Query 002497
Match_columns 915
No_of_seqs 256 out of 1083
Neff 5.5
Searched_HMMs 13730
Date Tue Mar 26 17:14:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002497.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1215-1219//hhsearch_scop/002497hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ux5a_ a.207.1.1 (A:) Bni1 {B 100.0 0 0 533.3 24.2 372 462-876 3-404 (411)
2 d1v9da_ a.207.1.1 (A:) Diaphan 100.0 0 0 499.7 30.9 311 528-875 2-312 (332)
3 d2etsa1 a.24.26.1 (A:1-110) Hy 28.1 11 0.00083 13.0 3.2 27 798-824 27-53 (110)
4 d1urua_ a.238.1.1 (A:) Amphiph 18.6 17 0.0013 11.8 8.8 35 632-668 21-55 (217)
5 d1wura1 d.96.1.1 (A:32-216) GT 16.8 19 0.0014 11.5 2.0 19 590-608 16-37 (185)
6 d1vp7a_ a.7.13.1 (A:) Exonucle 14.0 23 0.0016 11.0 5.1 47 772-824 18-64 (68)
7 d2elba1 a.238.1.1 (A:6-273) DC 11.2 27 0.002 10.5 13.5 29 626-654 19-47 (268)
8 d1g73a_ a.7.4.1 (A:) Smac/diab 10.2 29 0.0021 10.3 10.5 72 762-833 84-155 (157)
9 d1d8ba_ a.60.8.1 (A:) HRDC dom 7.2 44 0.0032 9.1 0.7 14 659-672 13-26 (81)
10 d1fftb2 f.17.2.1 (B:27-117) Cy 7.1 29 0.0021 10.3 -1.0 50 112-161 1-51 (91)
No 1
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=533.26 Aligned_cols=372 Identities=18% Similarity=0.277 Sum_probs=322.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC------CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999888654211003336777740012466644------56999999986002788788766776445679986421381
Q 002497 462 ETPRPKLKPLHWDKVRASSDRAMVWDQFKSGSF------QLNEEMIETLFTVNNSNLNSKDNGRKQVLSVPNQENRVLDP 535 (915)
Q Consensus 462 ~~Pk~KLK~LhWdKI~~~~~k~TIW~~i~~~~~------~ld~e~lE~lF~~k~~~~~~K~~~kkqv~~~~~kevsILD~ 535 (915)
..|+.|||+|||++|+.. ++|||+.+.+..+ .+|+++||++|+++...... .++ .+..+.++|||+
T Consensus 3 PkP~~klK~l~W~ki~~~--~~tiW~~i~~~~~~~~~~~~~~~~~le~~F~~k~~~~~~---~~~---~~~~~~~~lLd~ 74 (411)
T d1ux5a_ 3 PRPHKKLKQLHWEKLDCT--DNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSLA---SKR---KEDLQKITFLSR 74 (411)
T ss_dssp CCCSSCBCCCCCCCCSSC--CSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHHH---HHH---HHTTTSBCCSCH
T ss_pred CCCCCCCCCCCCEECCCC--CCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC---CCC---CCCCCCCCCCCH
T ss_conf 989999989776159998--988200204410036788663099999986447777776---666---666662001767
Q ss_pred HHHHHHHHHHHHC-CCCHHHHHHHHHCCCCCCCCHHHHHHHH--------------HHCCCHHHHHHHHHHCC-----CC
Q ss_conf 4466799988625-9998999999823899998979999999--------------60999599999984103-----69
Q 002497 536 KKSQNIAILLRAL-NVTVDEVCEGLLEGNSDTLGAELLESLL--------------KMAPTKEEERKIKEFKD-----ES 595 (915)
Q Consensus 536 KRaqNIaI~L~kl-kls~eeI~~AIl~~D~~~L~~e~Le~Ll--------------k~~Pt~EE~~~Lke~~~-----d~ 595 (915)
||+|||+|+|++| +++.++|++||++||.++|+.+.+..++ +++|+.+|+..+++|.+ .+
T Consensus 75 kr~qni~I~L~~~~~~s~~~i~~ai~~~d~~~l~~~~l~~ll~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d 154 (411)
T d1ux5a_ 75 DISQQFGINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKD 154 (411)
T ss_dssp HHHHHHHHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSC
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 89999989998706999999999998368542487899999830210134799999817993789999999851445478
Q ss_pred CCCCCHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999993889999983--822589799999999975999999999899999999999831669999999997144234579
Q 002497 596 PFKLGPAEKFLRAVL--EIPFAFKRVDAMLYIANFDSEVEYLKRSFETLQVACGELRKSRMFLKLLEAVLKTGNRMNVGT 673 (915)
Q Consensus 596 pskL~~aEqFL~~L~--~IP~~~~RL~allf~~~Fe~~v~~L~~~l~tl~~AceeLr~S~~L~~lLelILaiGN~LN~Gt 673 (915)
.+.|+.+|||+++|+ .||++..||+||+|+.+|++.+++|...+..+..||++|++|+.|++||++||++|||||+|+
T Consensus 155 ~~~L~~~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~ 234 (411)
T d1ux5a_ 155 PNDLQRADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTS 234 (411)
T ss_dssp STTBCHHHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGG
T ss_pred HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 45438799999999862334499999999999999999999999999999999999957679999999999860625899
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCHHH
Q ss_conf 98732345124411212233699980089999999999723777899999853112268750048998712013300013
Q 002497 674 NRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRAEGSRLSGANPDTKTEKTQRSSFQDDVEFRKLGLQVVSSLSG 753 (915)
Q Consensus 674 ~rG~A~GFkLsSL~KL~dvKs~D~k~TLLhyVVe~Iir~e~~~l~~~~~~~~~~~~~~~~f~ed~e~~klgl~~V~~ls~ 753 (915)
|+|+||+|++|.||.|+|++|+++|||||||+.+.+. +++ +..|.+
T Consensus 235 --~~A~GFkL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~---------------------~p~-----------l~~~~~ 280 (411)
T d1ux5a_ 235 --KQAQGFKLSTLQRLTFIKDTTNSMTFLNYVEKIVRLN---------------------YPS-----------FNDFLS 280 (411)
T ss_dssp --GCCSCCCGGGGGGSSSCBCTTSCSBHHHHHHHHHHHH---------------------CGG-----------GGGHHH
T ss_pred --CCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH---------------------CCH-----------HHCCHH
T ss_conf --8712352389887652117999801899999999986---------------------907-----------533287
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34667974148989999999999999999999999877765--4211135568899999999999999999999999999
Q 002497 754 ELTNVRKAAAMDSDVLSSEVAKLAAGITKIMEVVKLNEEIA--MKESSRKFSHSMNEFLKKAEQEIISIQSQESVALSMV 831 (915)
Q Consensus 754 EL~~V~kAAkid~e~L~sdv~kL~~~l~ki~~~l~~~~~~~--~~e~~d~F~~~M~~Fl~~Ae~ei~~Lq~~~~~~~~~~ 831 (915)
||..|..|+++++++|.+++.+|++++.+++.+++...... .....++|..+|..|+..|+.++..++..++++.+.|
T Consensus 281 el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~~~~~~~~~~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~ 360 (411)
T d1ux5a_ 281 ELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEF 360 (411)
T ss_dssp HTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78889988618999999999999999999999998620254000251116999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999965069987664681116799999999999999999986431
Q 002497 832 KEITEYFHGNSAKEEAHPFRIFLVVKEFLSTLDQVCKEVGRINER 876 (915)
Q Consensus 832 k~l~~YFGEdp~k~ea~p~~fF~~l~dFl~~ldka~kEv~k~~er 876 (915)
++++.|||||+... ..+.+||++|.+|+..|++|++|+.+..++
T Consensus 361 ~~~~~yfGEd~~~~-~~~~~fF~~~~~F~~~~~~a~~en~~~~e~ 404 (411)
T d1ux5a_ 361 ESLMHTYGEDSGDK-FAKISFFKKFADFINEYKKAQAQNLAAEEE 404 (411)
T ss_dssp HHHHHHTTCCSSCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999838998887-899999999999999999999999999999
No 2
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=0 Score=499.70 Aligned_cols=311 Identities=30% Similarity=0.432 Sum_probs=289.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 86421381446679998862599989999998238999989799999996099959999998410369999993889999
Q 002497 528 QENRVLDPKKSQNIAILLRALNVTVDEVCEGLLEGNSDTLGAELLESLLKMAPTKEEERKIKEFKDESPFKLGPAEKFLR 607 (915)
Q Consensus 528 kevsILD~KRaqNIaI~L~klkls~eeI~~AIl~~D~~~L~~e~Le~Llk~~Pt~EE~~~Lke~~~d~pskL~~aEqFL~ 607 (915)
++++|||+||+|||+|+|++|+++.++|++||++||...|+.|.|+.|++++||+||+..|++|.++. +.|+.+|||++
T Consensus 2 k~i~vLd~kr~~ni~I~L~~~k~~~~~i~~ai~~~D~~~l~~e~l~~L~~~~Pt~eE~~~l~~~~~~~-~~L~~~E~f~~ 80 (332)
T d1v9da_ 2 KELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEY-DDLAESEQFGV 80 (332)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHSCCHHHHHHHHTCGGGG-GGSCHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCH-HHCCHHHHHHH
T ss_conf 53685667889889999800796999999999957712299999999988595999999998712795-42685999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 98382258979999999997599999999989999999999983166999999999714423457998732345124411
Q 002497 608 AVLEIPFAFKRVDAMLYIANFDSEVEYLKRSFETLQVACGELRKSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLL 687 (915)
Q Consensus 608 ~L~~IP~~~~RL~allf~~~Fe~~v~~L~~~l~tl~~AceeLr~S~~L~~lLelILaiGN~LN~Gt~rG~A~GFkLsSL~ 687 (915)
+|+.||++..||+||+|+.+|++.++++...+.++..||++|++|..|+.||++||++|||||+|+.||+|+||+|++|.
T Consensus 81 ~l~~ip~~~~Rl~~~~~~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~~L~~iL~~GN~mN~g~~~g~A~GFkL~sL~ 160 (332)
T d1v9da_ 81 VMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLC 160 (332)
T ss_dssp HHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------CCHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHH
T ss_conf 98662448999999999998899999999999999999999982825999999999860063243455655552789998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCHHHHHHHHHHHHCCCHH
Q ss_conf 21223369998008999999999972377789999985311226875004899871201330001334667974148989
Q 002497 688 KLVDVKGADGKTTLLHFVVQEIIRAEGSRLSGANPDTKTEKTQRSSFQDDVEFRKLGLQVVSSLSGELTNVRKAAAMDSD 767 (915)
Q Consensus 688 KL~dvKs~D~k~TLLhyVVe~Iir~e~~~l~~~~~~~~~~~~~~~~f~ed~e~~klgl~~V~~ls~EL~~V~kAAkid~e 767 (915)
||.|+|++|+++|||||||+.+.+. +++ +.+|.+||.+|..|++++++
T Consensus 161 kL~d~Ks~d~~~tLL~~iv~~~~~~---------------------~p~-----------l~~~~~eL~~v~~ask~~~~ 208 (332)
T d1v9da_ 161 KLRDTKSADQKMTLLHFLAELCEND---------------------HPE-----------VLKFPDELAHVEKASRVSAE 208 (332)
T ss_dssp HHHHSBCSSTTSBHHHHHHHHHHHS---------------------CCT-----------TSSGGGGCTTHHHHHHCCHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHH---------------------CCH-----------HCCCHHHHHHHHHHHCCCHH
T ss_conf 6731327898731799999999984---------------------813-----------13655666508888608899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999999999999999999987776542111355688999999999999999999999999999999650699876646
Q 002497 768 VLSSEVAKLAAGITKIMEVVKLNEEIAMKESSRKFSHSMNEFLKKAEQEIISIQSQESVALSMVKEITEYFHGNSAKEEA 847 (915)
Q Consensus 768 ~L~sdv~kL~~~l~ki~~~l~~~~~~~~~e~~d~F~~~M~~Fl~~Ae~ei~~Lq~~~~~~~~~~k~l~~YFGEdp~k~ea 847 (915)
+|.+++.+|++++.+++..++... ...+.+++|..+|..|+..|+.++..++..+.++.+.|++++.|||||+++.
T Consensus 209 ~l~~~~~~l~~~l~~~~~~l~~~~--~~~~~~d~f~~~~~~Fl~~a~~~l~~l~~~~~~~~~~~~~~~~yfgEd~~~~-- 284 (332)
T d1v9da_ 209 NLQKSLDQMKKQIADVERDVQNFP--AATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKL-- 284 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC--CCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--
T ss_conf 999999999999999999998460--3444005479999999999999999999999999999999999948797879--
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8111679999999999999999998643
Q 002497 848 HPFRIFLVVKEFLSTLDQVCKEVGRINE 875 (915)
Q Consensus 848 ~p~~fF~~l~dFl~~ldka~kEv~k~~e 875 (915)
.+.+||++|.+|+..|+++++|+.+..+
T Consensus 285 ~~~efF~~~~~F~~~~~~a~~e~~~~~~ 312 (332)
T d1v9da_ 285 SVEEFFMDLHNFRNMFLQAVKENQKRRE 312 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999
No 3
>d2etsa1 a.24.26.1 (A:1-110) Hypothetical protein MW1337 {Staphylococcus aureus [TaxId: 1280]}
Probab=28.12 E-value=11 Score=12.99 Aligned_cols=27 Identities=7% Similarity=0.269 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 113556889999999999999999999
Q 002497 798 SSRKFSHSMNEFLKKAEQEIISIQSQE 824 (915)
Q Consensus 798 ~~d~F~~~M~~Fl~~Ae~ei~~Lq~~~ 824 (915)
.+-.|...|+.|.+.+.+.++.+....
T Consensus 27 ~~~DF~~~VKPf~d~vd~~l~~w~~~a 53 (110)
T d2etsa1 27 QDHDFYQTVKPYTEHIDSILNEIKLHR 53 (110)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999823530033788999999999999
No 4
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=18.59 E-value=17 Score=11.78 Aligned_cols=35 Identities=11% Similarity=-0.042 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
Q ss_conf 9999998999999999998316699999999971442
Q 002497 632 VEYLKRSFETLQVACGELRKSRMFLKLLEAVLKTGNR 668 (915)
Q Consensus 632 v~~L~~~l~tl~~AceeLr~S~~L~~lLelILaiGN~ 668 (915)
++.+...+..|..+|+.+.+ .++.++..-..+|+.
T Consensus 21 ~~~~e~~l~~l~k~~~~~~~--~~~~~~~~~~~~~~~ 55 (217)
T d1urua_ 21 FNRQQASANRLQKEFNNYIR--CVRAAQAASKTLMDS 55 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_conf 99999999999999999999--999999999999999
No 5
>d1wura1 d.96.1.1 (A:32-216) GTP cyclohydrolase I {Thermus thermophilus [TaxId: 274]}
Probab=16.84 E-value=19 Score=11.52 Aligned_cols=19 Identities=26% Similarity=0.398 Sum_probs=8.3
Q ss_pred HHCCCCCCC---CCHHHHHHHH
Q ss_conf 410369999---9938899999
Q 002497 590 EFKDESPFK---LGPAEKFLRA 608 (915)
Q Consensus 590 e~~~d~psk---L~~aEqFL~~ 608 (915)
+..|++|.. ...++|+...
T Consensus 16 ~~lGeDp~RegL~~TP~RVAka 37 (185)
T d1wura1 16 QVIGEDPGREGLLKTPERVAKA 37 (185)
T ss_dssp HHTTCCTTSGGGTTHHHHHHHH
T ss_pred HHHCCCCCCHHHHHCHHHHHHH
T ss_conf 9967999812111368999999
No 6
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=14.00 E-value=23 Score=11.04 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999877765421113556889999999999999999999
Q 002497 772 EVAKLAAGITKIMEVVKLNEEIAMKESSRKFSHSMNEFLKKAEQEIISIQSQE 824 (915)
Q Consensus 772 dv~kL~~~l~ki~~~l~~~~~~~~~e~~d~F~~~M~~Fl~~Ae~ei~~Lq~~~ 824 (915)
-|.+|+.|=-.+++.+...+ ...........++++|+.+|..|....
T Consensus 18 IV~~LE~g~l~Leesl~~ye------~G~~L~~~C~~~L~~ae~ki~~l~~~~ 64 (68)
T d1vp7a_ 18 LVSAMENGTLPLEQSLSAYR------RGVELARVCQDRLAQAEQQVKVLEGDL 64 (68)
T ss_dssp HHHHHHTTCSCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99998679998999999999------999999999999999999999997256
No 7
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.22 E-value=27 Score=10.50 Aligned_cols=29 Identities=10% Similarity=0.182 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 97599999999989999999999983166
Q 002497 626 ANFDSEVEYLKRSFETLQVACGELRKSRM 654 (915)
Q Consensus 626 ~~Fe~~v~~L~~~l~tl~~AceeLr~S~~ 654 (915)
..|+.+++.++.++..+..+|+.+.++..
T Consensus 19 ~~~E~~~~~l~~~l~kl~k~~~~~~~~~~ 47 (268)
T d2elba1 19 GVFEEDATAISNYMNQLYQAMHRIYDAQN 47 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999
No 8
>d1g73a_ a.7.4.1 (A:) Smac/diablo {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.22 E-value=29 Score=10.27 Aligned_cols=72 Identities=13% Similarity=0.133 Sum_probs=47.8
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 148989999999999999999999999877765421113556889999999999999999999999999999
Q 002497 762 AAMDSDVLSSEVAKLAAGITKIMEVVKLNEEIAMKESSRKFSHSMNEFLKKAEQEIISIQSQESVALSMVKE 833 (915)
Q Consensus 762 Akid~e~L~sdv~kL~~~l~ki~~~l~~~~~~~~~e~~d~F~~~M~~Fl~~Ae~ei~~Lq~~~~~~~~~~k~ 833 (915)
+++++.+...++.+|+..+..+...++...+.+-..+.+...-....-++-|+.+|+.+.....++++...+
T Consensus 84 ~R~ev~~~~~e~~~lEs~w~sa~~l~e~aAEAAy~sGAeqAsvta~~~lQ~aqsqV~~~r~~s~~ae~~Lae 155 (157)
T d1g73a_ 84 ARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQLVKLQVEEVHQLSRKAETKLAE 155 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999888899999999999999999999999999871578999999999999999999999998999998760
No 9
>d1d8ba_ a.60.8.1 (A:) HRDC domain from RecQ helicase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.16 E-value=44 Score=9.10 Aligned_cols=14 Identities=43% Similarity=0.394 Sum_probs=10.2
Q ss_pred HHHHHHHCCCCCCC
Q ss_conf 99999714423457
Q 002497 659 LEAVLKTGNRMNVG 672 (915)
Q Consensus 659 LelILaiGN~LN~G 672 (915)
-++++.+||+||-.
T Consensus 13 r~~~~~~gnRm~pp 26 (81)
T d1d8ba_ 13 RELSLNLGNRMVPP 26 (81)
T ss_dssp HHHHHHHHHSSSSC
T ss_pred HHHHHHHHCCCCCC
T ss_conf 99998661356874
No 10
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=7.13 E-value=29 Score=10.30 Aligned_cols=50 Identities=24% Similarity=0.313 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCC
Q ss_conf 211258999999850478999999999999999999999987-41588999
Q 002497 112 SSLLFPHPPSKSAHRHVIILAISLSFLSAAVLIAAAAVFIYF-RSKHRSSP 161 (915)
Q Consensus 112 s~l~~p~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~r-r~~~~~~~ 161 (915)
|++.-|.++-...-..|....+.+.+.-..++..+...++|| |+|+.+..
T Consensus 1 ~s~ldP~gp~a~~i~~L~~~~~~i~~iv~v~V~~~~~~~~~ryR~~~~~~~ 51 (91)
T d1fftb2 1 SALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAK 51 (91)
T ss_dssp CCCSSCCSCCHHHHHHHHHHHHHHTTTTTTHHHHHHHTTTTTTTTSTTTCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
T ss_conf 977599997899999999999999999999999999764036651687667
Done!