BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002500
(915 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2
Length = 1761
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 222/480 (46%), Gaps = 96/480 (20%)
Query: 434 KNVEEMVSGCKVCDSETLLNTGSYDHS-LCQYAHREDRDGNFLYCPSSHDIRSEGIGNFR 492
K V+EMV G V D T HS LC DG L + + I FR
Sbjct: 1364 KEVKEMVMGLNVLDPHT-------SHSWLC--------DGRLLCLHDPSNKNNWKI--FR 1406
Query: 493 KHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV-D 551
+ W +G+PV+V V +W P E ++ D++ V ++C + + + D
Sbjct: 1407 ECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCRNCAIISD 1456
Query: 552 IELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIH 608
+++ +F G+ R+R EDG P +LKLKDWP + + + + LPL EY
Sbjct: 1457 VKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK 1516
Query: 609 SRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGE 668
R G LN+A++LP Y ++ D+GPK+Y +YG DR NLH ++ D V ++V++G
Sbjct: 1517 -RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG- 1574
Query: 669 VKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDE 728
+P E G HD E V K+
Sbjct: 1575 --IPIGE----------------------------------GAHD---EEVLKT------ 1589
Query: 729 IMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDF 788
++ G A+E V +R++ D EK PGA W ++ +D K+ E LR+
Sbjct: 1590 ------IDEGDADE--VTKQRIH---DGKEK--PGALWHIYAAKDAEKIRELLRK----V 1632
Query: 789 GRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVR 848
G G N P++ + YL+ +++L EE+GV+ W+ Q LG+AVFIPAG P QV
Sbjct: 1633 GEEQGQENPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVH 1692
Query: 849 NLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQ 908
NL S +++ DF+ PE V RL +E R L N H L+V I +A A+ ++
Sbjct: 1693 NLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1752
>sp|Q6ZPY7|KDM3B_MOUSE Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2
Length = 1562
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 221/480 (46%), Gaps = 96/480 (20%)
Query: 434 KNVEEMVSGCKVCDSETLLNTGSYDHS-LCQYAHREDRDGNFLYCPSSHDIRSEGIGNFR 492
K V+EM G V D T HS LC DG L + + I FR
Sbjct: 1165 KEVKEMAMGLNVLDPHT-------SHSWLC--------DGRLLCLHDPSNKNNWKI--FR 1207
Query: 493 KHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV-D 551
+ W +G+PV+V V +W P E ++ D++ V ++C + + + D
Sbjct: 1208 ECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCRNCAIISD 1257
Query: 552 IELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIH 608
+++ +F G+ R+R EDG P +LKLKDWP + + + + LPL EY
Sbjct: 1258 VKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYT- 1316
Query: 609 SRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGE 668
R G LN+A++LP Y ++ D+GPK+Y +YG DR NLH ++ D V ++V++G
Sbjct: 1317 KRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG- 1375
Query: 669 VKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDE 728
+P E G HD E V K+
Sbjct: 1376 --IPVGE----------------------------------GAHD---EEVLKT------ 1390
Query: 729 IMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDF 788
++ G A+E V +R++ D EK PGA W ++ +D K+ E LR+
Sbjct: 1391 ------IDEGDADE--VTKQRIH---DGKEK--PGALWHIYAAKDAEKIRELLRK----V 1433
Query: 789 GRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVR 848
G G N P++ + YL+ +++L EE+GV+ W+ Q LG+AVFIPAG P QV
Sbjct: 1434 GEEQGQENPPDHDPIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVH 1493
Query: 849 NLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQ 908
NL S +++ DF+ PE V RL +E R L N H L+V I +A A+ ++
Sbjct: 1494 NLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLK 1553
>sp|Q6IRB8|KD3AA_XENLA Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2
SV=1
Length = 1331
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 198/408 (48%), Gaps = 79/408 (19%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 550
FR+ W +G+PVIV + ++ + +W P+ RE D++ N + D + + V
Sbjct: 975 FRECWKQGQPVIVSGIHNNLNSELWRPESF---RREFGDQEADLVN--CRTNDIITGATV 1029
Query: 551 DIELGEFIKGYSE--GRVRED-GWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 607
G+F +G+ + R++ D G +LKLKDWP + +L + ++ +PL EY
Sbjct: 1030 ----GDFWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYT 1085
Query: 608 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 667
R G LN+AA+LP Y ++ D+GPK+Y +YG DR NLH ++ D ++V++G
Sbjct: 1086 R-REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYVG 1144
Query: 668 EVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDED 727
K G HD E
Sbjct: 1145 IPK---------------------------------------GEHD-----------QEQ 1154
Query: 728 EIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTD 787
E++ + ++ G A+E T+K Y + EK PGA W +F +D K+ ++L++ +
Sbjct: 1155 EVI--RTIQDGDADELTIKR-----YIEFKEK--PGALWHIFAAKDTEKIRQFLKKVAEE 1205
Query: 788 FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQV 847
G + +D P++ + YL+ +++L +E GV+ W+ Q LG+AVFIPAG P QV
Sbjct: 1206 QGHENPPDHD----PIHDQSWYLDNTLRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQV 1261
Query: 848 RNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 892
NL S +++ DF+ PE V L +E R L + +HE KLQV V
Sbjct: 1262 HNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNV 1309
>sp|Q5ZIX8|KDM3A_CHICK Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1
Length = 1325
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 198/418 (47%), Gaps = 78/418 (18%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGI-RETADEKTKDENRIVKAIDCLDWSE 549
FR+ W +G+PV+V V + +W P+ + ++ D N I+
Sbjct: 969 FRECWKQGQPVMVSGVHHKLNADLWRPESFRKEFGQQEVDLVNCRTNEIITGA------- 1021
Query: 550 VDIELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEY 606
+G+F G+ + R+R E+G P +LKLKDWP + + + + +PL EY
Sbjct: 1022 ---TVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEY 1078
Query: 607 IHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHM 666
R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V++
Sbjct: 1079 TR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYV 1137
Query: 667 GEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDE 726
G +P + A E
Sbjct: 1138 G---IPKGQ-----------------------------------------------ADQE 1147
Query: 727 DEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWT 786
+E++ + ++ G ++E T+K +++ EK PGA W ++ +D K+ E+L++
Sbjct: 1148 EEVL--KTIQDGDSDELTIKR-----FTESREK--PGALWHIYAAKDTEKIREFLKKVAE 1198
Query: 787 DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQ 846
+ G+ + V +D P++ + YL+ +++L +E+GV+ W+ Q LG+ VFIPAG P Q
Sbjct: 1199 EQGQENPVDHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQ 1254
Query: 847 VRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAI 904
V NL S +++ DF+ PE V L +E R L + H L+V + +A A+
Sbjct: 1255 VHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAV 1312
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2
SV=1
Length = 1334
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 79/408 (19%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 550
FR+ W +G+PV+V V ++ + +W P+ RE D++ N + D + + V
Sbjct: 978 FRECWKQGQPVMVSGVHNNLNSELWRPESF---RREFGDQEADLVN--CRTNDIITGATV 1032
Query: 551 DIELGEFIKGYSE--GRVRED-GWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 607
G+F G+ + GR++ D G +LKLKDWP + +L + ++ +PL EY
Sbjct: 1033 ----GDFWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYT 1088
Query: 608 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 667
R G LN+AA+LP Y ++ D+GPK+Y +YG DR NLH ++ D ++V++G
Sbjct: 1089 R-REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG 1147
Query: 668 EVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDED 727
K G HD + E +
Sbjct: 1148 IPK---------------------------------------GEHDQDQEVL-------- 1160
Query: 728 EIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTD 787
+ ++ G A+E T+K + + EK PGA W ++ +D K+ ++L++ +
Sbjct: 1161 -----RTIQDGDADELTIKR-----FIEFKEK--PGALWHIYAAKDTEKIRQFLKKVAEE 1208
Query: 788 FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQV 847
G + +D P++ + YL+ +++L +E GV+ W+ Q LG+AVFIPAG P QV
Sbjct: 1209 EGHENPPDHD----PIHDQSWYLDNILRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQV 1264
Query: 848 RNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN---DHEAKLQVLEV 892
NL S +++ DF+ PE V L +E R L + +HE KLQV V
Sbjct: 1265 HNLYSCIKVAEDFVSPEHVKHCFCLTQEFRYLSHTHTNHEDKLQVKNV 1312
>sp|Q9Y4C1|KDM3A_HUMAN Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4
Length = 1321
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 191/417 (45%), Gaps = 77/417 (18%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRET-ADEKTKDENRIVKAIDCLDWSE 549
FR+ W +G+PV+V V + +W P+ + E D N I+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSELWKPESFRKEFGEQEVDLVNCRTNEIITGA------- 1018
Query: 550 VDIELGEFIKGYSE--GRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 607
+G+F G+ + R++ + P +LKLKDWP + + + ++ +PL EY
Sbjct: 1019 ---TVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYT 1075
Query: 608 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 667
R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V+
Sbjct: 1076 R-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY-- 1132
Query: 668 EVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDED 727
V +P + E+ E+
Sbjct: 1133 -VGIPKGQCEQ-----------------------------------------------EE 1144
Query: 728 EIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTD 787
E++ + ++ G ++E T+K + K PGA W ++ +D K+ E+L++ +
Sbjct: 1145 EVL--KTIQDGDSDELTIKRF-------IEGKEKPGALWHIYAAKDTEKIREFLKKVSEE 1195
Query: 788 FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQV 847
G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+ VFIPAG P QV
Sbjct: 1196 QGQENPADHD----PIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQV 1251
Query: 848 RNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAI 904
NL S +++ DF+ PE V L +E R L H L+V + +A A+
Sbjct: 1252 HNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAV 1308
>sp|Q63679|KDM3A_RAT Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2
SV=1
Length = 1214
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 197/425 (46%), Gaps = 82/425 (19%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRET-ADEKTKDENRIVKAIDCLDWSE 549
FR+ W +G+PV+V V + +W P+ + E D N I+
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQEVDLVNCRTNEIITGA------- 902
Query: 550 VDIELGEFIKGYSEGRVR----EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLE 605
+G+F G+ + R ++ P +LKLKDWP + + + ++ +PL E
Sbjct: 903 ---TVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPE 959
Query: 606 YIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVH 665
Y R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V+
Sbjct: 960 YTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1018
Query: 666 MGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATD 725
+G +P + E+
Sbjct: 1019 VG---IPKGQCEQ----------------------------------------------- 1028
Query: 726 EDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHW 785
E+E++ + ++ G ++E T+K + K PGA W ++ +D K+ E+L++
Sbjct: 1029 EEEVL--RTIQDGDSDELTIKRF-------IEGKEKPGALWHIYAAKDTEKIREFLKKVS 1079
Query: 786 TDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPF 845
+ G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+ VFIPAG P
Sbjct: 1080 EEQGQENPADHD----PIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPH 1135
Query: 846 QVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLP---NDHEAKLQVLEVGKISLYAASS 902
QV NL S +++ DF+ PE V L +E R L +HE KLQV V ++ A +
Sbjct: 1136 QVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQTHTNHEDKLQVKNVIYHAVKDAVA 1195
Query: 903 AIKEV 907
+K V
Sbjct: 1196 MLKAV 1200
>sp|Q6PCM1|KDM3A_MOUSE Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1
Length = 1323
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 79/419 (18%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRET-ADEKTKDENRIVKAIDCLDWSE 549
FR+ W +G+PV+V V + +W P+ + E D N I+
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQEVDLVNCRTNEIITGA------- 1018
Query: 550 VDIELGEFIKGYSE--GRVREDGW--PEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLE 605
+G+F G+ + R++ D P +LKLKDWP + + + ++ +PL E
Sbjct: 1019 ---TVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPE 1075
Query: 606 YIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVH 665
Y R G LN+A++LP+Y ++ D+GPK+Y +YG DR NLH ++ D ++V+
Sbjct: 1076 YTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY 1134
Query: 666 MGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATD 725
+G +P + E+
Sbjct: 1135 VG---IPKGQCEQ----------------------------------------------- 1144
Query: 726 EDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHW 785
E+E++ + ++ G ++E T+K + K PGA W ++ +D K+ E+L++
Sbjct: 1145 EEEVL--RTIQDGDSDELTIKRF-------IEGKEKPGALWHIYAAKDTEKIREFLKKVS 1195
Query: 786 TDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPF 845
+ G+ + +D P++ + YL+ +++L +E+GV+ W+ Q LG+ VFIPAG P
Sbjct: 1196 EEQGQDNPADHD----PIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPH 1251
Query: 846 QVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAI 904
QV NL S +++ DF+ PE V L +E R L H L+V + +A A+
Sbjct: 1252 QVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAV 1310
>sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C
OS=Homo sapiens GN=JMJD1C PE=1 SV=2
Length = 2540
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 52/268 (19%)
Query: 672 PTTEDEKIQSSSRESEVNESVGDPEKVSGEGSF------------PDL-----------S 708
P+ ED K +R ++ +S+ PE + EG F PDL +
Sbjct: 2265 PSGEDFKTMMPARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVA 2324
Query: 709 LGGHDVNNEHVEKSATDEDEIMEDQGVETGTA-----------EEKT---VKSERLNGYS 754
HD+ ++ +D I+ G+ G EE+ + +RL S
Sbjct: 2325 AKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSS 2384
Query: 755 DVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH 814
++ PGA W ++ +DV K+ E+L++ + G+ P+ + Y+N
Sbjct: 2385 EI-----PGALWHIYAGKDVDKIREFLQK----ISKEQGLEVLPEHDPIRDQSWYVNKKL 2435
Query: 815 KRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 874
+++L EE+GV + Q LG+A+ +PAG QV+N S +Q+ DF+ PE + E+ L +
Sbjct: 2436 RQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQ 2495
Query: 875 EIRCLPN--DHEAKLQVLEVGKISLYAA 900
E+R L +++ KLQV + LY A
Sbjct: 2496 ELRLLKEEINYDDKLQVKNI----LYHA 2519
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 550
F++ W +G+P +V V ++S+W + I + + ++C D
Sbjct: 2182 FKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQAD----------LLNCKDSIIS 2231
Query: 551 DIELGEFIKGYSEGRVRE---DGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 607
+ + EF G+ E R+ G +LKLKDWPS + + + + LPL EY
Sbjct: 2232 NANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYC 2291
Query: 608 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 667
+ G N+A+ LP + ++ D+GP++ +YG D NLH + D+V +LV++G
Sbjct: 2292 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG 2350
Query: 668 EVK 670
K
Sbjct: 2351 IAK 2353
>sp|Q69ZK6|JHD2C_MOUSE Probable JmjC domain-containing histone demethylation protein 2C
OS=Mus musculus GN=Jmjd1c PE=1 SV=3
Length = 2350
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 706 DLSLGGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKT--VKSERLNGYSDVSEKTHPG 763
+L + DV N V + ++ G+ EE+ V +RL S++ PG
Sbjct: 2144 NLHIEASDVVNVLVYVGIAKGNGVLSKAGILKKFEEEELDDVLRKRLKDSSEI-----PG 2198
Query: 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 823
A W ++ +DV K+ E+L++ + G+ P+ + Y+N +++L EE+G
Sbjct: 2199 ALWHIYAGKDVDKIREFLQK----ISKEQGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYG 2254
Query: 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN-- 881
V + Q LG+A+ +PAG QV+N S VQ+ DF+ PE + ++ L +E+R L
Sbjct: 2255 VRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLLKEEI 2314
Query: 882 DHEAKLQVLEV 892
+++ KLQV +
Sbjct: 2315 NYDDKLQVKNI 2325
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 491 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 550
F++ W +G+P +V V ++S+W + I + + ++C D
Sbjct: 1992 FKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQAD----------LLNCKDSIVS 2041
Query: 551 DIELGEFIKGYSEGRVRED---GWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 607
+ + EF G+ E R+ G +LKLKD PS + + +F+ LPL EY
Sbjct: 2042 NANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYC 2101
Query: 608 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 667
+ G N+A+ LP + ++ D+GP++ +YG D NLH D+V +LV++G
Sbjct: 2102 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVG 2160
Query: 668 EVK 670
K
Sbjct: 2161 IAK 2163
>sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus GN=Hr PE=2 SV=2
Length = 1182
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 766 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 825
W VFR QD ++ +L+ P G P YL+ +R+L+EE+GV
Sbjct: 1047 WHVFRAQDAQRIRRFLQ-----MVCPAGAGT---LEPGAPGSCYLDAGLRRRLREEWGVS 1098
Query: 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEA 885
W+ Q GEAV +PAG P QV+ L ST+ + FL PE+ + +L + LP DH
Sbjct: 1099 CWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDH-- 1156
Query: 886 KLQVLEVGKISLYAASSAIKEVQK 909
++ ++ + A +A+ +Q+
Sbjct: 1157 RMLYAQMDRAVFQAVKAAVGALQE 1180
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 42/198 (21%)
Query: 487 GIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLD 546
G F++HW +G+PV+V + + +S+W E V+ + L
Sbjct: 851 GFHLFQEHWRQGQPVLVSGIQKTLRLSLW------------GMEALGTLGGQVQTLTALG 898
Query: 547 WSE-VDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKP---------- 595
+ +++ F +G+S R KL + LL H+
Sbjct: 899 PPQPTNLDSTAFWEGFSHPETRP-------KLDE-------GSVLLLHRTLGDKDASRVQ 944
Query: 596 EFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHF 654
S LPL EY + G LN+A+ LP + + P+++ +YG RG+ KNL
Sbjct: 945 NLASSLPLPEYC-AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCV 1001
Query: 655 NMPDMVYLLVHMGEVKLP 672
+ D++ +LVH E +LP
Sbjct: 1002 EVSDLISILVH-AEAQLP 1018
>sp|P97609|HAIR_RAT Protein hairless OS=Rattus norvegicus GN=Hr PE=2 SV=2
Length = 1181
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 766 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 825
W VFR QD ++ +L+ P G P YL+ +R+L+EE+GV
Sbjct: 1046 WHVFRAQDAQRIRRFLQ-----MVCPAGAGT---LEPGAPGSCYLDSGLRRRLREEWGVS 1097
Query: 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEA 885
W+ Q GEAV +PAG P QV+ L ST+ + FL PE+ + +L + LP DH
Sbjct: 1098 CWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDH-- 1155
Query: 886 KLQVLEVGKISLYAASSAIKEVQK 909
++ ++ + A A+ +Q+
Sbjct: 1156 RMLYAQMDRAVFQAVKVAVGTLQE 1179
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 42/198 (21%)
Query: 487 GIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLD 546
G F++HW +G+PV+V + + +S+W E V+ + L
Sbjct: 850 GFRLFQEHWRQGQPVLVSGIQKTLRLSLW------------GMEALGTLGGQVQTLTALG 897
Query: 547 WSE-VDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKP---------- 595
+ ++ F KG+S R KL + LL H+P
Sbjct: 898 PPQPTSLDSTAFWKGFSHPEARP-------KLDE-------GSVLLLHRPLGDKDESRVE 943
Query: 596 EFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGN-SVKNLHF 654
S LPL EY + G LN+A+ LP + + P+++ +YG RG+ KNL
Sbjct: 944 NLASSLPLPEYC-AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCV 1000
Query: 655 NMPDMVYLLVHMGEVKLP 672
+ D++ +LVH E +LP
Sbjct: 1001 EVSDLISILVH-AEAQLP 1017
>sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5
Length = 1189
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 766 WDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVE 825
W VFR QD ++ +L+ P G P YL+ +R+L+EE+GV
Sbjct: 1054 WHVFRAQDAQRIRRFLQ-----MVCPAGAG---ALEPGAPGSCYLDAGLRRRLREEWGVS 1105
Query: 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPND 882
W+ Q GEAV +PAG P QV+ L STV + FL PE+ + +L + LP D
Sbjct: 1106 CWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSLPPD 1162
>sp|Q8L8A6|GRF5_ARATH Growth-regulating factor 5 OS=Arabidopsis thaliana GN=GRF5 PE=1
SV=1
Length = 397
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRAANS 58
P+ RC+R+DGK+WRC+ + PD CEKH + + RA S
Sbjct: 82 PEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKS 122
>sp|Q6AWY4|GRF5_ORYSJ Growth-regulating factor 5 OS=Oryza sativa subsp. japonica GN=GRF5
PE=2 SV=1
Length = 348
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRAANSALRASLKKAKRKSLGESDI 77
P+ RC+R+DGK+WRC+ + PD CE+H + + R+ + A + S++
Sbjct: 98 PEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVESKTAAPAPQSQPQLSNV 157
Query: 78 YLESKSDDYDMPLVNM 93
+ + D D PL ++
Sbjct: 158 --TTATHDTDAPLPSL 171
>sp|A2XA73|GRF1_ORYSI Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1
PE=2 SV=1
Length = 396
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ + PD CEKH + K R+
Sbjct: 91 PEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRS 128
>sp|Q6AWY8|GRF1_ORYSJ Growth-regulating factor 1 OS=Oryza sativa subsp. japonica GN=GRF1
PE=3 SV=1
Length = 397
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ + PD CEKH + K R+
Sbjct: 91 PEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRS 128
>sp|O81001|GRF1_ARATH Growth-regulating factor 1 OS=Arabidopsis thaliana GN=GRF1 PE=1
SV=1
Length = 530
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ ++PD+ CE+H + + R+
Sbjct: 197 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRS 234
>sp|Q8L8A8|GRF2_ARATH Growth-regulating factor 2 OS=Arabidopsis thaliana GN=GRF2 PE=1
SV=1
Length = 535
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ ++PD+ CE+H + + R+
Sbjct: 228 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRS 265
>sp|Q6ZIK5|GRF4_ORYSJ Growth-regulating factor 4 OS=Oryza sativa subsp. japonica GN=GRF4
PE=2 SV=1
Length = 394
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ + PD CE+H + + R+
Sbjct: 126 PEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRS 163
>sp|Q6AWY6|GRF3_ORYSJ Growth-regulating factor 3 OS=Oryza sativa subsp. japonica GN=GRF3
PE=3 SV=2
Length = 387
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ + PD CE+H + + R+
Sbjct: 115 PEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRS 152
>sp|Q9ZQ12|GRF6_ARATH Growth-regulating factor 6 OS=Arabidopsis thaliana GN=GRF6 PE=2
SV=2
Length = 244
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 22 RCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRAAN 57
RC+R+DGK+WRC+ + PD CE+H + K R+++
Sbjct: 85 RCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSS 120
>sp|Q9SU44|GRF8_ARATH Growth-regulating factor 8 OS=Arabidopsis thaliana GN=GRF8 PE=2
SV=1
Length = 493
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 22 RCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
RCKR+DGK+WRC+ +PD+ CE+H +++ R+
Sbjct: 248 RCKRTDGKKWRCSRNVIPDQKYCERHTHKSRPRS 281
>sp|Q9FRG8|GRF9_ORYSJ Growth-regulating factor 9 OS=Oryza sativa subsp. japonica GN=GRF9
PE=2 SV=1
Length = 426
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRAANSALRASLKKAKRKSLGES 75
P+ RC+R+DGK+WRC+ +M D CE+H + + R+ R ++ RK++ E+
Sbjct: 152 PEPGRCRRTDGKKWRCSKEAMADHKYCERHINRNRHRS-----RKPVENQSRKTVKET 204
>sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens
GN=CDCA7L PE=1 SV=2
Length = 454
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 193 GQICHQCRRNDRERVVWCVK---CDKRG-YCDSCISTWYSD---IPLEELEKVCPACRGS 245
G CHQCR+ + C C RG +C C+ Y + L + + VCP CRG
Sbjct: 350 GNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGI 409
Query: 246 CNCKACLRAD 255
CNC C + D
Sbjct: 410 CNCSYCRKRD 419
>sp|Q6AWY3|GRF6_ORYSJ Growth-regulating factor 6 OS=Oryza sativa subsp. japonica GN=GRF6
PE=2 SV=2
Length = 603
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ ++ D+ CE+H + + R+
Sbjct: 224 PEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRS 261
>sp|Q6AWY7|GRF2_ORYSJ Growth-regulating factor 2 OS=Oryza sativa subsp. japonica GN=GRF2
PE=3 SV=1
Length = 301
Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ + + CEKH + K R+
Sbjct: 88 PEPGRCRRTDGKKWRCSREAYGESKYCEKHMHRGKNRS 125
>sp|Q6AWX7|GRF12_ORYSJ Growth-regulating factor 12 OS=Oryza sativa subsp. japonica
GN=GRF12 PE=2 SV=1
Length = 236
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ +P CE+H + + R+
Sbjct: 141 PEPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRS 178
>sp|Q6EPP9|GRF10_ORYSJ Growth-regulating factor 10 OS=Oryza sativa subsp. japonica
GN=GRF10 PE=2 SV=1
Length = 211
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
PD RC+R+DGK+WRC+ +P CE+H + + R+
Sbjct: 136 PDPGRCRRTDGKKWRCSRDVVPGHKYCERHVHRGRGRS 173
>sp|Q6AWY2|GRF7_ORYSJ Growth-regulating factor 7 OS=Oryza sativa subsp. japonica GN=GRF7
PE=2 SV=2
Length = 411
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 22 RCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA-------ANSALRASLKKAKRKSLGE 74
RC+R+DGK+WRC+ ++ D+ CE+H + + R+ ++ A +A++ + +G
Sbjct: 113 RCRRTDGKKWRCSRDAVVDQKYCERHINRGRHRSRKHVEGQSSHAAKATVPAIAQPPIGA 172
Query: 75 SDIYLE 80
S+ L
Sbjct: 173 SNGKLS 178
>sp|Q922M5|CDA7L_MOUSE Cell division cycle-associated 7-like protein OS=Mus musculus
GN=Cdca7l PE=2 SV=1
Length = 438
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 193 GQICHQCRRN--DRERVVWCVKCDK-RG-YCDSCISTWYSD---IPLEELEKVCPACRGS 245
G CHQCR+ D + V C RG +C C+ Y + L + + CP CRG
Sbjct: 338 GNTCHQCRQKTIDTKTVCRNQSCGGVRGQFCGPCLRNRYGEDVRTALLDPKWTCPPCRGI 397
Query: 246 CNCKACLRAD 255
CNC C R D
Sbjct: 398 CNCSYCRRRD 407
>sp|Q4G059|CDA7L_RAT Cell division cycle-associated 7-like protein OS=Rattus norvegicus
GN=Cdca7l PE=2 SV=1
Length = 438
Score = 41.6 bits (96), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 193 GQICHQCRRN--DRERVVWCVKCDK-RG-YCDSCISTWYSD---IPLEELEKVCPACRGS 245
G CHQCR+ D + V C RG +C C+ Y + L + + CP CRG
Sbjct: 338 GNTCHQCRQKTIDTKTVCRNQGCGGVRGQFCGPCLRNRYGEDVRTALLDPKWTCPPCRGI 397
Query: 246 CNCKACLRAD 255
CNC C R D
Sbjct: 398 CNCSYCRRRD 407
>sp|Q6AWY1|GRF8_ORYSJ Growth-regulating factor 8 OS=Oryza sativa subsp. japonica GN=GRF8
PE=2 SV=1
Length = 409
Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 22 RCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
RC+R+DGK+WRC+ ++ D+ CE+H + + R+
Sbjct: 163 RCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRS 196
>sp|Q9FJB8|GRF7_ARATH Growth-regulating factor 7 OS=Arabidopsis thaliana GN=GRF7 PE=2
SV=1
Length = 365
Score = 40.0 bits (92), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 13 DNGGIPDDL---RCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
+N I DL RC+R+DGK+WRC + + CEKH + + R+
Sbjct: 100 NNKNIAGDLEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRS 145
>sp|Q6AWX8|GRF11_ORYSJ Growth-regulating factor 11 OS=Oryza sativa subsp. japonica
GN=GRF11 PE=2 SV=1
Length = 269
Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRR 54
P+ RC+R+DGK+WRC ++ ++ CE+H + ++R
Sbjct: 181 PEPGRCRRTDGKKWRCWRNAIANEKYCERHMHRGRKR 217
>sp|Q9D0M2|CDCA7_MOUSE Cell division cycle-associated protein 7 OS=Mus musculus GN=Cdca7
PE=1 SV=1
Length = 382
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 193 GQICHQCRRNDRERVVWCVKCDKRG----YCDSCISTWYSDIPLEELEKV---CPACRGS 245
G CHQCR+ + C D G +C C+ Y + + L CP CRG
Sbjct: 278 GSTCHQCRQKTTDTKTNCRNPDCWGIRGQFCGPCLRNRYGEEVKDALLDPNWHCPPCRGI 337
Query: 246 CNCKACLRADNMIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQ 292
CNC C + D + + L K H + + A L +KQ ++Q
Sbjct: 338 CNCSFCRQRDGRCATGV--LVYLAKY-HGFGNVHAYLKSLKQEFEMQ 381
>sp|Q4KM91|CDCA7_RAT Cell division cycle-associated protein 7 OS=Rattus norvegicus
GN=Cdca7 PE=2 SV=1
Length = 377
Score = 38.5 bits (88), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 193 GQICHQCRRNDRERVVWCVKCDKRG----YCDSCISTWYSDIPLEELEKV---CPACRGS 245
G CHQCR+ + C D G +C C+ Y + + L CP CRG
Sbjct: 273 GSTCHQCRQKTTDTKTNCRNPDCWGIRGQFCGPCLRNRYGEEVKDALLDPNWHCPPCRGI 332
Query: 246 CNCKACLRADNMIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQ 292
CNC C + D + + L K H + + A L +KQ ++Q
Sbjct: 333 CNCSFCRQRDGRCATGV--LVYLAKY-HGFGNVHAYLKSLKQEFEMQ 376
>sp|Q8L8A7|GRF4_ARATH Growth-regulating factor 4 OS=Arabidopsis thaliana GN=GRF4 PE=2
SV=1
Length = 380
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RCKR+DGK+WRC+ + C++H + + R+
Sbjct: 152 PEPGRCKRTDGKKWRCSRDVVAGHKYCDRHIHRGRNRS 189
>sp|Q9SJR5|GRF3_ARATH Growth-regulating factor 3 OS=Arabidopsis thaliana GN=GRF3 PE=2
SV=1
Length = 398
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 18 PDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
P+ RC+R+DGK+WRC+ CE+H + + R+
Sbjct: 145 PEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRS 182
>sp|Q32PH1|CDCA7_BOVIN Cell division cycle-associated protein 7 OS=Bos taurus GN=CDCA7
PE=2 SV=1
Length = 374
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 16/110 (14%)
Query: 193 GQICHQCRR-------NDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKV---CPAC 242
G CHQCR+ N R W V+ +C C+ Y + + L CP C
Sbjct: 270 GSTCHQCRQKTIDTKTNCRNPECWGVRGQ---FCGPCLRNRYGEEVKDALLDPNWHCPPC 326
Query: 243 RGSCNCKACLRADNMIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQ 292
RG CNC C + D + + L K H + + A L +KQ ++Q
Sbjct: 327 RGICNCSFCRQRDGRCATGV--LVYLAKY-HGFGNVHAYLKSLKQEFEMQ 373
>sp|Q9BWT1|CDCA7_HUMAN Cell division cycle-associated protein 7 OS=Homo sapiens GN=CDCA7
PE=1 SV=1
Length = 371
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 193 GQICHQCRRNDRERVVWCVKCDKRG----YCDSCISTWYSDIPLEELEKV---CPACRGS 245
G CHQCR+ + C D G +C C+ Y + + L CP CRG
Sbjct: 267 GSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGI 326
Query: 246 CNCKACLRADNMIKVRIREIPVLDKLQHLYCLLSAVLPVVKQIHQIQ 292
CNC C + D + + L K H + + A L +KQ ++Q
Sbjct: 327 CNCSFCRQRDGRCATGV--LVYLAKY-HGFGNVHAYLKSLKQEFEMQ 370
>sp|Q8S9M3|GRF9_ARATH Growth-regulating factor 9 OS=Arabidopsis thaliana GN=GRF9 PE=1
SV=1
Length = 431
Score = 38.1 bits (87), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 22 RCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKRRA 55
RC+R+DGK+WRC+ + + CE+H + ++R+
Sbjct: 94 RCRRTDGKKWRCSNTVLLFEKYCERHMHRGRKRS 127
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 22 RCKRSDGKQWRCTAMSMPDKTVCEKH 47
RC+R+DGK+WRC+ + + C+KH
Sbjct: 312 RCRRTDGKKWRCSKDVLSGQKYCDKH 337
>sp|Q9HCN4|GPN1_HUMAN GPN-loop GTPase 1 OS=Homo sapiens GN=GPN1 PE=1 SV=1
Length = 374
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 132 PLKANDDSQRDVAEYEENLRSYKTPPHSGMDSSRNRSQRSFDPSPTMEYSEGSMNSSE-- 189
P AN D RD +Y+E ++ Y P+ G+ +S N FD M++ E + N S+
Sbjct: 63 PFPANIDI-RDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFD--QVMKFIEKAQNMSKYV 119
Query: 190 --DTGGQI 195
DT GQI
Sbjct: 120 LIDTPGQI 127
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 182 EGSMNSSEDTGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCP 240
E + S E+ C C R+DRE R++ C CD GY C+ ++P++E CP
Sbjct: 172 ENTKASEEEEDPTFCEVCGRSDREDRLLLCDGCDA-GYHMECLDPPLQEVPVDEW--FCP 228
Query: 241 AC 242
C
Sbjct: 229 EC 230
>sp|Q8NFW9|MYRIP_HUMAN Rab effector MyRIP OS=Homo sapiens GN=MYRIP PE=1 SV=2
Length = 859
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 321 CCNICRIP---IIDYHRHCGNCMYDLCLSCC 348
CC C P +++ R CG+C +++C SCC
Sbjct: 63 CCMRCCSPFTFLVNTKRQCGDCKFNVCKSCC 93
>sp|A4FUD1|GPN1_BOVIN GPN-loop GTPase 1 OS=Bos taurus GN=GPN1 PE=2 SV=1
Length = 373
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 132 PLKANDDSQRDVAEYEENLRSYKTPPHSGMDSSRNRSQRSFDPSPTMEYSEGSMNSSE-- 189
P AN D RD +Y+E ++ Y P+ G+ +S N FD M++ E + N S+
Sbjct: 63 PFPANIDI-RDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFD--QVMKFIEKAQNMSKYV 119
Query: 190 --DTGGQI 195
DT GQI
Sbjct: 120 LIDTPGQI 127
>sp|Q2TBV5|TF2H2_BOVIN General transcription factor IIH subunit 2 OS=Bos taurus GN=GTF2H2
PE=2 SV=1
Length = 395
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%)
Query: 142 DVAEYEENLRSYKTPPHSGMDSSRNRSQRSF-------------DPSPTMEYSEGSMNSS 188
D + Y+E L + +PP + +S + + F PS +M + + +
Sbjct: 224 DESHYKELLTHHVSPPPASSNSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPG 283
Query: 189 EDTGGQICHQCRRNDRERVVWCVKCD---------KRGYCDSCISTWYSDIPLEEL--EK 237
GG C QCR E V C C R Y + +IPLEE E+
Sbjct: 284 LTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGER 343
Query: 238 VCPACRG 244
C AC+G
Sbjct: 344 FCYACQG 350
>sp|Q9Y2H8|ZN510_HUMAN Zinc finger protein 510 OS=Homo sapiens GN=ZNF510 PE=2 SV=1
Length = 683
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 121 TPPTRGMSARNPLKANDDSQRDV--AEYEENLRSYKTPPHSGMDSSRNRSQRSFDPSPTM 178
T P + NPL +ND +Q V +EY EN +SY+T H R RS P
Sbjct: 352 TDPQTAVIEENPLVSNDRTQTWVKSSEYHENKKSYQTSVH----RVRRRSHSMMKPYKCN 407
Query: 179 EYSEGSMNSSEDTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKV 238
E + S G I HQ R + E+ C +C K S +ST + I E
Sbjct: 408 ECGK----SFCQKGHLIQHQ-RTHTGEKPFECSECGKTFSQKSHLST-HQRIHTAEKPYK 461
Query: 239 CPACRGSCNCKACLRADNMI 258
C C + K+ LR I
Sbjct: 462 CNECGKTFVQKSTLRGHQRI 481
>sp|P36822|VE7_HPV19 Protein E7 OS=Human papillomavirus type 19 GN=E7 PE=3 SV=1
Length = 102
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 229 DIPLEELEKVCPACRGSCN 247
DI +EEL+ +CP CRG+CN
Sbjct: 80 DILIEELQLLCPECRGNCN 98
>sp|Q7TNY7|MYRIP_RAT Rab effector MyRIP OS=Rattus norvegicus GN=Myrip PE=1 SV=1
Length = 856
Score = 33.9 bits (76), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 321 CCNICRIP---IIDYHRHCGNCMYDLCLSCC 348
CC C P +++ R CG C + +C SCC
Sbjct: 63 CCMRCCSPFTFLVNARRRCGECKFSVCKSCC 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 363,223,787
Number of Sequences: 539616
Number of extensions: 16417284
Number of successful extensions: 43653
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 43503
Number of HSP's gapped (non-prelim): 151
length of query: 915
length of database: 191,569,459
effective HSP length: 127
effective length of query: 788
effective length of database: 123,038,227
effective search space: 96954122876
effective search space used: 96954122876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)