+ P+ +S+ + G+ KK+ P +L S+ T
Sbjct: 268 CKAELREHEHVVECISWAPESSY---SSISEAT-----GSETKKSGKPGPFLLSGSRDKT 319
Query: 187 -DLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
++ + L GHD V FH I+S ADD+ +++W + + TL
Sbjct: 320 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC--MKTLN 377
Query: 246 GHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDV 277
H + V+ + FH +V+ S D++++VW+
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 87 FTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
+ L GH + V FH + +VSAS+D TI++W++++ L GH V SF
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 147 EDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDLFGGVDAVVKYVLEGHDRG 206
L+ S S D T+++WD F G + + + GHD
Sbjct: 162 GKLLASCSADMTIKLWD-------------------------FQGFECI--RTMHGHDHN 194
Query: 207 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMFHAKQDIIVSN 266
V+ A P IVS + D+ +K+W + + V T GH V V + +I S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQ--TGYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 267 SEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNLLAAGHDSGMIVFKLERERPAFA 326
S D+++RVW V + R ++ PE + + +G K + P F
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP-FL 311
Query: 327 VSGDSLFYAKDRFLRYYEFST 347
+SG ++D+ ++ ++ ST
Sbjct: 312 LSG-----SRDKTIKMWDVST 327
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 197 KYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSCVMF 256
KY L GH V FHP ++VS ++D +K+W ET +E TL+GH ++V + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFE-RTLKGHTDSVQDISF 158
Query: 257 HAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREH 290
++ S S D +I++WD G + R H
Sbjct: 159 DHSGKLLASCSADMTIKLWDF---QGFECIRTMH 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 349,621,161
Number of Sequences: 539616
Number of extensions: 15492997
Number of successful extensions: 61324
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 639
Number of HSP's that attempted gapping in prelim test: 41770
Number of HSP's gapped (non-prelim): 9860
length of query: 916
length of database: 191,569,459
effective HSP length: 127
effective length of query: 789
effective length of database: 123,038,227
effective search space: 97077161103
effective search space used: 97077161103
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)