Your job contains 1 sequence.
>002502
MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ
EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE
IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK
VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF
RHMQIEEEDTLENGDLAHEGSEQNGEENAEEQNGEEGSQEEPVVVDADSTDGAVLVNGNE
AEEQWGTNNEGIPSA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002502
(915 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 4057 0. 1
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 2795 4.9e-291 1
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 2772 1.0e-290 2
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 2771 2.1e-290 2
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 2772 3.4e-290 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 2765 3.4e-290 2
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 2785 5.6e-290 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 2778 3.1e-289 1
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 2775 6.4e-289 1
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 2641 7.2e-277 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 2604 8.5e-271 1
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 2566 9.0e-267 1
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 2457 3.2e-255 1
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 2420 2.7e-251 1
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 2342 1.7e-244 2
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 2023 3.1e-209 1
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 1896 9.0e-196 1
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 1474 7.1e-180 2
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 744 1.1e-73 1
WB|WBGene00008476 - symbol:E03H4.8 species:6239 "Caenorha... 739 3.6e-73 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 411 8.8e-68 2
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 400 2.3e-66 2
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 374 5.6e-59 3
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 368 1.5e-53 2
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 417 8.6e-52 2
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 406 7.5e-49 2
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 534 4.0e-48 1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 391 1.5e-42 2
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 355 1.6e-42 2
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 355 1.6e-42 2
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 354 2.0e-42 2
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 350 2.0e-42 2
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 360 2.1e-42 2
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 350 1.1e-41 2
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 353 1.2e-41 2
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 350 4.9e-39 2
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 430 1.1e-36 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 421 1.0e-35 1
UNIPROTKB|H0Y938 - symbol:COPB2 "Coatomer subunit beta'" ... 394 1.3e-35 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 379 4.6e-31 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 364 4.3e-28 4
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 180 2.6e-26 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 306 3.8e-26 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 306 3.8e-26 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 167 1.1e-25 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 310 2.2e-24 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 284 8.6e-24 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 303 1.8e-23 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 280 2.3e-23 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 294 5.8e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 274 1.0e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 274 1.0e-22 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 274 1.0e-22 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 274 1.0e-22 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 274 1.0e-22 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 274 1.0e-22 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 273 1.3e-22 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 285 3.2e-22 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 268 4.5e-22 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 268 4.5e-22 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 282 4.5e-22 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 286 4.7e-22 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 266 7.3e-22 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 287 9.9e-22 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 279 1.1e-21 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 264 1.2e-21 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 264 1.2e-21 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 280 1.3e-21 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 286 2.2e-21 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 280 2.3e-21 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 278 4.3e-21 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 258 5.3e-21 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 257 6.7e-21 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 279 1.0e-20 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 272 1.4e-20 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 269 1.4e-20 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 272 1.8e-20 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 277 1.8e-20 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 268 2.3e-20 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 273 3.7e-20 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 273 3.9e-20 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 266 3.9e-20 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 260 4.5e-20 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 264 5.9e-20 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 252 6.9e-20 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 267 8.2e-20 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 268 1.8e-19 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 256 1.8e-19 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 260 2.1e-19 1
FB|FBgn0030011 - symbol:Gbeta5 "Gbeta5" species:7227 "Dro... 253 2.7e-19 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 258 2.9e-19 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 264 3.0e-19 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 255 3.3e-19 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 255 3.3e-19 1
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 263 3.8e-19 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 263 4.2e-19 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 262 4.5e-19 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 256 5.1e-19 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 262 5.3e-19 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 256 5.8e-19 1
WARNING: Descriptions of 1314 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 4057 (1433.2 bits), Expect = 0., P = 0.
Identities = 763/913 (83%), Positives = 820/913 (89%)
Query: 2 PLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVR 61
PLRLEIKRK AQRSERVKSVDLHP+EPWILASLYSGT+CIWNYQ+QTM KSF+VTELPVR
Sbjct: 217 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVR 276
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
SAKF+ARKQWVVAGADDMFIRVYNYNTMDK+KVFEAH DYIRCVAVHPTLPYVLSSSDDM
Sbjct: 277 SAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDM 336
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
LIKLWDWEKGW+CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL
Sbjct: 337 LIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 396
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
DAH KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV FHPEL
Sbjct: 397 DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPEL 456
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGR 301
PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIG++K SRR+VIGYDEG+IMVK+GR
Sbjct: 457 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLGR 516
Query: 302 EEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKH 361
E PVASMDNSGKIIWAKHNEI TVNIKSVGAD EVTDGERLPLAVKELGTCDLYPQSLKH
Sbjct: 517 EIPVASMDNSGKIIWAKHNEIHTVNIKSVGAD-EVTDGERLPLAVKELGTCDLYPQSLKH 575
Query: 362 NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVREXXXXXXXXXXNFQE 421
NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGE+AVRE NFQE
Sbjct: 576 NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEHAVRESSTKIKIFSKNFQE 635
Query: 422 KRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA 481
K++VRPTFSAE I+GGTLL MCS+DFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA
Sbjct: 636 KKTVRPTFSAEHIFGGTLLTMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA 695
Query: 482 SDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSS 541
SDTSFYILK+NRD+VS+Y D GK +DE+G+EDAFELL+ETNERVRTGLWVGDCFIY NSS
Sbjct: 696 SDTSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSS 755
Query: 542 WRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMR 601
WRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNV+GYTLLLSLIEYKTLVMR
Sbjct: 756 WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMR 815
Query: 602 GDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEI 661
GDLE+ANE+LPSIPKEHHNSVA FLESRGM E+A+EVATDPDYRFELAIQLGRL VA++I
Sbjct: 816 GDLEQANEVLPSIPKEHHNSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKDI 875
Query: 662 ATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAK 721
A E Q+ESKWKQLGELAMS+GKL+MAE CM+ AMD DA+G+ KLA+LAK
Sbjct: 876 AVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAK 935
Query: 722 EQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKV 781
EQGKNNVAFLCLFMLG++EDCL LLVESNRIPEAALMARSYLPSKVSEIVA+WR DL K+
Sbjct: 936 EQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTKI 995
Query: 782 NPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFR 841
+PKAAESLADPEEY NLF++WQVAL++E++AA TRGVHPPA DY +HAD+ + TLV+AFR
Sbjct: 996 SPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVHPPAGDYCSHADRDHTTLVDAFR 1055
Query: 842 HMQIEEEDTLENGDLAHXXXXXXXXXXXXXXXXXXXXXXX---------PVVVDADSTDG 892
MQIEEE LE GD+ VVVDADSTDG
Sbjct: 1056 IMQIEEEGRLEQGDVLDEVGEEGEDGEEEEEEDRQEESSDGRQQNVEEEAVVVDADSTDG 1115
Query: 893 AVLVNGNEAEEQW 905
AVLVNGNE+EEQW
Sbjct: 1116 AVLVNGNESEEQW 1128
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 2795 (988.9 bits), Expect = 4.9e-291, P = 4.9e-291
Identities = 502/827 (60%), Positives = 649/827 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHPSEPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R++KFVARK WV+ GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT PY+L+SSDD
Sbjct: 61 RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDWEK W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS V FHPE
Sbjct: 181 LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I++K+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSIIIKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+EIQ N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDTNGKIIWAKHSEIQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EFVW+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+IL+Y + V+A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVAKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL++CL+LL+++NR+PEAA +AR+YLPS+VS +V +WR+ L
Sbjct: 719 AERDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATR-GVHPPAEDY 825
KVN KAAESLADP EY NLF + A E T G PA DY
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLREAFVAEQYLKETSLGQTRPASDY 825
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 2772 (980.9 bits), Expect = 1.0e-290, Sum P(2) = 1.0e-290
Identities = 497/826 (60%), Positives = 646/826 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
Score = 44 (20.5 bits), Expect = 1.0e-290, Sum P(2) = 1.0e-290
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 766 KVSEIVAIWRKDLQK-VNPKAAESLADPEEYSNLFD---DWQVALAVESKAAATRGVHP- 820
K + +V W K+ + P L P E N+ + D+Q + + + + P
Sbjct: 802 KEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEGKDFQPSRSTAQQELDGKPASPT 861
Query: 821 P---AEDYVNHADKSYMTLVEAFRHMQIEEEDTLE 852
P A N +KS + L ++++E+ DT +
Sbjct: 862 PVIVASHTANKEEKSLLELEVDLDNLELEDIDTTD 896
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 2771 (980.5 bits), Expect = 2.1e-290, Sum P(2) = 2.1e-290
Identities = 497/826 (60%), Positives = 645/826 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+ED FE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
Score = 42 (19.8 bits), Expect = 2.1e-290, Sum P(2) = 2.1e-290
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 766 KVSEIVAIWRKDLQK-VNPKAAESLADPEEYSNLFDD---WQVALAVESKAAATRGVHP- 820
K + +V W K+ + P L P E N+ ++ +Q + + + A + P
Sbjct: 802 KEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKGFQPSRSAAQQELAGKPASPT 861
Query: 821 P---AEDYVNHADKSYMTLVEAFRHMQIEEEDTLE 852
P A N +KS + L ++++E+ DT +
Sbjct: 862 PVIMATHTGNKEEKSLLELEVDLDNLELEDIDTTD 896
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 2772 (980.9 bits), Expect = 3.4e-290, Sum P(2) = 3.4e-290
Identities = 497/826 (60%), Positives = 645/826 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+ED FE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
Score = 39 (18.8 bits), Expect = 3.4e-290, Sum P(2) = 3.4e-290
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 766 KVSEIVAIWRKDLQK-VNPKAAESLADPEEYSNLFDD---WQVALAVESKAAATRGVHP- 820
K + +V W K+ + P L P E N+ ++ +Q + + + + P
Sbjct: 802 KEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKGFQPSRSAAQQELDGKPASPT 861
Query: 821 PA---EDYVNHADKSYMTLVEAFRHMQIEEEDTLE 852
P N +KS + L +++IE+ DT +
Sbjct: 862 PVIVTSQTANKEEKSLLELEVDLDNLEIEDIDTTD 896
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 2765 (978.4 bits), Expect = 3.4e-290, Sum P(2) = 3.4e-290
Identities = 496/826 (60%), Positives = 644/826 (77%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL S+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQT EGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DTEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
Score = 46 (21.3 bits), Expect = 3.4e-290, Sum P(2) = 3.4e-290
Identities = 20/94 (21%), Positives = 39/94 (41%)
Query: 766 KVSEIVAIWRKDLQK-VNPKAAESLADPEEYSNLFDD---WQVALAVESKAAATRGVHPP 821
K + +V W K+ + P L P E N+ ++ +Q + A + + P
Sbjct: 802 KEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKRFQPSRATAQQEPDGKPASSP 861
Query: 822 ---AEDYVNHADKSYMTLVEAFRHMQIEEEDTLE 852
A + +KS+ L + M++E+ DT +
Sbjct: 862 VIMASQTTHKEEKSFQELEDDLDTMELEDIDTTD 895
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 2785 (985.4 bits), Expect = 5.6e-290, P = 5.6e-290
Identities = 499/826 (60%), Positives = 650/826 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS V FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EFVW+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + VS+ ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVSSAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A++ GKNNVAF+ F+ GKL+ CL+LL+++ R+PEAA +AR+YLPS+VS +V +WR+ L
Sbjct: 719 AEKDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRESLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE + PA +Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEYVKQSLADLRPAREY 824
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 2778 (983.0 bits), Expect = 3.1e-289, P = 3.1e-289
Identities = 498/826 (60%), Positives = 646/826 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DTEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 2775 (981.9 bits), Expect = 6.4e-289, P = 6.4e-289
Identities = 498/826 (60%), Positives = 646/826 (78%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RE NF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFK-NF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 2641 (934.7 bits), Expect = 7.2e-277, Sum P(2) = 7.2e-277
Identities = 473/797 (59%), Positives = 619/797 (77%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
+LASLY+G+VC+WN+++QT+ K+FEV +LPVR+AKFVARK WVV GADDM IRV+NYNT+
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
++V +FEAH+DYIRC+AVHPT P++L+SSDDMLIKLWDW+K W C+Q+FEGH+HYVMQ+
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
NPKD N FASASLDRTIK+W LGS PNFTL+ H+KGVNC+DY++GGDKPYLI+G+DD
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
K+WDYQ K+CVQTLEGH NVS FHPELPIIITGSEDGTVRIWH++TYRLE+TLNY
Sbjct: 181 LVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNY 240
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKS 329
G+ERVW + ++ S + +GYDEG+I+VK+GREEP SMD +GKIIWAKH+E+Q N+K+
Sbjct: 241 GMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKA 300
Query: 330 VGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSF 389
+G D E+ DGERLPLAVK++G+C++YPQ+++HNPNGRFVVVCGDGEYIIYTA+A RN+SF
Sbjct: 301 MG-DAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSF 359
Query: 390 GSALEFVWSSDG-EYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFI 448
GSA EF W+ D EYA+RE NF+EK+S +P F AE IYGG LL + S + +
Sbjct: 360 GSAQEFAWAHDSSEYAIRESNSIVKIFK-NFKEKKSFKPDFGAESIYGGFLLGVRSVNGL 418
Query: 449 CFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDE 508
FYDW LIRRI++ K+++W+DSG+LV IA++ SF+ILKY + V A ++ + V E
Sbjct: 419 AFYDWDNTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTE 478
Query: 509 QGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYL 568
G+EDAFE+L E E V+TGLWVGDCFIY +S RLNY VGGE+ T+ HLDR MYLLGY+
Sbjct: 479 DGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYI 538
Query: 569 ASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLES 628
+R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE
Sbjct: 539 PKDNRLYLGDKELNIISYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEK 598
Query: 629 RGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAE 688
+G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+
Sbjct: 599 QGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQ 658
Query: 689 GCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVE 748
C+ A D +A ++KLA A+ GKNNVAF+ F+ GK++ CL+LL+
Sbjct: 659 ECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIR 718
Query: 749 SNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAV 808
+ R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A V
Sbjct: 719 TGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVV 778
Query: 809 ESKAAATRGVHPPAEDY 825
E T PA+ Y
Sbjct: 779 EEWVKETHADLWPAKQY 795
Score = 193 (73.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 29 WILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
W++ + ++NY + FE +R + +++ +DDM I++++++
Sbjct: 42 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 101
Query: 89 MDKV-KVFEAHTDYIRCVAVHPT-LPYVLSSSDDMLIKLWDWEKGWMCTQI-FEGHSHYV 145
+VFE HT Y+ + ++P S+S D IK+W + G EGH V
Sbjct: 102 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVW--QLGSSSPNFTLEGHEKGV 159
Query: 146 MQVTF-NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLIT 204
+ + + D S + DR +KIW+ + TL+ H + V+C + + P +IT
Sbjct: 160 NCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIIT 217
Query: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTV 253
GS+D T ++W T TL V V + G ++G++
Sbjct: 218 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 266
Score = 182 (69.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 52/208 (25%), Positives = 95/208 (45%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQ-TMAKSFEVTELPVRSA 63
LE S+ ++ + +HP++P+IL S + +W++ + + ++ FE V
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 119
Query: 64 KFVARKQWVVAGAD-DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSDD 120
+ A A D I+V+ + E H + C+ + PY++S +DD
Sbjct: 120 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 179
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
L+K+WD++ C Q EGH+ V +F+P + + S D T++IW+ + T
Sbjct: 180 RLVKIWDYQNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLEST 237
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDD 208
L+ + V CV G + L G D+
Sbjct: 238 LNYGMERVWCVASLRGSNNVAL--GYDE 263
Score = 44 (20.5 bits), Expect = 7.2e-277, Sum P(2) = 7.2e-277
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 766 KVSEIVAIWRKDLQK-VNPKAAESLADPEEYSNLFD---DWQVALAVESKAAATRGVHP- 820
K + +V W K+ + P L P E N+ + D+Q + + + + P
Sbjct: 773 KEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEGKDFQPSRSTAQQELDGKPASPT 832
Query: 821 P---AEDYVNHADKSYMTLVEAFRHMQIEEEDTLE 852
P A N +KS + L ++++E+ DT +
Sbjct: 833 PVIVASHTANKEEKSLLELEVDLDNLELEDIDTTD 867
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 2604 (921.7 bits), Expect = 8.5e-271, P = 8.5e-271
Identities = 469/859 (54%), Positives = 652/859 (75%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVT-ELP 59
MPLRL+IK+KL+ RS+RVKSVD+HP+EPWILASLY G V IWNY++Q M KSFEV+ P
Sbjct: 1 MPLRLDIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNP 60
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSD 119
VR+A+F+A+KQW+V G+DD +IRVYNYNTM+K+K FEAH DYIRC+ VHPTLPY+LSSSD
Sbjct: 61 VRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSD 120
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
DM IKLWD+EKGW TQ+FEGHSHYVM + +NPKDTN FA+ASLD+T+K+W++ SP P+F
Sbjct: 121 DMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHF 180
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
TL+ H+KG+N V+YF+GG+KPYLI+G+DD K+WDYQ+K+CVQTLEGH++NVS VC+HP
Sbjct: 181 TLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHP 240
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKI 299
ELP+I++GSEDGTV++WH++TYRLE TLNYG+ VW++ +++ S I +GYD+GT+++KI
Sbjct: 241 ELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKI 300
Query: 300 GREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSL 359
G+ +P SMD GK+I+AKHNEI+ NI S + EV DGE+L L K+LG C+++PQSL
Sbjct: 301 GKNKPPVSMDQGGKVIYAKHNEIRISNISST-LEQEVQDGEKLSLQSKDLGNCEVFPQSL 359
Query: 360 KHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSD-GEYAVREXXXXXXXXXXN 418
+HN NGRFV VCGDGE+IIYTALAWRN+SFG+ALEFVW+ D G+YAVRE N
Sbjct: 360 QHNSNGRFVSVCGDGEFIIYTALAWRNKSFGNALEFVWAEDSGQYAVRESTSRIKIFK-N 418
Query: 419 FQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTV-KNLYWADSGDL 477
F+E S +P+FSAE I+GG+LL + SND +CFY W +IRRI+ T KN++W+++GD
Sbjct: 419 FKETHSFKPSFSAEGIFGGSLLGVKSNDTLCFYSWDSADIIRRIEKTSPKNIFWSENGDY 478
Query: 478 VAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIY 537
+AI +D S +IL+Y +D V Y++SG+P+ E G+E+AF+++HE + + TGLWVGDCFIY
Sbjct: 479 LAIVTDKSTFILRYYKDTVQKYIESGQPIGELGIENAFDVVHEIEDTIGTGLWVGDCFIY 538
Query: 538 NNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKT 597
N S +LNYCVG EV T+ HL++ MYLL YL R+YL DK N++ Y L +S+I Y+T
Sbjct: 539 INRSSKLNYCVGTEVVTISHLEKHMYLLKYLPQSGRLYLSDKNLNIVSYKLHISVISYQT 598
Query: 598 LVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEV 657
++RGDLE A ILP IP++ NS+A FLES+G E+A+EV+TD D+RFELAIQL L+V
Sbjct: 599 SILRGDLEGAERILPKIPQDQRNSIAHFLESQGYKEKALEVSTDLDHRFELAIQLENLDV 658
Query: 658 AQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLA 717
A EIA + SE+K+K LG+LA+S G++++AE C+K+A D D EG+ LA
Sbjct: 659 AHEIALKSDSETKFKHLGDLALSIGEIKLAENCLKKAEDLPGLLLLYTSTGDIEGMKMLA 718
Query: 718 SLAKEQGKNNVAFLCLFML-GKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRK 776
L++E+G+ N++F+C +L L +CL L S EAA MAR+YLPS V ++V W++
Sbjct: 719 KLSEEKGQTNISFICNLLLPNSLLNCLNTLCASGDYSEAAFMARTYLPSMVPDMVEKWKE 778
Query: 777 DLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTL 836
L+ + KA+++L++P ++ NLF + +++ E + R + DY+ +A + +L
Sbjct: 779 SLKSTSSKASDALSNPIDFPNLFPQYDLSIKAEKYFESLRSQPKSSFDYLKNA--TAQSL 836
Query: 837 VEAFRHMQIEEEDTLENGD 855
+ R++ +EE +++ D
Sbjct: 837 SKKQRNL-LEEIESVSQQD 854
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 2566 (908.3 bits), Expect = 9.0e-267, P = 9.0e-267
Identities = 459/824 (55%), Positives = 616/824 (74%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPL+L+IKR+L RS+RVK VDLHP+EPW+L +LY+G V I NY++Q M K FEV ++PV
Sbjct: 1 MPLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RSA+FVARK W++ G+DDM IRV+NYNT++KV FEAH+DY+RC+AVHPT P VL+SSDD
Sbjct: 61 RSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLW+WEK W C ++FEGH+HYVMQ+ FNPKD NTFASASLDRT+K+W LGS NFT
Sbjct: 121 MLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNCVDY+ GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH N+SAVCFHPE
Sbjct: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPI++TGSEDGTVRIWH+ TYRLE LNYG ERVW I M+ + + +GYDEG+I++K+G
Sbjct: 241 LPIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVG 300
Query: 301 REEPVASMDNSG-KIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSL 359
REEP SMD G KIIWAKH+E+Q VN+K++ E+ DGERLP+A K++G C++YPQ++
Sbjct: 301 REEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGTEIKDGERLPVATKDMGACEIYPQTI 360
Query: 360 KHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXN 418
HNPNGRFVVVCGDGEYIIYT++A RN++FGSA EFVW+ + EYA+RE N
Sbjct: 361 AHNPNGRFVVVCGDGEYIIYTSMALRNKAFGSAQEFVWALESNEYAIRENNGTVRLFR-N 419
Query: 419 FQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLV 478
F+E++S P + AE IYGG + ++ + FYDW +L+RRI+V KN++W +SG LV
Sbjct: 420 FKERKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEVQPKNVFWNESGSLV 479
Query: 479 AIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYN 538
+A+D S+++L + V+ +++ + +++ GVE AF +L E +E V+TGLWVGDCFIY
Sbjct: 480 CLATDDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYT 539
Query: 539 NSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTL 598
NS R+NY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE NV+ + L LS++EY+T
Sbjct: 540 NSVNRINYYVGGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTA 599
Query: 599 VMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVA 658
VMR D ERA+ +LP+IPKEH VA FLE +G +A++V+TD D++F+LA+Q+G LE+A
Sbjct: 600 VMRRDFERADVVLPTIPKEHRTRVAHFLEKQGFKSQALQVSTDADHKFDLALQIGDLEIA 659
Query: 659 QEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLAS 718
++A E ++ KW QL ++A S + + + CM++A D DA+ + + +
Sbjct: 660 LKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGA 719
Query: 719 LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDL 778
QG +N+AFL F+ +E CL++L+E+NR+PEAA AR+YLPS++S IV +WR+ L
Sbjct: 720 AGSAQGHHNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTYLPSQMSRIVELWREKL 779
Query: 779 QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPA 822
KVN KA +SLADP +Y+NLF AL VE R PA
Sbjct: 780 GKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPA 823
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 2457 (870.0 bits), Expect = 3.2e-255, P = 3.2e-255
Identities = 443/829 (53%), Positives = 600/829 (72%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL++KRKL RS+RVK VDLHP E W+LA+LY+G V IWNY++QT+ KSFEV ++PV
Sbjct: 1 MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFV RK WVV G+DDM IRV+NYNT+++V FEAH+DY+R + VHPTLPYV+SSSDD
Sbjct: 61 RAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
ML+K+WDW+ W Q FEGH+HYVMQ+ NPKD NTFA+ASLD+T+K+W GS PNFT
Sbjct: 121 MLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNCVDY+ GG+KPY+I+G+DDH K+WDYQ K+CVQTL+GH NVS+VCFHPE
Sbjct: 181 LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LP+IITGSED TVR+WHA TYRLE TLNYGLERVW I K + I IGYDEG++ +K+G
Sbjct: 241 LPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYE--VTDGERLPLAVKELGTCDLYPQS 358
REEP SMD+SGKI+WAKH+EIQ N+K++ + + DGERLPL+VK+LG+ ++YPQ+
Sbjct: 301 REEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQDGERLPLSVKDLGSSEIYPQT 360
Query: 359 LKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGE-YAVREXXXXXXXXXX 417
L H+ NGRFVV CGDGEYI+YTA+A RN+ FG LEFVW+ D +AVRE
Sbjct: 361 LAHSSNGRFVVACGDGEYIVYTAMALRNKDFGQGLEFVWAVDPNMFAVRESATNVKIKK- 419
Query: 418 NFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDL 477
NF++ +S+R E I GG LLA+ SN+ +CF+DW L+RRI++T K++YW+D+G++
Sbjct: 420 NFKDHKSIRSDMVLEGISGGPLLALRSNNSLCFFDWESAVLVRRIEITSKSIYWSDNGEM 479
Query: 478 VAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIY 537
VAI D SFY+LKY+ + V+ + V E G+EDAFE++ E E V+TG W+GDCFI+
Sbjct: 480 VAICGDDSFYVLKYSAEAVA----NATEVTEDGIEDAFEVIGEQAEAVKTGFWIGDCFIF 535
Query: 538 NNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKT 597
+ R+NY VGGE+ T+ H+DRP+YLLGY+A +SRVY +DK+ NV+ Y LLLS++EY+T
Sbjct: 536 TTALNRINYYVGGEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLNVISYKLLLSVLEYQT 595
Query: 598 LVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEV 657
VMR D + A+++L +IPKE VA FLE +G ++A+ V+ DPD++F+L++ LG L+
Sbjct: 596 AVMRRDFDTADKVLTTIPKEQRTRVAHFLEKQGFKKQALAVSQDPDHKFDLSVALGDLKT 655
Query: 658 AQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLA 717
A ++A + SE KWK L A +L +A C+ +A D A + KLA
Sbjct: 656 AYDLALQSDSEEKWKALSNAATLKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLA 715
Query: 718 SLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKD 777
+ +N++FL +LG ++ CL L+ + R+PEAA +AR++ PS+VS I+ +W+
Sbjct: 716 DDSAAAESHNISFLSSLLLGDIDACLDKLISTGRLPEAAFLARTHAPSRVSSILELWKAK 775
Query: 778 L----QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPA 822
+K + K ESLADP +Y NLF + +L ES + PA
Sbjct: 776 ASGHSEKSSRKIGESLADPVKYENLFPGFTQSLKAESFVREISKIPVPA 824
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 2420 (856.9 bits), Expect = 2.7e-251, P = 2.7e-251
Identities = 429/715 (60%), Positives = 560/715 (78%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
+LASLY+G+VC+WN+++QT+ K+FEV +LPVR+AKFVARK WVV GADDM IRV+NYNT+
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
++V +FEAH+DYIRC+AVHPT P++L+SSDDMLIKLWDW+K W C+Q+FEGH+HYVMQ+
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
NPKD N FASASLDRTIK+W LGS PNFTL+ H+KGVNC+DY++GGDKPYLI+G+DD
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
K+WDYQ K+CVQTLEGH NVS FHPELPIIITGSEDGTVRIWH++TYRLE+TLNY
Sbjct: 181 LVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNY 240
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKS 329
G+ERVW + ++ S + +GYDEG+I+VK+GREEP SMD +GKIIWAKH+E+Q N+K+
Sbjct: 241 GMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKA 300
Query: 330 VGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSF 389
+G D E+ DGERLPLAVK++G+C++YPQ+++HNPNGRFVVVCGDGEYIIYTA+A RN+SF
Sbjct: 301 MG-DAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSF 359
Query: 390 GSALEFVWSSDG-EYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFI 448
GSA EF W+ D EYA+RE NF+EK+S +P F AE IYGG LL + S + +
Sbjct: 360 GSAQEFAWAHDSSEYAIRESNSVVKIFK-NFKEKKSFKPDFGAESIYGGFLLGVRSVNGL 418
Query: 449 CFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDE 508
FYDW LIRRI++ K+++W+DSG+LV IA++ SF+ILKY + V A ++ + V E
Sbjct: 419 AFYDWENTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTE 478
Query: 509 QGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYL 568
G+ED FE+L E E V+TGLWVGDCFIY +S RLNY VGGE+ T+ HLDR MYLLGY+
Sbjct: 479 DGIEDGFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYI 538
Query: 569 ASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLES 628
+R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE
Sbjct: 539 PKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEK 598
Query: 629 RGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAE 688
+G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+
Sbjct: 599 QGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQ 658
Query: 689 GCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCL 743
C+ A D +A ++KLA A+ GKNNVAF+ F+ G L CL
Sbjct: 659 ECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGNLSKCL 713
Score = 193 (73.0 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 29 WILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
W++ + ++NY + FE +R + +++ +DDM I++++++
Sbjct: 42 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 101
Query: 89 MDKV-KVFEAHTDYIRCVAVHPT-LPYVLSSSDDMLIKLWDWEKGWMCTQI-FEGHSHYV 145
+VFE HT Y+ + ++P S+S D IK+W + G EGH V
Sbjct: 102 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVW--QLGSSSPNFTLEGHEKGV 159
Query: 146 MQVTF-NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLIT 204
+ + + D S + DR +KIW+ + TL+ H + V+C + + P +IT
Sbjct: 160 NCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIIT 217
Query: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTV 253
GS+D T ++W T TL V V + G ++G++
Sbjct: 218 GSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSI 266
Score = 182 (69.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 52/208 (25%), Positives = 95/208 (45%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQ-TMAKSFEVTELPVRSA 63
LE S+ ++ + +HP++P+IL S + +W++ + + ++ FE V
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQI 119
Query: 64 KFVARKQWVVAGAD-DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSDD 120
+ A A D I+V+ + E H + C+ + PY++S +DD
Sbjct: 120 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADD 179
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
L+K+WD++ C Q EGH+ V +F+P + + S D T++IW+ + T
Sbjct: 180 RLVKIWDYQNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLEST 237
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDD 208
L+ + V CV G + L G D+
Sbjct: 238 LNYGMERVWCVASLRGSNNVAL--GYDE 263
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 2342 (829.5 bits), Expect = 1.7e-244, Sum P(2) = 1.7e-244
Identities = 429/825 (52%), Positives = 582/825 (70%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS 62
+RL+IKR+L RSERVK +D HP+EPWIL +LYSG V IW+Y++Q++ K+FE+T++PVR+
Sbjct: 1 MRLDIKRQLFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRA 60
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
+F+ARK W+V G+DD +R+YNYNT +K+ FEAH DYIR +AVHPT P+VL++SDDM
Sbjct: 61 GRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMT 120
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
IKLWDWEKGW C Q++EGHSHYVM + NPKDTNTFASA LDRT+KIW+LGSP NFTL+
Sbjct: 121 IKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLE 180
Query: 183 AHQ-KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
AH+ KGVN VDY+ DKPYL+T SDD T KVWDY TK+ + TLEGHT NVS C+HPEL
Sbjct: 181 AHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPEL 240
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGR 301
P+II+GSEDGT++IWHA TYRLE +L+YGLER W + Y + + + +G+D+G ++VK+GR
Sbjct: 241 PVIISGSEDGTIKIWHANTYRLEQSLSYGLERAWCVSYQRGKQGVALGFDDGAVVVKMGR 300
Query: 302 EEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKH 361
EEP SMD SGKI+WA+HNE+ + IK G D V DG + L K+LG+C++YPQ+L H
Sbjct: 301 EEPAVSMDGSGKIVWARHNEVVSTVIK--GGDTSVKDGAPISLPTKDLGSCEVYPQTLSH 358
Query: 362 NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSS---DGEYAVREXXXXXXXXXXN 418
+PNGRFV VCGDGEYIIYTALAWRN++FG AL+F W S +YA+RE N
Sbjct: 359 SPNGRFVSVCGDGEYIIYTALAWRNKAFGQALDFAWGSKDNSNDYAIRESATSVKIFK-N 417
Query: 419 FQE-KRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDL 477
F+E + F AE + GG LL + I +DW L+RRI+V +N+YW++SG+L
Sbjct: 418 FKEVSGGLDVGFQAEGLTGGVLLGVRGQGGIGMFDWETGNLVRRIEVEPRNVYWSESGEL 477
Query: 478 VAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIY 537
V +A D +FY+L+++R+ L++G+ DE GVE AFE++ + NE VRTG WVGDCFIY
Sbjct: 478 VTLACDDTFYVLRFSRENYINGLNAGE-ADEDGVESAFEVVTDVNESVRTGQWVGDCFIY 536
Query: 538 NNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKT 597
NS+ RLNY VG + T+ H D+PMY+LGYL RVY+ DK+ N + + L LS++EY+T
Sbjct: 537 TNSTNRLNYLVGDQTYTISHFDQPMYVLGYLPRDGRVYVADKDVNAVSFALSLSMVEYQT 596
Query: 598 LVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEV 657
+V+RGD+E A E+L IP++ N VARFLE +G E A+EVATD ++RFELA+ L L++
Sbjct: 597 VVLRGDMELAAELLQDIPQDQMNKVARFLEGQGYKELALEVATDQEHRFELALALNNLDI 656
Query: 658 AQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLA 717
A EIA +E KWK +G+ A+S L +A+ C A D + EG+ LA
Sbjct: 657 ALEIARAANAEHKWKVVGDAALSAWNLSLAQECFISAKDVGSLLLLHTASGNREGLQALA 716
Query: 718 SLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKD 777
S A + G +NVAF L+ LG ++ C+ LLV++NR+ E+ L A++Y PS+ E+V W++
Sbjct: 717 SQASDAGLHNVAFSTLWSLGDVDGCIDLLVQTNRLAESVLFAQTYKPSRAPELVVRWKES 776
Query: 778 L-QKVNPKAAESLADPEEY------SNLFDDWQVALAVESKAAAT 815
L Q K + + P +LF +W+ L +E + T
Sbjct: 777 LEQSGKAKISRLIGVPPGAPGVPADDDLFPEWEEYLRLEKEGVVT 821
Score = 37 (18.1 bits), Expect = 1.7e-244, Sum P(2) = 1.7e-244
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 883 VVVDADSTDGAVLVNGNEAEEQWGTN 908
VV + S+ + V+G +AE + TN
Sbjct: 819 VVTEPASSGSLIDVDGEDAEPEPETN 844
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 2023 (717.2 bits), Expect = 3.1e-209, P = 3.1e-209
Identities = 362/793 (45%), Positives = 522/793 (65%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS 62
+RL+ +RKL +ERVK+VD HP+EPW++AS Y+G V IWNY +QT+ +SF++ ++P+R+
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRA 61
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
F+ARK W V G+DD +RVYNYNT +KV FEAH DYIR + VHPT P++L+SSDDM
Sbjct: 62 CAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMT 121
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
IK ++W+ W C Q FEGHS YVM + NPKDTNTFAS+ LD T+K+W+ GS NFTL
Sbjct: 122 IKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ 181
Query: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
AH +GVN V+Y+ GDKPYLIT DD+ KVWDYQTK+CV+ LEGHT+NVS FH + P
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFP 241
Query: 243 IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGRE 302
III+GSEDGTV+IWH +Y L + N+ L+R W I K + + +G+D G I +GR+
Sbjct: 242 IIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLITFSLGRD 301
Query: 303 EPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHN 362
EP +MD+SGK++W+ +NE+ + I+ ++TDG + L+VKELGT +LYP LKH+
Sbjct: 302 EPSVTMDSSGKVVWSNYNEVMSAMIRPAKEQSDLTDGSLISLSVKELGTTELYPAVLKHS 361
Query: 363 PNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVREXXXXXXXXXXNFQEK 422
PNGRFV VCG+GEYI+YTALAWRN+++G AL+F WS+D NF+E
Sbjct: 362 PNGRFVSVCGNGEYIVYTALAWRNKAYGKALDFAWSADSNVYGSRTSDRSIVIHKNFKES 421
Query: 423 RSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIAS 482
+ ++S ++I+GG LL + +DFICFYDW L+R+IDV K +YW D G V +A
Sbjct: 422 NRLDLSYSCDKIFGGFLLGVVGSDFICFYDWDTGILVRKIDVKPKGVYWNDDGRFVILAC 481
Query: 483 DTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSW 542
D FY+L +N ++ + ++SG +E+GV D+FE L + +E V G WV + FIY ++
Sbjct: 482 DDDFYLLGFNAEMFYSAVESGTADEEEGVADSFEALADVSESVVNGKWVAETFIYTTTAA 541
Query: 543 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRG 602
RLNY +G + + +++ YLLGY+ R+YL D++ NV+ Y+ L++IEY++LV++G
Sbjct: 542 RLNYLIGDQTYKIANVESSFYLLGYIPRDDRIYLTDRDMNVVSYSFNLAIIEYQSLVLKG 601
Query: 603 DLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIA 662
DLE A +L I + ++ FL G E A+E++ D RFELA+ RL++A +IA
Sbjct: 602 DLEAAQGLLEQISETDRPRLSDFLSRLGYKEAALELSGDSVQRFELALDAQRLDIASQIA 661
Query: 663 TEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKE 722
E+ KW+ LG+ A++ +A+ C ++ D + EG+ +L+ L K
Sbjct: 662 QELDDPLKWRSLGDAALNAWDFVLAQECFEKGKDYGSLVLLYTATNNHEGLKELSQLTKS 721
Query: 723 QGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVN 782
NN AF+C ++ + +C+ +L + R PEA L A +Y P +V ++ W+ DL K N
Sbjct: 722 TKINNTAFICSWLTNQPAECVNILTSTQRYPEANLFAATYCPDEVKNVLPEWKVDLTK-N 780
Query: 783 PKA--AESLADPE 793
K A+SL D E
Sbjct: 781 QKERIADSLGDLE 793
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 1896 (672.5 bits), Expect = 9.0e-196, P = 9.0e-196
Identities = 359/776 (46%), Positives = 512/776 (65%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS 62
++L+IK+ + RS+RVK +D HP+EPW+L +LYSG V +WNY++Q +S +VTE PVR+
Sbjct: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
KF+ARK W++ G+DD IRV+NYNT +KV FEAH DYIR +AVHPT PYVLS SDD+
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
+KLW+WE W Q FEGH H+VM V FNPKD +TFAS LDRT+K+W+LG PNFTL
Sbjct: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 183 AHQ-KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
Q +GVN VDY+ DKPY+IT SDD T K+WDYQTKSCV TLEGH NVS FHP L
Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR--IVIGYDEGTIMVKI 299
PIII+GSEDGT++IW+++TY++E TLN GLER W I + R+ I G+D G ++ +
Sbjct: 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300
Query: 300 GREEPVASMDNSGKIIWA--KHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ 357
G +EP S+D GK++W+ K+ + + + EV E L L KELG+ D++PQ
Sbjct: 301 GNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360
Query: 358 SLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGE-YAVREXXXXXXXXX 416
SL H+PNGRFV V GDGEY+IYTALAWRN++FG +FVW D YA+ +
Sbjct: 361 SLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK 420
Query: 417 XNFQEKRSVR-PTFSA-ERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADS 474
NF+E S P SA +R++ G LL + S+ F+ F+DW L+RRIDV K++ W+D+
Sbjct: 421 -NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDN 479
Query: 475 GDLVAIAS------DTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
G+LV I + + S Y L +N+D ++G D +GV++AF++L+E +E + +G
Sbjct: 480 GELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSG 539
Query: 529 LWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTL 588
WVGD FI+ ++ RLNY VGG+ + H + MYLLGYLA ++VYL D+E +V GY +
Sbjct: 540 KWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEI 599
Query: 589 LLSLIEYKTLVMRGDLERANE-ILPSIP-KEHHNSVARFLESRGMIEEAIEVATDPDYRF 646
L ++E++TL +RG++E A E +LP++ K+ +ARFLE + EEA+ ++ D D +F
Sbjct: 600 SLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKF 659
Query: 647 ELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXX 706
ELA+++G+L +A+++ T+ +E KW+ LG+ ++ ++A A D
Sbjct: 660 ELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSS 719
Query: 707 XXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY 762
+ EG+ LA A+ GK N+AF ++ G ++ LL++S R EAA + +Y
Sbjct: 720 FNNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTY 775
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 1474 (523.9 bits), Expect = 7.1e-180, Sum P(2) = 7.1e-180
Identities = 264/491 (53%), Positives = 363/491 (73%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS 62
++L++ ++ + RS+RVK +D HP+EPWIL +LY+G + IW+Y + ++ KS +VTELPVR+
Sbjct: 1 MKLDVVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRA 60
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
KF+ARK W+V G+DD IRVYNYNT +KV FEAH DYIR +AVHP+ PY+L+SSDD+
Sbjct: 61 GKFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLT 120
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
IKLW+W+ W Q FEGH HYVM V FNPKD NTFASA LDRT+KIW+LGS PNFTL
Sbjct: 121 IKLWNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLI 180
Query: 183 AHQ-KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
AH+ KGVN VDY+ DKPYLIT SDD T KVWDYQTKSCV TLEGH NVS FHPEL
Sbjct: 181 AHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPEL 240
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGR 301
PII++GSEDGT+R W++ T++LE ++NY LER W IG + S I G+D G +++K+G
Sbjct: 241 PIIVSGSEDGTIRFWNSNTFKLEKSINYSLERAWCIGILPKSNVIAAGFDSGFVIIKLGS 300
Query: 302 EEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKH 361
EEP+ SMD++ K+I+AK++E+ IK ++ + DGE L L ++LG+ +++PQ+L H
Sbjct: 301 EEPLFSMDSNNKLIYAKNSEVYQSVIKPSSSE-GLKDGESLNLQQRDLGSIEIFPQTLNH 359
Query: 362 NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSS-DGE----YAVREXXXXXXXXX 416
+PNGR+ VCGDGEYI+YTALAWR++S+GSAL+FVW+S D +A+RE
Sbjct: 360 SPNGRYAAVCGDGEYIVYTALAWRSKSYGSALDFVWNSHDSSAACPFAIRESGVSVKIFK 419
Query: 417 XNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVT--VKNLYWADS 474
NFQE ++ + A++I+ G+LL + S I FYDW +L+RR+D+ + ++ W+D+
Sbjct: 420 -NFQEYLTLDLIYQADKIFTGSLLGVKSEGCISFYDWEHGKLVRRVDLDDDIIDVIWSDN 478
Query: 475 GDLVAIASDTS 485
G+L+AI + ++
Sbjct: 479 GELLAIVTTSN 489
Score = 294 (108.6 bits), Expect = 7.1e-180, Sum P(2) = 7.1e-180
Identities = 83/248 (33%), Positives = 136/248 (54%)
Query: 464 VTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHE--T 521
VT NL + V + + Y L YN ++ L +G+ E+G E AF++L+ T
Sbjct: 485 VTTSNL--GEISSTVGVKKNNETYFLSYNHELFEEALANGELDAEEGAESAFDVLYTLPT 542
Query: 522 NERVRTGLWVGDCFIYNNSSW-RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKE 580
+E + +G ++GD F+Y + RLNY VGGEV + H DR Y++GY A+ ++YLIDK
Sbjct: 543 SESILSGKFIGDVFVYTTGTTNRLNYFVGGEVINLGHFDRKFYIIGYKATDGKLYLIDKS 602
Query: 581 FNVMGYTLLLSLIEYKTLVMRGDLER-ANEILPSIPKEHHNSVARFLESRGMIEEAIEVA 639
F+V+ + + ++E +TLVMRGDLE+ A + + + KEH + G +EE EV
Sbjct: 603 FDVVSWYVNAEVLELQTLVMRGDLEQFATQNIV-VEKEHGEN--------GEVEEE-EVP 652
Query: 640 TDPDYRFE-LAIQLGRLEVAQEIATEVQSESKW-KQLGELAMSTG---------KLEMAE 688
E L+ + +L +++ TE+ S++ ++LG LA+S +L ++
Sbjct: 653 DLSTITLENLSEEYSQL-ISRFTKTELNQLSRFFEKLGYLALSFSLSQDFDSKFQLSLST 711
Query: 689 GCMKQAMD 696
G +KQA D
Sbjct: 712 GNLKQAYD 719
Score = 236 (88.1 bits), Expect = 9.6e-174, Sum P(2) = 9.6e-174
Identities = 62/246 (25%), Positives = 121/246 (49%)
Query: 565 LGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVAR 624
L A+Q+ V ++KE G + + T+ + E ++++ K N ++R
Sbjct: 626 LEQFATQNIV--VEKEHGENGEVEEEEVPDLSTITLENLSEEYSQLISRFTKTELNQLSR 683
Query: 625 FLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSES---------KWKQLG 675
F E G + + ++ D D +F+L++ G L+ A ++ + + E+ KWK+LG
Sbjct: 684 FFEKLGYLALSFSLSQDFDSKFQLSLSTGNLKQAYDLLSAQEKETPSLSLANSTKWKKLG 743
Query: 676 ELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFM 735
+LA++ +++A+ A D + + KLA + + +GK N+A+ ++
Sbjct: 744 DLALNKWNIKLAQESFWLAKDYSSLLLLLSSTQNKSQLIKLAEVCESKGKYNIAWQSWWL 803
Query: 736 LGKLEDCLQLLVESNRIPEAALMARSYL--PSKVSEIVAIWRKDLQKVNP-KAAESLADP 792
+G + C LL+ S R EA + ++Y P K+ + + +W++ L K N K A L D
Sbjct: 804 VGDVGKCFDLLITSERYTEAVIFGKNYGVDPEKLIKAIELWKQTLHKKNKSKVANRLID- 862
Query: 793 EEYSNL 798
++SNL
Sbjct: 863 -DFSNL 867
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 132/286 (46%), Positives = 193/286 (67%)
Query: 15 SERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVA 74
S+RVKSVD H +PWIL +L++G V IWNY ++T+ K+ EV+E R+AKF+ RK W+
Sbjct: 107 SDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIAT 166
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
+DD IR+++ T + F AH+D+IR + VHPTLPY++S+SDD I++WDWE W
Sbjct: 167 ASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRM 226
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
Q F+ H+HY+MQ+ NP+D F S SLD+T+K+W LG + TL+ H+KGVNCV++
Sbjct: 227 EQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFL 286
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG-HTHNVSAVCFHPELPIIITGSEDGTV 253
TGG +++GSDD + VWD QT+ C++TL+ H +NV+ V P II+G+ED TV
Sbjct: 287 TGGR---IVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVT--PFKTWIISGAEDSTV 341
Query: 254 RIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKI 299
+IW++ T+ LE LN+ R W + KS I +G+D G + V+I
Sbjct: 342 KIWNSQTFSLEKELNFEKGRAWCVAAGKSDA-IAVGFDSGAVTVEI 386
Score = 174 (66.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 55/223 (24%), Positives = 107/223 (47%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
F +H+D ++ V H P++L++ +++W+++ + + E F +
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTL-VKAMEVSEKSTRAAKFIHRK 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
N A+AS D+ I+I++ + AH + + PYLI+ SDD +VW
Sbjct: 162 -NWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHP--TLPYLISASDDRKIRVW 218
Query: 215 DYQTK-SCVQTLEGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHATTYRLENTLNYGLE 272
D++ + Q + H H + + +PE P + ++GS D T+++W TL G E
Sbjct: 219 DWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLE-GHE 277
Query: 273 R-VWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGK 313
+ V + ++ R IV G D+ +I V I ++ + ++ N+ K
Sbjct: 278 KGVNCVEFLTGGR-IVSGSDDCSICVWDIQTQKCIETLKNAHK 319
>WB|WBGene00008476 [details] [associations]
symbol:E03H4.8 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR006692 Pfam:PF04053
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0030117 GO:GO:0016192
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0018996 eggNOG:COG2319
GO:GO:0040011 GO:GO:0007276 GeneTree:ENSGT00640000091529
EMBL:Z81492 PIR:T20438 RefSeq:NP_493151.1 ProteinModelPortal:O17742
SMR:O17742 EnsemblMetazoa:E03H4.8 GeneID:184023
KEGG:cel:CELE_E03H4.8 UCSC:E03H4.8 CTD:184023 WormBase:E03H4.8
InParanoid:O17742 NextBio:923224 Uniprot:O17742
Length = 368
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 141/316 (44%), Positives = 207/316 (65%)
Query: 297 VKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYP 356
V++ E P SMD++G+I+WA +EIQ V ++S+ E DGERL L+VK LG+ ++ P
Sbjct: 5 VQLSIENPAVSMDSTGQILWAVQSEIQAVYLRSLFEQKEANDGERLTLSVKNLGSSEISP 64
Query: 357 QSLKHNPNGRFVVVCGDGEYIIYT-----ALAWRNRSFGSALEFVWSSDGE-YAVREXXX 410
Q+L H+ NG F + CGDG+YI+YT A+A + R +G LEFVW++ +AVRE
Sbjct: 65 QTLAHSSNGHFFMACGDGKYIVYTYKQYDAIALKIRHYGQGLEFVWAAHPNMFAVRESAT 124
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLY 470
NF++ +S+R E I GG LLA+ SND +CF+DW L+RRI++T K++Y
Sbjct: 125 NVKIKK-NFKDHKSIRSDMMLEGISGGPLLALRSNDSLCFFDWESAALVRRIEITSKSVY 183
Query: 471 WADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLW 530
W+D+ ++VAI D SFY+ KY+ + V+ + V E G+EDAF+++ E E V TG W
Sbjct: 184 WSDNREMVAICGDDSFYVFKYSAEAVA----NATEVTEDGIEDAFKVIGEQAEAVETGFW 239
Query: 531 VGDCFIYNNSSW--RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTL 588
+GDCFI+ + R+N+ GGE+ T+ H+DRP+ LLGY+A SRVY +DK+ NV+ Y L
Sbjct: 240 IGDCFIFTTALTINRINHYAGGEIVTVAHVDRPLCLLGYMAEDSRVYAVDKDLNVISYEL 299
Query: 589 LLSLIEYKTLVMRGDL 604
S +EY+T MR D+
Sbjct: 300 FQSDLEYQTATMRRDI 315
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 411 (149.7 bits), Expect = 8.8e-68, Sum P(2) = 8.8e-68
Identities = 158/650 (24%), Positives = 283/650 (43%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVC 236
+ L+ H +GVN + P +++G+DD K+W +TK+ V TL GH +NVS+V
Sbjct: 198 YVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIM 296
FH + II++ SED ++R+W AT T +R W + + G+D G I+
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAGHDNGMIV 315
Query: 297 VKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLY- 355
K+ RE P ++ + +AK ++ S D +V +P ++ GT L
Sbjct: 316 FKLERERPAFALSGDS-LFYAKDRFLRYYEY-STQKDSQV-----IP--IRRPGTPSLNQ 366
Query: 356 -PQSLKHNPNGRFVVVCGD---GEYIIYT----------ALAWRNRSFGSALEFVWSSDG 401
P++L ++P V++C D G Y +Y + R G + F+ +
Sbjct: 367 SPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFI--ARN 424
Query: 402 EYAVREXXXXXXXXXXNFQE--KRSVRPTFSAERIYGGTLLAMC-SNDFICFYDWAECRL 458
+AV E E K+S P + Y GT +C S D + +D + +
Sbjct: 425 RFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 459 IRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFEL 517
+ + V+ + W++ + VA+ S + I + K + Q
Sbjct: 485 LGELQTPFVRYVVWSNDMESVALLSKHTIII-------------ASKKLVLQCT------ 525
Query: 518 LHETNERVRTGLWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVY 575
LHET RV++G W + FIY + + YC+ G+ + LD P+Y+ S + ++
Sbjct: 526 LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLDVPIYITK--VSGNTIF 581
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEA 635
+D++ T+ + +K ++R + ++ + +A +L+ +G E A
Sbjct: 582 CLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQLCGQAMIA-YLQQKGFPEVA 640
Query: 636 IEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAM 695
+ D RF LA++ G + VA ATE+ + W +LG A+ G + E +Q
Sbjct: 641 LHFVEDERIRFNLALESGNISVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQTK 700
Query: 696 DXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVA--FLCLFMLGKLEDCLQLLVESNRIP 753
+ + + +SKL +A+ KNNV F LG +++ +++L + +P
Sbjct: 701 NFERLSFLYLITGNLDKLSKLMKIAEV--KNNVMGQFHNALYLGDVKERVKILENAGHLP 758
Query: 754 EAALMARSYLPSKVSEIVAIWRKDLQKVNPKA-AESLADPEEYSNLFDDW 802
A + A + + ++E +AI D P+ SL P DW
Sbjct: 759 LAYITASVHGLTDIAERLAIELGDNVPSLPEGKTPSLLMPPSPIMCGGDW 808
Score = 367 (134.2 bits), Expect = 8.8e-68, Sum P(2) = 8.8e-68
Identities = 67/165 (40%), Positives = 102/165 (61%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ E PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
C + GH+HYVM +F+PK+ + SASLD+T+++W++G+
Sbjct: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA 166
Score = 266 (98.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 51/162 (31%), Positives = 90/162 (55%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
FE ++ ++ ++ HP P++L+S +I+LWD+ G + + F+ H V V F+
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHEGPVRGVHFHNSQ 63
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
F S D IK+WN + FTL H + V + + P++++ SDD T ++W
Sbjct: 64 P-LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHH--ENPWIVSASDDQTIRIW 120
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
++Q+++C+ L GH H V FHP+ ++++ S D TVR+W
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 196 (74.1 bits), Expect = 8.8e-50, Sum P(2) = 8.8e-50
Identities = 49/167 (29%), Positives = 77/167 (46%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++A I++++Y + F+ H +R V H
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
+ P +S DD IK+W++ K C GH Y+ V F+ ++ SAS D+TI+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNY-KTHRCLFTLLGHLDYIRTVQFHHENP-WIVSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
IWN S L H V C + D +++ S D T +VWD
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
Score = 184 (69.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 45/127 (35%), Positives = 70/127 (55%)
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHQKGVNC 190
M T+ FE S+ V ++F+PK AS I++W+ +G+ F D H+ V
Sbjct: 1 MLTK-FETKSNRVKGLSFHPKRPWILASLH-SGVIQLWDYRMGTLIDRF--DEHEGPVRG 56
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
V + +P ++G DD+ KVW+Y+T C+ TL GH + V FH E P I++ S+D
Sbjct: 57 VHFHNS--QPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDD 114
Query: 251 GTVRIWH 257
T+RIW+
Sbjct: 115 QTIRIWN 121
Score = 100 (40.3 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+++V H PWI+++ T+ IWN+QS+T V A F ++ VV+ +
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 78 DMFIRVYNYNTMDK 91
D +RV++ + K
Sbjct: 156 DQTVRVWDIGALKK 169
Score = 40 (19.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 322 IQTVNIKSVGADYEVTDGERLPLAVKE--LGT-CDLYPQSLKHNP 363
+QT+ + V + EV + + L + VKE LG +L + +K +P
Sbjct: 1030 LQTIPLVVVESRREVDEVKELVIIVKEYVLGLQLELKRREMKDDP 1074
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 400 (145.9 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 150/621 (24%), Positives = 275/621 (44%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVC 236
+ L+ H +GVN + P +++G+DD K+W +TK+ V TL GH +NVS+V
Sbjct: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIM 296
FH + II++ SED ++R+W AT T +R W + + G+D G I+
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMIV 315
Query: 297 VKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLY- 355
K+ RE P ++ + +AK ++ S D +V +P ++ GT L
Sbjct: 316 FKLERERPAFALSGDS-LFYAKDRFLRYYEY-STQRDSQV-----IP--IRRPGTPSLNQ 366
Query: 356 -PQSLKHNPNGRFVVVCGD---GEYIIYT----------ALAWRNRSFGSALEFVWSSDG 401
P++L ++P V++C D G Y +Y + R G + F+ +
Sbjct: 367 SPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVFI--ARN 424
Query: 402 EYAVREXXXXXXXXXXNFQE--KRSVRPTFSAERIYGGTLLAMC-SNDFICFYDWAECRL 458
+AV E E K+S P + Y GT +C S D + +D + +
Sbjct: 425 RFAVLEKSTSQVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLV 484
Query: 459 IRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFEL 517
+ + V+ + W+ + VA+ S + I + K + Q
Sbjct: 485 LGELQTPFVRYVVWSSDMESVALLSKHTIII-------------ASKKLVLQCT------ 525
Query: 518 LHETNERVRTGLWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVY 575
LHET RV++G W + FIY + + YC+ G+ + LD P+Y+ S + ++
Sbjct: 526 LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLDVPIYITK--VSGNTIF 581
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEH--HNSVARFLESRGMIE 633
+D++ T+ + +K ++R +R + ++ I ++ +L+ +G E
Sbjct: 582 CLDRDGKNKAITINATEYIFKLSLLR---KRYDHVMSMIKNSQLCGQAMIAYLQQKGFPE 638
Query: 634 EAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQ 693
A+ D RF LA++ G + VA AT++ + W +LG A+ G + E +Q
Sbjct: 639 VALHFVEDERIRFNLALESGNISVAVASATQINEKDHWYRLGVEALRQGNSGIVEFAYQQ 698
Query: 694 AMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVA--FLCLFMLGKLEDCLQLLVESNR 751
+ + + +SKL +A+ KNNV F LG +++ +++L +
Sbjct: 699 TKNFERLSFLYLITGNLDKLSKLMKIAEV--KNNVMGQFHNALYLGDVKERVKILENAGH 756
Query: 752 IPEAALMARSYLPSKVSEIVA 772
+P A + A + + ++E +A
Sbjct: 757 LPLAYITASVHGLNDIAERLA 777
Score = 365 (133.5 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 66/165 (40%), Positives = 101/165 (61%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ E PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
C + GH+HYVM +F+PK+ + SASLD+T+++W++G+
Sbjct: 124 SR-TCVSVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGA 166
Score = 265 (98.3 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 52/162 (32%), Positives = 90/162 (55%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
FE ++ ++ ++ HP P++L+S +I+LWD+ G + + F+ H V V F+
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHEGPVRGVHFHNSQ 63
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
F S D IK+WN + FTL H + V + + P++++ SDD T ++W
Sbjct: 64 P-LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
++Q+++CV L GH H V FHP+ ++++ S D TVR+W
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 196 (74.1 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 49/167 (29%), Positives = 76/167 (45%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++A I++++Y + F+ H +R V H
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
+ P +S DD IK+W++ K C GH Y+ V F+ + SAS D+TI+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNY-KNHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
IWN S L H V C + D +++ S D T +VWD
Sbjct: 119 IWNWQSRTCVSVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
Score = 181 (68.8 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 44/127 (34%), Positives = 69/127 (54%)
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN--LGSPDPNFTLDAHQKGVNC 190
M T+ FE S+ V ++F+PK AS I++W+ +G+ F D H+ V
Sbjct: 1 MLTK-FETKSNRVKGLSFHPKRPWILASLH-SGVIQLWDYRMGTLIDRF--DEHEGPVRG 56
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
V + +P ++G DD+ KVW+Y+ C+ TL GH + V FH E P I++ S+D
Sbjct: 57 VHFHNS--QPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDD 114
Query: 251 GTVRIWH 257
T+RIW+
Sbjct: 115 QTIRIWN 121
Score = 133 (51.9 bits), Expect = 0.00013, P = 0.00013
Identities = 39/113 (34%), Positives = 60/113 (53%)
Query: 68 RKQWVVAGADDMFIRVYNYNT-----MDK-VK-VFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RK+ V+ ADD+ +R+ N+ +D VK V E H + A HPTLP ++S +DD
Sbjct: 168 RKK-TVSPADDI-MRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADD 225
Query: 121 MLIKLWDWE--KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
+KLW K W + GH + V V F+ K + S S D++I++W+
Sbjct: 226 RQVKLWRMNETKAWEVDTL-RGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWD 276
Score = 103 (41.3 bits), Expect = 8.5e-39, Sum P(2) = 8.5e-39
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+++V H PWI+++ T+ IWN+QS+T V A F ++ VV+ +
Sbjct: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL 111
D +RV++ + K V A D +R ++ L
Sbjct: 156 DQTVRVWDIGALRKKTVSPAD-DIMRLTQMNSDL 188
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 374 (136.7 bits), Expect = 5.6e-59, Sum P(3) = 5.6e-59
Identities = 142/655 (21%), Positives = 282/655 (43%)
Query: 173 GSPDP--NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGH 228
G PD L+ H +GVN V + P L++GSDD K+W Y +TK+ + + GH
Sbjct: 193 GQPDAVVKHVLEGHDRGVNWVAFHH--TNPILVSGSDDRQVKIWRYNETKAWELDSCRGH 250
Query: 229 THNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI 288
+NVS+V FHP +I++ SED ++R+W + + ER W + S
Sbjct: 251 YNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAA 310
Query: 289 GYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKE 348
G+D G ++ KI RE P + ++ + + K +I+ +++ + D + R P +
Sbjct: 311 GHDNGMVVFKIQRERPAYCVSDN-LVFYVKGQQIRKLDL-TTNKDVALCK-LRYPQPFMQ 367
Query: 349 LGTCDLYPQSLKHNP-NGRFVVVCG--DGEYIIYTALAWRNRSFGSA---------LEFV 396
Y SL NP G F++ + + + + S G+ + +
Sbjct: 368 ----PYY--SLSFNPAEGTFLLTSRTHNKDLCAFELYKVASNSDGTTEAACVKSTGINAL 421
Query: 397 WSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSA--ERIYGGT-LLAMCSNDFICFYDW 453
W + +AV + +E R + +A + Y GT +L + ++D + +D
Sbjct: 422 WVARNRFAVLDKAQNVSLRDLTNKELRKLENINTAVDDIFYAGTGMLLLRNDDGLQLFDV 481
Query: 454 AECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVE 512
+ + + V+ V+ + W+ S + A+ S + ++ +++ +S
Sbjct: 482 QQKIVTASVKVSKVRYVIWSKSMEFAALLSKHTLTLVNRKLEILCTQQES---------- 531
Query: 513 DAFELLHETNERVRTGLWVGDC-FIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLAS 570
RV++G W D F+Y S+ + Y + G+ + LD P+Y+L +
Sbjct: 532 ----------TRVKSGAWDDDSVFLYTTSN-HIKYAINSGDCGIVRTLDLPLYILAIRGN 580
Query: 571 QSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRG 630
+Y ++++ + + S ++K ++ ++ ++ S S+ +LE +G
Sbjct: 581 V--LYCLNRDATPVEVPIDNSDYKFKLALINKRIDEVVNMVRSANLVGQ-SIIGYLEKKG 637
Query: 631 MIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGC 690
E A+ D RF LAI+ G LE+A E A ++ + W+ LGE A+ G ++ E
Sbjct: 638 YPEIALHFVKDEKTRFGLAIECGNLEIALEAAKKLDEPAVWEALGETALLQGNHQIVEMS 697
Query: 691 MKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 750
++ + + + + K+ +A+ + + F G +E+ +++L
Sbjct: 698 YQRTKNFEKLSFLYFVTGNTDKLVKMMKIAQARNDAHGHFQTALYTGDVEERVKVLRNCG 757
Query: 751 RIPEAALMARSY-LPSKVSEIVAIWRKDLQKVNP--KAAESLADPEEYSNLFDDW 802
+ A L A ++ ++ E+ A Q + P A L P + L ++W
Sbjct: 758 QTSLAYLAAATHGYSAEAEELKAELESRQQPIPPVDPNARLLVPPPPVARLEENW 812
Score = 326 (119.8 bits), Expect = 5.6e-59, Sum P(3) = 5.6e-59
Identities = 59/163 (36%), Positives = 96/163 (58%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP+ PW+L SL+SG + +W+Y+ + + F+ + PVR F +
Sbjct: 6 KFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQ 65
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P+++S+SDD +++W+W+
Sbjct: 66 PIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQ 125
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
I GH+HYVM F+P + + ASASLD+T+++W++
Sbjct: 126 SR-NSIAILTGHNHYVMCAQFHPTE-DLVASASLDQTVRVWDI 166
Score = 258 (95.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 70/252 (27%), Positives = 117/252 (46%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE+ + ++ ++ HPT P+VL+S +I+LWD+ MC + F+ H V + F+
Sbjct: 7 FESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYR---MCVLLEKFDEHDGPVRGICFH- 62
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
D F S D IK+WN FTL H + F P++I+ SDD T +
Sbjct: 63 HDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTT--FFHHKYPWIISASDDQTVR 120
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL- 271
+W++Q+++ + L GH H V FHP ++ + S D TVR+W + R + G
Sbjct: 121 IWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQMPGGGAP 180
Query: 272 ------ERVWAIGYMKSS-RRIVIGYDEGTIMVKIGREEP--VASMDNSGKIIWAKHNEI 322
++ G + + ++ G+D G V P V+ D+ IW ++NE
Sbjct: 181 SRPTGGQQAELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIW-RYNET 239
Query: 323 QTVNIKSVGADY 334
+ + S Y
Sbjct: 240 KAWELDSCRGHY 251
Score = 140 (54.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 51/238 (21%), Positives = 96/238 (40%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+++ H PWI+++ TV IWN+QS+ V A+F + V + +
Sbjct: 98 IRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASL 157
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +RV++ + + K ++ P+ P + +L+ + + +
Sbjct: 158 DQTVRVWDISGLRKKQMPGGGA---------PSRP-----TGGQQAELFG-QPDAVVKHV 202
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP--NFTLDAHQKGVNCVDYFT 195
EGH V V F+ + S S DR +KIW + H V+ V +
Sbjct: 203 LEGHDRGVNWVAFHHTNP-ILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHP 261
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTV 253
D +++ S+D + +VWD Q ++ + + HP L + G ++G V
Sbjct: 262 NAD--LILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAAGHDNGMV 317
Score = 45 (20.9 bits), Expect = 5.6e-59, Sum P(3) = 5.6e-59
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 758 MARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFD 800
+ R YL + + E +RKDL K N + A+ A+ Y F+
Sbjct: 1065 ITREYLAALLLET---YRKDLPKTNLEDAKRNAELAAYFTHFE 1104
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 368 (134.6 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 68/163 (41%), Positives = 104/163 (63%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K ++ RVK + HP+ PWILASL+SG++ +++Y+ +T+ + F+ E PVR F +
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + + H DYIR V H P+++SSSDDM+I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
C GH+HYVM F+PKD + SASLD+TI+IW++
Sbjct: 124 SR-TCIAELNGHNHYVMSALFHPKD-DLVVSASLDQTIRIWDI 164
Score = 277 (102.6 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 132/622 (21%), Positives = 250/622 (40%)
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
+L+ H +GVN + +PY+++ SDDH K+W V T GH +NVS FHP
Sbjct: 199 SLEGHDRGVNWASFHP--TQPYIVSASDDHQVKLWR-MNDPIVDTFRGHYNNVSCALFHP 255
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKI 299
+II+ SED T+R+W + + +R W + + G+D G I+ K+
Sbjct: 256 RQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAAGHDSGMIVFKL 315
Query: 300 GREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSL 359
RE P+ + + + K + + ++ G + +LP GT Q++
Sbjct: 316 ERERPLFVQNGDSGVFFLKKKNFNSFDFQA-GRTVSLFHISKLP---SNNGT-----QTM 366
Query: 360 KHNPNGRFVVVCGD---GEYIIYTALAWR----NRSFGSALEFVWSSDGEYAVREXXXXX 412
+N R ++V D G Y +Y N G+ + ++ +AV +
Sbjct: 367 SYNQTERAILVSSDAEGGSYHLYKIPPKDSNTVNTKKGTGVAAIFVGRDRFAVLDKGNNV 426
Query: 413 XXXXXNFQEKRSVRPTFSAERIY--G--GTLLAMCSNDFICFYDWAECRLIRRIDVT-VK 467
+E + + F+ + IY G GT+L S D I +D + +++ I V V+
Sbjct: 427 VIRDLENEEIKRCQIPFTIDWIYPSGSPGTILIQ-SEDKIHMFDIQQKKMLCEIQVHGVR 485
Query: 468 NLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGV-EDAFELLHETNERVR 526
+ W+ + VA T +I+ N+ + + + + GV +D ++ T+ ++
Sbjct: 486 YVIWSKDRNYVAFL--TRDFIVLANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSNHLK 543
Query: 527 TGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
L GD + Y G + +F +DR ++R+ ID V+
Sbjct: 544 YLLQNGDNGTIRTLESTI-YITGVKNNKVFAIDREF--------KNRIIEIDTTEYVLKL 594
Query: 587 TLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLES----------RGMIEEAI 636
+LL ++R + I+ + K+ + V F++ G I+ A+
Sbjct: 595 SLLQQNYNQVMTILRENRLVGKAIIAYLQKKGYPDVVHFVKDDRTRFNLALDAGNIDIAL 654
Query: 637 ---EVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMK- 692
++ D D L ++ + Q + S++ +L L + G L + +
Sbjct: 655 SSAKILDDKDCWNRLGVEALKQGNYQVVEMAYSRTSEFDRLSFLYLLVGNLSTLKKMISY 714
Query: 693 QAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLG---KLEDCLQLLVES 749
++ D D E K+ +E G + +A++ + G K E L+
Sbjct: 715 ESSDIMSRFHFSLYLGDVEERIKIL---QEAGLHQLAYITASIHGLTEKAESIGNLITSD 771
Query: 750 NRIPEAALMARSYL---PSKVS 768
+ L +SYL PS ++
Sbjct: 772 GKSQLPQLPKQSYLLVPPSPIN 793
Score = 245 (91.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 48/162 (29%), Positives = 87/162 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
FE ++ ++ HPT P++L+S I L+D+ + + F+ H V + F+
Sbjct: 5 FETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEK-FDEHEGPVRGINFHMTQ 63
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
F S D IK+WN FTL H+ + V++ + P++++ SDD ++W
Sbjct: 64 P-LFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHR--EAPWIVSSSDDMVIRIW 120
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
++Q+++C+ L GH H V + FHP+ ++++ S D T+RIW
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIW 162
Score = 189 (71.6 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 48/184 (26%), Positives = 83/184 (45%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F + W++A I +Y+Y ++ F+ H +R + H
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
T P +S DD IK+W++++ C +GH Y+ V F+ ++ S+S D I+
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQR-RCLFTLKGHKDYIRSVEFH-REAPWIVSSSDDMVIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ-TKSCVQTLEG 227
IWN S L+ H V + D +++ S D T ++WD K + T++
Sbjct: 119 IWNWQSRTCIAELNGHNHYVMSALFHPKDD--LVVSASLDQTIRIWDISGLKKKMTTVKP 176
Query: 228 HTHN 231
+ N
Sbjct: 177 YREN 180
Score = 161 (61.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 37/121 (30%), Positives = 66/121 (54%)
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDR-TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
FE + V ++F+P T + ASL +I +++ D H+ V +++
Sbjct: 5 FETKASRVKGLSFHP--TRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHM- 61
Query: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+P ++G DD+ KVW+Y+ + C+ TL+GH + +V FH E P I++ S+D +RIW
Sbjct: 62 -TQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 257 H 257
+
Sbjct: 121 N 121
Score = 104 (41.7 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + ++SV+ H PWI++S + IWN+QS+T V SA F +
Sbjct: 89 LKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDD 148
Query: 71 WVVAGADDMFIRVYNYNTMDK 91
VV+ + D IR+++ + + K
Sbjct: 149 LVVSASLDQTIRIWDISGLKK 169
Score = 40 (19.1 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPI 243
T S +Q L N +C H +PI
Sbjct: 1149 TPSDIQQLNYDERNPFVICAHSYVPI 1174
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 417 (151.9 bits), Expect = 8.6e-52, Sum P(2) = 8.6e-52
Identities = 90/257 (35%), Positives = 135/257 (52%)
Query: 14 RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVV 73
+S RVK + HP PWIL SL+SG + +W+Y+ T+ + F+ + PVR F + V
Sbjct: 8 KSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLFV 67
Query: 74 AGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 133
+G DD I+V+NY + AH DY+R VA H P++LS+SDD I++W+W+
Sbjct: 68 SGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSR-N 126
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPNFTLDAHQK 186
C + GH+HYVM F+P + + SASLD+T+++W++ +P P LD H K
Sbjct: 127 CICVLTGHNHYVMCAQFHPTE-DQIVSASLDQTVRVWDISGLRKKNVAPGPG-GLDDHLK 184
Query: 187 G-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
G D F G D K LEGH + FHP LP+I+
Sbjct: 185 GHPGATDLF----------GQADAVVK----------HVLEGHDRGFNWASFHPTLPLIV 224
Query: 246 TGSEDGTVRIWHATTYR 262
+G++D V++W Y+
Sbjct: 225 SGADDRLVKLWRMNEYK 241
Score = 356 (130.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 182/811 (22%), Positives = 335/811 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ V H P ++ + +WNY+ + + + L VR+ F
Sbjct: 46 KFDEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQRRCIFTL-LAHLDYVRTVAFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IR++N+ + + + V H Y+ C HPT ++S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
G + G + +P T+ F A D +K L+ H +G
Sbjct: 165 S-GLRKKNVAPGPGGLDDHLKGHPGATDLFGQA--DAVVK----------HVLEGHDRGF 211
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVW---DYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
N + P +++G+DD K+W +Y+ V T GH +NVS+V FHP +I+
Sbjct: 212 NWASFHP--TLPLIVSGADDRLVKLWRMNEYKAWE-VDTCRGHYNNVSSVLFHPRQDLIL 268
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ ED ++R+W T + T ER W + + G+D G ++ K+ RE P
Sbjct: 269 SNGEDRSIRVWDMTKRQCLFTFRRDNERFWILTAHPTLNLFAAGHDGGMVVFKLERERPA 328
Query: 306 ASMDNSGKIIW-AKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPN 364
++ G I++ K ++ + D+ T + + + ++ G +Y S+ +NP
Sbjct: 329 YAVH--GNILYYVKERFLRKL-------DFTTTK-DTVVMQLRP-GKSPVY--SMSYNPA 375
Query: 365 GRFVVVC---GDGEYIIYT---------ALAWRNRSFGSALEFVWSSDGEYAVREXXXXX 412
V++C + E Y + + + S + +W + +AV +
Sbjct: 376 LNAVLICTRTNNLENSTYDLCQIPKDTESQSESDSKRSSGITAIWVARNRFAVLDRNQQL 435
Query: 413 XXXXXNFQEKRSVR-PTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKNL 469
NF+ + + + PTF E Y GT +L + +F+ Y+ + I + + +
Sbjct: 436 VIK--NFKNEVTKKLPTFCEEIFYAGTGMLLIRDPEFVTLYEVQRLVSVGSIKLAKCRYV 493
Query: 470 YWADSGDLVAIASDTSFYI----LKYNRDVV-SAYLDSGKPVDEQGVEDAFELLHETNER 524
W+ LVA+ S I L+Y V + + SG DE GV ++ T+
Sbjct: 494 VWSPDMSLVALLCKHSVTICDRRLQYLCTVQENCRVKSGA-WDESGV-----FIYTTSNH 547
Query: 525 VRTGLWVGDCFIYNNSSWRL-------N--YCVGGEVTT-MFHLDRPMYLLGYLASQSRV 574
++ + GD I + N +C+ E T + H+D Y LA R
Sbjct: 548 IKYAITNGDHGIIRTLDLPIYLTRVKGNQVFCLDRECRTRVLHIDPTEYKFK-LALIQRK 606
Query: 575 YLIDKEFNVMGYTLLL--SLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMI 632
Y D+ +++ L+ S+I Y L +G E A + K+ LE G I
Sbjct: 607 Y--DEVLHMVRNARLVGQSIIAY--LQQKGYPEVALHFV----KDEKTRFGLALEC-GNI 657
Query: 633 EEAIEVATDPDYRFELAIQLGRLEVAQ---EIATEVQSESK-WKQLGELAMSTGKLEMAE 688
E A+E A D + + +LG+ + Q ++ +K + +L L + TG LE +
Sbjct: 658 EIALEAAKALDDK-DCWDRLGQSALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLK 716
Query: 689 GCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLG--KLEDCL--Q 744
K A + + ++ K G+ ++A+L G +L + L
Sbjct: 717 KMNKIAEIRKDVSAQYQGALLLGDVKERVNILKNCGQLSLAYLTAATHGFDELTESLGES 776
Query: 745 LLVESNRIPEAALMARSYLPS-KVSEIVAIW 774
+ + N +PE A+ P + ++ W
Sbjct: 777 ITSQGNSLPEVNPNAQLLQPPVPIQQLETNW 807
Score = 250 (93.1 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 55/171 (32%), Positives = 91/171 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
FE+ + ++ ++ HP P++L S +I+LWD+ + + F+ H V V F+ +
Sbjct: 5 FESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEK-FDEHDGPVRGVAFH-QQ 62
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
F S D IK+WN FTL AH V V + + P++++ SDD T ++W
Sbjct: 63 MPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHH--EYPWILSASDDQTIRIW 120
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
++Q+++C+ L GH H V FHP I++ S D TVR+W + R +N
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKN 171
Score = 209 (78.6 bits), Expect = 8.6e-52, Sum P(2) = 8.6e-52
Identities = 79/331 (23%), Positives = 145/331 (43%)
Query: 520 ETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVYLI 577
+ N RV++G W FIY S+ + Y + G+ + LD P+YL +Q V+ +
Sbjct: 524 QENCRVKSGAWDESGVFIYTTSN-HIKYAITNGDHGIIRTLDLPIYLTRVKGNQ--VFCL 580
Query: 578 DKEFNVMGYTLLLSLIEYK---TLVMRGDLERANEILPSIPKEH--HNSVARFLESRGMI 632
D+E L + EYK L+ R + +E+L + S+ +L+ +G
Sbjct: 581 DRECRTR--VLHIDPTEYKFKLALIQR----KYDEVLHMVRNARLVGQSIIAYLQQKGYP 634
Query: 633 EEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMK 692
E A+ D RF LA++ G +E+A E A + + W +LG+ A+ G ++ E C +
Sbjct: 635 EVALHFVKDEKTRFGLALECGNIEIALEAAKALDDKDCWDRLGQSALLQGNHQVVEMCYQ 694
Query: 693 QAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRI 752
+ + + E + K+ +A+ + + + +LG +++ + +L ++
Sbjct: 695 RTKNFDKLSFLYLITGNLEKLKKMNKIAEIRKDVSAQYQGALLLGDVKERVNILKNCGQL 754
Query: 753 PEAALMARSY----LPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDW---QVA 805
A L A ++ L + E + L +VNP A + L P L +W V+
Sbjct: 755 SLAYLTAATHGFDELTESLGESITSQGNSLPEVNPNA-QLLQPPVPIQQLETNWPLLSVS 813
Query: 806 LAVESKAAATR-GVHPPAEDYVN-HADKSYM 834
A TR G A +N +AD + +
Sbjct: 814 KGFFEGAMVTRAGSSATARQALNINADAALL 844
Score = 201 (75.8 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 48/167 (28%), Positives = 80/167 (47%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M +FE V+ F ++ W++ I++++Y ++ F+ H +R VA H
Sbjct: 1 MLTNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
+P +S DD IK+W++++ C H YV V F+ + SAS D+TI+
Sbjct: 61 QQMPLFVSGGDDYKIKVWNYKQR-RCIFTLLAHLDYVRTVAFH-HEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
IWN S + L H V C + D+ +++ S D T +VWD
Sbjct: 119 IWNWQSRNCICVLTGHNHYVMCAQFHPTEDQ--IVSASLDQTVRVWD 163
Score = 119 (46.9 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++ ++WDY+ + ++ + H V V FH ++P+ ++G +D +++W+
Sbjct: 21 RPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ V + + I+ D+ TI +
Sbjct: 81 KQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRI 119
Score = 61 (26.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
E + V + FHP+ P I+ G +++W YR+ L
Sbjct: 6 ESKSARVKGLSFHPKRPWILVSLHSGVIQLWD---YRMHTLL 44
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 406 (148.0 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 154/678 (22%), Positives = 285/678 (42%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + HP++P ++ V +WNY+S+ + S VR F W+++ +D
Sbjct: 56 VRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSD 115
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D IR++N+ + + + + H+ Y+ C A HP+ ++S+S D +++WD I
Sbjct: 116 DQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWD---------I 166
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP--NFTLDAHQKGVN-CVDYF 194
V+ + +D A S+ + GS D F L+ H +GVN C +
Sbjct: 167 SGLRMKNAAPVSMSLEDQLAQAHNSISNDL----FGSTDAIVKFVLEGHDRGVNWCAFHP 222
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSC--VQTLEGHTHNVSAVCFHPELPIIITGSEDGT 252
T P +++ DD K+W V T GH +NVS FHP +I++ SED T
Sbjct: 223 T---LPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKT 279
Query: 253 VRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSG 312
+R+W T +R W I +D G ++ K+ RE P ++ N
Sbjct: 280 IRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFKLERERPAHAL-NIN 338
Query: 313 KIIWAKHNEIQTVNIKSVGADYEVTDGERLPLA-VKELGTCDLYPQSLKHNPNGRFVVVC 371
+++ KS+ Y++ + +A VK LG+ L P+SL +NP + ++
Sbjct: 339 TLLYVNKE-------KSI-VSYDLLRAQSTTVASVKHLGSAWLPPRSLSYNPAEKVALLT 390
Query: 372 GDGEYIIYTALAWRNRSFGSAL---------EFVWSSDGEYAV--REXXXXXXXXXXNFQ 420
+ +Y + +RS L + ++ + +AV R N
Sbjct: 391 SSADNGVYELVNVSSRSNSLPLKDNIKGPGDDAIFVARNRFAVFSRSDQTIEIKDLSNKV 450
Query: 421 EKRSVRPTFSAERIYGG---TLLAMCSNDFICFYDWAECRLIRRIDVT-VKNLYWADSGD 476
K P + + + G LL+ + + +D + +++ + VK + W++
Sbjct: 451 TKTIQLPEKTRDIFFAGMGHVLLSTATQ--VHLFDLQQKKIVSSFNANRVKYVVWSNDNS 508
Query: 477 LVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFI 536
A+ YI+K N +++++ ++ + VE+ LL+ T + ++ L GD +
Sbjct: 509 QAALLGKHYVYIVKKNLELITSIHETIRIKSAVWVENNV-LLYATLDHLKYALMSGDTGV 567
Query: 537 YNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYK 596
L Y V + +F L+R + + + YL Y +L LI+
Sbjct: 568 IKTLESTL-YLVKAKGNMVFALNRAAEPVSFEIDPTE-YLFKLALLRKDYEQVLHLIQNS 625
Query: 597 TLVMRGDLERANEILPSIPKEHHNSVA-RFLESRGM-IEEAIEVATDPDYRFELAIQLGR 654
LV I+ + K+ + +A +F+E E A+E + + ELA + R
Sbjct: 626 NLV-------GQAIIAYLQKKGYPEIALQFVEDPSTRFELALECG-NLETALELARTIDR 677
Query: 655 LEVAQEIATEVQSESKWK 672
EV +A++ S K
Sbjct: 678 PEVWSRLASDAMSYGNHK 695
Score = 391 (142.7 bits), Expect = 7.5e-49, Sum P(2) = 7.5e-49
Identities = 84/257 (32%), Positives = 130/257 (50%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
+E+ K RS R K V HP++PWIL SL++G + +W+Y+ T+ F+ + PVR
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA 60
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + V+G DD + V+NY + + H DY+R H P++LS SDD I+
Sbjct: 61 FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
+W+W+ C I GHSHYVM F+P + + SASLD+T+++W++ +A
Sbjct: 121 IWNWQSR-NCIAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVWDISGLRMK---NAA 175
Query: 185 QKGVNCVDYFTGGDKPYL--ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
++ D + GS D K LEGH V+ FHP LP
Sbjct: 176 PVSMSLEDQLAQAHNSISNDLFGSTDAIVKF----------VLEGHDRGVNWCAFHPTLP 225
Query: 243 IIITGSEDGTVRIWHAT 259
+I++ +D V++W T
Sbjct: 226 LILSAGDDRLVKLWRMT 242
Score = 290 (107.1 bits), Expect = 8.7e-38, Sum P(2) = 8.7e-38
Identities = 57/177 (32%), Positives = 98/177 (55%)
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
M+ + FE+ + + VA HPT P++L+S + I+LWD+ G + + F+GH V +
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDR-FDGHDGPVRGI 59
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
F+P F S D + +WN S F+L H V + + P++++ SDD
Sbjct: 60 AFHPTQP-LFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHH--EYPWILSCSDD 116
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
T ++W++Q+++C+ L GH+H V FHP +I++ S D TVR+W + R++N
Sbjct: 117 QTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKN 173
Score = 208 (78.3 bits), Expect = 7.5e-49, Sum P(2) = 7.5e-49
Identities = 65/289 (22%), Positives = 134/289 (46%)
Query: 518 LHETNERVRTGLWVGDCFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVYL 576
+HET R+++ +WV + + + L Y + G+ + L+ +YL+ A + V+
Sbjct: 531 IHETI-RIKSAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVK--AKGNMVFA 587
Query: 577 IDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAI 636
+++ + + + + +K ++R D E+ ++ + +A +L+ +G E A+
Sbjct: 588 LNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIA-YLQKKGYPEIAL 646
Query: 637 EVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMD 696
+ DP RFELA++ G LE A E+A + W +L AMS G ++AE ++
Sbjct: 647 QFVEDPSTRFELALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRY 706
Query: 697 XXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAA 756
+AE + K+A +A+++ F L ++E + +L ++ P A
Sbjct: 707 FEKLSFLYLITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAY 766
Query: 757 LMARSY-LPSKVSEIVAIWRKDLQKVN-PKAAESLADPEEYSNLFD-DW 802
L A+S L K +I++ K +++ P + P + + +W
Sbjct: 767 LTAKSNGLEEKAQQILSHCNKTEEEIKLPSLGSAFTTPVPVNETYTHNW 815
Score = 39 (18.8 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 30/138 (21%), Positives = 59/138 (42%)
Query: 571 QSRVYL--IDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLES 628
Q+ +YL ++ N++ + I Y T G E+A +IL K L S
Sbjct: 741 QNSLYLNEVESRINILEQAGMYP-IAYLTAKSNGLEEKAQQILSHCNKTEEEIKLPSLGS 799
Query: 629 RGMIEEAI-EVAT------DPDYR-FELAIQLGRLEVAQEIATEVQSESKWKQLGELAMS 680
+ E T D + FE ++Q ++A E E +SE +++++ + M
Sbjct: 800 AFTTPVPVNETYTHNWPLLDTSHSTFEKSLQERMEQLAIERQEEQESEEEYEEVEQSLMD 859
Query: 681 T-GKL-EMAEGCMKQAMD 696
++ ++AE ++ +D
Sbjct: 860 VVDEMSDLAESVPEEEVD 877
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 534 (193.0 bits), Expect = 4.0e-48, P = 4.0e-48
Identities = 189/779 (24%), Positives = 345/779 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ +D HP++P ++ + +WNYQ++ + VR+ F W+++ +D
Sbjct: 54 VRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASD 113
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D IR++N+ + H Y+ C HPT + S+S D +++WD + +
Sbjct: 114 DQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWD------ISGL 167
Query: 138 FEGHSHYVMQVTFNPKDTNTFAS-ASLDRTIKIWNLGSPDP--NFTLDAHQKGVNCVDYF 194
+ HS T + +D A+ A D G+ D F L+ H +GVN V +
Sbjct: 168 RKKHS---APTTMSFEDQMARANNAQADM------FGNTDAVVKFVLEGHDRGVNWVAFH 218
Query: 195 TGGDKPYLITGSDDHTAKVWDYQ-TKSC-VQTLEGHTHNVSAVCFHPELPIIITGSEDGT 252
P +++ DD K+W TK+ V T GH N SA FHP +I++ ED T
Sbjct: 219 PS--LPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKT 276
Query: 253 VRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSG 312
+R W + ++R W I G+D G ++ K+ RE P +++ +
Sbjct: 277 IRAWDLNKRTPVQSFKRDVDRFWVIAAHPEINLFAAGHDTGVMVFKLERERPASAVYQNQ 336
Query: 313 KIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG 372
K ++KS D+ L++++LG+ + P++L +NP R V+V
Sbjct: 337 LFYITKEK-----HVKSF--DFAKNVESPSMLSLRKLGSPWVPPRTLSYNPAERAVLVTS 389
Query: 373 DGEYIIYT----------ALAWRNRSFGSALEFVWSSDGEYAV-REXXXXXXXXXXNFQE 421
+ +Y A+ + G A V+ + +AV + +
Sbjct: 390 PADGGVYELINLPRDATGAIEPTDVKRGQASSAVFVARNRFAVFSQANQQVDIKDLSNST 449
Query: 422 KRSVRPTFSAERIY-GGT--LLAMCSNDFICFYDWAECRLIRRIDVT-VKNLYWADSGDL 477
+S++P IY GGT LL + + F D + + + + V+ VK + W++ G
Sbjct: 450 TKSIKPPAGTTDIYFGGTGSLLFITPTSVVLF-DIQQKKQLAELAVSGVKYVVWSNDGLY 508
Query: 478 VAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIY 537
A+ S + I+ + VS+ ++ + + +DA LL+ T V+ L GD
Sbjct: 509 AALLSKHNVTIVTKTLEQVSSLHETIR-IKSAAWDDAGVLLYSTLNHVKYSLLNGD---- 563
Query: 538 NNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEY-- 595
G + T LD+ +YL+ + +S VY +D+ N TL + EY
Sbjct: 564 -----------NGIIRT---LDQTVYLVK-VKGRS-VYCLDR--NAKPRTLEIDPTEYRF 605
Query: 596 KTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRL 655
K +++ + + +I+ + S+ +L+ +G E A++ DP RFELA++ G L
Sbjct: 606 KLALVKRNYDEMLQIIKTSSLVGQ-SIISYLQKKGYPEIALQFVQDPQTRFELALECGNL 664
Query: 656 EVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISK 715
+VA E+A E+ + W +LG A++ G ++ E ++ + D E +S+
Sbjct: 665 DVAIEMARELDRPNLWNRLGIEALAHGNHQIVEMAYQKQRNFDKLSFLYLSIGDQEKLSR 724
Query: 716 LASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY-LPSKVSEIVAI 773
+A +A+ +G F G +ED +Q+ E + P A L A+++ L + I+ +
Sbjct: 725 MAKIAEHRGDFTSRFQNAIYRGDVEDRIQMFKEVDLYPLAYLTAKAHGLTEEAESILEV 783
Score = 420 (152.9 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 104/331 (31%), Positives = 168/331 (50%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S R K + HP PWIL SL+S T+ +W+Y+ T+ FE + PVR F +
Sbjct: 4 KFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHPTQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY T + H DY+R V HP LP++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQ 123
Query: 130 -KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
+ +CT GH+HYVM F+P + + ASASLD++++IW++ L
Sbjct: 124 NRSLICTMT--GHNHYVMCAQFHPTE-DLIASASLDQSVRIWDISG------LRKKHSAP 174
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ-TLEGHTHNVSAVCFHPELPIIITG 247
+ + D+ + +++ A ++ T + V+ LEGH V+ V FHP LP+I++
Sbjct: 175 TTMSF---EDQ---MARANNAQADMFG-NTDAVVKFVLEGHDRGVNWVAFHPSLPLIVSA 227
Query: 248 SEDGTVRIWHAT-TYRLE-NTLNYGLERVWAIGYMKSSRRIV-IGYDEGTIMVKIGREEP 304
+D +++W + T E +T + A + I+ +G D+ + + P
Sbjct: 228 GDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRAWDLNKRTP 287
Query: 305 VASMDNSGKIIW--AKHNEIQTVNIKSVGAD 333
V S W A H EI N+ + G D
Sbjct: 288 VQSFKRDVDRFWVIAAHPEI---NLFAAGHD 315
Score = 202 (76.2 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE + F ++ W++ I++++Y + FE H +R + H
Sbjct: 1 MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
PT P +S DD IK+W+++ C GH YV V F+P + SAS D+TI+
Sbjct: 61 PTQPLFVSGGDDYKIKVWNYQTR-RCLFTLNGHLDYVRTVFFHP-ELPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
IWN + T+ H V C + D + + S D + ++WD
Sbjct: 119 IWNWQNRSLICTMTGHNHYVMCAQFHPTED--LIASASLDQSVRIWD 163
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 391 (142.7 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 99/325 (30%), Positives = 159/325 (48%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
+++ K +S R K + HPS PW+L +L+S T+ +W+Y+ T+ FE E PVR
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + V+ DD I+V++ +T + H DY+R V H LP+++S+SDD I+
Sbjct: 61 FHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIR 120
Query: 125 LWDWE--KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
+W+W+ K C GH+H+VM F+P D + SASLD TI+IW++ +
Sbjct: 121 IWNWQNRKEIAC---LTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAP 176
Query: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
G + + + L+ GS + D K LEGHT V+ FHP LP
Sbjct: 177 ----GTSSFEEQMSAQQN-LLDGS------LGDCVVKFI---LEGHTRGVNWASFHPTLP 222
Query: 243 IIITGSEDGTVRIWH-ATTYRLE-NTLNYGLERVWAIGYMKSSRRIV-IGYDEGTIMVKI 299
+I++GS+D V++W + T E +T V ++ + I+ +G D+ + +
Sbjct: 223 LIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDL 282
Query: 300 GREEPVASMDNSGKIIW--AKHNEI 322
+ PV W A H I
Sbjct: 283 DKRTPVKQFKRENDRFWLIAAHPHI 307
Score = 340 (124.7 bits), Expect = 6.0e-37, Sum P(2) = 6.0e-37
Identities = 120/528 (22%), Positives = 222/528 (42%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ +D HP++P +++ T+ +W+ + + VR+ F W+++ +D
Sbjct: 56 VRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASD 115
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D IR++N+ ++ H ++ C HPT ++S+S D I++WD + +
Sbjct: 116 DQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWD------ISGL 169
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
+ HS P ++ S + + +LG F L+ H +GVN +
Sbjct: 170 RKRHSA--------PGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHP-- 219
Query: 198 DKPYLITGSDDHTAKVWDYQ-TKSC-VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
P +++GSDD K+W TK+ V T GHT+NV +V FHP +II+ ED T+R+
Sbjct: 220 TLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRV 279
Query: 256 WHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
W +R W I +D G ++ K+ RE P + + +
Sbjct: 280 WDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFF 339
Query: 316 WAKHNEIQTVNI-KSVGA-DYEVTDGERLPL-AVKELGTCDLYPQSLKHNPNGRFVVVC- 371
+IQ+ N K V + Y G P A + + L + NG+F +V
Sbjct: 340 VNAEKQIQSFNFQKRVASLPYASLKGIGQPWDAFRSISYNPSQHSVLVNEANGKFALVIL 399
Query: 372 -----GDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVREXXXXXXXXXXNFQEKRSVR 426
G E T +F FV + +V E N + + +VR
Sbjct: 400 PKQPVGAVEPTSVTQDTGNFATFVGRNRFVVYNKNTESV-EVRSLENKVTRNIKVEETVR 458
Query: 427 PTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDV-TVKNLYWADSGDLVAIASDTS 485
+A G++L + + I YD + + + ++ V VK + W+ G VA+ S +
Sbjct: 459 TIVAAGP---GSVLVIHPREVI-LYDVQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHT 514
Query: 486 FYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGD 533
+ +++++ ++ + + ++ L++ T +R L GD
Sbjct: 515 ITLATKKLELINSMHETIR-IKSAAWDETGVLIYSTLNHIRYSLLNGD 561
Score = 148 (57.2 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 49/246 (19%), Positives = 108/246 (43%)
Query: 518 LHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVY 575
+HET R+++ W IY+ + + Y + G+ + L++ +Y+ VY
Sbjct: 528 MHETI-RIKSAAWDETGVLIYSTLN-HIRYSLLNGDRGIIKTLEKTLYITK--VQGKLVY 583
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEA 635
+++E + T+ + +K ++ + ++ N ++ +L+ G E A
Sbjct: 584 CLNREGEIEILTIDPTEYRFKKALVNKNFPEVLRLIKDSNLVGQNIIS-YLQKSGYPEIA 642
Query: 636 IEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAM 695
++ DP RF+LA++ G L+VA + A ++ S W++L + A++ G +AE +
Sbjct: 643 LQFVQDPHIRFDLALEYGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAEMIYQTQH 702
Query: 696 DXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEA 755
D +SK+ ++A+ + L F ++ + E +P A
Sbjct: 703 SFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLA 762
Query: 756 ALMARS 761
+A++
Sbjct: 763 YAVAKA 768
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 355 (130.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 177/770 (22%), Positives = 316/770 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 326 YAV-HGNMLHYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + ++ E Y GT L + D I +D + R + + ++ VK
Sbjct: 434 SLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + DA +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIVICNRKL-----------------DALCNIHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFL 731
G LE MK A +S+ + K G+ ++A+L
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYL 760
Score = 347 (127.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 263 (97.6 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 194 (73.4 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 68/298 (22%), Positives = 137/298 (45%)
Query: 513 DAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLAS 570
DA +HE N RV++G W FIY S+ + Y V G+ + LD P+Y+
Sbjct: 519 DALCNIHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VK 574
Query: 571 QSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLES 628
+ VY +D+E T+ + ++K ++ + +E+L + K S+ +L+
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQK 631
Query: 629 RGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAE 688
+G E A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E
Sbjct: 632 KGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Query: 689 GCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVE 748
C ++ + + E + K+ +A+ + + + LG + + +++L
Sbjct: 692 MCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKN 751
Query: 749 SNRIPEAALMARSY-LPSKVSEIVAIW---RKDLQKVNPKAAESLADPEEYSNLFDDW 802
+ A L A ++ L + + + ++ + ++P A + L P L +W
Sbjct: 752 CGQKSLAYLSAATHGLDEEAESLKETFDPEKETIPDIDPNA-KLLQPPAPIMPLDTNW 808
Score = 190 (71.9 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 107 (42.7 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 95 (38.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 44/190 (23%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + HYV D N+ S D + GS P F +
Sbjct: 314 MI-VFKLERERPAYAVHGNMLHYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 355 (130.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 177/770 (22%), Positives = 316/770 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 326 YAV-HGNMLHYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + ++ E Y GT L + D I +D + R + + ++ VK
Sbjct: 434 SLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + DA +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIVICNRKL-----------------DALCNIHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFL 731
G LE MK A +S+ + K G+ ++A+L
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYL 760
Score = 347 (127.2 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 263 (97.6 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 194 (73.4 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 68/298 (22%), Positives = 137/298 (45%)
Query: 513 DAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLAS 570
DA +HE N RV++G W FIY S+ + Y V G+ + LD P+Y+
Sbjct: 519 DALCNIHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VK 574
Query: 571 QSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLES 628
+ VY +D+E T+ + ++K ++ + +E+L + K S+ +L+
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQK 631
Query: 629 RGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAE 688
+G E A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E
Sbjct: 632 KGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Query: 689 GCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVE 748
C ++ + + E + K+ +A+ + + + LG + + +++L
Sbjct: 692 MCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKN 751
Query: 749 SNRIPEAALMARSY-LPSKVSEIVAIW---RKDLQKVNPKAAESLADPEEYSNLFDDW 802
+ A L A ++ L + + + ++ + ++P A + L P L +W
Sbjct: 752 CGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNA-KLLQPPAPIMPLDTNW 808
Score = 190 (71.9 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 107 (42.7 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 95 (38.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 44/190 (23%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + HYV D N+ S D + GS P F +
Sbjct: 314 MI-VFKLERERPAYAVHGNMLHYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 354 (129.7 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 177/770 (22%), Positives = 316/770 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P S+ +NP
Sbjct: 326 YAV-HGNMLHYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFSMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADTQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + + I +D + R + + ++ VK
Sbjct: 434 SLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + +A +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIVICNRKL-----------------EALCNIHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFL 731
G LE MK A +S+ + K G+ ++A+L
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYL 760
Score = 347 (127.2 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 263 (97.6 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 193 (73.0 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 66/293 (22%), Positives = 135/293 (46%)
Query: 518 LHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVY 575
+HE N RV++G W FIY S+ + Y V G+ + LD P+Y+ + VY
Sbjct: 524 IHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLPIYVTR--VKGNNVY 579
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLESRGMIE 633
+D+E T+ + ++K ++ + +E+L + K S+ +L+ +G E
Sbjct: 580 CLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQKKGYPE 636
Query: 634 EAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQ 693
A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E C ++
Sbjct: 637 VALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQR 696
Query: 694 AMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIP 753
+ + E + K+ +A+ + + + LG + + +++L +
Sbjct: 697 TKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKS 756
Query: 754 EAALMARSY-LPSKVSEIVAIW---RKDLQKVNPKAAESLADPEEYSNLFDDW 802
A L A ++ L + + + ++ + ++P A + L P L +W
Sbjct: 757 LAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNA-KLLQPPAPIMPLDTNW 808
Score = 190 (71.9 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 107 (42.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 96 (38.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 44/190 (23%), Positives = 75/190 (39%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + HYV D N+ S D + GS P F++
Sbjct: 314 MI-VFKLERERPAYAVHGNMLHYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFSM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 37 (18.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 350 (128.3 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 176/770 (22%), Positives = 316/770 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 326 YAV-HGNMLHYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + + I +D + R + + ++ VK
Sbjct: 434 SLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + +A +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIVICNRKL-----------------EALCNIHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFL 731
G LE MK A +S+ + K G+ ++A+L
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYL 760
Score = 347 (127.2 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 263 (97.6 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 193 (73.0 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 66/293 (22%), Positives = 135/293 (46%)
Query: 518 LHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVY 575
+HE N RV++G W FIY S+ + Y V G+ + LD P+Y+ + VY
Sbjct: 524 IHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLPIYVTR--VKGNNVY 579
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLESRGMIE 633
+D+E T+ + ++K ++ + +E+L + K S+ +L+ +G E
Sbjct: 580 CLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQKKGYPE 636
Query: 634 EAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQ 693
A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E C ++
Sbjct: 637 VALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQR 696
Query: 694 AMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIP 753
+ + E + K+ +A+ + + + LG + + +++L +
Sbjct: 697 TKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKS 756
Query: 754 EAALMARSY-LPSKVSEIVAIW---RKDLQKVNPKAAESLADPEEYSNLFDDW 802
A L A ++ L + + + ++ + ++P A + L P L +W
Sbjct: 757 LAYLTAATHGLDEEAENLKETFDPEKETIPDIDPNA-KLLQPPAPIMPLDTNW 808
Score = 190 (71.9 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 107 (42.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 95 (38.5 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 44/190 (23%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + HYV D N+ S D + GS P F +
Sbjct: 314 MI-VFKLERERPAYAVHGNMLHYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 37 (18.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 360 (131.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 179/770 (23%), Positives = 316/770 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HPT V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 326 YAV-HGNMLHYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + D I +D + R + + ++ VK
Sbjct: 434 SLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + DA +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIVICNRKL-----------------DALCNIHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFL 731
G LE MK A +S+ + K G+ ++A+L
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYL 760
Score = 346 (126.9 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 262 (97.3 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 194 (73.4 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 68/298 (22%), Positives = 137/298 (45%)
Query: 513 DAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLAS 570
DA +HE N RV++G W FIY S+ + Y V G+ + LD P+Y+
Sbjct: 519 DALCNIHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VK 574
Query: 571 QSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLES 628
+ VY +D+E T+ + ++K ++ + +E+L + K S+ +L+
Sbjct: 575 GNNVYCLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQK 631
Query: 629 RGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAE 688
+G E A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E
Sbjct: 632 KGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVE 691
Query: 689 GCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVE 748
C ++ + + E + K+ +A+ + + + LG + + +++L
Sbjct: 692 MCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKN 751
Query: 749 SNRIPEAALMARSY-LPSKVSEIVAIW---RKDLQKVNPKAAESLADPEEYSNLFDDW 802
+ A L A ++ L + + + ++ + ++P A + L P L +W
Sbjct: 752 CGQKSLAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNA-KLLQPPAPIMPLDTNW 808
Score = 188 (71.2 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPTED--LVVSASLDQTVRVWD 163
Score = 107 (42.7 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 95 (38.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 44/190 (23%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + HYV D N+ S D + GS P F +
Sbjct: 314 MI-VFKLERERPAYAVHGNMLHYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 350 (128.3 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 179/775 (23%), Positives = 318/775 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 326 YAV-HGNMLYYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + D I +D + R + + ++ VK
Sbjct: 434 SILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + S L + +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIMICNRKLES--LCN---------------IHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFML 736
G LE MK A +++ + + G+NN + FML
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQNNKGYA--FML 763
Score = 347 (127.2 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 263 (97.6 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 190 (71.9 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 185 (70.2 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 56/233 (24%), Positives = 112/233 (48%)
Query: 518 LHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVY 575
+HE N RV++G W FIY S+ + Y V G+ + LD P+Y+ + VY
Sbjct: 524 IHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVY 579
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLESRGMIE 633
+D+E T+ + ++K ++ + +E+L + K S+ +L+ +G E
Sbjct: 580 CLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQKKGYPE 636
Query: 634 EAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQ 693
A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E C ++
Sbjct: 637 VALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQR 696
Query: 694 AMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLL 746
+ + E + K+ +A+ + + + LG + + +++L
Sbjct: 697 TKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRIL 749
Score = 107 (42.7 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 89 (36.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 43/190 (22%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + +YV D N+ S D + GS P F +
Sbjct: 314 MI-VFKLERERPAYAVHGNMLYYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 38 (18.4 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 216 YQTKSCVQTLEGHTH 230
YQ C+ T+ G+ H
Sbjct: 880 YQALPCLPTMYGYPH 894
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 353 (129.3 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 179/781 (22%), Positives = 320/781 (40%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 165 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 207
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 208 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 266 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 325
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 326 YAV-HGNMLYYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 373
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 374 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 433
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + D I +D + R + + ++ VK
Sbjct: 434 SILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQKRTLASVKISKVKY 493
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + S L + +HE N RV++G
Sbjct: 494 VIW--SADMSHVALLAKHAIMICNRKLES--LCN---------------IHE-NIRVKSG 533
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 534 AWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 590
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 591 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 650
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 651 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLIT 710
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLED 741
G LE MK A +++ + + G++N CL + + E
Sbjct: 711 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQSNSELTCLSLALEGEF 770
Query: 742 C 742
C
Sbjct: 771 C 771
Score = 347 (127.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 70/204 (34%), Positives = 114/204 (55%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK--PYLITGSD 207
+G+ VD F D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 263 (97.6 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
VW++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 190 (71.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++ + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+WN S L H V C + D +++ S D T +VWD
Sbjct: 119 VWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 185 (70.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 56/233 (24%), Positives = 112/233 (48%)
Query: 518 LHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVY 575
+HE N RV++G W FIY S+ + Y V G+ + LD P+Y+ + VY
Sbjct: 524 IHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLPIYVTR--VKGNNVY 579
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLESRGMIE 633
+D+E T+ + ++K ++ + +E+L + K S+ +L+ +G E
Sbjct: 580 CLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQKKGYPE 636
Query: 634 EAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQ 693
A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E C ++
Sbjct: 637 VALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQR 696
Query: 694 AMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLL 746
+ + E + K+ +A+ + + + LG + + +++L
Sbjct: 697 TKNFDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRIL 749
Score = 107 (42.7 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+++T + ++WDY+ + + + H V + FH + P+ ++G +D +++W+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 81 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 119
Score = 89 (36.4 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 43/190 (22%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 197 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 253
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 254 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 313
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + +YV D N+ S D + GS P F +
Sbjct: 314 MI-VFKLERERPAYAVHGNMLYYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 368
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 369 -SYNPAENAV 377
Score = 66 (28.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
E + V + FHP+ P I+T +G +++W L + + V I + K
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 286 IVIGYDEGTIMV 297
V G D+ I V
Sbjct: 66 FVSGGDDYKIKV 77
Score = 38 (18.4 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 216 YQTKSCVQTLEGHTH 230
YQ C+ T+ G+ H
Sbjct: 915 YQALPCLPTMYGYPH 929
Score = 37 (18.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 439 LLAMCSNDFICFYDWAECRLIRRID 463
+L N I +D+ C LI + D
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFD 48
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 350 (128.3 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 176/770 (22%), Positives = 316/770 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 36 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 94
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IRV+N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 95 YPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 154
Query: 129 EKGWMCTQIFEGHSHY-VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + G V +T + F + D +K L+ H +G
Sbjct: 155 S-GLRKKNLSPGAVESDVRGIT----GVDLFGTT--DAVVK----------HVLEGHDRG 197
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ V T GH +NVS FHP +I+
Sbjct: 198 VNWAAFHP--TMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 255
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W + + G+D G I+ K+ RE P
Sbjct: 256 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPA 315
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D +AV +L + +P ++ +NP
Sbjct: 316 YAV-HGNMLHYVKDRFLRQLDFNS-SKD----------VAVMQLRSGSKFPVFNMSYNPA 363
Query: 365 GRFVVVCG------DGEYIIYTA---LAWRNRSF-----GSALEFVWSSDGEYAVREXXX 410
V++C + Y +YT +N S L VW + +AV +
Sbjct: 364 ENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 423
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + + I +D + R + + ++ VK
Sbjct: 424 SLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVKY 483
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D+ +A I+ NR + +A +HE N RV++G
Sbjct: 484 VIW--SADMSHVALLAKHAIVICNRKL-----------------EALCNIHE-NIRVKSG 523
Query: 529 LW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W FIY S+ + Y V G+ + LD P+Y+ + VY +D+E
Sbjct: 524 AWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLPIYVTR--VKGNNVYCLDRECRPRVL 580
Query: 587 TL-------LLSLIEYK---TLVMRGDLERANE-ILPSIPKEHHNSVA-RFLESR----- 629
T+ L+LI K L M + + + I+ + K+ + VA F++
Sbjct: 581 TIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFS 640
Query: 630 -----GMIEEAIEVATDPDYR--FELAIQLGRLEVAQEIATEVQSESK-WKQLGELAMST 681
G IE A+E A D + +E ++ L+ +I +K + +L L + T
Sbjct: 641 LALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLIT 700
Query: 682 GKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFL 731
G LE MK A +S+ + K G+ ++A+L
Sbjct: 701 GNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYL 750
Score = 316 (116.3 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 65/196 (33%), Positives = 108/196 (55%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+K + HP PWIL+SL++G + +W T+ F+ + PVR F ++ V+G D
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V+NY + H DYIR H P++LS+SDD I++W+W+ C +
Sbjct: 62 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSR-TCVCV 120
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQKGVNCVDY 193
GH+HYVM F+P + + SASLD+T+++W++ G N + +++ +G+ VD
Sbjct: 121 LTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 179
Query: 194 FTGGDK--PYLITGSD 207
F D +++ G D
Sbjct: 180 FGTTDAVVKHVLEGHD 195
Score = 253 (94.1 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 57/166 (34%), Positives = 89/166 (53%)
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNPKDTNTFA 159
++ ++ HP P++LSS + +I+LW GW CT I F+ H V + F+ K F
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWT--TGW-CTLIDKFDEHDGPVRGIDFH-KQQPLFV 57
Query: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
S D IK+WN FTL H + F + P++++ SDD T +VW++Q++
Sbjct: 58 SGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIRVWNWQSR 115
Query: 220 SCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
+CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 116 TCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 161
Score = 193 (73.0 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 66/293 (22%), Positives = 135/293 (46%)
Query: 518 LHETNERVRTGLW-VGDCFIYNNSSWRLNYCVG-GEVTTMFHLDRPMYLLGYLASQSRVY 575
+HE N RV++G W FIY S+ + Y V G+ + LD P+Y+ + VY
Sbjct: 514 IHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLPIYVTR--VKGNNVY 569
Query: 576 LIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHHNSVARFLESRGMIE 633
+D+E T+ + ++K ++ + +E+L + K S+ +L+ +G E
Sbjct: 570 CLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVGQSIIAYLQKKGYPE 626
Query: 634 EAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQ 693
A+ D RF LA++ G +E+A E A + ++ W++LGE+A+ G ++ E C ++
Sbjct: 627 VALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQR 686
Query: 694 AMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIP 753
+ + E + K+ +A+ + + + LG + + +++L +
Sbjct: 687 TKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKS 746
Query: 754 EAALMARSY-LPSKVSEIVAIW---RKDLQKVNPKAAESLADPEEYSNLFDDW 802
A L A ++ L + + + ++ + ++P A + L P L +W
Sbjct: 747 LAYLTAATHGLDEEAESLKETFDPEKETIPDIDPNA-KLLQPPAPIMPLDTNW 798
Score = 95 (38.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 44/190 (23%), Positives = 74/190 (38%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VR 61
+K L V HP+ P I++ V IW +K++EV V
Sbjct: 187 VKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE---SKAWEVDTCRGHYNNVS 243
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
A F R++ +++ ++D IRV++ + V+ F D +A HP L + D
Sbjct: 244 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGG 303
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+I ++ E+ + HYV D N+ S D + GS P F +
Sbjct: 304 MI-VFKLERERPAYAVHGNMLHYVKDRFLRQLDFNS----SKDVAVMQLRSGSKFPVFNM 358
Query: 182 DAHQKGVNCV 191
++ N V
Sbjct: 359 -SYNPAENAV 367
Score = 83 (34.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 19/99 (19%), Positives = 45/99 (45%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P++++ + ++W + + + H V + FH + P+ ++G +D +++W+
Sbjct: 11 RPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 70
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
R TL L+ + + I+ D+ TI V
Sbjct: 71 KLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRV 109
Score = 56 (24.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIM 296
FHP+ P I++ +G +++W L + + V I + K V G D+ I
Sbjct: 7 FHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIK 66
Query: 297 V 297
V
Sbjct: 67 V 67
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 430 (156.4 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 174/820 (21%), Positives = 342/820 (41%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVAR 68
K + V+ +D H +P ++ + +WNY+ + + + L +R+ F
Sbjct: 46 KFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTL-LGHLDYIRTTFFHHE 104
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
W+++ +DD IR++N+ + V V H Y+ C HP+ V+S+S D +++WD
Sbjct: 105 YPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQKG 187
G + G DT + +D ++ L+ H +G
Sbjct: 165 S-GLRKKNLSPG-----------AVDTEVRGISGVD----LFGASDAVVKHVLEQGHDRG 208
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC-VQTLEGHTHNVSAVCFHPELPIII 245
VN + P +++G+DD K+W ++K+ + T GH +NVS FHP +I+
Sbjct: 209 VNWAAFHPS--MPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQELIL 266
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
+ SED ++R+W + T +R W +G + G+D G ++ K+ RE P
Sbjct: 267 SNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAHPNLNLFAAGHDSGMLVFKLERERPA 326
Query: 306 ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ-SLKHNPN 364
++ + + + K ++ ++ S D AV +L + +P S+ +NP
Sbjct: 327 YAVYGN-MLYYVKDRFLRQLDFNS-SKD----------TAVMQLRSGSKFPVFSMSYNPA 374
Query: 365 GRFVVVCG------DGEYIIYTALAWRNRSF--------GSALEFVWSSDGEYAVREXXX 410
V++C + Y +Y+ + S L VW + +AV +
Sbjct: 375 ENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMH 434
Query: 411 XXXXXXXNFQEKRSVRPTFSAERIYGGT-LLAMCSNDFICFYDWAECRLIRRIDVT-VKN 468
+ + V+ E Y GT L + + + +D + R + + + VK
Sbjct: 435 SLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQKRSLATVKIAKVKY 494
Query: 469 LYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
+ W S D + K+ + + L+S +HE N RV++G
Sbjct: 495 VVW--SSD----CQPREPLLAKHAIMICNKKLES------------LCNIHE-NIRVKSG 535
Query: 529 LWV-GDCFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGY 586
W + FIY S+ + Y + G+ + LD P+Y+ + VY +D+E
Sbjct: 536 AWAENEVFIYTTSN-HIKYALTSGDHGIIRTLDLPIYVTRVRGNS--VYCLDRECRPRVL 592
Query: 587 TLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRF 646
+ + +K ++ E ++ + K S+ +L+ +G E A+ D RF
Sbjct: 593 DIDPTEYRFKLALVNRKYEEVLHMVRNA-KLVGQSIIAYLQKKGYPEVALHFVKDEKTRF 651
Query: 647 ELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXX 706
LA++ G +EVA E A + S W++LGE A+ G ++ E C ++ +
Sbjct: 652 SLALECGNIEVALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLI 711
Query: 707 XXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSK 766
+ + K+ +A+ + + + LG + + +++L + A L A ++ +
Sbjct: 712 TGNLTKLRKMMKIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDE 771
Query: 767 VSEIVA----IWRKDLQKVNPKAAESLADPEEYSNLFDDW 802
+E + + ++ + +V+P A + L P + L +W
Sbjct: 772 EAEALKETFDLEKEMVPEVDPNA-QLLQPPPPINPLDTNW 810
Score = 359 (131.4 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 70/193 (36%), Positives = 110/193 (56%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +D
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVDTEV 181
Query: 186 KGVNCVDYFTGGD 198
+G++ VD F D
Sbjct: 182 RGISGVDLFGASD 194
Score = 262 (97.3 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 57/173 (32%), Positives = 93/173 (53%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNP 152
FE + ++ ++ HP P++L+S + +I+LWD+ MCT I F+ H V + F+
Sbjct: 5 FETKSARVKGLSFHPKRPWILASLHNGVIQLWDYR---MCTLIDKFDEHDGPVRGIDFH- 60
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S D IK+WN FTL H + F + P++++ SDD T +
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIR 118
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
+W++Q+++CV L GH H V FHP ++++ S D TVR+W + R +N
Sbjct: 119 IWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKN 171
Score = 195 (73.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 48/167 (28%), Positives = 76/167 (45%)
Query: 49 MAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH 108
M FE V+ F ++ W++A + I++++Y + F+ H +R + H
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
P +S DD IK+W++ K C GH Y+ + TF + SAS D+TI+
Sbjct: 61 KQQPLFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIR 118
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
IWN S L H V C + D +++ S D T +VWD
Sbjct: 119 IWNWQSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 421 (153.3 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 169/811 (20%), Positives = 340/811 (41%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+SVD HP++P ++ T+ +W+ ++ + +R F W+++ +D
Sbjct: 56 VRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSD 115
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D IR++N+ ++ H Y+ HP+ ++S+S D +++WD + +
Sbjct: 116 DQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWD------ISGL 169
Query: 138 FEGHSHYVMQV-TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
+ HS V F + L + N+ + + L+ H KGVN +
Sbjct: 170 RKKHSAPTSSVRAFEDQ----LQRQQLPQQDIFGNINAV-VKYVLEGHDKGVNYASFHP- 223
Query: 197 GDKPYLITGSDDHTAKVWDYQ-TKSC-VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
P +++ DD K+W TK+ V T GHT NV + FHP +I++ S+D T+R
Sbjct: 224 -TLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIR 282
Query: 255 IWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKI 314
+W +R W I + +D G ++ K+ RE P ++ + K+
Sbjct: 283 VWDLNKRVPVKQFRREHDRFWLIASHPTISLFAACHDSGIMVFKLERERPAHTIFQN-KL 341
Query: 315 IWAK-HNEIQTVNIKSVGADYEVTDGERLP-LAVKELGTCDLYPQSLKHNPNGRFV-VVC 371
+ +IQT +I LP L++K++G + ++L +N + V VV
Sbjct: 342 YYVNGEKQIQTFDINK--------QENSLPMLSLKKIGKTWSFMRTLSYNQSDNSVLVVH 393
Query: 372 GDGEYIIYTALAWRNRSFGSALEFVWSSDGE-----YAVREXXXXXXXXXXNFQEK---R 423
G+G+ Y + G A+E GE + R Q K
Sbjct: 394 GEGDNGNYALITLPKHVTG-AIEPTDIRQGEANFAAFISRNRFVTFVKSTKTLQVKDLNN 452
Query: 424 SVRPTFSAER-----IYG--GTLLAMCSNDFICFYDWAECRLIRRIDVT-VKNLYWADSG 475
++ T + + G G +L + ++ I YD + + + I V VK + W+ +G
Sbjct: 453 NITKTVQLDSSIVDVLPGSPGRILLVKAHSVIN-YDVQQRKELAEISVNNVKYVSWSSNG 511
Query: 476 DLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCF 535
+A+ S + I + ++++ ++ + + +D LL+ T ++ L GD
Sbjct: 512 QYLALLSKHTITIADKDLKLITSMHETIR-IKSAAWDDTGVLLYSTLNHIKYTLLNGD-- 568
Query: 536 IYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEY 595
G + T L+ +Y+ + +Y ++++ V T+ + +
Sbjct: 569 -------------NGIIKT---LENTLYITK--VQGNLIYCLNRQGQVETITIDPTEYRF 610
Query: 596 KTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRL 655
K ++ + ++ + N + +L+ +G E A+ DP+ RFELA++ L
Sbjct: 611 KRALVNKNFGEVLRLIKNSTLVGQNIIG-YLQKKGFPEVALHFVQDPETRFELALECSNL 669
Query: 656 EVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISK 715
+VA E A + + W++LGE A+ G +E+ E +Q D E + K
Sbjct: 670 QVALEQAKILNNNQIWEKLGEEALLQGNIEIVEYIYQQLHHFDKLSFLYLYKGDDERLDK 729
Query: 716 LASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY----LPSKVSEIV 771
++++A+ + + ++ Q+ +++ +P A +A+S L ++ +
Sbjct: 730 MSTIAQHRDDTSSLVQNTLYNNDIKKRCQVYIQNGMLPLAYTLAKSNGLNELAEQILQEA 789
Query: 772 AIWRKDLQKVNPKAAESLADPEEYSNLFDDW 802
I KD++ P+ + + P+ +W
Sbjct: 790 NISEKDVEL--PELGDVVPLPKPIGEPVGNW 818
Score = 382 (139.5 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 81/252 (32%), Positives = 128/252 (50%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
+++ K +S R K V HP PW L SL+S T+ +W+Y+ T+ FE PVRS
Sbjct: 1 MKMLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVD 60
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + V+G DD I+V++ NT + H DYIR V+ H LP+++S SDD I+
Sbjct: 61 FHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIR 120
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
+W+W+ + GH+HYVM F+P + + SASLD+T+++W++ H
Sbjct: 121 IWNWQNRQEIACL-TGHNHYVMSAQFHPSE-DLIVSASLDQTVRVWDISG-----LRKKH 173
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
+ V F + + D ++ LEGH V+ FHP LP+I
Sbjct: 174 SAPTSSVRAFEDQLQRQQLPQQD-----IFGNINAVVKYVLEGHDKGVNYASFHPTLPLI 228
Query: 245 ITGSEDGTVRIW 256
++ +D V++W
Sbjct: 229 VSAGDDRVVKLW 240
Score = 272 (100.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 60/178 (33%), Positives = 94/178 (52%)
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
M + FE+ + + VA HP P+ L S I+LWD+ G + + FE H V V
Sbjct: 1 MKMLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDR-FEDHVGPVRSV 59
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
F+P F S D TIK+W+L + FTL+ H + V + D P++I+ SDD
Sbjct: 60 DFHPTQP-LFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHH--DLPWIISCSDD 116
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENT 266
T ++W++Q + + L GH H V + FHP +I++ S D TVR+W + R +++
Sbjct: 117 QTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHS 174
Score = 140 (54.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+P+ + T ++WDY+ + + E H V +V FHP P+ ++G +D T+++W
Sbjct: 23 RPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSL 82
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
T + TLN L+ + + + I+ D+ TI +
Sbjct: 83 NTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRI 121
>UNIPROTKB|H0Y938 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR006692 Pfam:PF04053
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 GO:GO:0005198
HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933 Ensembl:ENST00000512309
Bgee:H0Y938 Uniprot:H0Y938
Length = 177
Score = 394 (143.8 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 79/154 (51%), Positives = 106/154 (68%)
Query: 379 YTALAWRNRSFGSALEFVWSSDG-EYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGG 437
YTA+A RN+SFGSA EF W+ D EYA+RE NF+EK+S +P F AE IYGG
Sbjct: 1 YTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFK-NFKEKKSFKPDFGAESIYGG 59
Query: 438 TLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVS 497
LL + S + + FYDW LIRRI++ K+++W+DSG+LV IA++ SF+ILKY + V
Sbjct: 60 FLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVL 119
Query: 498 AYLDSGKPVDEQGVEDAFELLHETNERVRTGLWV 531
A ++ + V E G+EDAFE+L E E V+TGLWV
Sbjct: 120 AAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWV 153
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 379 (138.5 bits), Expect = 4.6e-31, P = 4.6e-31
Identities = 88/290 (30%), Positives = 153/290 (52%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+++ L S+ V+SV P + +S T+ +WN + + +S E V+S F
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ + +G++ ++++N T + ++ E H+ +R VA P + SSS D IKL
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKL 986
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
W+ G + Q F+GH ++ V F+P D S S D TIK+W+L + + +L+ H
Sbjct: 987 WNSTTGEL-QQTFKGHDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+ V+ V F+ DK L + S D T K+WD T +TLEGH+ V +V F P+ ++
Sbjct: 1045 RSVHAVA-FSPDDKQ-LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
+ S DGT+++W+ T L+ TL + V ++ + +++ GY + TI
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTI 1152
Score = 356 (130.4 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 91/303 (30%), Positives = 156/303 (51%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+SV P +++ Y TV IW+ + + ++ + V S F + + +G+
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I +++ T + ++ FE H I VA P + S+SDD IK+WD G + Q
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGEL-QQT 871
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
+ HS V V F+P D AS+SLD TIK+WN + + +L+ V V + G
Sbjct: 872 LDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
K L +GS+ +T K+W+ T +QTLEGH+ +V +V F P+ + + S D T+++W+
Sbjct: 931 KK--LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN 988
Query: 258 ATTYRLENTLNYGLERVW--AIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKI 314
+TT L+ T G + +W A+ + + +V G D+ TI + + E S+++ +
Sbjct: 989 STTGELQQTFK-GHD-LWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRS 1046
Query: 315 IWA 317
+ A
Sbjct: 1047 VHA 1049
Score = 355 (130.0 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 91/292 (31%), Positives = 145/292 (49%)
Query: 2 PLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVR 61
P E+++ L RS VKSV P + + TV +WN + + ++ E VR
Sbjct: 905 PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVR 964
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
S F + + + + D I+++N T + + F+ H +IR VA P +++S SDD
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDN 1024
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IKLWD + Q E HS V V F+P D AS+SLD TIK+W+ + + TL
Sbjct: 1025 TIKLWDLATSEL-QQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGELQRTL 1082
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
+ H +GV V + G L + S D T K+W+ T QTL G + V +V F P+
Sbjct: 1083 EGHSQGVRSVTFSPDGK--LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDG 1140
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDE 292
+ +G D T+++W + T L TL +R+ ++ + + + G YD+
Sbjct: 1141 KQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQ 1192
Score = 325 (119.5 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 80/294 (27%), Positives = 143/294 (48%)
Query: 2 PLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVR 61
P E+ + L S V+S+ P + + Y T+ +W+ + + ++FE +
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIW 838
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
S F + + + +DD I++++ T + + ++H+ +R VA P + SSS D
Sbjct: 839 SVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS 898
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ G + Q EG S +V V F+P D AS S T+K+WN + + TL
Sbjct: 899 TIKVWNPATGEL-QQSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPATGELLQTL 956
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
+ H + V V + G + L + S D T K+W+ T QT +GH + AV F P+
Sbjct: 957 EGHSQSVRSVAFSPDGKQ--LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
+++GS+D T+++W T L+ +L V A+ + +++ + TI
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTI 1068
Score = 322 (118.4 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 79/276 (28%), Positives = 136/276 (49%)
Query: 20 SVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDM 79
SV P + ++ T+ IW+ + + ++ + VRS F + + + + D
Sbjct: 839 SVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS 898
Query: 80 FIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFE 139
I+V+N T + + E + +++ VA P + S S+ +KLW+ G + Q E
Sbjct: 899 TIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELL-QTLE 957
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GHS V V F+P D AS+S D TIK+WN + + T H + V + G
Sbjct: 958 GHSQSVRSVAFSP-DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGK- 1015
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
+L++GSDD+T K+WD T Q+LE H+ +V AV F P+ + + S D T+++W +
Sbjct: 1016 -HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 260 TYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
T L+ TL + V ++ + + + +GTI
Sbjct: 1075 TGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTI 1110
Score = 308 (113.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 79/254 (31%), Positives = 126/254 (49%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ + QT+ PV S F + +V+G+ D +++++ T + ++ + H+
Sbjct: 739 WSAEQQTLENHLG----PVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT 794
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ +A P + S S D I LWD G + Q FEGH H + V F P D ASA
Sbjct: 795 VESLAFSPDGKLLASGSYDNTIDLWDSATGELL-QTFEGHPHSIWSVAFAP-DGKELASA 852
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
S D TIKIW+L + + TLD+H + V V + G L + S D T KVW+ T
Sbjct: 853 SDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGK--LLASSSLDSTIKVWNPATGEL 910
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
Q+LEG + V +V F P+ + +GSE TV++W+ T L TL + V ++ +
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 282 SSRRIVIGYDEGTI 295
+++ + TI
Sbjct: 971 DGKQLASSSSDTTI 984
Score = 279 (103.3 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 72/269 (26%), Positives = 126/269 (46%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+++V P +++ T+ +W+ + + +S E V + F + + + +
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I++++ T + + E H+ +R V P + S+S D IKLW+ G + Q
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGEL-QQT 1123
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
G S +V V F+P D AS D TIK+W+ + + TL+ H + V + G
Sbjct: 1124 LTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDG 1182
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
L +GS D TAK+WD T +Q EGH+ V +V F P+ ++ + S T+++W
Sbjct: 1183 K--LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRI 286
T L TLN E ++ + R+
Sbjct: 1241 PVTGELLQTLNDPDESAGSVAFSPDGNRL 1269
Score = 250 (93.1 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 66/224 (29%), Positives = 110/224 (49%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E++R L S+ V+SV P + ++ Y GT+ +WN + + ++ V S F
Sbjct: 1077 ELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAF 1136
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ + +G D I++++ T + ++ E H+D I+ V P + S S D KL
Sbjct: 1137 SPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKL 1196
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
WD G + QIFEGHS +V V F+P D AS+S TIK+W+ + + TL+
Sbjct: 1197 WDPATGELL-QIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLWDPVTGELLQTLNDPD 1254
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
+ V + G++ + D K+WD T +Q L+GH+
Sbjct: 1255 ESAGSVAFSPDGNR---LASVDIFDTKIWDPATGELLQALKGHS 1295
Score = 220 (82.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 53/170 (31%), Positives = 83/170 (48%)
Query: 129 EKGWMCTQ-IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E+ W Q E H V V F+P D S S D T+KIW+ + + TLD H
Sbjct: 736 EQTWSAEQQTLENHLGPVESVVFSP-DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT 794
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + G L +GS D+T +WD T +QT EGH H++ +V F P+ + +
Sbjct: 795 VESLAFSPDGK--LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASA 852
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S+D T++IW T L+ TL+ + V ++ + + + + TI V
Sbjct: 853 SDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV 902
Score = 169 (64.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 50/187 (26%), Positives = 87/187 (46%)
Query: 2 PLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVR 61
PL E+++ L RS+ V SV P + + Y T+ +W+ + + ++ E ++
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQ 1174
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
S F + + +G+ D ++++ T + +++FE H+ ++ VA P + SSS
Sbjct: 1175 SVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGE 1234
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IKLWD G + Q V F+P D N AS + T KIW+ + + L
Sbjct: 1235 TIKLWDPVTGELL-QTLNDPDESAGSVAFSP-DGNRLASVDIFDT-KIWDPATGELLQAL 1291
Query: 182 DAHQKGV 188
H K V
Sbjct: 1292 KGHSKWV 1298
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 364 (133.2 bits), Expect = 4.3e-28, Sum P(4) = 4.3e-28
Identities = 98/311 (31%), Positives = 153/311 (49%)
Query: 7 IKRKLAQRSERVKSVDL-HPSEPWILASLYS-GTVCIWNYQSQTMAKSFEVTELPVRSAK 64
++ L +E VKSV H S +LAS GTV IW+ + T+ + + VRS
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSR--LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVV 354
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + + +G++D +R++ T FE H D + V+ + S+SD +K
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVK 414
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
+WD G + + EGH V V+F+P D+ ASAS DRT+KIW+ + TL+ H
Sbjct: 415 IWDTRTGSL-QNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQRTLEGH 472
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
V V + D + + SDD T K+WD T LE H + V +V F + ++
Sbjct: 473 NDWVRSVVF--SHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLL 530
Query: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
+ S+D TV+IW T LENTL +RV ++ + SR + D+GT+ +
Sbjct: 531 ASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGT 590
Query: 305 VA-SMDNSGKI 314
V + D SG++
Sbjct: 591 VQHTFDGSGRV 601
Score = 360 (131.8 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
Identities = 87/292 (29%), Positives = 147/292 (50%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R L ++ V+SV I + TV IW + + +FE E V + F
Sbjct: 339 LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFA 398
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + +D +++++ T V E H D + V+ P + S+SDD +K+W
Sbjct: 399 HDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIW 458
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
G + + EGH+ +V V F+ D+ ASAS D T+KIW+ + L++H
Sbjct: 459 HAATGSL-QRTLEGHNDWVRSVVFS-HDSRLIASASDDMTVKIWDTATVPLQNNLESHDN 516
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V V + D L + SDD T K+WD T S TLEGH V++V F P+ ++ +
Sbjct: 517 WVRSVVF--SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLAS 574
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVW-AIGYMKSSRRIVIGYDEGTIMV 297
S+DGTV+IW+A T +++T + G RV ++ + +S + D+GT+ +
Sbjct: 575 ASDDGTVKIWYAATGTVQHTFD-GSGRVAISLAFSHTSNLLASAMDDGTVKI 625
Score = 302 (111.4 bits), Expect = 2.4e-21, Sum P(4) = 2.4e-21
Identities = 88/296 (29%), Positives = 140/296 (47%)
Query: 18 VKSVDL-HPSEPWILASLYS-GTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
V SV H S +LAS GTV IW+ + + + E V+S F + + +
Sbjct: 266 VGSVSFSHDSR--LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASA 323
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+DD +++++ T ++ + H D +R V + S S+D +++W+ G +
Sbjct: 324 SDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG-LLR 382
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
FE H VM V+F D+ ASAS +KIW+ + L+ H VN V +
Sbjct: 383 HTFEDHEDSVMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSF-- 439
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
D L + SDD T K+W T S +TLEGH V +V F + +I + S+D TV+I
Sbjct: 440 SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Query: 256 WHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNS 311
W T L+N L V ++ + SR + D+ T VKI + S++N+
Sbjct: 500 WDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMT--VKIW-DTATGSLENT 552
Score = 300 (110.7 bits), Expect = 4.0e-21, Sum P(4) = 4.0e-21
Identities = 81/296 (27%), Positives = 144/296 (48%)
Query: 7 IKRKLAQRSERVKSVDL-HPSEPWILASLYSGTVC--IWNYQSQTMAK--SFEVTELPVR 61
++R + +RS + +D+ S + L ++ SG C + Y S + F+ + V
Sbjct: 209 LERFIRKRSSDIDLLDVVEDSYRFALWNI-SGIKCAPLQVYASALLFSPAQFKGHDRAVG 267
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
S F + + + + D +++++ T E H ++++ V + S+SDD
Sbjct: 268 SVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDG 327
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
+K+WD G + ++ +GH+ V V F+ D+ AS S DRT++IW + T
Sbjct: 328 TVKIWDTATGTL-QRMLKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWETTTGLLRHTF 385
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
+ H+ V V + D L + SD K+WD +T S LEGH V++V F P+
Sbjct: 386 EDHEDSVMAVSF--AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++ + S+D TV+IWHA T L+ TL + V ++ + SR I D+ T+ +
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Score = 291 (107.5 bits), Expect = 3.7e-20, Sum P(4) = 3.7e-20
Identities = 74/271 (27%), Positives = 128/271 (47%)
Query: 7 IKRKLAQRSERVKSVDL-HPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
++ + V +V H S AS G V IW+ ++ ++ E + V S F
Sbjct: 381 LRHTFEDHEDSVMAVSFAHDSRRLASAS-DGGNVKIWDTRTGSLQNVLEGHDDCVNSVSF 439
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ + + +DD +++++ T + E H D++R V + S+SDDM +K+
Sbjct: 440 SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
WD + + E H ++V V F+ D+ ASAS D T+KIW+ + TL+ H
Sbjct: 500 WDTATVPLQNNL-ESHDNWVRSVVFS-HDSRLLASASDDMTVKIWDTATGSLENTLEGHD 557
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
VN V + D L + SDD T K+W T + T +G ++ F ++
Sbjct: 558 DRVNSVSF--SPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLA 615
Query: 246 TGSEDGTVRIWHATTYRLENT--LNYGLERV 274
+ +DGTV+IW Y L +T L++ ++R+
Sbjct: 616 SAMDDGTVKIWDMEIYSLRHTFDLDHEIQRI 646
Score = 50 (22.7 bits), Expect = 4.3e-28, Sum P(4) = 4.3e-28
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 616 KEHHNSVARFLESRGMIEEAIEV-ATDPDYRFELAIQLGRLEVAQEIATE 664
KE H L SRG + + ++ P Y LA GRLE AQ++ +E
Sbjct: 1042 KEGHLLSVSLLLSRGALVDIPDINGQTPLY---LAAINGRLEAAQKLLSE 1088
Score = 49 (22.3 bits), Expect = 4.3e-28, Sum P(4) = 4.3e-28
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 761 SYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGV 818
S + V+++ A+W + + + +++ + N+ DD + A+ S A + G+
Sbjct: 1684 SIMAFNVNKVAAVWGRFAKWITENTVHAISSMKVADNMVDDDKKFEAIGSCAELSLGI 1741
Score = 39 (18.8 bits), Expect = 4.3e-28, Sum P(4) = 4.3e-28
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 492 NRDVVSAYLDSGKPVDEQGVEDAFELLHE 520
+R +VS L+ G V+E+ + L HE
Sbjct: 894 HRRIVSTLLEKGAKVNEKDKSERVPL-HE 921
Score = 38 (18.4 bits), Expect = 5.4e-28, Sum P(4) = 5.4e-28
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 494 DVVSAYLDSGKPVDEQGVEDAFELLHE 520
DVV L++G VDE G + LHE
Sbjct: 929 DVVHFLLENGAKVDE-GDKAGRVPLHE 954
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/138 (34%), Positives = 65/138 (47%)
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S DM IKLWD++ G+ C + GH H V V P + SAS D+TIK+W + +
Sbjct: 1 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYC 58
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
T H++ V V D + + S+D T +VW TK C L H H V + +
Sbjct: 59 VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Query: 238 HPELPII----ITGSEDG 251
PE TGSE G
Sbjct: 117 APESSYSSISEATGSEVG 134
Score = 169 (64.5 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 32/116 (27%), Positives = 63/116 (54%)
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
DM I+++++ + ++ H + VA+ P +++S+S D IK+W+ + G+ C +
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 61
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
F GH +V V N +D AS S D+T+++W + + + L H+ V C+ +
Sbjct: 62 FTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Score = 167 (63.8 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + +GG ++++ +DD T +VWDY+ K C++TL H H V+++ FH P
Sbjct: 135 HDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 192
Query: 244 IITGSEDGTVRIW 256
++TGS D TV++W
Sbjct: 193 VVTGSVDQTVKVW 205
Score = 148 (57.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ QT C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYC 58
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
V+T GH V V + + +I + S D TVR+W T
Sbjct: 59 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 97
Score = 145 (56.1 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 44/168 (26%), Positives = 76/168 (45%)
Query: 206 SDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
S D T K+WD+Q C++T+ GH HNVS+V P I++ S D T+++W T
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 266 TLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTV 325
T G R W R+V +GT++ ++ V + K A+ E + V
Sbjct: 61 TFT-G-HREWV--------RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 110
Query: 326 NIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD 373
++ + E + E+G D + + + + G+F++ C D
Sbjct: 111 -VECISWAPESSYSSISEATGSEVGH-DNWVRGVLFHSGGKFILSCAD 156
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/87 (27%), Positives = 48/87 (55%)
Query: 85 NYNTMDKVKVFEA-HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
+Y+++ + E H +++R V H ++LS +DD +++WD+ K C + H H
Sbjct: 121 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEH 179
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIW 170
+V + F+ K + S+D+T+K+W
Sbjct: 180 FVTSLDFH-KTAPYVVTGSVDQTVKVW 205
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 43 NYQSQTMAKSFEVT-ELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
+Y S + A EV + VR F + +++++ ADD +RV++Y +K AH +
Sbjct: 121 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 180
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + H T PYV++ S D +K+W+
Sbjct: 181 VTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH ++V V F+ + A D+T+++W+ + TL+AH+ V +D+
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA-- 190
Query: 200 PYLITGSDDHTAKVWD 215
PY++TGS D T KVW+
Sbjct: 191 PYVVTGSVDQTVKVWE 206
Score = 98 (39.6 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 26/125 (20%), Positives = 57/125 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ +W++Q ++ + V S + +V+ + D I+++ T VK F
Sbjct: 5 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 64
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H +++R V + + S S+D +++W C H H V +++ P+ ++
Sbjct: 65 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHEHVVECISWAPE--SS 121
Query: 158 FASAS 162
++S S
Sbjct: 122 YSSIS 126
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 306 (112.8 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 78/308 (25%), Positives = 148/308 (48%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP I+++ T+ +W++++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G+ C + F GH +V V N +D AS+S D+T+++W + + + L H+
Sbjct: 221 VATGY-CVKTFTGHREWVRMVRPN-QDGTLIASSSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF-----------TGGDK-------PYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + TG + P+L++GS D T K+WD C+ TL GH
Sbjct: 279 VECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V HP I++ ++D T+RIW R TL+ V ++ + K++ +V G
Sbjct: 339 NWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 248 (92.4 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 66/269 (24%), Positives = 123/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + + + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + SSS+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRV 260
Query: 126 W------------DWEKGWMCTQIFEGHSH-YVMQVTFNP-----KDTNTFASASLDRTI 167
W + E C +H +++ T + K S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ TL H V V GG Y+++ +DD T ++WDY+ K C +TL
Sbjct: 321 KMWDVSIGMCLMTLVGHDNWVRGVLVHPGGK--YIVSCADDKTLRIWDYKNKRCTKTLSA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 231 (86.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 63/218 (28%), Positives = 97/218 (44%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDF-ERTLKGHTDSVQDISFDHTG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVA 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 201 (75.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 56/199 (28%), Positives = 93/199 (46%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH V +V F+P + SAS D TIK+W+ + D TL H V + + G
Sbjct: 106 GHRSPVTRVIFHPV-FSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK- 163
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
L + S D T K+WD+Q C++T+ GH HNVS+V P I++ S D T+++W
Sbjct: 164 -LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Query: 260 TYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKII--- 315
T T E V + + I ++ T+ V + +E A + ++
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 316 -WAKHNEIQTVNIKSVGAD 333
WA + T+ +++ G++
Sbjct: 283 SWAPESAHPTI-LEATGSE 300
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 60/230 (26%), Positives = 100/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL--------- 111
+ + ++D +RV+ T + H + C++ HPT+
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V +P + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIG-MCLMTLVGHDNWVRGVLVHPGGKYIVSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T++IW+ + TL AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
Score = 39 (18.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 362 NPNGRFVVVCGD 373
+P G+++V C D
Sbjct: 347 HPGGKYIVSCAD 358
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 306 (112.8 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 80/297 (26%), Positives = 143/297 (48%)
Query: 9 RKLAQRSERVKSVDLHPSEPW-ILASLYS-GTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+KL + V HP W I+AS T+ +W+Y++ + ++ + V
Sbjct: 100 QKLTGHRLPITRVIFHPL--WTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAID 157
Query: 67 ARKQWVVAGADDMFIRVYNYN-TMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
A + +V+ + D+ I+++++ T D +K + H + V PT +VLS+S D IK
Sbjct: 158 AAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQ 217
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
WD G+ C F GH+ +V + + D FASASLD+T+ +W+ + L H+
Sbjct: 218 WDISTGY-CVYTFRGHNDWVRMIRIS-NDGTLFASASLDQTVTVWSFATKSAKLVLRDHE 275
Query: 186 KGVNCVDY-----FTG--GDKP------YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
V CV++ +T G +P L +GS D + K W+ T + TL H + V
Sbjct: 276 HAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWV 335
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ FHP+ +I+ ++D T+R+W + R + V + + ++S ++ G
Sbjct: 336 RGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITG 392
Score = 275 (101.9 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 70/266 (26%), Positives = 126/266 (47%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNY-QSQTMAKSFEVTELPVRSAK 64
+++R L ++ V + + + +++ ++ +W++ Q+ KS + E V S
Sbjct: 139 QLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVT 198
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F+ +V++ + D I+ ++ +T V F H D++R + + S+S D +
Sbjct: 199 FLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVT 258
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNP--------------KDTNTFASASLDRTIKIW 170
+W + + H H V V + P T+ S S DR+IK W
Sbjct: 259 VWSFATK-SAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAW 317
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
N+ + D FTL AH+ V + + G YLI+ +DD T +VW+ + C++ +E H H
Sbjct: 318 NINTGDVLFTLLAHENWVRGLAFHPKGK--YLISVADDKTLRVWELSAQRCMKAIEAHEH 375
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIW 256
VS V FH P +ITGS D + ++W
Sbjct: 376 FVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 240 (89.5 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 70/258 (27%), Positives = 115/258 (44%)
Query: 58 LPVRSAKFVARKQWVVAGA--DDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVL 115
LP+ + + W + + +D I+V++Y T + + HTD + +A+ ++
Sbjct: 107 LPI--TRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLV 164
Query: 116 SSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTIKIWNLGS 174
S S D+ IKLWD+ + + C + +GH H V VTF P T F SAS D TIK W++ +
Sbjct: 165 SCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP--TGDFVLSASRDHTIKQWDIST 222
Query: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSA 234
+T H V + D + S D T VW + TKS L H H V
Sbjct: 223 GYCVYTFRGHNDWVRMIRI--SNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVEC 280
Query: 235 VCFHPEL---------P------IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY 279
V + P+ P I+ +GS D +++ W+ T + TL V + +
Sbjct: 281 VEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAF 340
Query: 280 MKSSRRIVIGYDEGTIMV 297
+ ++ D+ T+ V
Sbjct: 341 HPKGKYLISVADDKTLRV 358
Score = 196 (74.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/135 (34%), Positives = 71/135 (52%)
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
DW TQ GH + +V F+P T AS S D TIK+W+ + TL H
Sbjct: 91 DWIPRPPETQKLTGHRLPITRVIFHPLWT-IMASCSEDATIKVWDYETGQLERTLKGHTD 149
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIII 245
VN + G + L++ S D + K+WD+ QT C+++L+GH H VS+V F P ++
Sbjct: 150 AVNDIAIDAAGKQ--LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVL 207
Query: 246 TGSEDGTVRIWHATT 260
+ S D T++ W +T
Sbjct: 208 SASRDHTIKQWDIST 222
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/223 (23%), Positives = 94/223 (42%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
+ L V SV P+ ++L++ T+ W+ + +F VR + ++
Sbjct: 185 KSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIR-ISN 243
Query: 69 KQWVVAGAD-DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPY-------------- 113
+ A A D + V+++ T V H + CV P Y
Sbjct: 244 DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTH 303
Query: 114 -VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
+ S S D IK W+ G + + H ++V + F+PK + A D+T+++W L
Sbjct: 304 ILFSGSRDRSIKAWNINTGDVLFTLL-AHENWVRGLAFHPKGKYLISVAD-DKTLRVWEL 361
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+ ++AH+ V+ V + P++ITGS D + KVW+
Sbjct: 362 SAQRCMKAIEAHEHFVSTVAFHQ--TSPFVITGSVDMSCKVWE 402
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 167 (63.8 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + +GG ++++ +DD T +VWDY+ K C++TL H H V+++ FH P
Sbjct: 132 HDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 189
Query: 244 IITGSEDGTVRIW 256
++TGS D TV++W
Sbjct: 190 VVTGSVDQTVKVW 202
Score = 163 (62.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 31/115 (26%), Positives = 62/115 (53%)
Query: 79 MFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIF 138
M I+++++ + ++ H + VA+ P +++S+S D IK+W+ + G+ C + F
Sbjct: 1 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTF 59
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
GH +V V N +D AS S D+T+++W + + + L H+ V C+ +
Sbjct: 60 TGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 113
Score = 140 (54.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ QT CV+T
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTF 59
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
GH V V + + +I + S D TVR+W T
Sbjct: 60 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 94
Score = 139 (54.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 42/164 (25%), Positives = 74/164 (45%)
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T K+WD+Q C++T+ GH HNVS+V P I++ S D T+++W T T
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT- 60
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKS 329
G R W R+V +GT++ ++ V + K A+ E + V ++
Sbjct: 61 G-HREWV--------RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-VEC 110
Query: 330 VGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD 373
+ E + E+G D + + + + G+F++ C D
Sbjct: 111 ISWAPESSYSSISEATGSEVGH-DNWVRGVLFHSGGKFILSCAD 153
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 24/87 (27%), Positives = 48/87 (55%)
Query: 85 NYNTMDKVKVFEA-HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
+Y+++ + E H +++R V H ++LS +DD +++WD+ K C + H H
Sbjct: 118 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEH 176
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIW 170
+V + F+ K + S+D+T+K+W
Sbjct: 177 FVTSLDFH-KTAPYVVTGSVDQTVKVW 202
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 26/86 (30%), Positives = 47/86 (54%)
Query: 43 NYQSQTMAKSFEVT-ELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
+Y S + A EV + VR F + +++++ ADD +RV++Y +K AH +
Sbjct: 118 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 177
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + H T PYV++ S D +K+W+
Sbjct: 178 VTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH ++V V F+ + A D+T+++W+ + TL+AH+ V +D+
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA-- 187
Query: 200 PYLITGSDDHTAKVWD 215
PY++TGS D T KVW+
Sbjct: 188 PYVVTGSVDQTVKVWE 203
Score = 98 (39.6 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 26/125 (20%), Positives = 57/125 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ +W++Q ++ + V S + +V+ + D I+++ T VK F
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H +++R V + + S S+D +++W C H H V +++ P+ ++
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHEHVVECISWAPE--SS 118
Query: 158 FASAS 162
++S S
Sbjct: 119 YSSIS 123
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 310 (114.2 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 77/240 (32%), Positives = 122/240 (50%)
Query: 30 ILASLYSG-TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
+LAS TV IW+ ++ ++ + E VRS F + ++A A D +++++ T
Sbjct: 310 LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF-SHDSRLLASASDSTVKIWDTGT 368
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
E H D++R V + S+SDD +K+WD G + EGH +V V
Sbjct: 369 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL-QHTLEGHRDWVRSV 427
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
F+ D+ ASAS D T+KIW+ G+ TL+ H+ V V + D L + SDD
Sbjct: 428 IFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF--SHDSRLLASASDD 484
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
T ++WD + S TLEGH+ V++V F + ++ + S D TVRIW L++T +
Sbjct: 485 RTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFD 544
Score = 297 (109.6 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 76/256 (29%), Positives = 126/256 (49%)
Query: 43 NYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYI 102
N+ S + ++ E E V S + + + + +DD +++++ T E H+D +
Sbjct: 283 NHWSPCL-QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLV 341
Query: 103 RCVAV-HPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
R V H + +L+S+ D +K+WD G + EGH +V V F+ D+ ASA
Sbjct: 342 RSVIFSHDSR--LLASASDSTVKIWDTGTGSL-QHTLEGHRDWVRSVIFS-HDSQLLASA 397
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
S D T+KIW+ G+ TL+ H+ V V + D L + SDD T K+WD T S
Sbjct: 398 SDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF--SHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
TLEGH V +V F + ++ + S+D TVRIW ++TL V ++ +
Sbjct: 456 QHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH 515
Query: 282 SSRRIVIGYDEGTIMV 297
SR + ++ T+ +
Sbjct: 516 DSRLLASASNDQTVRI 531
Score = 196 (74.1 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 57/181 (31%), Positives = 91/181 (50%)
Query: 7 IKRKLAQRSERVKSVDL-HPSEPWILASLYS-GTVCIWNYQSQTMAKSFEVTELPVRSAK 64
++ L + V+SV H S+ +LAS TV IW+ + ++ + E VRS
Sbjct: 371 LQHTLEGHRDWVRSVIFSHDSQ--LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 428
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F Q + + +DD +++++ T E H D++R V + S+SDD ++
Sbjct: 429 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVR 488
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG--SPDPNFTLD 182
+WD EKG EGHS V V+F+ D+ ASAS D+T++IW++ S F LD
Sbjct: 489 IWDTEKG-SHKHTLEGHSSLVTSVSFS-HDSRLLASASNDQTVRIWDIEARSLQHTFDLD 546
Query: 183 A 183
A
Sbjct: 547 A 547
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 284 (105.0 bits), Expect = 8.6e-24, P = 8.6e-24
Identities = 73/245 (29%), Positives = 122/245 (49%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTM-----DKVKVFEAHTDYIRCVAVHPTLPYV 114
V S KF + + + + + D IR Y NT+ + V+ F H + I VA ++
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86
Query: 115 LSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
+S+SDD +KLWD E G + + GH++Y V FNP+ +N S S D T++IW++ +
Sbjct: 87 VSASDDKTLKLWDVETGSLIKTLI-GHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT 144
Query: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-EGHTHNVS 233
L AH V VD+ G +++ S D ++WD T CV+TL + VS
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRDGS--LIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVS 202
Query: 234 AVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY---MKSSRRIVIGY 290
V F P I+ G+ D T+R+W+ ++ + T + + I + + +RIV G
Sbjct: 203 FVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGS 262
Query: 291 DEGTI 295
++ +
Sbjct: 263 EDNCV 267
Score = 258 (95.9 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 62/229 (27%), Positives = 113/229 (49%)
Query: 29 WILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
+I+++ T+ +W+ ++ ++ K+ F + +V+G+ D +R+++ T
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
+KV AH+D + V + ++SSS D L ++WD G + + + V V
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFV 204
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY-FTGGDKPYLITGSD 207
F+P +LD T+++WN+ S T H C+ F+ + +++GS+
Sbjct: 205 RFSPNGKFILVG-TLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE 263
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
D+ +W+ +K +Q LEGHT V V HP +I +GS D TVRIW
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 236 (88.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 63/259 (24%), Positives = 120/259 (46%)
Query: 51 KSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT 110
+ F E + F + +++V+ +DD +++++ T +K HT+Y CV +P
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 111 LPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
++S S D +++WD G C ++ HS V V FN +D + S+S D +IW
Sbjct: 125 SNMIVSGSFDETVRIWDVTTG-KCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW 182
Query: 171 NLGSPDPNFTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
+ G+ TL D V+ V + G +++ G+ D+T ++W+ + ++T GH
Sbjct: 183 DSGTGHCVKTLIDDENPPVSFVRFSPNGK--FILVGTLDNTLRLWNISSAKFLKTYTGHV 240
Query: 230 HNVSAVCFHPELPI-----IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSR 284
+ + C + I++GSED V +W + +L L E V + +
Sbjct: 241 N--AQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN 298
Query: 285 RIVIGYDEGTIMVKIGREE 303
I G + T+ + ++E
Sbjct: 299 LIASGSLDKTVRIWTQKKE 317
Score = 218 (81.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 54/163 (33%), Positives = 86/163 (52%)
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS---P--DPNFTLDAHQKGVN 189
+Q H+ V V F+ D ASAS D+TI+ + + + P +P H+ G++
Sbjct: 17 SQTLTSHNRAVSSVKFS-SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGIS 75
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
V + D ++++ SDD T K+WD +T S ++TL GHT+ V F+P+ +I++GS
Sbjct: 76 DVAF--SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 250 DGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
D TVRIW TT + L + V A+ + + IV YD
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYD 176
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/164 (26%), Positives = 83/164 (50%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVARK 69
L S+ V +VD + I++S Y G IW+ + K+ E P V +F
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPY---VLSSSDDMLIKLW 126
++++ G D +R++N ++ +K + H + C++ ++ ++S S+D + +W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
+ + ++ EGH+ VM V +P + N AS SLD+T++IW
Sbjct: 271 ELNSKKLLQKL-EGHTETVMNVACHPTE-NLIASGSLDKTVRIW 312
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSF--EVT-ELPVRSA 63
+K + + V V P+ +IL T+ +WN S K++ V + + SA
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA 249
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V + +V+G++D + ++ N+ ++ E HT+ + VA HPT + S S D +
Sbjct: 250 FSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 124 KLWDWEK 130
++W +K
Sbjct: 310 RIWTQKK 316
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 43/198 (21%), Positives = 82/198 (41%)
Query: 21 VDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMF 80
V+ +P I++ + TV IW+ + K PV + F +V+ + D
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGL 178
Query: 81 IRVYNYNTMDKVK-VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFE 139
R+++ T VK + + + V P ++L + D ++LW+ + +
Sbjct: 179 CRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL-KTYT 237
Query: 140 GH--SHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV-NCVDYFTG 196
GH + Y + F+ + S S D + +W L S L+ H + V N + T
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPT- 296
Query: 197 GDKPYLITGSDDHTAKVW 214
+ + +GS D T ++W
Sbjct: 297 --ENLIASGSLDKTVRIW 312
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 303 (111.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 78/256 (30%), Positives = 128/256 (50%)
Query: 4 RLEIKRKLAQRSERVKS---VDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
R E+ K ++E+ S VD+ P +P + + + + ++Y+ + F + ELPV
Sbjct: 308 REEVGYKSKLKNEKKDSEFPVDMQP-DPNVTSCTENVSAAKFDYKLNNI---FRLHELPV 363
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
+ ++++ ++D ++ + + HTD++ HP+ + +SS D
Sbjct: 364 SCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGD 423
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
IKLWD KG CT EGH+H V T++ + ASASLD T KIW++ S +T
Sbjct: 424 STIKLWDLNKG-ECTLTLEGHNHAVWSCTWHSCG-DFVASASLDMTSKIWDVNSERCRYT 481
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L H VN +++F + L+T S D T VWD +T C Q+L GH H+V+ F P
Sbjct: 482 LYGHTDSVNSIEFFPFSN--ILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPR 539
Query: 241 LPIIITGSEDGTVRIW 256
II + G ++W
Sbjct: 540 GHIIASCDARGVTKLW 555
Score = 258 (95.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 57/177 (32%), Positives = 97/177 (54%)
Query: 94 VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPK 153
+F H + C+ +HP Y++S S+D L K+ +G + GH+ ++ F+P
Sbjct: 355 IFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLT-GSGHTDWLSGCCFHPS 413
Query: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
+ A++S D TIK+W+L + TL+ H V + + GD ++ + S D T+K+
Sbjct: 414 GSK-LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD--FVASASLDMTSKI 470
Query: 214 WDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
WD ++ C TL GHT +V+++ F P I++T S D T+ +W A T + E +L YG
Sbjct: 471 WDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSL-YG 526
Score = 187 (70.9 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 56/233 (24%), Positives = 96/233 (41%)
Query: 24 HPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
HPS + S T+ +W+ + E V S + + +V + + DM ++
Sbjct: 411 HPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKI 470
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ N+ HTD + + P +L++S D + +WD G C Q GH H
Sbjct: 471 WDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTG-KCEQSLYGHMH 529
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
V TF P+ + AS K+W+ P ++D N V++ G L
Sbjct: 530 SVNDATFTPRG-HIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGR--VLA 586
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
S + + D ++ + L GH V +V F + +G DGT+R+W
Sbjct: 587 QASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 145 (56.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 53/190 (27%), Positives = 82/190 (43%)
Query: 112 PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
P V S ++++ +D++ IF H V + +P + S S DR +W
Sbjct: 334 PNVTSCTENVSAAKFDYK----LNNIFRLHELPVSCIVMHPC-RDYLISCSEDR---LWK 385
Query: 172 L-GSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGH 228
+ G P N L H ++ + G K L T S D T K+WD C TLEGH
Sbjct: 386 MVGLPQGNVLLTGSGHTDWLSGCCFHPSGSK--LATSSGDSTIKLWDLNKGECTLTLEGH 443
Query: 229 THNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG-LERVWAIGYMKSSRRIV 287
H V + +H + + S D T +IW + R TL YG + V +I + S ++
Sbjct: 444 NHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTL-YGHTDSVNSIEFFPFSNILL 502
Query: 288 IGYDEGTIMV 297
+ T+ V
Sbjct: 503 TASADKTLSV 512
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 280 (103.6 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 69/257 (26%), Positives = 121/257 (47%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V +V P+ W+ +S + IW K+ +L + +
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + +V+G+DD ++V+ +T +K + H++Y+ C +P ++S S D +++W
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 184 DVRTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 241
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 242 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 297
Query: 244 ---IITGSEDGTVRIWH 257
I++GSED V IW+
Sbjct: 298 GKWIVSGSEDNMVYIWN 314
Score = 246 (91.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 60/227 (26%), Positives = 109/227 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ +W + K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 137 TLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 196
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 256
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 257 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNMVYIWN 314
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIWHATT 260
Q+K VQ L+GHT V HP II + + D T+++W + T
Sbjct: 315 LQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
Score = 230 (86.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 53/170 (31%), Positives = 85/170 (50%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWS-SDSRL 128
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
S S D+T+K+W L + TL H V C ++ +++GS D + ++WD +
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 186
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
T C++TL H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 187 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 56/155 (36%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 70 GHTKAVSAVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 124
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++GSDD T KVW+ T ++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSF--EVTELPVRSAKF-VARKQWVVA 74
V V P+ +ILA+ T+ +W+Y K++ E A F V +W+V+
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS--DDMLIKLW 126
G++D + ++N + + V+ + HTD + C A HPT + S++ +D IKLW
Sbjct: 304 GSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 47/198 (23%), Positives = 89/198 (44%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 66 FTLAGHTKAVSAVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMV 297
+ ++++GS+D T+++W +T + TL V+ + S IV G +DE +
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 298 KIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGAD-----YEVTDGERLPLAVKELGTC 352
+ + + ++ + A H I S D ++ G+ L + +
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 239
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 240 DNPPVSFVKFSPNGKYIL 257
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 294 (108.6 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 76/252 (30%), Positives = 113/252 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ SV P + ++ T+ +W + + F+ PVRS F A Q++ + ++
Sbjct: 63 ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V+N + HT ++RC P ++S S+D IK+WD C
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNN 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FNP T ASA D T+KIW++ H GVNCV + G
Sbjct: 182 FSDFVGFANFVAFNPNGT-CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ YLIT S D T K+ D + TL+GHT V V F + +G D V +W
Sbjct: 241 N--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWR 298
Query: 258 ATTYRLENTLNY 269
T + + LNY
Sbjct: 299 -TNF---DELNY 306
Score = 254 (94.5 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 70/291 (24%), Positives = 126/291 (43%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + SVD P+ + + + +W+ + Q A + + + S +F
Sbjct: 10 LERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + D IR++ + K F+AHT +R V ++ S+S+D IK+W
Sbjct: 70 PLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + ++ H+H+V F+P D S S D+TIKIW+ +
Sbjct: 130 NMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
N V + G + + DHT K+WD + +Q + H+ V+ V FHP +IT
Sbjct: 188 FANFVAFNPNGT--CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLIT 245
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S DGT++I RL TL V+ + + K G + +++
Sbjct: 246 ASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLL 296
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/253 (24%), Positives = 109/253 (43%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ + + F+ + + S F + + G+ D F+ +++ + + H D I
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
V P + S+S D I+LW +K ++ F+ H+ V V F+ D ASAS D
Sbjct: 66 VQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSA-DGQFLASASED 123
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
++IK+WN+ ++L H V C + G +++ S+D T K+WD K CV
Sbjct: 124 KSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSR 284
+ V F+P I + D TV+IW +L V + + S
Sbjct: 182 FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN 241
Query: 285 RIVIGYDEGTIMV 297
++ +GT+ +
Sbjct: 242 YLITASSDGTLKI 254
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 131 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 188
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 189 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 244
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
I++GSED V IW+ T + L
Sbjct: 245 GKWIVSGSEDNLVYIWNLQTKEIVQKL 271
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 84 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 143
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 144 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 203
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 204 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 261
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 262 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 228 (85.3 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 17 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 71
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 166
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 13 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 131 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 186
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 187 DNPPVSFVKFSPNGKYIL 204
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 157 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 270
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
I++GSED V IW+ T + L
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 230 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 287
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 288 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 43 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 97
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 212
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 213 DNPPVSFVKFSPNGKYIL 230
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 157 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 270
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
I++GSED V IW+ T + L
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 230 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 287
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 288 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 43 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 97
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 212
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 213 DNPPVSFVKFSPNGKYIL 230
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 157 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 270
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
I++GSED V IW+ T + L
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 230 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 287
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 288 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 43 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 97
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 212
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 213 DNPPVSFVKFSPNGKYIL 230
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 157 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 270
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
I++GSED V IW+ T + L
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 230 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 287
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 288 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 43 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 97
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 212
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 213 DNPPVSFVKFSPNGKYIL 230
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 274 (101.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 69/267 (25%), Positives = 124/267 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 157 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T GH + C +
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTG 270
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
I++GSED V IW+ T + L
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKL 297
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 230 LA-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 287
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 288 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 43 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 97
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 212
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 213 DNPPVSFVKFSPNGKYIL 230
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 273 (101.2 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 75/295 (25%), Positives = 132/295 (44%)
Query: 15 SERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVA 74
++ + +V P ++ S TV IWN + ++ +L V + A + +V
Sbjct: 79 TKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVT 138
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
+DD +++Y T+ K + HT+Y+ C +P V+S S D +++WD G MC
Sbjct: 139 ASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTG-MC 197
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDY 193
+ HS V V+FN +D + S S D ++IW+ + TL D V V +
Sbjct: 198 VKTLPAHSDPVSAVSFN-RDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKF 256
Query: 194 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-----IITGS 248
G Y+++ + D+T K+WD+ ++ +GH +N C + II+GS
Sbjct: 257 SPNGK--YILSSNLDNTLKLWDFGKGKTLKQYQGHENN--KYCIFANFSVTGGKWIISGS 312
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
ED + +W+ T + +L + V A I G E ++I R +
Sbjct: 313 EDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRSD 367
Score = 238 (88.8 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 52/167 (31%), Positives = 85/167 (50%)
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G+ EGH+ + V F+P ++S D+T+KIWN+ TL H+ GVN
Sbjct: 68 GYKLISTIEGHTKSISAVKFSPCG-KFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN- 125
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
D+ D ++T SDD T K+++ T +TL+GHT+ V F+P+ ++++GS D
Sbjct: 126 -DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFD 184
Query: 251 GTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+VRIW T TL + V A+ + + I G +G + +
Sbjct: 185 ESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRI 231
Score = 229 (85.7 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
+ E HT I V P ++ +SS D +K+W+ C + GH V ++
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSD-LSCERTLTGHKLGVNDFAWS 130
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
D+ + +AS D+T+KI+ + + TL H V C ++ +++GS D +
Sbjct: 131 A-DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNF--NPQSSLVVSGSFDESV 187
Query: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
++WD +T CV+TL H+ VSAV F+ + +I +GS DG VRIW + TL
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTL 243
Score = 157 (60.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 48/215 (22%), Positives = 96/215 (44%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
+++ + L + V + +P +++ + +V IW+ ++ K+ PV +
Sbjct: 153 VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVS 212
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVF-EAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F + +G+ D +R+++ VK + + V P Y+LSS+ D +
Sbjct: 213 FNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTL 272
Query: 124 KLWDWEKGWMCTQIFEGHSH--YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
KLWD+ KG Q ++GH + Y + F+ S S D I +WNL + + +L
Sbjct: 273 KLWDFGKGKTLKQ-YQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSL 331
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGS--DDHTAKVW 214
+ H + V D + + +G+ D+T ++W
Sbjct: 332 EGHTQAVIASDCHPMQNM--IASGALEPDNTIRIW 364
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 48/197 (24%), Positives = 92/197 (46%)
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
T++ H K ++ V + G +L T S D T K+W+ SC +TL GH V+ +
Sbjct: 74 TIEGHTKSISAVKFSPCGK--FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM-- 296
+ I+T S+D T++I+ T ++ TL V+ + S +V G +DE +
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD 191
Query: 297 VKIGR--EEPVASMDNSGKIIWAKHNEIQTV-NIKSVGADYEVTDGERLPLAVKELGTCD 353
V+ G + A D + + + + T + + ++ +G+ VK L +
Sbjct: 192 VRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ----CVKTLVDDE 247
Query: 354 LYPQS-LKHNPNGRFVV 369
P + +K +PNG++++
Sbjct: 248 NPPVAFVKFSPNGKYIL 264
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 285 (105.4 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 78/286 (27%), Positives = 136/286 (47%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L S+ +++V P + + T+ +W+ S + ++ E V+S F Q
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQ 96
Query: 71 WVVAGADDMFIRVYNYNTMDKVK-VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+ +G+ D I+++N + D +K E H+D + VA P +LW+
Sbjct: 97 LLASGSSDTTIKLWN-SASDSLKHTMEGHSDRVESVAFSPNG------------QLWNPA 143
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
G + I EGHS +V+ V F+P D AS S ++TIK+W+ + TL H V
Sbjct: 144 IGSLKHTI-EGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV- 200
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
+ D L +GS+D T K+WD + S TLEGH++ + ++ F P ++ +GS
Sbjct: 201 -LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSS 259
Query: 250 DGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
D T+++W T +TL + V ++ + S+ + G + TI
Sbjct: 260 DATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTI 305
Score = 271 (100.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 75/261 (28%), Positives = 121/261 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K+ L S V+SV P+ + + T+ +WN S ++ + E V S F
Sbjct: 75 LKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFS 134
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Q ++N E H+D++ VA P + S S + IKLW
Sbjct: 135 PNGQ------------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLW 182
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
D + GHS++V+ + F+P D AS S D TIK+W+ S TL+ H
Sbjct: 183 DSATCGL-KHTLGGHSNWVLPLVFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSN 240
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
+ + + G L +GS D T K+WD T S TL+GH+ V +V F P+ ++ +
Sbjct: 241 KIESLAFSPNGQ--LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLES 298
Query: 247 GSEDGTVRIWHATTYRLENTL 267
GS D T+++W T L++++
Sbjct: 299 GSGDNTIKLWDPATGILKHSM 319
Score = 241 (89.9 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 62/205 (30%), Positives = 97/205 (47%)
Query: 91 KVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTF 150
+++ E H+D+I V P + S S+D IKLWD G + Q EGHS V V F
Sbjct: 33 ELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGL-KQTLEGHSSSVQSVAF 91
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+P AS S D TIK+WN S T++ H V V + G
Sbjct: 92 SPNG-QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------- 137
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++W+ S T+EGH+ V +V F P+ ++ +GS + T+++W + T L++TL
Sbjct: 138 -QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTI 295
V + + R + G ++ TI
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATI 221
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/221 (27%), Positives = 100/221 (45%)
Query: 41 IWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTD 100
+WN ++ + E V S F Q + +G+ + I++++ T H++
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSN 198
Query: 101 YIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 160
++ + P + S S+D IKLWD G + EGHS+ + + F+P AS
Sbjct: 199 WVLPLVFSPDGRLLASGSNDATIKLWDPPSGSL-KHTLEGHSNKIESLAFSPNG-QLLAS 256
Query: 161 ASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
S D TIK+W+ + TL H V V + D L +GS D+T K+WD T
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVF--SPDSQLLESGSGDNTIKLWDPATGI 314
Query: 221 CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
++ V ++ F ELP +IT +++ WH T Y
Sbjct: 315 LKHSMRT-PGIVRSIEFSIELPQLITNLGTFSIQAWH-TGY 353
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 268 (99.4 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 67/267 (25%), Positives = 119/267 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++ LA S + SV P+ W+ +S + IW K+ L + +
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD ++V++ + +K + H+D++ C +P ++S S D +K+W
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
+ + G C + HS + V FN + S S D +IW+ S TL D
Sbjct: 151 EVKTG-KCLKTLSAHSDPISAVNFNCNGS-LIVSGSYDGLCRIWDAASGQCLRTLADEGN 208
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++T + D+T K+WDY C++T GH + C +
Sbjct: 209 PPVSFVKFSPNGK--YILTATLDNTLKLWDYSRGRCLKTYTGHKNE--KYCLFASFSVTG 264
Query: 244 ---IITGSEDGTVRIWHATTYRLENTL 267
+++GSED V IW+ T + L
Sbjct: 265 RKWVVSGSEDNMVYIWNLQTKEIVQRL 291
Score = 230 (86.0 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 65/253 (25%), Positives = 118/253 (46%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K+ L S + V ++++ T+ +W+ +S K+ + V F
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+V+G+ D ++++ T +K AH+D I V + ++S S D L ++WD
Sbjct: 134 PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G + + + V V F+P +A+LD T+K+W+ T H+
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNG-KYILTATLDNTLKLWDYSRGRCLKTYTGHKNE 252
Query: 188 VNCV-DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV-SAVCFHPELPIII 245
C+ F+ + ++++GS+D+ +W+ QTK VQ L+GHT V SA C HP II
Sbjct: 253 KYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC-HPTKNIIA 311
Query: 246 TGS--EDGTVRIW 256
+ + D T+++W
Sbjct: 312 SAALENDKTIKVW 324
Score = 203 (76.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 50/153 (32%), Positives = 78/153 (50%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GHS + V F+P AS++ D I IW G+ D N + + D D
Sbjct: 37 GHSAAISSVKFSPNG-EWLASSAADALIIIW--GAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
L++ SDD T KVWD ++ C++TL+GH+ V F+P +I++GS D +V+IW
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
Query: 260 TYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL+ + + A+ + + IV G YD
Sbjct: 154 TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/169 (23%), Positives = 85/169 (50%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQS-QTMAKSFEVTELPVRSAKFVA 67
+ L+ S+ + +V+ + + I++ Y G IW+ S Q + + PV KF
Sbjct: 159 KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSP 218
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP---YVLSSSDDMLIK 124
++++ D +++++Y+ +K + H + C+ ++ +V+S S+D ++
Sbjct: 219 NGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVY 278
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL--DRTIKIWN 171
+W+ + + Q +GH+ V+ +P N ASA+L D+TIK+W+
Sbjct: 279 IWNLQTKEI-VQRLQGHTDVVISAACHPTK-NIIASAALENDKTIKVWS 325
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 52/214 (24%), Positives = 93/214 (43%)
Query: 177 PNF----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
PN+ TL H ++ V + G+ +L + + D +W +C +TL GH+ +
Sbjct: 27 PNYALRLTLAGHSAAISSVKFSPNGE--WLASSAADALIIIWGAYDGNCKKTLYGHSLEI 84
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
S V + + +++ S+D T+++W + + TL + V+ + S IV G +D
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 292 EGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLA-VKEL- 349
E VKI + + K + A + I VN G+ + G L + +
Sbjct: 145 ES---VKIWEVKTGKCL----KTLSAHSDPISAVNFNCNGS--LIVSGSYDGLCRIWDAA 195
Query: 350 -GTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTAL 382
G C L + + NP FV +G+YI+ L
Sbjct: 196 SGQC-LRTLADEGNPPVSFVKFSPNGKYILTATL 228
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 268 (99.4 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 68/246 (27%), Positives = 106/246 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V V PS + + TVC+W + + F+ VRS F + Q
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ 117
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD I+V+ + + H +++RC P + S+SDD +KLWD +
Sbjct: 118 SLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD-KT 176
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
C F H + V F+P T A+A D+T+K+W++ H VN
Sbjct: 177 SRECIHSFCEHGGFANHVEFHPSGT-CIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNS 235
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ + G+ YLIT S+D T K+ D + TL GH + V F +G D
Sbjct: 236 LSFHPSGN--YLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSD 293
Query: 251 GTVRIW 256
V +W
Sbjct: 294 EQVMVW 299
Score = 234 (87.4 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 60/239 (25%), Positives = 105/239 (43%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSD 119
+ S F K+ + +G+ D +++++ + H D + CV P+ V S S
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSR 82
Query: 120 DMLIKLW-DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + LW KG + +F+ H+ V V F+ D + +AS D+TIK+W +
Sbjct: 83 DKTVCLWVPSVKGE--STVFKAHTATVRSVHFS-SDGQSLVTASDDKTIKVWTVHRQKFL 139
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
F+L H V C + G + + SDD T K+WD ++ C+ + H + V FH
Sbjct: 140 FSLSQHINWVRCARFSPDGR--LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFH 197
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
P I D TV++W RL V ++ + S ++ ++ T+ +
Sbjct: 198 PSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 282 (104.3 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 66/211 (31%), Positives = 108/211 (51%)
Query: 58 LPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH-PTLPYVLS 116
LP+ + + G+ D +V++ + +++ E H + + +A + P + +
Sbjct: 93 LPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 117 SSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD 176
S D KLW E G C F GH+ ++ ++FNP+ T A+ S+D T K+W++ S +
Sbjct: 153 GSFDKTCKLWSAETG-KCYHTFRGHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQSGE 210
Query: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
TL H + + + T GD+ +ITGS DHT VWD T V TL GH +S+
Sbjct: 211 EVVTLTGHLAEIISLSFDTSGDR--IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL 268
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTL 267
F + +I+TGS D T +W AT+ + TL
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATL 299
Score = 250 (93.1 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 63/236 (26%), Positives = 106/236 (44%)
Query: 21 VDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMF 80
+ +P + T +W+ QS + + S F ++ G+ D
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHT 242
Query: 81 IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEG 140
+ V++ +T KV H I +L+ S D LWD G C G
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG-KCVATLTG 301
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
H ++ F+ A+AS D T +++N + L+ H+ ++ + + G++
Sbjct: 302 HDDEILDSCFDYTG-KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNR- 359
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+TGS D TA++WD QT C+Q LEGHT + + F+ + I+ITGS+D + RIW
Sbjct: 360 -LLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 230 (86.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 67/279 (24%), Positives = 117/279 (41%)
Query: 20 SVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV-ARKQWVVAGADD 78
+V L+ + + Y T +W+ S + E V + F + G+ D
Sbjct: 97 NVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 79 MFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIF 138
++++ T F HT I C++ +P V + S D KLWD + G +
Sbjct: 157 KTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL- 215
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
GH ++ ++F+ + + S D T+ +W+ + TL H ++ + D
Sbjct: 216 TGHLAEIISLSFDTSG-DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALF--SWD 272
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
++TGS D T +WD + CV TL GH + CF +I T S DGT R+++A
Sbjct: 273 CSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNA 332
Query: 259 TTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
TT + L + I + R++ G + T +
Sbjct: 333 TTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARI 371
Score = 217 (81.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 57/175 (32%), Positives = 84/175 (48%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
KV AH + VA++ ++ S D K+WD G + EGH + V + FN
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIAFNN 144
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ A+ S D+T K+W+ + T H + C+ + + TGS D TAK
Sbjct: 145 PYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSF--NPQSTVVATGSMDTTAK 202
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
+WD Q+ V TL GH + ++ F IITGS D TV +W A+T R +TL
Sbjct: 203 LWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL 257
Score = 217 (81.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 59/270 (21%), Positives = 117/270 (43%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I + T +W+ ++ +F + F + V G+ D ++++ +
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
++V H I ++ + +++ S D + +WD G + GH +
Sbjct: 210 EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI-GHCAEISSAL 268
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV--NCVDYFTGGDKPYLITGSD 207
F+ D + + S+D+T +W+ S TL H + +C DY TG + T S
Sbjct: 269 FS-WDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDY-TG---KLIATASA 323
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
D TA+V++ T+ C+ LEGH +S + F+P+ ++TGS D T RIW T + L
Sbjct: 324 DGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVL 383
Query: 268 NYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ +++ + ++ G + + +
Sbjct: 384 EGHTDEIFSCAFNYKGNIVITGSKDNSCRI 413
Score = 215 (80.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 49/163 (30%), Positives = 81/163 (49%)
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
++ H + V N K + F + S DRT K+W+ S + TL+ H+ V + +
Sbjct: 86 KVLRAHILPLTNVALN-KAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 196 G-GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
GDK + TGS D T K+W +T C T GHT + + F+P+ ++ TGS D T +
Sbjct: 145 PYGDK--IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAK 202
Query: 255 IWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+W + TL L + ++ + S RI+ G + T++V
Sbjct: 203 LWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVV 245
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 286 (105.7 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 73/239 (30%), Positives = 106/239 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P + ++ TV +W + + F+ PVRS F A Q++ ++
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V+N + HT ++RC P ++S S+D IK+WD C
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNN 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FNP T ASA D T+KIW++ H GVNCV + G
Sbjct: 182 FSDSVGFANFVDFNPNGT-CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ Y+IT S D T K+ D + TL+GHT V V F + +G D V +W
Sbjct: 241 N--YIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 266 (98.7 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 76/278 (27%), Positives = 129/278 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + SVD PS + + + + +WN + Q A + + V S +F
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + D +R++ + K F+AHT +R V ++ ++S+D IK+W
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAH 184
+ + ++ H+H+V F+P D S S D+TIKIW+ + NF+ D+
Sbjct: 130 NMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS-DS- 185
Query: 185 QKG-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
G N VD+ G + + DHT K+WD + +Q + H+ V+ V FHP
Sbjct: 186 -VGFANFVDFNPNGT--CIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
IIT S DGT++I RL TL V+ + + K
Sbjct: 243 IITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Score = 218 (81.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 59/253 (23%), Positives = 108/253 (42%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ + + F+ + + S F + + + D F+ ++N + + H D +
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTS 65
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
V P + S+S D ++LW +K ++ F+ H+ V V F+ D A+AS D
Sbjct: 66 VQFSPLGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSA-DGQFLATASED 123
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
++IK+WN+ ++L H V C + G +++ S+D T K+WD K CV
Sbjct: 124 KSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSR 284
+ V F+P I + D TV+IW +L V + + S
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN 241
Query: 285 RIVIGYDEGTIMV 297
I+ +GT+ +
Sbjct: 242 YIITASSDGTLKI 254
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 266 (98.7 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 71/199 (35%), Positives = 98/199 (49%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+ ++ A+ Y LS+S D I+LWD EKG CT F GH+ V+ V+ +P D
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKG-ECTHQFVGHTSDVLSVSISP-DNRQ 119
Query: 158 FASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
S S D+TIKIWN+ G+ T H V+CV + D ++ D KVWD
Sbjct: 120 VVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Query: 217 QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW--HATT--YRLE-----NTL 267
+T S + GHT VSAV P+ + +G DGT+ +W + +T Y LE N L
Sbjct: 180 ETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINAL 239
Query: 268 NYGLERVWAIGYMKSSRRI 286
+ R W SS RI
Sbjct: 240 VFSPNRYWLCAATGSSIRI 258
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/266 (24%), Positives = 116/266 (43%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+R+L S V L + L++ + T+ +W+ + F V S
Sbjct: 56 QRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISP 115
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEA-HTDYIRCVAVHPT---LPYVLSSSDDMLI 123
+ VV+G+ D I+++N K + + H+D++ CV P L +V S+ D +
Sbjct: 116 DNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFV-SAGWDKAV 174
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
K+WD E + T + GH+ YV VT +P D + AS D T+ +W+L ++L+A
Sbjct: 175 KVWDLETFSLRTSHY-GHTGYVSAVTISP-DGSLCASGGRDGTLMLWDLNESTHLYSLEA 232
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ +N + + Y + + + +++D +T+ V L V PE I
Sbjct: 233 -KANINALVF---SPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPEC-I 287
Query: 244 IITGSEDGT----------VRIWHAT 259
+T S DG +R+W T
Sbjct: 288 SLTWSPDGQTLFSGWTDNLIRVWQVT 313
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 68/268 (25%), Positives = 113/268 (42%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILAS-LYSGTVCIWNYQSQTMAKSFEVTELP 59
MP +L ++ L S V S+ P P IL S ++ +WN + L
Sbjct: 1 MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT 60
Query: 60 VRSAKFVAR------KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPY 113
S FV+ + ++ + D IR+++ + F HT + V++ P
Sbjct: 61 GHS-HFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQ 119
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN-TFASASLDRTIKIWNL 172
V+S S D IK+W+ T GHS +V V F+P N TF SA D+ +K+W+L
Sbjct: 120 VVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
+ + H V+ V G +G D T +WD + + +LE N+
Sbjct: 180 ETFSLRTSHYGHTGYVSAVTISPDGS--LCASGGRDGTLMLWDLNESTHLYSLEAKA-NI 236
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATT 260
+A+ F P + + ++RI+ T
Sbjct: 237 NALVFSPNR-YWLCAATGSSIRIFDLET 263
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 58/212 (27%), Positives = 97/212 (45%)
Query: 96 EAHTDYIRCVAVHPTLPYVL-SSSDDMLIKLWDWEKG----WMCTQIFEGHSHYVMQVTF 150
E H+ ++ ++ P P +L S S D I LW+ + + + GHSH+V
Sbjct: 12 EGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL 71
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ D++ SAS D+TI++W+L + H V V D +++GS D T
Sbjct: 72 S-FDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSI--SPDNRQVVSGSRDKT 128
Query: 211 AKVWDYQTKSCVQTLE--GHTHNVSAVCF--HPELPIIITGSEDGTVRIWHATTYRLENT 266
K+W+ +C T+ GH+ VS V F +P+ ++ D V++W T+ L T
Sbjct: 129 IKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLR-T 186
Query: 267 LNYG-LERVWAIGYMKSSRRIVIGYDEGTIMV 297
+YG V A+ G +GT+M+
Sbjct: 187 SHYGHTGYVSAVTISPDGSLCASGGRDGTLML 218
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 287 (106.1 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 73/236 (30%), Positives = 117/236 (49%)
Query: 21 VDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMF 80
+D+ P+ P + S S + ++Y+ + + F + ELPV K +V+ +D
Sbjct: 320 IDMQPN-PNLNVSKESLSPAKFDYKLKNI---FRLHELPVSCVSMQPHKDILVSCGEDRL 375
Query: 81 IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEG 140
+V + + HTD++ HP+ + +SS D +KLWD KG C FEG
Sbjct: 376 WKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKG-DCILTFEG 434
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
HS V T++ N AS+SLD+T KIW++ S TL H VN +++F +
Sbjct: 435 HSRAVWSCTWHSCG-NFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNT- 492
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+T S D T +WD +T C Q+L GH H+++ F P +I + G ++W
Sbjct: 493 -LLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLW 547
Score = 223 (83.6 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 57/182 (31%), Positives = 96/182 (52%)
Query: 91 KVK-VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
K+K +F H + CV++ P ++S +D L K+ K + F GH+ ++
Sbjct: 343 KLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGF-GHTDWLSDCC 401
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV-NCVDYFTGGDKPYLITGSDD 208
F+P + A++S D T+K+W+L D T + H + V +C + G ++ + S D
Sbjct: 402 FHPSG-DKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGN---FVASSSLD 457
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
T+K+WD ++ C TL GHT +V+++ F P ++T S D T+ IW A T E +L
Sbjct: 458 KTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSL- 516
Query: 269 YG 270
YG
Sbjct: 517 YG 518
Score = 188 (71.2 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 57/233 (24%), Positives = 98/233 (42%)
Query: 24 HPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
HPS + S TV +W+ +FE V S + + +V + + D ++
Sbjct: 403 HPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKI 462
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ N+ HTD + + P +L+SS D + +WD G +C Q GH H
Sbjct: 463 WDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTG-ICEQSLYGHMH 521
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
+ F+P+ + AS K+W+ P ++D N V++ + G L
Sbjct: 522 SINDAIFDPRG-HMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGR--VLA 578
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
S + + D ++ + L GH + V F + I+ +G DGTVR W
Sbjct: 579 QASGNGVIHLLDLKSGE-IHKLMGHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/165 (30%), Positives = 72/165 (43%)
Query: 137 IFEGHSHYVMQVTFNP-KDTNTFASASLDRTIKIWNLGSPDPNFTLDA--HQKGVNCVDY 193
IF H V V+ P KD S DR K+ LG P N L H ++ +
Sbjct: 347 IFRLHELPVSCVSMQPHKDI--LVSCGEDRLWKV--LGLPKCNVLLTGFGHTDWLSDCCF 402
Query: 194 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTV 253
GDK L T S D T K+WD C+ T EGH+ V + +H + + S D T
Sbjct: 403 HPSGDK--LATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTS 460
Query: 254 RIWHATTYRLENTLNYG-LERVWAIGYMKSSRRIVIGYDEGTIMV 297
+IW + R TL YG + V +I + S ++ + T+ +
Sbjct: 461 KIWDVNSERCRCTL-YGHTDSVNSIEFFPFSNTLLTSSADKTLSI 504
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 279 (103.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 63/211 (29%), Positives = 109/211 (51%)
Query: 58 LPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH-PTLPYVLS 116
LP+ + + G+ D ++++ + +++ E H + + +A + P + +
Sbjct: 93 LPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 117 SSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD 176
S D KLW E G C F GH+ ++ ++FNP+ T A+ S+D T K+W++ + +
Sbjct: 153 GSFDKTCKLWSVETG-KCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQNGE 210
Query: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
+TL H + + + T GD+ +ITGS DHT VWD T V L GH +S+
Sbjct: 211 EVYTLRGHSAEIISLSFNTSGDR--IITGSFDHTVVVWDADTGRKVNILIGHCAEISSAS 268
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTL 267
F+ + +I+TGS D T ++W AT + TL
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATL 299
Score = 266 (98.7 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 64/236 (27%), Positives = 110/236 (46%)
Query: 21 VDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMF 80
+ +P + T +W+ Q+ + + S F ++ G+ D
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHT 242
Query: 81 IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEG 140
+ V++ +T KV + H I + + +L+ S D KLWD G C G
Sbjct: 243 VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNG-KCVATLTG 301
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
H ++ F+ A+AS D T +I++ + L+ H+ ++ + + G+
Sbjct: 302 HDDEILDSCFDYTG-KLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN-- 358
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+L+TGS D TA++WD QT C+Q LEGHT + + F+ + I+ITGS+D T RIW
Sbjct: 359 HLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 243 (90.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 62/270 (22%), Positives = 121/270 (44%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I + T +W+ ++ +F + F + V G+ D ++++
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 209
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
++V H+ I ++ + + +++ S D + +WD + G I GH + +
Sbjct: 210 EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK-VNILIGHCAEISSAS 268
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV--NCVDYFTGGDKPYLITGSD 207
FN D + + S+D+T K+W+ + TL H + +C DY TG + T S
Sbjct: 269 FN-WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDY-TG---KLIATASA 323
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
D TA+++ T+ C+ LEGH +S + F+P+ ++TGS D T RIW A T + L
Sbjct: 324 DGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL 383
Query: 268 NYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ +++ + ++ G + T +
Sbjct: 384 EGHTDEIFSCAFNYKGNIVITGSKDNTCRI 413
Score = 228 (85.3 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 58/175 (33%), Positives = 86/175 (49%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
KV +AH + VA++ + ++ S D KLWD G + EGH + V + FN
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAFNN 144
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ A+ S D+T K+W++ + T H + C+ + + TGS D TAK
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF--NPQSTLVATGSMDTTAK 202
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
+WD Q V TL GH+ + ++ F+ IITGS D TV +W A T R N L
Sbjct: 203 LWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNIL 257
Score = 210 (79.0 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 48/163 (29%), Positives = 80/163 (49%)
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
++ + H + V N K + F + S DRT K+W+ S + TL+ H+ V + +
Sbjct: 86 KVLKAHILPLTNVALN-KSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNN 144
Query: 196 G-GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
GDK + TGS D T K+W +T C T GHT + + F+P+ ++ TGS D T +
Sbjct: 145 PYGDK--IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 255 IWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+W TL + ++ + S RI+ G + T++V
Sbjct: 203 LWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVV 245
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/205 (21%), Positives = 84/205 (40%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L S + S+ + S I+ + TV +W+ + + SA F
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCS 274
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
++ G+ D ++++ V H D I T + ++S D +++
Sbjct: 275 LILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV-N 189
C EGH + +++FNP+ N + S D+T +IW+ + L+ H + +
Sbjct: 335 R-KCIAKLEGHEGEISKISFNPQG-NHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS 392
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVW 214
C + G +ITGS D+T ++W
Sbjct: 393 CAFNYKGN---IVITGSKDNTCRIW 414
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 264 (98.0 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 67/260 (25%), Positives = 121/260 (46%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K LA ++ V SV P+ W+ +S + IW K+ +L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +V+ +DD +++++ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
D + G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 157 DVKTG-KCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-- 243
V+ V + G Y++ + D+T K+WDY C++T H + C +
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKTYTCHKNE--KYCIFANFSVTG 270
Query: 244 ---IITGSEDGTVRIWHATT 260
I++GSED V IW+ T
Sbjct: 271 GKWIVSGSEDNLVYIWNLQT 290
Score = 249 (92.7 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S K+ + V F + +V+G+ D +R+++ T +K A
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V + ++SSS D L ++WD G + + + V V F+P
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
A A+LD T+K+W+ T H+ C+ ++ G K ++++GS+D+ +W+
Sbjct: 230 LA-ATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWN 287
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIW 256
QTK VQ L+GHT V + HP II + + D T+++W
Sbjct: 288 LQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 239 (89.2 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 56/170 (32%), Positives = 88/170 (51%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V P ++ SSS D LIK+W G + GH + V ++ D+N
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWS-SDSNL 101
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
SAS D+T+KIW++ S TL H V C ++ +++GS D + ++WD +
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
T C++TL H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 43 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKLGISDVAW--SS 97
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L++ SDD T K+WD + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YD 291
T + TL + V A+ + + IV YD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 192
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/198 (23%), Positives = 91/198 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM- 296
+ ++++ S+D T++IW ++ + TL V+ + S IV G +DE +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 297 -VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
VK G+ + A D + + + I + + + ++ G+ L + +
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD---- 212
Query: 353 DLYPQS-LKHNPNGRFVV 369
D P S +K +PNG++++
Sbjct: 213 DNPPVSFVKFSPNGKYIL 230
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 264 (98.0 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 69/255 (27%), Positives = 113/255 (44%)
Query: 16 ERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
+ V V+ PS + + TV IW + + F VRS F + Q +V
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTA 121
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+DD ++V++ + + H +++RC P ++S+SDD +KLWD + C
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECV 180
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ H +V V F+P T A+A +D T+K+W+ + H VN + +
Sbjct: 181 HSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP 239
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G+ YLIT S D T K+ D + TL GH + V F +G D V +
Sbjct: 240 SGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 256 WHATTYRLENTLNYG 270
W + +T++YG
Sbjct: 298 WKSNF----DTVDYG 308
Score = 258 (95.9 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 74/291 (25%), Positives = 129/291 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + V VD + + + T+ IW+ + Q+ A F + V F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +G+ D +R++ N + VF AHT +R V ++++SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + H ++V F+P D SAS D+T+K+W+ S + + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V VD+ G + D+T KVWD +T VQ + H+ V+A+ FHP +IT
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T++I RL TL+ + + ++ G + +MV
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 240 (89.5 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 62/254 (24%), Positives = 110/254 (43%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ ++ + F+ V F + + +G+ D + +++ + F H D + C
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ + S S D +++W KG + +F H+ V V F D +AS
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFC-SDGQLLVTASD 123
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+T+K+W+ F+L H V C + G +++ SDD T K+WD ++ CV
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECVH 181
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ H V+ V FHP I D TV++W T+RL V A+ + S
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG 241
Query: 284 RRIVIGYDEGTIMV 297
++ + T+ +
Sbjct: 242 NYLITASSDSTLKI 255
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 280 (103.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 71/239 (29%), Positives = 106/239 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P + ++ TV +W + F+ PVRS F A Q++ ++
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V++ + HT ++RC P ++S S+D IK+WD C
Sbjct: 81 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNN 139
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FNP T ASA D+T+K+W++ H GVNC+ + G
Sbjct: 140 FSDSVGFANFVDFNPSGT-CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 198
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ YLIT S D T K+ D + TL+GHT V V F + +G D V +W
Sbjct: 199 N--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 241 (89.9 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 68/252 (26%), Positives = 115/252 (45%)
Query: 41 IWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTD 100
+WN++ A + + V S +F + + + D +R++ + K F+AHT
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 101 YIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 160
+R V ++ ++S+D IK+W + ++ H+H+V F+P D S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVS 119
Query: 161 ASLDRTIKIWNLGSPD--PNFTLDAHQKG-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
S D+TIKIW+ + NF+ D+ G N VD+ G + + D T KVWD +
Sbjct: 120 CSEDKTIKIWDTTNKQCVNNFS-DS--VGFANFVDFNPSGT--CIASAGSDQTVKVWDVR 174
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
+Q + H+ V+ + FHP +IT S DGT++I RL TL V+ +
Sbjct: 175 VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTV 234
Query: 278 GYMKSSRRIVIG 289
+ K G
Sbjct: 235 SFSKGGELFASG 246
Score = 197 (74.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 52/215 (24%), Positives = 94/215 (43%)
Query: 83 VYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHS 142
++N+ + + H D + V P + S+S D ++LW +K ++ F+ H+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHT 60
Query: 143 HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
V V F+ D A+AS D++IK+W++ ++L H V C + G +
Sbjct: 61 APVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGR--LI 117
Query: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR 262
++ S+D T K+WD K CV + V F+P I + D TV++W +
Sbjct: 118 VSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 177
Query: 263 LENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
L V I + S ++ +GT+ +
Sbjct: 178 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/178 (20%), Positives = 80/178 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + + V+ P I++ T+ IW+ ++ +F + F
Sbjct: 98 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT 157
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+ + D ++V++ ++ ++ H+ + C++ HP+ Y++++S D +K+ D +
Sbjct: 158 CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 217
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
G + + +GH+ V V+F+ K FAS D + +W NF + H KG+
Sbjct: 218 GRLIYTL-QGHTGPVFTVSFS-KGGELFASGGADTQVLLWRT-----NFD-ELHCKGL 267
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 286 (105.7 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 86/321 (26%), Positives = 150/321 (46%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKS-FEVTE-L 58
+ L+LEI+ K+ + + +K +L + P +VC++ +Q+ S + ++
Sbjct: 429 LDLKLEIQ-KVKESRDAIKLDNLQLALP---------SVCMYTFQNTNKDMSCLDFSDDC 478
Query: 59 PVRSAKFVAR--KQWVVAGADDMFIRV-YNYNTMDK---VKVFEAHTDYIRCVAVHPTLP 112
+ +A F K W + G+ + N N D+ K H+ + + P
Sbjct: 479 RIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNK 538
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y+LS S+D ++LW + ++GH+H V V+F+P + FA+AS D+T ++W+
Sbjct: 539 YLLSGSEDKTVRLWSMDTHTALVS-YKGHNHPVWDVSFSPLG-HYFATASHDQTARLWSC 596
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
P H V+CV + G Y+ TGS D T ++WD T V+ GHT V
Sbjct: 597 DHIYPLRIFAGHLNDVDCVSFHPNGC--YVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPV 654
Query: 233 SAVCFHPELPIIITGSEDGTVRIWH-ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYD 291
++ P+ + TGSEDG + +W T RL+ +G ++++ Y K ++ G
Sbjct: 655 ISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGA 714
Query: 292 EGTIMV---KIGREEPVASMD 309
+ T+ V K EP A D
Sbjct: 715 DHTVRVWDLKKATTEPSAEPD 735
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 280 (103.6 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 71/239 (29%), Positives = 106/239 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P + ++ TV +W + F+ PVRS F A Q++ ++
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V++ + HT ++RC P ++S S+D IK+WD C
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNN 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FNP T ASA D+T+K+W++ H GVNC+ + G
Sbjct: 182 FSDSVGFANFVDFNPSGT-CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSG 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ YLIT S D T K+ D + TL+GHT V V F + +G D V +W
Sbjct: 241 N--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 259 (96.2 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 73/286 (25%), Positives = 129/286 (45%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + S+DL P+ + + + + +WN++ A + + V S +F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + D +R++ + K F+AHT +R V ++ ++S+D IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAH 184
+ ++ H+H+V F+P D S S D+TIKIW+ + NF+ D+
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS-DS- 185
Query: 185 QKG-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
G N VD+ G + + D T KVWD + +Q + H+ V+ + FHP
Sbjct: 186 -VGFANFVDFNPSGT--CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 242
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+IT S DGT++I RL TL V+ + + K G
Sbjct: 243 LITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 288
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D F+ ++N+ + + H D + V P + S+S D ++LW +K ++
Sbjct: 39 DTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE- 97
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ H+ V V F+ D A+AS D++IK+W++ ++L H V C + G
Sbjct: 98 FKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG 156
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+++ S+D T K+WD K CV + V F+P I + D TV++W
Sbjct: 157 R--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+L V I + S ++ +GT+ +
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 254
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 278 (102.9 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 73/252 (28%), Positives = 110/252 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ V+ PS + +S TV +W + + F+ VRS F Q +V +D
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++V+ + HT+++RC P + S DD ++LWD C I
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD-TSSHQCINI 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FN T AS+ D TIKIW++ + H GVNC + G
Sbjct: 182 FTDYGGSATFVDFNSSGT-CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ YLI+GS D T K+ D + TL GH V V F + + +G D V +W
Sbjct: 241 N--YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Query: 258 ATTYRLENTLNY 269
T + ++LNY
Sbjct: 299 -TNF---DSLNY 306
Score = 235 (87.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 64/263 (24%), Positives = 116/263 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + + D +P+ + ++ IWN + A F + F
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
V + + D +R++ + + VF+AHT +R V ++++SDD +K+W
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP-NFTLDAHQ 185
E+ + H+++V F+P D AS DRT+++W+ S N D +
Sbjct: 130 GVERKKFLYSL-NRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQCINIFTD-YG 186
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
VD+ + G + + D+T K+WD +T +Q + H V+ FHP +I
Sbjct: 187 GSATFVDFNSSGT--CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLI 244
Query: 246 TGSEDGTVRIWHATTYRLENTLN 268
+GS D T++I RL TL+
Sbjct: 245 SGSSDSTIKILDLLEGRLIYTLH 267
Score = 215 (80.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 59/254 (23%), Positives = 110/254 (43%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ T+ + F+ + + A F + + G+ D + ++N + F HTD I
Sbjct: 6 EDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITG 65
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ V SSS D ++LW KG + +F+ H+ V V F+ +D +AS
Sbjct: 66 VNFAPSGSLVASSSRDQTVRLWTPSIKGE--STVFKAHTASVRSVHFS-RDGQRLVTASD 122
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+++K+W + ++L+ H V C + G + + DD T ++WD + C+
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGR--LIASCGDDRTVRLWDTSSHQCIN 180
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ + + V F+ I + D T++IW T +L V + S
Sbjct: 181 IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG 240
Query: 284 RRIVIGYDEGTIMV 297
++ G + TI +
Sbjct: 241 NYLISGSSDSTIKI 254
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 258 (95.9 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 62/183 (33%), Positives = 101/183 (55%)
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ H+ +++ V + + LS S D ++LWD KG + T++F+GH+ VM V F+ D
Sbjct: 67 KGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKG-VSTRLFKGHTQDVMSVAFS-SDN 124
Query: 156 NTFASASLDRTIKIWN-LGSPDPNFTLD---AHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
S S D TIK+WN LG + FTL+ AHQ V+C+ + + P +++GS D+
Sbjct: 125 RQIISGSRDATIKVWNTLG--ECKFTLEGPEAHQDWVSCIRF--SPNTPTIVSGSWDNKV 180
Query: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLE--N 265
K+WD ++ C TL HT V+ V P+ + +G +D +W ++ Y+LE N
Sbjct: 181 KIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARN 240
Query: 266 TLN 268
T+N
Sbjct: 241 TIN 243
Score = 216 (81.1 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 59/215 (27%), Positives = 100/215 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
R L S V+ V + + L+ + T+ +W+ + F+ V S F +
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVF----EAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
+ +++G+ D I+V+N T+ + K EAH D++ C+ P P ++S S D +K
Sbjct: 124 NRQIISGSRDATIKVWN--TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVK 181
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
+WD K + C H+ YV VT +P D + AS D +W L S P + L+A
Sbjct: 182 IWDI-KSFKCNHTLTDHTGYVNTVTISP-DGSLCASGGKDTFACLWELSSGKPLYKLEAR 239
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
+N + + +K +L +DD +WD TK
Sbjct: 240 NT-INALAF--SPNKYWLSAATDDKII-IWDLLTK 270
Score = 209 (78.6 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 55/179 (30%), Positives = 84/179 (46%)
Query: 98 HTDYIRCVAVHPTLP-YVLSSSDDMLIKLW-----DWEKGWMCTQIFEGHSHYVMQVTFN 151
H ++ +AV P P ++SSS D + +W D + +GHSH+V V +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVIS 79
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
D S S D T+++W++ H + V V + D +I+GS D T
Sbjct: 80 -HDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAF--SSDNRQIISGSRDATI 136
Query: 212 KVWDYQTKSCVQTLEG---HTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
KVW+ C TLEG H VS + F P P I++GS D V+IW +++ +TL
Sbjct: 137 KVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Score = 180 (68.4 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ--KGVN--CVDYFT 195
GH+ +V + +P++ +T S+S D+T+ +W L D AH+ KG + D
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
D + ++GS D+T ++WD + +GHT +V +V F + II+GS D T+++
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 256 WH 257
W+
Sbjct: 139 WN 140
Score = 180 (68.4 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 67/254 (26%), Positives = 112/254 (44%)
Query: 18 VKSVDLHPSEP-WILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS-AKFVARK------ 69
V S+ + P P I++S TV +W + T A S ++ + FV
Sbjct: 24 VTSIAVSPENPDTIISSSRDKTVMVWQL-TPTDATSPGKAHRSLKGHSHFVQDVVISHDG 82
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Q+ ++G+ D +R+++ ++F+ HT + VA ++S S D IK+W+
Sbjct: 83 QFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN-T 141
Query: 130 KGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
G C EG H +V + F+P +T T S S D +KIW++ S N TL H
Sbjct: 142 LG-ECKFTLEGPEAHQDWVSCIRFSP-NTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTG 199
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
VN V G +G D A +W+ + + LE + ++A+ F P ++
Sbjct: 200 YVNTVTISPDGS--LCASGGKDTFACLWELSSGKPLYKLEAR-NTINALAFSPN-KYWLS 255
Query: 247 GSEDGTVRIWHATT 260
+ D + IW T
Sbjct: 256 AATDDKIIIWDLLT 269
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 257 (95.5 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 66/268 (24%), Positives = 123/268 (45%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+K L + + SV P W+ ++ T+ IW ++ E + + +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS 97
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + +DD I++++ + VK + H +Y+ V+ +P ++S S D +++W
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ- 185
D G CT++ HS V V FN +D S S D T++IW+ + T+
Sbjct: 158 DVNTG-ECTKMISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG 215
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT-KSCVQTLEGHTHNVSAVCFHPELPI- 243
K V+ V + G +++ G+ D+T ++W Y K C++T GH + C +
Sbjct: 216 KEVSFVKFSPNGK--FVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNE--KYCIFSTFSVT 271
Query: 244 ----IITGSEDGTVRIWHATTYRLENTL 267
I+TGSED + I++ T + TL
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQTL 299
Score = 251 (93.4 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 67/255 (26%), Positives = 121/255 (47%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L E + + I ++ T+ IW+ +S M K+ + + V F
Sbjct: 79 KFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSF 138
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+G+ D +R+++ NT + K+ AH+D + V + V+S S D +++
Sbjct: 139 NPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDAH 184
WD G + I V V F+P A +LD T+++W+ + T H
Sbjct: 199 WDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG-TLDNTLRLWSYNNNKKCLKTYTGH 257
Query: 185 QKGVNCV-DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ C+ F+ +++TGS+D+ +++ QT+ VQTL GH V V HP I
Sbjct: 258 KNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENI 317
Query: 244 IITGS--EDGTVRIW 256
I +G+ +D +V+IW
Sbjct: 318 IASGALEKDRSVKIW 332
Score = 244 (91.0 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 55/161 (34%), Positives = 87/161 (54%)
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTG 196
+GH + V F+P D ASAS D+TIKIW G+ D F TL+ H++G++ D
Sbjct: 43 KGHLKSISSVKFSP-DGKWLASASADKTIKIW--GAYDGKFERTLEGHKEGIS--DIAWS 97
Query: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
D + + SDD T K+WD ++ V+TL+GH V V F+P+ +I++GS D VRIW
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
T ++ + V + + + +V G +GT+ +
Sbjct: 158 DVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI 198
Score = 241 (89.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 55/173 (31%), Positives = 91/173 (52%)
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ H I V P ++ S+S D IK+W G + EGH + + ++ +D+
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKF-ERTLEGHKEGISDIAWS-QDS 100
Query: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
SAS D+TIKIW++ S TL H++ V V + +++GS D ++WD
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSF--NPQSNLIVSGSFDENVRIWD 158
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
T C + + H+ V+ V F+ + ++++GS DGTVRIW TT +L NT++
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS 211
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/195 (25%), Positives = 88/195 (45%)
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
+TL H K ++ V + G +L + S D T K+W +TLEGH +S + +
Sbjct: 40 YTLKGHLKSISSVKFSPDGK--WLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS 97
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMV 297
+ +I + S+D T++IW + ++ TL E V+ + + S IV G +DE +
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 298 KIGREEPVASMD-NSGKIIWAKHNEIQTVNIK-SVGADYEVTDGERLPLAVKELGTCDLY 355
+ E + +S + N T+ + S + D L + + T D
Sbjct: 158 DVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL-LNTISTEDGK 216
Query: 356 PQS-LKHNPNGRFVV 369
S +K +PNG+FV+
Sbjct: 217 EVSFVKFSPNGKFVL 231
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 279 (103.3 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 73/225 (32%), Positives = 115/225 (51%)
Query: 75 GADDMFIRVYNYNT--MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
G D IRVY+Y + M+ V+ + H + + + Y+ S S D IK+WD +K
Sbjct: 476 GCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQ--YLFSGSSDHSIKVWDLKK-L 532
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVD 192
C EGH V V N D F+ +S D+TIK+W+L + + +TL++H + V +
Sbjct: 533 RCIFTLEGHDKPVHTVLLN--DKYLFSGSS-DKTIKVWDLKTLECKYTLESHARAVKTL- 588
Query: 193 YFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGT 252
+G YL +GS+D T KVWD +T C TL+GHT V+ +C + +GS D T
Sbjct: 589 CISG---QYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKT 643
Query: 253 VRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+R+W+ + TL G +R W + + + D+ TI +
Sbjct: 644 IRVWNLKSLECSATLR-GHDR-WVEHMVICDKLLFTASDDNTIKI 686
Score = 275 (101.9 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 66/227 (29%), Positives = 118/227 (51%)
Query: 34 LYSGT----VCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
L+SG+ + +W+ + + E + PV + + +++ +G+ D I+V++ T+
Sbjct: 515 LFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTV--LLNDKYLFSGSSDKTIKVWDLKTL 572
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ E+H ++ + + Y+ S S+D IK+WD K + C +GH+ +V +
Sbjct: 573 ECKYTLESHARAVKTLCISGQ--YLFSGSNDKTIKVWDL-KTFRCNYTLKGHTKWVTTIC 629
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
TN + S S D+TI++WNL S + + TL H + V ++ DK L T SDD+
Sbjct: 630 I--LGTNLY-SGSYDKTIRVWNLKSLECSATLRGHDRWV---EHMVICDK-LLFTASDDN 682
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
T K+WD +T C TLEGH V + + +I+ S D ++R+W
Sbjct: 683 TIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 244 (91.0 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 69/232 (29%), Positives = 114/232 (49%)
Query: 38 TVCIWNYQSQTM--AKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
++ +++Y+SQ M ++ + E PV S + Q++ +G+ D I+V++ + +
Sbjct: 481 SIRVYDYKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTL 538
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
E H + V ++ Y+ S S D IK+WD K C E H+ V + + +
Sbjct: 539 EGHDKPVHTVLLNDK--YLFSGSSDKTIKVWDL-KTLECKYTLESHARAVKTLCISGQ-- 593
Query: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
F S S D+TIK+W+L + N+TL H K V + G Y +GS D T +VW+
Sbjct: 594 YLF-SGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL--GTNLY--SGSYDKTIRVWN 648
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
++ C TL GH V + +L + T S+D T++IW T R TL
Sbjct: 649 LKSLECSATLRGHDRWVEHMVICDKL--LFTASDDNTIKIWDLETLRCNTTL 698
Score = 169 (64.5 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 52/188 (27%), Positives = 92/188 (48%)
Query: 34 LYSG----TVCIWNYQSQTMAKSFEVTELPVRSAKFVARK-QWVVAGADDMFIRVYNYNT 88
L+SG T+ +W+ + T+ + + E R+ K + Q++ +G++D I+V++ T
Sbjct: 555 LFSGSSDKTIKVWDLK--TLECKYTL-ESHARAVKTLCISGQYLFSGSNDKTIKVWDLKT 611
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
+ HT ++ + + T Y S S D I++W+ K C+ GH +V +
Sbjct: 612 FRCNYTLKGHTKWVTTICILGTNLY--SGSYDKTIRVWNL-KSLECSATLRGHDRWVEHM 668
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
K +AS D TIKIW+L + N TL+ H V C+ + DK +I+ S D
Sbjct: 669 VICDK---LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWE--DKKCVISCSHD 723
Query: 209 HTAKVWDY 216
+ +VW +
Sbjct: 724 QSIRVWGW 731
Score = 153 (58.9 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 154 DTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
D F S D +I++++ S + TL H+ V + Y D+ YL +GS DH+
Sbjct: 470 DNLLFTGCS-DNSIRVYDYKSQNMECVQTLKGHEGPVESICY---NDQ-YLFSGSSDHSI 524
Query: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGL 271
KVWD + C+ TLEGH V V + + + +GS D T+++W T + TL
Sbjct: 525 KVWDLKKLRCIFTLEGHDKPVHTVLLNDKY--LFSGSSDKTIKVWDLKTLECKYTLESHA 582
Query: 272 ERVWAIGYMKSSRRIVIGYDEGTIMV 297
V + S + + G ++ TI V
Sbjct: 583 RAVKTLCI--SGQYLFSGSNDKTIKV 606
Score = 39 (18.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 18/74 (24%), Positives = 29/74 (39%)
Query: 74 AGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV-------AVHPTLPYVLSSSDDMLIKLW 126
A AD F + NT+ ++ T Y+R ++ PTL + IK W
Sbjct: 63 ATADSKFEKFKARNTLADIQYKVGDTLYVRVKKSKPTNDSLLPTLNIAFLDGSERAIK-W 121
Query: 127 DWEK-----GWMCT 135
+++ W CT
Sbjct: 122 EYDPYTTTAQWTCT 135
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 272 (100.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 69/239 (28%), Positives = 105/239 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P + ++ TV +W + F+ PVRS F A Q++ ++
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V++ + HT ++RC P ++S S+D IK+WD C
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNN 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FNP T ASA D+T+K+W++ H GVNC+ +
Sbjct: 182 FSDSVGFANFVDFNPSGT-CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSD 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ YL+T S D T K+ D + TL+GHT V V F + +G D V +W
Sbjct: 241 N--YLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 258 (95.9 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 72/286 (25%), Positives = 129/286 (45%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + S+DL P+ + + + + +WN++ A + + V S +F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + D +R++ + K F+AHT +R V ++ ++S+D IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAH 184
+ ++ H+H+V F+P D S S D+TIKIW+ + NF+ D+
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS-DS- 185
Query: 185 QKG-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
G N VD+ G + + D T KVWD + +Q + H+ V+ + FHP
Sbjct: 186 -VGFANFVDFNPSGT--CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY 242
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
++T S DGT++I RL TL V+ + + K G
Sbjct: 243 LVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 288
Score = 212 (79.7 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 58/186 (31%), Positives = 91/186 (48%)
Query: 88 TMDKV--KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYV 145
T D V + F+ H I + + P + ++S D + LW+++ + + GH V
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYR-YVGHKDVV 63
Query: 146 MQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN--FT-LDAHQKGVNCVDYFTGGDKPYL 202
V F+P N ASAS DRT+++W PD F+ AH V VD+ G +L
Sbjct: 64 TSVQFSPHG-NLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQ--FL 117
Query: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR 262
T S+D + KVW + + +L HTH V F P+ +I++ SED T++IW T +
Sbjct: 118 ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 263 LENTLN 268
N +
Sbjct: 178 CVNNFS 183
Score = 210 (79.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 55/220 (25%), Positives = 97/220 (44%)
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D F+ ++N+ + + H D + V P + S+S D ++LW +K ++
Sbjct: 39 DTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE- 97
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ H+ V V F+ D A+AS D++IK+W++ ++L H V C + G
Sbjct: 98 FKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG 156
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+++ S+D T K+WD K CV + V F+P I + D TV++W
Sbjct: 157 R--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWD 214
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+L V I + S +V +GT+ +
Sbjct: 215 VRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKI 254
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 269 (99.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 67/247 (27%), Positives = 110/247 (44%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
+ A + V V+ PS + + TV IW + + F VRS F +
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Q +V +DD ++V++ + + H +++RC P ++S+SDD +KLWD +
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
C + H +V V F+P T A+AS+D T+K+W++ + H VN
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGT-CIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
+ + G+ YL+T S D T K+ D + TL GH + V F +G
Sbjct: 234 ALSFHPSGN--YLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 250 DGTVRIW 256
D V +W
Sbjct: 292 DEQVMVW 298
Score = 254 (94.5 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 71/291 (24%), Positives = 130/291 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + + SVD + + + + +W+ + Q+ A F + V F
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +G+ D +R++ N + VF AHT +R V ++++SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + H ++V F+P D SAS D+T+K+W+ S + + H
Sbjct: 131 STHRQKFLFSLSQ-HINWVRCARFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V VD+ G + S D+T KVWD +T +Q + H+ V+A+ FHP ++T
Sbjct: 189 FVTYVDFHPSGT--CIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLT 246
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T++I RL TL+ + + ++ G + +MV
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 249 (92.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 64/254 (25%), Positives = 113/254 (44%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ ++ + F+ + S F + + +G+ D + V++ + F H D + C
Sbjct: 7 EDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTC 66
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ + S S D +++W KG + +F H+ V V F D + +AS
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGE--STVFRAHTATVRSVHFC-SDGQSLVTASD 123
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+T+K+W+ F+L H V C + G +++ SDD T K+WD ++ CV
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGR--LIVSASDDKTVKLWDKTSRECVH 181
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ H V+ V FHP I S D TV++W T+RL V A+ + S
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 284 RRIVIGYDEGTIMV 297
++ + T+ +
Sbjct: 242 NYLLTASSDSTLKI 255
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 272 (100.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 67/242 (27%), Positives = 107/242 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V S+ P + ++ TV +W + + F+ PVRS F A Q++V ++
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V++ + HT ++RC P ++S S+D IK+WD C
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK-QCVNN 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V F+P T ASA D ++IW++ H GVNC+ + G
Sbjct: 182 FSDSVGFANFVDFSPNGT-CIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSG 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ L+T S D T K+ D + TL+GHT V V F + + +G D V +W
Sbjct: 241 NS--LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
Query: 258 AT 259
+
Sbjct: 299 TS 300
Score = 253 (94.1 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 72/294 (24%), Positives = 132/294 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + S D P+ I + + + +W+ + A + + V S +F
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + + D +R++ + K F+AHT +R V +++++S+D IK+W
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAH 184
+ ++ H+H+V F+P D S S D+TIKIW+ S NF+ D+
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTSKQCVNNFS-DS- 185
Query: 185 QKG-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
G N VD+ G + + DH ++WD + +Q + H+ V+ + FHP
Sbjct: 186 -VGFANFVDFSPNGT--CIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS 242
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++T S DGTV+I RL TL V+ + + K G + ++V
Sbjct: 243 LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLV 296
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 277 (102.6 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 81/274 (29%), Positives = 126/274 (45%)
Query: 80 FIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW---EKGWMCTQ 136
FI V + + V E HTD + + ++ + + D ++LW+ + + C
Sbjct: 345 FIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIH 404
Query: 137 IFEGHSHYVMQVTFNPKDTN---TF-ASASLDRTIKIWNLGSP--DPNF------TLDAH 184
+F GH+ V V P D N TF AS+S DRT+K +NLGS +F T+ AH
Sbjct: 405 VFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAH 464
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
+ VN + D + + S D T K+WD T V L GH V A F+P +
Sbjct: 465 DRDVNAIQ--VSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQL 522
Query: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREE 303
+GS D T+RIW+ T + TL + + Y+ ++V +G + V + E
Sbjct: 523 ASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT 337
VA++DN +WA + + S GAD V+
Sbjct: 583 CVATLDNHEDRVWALASRFDGSLLVSGGADAVVS 616
Score = 251 (93.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 73/253 (28%), Positives = 121/253 (47%)
Query: 71 WVVAGADDMFIRVYNYNTMDKV----KVFEAHTDYIRCVAVHPT----LP-YVLSSSDDM 121
W+ GA D +R++N N D V VF HT + VA+ P P ++ SSS D
Sbjct: 378 WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDR 437
Query: 122 LIKLWDW----EKGWMCTQI---FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
+K ++ K + + H V + + KD ASAS D+TIK+W+ +
Sbjct: 438 TLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVS-KDGRIIASASQDKTIKLWDSST 496
Query: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSA 234
+ L H++GV + + L +GS D T ++W+ T+ CVQTLEGHT +
Sbjct: 497 GEVVGVLRGHRRGVWACSFNPFSRQ--LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILK 554
Query: 235 VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGT 294
+ + + +++ + DG V++W ++ TL+ +RVWA+ +V G +
Sbjct: 555 LIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAV 614
Query: 295 IMV-KIGREEPVA 306
+ V K EE +A
Sbjct: 615 VSVWKDVTEEYIA 627
Score = 182 (69.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 46/190 (24%), Positives = 90/190 (47%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
++A + +Y + ++K +AH + + + PT + + + L+K+WD
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTF--ASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
++ T F GH + + F K NT+ AS + D +++W+L S + H +
Sbjct: 136 YV-THSFRGHGGVISALCFG-KHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIR 193
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF---HPELPIIIT 246
+ + G +L++GS D T +VW+ + +S V+T+ H+V A+ + PE I+ T
Sbjct: 194 GLTFEPTGS--FLLSGSRDKTVQVWNIKKRSAVRTIPVF-HSVEAIGWVNGQPEEKILYT 250
Query: 247 GSEDGTVRIW 256
E + W
Sbjct: 251 AGEGNLILAW 260
Score = 162 (62.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 48/206 (23%), Positives = 86/206 (41%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
++A+ S + I+ S KS + E PV + + G + ++V++
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 90 DKVKVFEAHTDYIR--CVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQ 147
F H I C H + S +DD ++LWD +FEGHS +
Sbjct: 136 YVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSS-RSMAVFEGHSSVIRG 194
Query: 148 VTFNPKDTNTFA-SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG-DKPYLITG 205
+TF P T +F S S D+T+++WN+ T+ V + + G ++ L T
Sbjct: 195 LTFEP--TGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTA 251
Query: 206 SDDHTAKVWDYQTKSCVQTLEGHTHN 231
+ + WD+++ S + TH+
Sbjct: 252 GEGNLILAWDWKSGSRLDPGVDTTHS 277
Score = 160 (61.4 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 41/201 (20%), Positives = 92/201 (45%)
Query: 100 DYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTF- 158
DY+ +A+ ++++ L+ +++ G + + H V+ +T +P TNT
Sbjct: 62 DYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSM-KAHETPVITMTIDP--TNTLL 118
Query: 159 ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
A+ + +K+W++ + H ++ + + + L +G+DD ++WD +
Sbjct: 119 ATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNS 178
Query: 219 KSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIG 278
+ EGH+ + + F P +++GS D TV++W+ T+ V AIG
Sbjct: 179 SRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPV-FHSVEAIG 237
Query: 279 YMKSS--RRIVIGYDEGTIMV 297
++ +I+ EG +++
Sbjct: 238 WVNGQPEEKILYTAGEGNLIL 258
Score = 132 (51.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 57/237 (24%), Positives = 94/237 (39%)
Query: 29 WILAS-LYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYN 87
W+LAS V +W+ S FE +R F ++++G+ D ++V+N
Sbjct: 160 WVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 88 TMDKVKVFEA-HT-DYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ-IFEGHS-- 142
V+ H+ + I V P + ++ + LI WDW+ G + HS
Sbjct: 220 KRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSET 279
Query: 143 HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV--NCVDYFTGGDKP 200
+ ++QV P NT S D ++ + P F G +D GD
Sbjct: 280 NAIIQVV--PFSENTLLSVHSDLSLLL-RKRVPGEGFITIKKLNGSFDEVIDCAWIGDD- 335
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+L S+ V LEGHT V + + + TG++D TVR+W+
Sbjct: 336 HLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWN 392
Score = 131 (51.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
+P IK A + V ++ + P+ + G V +W+ + SF V
Sbjct: 90 IPSGRRIKSMKAHETP-VITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFR-GHGGV 147
Query: 61 RSAKFVARKQ--WVVA-GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS 117
SA + Q WV+A GADD +R+++ N+ + VFE H+ IR + PT ++LS
Sbjct: 148 ISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSG 207
Query: 118 SDDMLIKLWDWEK 130
S D +++W+ +K
Sbjct: 208 SRDKTVQVWNIKK 220
Score = 50 (22.7 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 770 IVAIWRKDLQKVNPKAAESL---ADPEEYSNLFD---DWQVALAV 808
+V++W+ ++ K AE L + E+ + F+ DWQ A+A+
Sbjct: 614 VVSVWKDVTEEYIAKQAEELERRVEAEQLLSNFEQTEDWQQAIAL 658
Score = 41 (19.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 643 DYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMS 680
+Y + A +L R A+++ + + W+Q LA+S
Sbjct: 624 EYIAKQAEELERRVEAEQLLSNFEQTEDWQQAIALALS 661
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 268 (99.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 85/337 (25%), Positives = 154/337 (45%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + + S+D PS I + +V +WN + Q+ A F + V +F
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + D +R++ + + +F AHT +R V +L++SDD IKLW
Sbjct: 70 PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + E H+++V F+P D S S DRT+K+W+ S T
Sbjct: 130 SVHRQKIICTLRE-HNNWVRCARFSP-DGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGG 187
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
+ VD+ + T S D+T +VWD +T + +Q + H+ V+A+ FHP ++T
Sbjct: 188 YSSYVDFHPSST--CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLT 245
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVA 306
S D T++I RL TL+ + + +S + + +MV R
Sbjct: 246 ASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMV--WRTN-FD 302
Query: 307 SMDNSGKIIWAKHNEIQTVNIKSVGA--DYEVTDGER 341
S+D S +++ K + +T + ++ GA D E G++
Sbjct: 303 SVDYS-RVLQQKRDH-RTPSAQASGAAGDPESRSGQK 337
Score = 256 (95.2 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 67/251 (26%), Positives = 112/251 (44%)
Query: 48 TMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAV 107
T+ ++F+ + S F + + +G+ D + V+N + F H D + CV
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQF 68
Query: 108 HPTLPYVLSSSDDMLIKLW-DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRT 166
P+ + SSS D ++LW KG + +F H+ V V F+ D + +AS D++
Sbjct: 69 SPSAHLLASSSRDKTVRLWVPSVKGE--SVLFRAHTGSVRSVCFSA-DGQSLLTASDDQS 125
Query: 167 IKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
IK+W++ TL H V C + G +++ SDD T K+WD ++ + T
Sbjct: 126 IKLWSVHRQKIICTLREHNNWVRCARFSPDGQ--LMVSVSDDRTVKLWDASSRQLIHTFC 183
Query: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRI 286
S V FHP I T S D TVR+W T+ L V A+ + S +
Sbjct: 184 EPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHL 243
Query: 287 VIGYDEGTIMV 297
+ + T+ +
Sbjct: 244 LTASSDSTLKI 254
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 273 (101.2 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 77/296 (26%), Positives = 140/296 (47%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ V P ++ SG +WN + + + VRS + + W+V+G D
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDD 187
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDY-IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
I+ + N M+ VK+F+AH IR ++ PT + S +DD +IK+WD+ + CT+
Sbjct: 188 SGNIKYWQPN-MNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFAR---CTE 243
Query: 137 IFE--GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
+ GH V V+++P+ + S D IKIW+ S TL H+ V+ V++
Sbjct: 244 DNQLVGHGWDVKCVSWHPQKS-LIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWN 302
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTV 253
G+ ++++ S D KV+D +T +QT +GH V+A+ HP + ++G +DG +
Sbjct: 303 QNGN--WIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKI 360
Query: 254 RIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASM 308
W + ++ + VW++ + + G ++ T R P +M
Sbjct: 361 LYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW-SRNRPADTM 415
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 64/277 (23%), Positives = 123/277 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
S+ + S + P+ + + +V G+ ++N T + + +AH +R +
Sbjct: 114 SRFIHTSSNKVKYPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSI 173
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQ-VTFNPKDTNTFASASLD 164
+++S D IK W + +IF+ H ++ ++F+P D AS + D
Sbjct: 174 IWSHNEDWMVSGDDSGNIKYW--QPNMNNVKIFKAHEQSKIRGLSFSPTDLK-LASCADD 230
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
+ IKIW+ + L H V CV + K +++G D+ K+WD ++ + T
Sbjct: 231 KIIKIWDFARCTEDNQLVGHGWDVKCVSWHP--QKSLIVSGGKDNNIKIWDAKSSQNITT 288
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN-YGLERVWAIGYMKSS 283
L GH VS V ++ I++ S D ++++ T + T +G E V A+
Sbjct: 289 LHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKE-VTALALHPYH 347
Query: 284 RRIVIGYD-EGTIMVKI-GREEPVASMDNSGKI-IWA 317
+ + D +G I+ I G EP A + ++ +W+
Sbjct: 348 EDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWS 384
Score = 193 (73.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 57/248 (22%), Positives = 108/248 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVARK 69
L V+S+ +E W+++ SG + W + K F+ E +R F
Sbjct: 163 LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQ-PNMNNVKIFKAHEQSKIRGLSFSPTD 221
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+ + ADD I+++++ + H ++CV+ HP ++S D IK+WD +
Sbjct: 222 LKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAK 281
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
T + GH V +V +N ++ N SAS D+ +K++++ + T H K V
Sbjct: 282 SSQNITTL-HGHKSTVSKVEWN-QNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVT 339
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ + + ++G D W + + H +V ++ +HP I+ +GS
Sbjct: 340 ALALHPYHEDLF-VSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGS 398
Query: 249 EDGTVRIW 256
D T + W
Sbjct: 399 NDHTTKFW 406
Score = 125 (49.1 bits), Expect = 0.00043, P = 0.00043
Identities = 63/295 (21%), Positives = 117/295 (39%)
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
I CV+ P +++ S LW+ + I + H V + ++ + + S
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLT-FNFETILQAHDSAVRSIIWSHNE-DWMVSG 185
Query: 162 SLDRTIKIWNLGSPDPNFT--LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
IK W P+ N AH++ F+ D L + +DD K+WD+
Sbjct: 186 DDSGNIKYWQ---PNMNNVKIFKAHEQSKIRGLSFSPTDLK-LASCADDKIIKIWDFARC 241
Query: 220 SCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY 279
+ L GH +V V +HP+ +I++G +D ++IW A + + TL+ V + +
Sbjct: 242 TEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEW 301
Query: 280 MKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKIIWAK-----HNEIQTVNIKSVGAD 333
++ IV + + V I + + + GK + A H ++ K
Sbjct: 302 NQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKIL 361
Query: 334 YEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAW-RNR 387
Y + + D++ SL +P G ++ G ++ T W RNR
Sbjct: 362 YWIVGNPEPQAEIHSAHDADVW--SLSWHPIGH-ILASGSNDH---TTKFWSRNR 410
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 273 (101.2 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 71/246 (28%), Positives = 107/246 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V S+ P + ++ TV +W + + F+ PVRS F A Q +V ++
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE 122
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I+V++ + HT ++RC P ++S S+D IK+WD C
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNN 181
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F + V FNP T ASA D +KIW++ H GVNC+ + G
Sbjct: 182 FSDSVGFANFVDFNPNGT-CIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLG 240
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ L+T S D T K+ D + TL+GHT V V F + ++ +G D V IW
Sbjct: 241 NS--LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
Query: 258 ATTYRL 263
L
Sbjct: 299 TNFIHL 304
Score = 244 (91.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 70/294 (23%), Positives = 132/294 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + S D P+ I + + + +W+ + A + + V S +F
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + + D +R++ + K F+AHT +R V ++++S+D IK+W
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAH 184
+ ++ H+H+V F+P D S S D+TIKIW+ + NF+ D+
Sbjct: 130 SMFRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS-DS- 185
Query: 185 QKG-VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
G N VD+ G + + DH K+WD + +Q + H+ V+ + FHP
Sbjct: 186 -VGFANFVDFNPNGT--CIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS 242
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++T S DGTV++ RL TL V+ + + K + G + +++
Sbjct: 243 LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLI 296
Score = 40 (19.1 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 737 GKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYS 796
GK ED + + +PE + P VS++ + + L+ V A++L E
Sbjct: 381 GKGEDICRYFLNPLLMPECSSTTVKKRPEDVSDVPS---ESLRSVPLAVADALEHIMEQL 437
Query: 797 NLFDDWQVALAVESKAAAT 815
N+ Q +E + + T
Sbjct: 438 NILT--QTVSILEQRLSLT 454
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 266 (98.7 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 66/236 (27%), Positives = 108/236 (45%)
Query: 21 VDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMF 80
+ +P + T +W+ QS + + S F ++ G+ D
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT 242
Query: 81 IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEG 140
+ V+ +T KV H I + +L+ S D KLWD G C G
Sbjct: 243 VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG-KCVATLTG 301
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
H ++ F+ A+AS D T +I++ + + L+ H+ ++ + + G++
Sbjct: 302 HDDEILDSCFDYTG-KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR- 359
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+TGS D TA++WD QT C+Q LEGHT + + F+ + IIITGS+D T RIW
Sbjct: 360 -LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 233 (87.1 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 62/270 (22%), Positives = 121/270 (44%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I + T +W+ ++ +F + F + V G+ D ++++ +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
++V H+ I ++ + + +++ S D + +W+ + G + GH +
Sbjct: 210 EEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI-GHCAEISSAV 268
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV--NCVDYFTGGDKPYLITGSD 207
FN D + + S+D+T K+W+ + TL H + +C DY TG + T S
Sbjct: 269 FN-WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDY-TG---KLIATASA 323
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
D TA+++ T+ CV LEGH +S + F+P+ ++TGS D T RIW A T + L
Sbjct: 324 DGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL 383
Query: 268 NYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ +++ + I+ G + T +
Sbjct: 384 EGHTDEIFSCAFNYKGDIIITGSKDNTCRI 413
Score = 223 (83.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 58/175 (33%), Positives = 86/175 (49%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
KV AH + VA++ + ++ S D KLWD G + EGH + V + FN
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-EGHRNVVYAIAFNN 144
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ A+ S D+T K+W++ + T H + C+ + + TGS D TAK
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF--NPQSTLVATGSMDTTAK 202
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
+WD Q+ V TL GH+ + ++ F+ IITGS D TV +W A T R TL
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL 257
Score = 211 (79.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 48/163 (29%), Positives = 79/163 (48%)
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
++ H + V N K + F + S DRT K+W+ S + TL+ H+ V + +
Sbjct: 86 KVLRAHILPLTNVALN-KSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 196 G-GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
GDK + TGS D T K+W +T C T GHT + + F+P+ ++ TGS D T +
Sbjct: 145 PYGDK--IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 255 IWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+W + TL + ++ + S RI+ G + T+ V
Sbjct: 203 LWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 46/206 (22%), Positives = 89/206 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTE--LPVRSAKFVAR 68
L S + S+ + S I+ + TV +W ++ T K + + + SA F
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVW--EADTGRKVYTLIGHCAEISSAVFNWD 272
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
++ G+ D ++++ V H D I T + ++S D +++
Sbjct: 273 CSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 332
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
T++ EGH + +++FNP+ N + S D+T +IW+ + L+ H +
Sbjct: 333 ATRECVTKL-EGHEGEISKISFNPQG-NRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEI 390
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVW 214
+ GD +ITGS D+T ++W
Sbjct: 391 FSCAFNYKGD--IIITGSKDNTCRIW 414
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 260 (96.6 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 66/241 (27%), Positives = 106/241 (43%)
Query: 16 ERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
+ V V+ PS + + TV IW + + F VRS F + Q V
Sbjct: 93 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTA 152
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+DD I+V++ + + H +++RC P ++S+SDD +KLWD + C
Sbjct: 153 SDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECV 211
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ H +V V F+P T A+A +D T+K+W++ + H VN + +
Sbjct: 212 HSYCEHGGFVTYVDFHPSGT-CVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP 270
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G+ YL+T S D T K+ D + TL GH + V F +G D V +
Sbjct: 271 SGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 328
Query: 256 W 256
W
Sbjct: 329 W 329
Score = 250 (93.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 65/254 (25%), Positives = 112/254 (44%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ ++ + F+ V F + + +G+ D + V++ + F H D + C
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 97
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ + S S D +++W KG + +F H+ V V F D +F +AS
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFC-SDGQSFVTASD 154
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+TIK+W+ F+L H V C + G +++ SDD T K+WD ++ CV
Sbjct: 155 DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECVH 212
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ H V+ V FHP + D TV++W T+RL V A+ + S
Sbjct: 213 SYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 272
Query: 284 RRIVIGYDEGTIMV 297
+V + T+ +
Sbjct: 273 NYLVTASSDSTLKI 286
Score = 242 (90.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 71/291 (24%), Positives = 127/291 (43%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + V VD + + + + +W+ + Q+ A F + V F
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +G+ D +R++ N + VF AHT +R V +++SDD IK+W
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + H ++V F+P D SAS D+T+K+W+ S + + H
Sbjct: 162 STHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 219
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V VD+ G + D+T KVWD +T +Q + H+ V+A+ FHP ++T
Sbjct: 220 FVTYVDFHPSGT--CVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 277
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T++I RL TL+ + + ++ G + +MV
Sbjct: 278 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 328
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 264 (98.0 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 66/247 (26%), Positives = 108/247 (43%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
+ A + V V+ PS + + TV IW + + F VRS F +
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Q V +DD ++V++ + + H +++RC P ++S+SDD +KLWD +
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
C + H +V V F+P T A+A +D T+K+W++ + H VN
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
+ + G+ YL+T S D T K+ D + TL GH + V F +G
Sbjct: 234 ALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 250 DGTVRIW 256
D V +W
Sbjct: 292 DEQVMVW 298
Score = 255 (94.8 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ ++ + F+ V S F + + +G+ D + V++ + F H D + C
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ + S S D +++W KG + +F H+ V V F D +F +AS
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFC-SDGQSFVTASD 123
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+T+K+W+ F+L H V C + G +++ SDD T K+WD ++ CV
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECVH 181
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ H V+ V FHP I D TV++W T+RL V A+ + S
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 284 RRIVIGYDEGTIMV 297
+V + T+ +
Sbjct: 242 NYLVTASSDSTLKI 255
Score = 254 (94.5 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 72/291 (24%), Positives = 128/291 (43%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + V SVD + + + + +W+ + QT A F + V F
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +G+ D +R++ N + VF AHT +R V +++SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + H ++V F+P D SAS D+T+K+W+ S + + H
Sbjct: 131 STHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V VD+ G + D+T KVWD +T +Q + H+ V+A+ FHP ++T
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVT 246
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T++I RL TL+ + + ++ G + +MV
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 252 (93.8 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 76 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 135
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 136 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 195
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 196 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 255
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 256 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 313
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 314 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 238 (88.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 99
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 100 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 157
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 217
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 218 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 255
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 156 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 214
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 215 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 274
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 335 VDQTVKV 341
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 118 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 177
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 178 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 237
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 295
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 296 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 343
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 267 (99.0 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 75/268 (27%), Positives = 130/268 (48%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
TV +W+ S+ + V F R+ +V+G+ D I ++++ +KV+
Sbjct: 242 TVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFG 301
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK---GWMCTQIFEGHSHYVMQVTFNPKD 154
HTD + V V Y++SSS D ++W + C + GH V V ++ K
Sbjct: 302 HTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSK- 358
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
T +AS DRT++ W++ + + AHQ+G+ C Y G ++++GS D T +++
Sbjct: 359 TGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY-NG---KFIVSGSSDLTIRIF 414
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR----LENTLN-- 268
+ + ++ L+GH + V F+ E I++G DGTVRIW+ T L N+ N
Sbjct: 415 EASSGKLLRMLQGHEDLIRTVRFNDEK--IVSGGYDGTVRIWNFNTGEQHCVLHNSRNSR 472
Query: 269 -YGLE--RVWAIGYMKSSRRIVIGYDEG 293
+GL+ I SS +V +D+G
Sbjct: 473 VFGLQFDHRRIIACTHSSEILVWNFDDG 500
Score = 217 (81.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 56/230 (24%), Positives = 108/230 (46%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+ D + V++ N+ + H+ + C+ ++S S D I +WDW+
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNR 293
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN----FTLDAHQKG 187
+++ GH+ V+ V + N S+S D T ++W L + P L H
Sbjct: 294 -RPLKVYFGHTDNVLGVVVSE---NYIISSSRDHTARVWRLDATSPAEACMHVLRGHLAS 349
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
VN V Y ++T S D T + WD T C++ + H ++ ++ + I++G
Sbjct: 350 VNSVQY--SSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKF--IVSG 405
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T+RI+ A++ +L L + + + + + +IV G +GT+ +
Sbjct: 406 SSDLTIRIFEASSGKLLRMLQGHEDLIRTVRF--NDEKIVSGGYDGTVRI 453
Score = 186 (70.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 52/170 (30%), Positives = 81/170 (47%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
F A D + CV + ++S S D + +WD ++ +++ GHS V+ + F +
Sbjct: 217 FRATLDSVYCVQYDDEI--MVSGSKDRTVSVWDVNSRFILYKLY-GHSGSVLCLDFCRR- 272
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
N S S D TI IW+ + P H V V + Y+I+ S DHTA+VW
Sbjct: 273 RNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV----SENYIISSSRDHTARVW 328
Query: 215 DYQTKS----CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
S C+ L GH +V++V + + +I+T S D T+R W TT
Sbjct: 329 RLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITT 378
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 47/220 (21%), Positives = 90/220 (40%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKS-FEVTELPVRSAKFVAR 68
KL S V +D +++ T+ IW++Q++ K F T+ V
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTD---NVLGVVVS 312
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVK----VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
+ ++++ + D RV+ + + V H + V ++++S D ++
Sbjct: 313 ENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLR 372
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD G C +I H + +N K S S D TI+I+ S L H
Sbjct: 373 TWDITTGH-CIRIIHAHQRGIACAQYNGK---FIVSGSSDLTIRIFEASSGKLLRMLQGH 428
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT--KSCV 222
+ + V + D+ +++G D T ++W++ T + CV
Sbjct: 429 EDLIRTVRF---NDEK-IVSGGYDGTVRIWNFNTGEQHCV 464
Score = 45 (20.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 457 RLIRRIDVT----VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLD--SGKPVDE-Q 509
R +R D+T ++ ++ G +A A +I+ + D+ + SGK + Q
Sbjct: 369 RTLRTWDITTGHCIRIIHAHQRG--IACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQ 426
Query: 510 GVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCV 548
G ED + +E++ +G + G I+N ++ +CV
Sbjct: 427 GHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGE-QHCV 464
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 268 (99.4 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 78/276 (28%), Positives = 129/276 (46%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 544
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 545 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 601
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 602 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 654
Query: 210 TAKVWDYQTKSCVQTLEG-HTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYR-LEN-- 265
T K+WD +T C+QTL+G H H + C +IT S+DGTV++W T + N
Sbjct: 655 TVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLV 714
Query: 266 TLNYGLER--VWAIGYMKSSRRIVIGYDEGTIMVKI 299
TL G VW I + +G GT K+
Sbjct: 715 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 750
Score = 254 (94.5 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 73/272 (26%), Positives = 127/272 (46%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 540
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 541 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 596
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 597 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 650
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTIMV---KIG--- 300
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+ + + G
Sbjct: 651 NADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFI 710
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGA 332
R SG ++W I+ N K V A
Sbjct: 711 RNLVTLESGGSGGVVW----RIRASNTKLVCA 738
Score = 227 (85.0 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 504
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 505 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 560
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 561 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 614
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 615 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 658
Score = 191 (72.3 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 417 NWRRGDLKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 474
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 475 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 528
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 529 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 578
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 256 (95.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 66/241 (27%), Positives = 105/241 (43%)
Query: 16 ERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
+ V V+ PS + + TV IW + + F VRS F + Q V
Sbjct: 24 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA 83
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+DD ++V+ + + H +++RC P ++S+SDD +KLWD + C
Sbjct: 84 SDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSRECV 142
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ H +V V F+P T A+A +D T+K+W++ + H VN + +
Sbjct: 143 HSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP 201
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G+ YLIT S D T K+ D + TL GH + V F +G D V +
Sbjct: 202 SGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 259
Query: 256 W 256
W
Sbjct: 260 W 260
Score = 235 (87.8 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 59/221 (26%), Positives = 97/221 (43%)
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQ 136
D + V++ + F H D + CV P+ + S S D +++W KG +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--ST 59
Query: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
+F H+ V V F D +F +AS D+T+K+W F+L H V C +
Sbjct: 60 VFRAHTATVRSVHFC-SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 118
Query: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
G +++ SDD T K+WD ++ CV + H V+ V FHP I D TV++W
Sbjct: 119 GR--LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
T+RL V + + S ++ + T+ +
Sbjct: 177 DVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 235 (87.8 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 66/257 (25%), Positives = 115/257 (44%)
Query: 41 IWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTD 100
+W+ + Q+ A F + V F + +G+ D +R++ N + VF AHT
Sbjct: 7 VWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTA 66
Query: 101 YIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 160
+R V +++SDD +K+W + + + H ++V F+P D S
Sbjct: 67 TVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVS 124
Query: 161 ASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
AS D+T+K+W+ S + + H V VD+ G + D+T KVWD +T
Sbjct: 125 ASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHR 182
Query: 221 CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
+Q + H+ V+ + FHP +IT S D T++I RL TL+ + +
Sbjct: 183 LLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 242
Query: 281 KSSRRIVIGYDEGTIMV 297
++ G + +MV
Sbjct: 243 RTGEYFASGGSDEQVMV 259
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/250 (21%), Positives = 98/250 (39%)
Query: 163 LDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV 222
+D + +W++ + H+ V CV++ G L +GS D T ++W K
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPNVKGES 58
Query: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKS 282
HT V +V F + +T S+D TV++W + +L+ + V +
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 118
Query: 283 SRRIVIGYDEGTIMV--KIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGE 340
R IV D+ T+ + K RE + ++ G + + + T I + G D V +
Sbjct: 119 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWD 177
Query: 341 -RLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG-DGEYIIYTALAWR-----NRSFGSAL 393
R ++ L +P+G +++ D I + R + G A
Sbjct: 178 VRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT 237
Query: 394 EFVWSSDGEY 403
+S GEY
Sbjct: 238 TVAFSRTGEY 247
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 260 (96.6 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 57/164 (34%), Positives = 88/164 (53%)
Query: 94 VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPK 153
+ H + I V HP+ ++S+S+D IK+WD+E G + +GH++ V + F+ K
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEF-ERTLKGHTNAVQDIDFD-K 158
Query: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
N AS S D TIK+W+ + D TL H V+CV + GD+ LI+ S D T KV
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIKV 216
Query: 214 WDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
W+ T C++TL GH V + + I + S D T++ W+
Sbjct: 217 WEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 235 (87.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 67/245 (27%), Positives = 117/245 (47%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ SV HPS ++++ T+ +W+++S ++ + V+ F + + +
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSA 168
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D+ I+++++ T D VK H + CV P+ ++SSS D IK+W+ G+ C +
Sbjct: 169 DLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGY-CIKT 227
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH +V ++T + +D + AS S D+TIK WN+ + T H V C+ + T
Sbjct: 228 LVGHEDWVRKITVS-EDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN 286
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
I GS T + KS V+ +G N+ C + + TGS D T++IW
Sbjct: 287 IID--IPGSLLSTP-----EGKSKVK--QGPGGNLVGQCGY-----LATGSRDKTIKIWE 332
Query: 258 ATTYR 262
T R
Sbjct: 333 LATGR 337
Score = 235 (87.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 72/264 (27%), Positives = 118/264 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSG-TVCIWNYQSQTMAKSFEVTELPVRSAK 64
E +R L + V+ +D + +LAS + T+ +W++Q+ K+ + V +
Sbjct: 139 EFERTLKGHTNAVQDIDFDKTGN-LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVR 197
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F +++ + D I+V+ T +K H D++R + V + S S+D IK
Sbjct: 198 FTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIK 257
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
W+ KG C + HSH V + F+ + SL L +P+ +
Sbjct: 258 TWNIVKG-ECLATYREHSHVVECLAFSTANIIDIPG-SL--------LSTPEGKSKVKQG 307
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
G N V G YL TGS D T K+W+ T C+ T GH + V AV FHP +
Sbjct: 308 PGG-NLV-----GQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFL 361
Query: 245 ITGSEDGTVRIWHATTYRLENTLN 268
++ +D T+R+W R T+N
Sbjct: 362 LSVGDDKTIRVWDIAQGRCIKTIN 385
Score = 231 (86.4 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 50/124 (40%), Positives = 69/124 (55%)
Query: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
I GH + + V F+P + SAS D TIK+W+ S + TL H V +D+
Sbjct: 101 ILTGHRNCINSVKFHPS-FSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKT 159
Query: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
G+ L + S D T K+WD+QT CV+TL GH HNVS V F P +I+ S D T+++W
Sbjct: 160 GN--LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 257 HATT 260
A T
Sbjct: 218 EAAT 221
Score = 166 (63.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 59/250 (23%), Positives = 106/250 (42%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
+ L V V PS +++S T+ +W + K+ E VR
Sbjct: 184 KTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSED 243
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
+ + ++D I+ +N + + + H+ + C+A + ++ D+ L
Sbjct: 244 GSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA------FSTANIIDIPGSLLST 297
Query: 129 EKGWMCTQIFEGHS-HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+G +++ +G + V Q + A+ S D+TIKIW L + T H
Sbjct: 298 PEGK--SKVKQGPGGNLVGQCGY-------LATGSRDKTIKIWELATGRCLATYIGHDNW 348
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-EGHTHNVSAVCFHPELPIIIT 246
V V + G +L++ DD T +VWD C++T+ E HTH +S + F P I T
Sbjct: 349 VRAVRFHPCGK--FLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIAT 406
Query: 247 GSEDGTVRIW 256
G D +++W
Sbjct: 407 GGVDDVIKVW 416
Score = 139 (54.0 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y+ + S D IK+W+ G C + GH ++V V F+P S D+TI++W++
Sbjct: 318 YLATGSRDKTIKIWELATG-RCLATYIGHDNWVRAVRFHPCG-KFLLSVGDDKTIRVWDI 375
Query: 173 GSPDPNFTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
T+ +AH ++C+D+ P++ TG D KVW Q
Sbjct: 376 AQGRCIKTINEAHTHFISCLDFCL--HNPHIATGGVDDVIKVWKLQ 419
Score = 138 (53.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
++ G+ D I+++ T + + H +++R V HP ++LS DD I++WD +
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
G I E H+H++ + F + + A+ +D IK+W L
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPH-IATGGVDDVIKVWKL 418
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
L P L H+ +N V + +++ S+D T KVWD+++ +TL+GHT+
Sbjct: 93 LPRPPEKHILTGHRNCINSVKFHPSFS--LMVSASEDATIKVWDFESGEFERTLKGHTNA 150
Query: 232 VSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYD 291
V + F ++ + S D T+++W TY TL+ V + + S +++
Sbjct: 151 VQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSR 210
Query: 292 EGTIMV 297
+ TI V
Sbjct: 211 DKTIKV 216
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 253 (94.1 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 81/282 (28%), Positives = 128/282 (45%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP--- 59
+ ++ ++ L +V D P + I++S G + IW+ + T K VT +P
Sbjct: 58 VNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWD--AFTTNKEHAVT-MPTTW 114
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMD----KVKVFEAHTDYIRCVAVHPTLPY-V 114
+ + + +V G D + VY + + K + HT Y+ C ++P +
Sbjct: 115 IMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSC-CIYPNSDQQI 173
Query: 115 LSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT-NTFASASLDRTIKIWNLG 173
L+ S D LWD E G + Q F GHS VM + P +T NTF S S DR IW++
Sbjct: 174 LTGSGDSTCALWDVESGQLL-QSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR 232
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT--KSCVQTLEGHTHN 231
S + + HQ VN V + GD + TGSDD + +++D + + V E
Sbjct: 233 SGHVVQSFEGHQSDVNSVKFHPCGDA--IATGSDDSSCRLYDMRADREVAVFAKESIIFG 290
Query: 232 VSAVCFHPELPIIITGSEDGTVRIWHATTYRLENT-LNYGLE 272
V++V F ++ G D TV +W T + E L YG E
Sbjct: 291 VNSVDFSVSGRLLFAGYNDYTVNLWD--TLKSERVCLLYGHE 330
Score = 192 (72.6 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 54/192 (28%), Positives = 92/192 (47%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSDDMLIKLWD 127
Q ++ G+ D +++ + ++ F H+ + + + P T +S S D + +WD
Sbjct: 171 QQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWD 230
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK- 186
G + Q FEGH V V F+P + A+ S D + +++++ + D + A +
Sbjct: 231 MRSGHV-VQSFEGHQSDVNSVKFHPCG-DAIATGSDDSSCRLYDMRA-DREVAVFAKESI 287
Query: 187 --GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
GVN VD+ G L G +D+T +WD V L GH + VS V P+ +
Sbjct: 288 IFGVNSVDFSVSGR--LLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTAL 345
Query: 245 ITGSEDGTVRIW 256
TGS D T+R+W
Sbjct: 346 STGSWDYTIRVW 357
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 52/235 (22%), Positives = 103/235 (43%)
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
K+ +++ + D + +++ T +K T +I A P+ +V D + ++
Sbjct: 82 KRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPI 141
Query: 129 --EKGWMCTQIFEG-HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
++ + G H+ Y M P + S D T +W++ S + H
Sbjct: 142 TSDEEMAAKKRTVGTHTSY-MSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHS 200
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
V +D ++GS D A +WD ++ VQ+ EGH +V++V FHP I
Sbjct: 201 GDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIA 260
Query: 246 TGSEDGTVRIWHATTYR-----LENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
TGS+D + R++ R + ++ +G+ ++ + S R + GY++ T+
Sbjct: 261 TGSDDSSCRLYDMRADREVAVFAKESIIFGVN---SVDFSVSGRLLFAGYNDYTV 312
Score = 128 (50.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 18 VKSVDLHPSEPW--ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
V ++DL P+E ++ IW+ +S + +SFE + V S KF + G
Sbjct: 203 VMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATG 262
Query: 76 ADDMFIRVYNYNTMDKVKVF--EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 133
+DD R+Y+ +V VF E+ + V + + + +D + LWD K
Sbjct: 263 SDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSER 322
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
++ GH + V V +P D ++ S D TI++W
Sbjct: 323 VCLLY-GHENKVSCVQVSP-DGTALSTGSWDYTIRVW 357
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 258 (95.9 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 66/241 (27%), Positives = 106/241 (43%)
Query: 16 ERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
+ V V+ PS + + TV IW + + F VRS F + Q +V
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+DD ++V++ + + H +++RC P ++S+SDD +KLWD + C
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECI 180
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ H +V V F+P T A+A +D T+K+W+ + H VN + +
Sbjct: 181 HSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP 239
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G+ YLIT S D T K+ D + TL GH + V F +G D V +
Sbjct: 240 SGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 256 W 256
W
Sbjct: 298 W 298
Score = 254 (94.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 73/291 (25%), Positives = 129/291 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + V VD + + + T+ IW+ + Q+ A F + V F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +G+ D +R++ N + VF AHT +R V ++++SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + H ++V F+P D SAS D+T+K+W+ S + + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V VD+ G + D+T KVWD +T +Q + H+ V+A+ FHP +IT
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLIT 246
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T++I RL TL+ + + ++ G + +MV
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/254 (24%), Positives = 112/254 (44%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ ++ + F+ V F + + +G+ D + +++ + F H D + C
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ + S S D +++W KG + +F H+ V V F D + +AS
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFC-SDGQSLVTASD 123
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+T+K+W+ F+L H V C + G +++ SDD T K+WD ++ C+
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECIH 181
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ H V+ V FHP I D TV++W A T+RL V A+ + S
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 284 RRIVIGYDEGTIMV 297
++ + T+ +
Sbjct: 242 NYLITASSDSTLKI 255
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 264 (98.0 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 85/277 (30%), Positives = 124/277 (44%)
Query: 30 ILAS-LYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
ILAS Y T+ +WN + E V +F K +++G+ D IR++NY T
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRT 342
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
+ + + HTD + C+ TL ++S S D +KLW + G T GH+ V V
Sbjct: 343 SECISILHGHTDSVLCLTFDSTL--LVSGSADCTVKLWHFSGGKRIT--LRGHTGPVNSV 398
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
+D S S D TIKIW+L + T AH + V D L + S D
Sbjct: 399 RII-RDRGLVLSGSDDSTIKIWSLETNTCLHTFSAH---IGPVQSLALADSR-LFSCSLD 453
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCF-HPELPIIITGSEDGTVRIWHATTYRLENTL 267
T K WD + K CV TL GH V + H L I+G+ DG V++W A +TL
Sbjct: 454 GTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRL---ISGAHDGVVKVWEAC--ECVHTL 508
Query: 268 NYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
E V ++ +V G ++G I + + P
Sbjct: 509 KNHSEPVTSVAL--GDCEVVSGSEDGKIYLWLFNNAP 543
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 56/172 (32%), Positives = 89/172 (51%)
Query: 127 DWEKGWMCTQI-FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W G C Q+ GHS VM + N AS S D TI++WNL + L+ H
Sbjct: 258 NWRHG-RCRQVVLSGHSDGVMCLQLV---RNILASGSYDATIRLWNLATFQQVALLEGHS 313
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV C+ + D+ LI+GS D T ++W+Y+T C+ L GHT +V + F L ++
Sbjct: 314 SGVTCLQF----DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTL--LV 367
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+GS D TV++WH + + TL V ++ ++ ++ G D+ TI +
Sbjct: 368 SGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKI 418
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 255 (94.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 69/263 (26%), Positives = 117/263 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L ++ + S P ++ S TV IWN ++ +L V + + +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
VV+ +DD ++++ T K + H +Y+ C +P V+S S D +++WD +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVN 189
G MC + HS V V+FN +D + AS S D ++IW+ + TL D V
Sbjct: 203 G-MCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-----I 244
V + G Y++ + D T K+WD+ ++ GH + S C + I
Sbjct: 261 FVKFSPNGK--YILASNLDSTLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWI 316
Query: 245 ITGSEDGTVRIWHATTYRLENTL 267
I+GSED + IW+ T + L
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCL 339
Score = 241 (89.9 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 63/225 (28%), Positives = 107/225 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ I+ + M K+ + V F + VV+G+ D +R+++ T +K A
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPA 211
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V+ + + S S D L+++WD G + + + V V F+P
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI 271
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
AS +LD T+K+W+ H+ C+ ++ G K ++I+GS+D +W+
Sbjct: 272 LAS-NLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK-WIISGSEDCKIYIWN 329
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIWHA 258
QT+ VQ LEGHT V A HP II +G+ D + IW +
Sbjct: 330 LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRS 374
Score = 236 (88.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 57/183 (31%), Positives = 92/183 (50%)
Query: 85 NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHY 144
NY M + E HT I P Y+ +SS D +K+W+ + +C + GH
Sbjct: 76 NYKLMCTL---EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH-MICERTLTGHKLG 131
Query: 145 VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLIT 204
V + ++ D+ SAS D+T+KI+ + + TL H V C ++ +++
Sbjct: 132 VNDIAWS-SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF--NPQSSLVVS 188
Query: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLE 264
GS D + ++WD +T C++TL H+ VSAV F+ + +I +GS DG VRIW +
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 265 NTL 267
TL
Sbjct: 249 KTL 251
Score = 218 (81.8 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 51/165 (30%), Positives = 83/165 (50%)
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVD 192
MCT EGH+ + F+P ++S D+T+KIWN+ TL H+ GVN D
Sbjct: 80 MCT--LEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVN--D 134
Query: 193 YFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGT 252
D +++ SDD T K+++ T +TL+GH + V F+P+ ++++GS D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 253 VRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
VRIW T TL + V A+ + + I G +G + +
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRI 239
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/197 (23%), Positives = 91/197 (46%)
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
TL+ H K ++ + G YL T S D T K+W+ C +TL GH V+ + +
Sbjct: 82 TLEGHTKSISSAKFSPCGK--YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS 139
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM-- 296
+ +++ S+D T++I+ T R+ TL V+ + S +V G +DE +
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
Query: 297 VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTCD 353
VK G + A D + + + I + + + ++ +G+ +K L +
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ----CIKTLVDDE 255
Query: 354 LYPQS-LKHNPNGRFVV 369
P + +K +PNG++++
Sbjct: 256 NPPVAFVKFSPNGKYIL 272
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/168 (23%), Positives = 78/168 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVA 67
+ L S+ V +V + I + Y G V IW+ + K+ E P V KF
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP 266
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP---YVLSSSDDMLIK 124
++++A D +++++++ +K + H + C+ + ++ +++S S+D I
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL--DRTIKIW 170
+W+ + + Q EGH+ V+ +P N AS +L D I IW
Sbjct: 327 IWNLQTREI-VQCLEGHTQPVLASDCHPVQ-NIIASGALEPDNKIHIW 372
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 255 (94.8 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 69/263 (26%), Positives = 117/263 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L ++ + S P ++ S TV IWN ++ +L V + + +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
VV+ +DD ++++ T K + H +Y+ C +P V+S S D +++WD +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVN 189
G MC + HS V V+FN +D + AS S D ++IW+ + TL D V
Sbjct: 203 G-MCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI-----I 244
V + G Y++ + D T K+WD+ ++ GH + S C + I
Sbjct: 261 FVKFSPNGK--YILASNLDSTLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWI 316
Query: 245 ITGSEDGTVRIWHATTYRLENTL 267
I+GSED + IW+ T + L
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCL 339
Score = 241 (89.9 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 63/225 (28%), Positives = 107/225 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ I+ + M K+ + V F + VV+G+ D +R+++ T +K A
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPA 211
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+D + V+ + + S S D L+++WD G + + + V V F+P
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI 271
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV--DYFTGGDKPYLITGSDDHTAKVWD 215
AS +LD T+K+W+ H+ C+ ++ G K ++I+GS+D +W+
Sbjct: 272 LAS-NLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK-WIISGSEDCKIYIWN 329
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS--EDGTVRIWHA 258
QT+ VQ LEGHT V A HP II +G+ D + IW +
Sbjct: 330 LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRS 374
Score = 236 (88.1 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 57/183 (31%), Positives = 92/183 (50%)
Query: 85 NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHY 144
NY M + E HT I P Y+ +SS D +K+W+ + +C + GH
Sbjct: 76 NYKLMCTL---EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH-MICERTLTGHKLG 131
Query: 145 VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLIT 204
V + ++ D+ SAS D+T+KI+ + + TL H V C ++ +++
Sbjct: 132 VNDIAWS-SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF--NPQSSLVVS 188
Query: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLE 264
GS D + ++WD +T C++TL H+ VSAV F+ + +I +GS DG VRIW +
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 265 NTL 267
TL
Sbjct: 249 KTL 251
Score = 218 (81.8 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 51/165 (30%), Positives = 83/165 (50%)
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVD 192
MCT EGH+ + F+P ++S D+T+KIWN+ TL H+ GVN D
Sbjct: 80 MCT--LEGHTKSISSAKFSPCG-KYLGTSSADKTVKIWNMDHMICERTLTGHKLGVN--D 134
Query: 193 YFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGT 252
D +++ SDD T K+++ T +TL+GH + V F+P+ ++++GS D +
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 253 VRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
VRIW T TL + V A+ + + I G +G + +
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRI 239
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/197 (23%), Positives = 91/197 (46%)
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
TL+ H K ++ + G YL T S D T K+W+ C +TL GH V+ + +
Sbjct: 82 TLEGHTKSISSAKFSPCGK--YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS 139
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM-- 296
+ +++ S+D T++I+ T R+ TL V+ + S +V G +DE +
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
Query: 297 VKIGR--EEPVASMDNSGKIIWAKHNE-IQTVNIKSVGADYEVTDGERLPLAVKELGTCD 353
VK G + A D + + + I + + + ++ +G+ +K L +
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ----CIKTLVDDE 255
Query: 354 LYPQS-LKHNPNGRFVV 369
P + +K +PNG++++
Sbjct: 256 NPPVAFVKFSPNGKYIL 272
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 40/168 (23%), Positives = 78/168 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP-VRSAKFVA 67
+ L S+ V +V + I + Y G V IW+ + K+ E P V KF
Sbjct: 207 KTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSP 266
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP---YVLSSSDDMLIK 124
++++A D +++++++ +K + H + C+ + ++ +++S S+D I
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL--DRTIKIW 170
+W+ + + Q EGH+ V+ +P N AS +L D I IW
Sbjct: 327 IWNLQTREI-VQCLEGHTQPVLASDCHPVQ-NIIASGALEPDNKIHIW 372
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 263 (97.6 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 71/263 (26%), Positives = 121/263 (46%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
++SV P ++ + +W+ ++T+ F E + S F + + +G+
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSG 408
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + VF D + VA+ P YV + S D +++WD +G ++
Sbjct: 409 DRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERL 467
Query: 138 F--EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+GH V V F+P + + SLD+TIK+W L +P N + KG CV F
Sbjct: 468 EGPDGHKDSVYSVAFSPNGRD-LVTGSLDKTIKLWELATPRGNMQ-NQGSKGGRCVKTFE 525
Query: 196 GG-----------DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
G D ++++GS D + WD +T S L+GH ++V +V P
Sbjct: 526 GHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFF 585
Query: 245 ITGSEDGTVRIWHATTYRLENTL 267
TGS D RIW T R++N +
Sbjct: 586 ATGSGDMRARIWSYT--RMDNRM 606
Score = 208 (78.3 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 66/220 (30%), Positives = 103/220 (46%)
Query: 57 ELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKV-FEAHTDYIRCVAVHPTLPYVL 115
+L +RS F +++ GA+D IRV++ T +++ F H I + +
Sbjct: 346 DLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRT-IRIQFAGHEQDIYSLDFARDGRTIA 404
Query: 116 SSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP 175
S S D ++LWD E G T +F V V +P DT A+ SLD+++++W+L
Sbjct: 405 SGSGDRTVRLWDIENGTALT-VFTIEDG-VTTVAISP-DTKYVAAGSLDKSVRVWDLTQG 461
Query: 176 DPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS------------ 220
P L D H+ V V + G L+TGS D T K+W+ T
Sbjct: 462 CPVERLEGPDGHKDSVYSVAFSPNGRD--LVTGSLDKTIKLWELATPRGNMQNQGSKGGR 519
Query: 221 CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
CV+T EGH V +V P+ +++GS+D V+ W T
Sbjct: 520 CVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRT 559
Score = 183 (69.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/225 (25%), Positives = 99/225 (44%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
I+ + A + + S+D I + TV +W+ ++ T F + + V +
Sbjct: 380 IRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIED-GVTTVAIS 438
Query: 67 ARKQWVVAGADDMFIRVYNYNT---MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
++V AG+ D +RV++ +++++ + H D + VA P +++ S D I
Sbjct: 439 PDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTI 498
Query: 124 KLWDW-----------EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
KLW+ KG C + FEGH +V+ V P D S S DR ++ W+
Sbjct: 499 KLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTP-DNQWVMSGSKDRGVQFWDP 557
Query: 173 GSPDPNFTLDAHQKGVNCVDYF-TGGDKPYLITGSDDHTAKVWDY 216
+ L H+ V V TGG + TGS D A++W Y
Sbjct: 558 RTGSTQLMLQGHKNSVISVAPSPTGG---FFATGSGDMRARIWSY 599
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 263 (97.6 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 79/276 (28%), Positives = 131/276 (47%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 413
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 414 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 470
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 471 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 523
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPELPIIITGSEDGTVRIWHATTYR-LEN-- 265
T K+WD +T C+QTL+G + + SAV C +IT S+DGTV++W T + N
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 583
Query: 266 TLNYGLER--VWAIGYMKSSRRIVIGYDEGTIMVKI 299
TL G VW I + +G GT K+
Sbjct: 584 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 619
Score = 258 (95.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 74/272 (27%), Positives = 127/272 (46%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 410 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 465
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 466 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 519
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTIMV---KIG--- 300
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+ + K G
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 579
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGA 332
R SG ++W I+ N K V A
Sbjct: 580 RNLVTLESGGSGGVVW----RIRASNTKLVCA 607
Score = 227 (85.0 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 373
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 374 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 429
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 430 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 483
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 484 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 527
Score = 192 (72.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 286 NWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 343
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 344 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 397
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 398 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 447
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 262 (97.3 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 79/276 (28%), Positives = 130/276 (47%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 371
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 372 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 428
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 429 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 481
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPELPIIITGSEDGTVRIWHATTYR-LEN-- 265
T K+WD +T C+QTL+G + SAV C +IT S+DGTV++W T + N
Sbjct: 482 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 541
Query: 266 TLNYGLER--VWAIGYMKSSRRIVIGYDEGTIMVKI 299
TL G VW I + +G GT K+
Sbjct: 542 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 577
Score = 257 (95.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 74/272 (27%), Positives = 127/272 (46%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 367
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 368 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 423
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 424 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 477
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTIMV---KIG--- 300
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+ + K G
Sbjct: 478 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 537
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGA 332
R SG ++W I+ N K V A
Sbjct: 538 RNLVTLESGGSGGVVW----RIRASNTKLVCA 565
Score = 227 (85.0 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 331
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 332 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 387
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 388 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 441
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 442 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 485
Score = 192 (72.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 244 NWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 301
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 302 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 355
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 356 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 405
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 256 (95.2 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 66/241 (27%), Positives = 105/241 (43%)
Query: 16 ERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
+ V V+ PS + + TV IW + + F VRS F + Q V
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTA 121
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+DD ++V+ + + H +++RC P ++S+SDD +KLWD + C
Sbjct: 122 SDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSRECV 180
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ H +V V F+P T A+A +D T+K+W++ + H VN + +
Sbjct: 181 HSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP 239
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G+ YLIT S D T K+ D + TL GH + V F +G D V +
Sbjct: 240 SGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 256 W 256
W
Sbjct: 298 W 298
Score = 244 (91.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 63/254 (24%), Positives = 110/254 (43%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+ ++ + F+ V F + + +G+ D + V++ + F H D + C
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL 163
V P+ + S S D +++W KG + +F H+ V V F D +F +AS
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFC-SDGQSFVTASD 123
Query: 164 DRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
D+T+K+W F+L H V C + G +++ SDD T K+WD ++ CV
Sbjct: 124 DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR--LIVSASDDKTVKLWDKSSRECVH 181
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSS 283
+ H V+ V FHP I D TV++W T+RL V + + S
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG 241
Query: 284 RRIVIGYDEGTIMV 297
++ + T+ +
Sbjct: 242 NYLITASSDSTLKI 255
Score = 242 (90.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 70/291 (24%), Positives = 126/291 (43%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
++R + V VD + + + + +W+ + Q+ A F + V F
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ +G+ D +R++ N + VF AHT +R V +++SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ + + H ++V F+P D SAS D+T+K+W+ S + + H
Sbjct: 131 ATHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V VD+ G + D+T KVWD +T +Q + H+ V+ + FHP +IT
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLIT 246
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S D T++I RL TL+ + + ++ G + +MV
Sbjct: 247 ASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 262 (97.3 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 79/276 (28%), Positives = 130/276 (47%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 411
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 412 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 468
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 469 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 521
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPELPIIITGSEDGTVRIWHATTYR-LEN-- 265
T K+WD +T C+QTL+G + SAV C +IT S+DGTV++W T + N
Sbjct: 522 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 581
Query: 266 TLNYGLER--VWAIGYMKSSRRIVIGYDEGTIMVKI 299
TL G VW I + +G GT K+
Sbjct: 582 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 617
Score = 257 (95.5 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 74/272 (27%), Positives = 127/272 (46%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 407
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 408 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 463
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 464 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 517
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTIMV---KIG--- 300
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+ + K G
Sbjct: 518 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 577
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGA 332
R SG ++W I+ N K V A
Sbjct: 578 RNLVTLESGGSGGVVW----RIRASNTKLVCA 605
Score = 227 (85.0 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 371
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 372 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 427
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 428 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 481
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 482 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 525
Score = 192 (72.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 284 NWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 341
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 342 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 395
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 396 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 445
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 256 (95.2 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 68/241 (28%), Positives = 117/241 (48%)
Query: 58 LPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVH-PTLPYVLS 116
LP+ + F + G+ D ++++ + +++ E H + + +A + P V +
Sbjct: 93 LPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVAT 152
Query: 117 SSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD 176
S D KLW E G C F GH+ ++ + FNP+ T A+ S+D T K+W++ S +
Sbjct: 153 GSFDKTCKLWSAETG-KCFYTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDVESGE 210
Query: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
TL H + + + T GD+ L+TGS DHTA +WD + V L GH +S V
Sbjct: 211 EVSTLAGHFAEIISLCFNTTGDR--LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQ 268
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIM 296
F+ + +I T S D + ++W A + TL + V + + + + I +GT
Sbjct: 269 FNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSR 328
Query: 297 V 297
V
Sbjct: 329 V 329
Score = 241 (89.9 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 65/234 (27%), Positives = 109/234 (46%)
Query: 24 HPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
+P + T +W+ +S + + S F +V G+ D +
Sbjct: 186 NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL 245
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ + KV V H I CV + + ++S D K+WD E G C GH+
Sbjct: 246 WDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG-QCLATLLGHND 304
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
V+ V FN A+AS D T ++++ + L+ H+ ++ V + G + ++
Sbjct: 305 EVLDVCFNYTG-QLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSR--VL 361
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
T S D T++VW +T +C+Q LEGH+ + + F+ E IITGS+D T RIWH
Sbjct: 362 TASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 236 (88.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 68/244 (27%), Positives = 106/244 (43%)
Query: 20 SVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV-ARKQWVVAGADD 78
+V + S + Y T IW+ S + E V + F V G+ D
Sbjct: 97 NVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFD 156
Query: 79 MFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIF 138
++++ T F HT I C+A +P V + S D KLWD E G + +
Sbjct: 157 KTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL- 215
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
GH ++ + FN + + S D T +W++ S L H+ ++CV + D
Sbjct: 216 AGHFAEIISLCFNTTG-DRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQF--NWD 272
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
+ T S D + KVWD + C+ TL GH V VCF+ +I T S DGT R++
Sbjct: 273 CSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFST 332
Query: 259 TTYR 262
T++
Sbjct: 333 DTFQ 336
Score = 224 (83.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 62/217 (28%), Positives = 104/217 (47%)
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E+ + + + H + V FN K + F + S DRT KIW+ S + TL+ H+ V
Sbjct: 79 ERKFYLFRALQAHILPLTNVAFN-KSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV 137
Query: 189 NCVDYFTG-GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
+ + GDK + TGS D T K+W +T C T GHT + + F+P+ ++ TG
Sbjct: 138 YAIAFNNPYGDK--VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATG 195
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIM--VKIGREEP 304
S D T ++W + +TL + ++ + + R+V G +D I+ V GR+
Sbjct: 196 SMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH 255
Query: 305 VASMDNSGKIIWAKHN-EIQTVNIKSVGADYEVTDGE 340
V S + G+I + N + + S+ +V D E
Sbjct: 256 VLS-GHRGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Score = 208 (78.3 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 64/265 (24%), Positives = 113/265 (42%)
Query: 35 YSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKV 94
+ T +W+ ++ +F + F + V G+ D ++++ + ++V
Sbjct: 155 FDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST 214
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H I + + T +++ S D LWD G + GH + V FN D
Sbjct: 215 LAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRK-VHVLSGHRGEISCVQFN-WD 272
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN--CVDYFTGGDKPYLITGSDDHTAK 212
+ A+ASLD++ K+W+ TL H V C +Y TG + T S D T++
Sbjct: 273 CSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNY-TG---QLIATASADGTSR 328
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
V+ T C+ LEGH +S VCF+ + ++T S D T R+W T L +
Sbjct: 329 VFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSD 388
Query: 273 RVWAIGYMKSSRRIVIGYDEGTIMV 297
+++ + I+ G + T +
Sbjct: 389 EIFSCAFNYEGDTIITGSKDNTCRI 413
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+ +AH + VA + + ++ S D K+WD G + EGH + V + FN
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTL-EGHRNVVYAIAFNN 144
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ A+ S D+T K+W+ + +T H + C+ + + TGS D TAK
Sbjct: 145 PYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAF--NPQSTLVATGSMDTTAK 202
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
+WD ++ V TL GH + ++CF+ ++TGS D T +W + R + L+
Sbjct: 203 LWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 262 (97.3 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 79/276 (28%), Positives = 130/276 (47%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 491
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 492 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 548
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 549 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 601
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPELPIIITGSEDGTVRIWHATTYR-LEN-- 265
T K+WD +T C+QTL+G + SAV C +IT S+DGTV++W T + N
Sbjct: 602 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 661
Query: 266 TLNYGLER--VWAIGYMKSSRRIVIGYDEGTIMVKI 299
TL G VW I + +G GT K+
Sbjct: 662 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 697
Score = 257 (95.5 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 74/272 (27%), Positives = 127/272 (46%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 487
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 488 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 543
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 544 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 597
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTIMV---KIG--- 300
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+ + K G
Sbjct: 598 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 657
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGA 332
R SG ++W I+ N K V A
Sbjct: 658 RNLVTLESGGSGGVVW----RIRASNTKLVCA 685
Score = 227 (85.0 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 451
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 452 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 507
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 508 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 561
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 562 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 605
Score = 192 (72.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 364 NWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 421
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 422 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 475
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 476 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 525
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 262 (97.3 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 79/276 (28%), Positives = 130/276 (47%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 496
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 497 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 553
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 554 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 606
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPELPIIITGSEDGTVRIWHATTYR-LEN-- 265
T K+WD +T C+QTL+G + SAV C +IT S+DGTV++W T + N
Sbjct: 607 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 666
Query: 266 TLNYGLER--VWAIGYMKSSRRIVIGYDEGTIMVKI 299
TL G VW I + +G GT K+
Sbjct: 667 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 702
Score = 257 (95.5 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 74/272 (27%), Positives = 127/272 (46%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 492
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 493 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 548
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 549 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 602
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTIMV---KIG--- 300
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+ + K G
Sbjct: 603 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 662
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGA 332
R SG ++W I+ N K V A
Sbjct: 663 RNLVTLESGGSGGVVW----RIRASNTKLVCA 690
Score = 227 (85.0 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 456
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 457 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 512
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 513 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 566
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 567 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 610
Score = 192 (72.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 369 NWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 426
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 427 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 480
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 481 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 530
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 255 (94.8 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 67/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ A D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 235 (87.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 63/218 (28%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ + D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSAARDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 212 (79.7 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 65/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S++ D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 184 (69.8 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 264 (98.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 78/289 (26%), Positives = 145/289 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+++G+ D ++V++ ++ V + HT +RC+ +H + V+S S D +++WD E+G
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQG 1105
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C + GH V V ++ K S + D +KIW+ + TL H V +
Sbjct: 1106 -SCLHVLVGHLAAVRCVQYDGK---LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSL 1161
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
+ D ++++GS D + +VWD +T +C TL GH S + I+++G+ D
Sbjct: 1162 QF----DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--ILVSGNADS 1215
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMK-SSRRIVIGYDEGTIM---VKIGRE-EPVA 306
TV++W TT + TL+ + A+ ++ +SR +V D+GT+ VK G +
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNLV 1275
Query: 307 SMDN--SGKIIWA-KHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTC 352
++D+ SG ++W + N+ T I +VG+ + + + L G C
Sbjct: 1276 ALDSGGSGGVVWRIRAND--TKLICAVGSRNGTEETKLMVLDFDVEGAC 1322
Score = 250 (93.1 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 64/232 (27%), Positives = 112/232 (48%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +W+ S + + VR K VV+G+ D +RV++
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQG 1105
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV L ++S + D ++K+W E+ C +GH++ V +
Sbjct: 1106 SCLHVLVGHLAAVRCVQYDGKL--IVSGAYDYMVKIWHPERQ-ECLHTLQGHTNRVYSLQ 1162
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ + L++G+ D
Sbjct: 1163 F---DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMEL----RQNILVSGNADS 1215
Query: 210 TAKVWDYQTKSCVQTLEG-HTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
T KVWD T C+QTL G + H+ + C ++T S+DGTV++W T
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKT 1267
Score = 225 (84.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 60/190 (31%), Positives = 92/190 (48%)
Query: 91 KVKVFEAHTDY-IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
K KV + H D+ I C+ ++S SDD +K+W G C + GH+ V
Sbjct: 986 KPKVLKGHDDHVITCLQFSGNR--IVSGSDDNTLKVWSAVNG-KCLRTLVGHTGGVWS-- 1040
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
+ N S S DRT+K+W++ S TL H V C+ G K +++GS D
Sbjct: 1041 -SQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSK--VVSGSRDA 1095
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T +VWD + SC+ L GH V V + +L I++G+ D V+IWH +TL
Sbjct: 1096 TLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKL--IVSGAYDYMVKIWHPERQECLHTLQG 1153
Query: 270 GLERVWAIGY 279
RV+++ +
Sbjct: 1154 HTNRVYSLQF 1163
Score = 183 (69.5 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 56/169 (33%), Positives = 79/169 (46%)
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
++ +GH +V +T N S S D T+K+W+ + TL H GV +
Sbjct: 988 KVLKGHDDHV--ITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV-WSSQMS 1044
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G +I+GS D T KVWD + +CV TL+GHT V C H +++GS D T+R+
Sbjct: 1045 GN---IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLHGSKVVSGSRDATLRV 1099
Query: 256 WHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKIGREE 303
W + L L V + Y + IV G YD MVKI E
Sbjct: 1100 WDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYD---YMVKIWHPE 1143
Score = 168 (64.2 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/218 (22%), Positives = 97/218 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+ + LH S+ +++ T+ +W+ + + VR ++ +
Sbjct: 1071 LQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKL- 1127
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V+GA D +++++ + + + HT+ + + +V+S S D I++WD E
Sbjct: 1128 -IVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGL--HVVSGSLDTSIRVWDVET 1184
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKG 187
G C GH + N S + D T+K+W++ + TL H
Sbjct: 1185 G-NCKHTLMGHQSLTSGMELRQ---NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSA 1240
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
V C+ + + +++T SDD T K+WD +T ++ L
Sbjct: 1241 VTCLQF----NSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 261 (96.9 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 59/152 (38%), Positives = 83/152 (54%)
Query: 116 SSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP 175
S SDD ++LWD G + Q EGHS +V+ V F+P D AS S D+T+++W+ +
Sbjct: 712 SGSDDETVRLWDPATGSL-QQTLEGHSGWVLSVAFSP-DGRLLASGSFDKTVRLWDPATG 769
Query: 176 DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
TL H V V + G L +GS D T ++WD T S QTL GH+ V +V
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGR--LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSV 827
Query: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
F P+ ++ +GS D TVR+W T L+ TL
Sbjct: 828 AFSPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
Q EGHS+ V V AS S D T+++W+ + TL+ H V V +
Sbjct: 697 QTLEGHSNSVWAV---------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP 747
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G L +GS D T ++WD T S QTL GH++ V +V F P+ ++ +GS D TVR+
Sbjct: 748 DGR--LLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRL 805
Query: 256 WHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
W T L+ TL + V ++ + R + G + T+
Sbjct: 806 WDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTV 845
Score = 164 (62.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 43/156 (27%), Positives = 80/156 (51%)
Query: 18 VKSVDLHPSEPW-ILASLYSG-TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
+++++ H + W +LAS TV +W+ + ++ ++ E V S F + + +G
Sbjct: 696 LQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASG 755
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT 135
+ D +R+++ T + H++++R VA P + S S D ++LWD G +
Sbjct: 756 SFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSL-Q 814
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
Q GHS V V F+P D AS S D+T+++W+
Sbjct: 815 QTLRGHSDTVRSVAFSP-DGRLLASGSFDKTVRLWD 849
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
R K W + P + L H+ V V + +++ S+D T KVWDY+T +T
Sbjct: 89 RDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFS--VMVSASEDATIKVWDYETGDFERT 145
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSR 284
L+GHT +V + F ++ + S D T+++W + T++ V ++ M +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 285 RIVIGYDEGTI 295
IV + TI
Sbjct: 206 HIVSASRDKTI 216
Score = 54 (24.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 437 GTLLAMCSNDFICFYDWA----ECRL-IRRIDVTVKNLYWADSGDLVAIASDT 484
GTL+A CSND W EC+ +R + V+ + WA +I+ T
Sbjct: 246 GTLIASCSNDQTVRV-WVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 238 (88.8 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 132/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/269 (24%), Positives = 122/269 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + S + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEK-----GWMCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTI 167
W + E W + S T F S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + +GG ++++ +DD T +VWDY+ K C++TL
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 236 (88.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVEDISFDHSG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 214 (80.4 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 66/307 (21%), Positives = 131/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
+ G W+ + ++ N + + A L +
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 183 (69.5 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL-------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 256 (95.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 61/250 (24%), Positives = 112/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +RS K A + +DD+ R+ + T ++K+ H+ +
Sbjct: 250 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 309
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D ++LW + + C ++GH++ V F+P F S DR
Sbjct: 310 SFSPDRNYLLSSSEDGTVRLWSLQT-FTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 367
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H VNC + + Y+ TGS D T ++WD +CV+
Sbjct: 368 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 425
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + TG+ DG V +W + L + V ++ + +
Sbjct: 426 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 485
Query: 286 IVIGYDEGTI 295
+ G + T+
Sbjct: 486 LASGSMDNTV 495
Score = 226 (84.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 53/198 (26%), Positives = 91/198 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+S GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 306 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 365
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 366 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRI 424
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + +TF+P A+ + D + +W++G L H V + + G
Sbjct: 425 FTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 483
Query: 198 DKPYLITGSDDHTAKVWD 215
+ L +GS D+T ++WD
Sbjct: 484 E--ILASGSMDNTVRLWD 499
Score = 206 (77.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV A F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 305 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 364
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 365 HDRVARLWATDH-YQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCV 422
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT V ++ F
Sbjct: 423 RIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 480
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 481 RDGEILASGSMDNTVRLWDA 500
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 254 VRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGASFS 312
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S+S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 313 P-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 367
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP + TGS D TVR+W
Sbjct: 368 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 427
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ ++ + + R + G +G +++
Sbjct: 428 HKGPIHSLTFSPNGRFLATGATDGRVLL 455
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 256 (95.2 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 68/232 (29%), Positives = 116/232 (50%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ T+ +WN ++ + VR ++ VV+G+ D +RV++ T
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETG 413
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
+ V H +RCV V+S + D ++K+WD E C +GH++ V +
Sbjct: 414 QCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQ 470
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
F D S SLD +I++W++ + + TL HQ + ++ D L++G+ D
Sbjct: 471 F---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDN-ILVSGNADS 523
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAV-CFHPELPIIITGSEDGTVRIWHATT 260
T K+WD +T C+QTL+G + + SAV C +IT S+DGTV++W T
Sbjct: 524 TVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 575
Score = 251 (93.4 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 63/229 (27%), Positives = 112/229 (48%)
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +++G+ D ++V+N T + + HT +RC+ +H V+S S D +++WD
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
E G C + GH V V + D S + D +K+W+ + TL H
Sbjct: 410 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 465
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V + + D ++++GS D + +VWD +T +C+ TL GH S + I+++G
Sbjct: 466 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSG 519
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGTI 295
+ D TV+IW T + TL + A+ ++ ++ VI D+GT+
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTV 568
Score = 227 (85.0 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 60/226 (26%), Positives = 113/226 (50%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+DD ++V++ T ++ HT + + + ++S S D +K+W+ E G
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETG 373
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
C GH+ V + + K S S D T+++W++ + L H V CV
Sbjct: 374 -ECIHTLYGHTSTVRCMHLHEKRV---VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 429
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
Y D +++G+ D KVWD +T++C+ TL+GHT+ V ++ F + +++GS D
Sbjct: 430 QY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 483
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
++R+W T +TL G + + + G +V G + T+ +
Sbjct: 484 SIRVWDVETGNCIHTLT-GHQSLTS-GMELKDNILVSGNADSTVKI 527
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 23 LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82
+H E +++ T+ +W+ ++ VR ++ R+ VV+GA D ++
Sbjct: 389 MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVK 446
Query: 83 VYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHS 142
V++ T + + HT+ + + +V+S S D I++WD E G C GH
Sbjct: 447 VWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVETG-NCIHTLTGHQ 503
Query: 143 HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA---HQKGVNCVDYFTGGDK 199
+ KD N S + D T+KIW++ + TL HQ V C+ + +K
Sbjct: 504 SLTSGMEL--KD-NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF----NK 556
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTL 225
++IT SDD T K+WD +T ++ L
Sbjct: 557 NFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 192 (72.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/175 (31%), Positives = 86/175 (49%)
Query: 127 DWEKGWMCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+W +G + + ++ +GH +V +T N S S D T+K+W+ + TL H
Sbjct: 286 NWRRGELRSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 343
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
GV + + +I+GS D T KVW+ +T C+ TL GHT V C H ++
Sbjct: 344 GGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVV 397
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMVKI 299
+GS D T+R+W T + + L + V + Y RR+V G YD MVK+
Sbjct: 398 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVKV 447
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 256 (95.2 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 61/200 (30%), Positives = 97/200 (48%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE--KGWMCTQIFEGHSHYVMQVTFNPKDT 155
H+ + P +VLSSS D I+LW + +C ++GH++ V F+P
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVC---YKGHNYPVWDAQFSPFG- 472
Query: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+ FAS S DRT +IW++ P + H V+CV + + Y+ TGS D T ++WD
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN--YIATGSSDKTVRLWD 530
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVW 275
QT CV+ GH V ++ P+ + +G EDGT+ +W +T R L VW
Sbjct: 531 VQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVW 590
Query: 276 AIGYMKSSRRIVIGYDEGTI 295
++ Y + G + T+
Sbjct: 591 SLSYSGEGSLLASGSADCTV 610
Score = 222 (83.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 57/221 (25%), Positives = 98/221 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L S V S P ++L+S T+ +W+ + ++ PV A+F
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+ + + D R+++ + + +++ H + CV HP Y+ + S D ++LWD +
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G C +IF GH V+ + +P D AS D TI +W+L + L H V
Sbjct: 534 G-ECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWS 591
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
+ Y G+ L +GS D T K+WD + + + E N
Sbjct: 592 LSY--SGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGN 630
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 57/230 (24%), Positives = 94/230 (40%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GHS V TF+P + S+S D TI++W+ H V + G
Sbjct: 416 GHSGPVYSATFSPPG-DFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH- 473
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
Y + S D TA++W ++ + GH +V V +HP I TGS D TVR+W
Sbjct: 474 -YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQ 532
Query: 260 TYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKIIWAK 318
T V ++ R + G ++GTIM+ + + + +W+
Sbjct: 533 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSL 592
Query: 319 HNEIQTVNIKSVGAD-----YEVTDGERLPLAVKELGTCDLYPQSLKHNP 363
+ + S AD ++VT +L A ++ G + +SL+ P
Sbjct: 593 SYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRL-RSLRTFP 641
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 257 (95.5 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 61/250 (24%), Positives = 112/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +RS K + + +DD+ R+ + T ++K+ H+ +
Sbjct: 491 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 550
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D ++LW + + C ++GH++ V F+P F S DR
Sbjct: 551 SFSPDRNYLLSSSEDGTVRLWSLQT-FTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 608
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H VNC Y + Y+ TGS D T ++WD +CV+
Sbjct: 609 VARLWATDHYQPLRIFAGHLADVNCTRYHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 666
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + TG+ DG V +W + L + V ++ + +
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 726
Query: 286 IVIGYDEGTI 295
+ G + T+
Sbjct: 727 LASGSMDNTV 736
Score = 228 (85.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 59/225 (26%), Positives = 100/225 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+S GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 547 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 606
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 607 DRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNG-NCVRI 665
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + +TF+P A+ + D + +W++G L H V + + G
Sbjct: 666 FTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 724
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
+ L +GS D+T ++WD + LE T + + H LP
Sbjct: 725 E--ILASGSMDNTVRLWD--AVKAFEDLE--TDDFTTATGHINLP 763
Score = 203 (76.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 51/200 (25%), Positives = 99/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV A F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 546 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 605
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V ++P ++N A+ S DRT+++W++ + +
Sbjct: 606 HDRVARLWATDH-YQPLRIFAGHLADVNCTRYHP-NSNYVATGSADRTVRLWDVLNGNCV 663
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT V ++ F
Sbjct: 664 RIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 721
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 722 RDGEILASGSMDNTVRLWDA 741
Score = 179 (68.1 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 495 VRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGASFS 553
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S+S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 554 P-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 608
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ +HP + TGS D TVR+W
Sbjct: 609 VARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 668
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ ++ + + R + G +G +++
Sbjct: 669 HKGPIHSLTFSPNGRFLATGATDGRVLL 696
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 253 (94.1 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 73/287 (25%), Positives = 130/287 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD P P+ A S + I+ SQ K+F + A F Q +VAG++
Sbjct: 41 VSKVDFSPQLPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLVAGSE 100
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +++++ N ++ FE HT + V +V+S +DD +KLWD
Sbjct: 101 DGVVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKLWDIPNSKEILT- 159
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ HS YV + + + F + S D T+KI++ + + N H + V V F G
Sbjct: 160 FKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDART-NKNVLCVEHGQPVESVLLFPSG 218
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C +++GS D V+++
Sbjct: 219 G---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY 275
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
T+Y++ ++ +Y + ++ IV+G G + VK + E
Sbjct: 276 STTSYKVVHSFDYAAS-ILSLALSHQDETIVVGMTNGILSVKHRKSE 321
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 256 (95.2 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 61/250 (24%), Positives = 112/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +RS K A + +DD+ R+ + T ++K+ H+ +
Sbjct: 490 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 549
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D ++LW + + C ++GH++ V F+P F S DR
Sbjct: 550 SFSPDRNYLLSSSEDGTVRLWSLQT-FTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 607
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H VNC + + Y+ TGS D T ++WD +CV+
Sbjct: 608 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 665
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + TG+ DG V +W + L + V ++ + +
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 725
Query: 286 IVIGYDEGTI 295
+ G + T+
Sbjct: 726 LASGSMDNTV 735
Score = 226 (84.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 53/198 (26%), Positives = 91/198 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+S GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 546 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 605
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 606 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRI 664
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + +TF+P A+ + D + +W++G L H V + + G
Sbjct: 665 FTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 723
Query: 198 DKPYLITGSDDHTAKVWD 215
+ L +GS D+T ++WD
Sbjct: 724 E--ILASGSMDNTVRLWD 739
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV A F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 545 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 604
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 605 HDRVARLWATDH-YQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCV 662
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT V ++ F
Sbjct: 663 RIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 720
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 721 RDGEILASGSMDNTVRLWDA 740
Score = 182 (69.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 494 VRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGASFS 552
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S+S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 553 P-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 607
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP + TGS D TVR+W
Sbjct: 608 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 667
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ ++ + + R + G +G +++
Sbjct: 668 HKGPIHSLTFSPNGRFLATGATDGRVLL 695
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 256 (95.2 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 61/250 (24%), Positives = 112/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +RS K A + +DD+ R+ + T ++K+ H+ +
Sbjct: 491 ADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 550
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D ++LW + + C ++GH++ V F+P F S DR
Sbjct: 551 SFSPDRNYLLSSSEDGTVRLWSLQT-FTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 608
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H VNC + + Y+ TGS D T ++WD +CV+
Sbjct: 609 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 666
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + TG+ DG V +W + L + V ++ + +
Sbjct: 667 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 726
Query: 286 IVIGYDEGTI 295
+ G + T+
Sbjct: 727 LASGSMDNTV 736
Score = 228 (85.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 59/225 (26%), Positives = 100/225 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+S GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 547 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 606
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 607 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRI 665
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + +TF+P A+ + D + +W++G L H V + + G
Sbjct: 666 FTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 724
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
+ L +GS D+T ++WD + LE T + + H LP
Sbjct: 725 E--ILASGSMDNTVRLWD--AVKAFEDLE--TDDFTTATGHINLP 763
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV A F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 546 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 605
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 606 HDRVARLWATDH-YQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCV 663
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT V ++ F
Sbjct: 664 RIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 721
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 722 RDGEILASGSMDNTVRLWDA 741
Score = 182 (69.1 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 495 VRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGASFS 553
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S+S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 554 P-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 608
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP + TGS D TVR+W
Sbjct: 609 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 668
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ ++ + + R + G +G +++
Sbjct: 669 HKGPIHSLTFSPNGRFLATGATDGRVLL 696
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 255 (94.8 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 65/276 (23%), Positives = 118/276 (42%)
Query: 20 SVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDM 79
+VD+ I+ TV +W+ VT +RS K A + +DD+
Sbjct: 455 AVDITDDSSMIVGGFADSTVRVWS-----------VTPKKLRSVKAAADLSLIDKESDDV 503
Query: 80 FIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFE 139
R+ + T ++K+ H+ + + P Y+LS S+D ++LW + + C ++
Sbjct: 504 LERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQT-FTCLVGYK 562
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH++ V F+P F S DR ++W P H V C + +
Sbjct: 563 GHNYPVWDTQFSPYGYY-FVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN- 620
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
Y+ TGS D T ++WD +CV+ GH + ++ F P + TG+ DG V +W
Sbjct: 621 -YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIG 679
Query: 260 TYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
+ L + ++A+ + + + G + T+
Sbjct: 680 HGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTV 715
Score = 217 (81.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 55/225 (24%), Positives = 98/225 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+ GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 526 VYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 585
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP Y+ + S D ++LWD G C +I
Sbjct: 586 DRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNG-NCVRI 644
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + + F+P A+ + D + +W++G L H + + + G
Sbjct: 645 FTGHKGPIHSLAFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDG 703
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
+ L +GS D+T ++WD + LE T + + H LP
Sbjct: 704 E--ILASGSMDNTVRLWD--AVKAFEDLE--TDDFTTATGHINLP 742
Score = 201 (75.8 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/200 (25%), Positives = 98/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 525 PVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 584
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 585 HDRVARLWATDH-YQPLRIFAGHLADVTCTRFHP-NSNYIATGSADRTVRLWDVLNGNCV 642
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT + A+ F
Sbjct: 643 RIFTGHKGPIHSLAFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS 700
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 701 RDGEILASGSMDNTVRLWDA 720
Score = 189 (71.6 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 61/229 (26%), Positives = 98/229 (42%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 474 VRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGTSFS 532
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 533 P-DRNYLLSCSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 587
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP I TGS D TVR+W
Sbjct: 588 VARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTG 647
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKIIWA 317
+ ++ + + R + G +G +++ IG V + I+A
Sbjct: 648 HKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYA 696
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 251 (93.4 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 64/229 (27%), Positives = 108/229 (47%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G D I++++ + VK HT + C+ + ++S S D +++WD G
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKV--IISGSSDSTVRVWDVNTG 280
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP---NFTLDAHQKGV 188
M + H V+ + FN + S DR+I +W++ SP L H+ V
Sbjct: 281 EMVNTLIH-HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAV 336
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
N VD+ D+ Y+++ S D T KVW T V+TL GH ++ + + L +++GS
Sbjct: 337 NVVDF----DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGS 390
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
D ++R+W L E V I + ++RIV G +G I V
Sbjct: 391 SDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKIKV 437
Score = 242 (90.2 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 67/251 (26%), Positives = 127/251 (50%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
R++ RSE K V L + I++ L T+ IW+ K+ V ++
Sbjct: 201 RRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDD 260
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ +++G+ D +RV++ NT + V H + + + + + +++ S D I +WD
Sbjct: 261 KV--IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWD 316
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 317 MTSPSEITLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 373
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D++ ++WD + +C++ LEGH V + F + I+
Sbjct: 374 RGIACLQY---RDR-LVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR--IV 427
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 428 SGAYDGKIKVW 438
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 146 MQVTFNPKDTNTFASASLDRTI--KIWN-LGSPDPNFTLDAHQ-KGVNCVDYFTGG---- 197
MQ F P+ T S R + KI N + S + N+ H + +NC + G
Sbjct: 157 MQYLFKPRPGQTQRPHSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCL 216
Query: 198 --DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
D +++G D+T K+WD CV+TL GHT +V +C + +II+GS D TVR+
Sbjct: 217 QYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISGSSDSTVRV 274
Query: 256 WHATTYRLENTLNYGLERV 274
W T + NTL + E V
Sbjct: 275 WDVNTGEMVNTLIHHCEAV 293
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
++++V+ + D I+V++ +T + V+ H I C+ L V+S S D I+LWD
Sbjct: 343 EKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNSIRLWDI 400
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQKG 187
E G C ++ EGH V + F DT S + D IK+W+L + DP ++
Sbjct: 401 ECG-ACLRVLEGHEELVRCIRF---DTKRIVSGAYDGKIKVWDLVAALDPRAA--SNTLC 454
Query: 188 VNCVDYFTGG------DKPYLITGSDDHTAKVWDY 216
+N + TG D+ +++ S D T +WD+
Sbjct: 455 LNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIWDF 489
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 54/239 (22%), Positives = 99/239 (41%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
I++ TV +W+ + M + V +F +V + D I V++ +
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMTSP 320
Query: 90 DKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVM 146
++ +V H + V Y++S+S D IK+W + GH +
Sbjct: 321 SEITLRRVLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIA 377
Query: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
+ + + S S D +I++W++ L+ H++ V C+ + D +++G+
Sbjct: 378 CLQYRDR---LVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF----DTKRIVSGA 430
Query: 207 DDHTAKVWDY------QTKS---CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
D KVWD + S C+ TL HT V + F E I+ + S D T+ IW
Sbjct: 431 YDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFD-EFQIV-SSSHDDTILIW 487
Score = 121 (47.7 bits), Expect = 0.00081, P = 0.00081
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 2 PLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVR 61
P + ++R L V VD E +I+++ T+ +W+ + ++ + +
Sbjct: 320 PSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA 377
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
++ R + VV+G+ D IR+++ ++V E H + +RC+ ++S + D
Sbjct: 378 CLQY--RDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR--IVSGAYDG 433
Query: 122 LIKLWDW--------EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
IK+WD +C H+ V ++ F D S+S D TI IW+
Sbjct: 434 KIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF---DEFQIVSSSHDDTILIWDFL 490
Query: 174 SPDPN 178
+ PN
Sbjct: 491 NFTPN 495
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 254 (94.5 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 62/250 (24%), Positives = 110/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +R K A + +DD+ R+ + T + K+ H+ + V
Sbjct: 446 ADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGV 505
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D I+LW + + C ++GH++ V F+P F S DR
Sbjct: 506 SFSPDRNYLLSSSEDGTIRLWSLQT-FTCLVGYKGHNYPVWDTQFSPFGYY-FVSGGHDR 563
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H V C + + Y+ TGS D T ++WD +CV+
Sbjct: 564 VARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YVATGSSDRTVRLWDVLNGNCVRIF 621
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + +GS DG V +W + L ++A+ + +
Sbjct: 622 TGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEI 681
Query: 286 IVIGYDEGTI 295
I G + T+
Sbjct: 682 IASGSIDNTV 691
Score = 235 (87.8 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 58/225 (25%), Positives = 101/225 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V V P ++L+S GT+ +W+ Q+ T ++ PV +F + V+G
Sbjct: 502 VYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGH 561
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 562 DRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNG-NCVRI 620
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + + F+P AS S D + +W++G L H + + + G
Sbjct: 621 FTGHKGPIHSLAFSPNG-KFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDG 679
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
+ + +GS D+T ++WD + +E T + +A H LP
Sbjct: 680 E--IIASGSIDNTVRLWDVMR--AIDDVE--TDDFTAATGHIHLP 718
Score = 200 (75.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/198 (25%), Positives = 97/198 (48%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV F + ++++ ++D IR+++ T + ++ H + P Y +S
Sbjct: 501 PVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGG 560
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 561 HDRVARLWATDH-YQPLRIFAGHLADVTCTRFHP-NSNYVATGSSDRTVRLWDVLNGNCV 618
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L +GS D +WD + L+GHT + A+ F
Sbjct: 619 RIFTGHKGPIHSLAFSPNGK--FLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS 676
Query: 239 PELPIIITGSEDGTVRIW 256
+ II +GS D TVR+W
Sbjct: 677 RDGEIIASGSIDNTVRLW 694
Score = 192 (72.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK ++I GHS V V+F+
Sbjct: 450 VRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMD-EKTSSESKILHGHSGPVYGVSFS 508
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK--PYLITGSDDH 209
P D N S+S D TI++W+L + FT KG N + T Y ++G D
Sbjct: 509 P-DRNYLLSSSEDGTIRLWSLQT----FTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDR 563
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP + TGS D TVR+W
Sbjct: 564 VARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTG 623
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKIIWA 317
+ ++ + + + + G +G +++ IG +A + I+A
Sbjct: 624 HKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYA 672
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 232 (86.7 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 74/251 (29%), Positives = 116/251 (46%)
Query: 98 HTDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKG-WMCTQIFE-GHSHYVMQVTFNPKD 154
H D + VA P +VL+S D I++W E W+C I E GH + + ++P
Sbjct: 4 HEDRVWSVAWSPN-GFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 155 TNTFASASLDRTIKIWNL--GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
T ASAS D T IW+ G + N TL+ H+ V VD+ G L T D +
Sbjct: 63 T-FLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGS--LLATCGRDKSVW 119
Query: 213 VWDYQTKS---CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT--YRLENTL 267
+W+ Q C + HT +V V +HP I+ + S D T++++ + +TL
Sbjct: 120 IWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTL 179
Query: 268 NYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNI 327
VW+I + S RIV D+ T V+I + P + + G ++ KH + + V +
Sbjct: 180 EGHESTVWSISFDGSGDRIVSCSDDKT--VRIWKSYPPGNQE--GVVVSGKHTKWKCVCV 235
Query: 328 KSVGADYEVTD 338
S D + D
Sbjct: 236 LSGYHDRTIYD 246
Score = 159 (61.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 48/167 (28%), Positives = 77/167 (46%)
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG-WMCTQIFEGHSHYVMQVTFNPKD 154
+ H IR + P ++ S+S D +WD + G + C EGH + V V ++
Sbjct: 47 DGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSG 106
Query: 155 TNTFASASLDRTIKIWNLGSPDPN---FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
+ A+ D+++ IW + D + +H + V V + K L + S D T
Sbjct: 107 S-LLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHP--TKEILASCSYDDTI 163
Query: 212 KVW--DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
K++ D SC TLEGH V ++ F I++ S+D TVRIW
Sbjct: 164 KLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 151 (58.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 44/164 (26%), Positives = 75/164 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMA--KSFEVTELPVRSAKF-VARKQWVVA 74
++S+ P ++ ++ + T CIW+ +S + E E V+S + V+
Sbjct: 53 IRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATC 112
Query: 75 GAD-DMFI-RVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW-DWEKG 131
G D ++I V + + V +HT ++ V HPT + S S D IKL+ + E
Sbjct: 113 GRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDD 172
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP 175
W C EGH V ++F+ + S S D+T++IW P
Sbjct: 173 WSCCDTLEGHESTVWSISFDGSG-DRIVSCSDDKTVRIWKSYPP 215
Score = 83 (34.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 226 EGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHAT 259
+ H+ +V+++C+HP + I+ T S+DGTV++W T
Sbjct: 289 KAHSMDVNSICWHPKDENILATCSDDGTVKLWRFT 323
Score = 42 (19.8 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 456 CRLIRRIDVTVKNLYWADSGDLVAIAS-DTSFYILK 490
C L D T+ +++W+ L+A AS D I K
Sbjct: 234 CVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFK 269
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 253 (94.1 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 60/250 (24%), Positives = 112/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +RS K + + +DD+ R+ + T ++K+ H+ +
Sbjct: 488 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 547
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D ++LW + + C ++GH++ V F+P F S DR
Sbjct: 548 SFSPDRNYLLSSSEDGTVRLWSLQT-FTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 605
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H VNC + + Y+ TGS D T ++WD +CV+
Sbjct: 606 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 663
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + TG+ DG V +W + L + V ++ + +
Sbjct: 664 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 723
Query: 286 IVIGYDEGTI 295
+ G + T+
Sbjct: 724 LASGSMDNTV 733
Score = 227 (85.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 59/225 (26%), Positives = 100/225 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+S GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 544 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 603
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 604 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRI 662
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + +TF+P A+ + D + +W++G L H V + + G
Sbjct: 663 FTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 721
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
+ L +GS D+T ++WD + LE T + + H LP
Sbjct: 722 E--ILASGSMDNTVRLWD--AIKAFEDLE--TDDFTTATGHINLP 760
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV A F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 543 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 602
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 603 HDRVARLWATDH-YQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCV 660
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT V ++ F
Sbjct: 661 RIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 718
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 719 RDGEILASGSMDNTVRLWDA 738
Score = 182 (69.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 492 VRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGASFS 550
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S+S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 551 P-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 605
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP + TGS D TVR+W
Sbjct: 606 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 665
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ ++ + + R + G +G +++
Sbjct: 666 HKGPIHSLTFSPNGRFLATGATDGRVLL 693
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 253 (94.1 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 60/250 (24%), Positives = 112/250 (44%)
Query: 46 SQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCV 105
+ + + + VT +RS K + + +DD+ R+ + T ++K+ H+ +
Sbjct: 490 ADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGA 549
Query: 106 AVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
+ P Y+LSSS+D ++LW + + C ++GH++ V F+P F S DR
Sbjct: 550 SFSPDRNYLLSSSEDGTVRLWSLQT-FTCLVGYKGHNYPVWDTQFSPYGYY-FVSGGHDR 607
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
++W P H VNC + + Y+ TGS D T ++WD +CV+
Sbjct: 608 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVRIF 665
Query: 226 EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR 285
GH + ++ F P + TG+ DG V +W + L + V ++ + +
Sbjct: 666 TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEI 725
Query: 286 IVIGYDEGTI 295
+ G + T+
Sbjct: 726 LASGSMDNTV 735
Score = 227 (85.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 59/225 (26%), Positives = 100/225 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V P ++L+S GTV +W+ Q+ T ++ PV +F + V+G
Sbjct: 546 VYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGH 605
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R++ + +++F H + C HP YV + S D ++LWD G C +I
Sbjct: 606 DRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRI 664
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH + +TF+P A+ + D + +W++G L H V + + G
Sbjct: 665 FTGHKGPIHSLTFSPNG-RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 723
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
+ L +GS D+T ++WD + LE T + + H LP
Sbjct: 724 E--ILASGSMDNTVRLWD--AIKAFEDLE--TDDFTTATGHINLP 762
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV A F + ++++ ++D +R+++ T + ++ H + P Y +S
Sbjct: 545 PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGG 604
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +LW + + +IF GH V F+P ++N A+ S DRT+++W++ + +
Sbjct: 605 HDRVARLWATDH-YQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCV 662
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ ++ + + G +L TG+ D +WD V L+GHT V ++ F
Sbjct: 663 RIFTGHKGPIHSLTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 720
Query: 239 PELPIIITGSEDGTVRIWHA 258
+ I+ +GS D TVR+W A
Sbjct: 721 RDGEILASGSMDNTVRLWDA 740
Score = 182 (69.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/208 (26%), Positives = 92/208 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
V+V+ +R V L + SDD+L ++ D EK +I GHS V +F+
Sbjct: 494 VRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMD-EKTASELKILYGHSGPVYGASFS 552
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP--YLITGSDDH 209
P D N S+S D T+++W+L + FT KG N + T Y ++G D
Sbjct: 553 P-DRNYLLSSSEDGTVRLWSLQT----FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDR 607
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
A++W ++ GH +V+ FHP + TGS D TVR+W
Sbjct: 608 VARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG 667
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ ++ + + R + G +G +++
Sbjct: 668 HKGPIHSLTFSPNGRFLATGATDGRVLL 695
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 237 (88.5 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 64/254 (25%), Positives = 120/254 (47%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
L+++ KL + V SV + I +S T+C+W+ +S + + + +
Sbjct: 75 LKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQ 134
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTD-YIRCVAVHPTLPYVLSSSDDMLI 123
F ++V++G +D I +Y+ T + +A Y +A P Y+ S + D +I
Sbjct: 135 FSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGII 194
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + Q EGH+ V + F+P ++ +AS D +K++++ D TL
Sbjct: 195 TIFDVAAGKV-VQTLEGHAMPVRSLCFSP-NSQLLLTASDDGHMKLYDVTHSDVVGTLSG 252
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V CV + G + + S D++ K+WD + C+ T HT V V + P
Sbjct: 253 HASWVLCVAFSEDGK--HFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDK 310
Query: 244 IITGSEDGTVRIWH 257
+ + SED ++ I++
Sbjct: 311 VASASEDKSLNIYY 324
Score = 182 (69.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 63/249 (25%), Positives = 110/249 (44%)
Query: 54 EVTELPVRSAKFVAR-KQWVVAGADDMFIRVYNY---NTMDKVKVFEAHTDYIRCVAVHP 109
E E P K AR K ++V G D ++V++ NT+ + H + VAV
Sbjct: 36 EPEENPFDFDKKEARPKDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSS 95
Query: 110 TLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASL-DRTIK 168
+ SSS D + LWD G + G + V F+P N + + L D I
Sbjct: 96 DGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVD-LWTVQFSP--CNKYVISGLNDGKIS 152
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGH 228
++++ + TLDA Q G + D Y+ +G+ D ++D VQTLEGH
Sbjct: 153 MYSVETGKAEQTLDA-QNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGH 211
Query: 229 THNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI 288
V ++CF P +++T S+DG ++++ T + TL+ V + + + +
Sbjct: 212 AMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFAS 271
Query: 289 GYDEGTIMV 297
+ ++ +
Sbjct: 272 SSSDNSVKI 280
Score = 173 (66.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 56/262 (21%), Positives = 111/262 (42%)
Query: 39 VCIWNYQSQTMAK---SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
V +W+ Q K + L V S + Q + + + D + +++ + DK +
Sbjct: 64 VKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLL 123
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ V P YV+S +D I ++ E G + + Y + + ++P D
Sbjct: 124 SFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSP-DG 182
Query: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
AS ++D I I+++ + TL+ H V + + + L+T SDD K++D
Sbjct: 183 KYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCF--SPNSQLLLTASDDGHMKLYD 240
Query: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVW 275
V TL GH V V F + + S D +V+IW + + +T ++VW
Sbjct: 241 VTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVW 300
Query: 276 AIGYMKSSRRIVIGYDEGTIMV 297
+ Y + ++ ++ ++ +
Sbjct: 301 GVRYSPGNDKVASASEDKSLNI 322
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 252 (93.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 70/267 (26%), Positives = 127/267 (47%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + ++ VR+ + W+V G +++ + N M+ VK++
Sbjct: 167 SGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSN-MNNVKMY 225
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNPK 153
+AH + IR ++ PT +S SDD +++WD+ + C + + GH V V ++P+
Sbjct: 226 QAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHWHPQ 282
Query: 154 DTNTFASASLD--RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
S S D + IKIW+ S TL AH+ V + + G+ +L+T S DH
Sbjct: 283 K-GMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGN--WLVTASRDHLL 339
Query: 212 KVWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNY 269
K++D + + VQ GH S+V +HP + +G DG++ W+ T + +
Sbjct: 340 KLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVET 399
Query: 270 GLER-VWAIGYMKSSRRIVIGYDEGTI 295
+ VW + + + G ++ TI
Sbjct: 400 AHDSIVWTLAWHPLGHILCSGSNDHTI 426
Score = 198 (74.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 56/237 (23%), Positives = 106/237 (44%)
Query: 26 SEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYN 85
++ W++ + G V W + K ++ + +R F V+G+DD +R+++
Sbjct: 199 NDSWMVTGDHGGYVKYWQ-SNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWD 257
Query: 86 YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD--MLIKLWDWEKGWMCTQIFEGHSH 143
+ + +V H ++CV HP ++S S D IK+WD + G + H
Sbjct: 258 FMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSG-IALATLHAHKS 316
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYFTGGDKPYL 202
VM + +N N +AS D +K++++ + + H+K + V + + +
Sbjct: 317 TVMDLKWNDNG-NWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFC 375
Query: 203 ITGSDDHTAKVWDYQTKS---CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
GSD + W+ T CV+T H V + +HP I+ +GS D T++ W
Sbjct: 376 SGGSDG-SILFWNVGTDKEIGCVET--AHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 160 (61.4 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 50/264 (18%), Positives = 116/264 (43%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
P+ + + + +V GA ++N T + + +AH +R + ++++
Sbjct: 148 PIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGD 207
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++++ H + ++F+P D+ F S S D T++IW+
Sbjct: 208 HGGYVKYW--QSNMNNVKMYQAHKEAIRGISFSPTDSK-FVSGSDDGTLRIWDFMRCQEE 264
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA--KVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CV + K +++GS D+ K+WD ++ + TL H V +
Sbjct: 265 RVLRGHGADVKCVHWHP--QKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLK 322
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
++ ++T S D ++++ R E + G ++ ++ + + G +G+
Sbjct: 323 WNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGS 382
Query: 295 IMV-KIGREEPVASMDNS-GKIIW 316
I+ +G ++ + ++ + I+W
Sbjct: 383 ILFWNVGTDKEIGCVETAHDSIVW 406
Score = 154 (59.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 47/209 (22%), Positives = 94/209 (44%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ + P++ ++ GT+ IW++ + V+ + +
Sbjct: 223 KMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQ 282
Query: 69 KQWVVAGADD--MFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K +V+G+ D I++++ + + AH + + + +++++S D L+KL+
Sbjct: 283 KGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLF 342
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V+++P F S D +I WN+G+ ++ AH
Sbjct: 343 DIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHD 402
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
V + + G L +GS+DHT K W
Sbjct: 403 SIVWTLAWHPLGH--ILCSGSNDHTIKFW 429
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 244 (91.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 65/270 (24%), Positives = 126/270 (46%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + + + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D I+++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W------------DWEKGWMCTQIFEGHSHY--VMQVTFNP-----KDTNTFASASLDRT 166
W + E C + S Y + + T + K S S D+T
Sbjct: 261 WVVATKECKAELREHEHVVECIS-WAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 167 IKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
IK+W++ + TL H V V + +GG ++++ +DD T +VWD++ K C++TL
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDFKNKRCMKTLN 377
Query: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 378 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 239 (89.2 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 64/218 (29%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHTG-KL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+ Q
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQ 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + +I + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/309 (21%), Positives = 137/309 (44%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN----- 171
+ G W+ + ++ N + + A+ + ++
Sbjct: 221 VQTGYCVKTFTGHREWV-RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 172 ---LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGH 228
+P+ +++ + G +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 280 ECISWAPESSYSTISEATGSETKK--SGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGH 337
Query: 229 THNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI 288
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 397
Query: 289 GYDEGTIMV 297
G + T+ V
Sbjct: 398 GSVDQTVKV 406
Score = 187 (70.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 59/230 (25%), Positives = 101/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP-----TL--------- 111
+ + ++D +RV+ T + H + C++ P T+
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+ + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 248 (92.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 71/287 (24%), Positives = 130/287 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD P P+ A S + I+ SQ K+F + A F Q +VAG++
Sbjct: 41 VSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLVAGSE 100
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +++++ + ++ FE HT + V +V+S +DD +KLWD
Sbjct: 101 DGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILT- 159
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ HS YV + + + F + S D T+K+++ + + N H + V V F G
Sbjct: 160 FKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDART-NKNVLCVEHGQPVESVLLFPSG 218
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C +++GS D V+I+
Sbjct: 219 G---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKIY 275
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
T+Y++ ++ +Y + ++ +V+G G + VK + E
Sbjct: 276 STTSYKVVHSFDYAAS-ILSLALSHQDETVVVGMTNGILSVKHRKSE 321
Score = 45 (20.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 604 LERANEILPSI--PKEHHNSVA--RFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
L A EI+ I P +SV +F+ +G++E+ I DY+ EL LG +++
Sbjct: 438 LINAAEIIIDIYLPVIGQSSVVDKKFIVLQGLVEKEI------DYQRELLETLGMMDMLF 491
Query: 660 EIATEVQSESKWKQL 674
T S W+ +
Sbjct: 492 ATMTRNGSAPVWEHV 506
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 245 (91.3 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 182 QRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE 241
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 242 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 297
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 298 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 354
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 355 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 408
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 409 SGAYDGKIKVW 419
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 190 NSKGVYCLQY----DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERV 243
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 244 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 297
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 298 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 353
Query: 363 PNG 365
G
Sbjct: 354 KRG 356
Score = 158 (60.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 262 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 318
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 319 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 376
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 377 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 432
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 433 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 470
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 326 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 381
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 382 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 437
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 438 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 468
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 233 (87.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 71/249 (28%), Positives = 116/249 (46%)
Query: 56 TELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKV-----KVFEAHTDYIRCVAVHPT 110
T++ A V +V + D I ++ DK + H+ +++ V +
Sbjct: 15 TDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSD 74
Query: 111 LPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
+ LS S D ++LWD G T+ F GH+ V+ V F+ D SAS DRTIK+W
Sbjct: 75 GQFALSGSWDGELRLWDLATG-ESTRRFVGHTKDVLSVAFST-DNRQIVSASRDRTIKLW 132
Query: 171 N-LGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
N LG + +T+ D H++ V+CV + P +++ S D T KVW+ Q TL
Sbjct: 133 NTLG--ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLA 190
Query: 227 GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLE-----NTLNYGLERVWAI 277
GH+ ++ V P+ + +G +DG + +W Y LE ++L + R W
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLC 250
Query: 278 GYMKSSRRI 286
++S RI
Sbjct: 251 AATENSIRI 259
Score = 182 (69.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 54/223 (24%), Positives = 107/223 (47%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+R++ S V+ V L + L+ + G + +W+ + + F V S F
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEA--HTDYIRCVAVHP-TL-PYVLSSSDDMLI 123
+ +V+ + D I+++N K + EA H +++ CV P TL P ++S+S D +
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
K+W+ + + + GHS Y+ V +P D + AS D I +W+L ++L+A
Sbjct: 176 KVWNLQNCKLRNTL-AGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
G + + Y + + +++ ++WD ++KS V+ L+
Sbjct: 234 ---G-SIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/133 (24%), Positives = 61/133 (45%)
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAH 184
KG MC H+ V + +++ ++S D++I +W L D ++ + H
Sbjct: 8 KGTMCA-----HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
V D D + ++GS D ++WD T + GHT +V +V F + I
Sbjct: 63 SHFVQ--DVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 245 ITGSEDGTVRIWH 257
++ S D T+++W+
Sbjct: 121 VSASRDRTIKLWN 133
Score = 41 (19.5 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 244 IITGSEDGTVRIWHATTY 261
+ +G DG +R+W Y
Sbjct: 309 LFSGYTDGVIRVWGIGRY 326
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 245 (91.3 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 216 QRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE 275
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 276 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 331
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 332 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 389 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 442
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 443 SGAYDGKIKVW 453
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 224 NSKGVYCLQY----DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERV 277
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 278 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 331
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 332 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 387
Query: 363 PNG 365
G
Sbjct: 388 KRG 390
Score = 158 (60.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 296 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 352
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 353 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 410
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 411 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 466
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 467 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 504
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 360 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 415
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 416 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 471
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 472 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 502
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 245 (91.3 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 231 QRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE 290
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 291 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 346
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 404 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 457
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 458 SGAYDGKIKVW 468
Score = 162 (62.1 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 239 NSKGVYCLQY----DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 346
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 347 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 402
Query: 363 PNG 365
G
Sbjct: 403 KRG 405
Score = 158 (60.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 311 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 367
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 425
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 426 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 481
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 482 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 519
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 430
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 431 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 486
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 487 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 517
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 233 (87.1 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 75/262 (28%), Positives = 122/262 (46%)
Query: 72 VVAGADDMFIRVYNYNTMDKV-----KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+V+ + D I ++ DK + H+ ++ V + + LS S D ++LW
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTL---- 181
D G + T+ F GH+ V+ V F+ D SAS DRTIK+WN LG + +T+
Sbjct: 91 DLAAG-VSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRTIKLWNTLG--ECKYTISEGG 146
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
+ H+ V+CV + +P +++ S D T KVW+ TL GHT VS V P+
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 242 PIIITGSEDGTVRIWHATT----YRLE-NTLNYGL----ERVWAIGYMKSSRRIVIGYDE 292
+ +G +DG V +W Y LE N++ + L R W + +I +
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIW-DLES 265
Query: 293 GTIM--VKIGREEPVASMDNSG 312
+I+ +K+ + DNSG
Sbjct: 266 KSIVEDLKVDLKAEAEKADNSG 287
Score = 191 (72.3 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 56/226 (24%), Positives = 109/226 (48%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+R+L S V+ V L + L+ + G + +W+ + + F V S F
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVF-----EAHTDYIRCVAVHP-TL-PYVLSSSDD 120
+ +V+ + D I+++N T+ + K E H D++ CV P TL P ++S+S D
Sbjct: 116 DNRQIVSASRDRTIKLWN--TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 173
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
+K+W+ + + + GH+ YV V +P D + AS D + +W+L ++
Sbjct: 174 KTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYS 231
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
L+A+ ++ + + Y + + +H K+WD ++KS V+ L+
Sbjct: 232 LEANSV-IHALCF---SPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 185 (70.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 56/206 (27%), Positives = 95/206 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW- 128
Q+ ++G+ D +R+++ + F HT + VA ++S+S D IKLW+
Sbjct: 76 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 135
Query: 129 -EKGWMCTQIFEGHSHYVMQVTFNPKDTN-TFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
E + ++ EGH +V V F+P T SAS D+T+K+WNL + TL H
Sbjct: 136 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG 195
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V+ V G +G D +WD + +LE ++ + A+CF P +
Sbjct: 196 YVSTVAVSPDGS--LCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCA 252
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLE 272
+E G ++IW + + L L+
Sbjct: 253 ATEHG-IKIWDLESKSIVEDLKVDLK 277
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 38/153 (24%), Positives = 66/153 (43%)
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAH 184
+G + H+ V + + + SAS D++I +W L D + L H
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
V D D + ++GS D ++WD + GHT +V +V F + I
Sbjct: 63 SHFVE--DVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 245 ITGSEDGTVRIWHATTYRLENTLNYGLE--RVW 275
++ S D T+++W+ T + T++ G E R W
Sbjct: 121 VSASRDRTIKLWN-TLGECKYTISEGGEGHRDW 152
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 244 (91.0 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 199 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 258
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 259 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 314
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 371
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 372 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 425
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 426 SGAYDGKIKVW 436
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 207 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 260
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 314
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 315 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 370
Query: 363 PNG 365
G
Sbjct: 371 KRG 373
Score = 158 (60.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 279 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 335
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 336 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 393
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 394 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 449
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 450 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 487
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 343 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 398
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 399 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 454
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 455 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 485
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 244 (91.0 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 199 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 258
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 259 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 314
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 315 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 371
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 372 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 425
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 426 SGAYDGKIKVW 436
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 207 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 260
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 314
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 315 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 370
Query: 363 PNG 365
G
Sbjct: 371 KRG 373
Score = 158 (60.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 279 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 335
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 336 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 393
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 394 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 449
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 450 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 487
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 343 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 398
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 399 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 454
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 455 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 485
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 235 (87.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 71/297 (23%), Positives = 126/297 (42%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H S+ L S G + +W+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +Y+ T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S DM LWD E G CT F GH+ VM ++ +P D TF S + D + K+W++
Sbjct: 161 SGDMTCALWDIETGQQCTA-FTGHTGDVMSLSLSP-DFRTFISGACDASAKLWDIRDGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN-----V 232
T H+ +N V +F G+ TGSDD T +++D + Q L ++H+ +
Sbjct: 219 KQTFPGHESDINAVAFFPSGNA--FATGSDDATCRLFDIRAD---QELAMYSHDNIICGI 273
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
++V F ++ G +D +W + L RV +G + + G
Sbjct: 274 TSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTG 330
Score = 211 (79.3 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 70/262 (26%), Positives = 116/262 (44%)
Query: 15 SERVKSVDLHPSEPWILASLY--SGT--VC--IWN----YQSQTMAKSFEVT-ELP---- 59
+ +V ++ L S W++ Y SG+ C + N Y +T + V+ ELP
Sbjct: 87 TNKVHAIPLRSS--WVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTG 144
Query: 60 -VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
+ +F+ Q +V + DM +++ T + F HT + +++ P +S +
Sbjct: 145 YLSCCRFLDDNQ-IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGA 203
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D KLWD G MC Q F GH + V F P N FA+ S D T +++++ + D
Sbjct: 204 CDASAKLWDIRDG-MCKQTFPGHESDINAVAFFPSG-NAFATGSDDATCRLFDIRA-DQE 260
Query: 179 FTLDAHQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
+ +H G+ V + G L G DD VWD + L GH + VS +
Sbjct: 261 LAMYSHDNIICGITSVAFSKSGR--LLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCL 318
Query: 236 CFHPELPIIITGSEDGTVRIWH 257
+ + TGS D ++IW+
Sbjct: 319 GVTEDGMAVCTGSWDSFLKIWN 340
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 67/294 (22%), Positives = 127/294 (43%)
Query: 10 KLAQRSERVKSV--DLHPS-EPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+L Q +E++KS + S LA++ S I Q +T ++ + + +
Sbjct: 6 QLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTR-RTLRGHLAKIYAMHWA 64
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + +V+ + D + V++ T +KV + ++ A P+ +V D + ++
Sbjct: 65 SDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIY 124
Query: 127 DW---EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
E ++ GH+ Y+ F D N ++S D T +W++ +
Sbjct: 125 SLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIVTSSGDMTCALWDIETGQQCTAFTG 182
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V + D I+G+ D +AK+WD + C QT GH +++AV F P
Sbjct: 183 HTGDVMSLSL--SPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNA 240
Query: 244 IITGSEDGTVRIWHATTYRLENTLN-YGLERV----WAIGYMKSSRRIVIGYDE 292
TGS+D T R++ R + L Y + + ++ + KS R + GYD+
Sbjct: 241 FATGSDDATCRLFDI---RADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDD 291
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 244 (91.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 218 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 277
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 278 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 333
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 334 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 390
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 391 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 444
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 445 SGAYDGKIKVW 455
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 226 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 279
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 280 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 333
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 334 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 389
Query: 363 PNG 365
G
Sbjct: 390 KRG 392
Score = 158 (60.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 298 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 354
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 355 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 412
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 413 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 468
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 469 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 506
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 362 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 417
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 418 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 473
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 474 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 504
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 244 (91.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 219 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 278
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 279 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 334
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 335 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 391
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 392 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 445
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 446 SGAYDGKIKVW 456
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 227 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 280
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 281 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 334
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 335 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 390
Query: 363 PNG 365
G
Sbjct: 391 KRG 393
Score = 158 (60.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 299 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 355
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 356 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 413
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 414 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 469
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 470 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 507
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 363 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 418
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 419 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 474
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 475 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 505
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 245 (91.3 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 53/198 (26%), Positives = 103/198 (52%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F+A +++ ++DM IR ++ + +++ H + V + P Y S S
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGS 403
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ V + + G YL + +D K+WD + + + L GHT N++++ F
Sbjct: 462 RLFTGHRGPVLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFS 519
Query: 239 PELPIIITGSEDGTVRIW 256
P+ +I + S D +VR+W
Sbjct: 520 PDSSLIASASMDNSVRVW 537
Score = 204 (76.9 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 91 KVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTF 150
++KV H + +LS S+DM I+ WD + T +++GH++ V V
Sbjct: 334 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS-FTNTVLYQGHAYPVWDVDI 392
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+P FAS S DRT ++W+ P H V+CV + + YL TGS D T
Sbjct: 393 SPYSLY-FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKT 449
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++W Q + V+ GH V ++ F P + + ED +++W + L L
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGH 509
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ + ++ + S I + ++ V
Sbjct: 510 TDNITSLTFSPDSSLIASASMDNSVRV 536
Score = 192 (72.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 44/194 (22%), Positives = 87/194 (44%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ S T ++ PV + +G+ D R+++++ ++++ H
Sbjct: 369 WDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ CV HP Y+ + S D ++LW ++G ++F GH V+ + F+P ASA
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNG-KYLASA 486
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
D+ +K+W+L S L H + + + D + + S D++ +VWD + C
Sbjct: 487 GEDQRLKLWDLASGTLFKELRGHTDNITSLTF--SPDSSLIASASMDNSVRVWDIRNTHC 544
Query: 222 VQTLEGHTHNVSAV 235
+G + + V
Sbjct: 545 SAPTDGSSSELVGV 558
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 37/155 (23%), Positives = 78/155 (50%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD+ P + + + T +W++ + + V KF ++ G+
Sbjct: 387 VWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H + +A P Y+ S+ +D +KLWD G + ++
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 506
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
GH+ + +TF+P D++ ASAS+D ++++W++
Sbjct: 507 -RGHTDNITSLTFSP-DSSLIASASMDNSVRVWDI 539
Score = 168 (64.2 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 58/207 (28%), Positives = 90/207 (43%)
Query: 52 SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL 111
+F TE + +A+ + + AG D+ I++++ + K+K D R +H
Sbjct: 263 AFYNTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRSK-KLKPEPHRVDVSR---IHLAC 318
Query: 112 PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
+L DD D + G ++ GH V F D++ S S D +I+ W+
Sbjct: 319 D-ILEEEDDE-----DDDVGTEM-KVLRGHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWD 370
Query: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
LGS H V VD Y +GS D TA++W + ++ GH +
Sbjct: 371 LGSFTNTVLYQGHAYPVWDVDI--SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 232 VSAVCFHPELPIIITGSEDGTVRIWHA 258
V V FHP + TGS D TVR+W A
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSA 455
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 244 (91.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 290
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 291 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 346
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 404 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 457
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 458 SGAYDGKIKVW 468
Score = 161 (61.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 239 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 346
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 347 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 402
Query: 363 PNG 365
G
Sbjct: 403 KRG 405
Score = 158 (60.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 311 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 367
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 425
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 426 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 481
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 482 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 519
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 430
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 431 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 486
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 487 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 517
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 244 (91.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 290
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 291 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 346
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 347 MASATDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 404 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 457
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 458 SGAYDGKIKVW 468
Score = 161 (61.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 239 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + I +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDR---SIAVWD 346
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
++ D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 347 MASATDITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 402
Query: 363 PNG 365
G
Sbjct: 403 KRG 405
Score = 158 (60.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 311 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVL-VGHRAAVN 367
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 368 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 425
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 426 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 481
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 482 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 519
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 430
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 431 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 486
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 487 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 517
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 247 (92.0 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 56/231 (24%), Positives = 112/231 (48%)
Query: 69 KQWVVAGAD-DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
K W + G ++ + + + H+ + V+ P Y+LS S+D ++LW
Sbjct: 486 KLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWS 545
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ + ++GH+ V V F+P + F +AS D+T ++W P H
Sbjct: 546 LDT-YTALVSYKGHTQPVWDVKFSPLG-HYFVTASHDQTARLWATDHIYPLRIFAGHIND 603
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V+CV++ + Y+ TGS D T ++WD T +CV+ GHT++V+ + P+ + +G
Sbjct: 604 VDCVEFHPNSN--YVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASG 661
Query: 248 SEDGTVRIWH-ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
EDG + +W + RL++ + ++++ + + +V G + ++ V
Sbjct: 662 GEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRV 712
Score = 228 (85.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 60/230 (26%), Positives = 103/230 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E RKL S V V P ++L+ TV +W+ + T S++ PV KF
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKF 567
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ V + D R++ + + +++F H + + CV HP YV + S D ++
Sbjct: 568 SPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
WD G C ++F GH++ V + +P D AS D I +W++GS ++ H
Sbjct: 628 WDVHTG-NCVRVFLGHTNSVNCLAVSP-DGRWLASGGEDGIICVWDIGSGRRLKSMRGHA 685
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ--TKSCVQTLEGHTHNVS 233
+ + D L++G D++ +VWD + T E +NV+
Sbjct: 686 RA-SLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTNDAGPEPEAFNNNVN 734
Score = 201 (75.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 47/199 (23%), Positives = 100/199 (50%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV F +++++ ++D +R+++ +T + ++ HT + V P Y +++S
Sbjct: 519 PVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTAS 578
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW + + +IF GH + V V F+P F +S D+T ++W++ + +
Sbjct: 579 HDQTARLWATDHIYPL-RIFAGHINDVDCVEFHPNSNYVFTGSS-DKTCRMWDVHTGNCV 636
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH-NVSAVCF 237
H VNC+ D +L +G +D VWD + ++++ GH ++ ++ F
Sbjct: 637 RVFLGHTNSVNCLA--VSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAF 694
Query: 238 HPELPIIITGSEDGTVRIW 256
+ ++++G D +VR+W
Sbjct: 695 SRDGTVLVSGCADNSVRVW 713
Score = 177 (67.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 61/228 (26%), Positives = 92/228 (40%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW-------------DWEKGWMCTQIFEGH 141
F + + C+ + V + D IKLW D K T+ GH
Sbjct: 457 FHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGH 516
Query: 142 SHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPY 201
S V V+F+P D S S D+T+++W+L + + H + V V + G Y
Sbjct: 517 SGPVYGVSFSP-DNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH--Y 573
Query: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
+T S D TA++W ++ GH ++V V FHP + TGS D T R+W T
Sbjct: 574 FVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTG 633
Query: 262 RLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASM 308
V + R + G ++G I V IG + SM
Sbjct: 634 NCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSM 681
Score = 126 (49.4 bits), Expect = 0.00043, P = 0.00043
Identities = 41/141 (29%), Positives = 66/141 (46%)
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPN-FTLDAH--QKGV 188
+C F ++ + + FN D+ A+ D IK+W+L G P + D H Q+
Sbjct: 452 VCMYTFHNTNNNMTCIEFND-DSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENT 510
Query: 189 NCVDYFTG---G-----DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
+ +G G D YL++ S+D T ++W T + + + +GHT V V F P
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 241 LPIIITGSEDGTVRIWHATTY 261
+T S D T R+W AT +
Sbjct: 571 GHYFVTASHDQTARLW-ATDH 590
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 240 (89.5 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 64/269 (23%), Positives = 124/269 (46%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ + + + + T+ +W++Q ++ + V S
Sbjct: 141 DFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ +V+ + D ++++ T VK F H +++R V + + S S+D +++
Sbjct: 201 MPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRV 260
Query: 126 W------------DWEKGWMCTQIFEGHSH-YVMQVTF--NPKDTNT---FASASLDRTI 167
W + E C +H + + T N K S S D+TI
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTI 320
Query: 168 KIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEG 227
K+W++ + TL H V V + GG ++++ +DD T ++WDY+ K C++TL
Sbjct: 321 KMWDISTGMCLMTLVGHDNWVRGVLFHPGGR--FVVSCADDKTLRIWDYKNKRCMKTLSA 378
Query: 228 HTHNVSAVCFHPELPIIITGSEDGTVRIW 256
H H V+++ FH P ++TGS D TV++W
Sbjct: 379 HEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 233 (87.1 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 62/218 (28%), Positives = 99/218 (45%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+ +
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDF-ERTLKGHTDSVQDISFD-QTGKL 164
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W+
Sbjct: 165 LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTMKMWEVA 222
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T CV+T GH V V + + ++ + S D TVR+W T + L V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKII 315
+ S I G+ K G+ P + K I
Sbjct: 283 SWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTI 320
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/307 (21%), Positives = 131/307 (42%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D +K+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 128 WEKG-----------WMCTQIFEGHSHYVMQVTFNPKDTNTFA------SASLDRTIKIW 170
G W+ + ++ N + + A L +
Sbjct: 221 VATGYCVKTFTGHREWV-RMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
S P + + +G P+L++GS D T K+WD T C+ TL GH +
Sbjct: 280 ECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V V FHP +++ ++D T+RIW R TL+ V ++ + K+S +V G
Sbjct: 340 WVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 291 DEGTIMV 297
+ T+ V
Sbjct: 400 VDQTVKV 406
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 61/230 (26%), Positives = 101/230 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL--------- 111
+ + ++D +RV+ T + H + C++ HPT+
Sbjct: 243 NQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENK 302
Query: 112 ------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
P++LS S D IK+WD G MC GH ++V V F+P + A D+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTG-MCLMTLVGHDNWVRGVLFHPGGRFVVSCAD-DK 360
Query: 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
T++IW+ + TL AH+ V +D+ PY++TGS D T KVW+
Sbjct: 361 TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAS--PYVVTGSVDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 353 DLYPQSLKHNPNGRFVVVCGD 373
D + + + +P GRFVV C D
Sbjct: 338 DNWVRGVLFHPGGRFVVSCAD 358
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 242 (90.2 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 67/246 (27%), Positives = 123/246 (50%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 200 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--I 257
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ NT + + H + + + + + +++ S D I +WD
Sbjct: 258 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 315
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 372
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 373 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 426
Query: 251 GTVRIW 256
G +++W
Sbjct: 427 GKIKVW 432
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 205 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 258
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W T + NTL + E V
Sbjct: 259 TGSSDSTVRVWDVNTGEMLNTLIHHCEAV 287
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 217 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 272
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 273 TGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 329 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 384
Query: 291 DEGTI 295
+ TI
Sbjct: 385 SDNTI 389
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 338 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 395
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 396 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRT 451
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
L H V + + D+ +++ S D T +WD+ Q
Sbjct: 452 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 490
Score = 130 (50.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 61/264 (23%), Positives = 109/264 (41%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 234 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 291
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 292 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 347
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 348 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 403
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY----QTKS-----CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD ++ C++TL H+ V
Sbjct: 404 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRV 459
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 460 FRLQFD-EFQIV-SSSHDDTILIW 481
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 242 (90.2 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 69/251 (27%), Positives = 125/251 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 204 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 263
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ NT + + H + + + L +++ S D I +WD
Sbjct: 264 RV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVWD 319
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 320 MASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 376
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 377 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 430
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 431 SGAYDGKIKVW 441
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 49/183 (26%), Positives = 88/183 (48%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD + C++ L GHT +V +C + +
Sbjct: 212 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERV 265
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
I+TGS D TVR+W T + NTL + E A+ +++ S +++ + +
Sbjct: 266 IVTGSSDSTVRVWDVNTGEVLNTLIHHNE---AVLHLRFSNGLMVTCSKDRSIAVWDMAS 322
Query: 304 PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT-DGERLPLAVKELGTCDLYPQSLKHN 362
P D + + + H VN+ Y V+ G+R + V TC+ + ++L +
Sbjct: 323 PT---DITLRRVLVGHRA--AVNVVDFDDKYIVSASGDRT-IKVWSTSTCE-FVRTLNGH 375
Query: 363 PNG 365
G
Sbjct: 376 KRG 378
Score = 158 (60.7 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 284 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVN 340
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 341 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 398
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 399 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 454
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 455 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 492
Score = 133 (51.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 348 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 403
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 404 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 459
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 460 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 490
>UNIPROTKB|Q8TED0 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 EMBL:AK022849
EMBL:AK074217 EMBL:AC010279 EMBL:BC013064 EMBL:CR457295
IPI:IPI00152708 RefSeq:NP_115551.2 UniGene:Hs.406703
ProteinModelPortal:Q8TED0 SMR:Q8TED0 STRING:Q8TED0
PhosphoSite:Q8TED0 DMDM:296452998 SWISS-2DPAGE:Q8TED0 PaxDb:Q8TED0
PRIDE:Q8TED0 DNASU:84135 Ensembl:ENST00000296792 GeneID:84135
KEGG:hsa:84135 UCSC:uc003kcw.1 GeneCards:GC05P072898
HGNC:HGNC:25758 neXtProt:NX_Q8TED0 PharmGKB:PA142670631
InParanoid:Q8TED0 ChiTaRS:UTP15 GenomeRNAi:84135 NextBio:73441
ArrayExpress:Q8TED0 Bgee:Q8TED0 CleanEx:HS_UTP15
Genevestigator:Q8TED0 GermOnline:ENSG00000164338 Uniprot:Q8TED0
Length = 518
Score = 242 (90.2 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 69/287 (24%), Positives = 132/287 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD P P+ A S + I+ SQ K+F + A F + +VAG++
Sbjct: 41 VSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSE 100
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +++++ + ++ FE HT + V +V+S +DD +KLWD
Sbjct: 101 DGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILT- 159
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ HS YV + + + F + S D T+K+++ + + +++ H + V V F G
Sbjct: 160 FKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVE-HGQPVESVLLFPSG 218
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C +++GS D V+++
Sbjct: 219 G---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY 275
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
T+Y++ ++ +Y + ++ IV+G G + VK + E
Sbjct: 276 STTSYKVVHSFDYAAS-ILSLALAHEDETIVVGMTNGILSVKHRKSE 321
>UNIPROTKB|H0Y8P4 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9606 "Homo sapiens" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364
OMA:QFEGHTK EMBL:AC010279 HGNC:HGNC:25758 ChiTaRS:UTP15
Ensembl:ENST00000509005 Uniprot:H0Y8P4
Length = 545
Score = 242 (90.2 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 69/287 (24%), Positives = 132/287 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD P P+ A S + I+ SQ K+F + A F + +VAG++
Sbjct: 68 VSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSE 127
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +++++ + ++ FE HT + V +V+S +DD +KLWD
Sbjct: 128 DGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILT- 186
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ HS YV + + + F + S D T+K+++ + + +++ H + V V F G
Sbjct: 187 FKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVE-HGQPVESVLLFPSG 245
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C +++GS D V+++
Sbjct: 246 G---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY 302
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
T+Y++ ++ +Y + ++ IV+G G + VK + E
Sbjct: 303 STTSYKVVHSFDYAAS-ILSLALAHEDETIVVGMTNGILSVKHRKSE 348
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 243 (90.6 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 54/204 (26%), Positives = 105/204 (51%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F+A +++ ++DM IR ++ + +++ H + + + P Y S S
Sbjct: 362 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGS 421
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 422 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSV 479
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ V + + G YL + +D K+WD + + + L GHT N++++ F
Sbjct: 480 RLFTGHRGPVLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 537
Query: 239 PELPIIITGSEDGTVRIWHA-TTY 261
P+ +I + S D +VR+W TY
Sbjct: 538 PDSSLIASASMDNSVRVWDIRNTY 561
Score = 204 (76.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 62/280 (22%), Positives = 120/280 (42%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ + ++ P + A + + +W+ +S+ + KS E ++ V ++ D
Sbjct: 289 LNTAEISPDSKLLAAGFDNSCIKLWSLRSKKL-KS-EPHQVDVSRIHLACD---ILEEED 343
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D + N ++K+ H + +LS S+DM I+ WD + T +
Sbjct: 344 DE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS-FTNTVL 397
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
++GH++ V + +P FAS S DRT ++W+ P H V+CV +
Sbjct: 398 YQGHAYPVWDLDISPYSLY-FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 456
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ YL TGS D T ++W Q + V+ GH V ++ F P + + ED +++W
Sbjct: 457 N--YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 514
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ L L + + ++ + S I + ++ V
Sbjct: 515 LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRV 554
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 44/194 (22%), Positives = 87/194 (44%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ S T ++ PV + +G+ D R+++++ ++++ H
Sbjct: 387 WDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 446
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ CV HP Y+ + S D ++LW ++G ++F GH V+ + F+P ASA
Sbjct: 447 VDCVKFHPNSNYLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNG-KYLASA 504
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
D+ +K+W+L S L H + + + D + + S D++ +VWD + C
Sbjct: 505 GEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSSLIASASMDNSVRVWDIRNTYC 562
Query: 222 VQTLEGHTHNVSAV 235
+G + + V
Sbjct: 563 STPADGSSGELVGV 576
Score = 182 (69.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 36/155 (23%), Positives = 78/155 (50%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V +D+ P + + + T +W++ + + V KF ++ G+
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 464
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H + +A P Y+ S+ +D +KLWD G + ++
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 524
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
GH+ + +TF+P D++ ASAS+D ++++W++
Sbjct: 525 -RGHTDNITSLTFSP-DSSLIASASMDNSVRVWDI 557
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 58/207 (28%), Positives = 89/207 (42%)
Query: 52 SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL 111
+F TE + +A+ + + AG D+ I++++ + K+K D R +H
Sbjct: 281 AFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK-KLKSEPHQVDVSR---IHLAC 336
Query: 112 PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
+L DD D G +I GH V F D++ S S D +I+ W+
Sbjct: 337 D-ILEEEDDE-----DDNAGTEM-KILRGHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWD 388
Query: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
LGS H V +D Y +GS D TA++W + ++ GH +
Sbjct: 389 LGSFTNTVLYQGHAYPVWDLDI--SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 446
Query: 232 VSAVCFHPELPIIITGSEDGTVRIWHA 258
V V FHP + TGS D TVR+W A
Sbjct: 447 VDCVKFHPNSNYLATGSTDKTVRLWSA 473
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 243 (90.6 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 65/251 (25%), Positives = 120/251 (47%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ P +++ + +W+ +Q + F E + S F +++V+G+
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D R+++ T + E + +A+ P ++ S D +I++W G + ++
Sbjct: 423 DRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWS-VSGTLVERL 480
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ-KGVNCVDYFTG 196
EGH V + F+P D++ S SLD+TIK+W L + + L A + +G+ C +TG
Sbjct: 481 -EGHKESVYSIAFSP-DSSILLSGSLDKTIKVWELQATR-SVGLSAIKPEGI-CKATYTG 536
Query: 197 G-----------DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
D + ++GS D + + WD QT T +GH ++V +VCF P+
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFA 596
Query: 246 TGSEDGTVRIW 256
+GS D RIW
Sbjct: 597 SGSGDLRARIW 607
Score = 202 (76.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 50/183 (27%), Positives = 94/183 (51%)
Query: 101 YIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 160
Y+R +A P Y+++ ++D IKLWD + +F GH + + F+ + S
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKV-RYVFSGHEQDIYSLDFS-HNGRFIVS 419
Query: 161 ASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
S DRT ++W++ + L+ + GV + + D+ ++ GS D +VW + +
Sbjct: 420 GSGDRTARLWDVETGQCILKLEI-ENGVTAIA-ISPNDQ-FIAVGSLDQIIRVWSV-SGT 475
Query: 221 CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
V+ LEGH +V ++ F P+ I+++GS D T+++W L+ T + GL + G
Sbjct: 476 LVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE-----LQATRSVGLSAIKPEGIC 530
Query: 281 KSS 283
K++
Sbjct: 531 KAT 533
Score = 145 (56.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 44/172 (25%), Positives = 78/172 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V ++ + P++ +I + +W+ S T+ + E + V S F +++G+
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSL 504
Query: 78 DMFIRVYNYNT-----MDKVK-------VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
D I+V+ + +K + HTD++ VAV P + LS S D ++
Sbjct: 505 DKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQF 564
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
WD + G +GH + V+ V F+P D FAS S D +IW++ P
Sbjct: 565 WDLQTGQSYLTC-QGHKNSVISVCFSP-DGRQFASGSGDLRARIWSIDPASP 614
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 242 (90.2 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 53/204 (25%), Positives = 106/204 (51%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F++ +++ ++DM IR ++ + +++ H + + + P Y S+S
Sbjct: 344 PVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASAS 403
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLLDVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSV 461
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ V + + G YL + +D K+WD + + + L GHT N++++ F
Sbjct: 462 RLFTGHRGPVLALAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 239 PELPIIITGSEDGTVRIWHA-TTY 261
P+ +I + S D +VR+W TY
Sbjct: 520 PDSSLIASASMDNSVRVWDIRNTY 543
Score = 210 (79.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 51/184 (27%), Positives = 88/184 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
+LS S+DM I+ WD + + T +++GH++ V + +P FASAS DRT ++W+
Sbjct: 357 LLSCSEDMSIRYWDL-RSFTNTVLYQGHAYPVWDLDISPCSLY-FASASHDRTARLWSFD 414
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS 233
P H V+CV + + YL TGS D T ++W Q + V+ GH V
Sbjct: 415 RTYPLRIYAGHLLDVDCVKFHPNSN--YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVL 472
Query: 234 AVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEG 293
A+ F P + + ED +++W + L L + + ++ + S I +
Sbjct: 473 ALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 294 TIMV 297
++ V
Sbjct: 533 SVRV 536
Score = 190 (71.9 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 37/155 (23%), Positives = 80/155 (51%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V +D+ P + ++ + T +W++ + + L V KF ++ G+
Sbjct: 387 VWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGST 446
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H + +A P Y+ S+ +D +KLWD G + ++
Sbjct: 447 DKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
GH+ + +TF+P D++ ASAS+D ++++W++
Sbjct: 507 -RGHTDNITSLTFSP-DSSLIASASMDNSVRVWDI 539
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/194 (22%), Positives = 87/194 (44%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ +S T ++ PV + + + D R+++++ ++++ H
Sbjct: 369 WDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLD 428
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ CV HP Y+ + S D ++LW ++G ++F GH V+ + F+P ASA
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSTQQG-NSVRLFTGHRGPVLALAFSPNG-KYLASA 486
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
D+ +K+W+L S L H + + + D + + S D++ +VWD + C
Sbjct: 487 GEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSSLIASASMDNSVRVWDIRNTYC 544
Query: 222 VQTLEGHTHNVSAV 235
+G + + V
Sbjct: 545 NAPADGSSSELVGV 558
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 242 (90.2 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 67/246 (27%), Positives = 123/246 (50%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 258 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--I 315
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ NT + + H + + + + + +++ S D I +WD
Sbjct: 316 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 373
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 374 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 430
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 431 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 484
Query: 251 GTVRIW 256
G +++W
Sbjct: 485 GKIKVW 490
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 263 KGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVII 316
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W T + NTL + E V
Sbjct: 317 TGSSDSTVRVWDVNTGEMLNTLIHHCEAV 345
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 275 IVSGLRDNTIKIWD-KNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 330
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 331 TGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 387 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 442
Query: 291 DEGTI 295
+ TI
Sbjct: 443 SDNTI 447
Score = 162 (62.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 396 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 453
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 454 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 509
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
L H V + + D+ +++ S D T +WD+ Q
Sbjct: 510 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 548
Score = 130 (50.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 292 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 349
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 350 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 405
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 406 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 461
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 462 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 517
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 518 FRLQFD-EFQIV-SSSHDDTILIW 539
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 242 (90.2 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 67/246 (27%), Positives = 123/246 (50%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 263 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--I 320
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ NT + + H + + + + + +++ S D I +WD
Sbjct: 321 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 378
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 379 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 435
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 436 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 489
Query: 251 GTVRIW 256
G +++W
Sbjct: 490 GKIKVW 495
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 268 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 321
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W T + NTL + E V
Sbjct: 322 TGSSDSTVRVWDVNTGEMLNTLIHHCEAV 350
Score = 163 (62.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 280 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 335
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 336 TGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 392 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 447
Query: 291 DEGTI 295
+ TI
Sbjct: 448 SDNTI 452
Score = 162 (62.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 401 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 458
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 459 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 514
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
L H V + + D+ +++ S D T +WD+ Q
Sbjct: 515 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 553
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 297 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 354
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 355 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 410
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 411 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 466
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 467 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 522
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 523 FRLQFD-EFQIV-SSSHDDTILIW 544
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 239 (89.2 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 53/167 (31%), Positives = 85/167 (50%)
Query: 97 AHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN 156
+H D + CVA HP + S S+D IK+WDWE G + + +GH V + + + N
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEI-ERTLKGHIRGVSGLDYGGQKGN 170
Query: 157 TF-ASASLDRTIKIWNLGSPDPNF-TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
T AS S D TIK+W+ N TL H V+ V + T D +LI+ S D T ++W
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDN-HLISASRDGTLRIW 229
Query: 215 DYQTKSCVQTLEGHTHN-VSAVCFHPELPIIITGSEDGTVRIWHATT 260
D T CV+ ++ T + + V + +++G D + +W ++
Sbjct: 230 DVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 147 (56.8 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 41/172 (23%), Positives = 73/172 (42%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVL--SSSDDMLIKLWDWE 129
+ +G++D I+++++ + + + H + + L S S D+ IKLWD
Sbjct: 129 LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPS 188
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
K + + GH H V V F + N SAS D T++IW++ + F + +
Sbjct: 189 KDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVST---GFCVKVIKSATE 245
Query: 190 CV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
D D +L++G D VW+ + L GH + + F P
Sbjct: 246 SWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAP 297
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 170 WNLGSPDPNFTLDAHQKGVNCVDY---FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
W L P TL +H+ V CV + FT L +GS+D T K+WD++ +TL+
Sbjct: 100 W-LPKPSSTHTLTSHRDAVTCVAFHPVFTS-----LASGSEDCTIKIWDWELGEIERTLK 153
Query: 227 GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATT-YRLENTLNYGLERVWAIGYMKSS 283
GH VS + + + ++ + S D T+++W + Y TL+ V ++ ++ S+
Sbjct: 154 GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSN 213
Query: 284 -RRIVIGYDEGTIMV 297
++ +GT+ +
Sbjct: 214 DNHLISASRDGTLRI 228
Score = 105 (42.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 40/204 (19%), Positives = 88/204 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSG----TVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
L + V V HP + SL SG T+ IW+++ + ++ + V +
Sbjct: 110 LTSHRDAVTCVAFHP----VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG 165
Query: 67 ARK-QWVVAG-ADDMFIRVYNYNT-MDKVKVFEAHTDYIRCVAVHPTLP-YVLSSSDDML 122
+K ++A + D+ I++++ + ++ H + V + +++S+S D
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 123 IKLWDWEKGWMCTQIFEGHSH-YVMQVTFNPK-DTNTFASASLDRTIKIWNLGSPDPNFT 180
+++WD G+ C ++ + + ++ V+ P D S D+ I +W + S +P
Sbjct: 226 LRIWDVSTGF-CVKVIKSATESWIRDVS--PSFDGKWLVSGGRDQAITVWEVSSAEPKAA 282
Query: 181 LDAHQKGVNCVDYFTGGDKPYLIT 204
L H+ + C + +L T
Sbjct: 283 LLGHENFIECCVFAPPASYEHLAT 306
Score = 104 (41.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
++ TG+ D T K+W+ + + ++TL GH + V + FHP + + S+D T+R W +
Sbjct: 322 FVATGARDKTIKLWEARGR-LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 261 Y-RLENTLN 268
RL T++
Sbjct: 381 EGRLVKTIS 389
Score = 103 (41.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 159 ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-Q 217
A+ + D+TIK+W TL H V + + GG YL + SDD T + WD Q
Sbjct: 324 ATGARDKTIKLWEARGRLIK-TLHGHDNWVRGLVFHPGGK--YLFSVSDDKTIRCWDLSQ 380
Query: 218 TKSCVQTLEG-HTHNVSAVCFHP 239
V+T+ G H H VS + + P
Sbjct: 381 EGRLVKTISGAHEHFVSCIRWAP 403
Score = 85 (35.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFE-VTELPVRSAKFV 66
R L+ V SV L ++ ++++ GT+ IW+ + K + TE +R
Sbjct: 195 RTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPS 254
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPY 113
+W+V+G D I V+ ++ + H ++I C P Y
Sbjct: 255 FDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASY 301
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 239 (89.2 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 53/167 (31%), Positives = 85/167 (50%)
Query: 97 AHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN 156
+H D + CVA HP + S S+D IK+WDWE G + + +GH V + + + N
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEI-ERTLKGHIRGVSGLDYGGQKGN 170
Query: 157 TF-ASASLDRTIKIWNLGSPDPNF-TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
T AS S D TIK+W+ N TL H V+ V + T D +LI+ S D T ++W
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDN-HLISASRDGTLRIW 229
Query: 215 DYQTKSCVQTLEGHTHN-VSAVCFHPELPIIITGSEDGTVRIWHATT 260
D T CV+ ++ T + + V + +++G D + +W ++
Sbjct: 230 DVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Score = 147 (56.8 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 41/172 (23%), Positives = 73/172 (42%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVL--SSSDDMLIKLWDWE 129
+ +G++D I+++++ + + + H + + L S S D+ IKLWD
Sbjct: 129 LASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPS 188
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
K + + GH H V V F + N SAS D T++IW++ + F + +
Sbjct: 189 KDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVST---GFCVKVIKSATE 245
Query: 190 CV--DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
D D +L++G D VW+ + L GH + + F P
Sbjct: 246 SWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAP 297
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 170 WNLGSPDPNFTLDAHQKGVNCVDY---FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
W L P TL +H+ V CV + FT L +GS+D T K+WD++ +TL+
Sbjct: 100 W-LPKPSSTHTLTSHRDAVTCVAFHPVFTS-----LASGSEDCTIKIWDWELGEIERTLK 153
Query: 227 GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATT-YRLENTLNYGLERVWAIGYMKSS 283
GH VS + + + ++ + S D T+++W + Y TL+ V ++ ++ S+
Sbjct: 154 GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSN 213
Query: 284 -RRIVIGYDEGTIMV 297
++ +GT+ +
Sbjct: 214 DNHLISASRDGTLRI 228
Score = 105 (42.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 40/204 (19%), Positives = 88/204 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSG----TVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
L + V V HP + SL SG T+ IW+++ + ++ + V +
Sbjct: 110 LTSHRDAVTCVAFHP----VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG 165
Query: 67 ARK-QWVVAG-ADDMFIRVYNYNT-MDKVKVFEAHTDYIRCVAVHPTLP-YVLSSSDDML 122
+K ++A + D+ I++++ + ++ H + V + +++S+S D
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 123 IKLWDWEKGWMCTQIFEGHSH-YVMQVTFNPK-DTNTFASASLDRTIKIWNLGSPDPNFT 180
+++WD G+ C ++ + + ++ V+ P D S D+ I +W + S +P
Sbjct: 226 LRIWDVSTGF-CVKVIKSATESWIRDVS--PSFDGKWLVSGGRDQAITVWEVSSAEPKAA 282
Query: 181 LDAHQKGVNCVDYFTGGDKPYLIT 204
L H+ + C + +L T
Sbjct: 283 LLGHENFIECCVFAPPASYEHLAT 306
Score = 104 (41.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
++ TG+ D T K+W+ + + ++TL GH + V + FHP + + S+D T+R W +
Sbjct: 322 FVATGARDKTIKLWEARGR-LIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQ 380
Query: 261 Y-RLENTLN 268
RL T++
Sbjct: 381 EGRLVKTIS 389
Score = 103 (41.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 159 ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-Q 217
A+ + D+TIK+W TL H V + + GG YL + SDD T + WD Q
Sbjct: 324 ATGARDKTIKLWEARGRLIK-TLHGHDNWVRGLVFHPGGK--YLFSVSDDKTIRCWDLSQ 380
Query: 218 TKSCVQTLEG-HTHNVSAVCFHP 239
V+T+ G H H VS + + P
Sbjct: 381 EGRLVKTISGAHEHFVSCIRWAP 403
Score = 85 (35.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFE-VTELPVRSAKFV 66
R L+ V SV L ++ ++++ GT+ IW+ + K + TE +R
Sbjct: 195 RTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPS 254
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPY 113
+W+V+G D I V+ ++ + H ++I C P Y
Sbjct: 255 FDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASY 301
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 242 (90.2 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 51/198 (25%), Positives = 104/198 (52%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F+A +++ ++DM IR ++ + +++ H + + + P Y S+S
Sbjct: 340 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASAS 399
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 400 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSV 457
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ V + + G YL + +D K+WD + + + L GHT N++++ F
Sbjct: 458 RLFTGHRGPVLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 515
Query: 239 PELPIIITGSEDGTVRIW 256
P+ ++ + S D +VR+W
Sbjct: 516 PDSSLVASASMDNSVRVW 533
Score = 207 (77.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 87 NTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVM 146
N ++KV H + +LS S+DM I+ WD + T +++GH++ V
Sbjct: 326 NLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS-FTNTVLYQGHAYPVW 384
Query: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
+ +P FASAS DRT ++W+ P H V+CV + + YL TGS
Sbjct: 385 DLDISPHSLY-FASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGS 441
Query: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENT 266
D T ++W Q + V+ GH V ++ F P + + ED +++W + L
Sbjct: 442 TDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKE 501
Query: 267 LNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
L + + ++ + S + + ++ V
Sbjct: 502 LRGHTDNITSLTFSPDSSLVASASMDNSVRV 532
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 43/194 (22%), Positives = 87/194 (44%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ S T ++ PV + + + D R+++++ ++++ H
Sbjct: 365 WDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLAD 424
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ CV HP Y+ + S D ++LW ++G ++F GH V+ + F+P ASA
Sbjct: 425 VDCVKFHPNSNYLATGSTDKTVRLWSTQQG-NSVRLFTGHRGPVLSLAFSPNG-KYLASA 482
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
D+ +K+W+L S L H + + + D + + S D++ +VWD ++ C
Sbjct: 483 GEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSSLVASASMDNSVRVWDIRSSHC 540
Query: 222 VQTLEGHTHNVSAV 235
+G + + V
Sbjct: 541 STPADGSSSELVGV 554
Score = 186 (70.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 41/179 (22%), Positives = 87/179 (48%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V +D+ P + ++ + T +W++ + + V KF ++ G+
Sbjct: 383 VWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 442
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H + +A P Y+ S+ +D +KLWD G + ++
Sbjct: 443 DKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 502
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
GH+ + +TF+P D++ ASAS+D ++++W++ S + D + V +TG
Sbjct: 503 -RGHTDNITSLTFSP-DSSLVASASMDNSVRVWDIRSSHCSTPADGSSSEL--VGVYTG 557
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 242 (90.2 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 52/198 (26%), Positives = 103/198 (52%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F+A +++ ++DM IR ++ + +++ H + V + P Y S S
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGS 403
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ V + + G YL + +D K+WD + + + L GHT +++++ F
Sbjct: 462 RLFTGHRGPVLSLSFSPNGK--YLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFS 519
Query: 239 PELPIIITGSEDGTVRIW 256
P+ +I + S D +VR+W
Sbjct: 520 PDSGLIASASMDNSVRVW 537
Score = 208 (78.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 54/211 (25%), Positives = 94/211 (44%)
Query: 87 NTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVM 146
NT ++K+ H + +LS S+DM I+ WD + T +++GH++ V
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS-FTNTVLYQGHAYPVW 388
Query: 147 QVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
V +P FAS S DRT ++W+ P H V+CV + + YL TGS
Sbjct: 389 DVDISPFSLY-FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGS 445
Query: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENT 266
D T ++W Q + V+ GH V ++ F P + + ED +++W + L
Sbjct: 446 TDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKE 505
Query: 267 LNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
L + + ++ + S I + ++ V
Sbjct: 506 LRGHTDSITSLAFSPDSGLIASASMDNSVRV 536
Score = 189 (71.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 44/194 (22%), Positives = 89/194 (45%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ S T ++ PV + +G+ D R+++++ ++++ H
Sbjct: 369 WDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ CV HP Y+ + S D ++LW ++G ++F GH V+ ++F+P ASA
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLSFSPNG-KYLASA 486
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
D+ +K+W+L S L H + + + D + + S D++ +VWD ++ C
Sbjct: 487 GEDQRLKLWDLASGTLFKELRGHTDSITSLAF--SPDSGLIASASMDNSVRVWDIRSTCC 544
Query: 222 VQTLEGHTHNVSAV 235
+G + + V
Sbjct: 545 NTPADGSSGELVGV 558
Score = 182 (69.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 42/179 (23%), Positives = 84/179 (46%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD+ P + + + T +W++ + + V KF ++ G+
Sbjct: 387 VWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H + ++ P Y+ S+ +D +KLWD G + ++
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 506
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
GH+ + + F+P D+ ASAS+D ++++W++ S N D G V +TG
Sbjct: 507 -RGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCNTPADG-SSG-ELVGVYTG 561
Score = 168 (64.2 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 57/207 (27%), Positives = 90/207 (43%)
Query: 52 SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL 111
+F TE + +A+ + + + AG D+ I++++ + K+K H D R TL
Sbjct: 263 AFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSK-KLKSEPHHVDTSRIRLACDTL 321
Query: 112 PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
+ D+ ++ +I GH V F D++ S S D +I+ W+
Sbjct: 322 EEEENEEDNTGTEM----------KILRGHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWD 370
Query: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
LGS H V VD Y +GS D TA++W + ++ GH +
Sbjct: 371 LGSFTNTVLYQGHAYPVWDVDI--SPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 232 VSAVCFHPELPIIITGSEDGTVRIWHA 258
V V FHP + TGS D TVR+W A
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSA 455
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 242 (90.2 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 54/204 (26%), Positives = 105/204 (51%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F+A +++ ++DM IR ++ + +++ H + + + P Y S S
Sbjct: 344 PVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGS 403
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 404 HDRTARLWSFDRTYPL-RIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H+ V + + G YL + +D K+WD + + + L GHT N++++ F
Sbjct: 462 RLFTGHRGPVLSLAFSPNGK--YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 519
Query: 239 PELPIIITGSEDGTVRIWHA-TTY 261
P+ +I + S D +VR+W TY
Sbjct: 520 PDSGLIASASMDNSVRVWDIRNTY 543
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 62/280 (22%), Positives = 120/280 (42%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ + ++ P + A + + +W+ +S+ + KS E ++ V ++ D
Sbjct: 271 LNTAEISPDSKLLAAGFDNSCIKLWSLRSKKL-KS-EPHQVDVSRIHLACD---ILEEED 325
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D + N ++K+ H + +LS S+DM I+ WD + T +
Sbjct: 326 DE-----DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGS-FTNTVL 379
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
++GH++ V + +P FAS S DRT ++W+ P H V+CV +
Sbjct: 380 YQGHAYPVWDLDISPYSLY-FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ YL TGS D T ++W Q + V+ GH V ++ F P + + ED +++W
Sbjct: 439 N--YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ L L + + ++ + S I + ++ V
Sbjct: 497 LASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRV 536
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 44/194 (22%), Positives = 87/194 (44%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W+ S T ++ PV + +G+ D R+++++ ++++ H
Sbjct: 369 WDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ CV HP Y+ + S D ++LW ++G ++F GH V+ + F+P ASA
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNG-KYLASA 486
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
D+ +K+W+L S L H + + + D + + S D++ +VWD + C
Sbjct: 487 GEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSGLIASASMDNSVRVWDIRNTYC 544
Query: 222 VQTLEGHTHNVSAV 235
+G + + V
Sbjct: 545 SAPADGSSSELVGV 558
Score = 181 (68.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 36/155 (23%), Positives = 77/155 (49%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V +D+ P + + + T +W++ + + V KF ++ G+
Sbjct: 387 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H + +A P Y+ S+ +D +KLWD G + ++
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
GH+ + +TF+P D+ ASAS+D ++++W++
Sbjct: 507 -RGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI 539
Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 58/207 (28%), Positives = 89/207 (42%)
Query: 52 SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL 111
+F TE + +A+ + + AG D+ I++++ + K+K D R +H
Sbjct: 263 AFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK-KLKSEPHQVDVSR---IHLAC 318
Query: 112 PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
+L DD D G +I GH V F D++ S S D +I+ W+
Sbjct: 319 D-ILEEEDDE-----DDNAGTEM-KILRGHCGPVYSTRFLA-DSSGLLSCSEDMSIRYWD 370
Query: 172 LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
LGS H V +D Y +GS D TA++W + ++ GH +
Sbjct: 371 LGSFTNTVLYQGHAYPVWDLDI--SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 232 VSAVCFHPELPIIITGSEDGTVRIWHA 258
V V FHP + TGS D TVR+W A
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSA 455
>UNIPROTKB|A7MB12 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:BC151279 IPI:IPI00703711 RefSeq:NP_001094598.1
UniGene:Bt.13342 ProteinModelPortal:A7MB12 STRING:A7MB12
Ensembl:ENSBTAT00000036838 GeneID:526343 KEGG:bta:526343 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 InParanoid:A7MB12 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 NextBio:20874350 Uniprot:A7MB12
Length = 519
Score = 244 (91.0 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 70/287 (24%), Positives = 132/287 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD P P+ A S + I+ SQ K+F + A F + +VAG++
Sbjct: 41 VSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSE 100
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +++++ + ++ FE HT + V +V+S +DD +KLWD
Sbjct: 101 DGGVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPNSKEILT- 159
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ HS YV + +T+ F + S D T+K+++ + +++ H + V V F G
Sbjct: 160 FKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDARTNQSVISVE-HGQPVESVLLFPSG 218
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C +++GS D V+++
Sbjct: 219 G---LLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY 275
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
T+Y++ ++ +Y + ++ IV+G G + VK + E
Sbjct: 276 STTSYKVVHSFDYTAS-ILSLALAHEDETIVVGMTNGILSVKHRKSE 321
Score = 43 (20.2 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 624 RFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSES 669
+FL +G++E+ I DY+ EL LG +++ AT + ES
Sbjct: 462 KFLILQGLVEKEI------DYQRELLETLGMMDML--FATMTRKES 499
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 242 (90.2 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 67/246 (27%), Positives = 123/246 (50%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 299 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--I 356
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ NT + + H + + + + + +++ S D I +WD
Sbjct: 357 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 414
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 472 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 525
Query: 251 GTVRIW 256
G +++W
Sbjct: 526 GKIKVW 531
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W T + NTL + E V
Sbjct: 358 TGSSDSTVRVWDVNTGEMLNTLIHHCEAV 386
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 316 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 371
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 372 TGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 428 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 291 DEGTI 295
+ TI
Sbjct: 484 SDNTI 488
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 494
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 495 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
L H V + + D+ +++ S D T +WD+ Q
Sbjct: 551 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 333 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 390
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 391 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 446
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 447 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 503 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 558
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 559 FRLQFD-EFQIV-SSSHDDTILIW 580
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 242 (90.2 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 67/246 (27%), Positives = 123/246 (50%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 299 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--I 356
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ NT + + H + + + + + +++ S D I +WD
Sbjct: 357 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 414
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 472 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 525
Query: 251 GTVRIW 256
G +++W
Sbjct: 526 GKIKVW 531
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/89 (40%), Positives = 50/89 (56%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W T + NTL + E V
Sbjct: 358 TGSSDSTVRVWDVNTGEMLNTLIHHCEAV 386
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 316 IVSGLRDNTIKIWD-KNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 371
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 372 TGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 428 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 291 DEGTI 295
+ TI
Sbjct: 484 SDNTI 488
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 494
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 495 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
L H V + + D+ +++ S D T +WD+ Q
Sbjct: 551 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 333 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLR 390
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 391 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 446
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 447 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 503 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 558
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 559 FRLQFD-EFQIV-SSSHDDTILIW 580
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 242 (90.2 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 65/269 (24%), Positives = 122/269 (45%)
Query: 82 RVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEG- 140
++Y +D + HT + VA HP LP +SS D +++++ + + +G
Sbjct: 273 QLYGPRKLDTITTISGHTGRLWSVAAHPMLPLFATSSQDKSVRIYN-SNTYNLVHVIDGF 331
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LDAHQKGVNCVDYFTGGD 198
H+ + +V + P + A AS D + I D T L+ H+ V C+ + G+
Sbjct: 332 HTRSIRRVAWRPIERPVLAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCNGN 391
Query: 199 KPYLITGSDDHTAKVWDYQTKS---CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
YL T S D + +W+ C+ L+ HT +V V +HP ++++GS D ++
Sbjct: 392 --YLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICF 449
Query: 256 WH--ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIM--VKIGREEPVASMDNS 311
W + L L VWA+ + + + ++G + +KI E VA++D++
Sbjct: 450 WRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLWIKISSNEDVATIDST 509
Query: 312 GKIIWAKHNEI-QTVNIKSV--GADYEVT 337
+ A E Q ++ + GA Y ++
Sbjct: 510 NILRPALQEEWKQQTSLPHIHKGAVYTIS 538
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 56/190 (29%), Positives = 90/190 (47%)
Query: 76 ADDMFIRVYNYNTMDKVKVFEA-HTDYIRCVAVHPT-LPYVLSSSDDMLIKLWDW-EKGW 132
+ D +R+YN NT + V V + HT IR VA P P + +S D ++ + + + W
Sbjct: 309 SQDKSVRIYNSNTYNLVHVIDGFHTRSIRRVAWRPIERPVLAVASFDSVVSINEKIDDDW 368
Query: 133 MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF----TLDAHQKGV 188
CT EGH + V + ++ N A+ S D+++ IW + D F L H + V
Sbjct: 369 ECTAALEGHENEVKCIAWSCNG-NYLATCSRDKSVWIWE-ATEDDEFDCLAVLQEHTQDV 426
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVW--DYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V + D L++GS D++ W D + L+GHT+ V A+ F P + +
Sbjct: 427 KVVTWHPTED--LLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLAS 484
Query: 247 GSEDGTVRIW 256
DG V +W
Sbjct: 485 ADNDGNVFLW 494
>UNIPROTKB|F1S2K2 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GeneTree:ENSGT00390000004228
OMA:QFEGHTK EMBL:CU694283 Ensembl:ENSSSCT00000015368 Uniprot:F1S2K2
Length = 518
Score = 239 (89.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 68/287 (23%), Positives = 131/287 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V VD P P+ A S + I+ SQ K+F + A F + ++AG++
Sbjct: 41 VSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLIAGSE 100
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +++++ + ++ FE HT + V +V+S +DD +KLWD
Sbjct: 101 DGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILT- 159
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+ HS YV + + + F + S D T+K+++ + +++ H + V V F G
Sbjct: 160 FKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNQSVISVE-HGQPVESVLLFPSG 218
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C +++GS D V+++
Sbjct: 219 G---LLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY 275
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE 303
T+Y++ ++ +Y + ++ IV+G G + VK + E
Sbjct: 276 STTSYKVVHSFDYAAS-ILSLALAHEDETIVVGMTNGILSVKHRKSE 321
Score = 47 (21.6 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 624 RFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGK 683
+FL +G++E+ I DY+ EL LG +++ T +S S +Q + + +
Sbjct: 462 KFLLLQGLVEKEI------DYQRELLETLGMMDMLFATMTRKESTSVLQQTPDGFLENKR 515
Query: 684 LE 685
+E
Sbjct: 516 IE 517
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 239 (89.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 71/261 (27%), Positives = 119/261 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPS----EPWILASL---YSGTVCIWNYQSQTMAKSFEVT-E 57
E+K+ L + V V L P E ++A + G V +W + ++ ++T
Sbjct: 294 ELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIA--DITGH 351
Query: 58 LPVRSAK--FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVL 115
+P R +K F +++ D R+++ +V E H + C++ H ++
Sbjct: 352 MPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLV 411
Query: 116 SSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP 175
+ D ++WD G C EGH V V F+P + A+ S D T KIW+L
Sbjct: 412 TGGLDAFGRVWDLRTG-RCIMFLEGHLGAVFGVDFSPNGFH-IATGSQDNTCKIWDLRRR 469
Query: 176 DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
P +T+ AH ++ V Y +L+T S D T K+W +T ++TL+GH + V +V
Sbjct: 470 QPVYTIPAHTNLISDVKYQQECGS-FLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISV 528
Query: 236 CFHPELPIIITGSEDGTVRIW 256
P I T S D T ++W
Sbjct: 529 DIAPNSQYIATTSFDRTFKLW 549
Score = 217 (81.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 68/268 (25%), Positives = 113/268 (42%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP-------TL 111
PV SA F ++ + ++++ + + H Y+ VA+ P +
Sbjct: 263 PVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENV 322
Query: 112 PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHS-HYVMQVTFNPKDTNTFASASLDRTIKIW 170
+ S D +KLW + I GH H V +V F+P A+A D + ++W
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADI-TGHMPHRVSKVAFHPSG-RFLATACYDSSWRLW 380
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
+L + H K V+C+ Y + G L+TG D +VWD +T C+ LEGH
Sbjct: 381 DLEQKTEVLHQEGHAKPVHCLSYHSDGS--VLVTGGLDAFGRVWDLRTGRCIMFLEGHLG 438
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKS--SRRIVI 288
V V F P I TGS+D T +IW + T+ + + Y + S +
Sbjct: 439 AVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTC 498
Query: 289 GYDEGTIMVKIGREEPVASMD-NSGKII 315
YD T + +P+ ++ + K+I
Sbjct: 499 SYDSTTKIWSNKTWQPLKTLQGHDNKVI 526
Score = 213 (80.0 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 71/281 (25%), Positives = 132/281 (46%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQS----QTM-AKSFEVTELPVRSAKFVARKQWV 72
V S +L S +SG +W+ QT+ + V + +R A ++ V
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPG-VKADEENV 322
Query: 73 VA---GADDMFIRVYNYNTMDKVKVFEAHTDY-IRCVAVHPTLPYVLSSSDDMLIKLWDW 128
VA G D ++++ +N + + H + + VA HP+ ++ ++ D +LWD
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Query: 129 EKGWMCTQIF--EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
E+ T++ EGH+ V ++++ D + + LD ++W+L + L+ H
Sbjct: 383 EQK---TEVLHQEGHAKPVHCLSYH-SDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLG 438
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL-PIII 245
V VD+ G ++ TGS D+T K+WD + + V T+ HT+ +S V + E ++
Sbjct: 439 AVFGVDFSPNGF--HIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLV 496
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRI 286
T S D T +IW T++ TL +V ++ +S+ I
Sbjct: 497 TCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYI 537
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 236 (88.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 54/169 (31%), Positives = 84/169 (49%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+ ++D IR++++ T + + + HTD ++ VA + S S D+ IKLWD+++
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
+ C + GH H V V F P SAS DRTIK+W + + T H++ V V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
G T S+D T +VW +K C L H H V + + PE
Sbjct: 242 RVHIEGS--IFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPE 288
Score = 235 (87.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 68/230 (29%), Positives = 109/230 (47%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
QS K+ + V S FV +V++ + D I+++ T VK + H +++R
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRM 240
Query: 105 VAVH------------PTLPYVLSSSDDMLIKLWDWEKGWMCTQIF-EGHSHYVMQVTF- 150
V VH T+ L++S D ++L D E C E + + +
Sbjct: 241 VRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGA 300
Query: 151 -NPKDTNT---FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGS 206
N K + AS S D+TI+IW++ TL H V + + GG YL++ S
Sbjct: 301 DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGK--YLVSAS 358
Query: 207 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
DD T +VWD + K C++TL H H +++ FH P +I+GS D TV++W
Sbjct: 359 DDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 229 (85.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 55/160 (34%), Positives = 82/160 (51%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H I V HP ++S+S+D I++WD+E G + +GH+ V V F+ +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEY-ERSLKGHTDSVQDVAFDAQG-KL 164
Query: 158 FASASLDRTIKIWNLG-SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
AS S D +IK+W+ S + T+ H V+ V + GD Y+++ S D T K+W+
Sbjct: 165 LASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWEV 222
Query: 217 QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
T CV+T GH V V H E I T S D T+R+W
Sbjct: 223 ATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 194 (73.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 47/185 (25%), Positives = 91/185 (49%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L + V HP ++++ T+ IW++++ +S + V+ F A
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Query: 68 RKQWVVAGADDMFIRVYNYN-TMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + + + D+ I+++++ + + +K H + VA P YVLS+S D IK+W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ G+ C + + GH +V V + + + FA+ S D+TI++W S D L H+
Sbjct: 221 EVATGY-CVKTYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKDCKVELRDHEH 278
Query: 187 GVNCV 191
V C+
Sbjct: 279 TVECI 283
Score = 188 (71.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 60/219 (27%), Positives = 99/219 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P+ ++L++ T+ +W + K++ VR + ++
Sbjct: 196 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSN 255
Query: 78 DMFIRVYNYNTMD-KVKVFEAHTDYIRCVAVHPTL--------------------PYVLS 116
D IRV+ N+ D KV++ + H + C+A P P++ S
Sbjct: 256 DQTIRVWLTNSKDCKVELRD-HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLAS 314
Query: 117 SSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD 176
S D I++WD G +C GH ++V + F+P SAS D+TI++W+L +
Sbjct: 315 GSRDKTIRIWDVSVG-LCLLTLSGHDNWVRGLAFHPGG-KYLVSASDDKTIRVWDLRNKR 372
Query: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
TL AHQ +D+ PY+I+GS D T KVW+
Sbjct: 373 CMKTLYAHQHFCTSIDFHKA--HPYVISGSVDQTVKVWE 409
Score = 183 (69.5 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 45/137 (32%), Positives = 68/137 (49%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH + +V F+P SAS D TI+IW+ + + +L H V V + G
Sbjct: 106 GHRASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK- 163
Query: 200 PYLITGSDDHTAKVWDYQTK-SCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHA 258
L + S D + K+WD+Q C++T+ GH HNVS+V F P +++ S D T+++W
Sbjct: 164 -LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Query: 259 TTYRLENTLNYGLERVW 275
T T Y R W
Sbjct: 223 ATGYCVKT--YTGHREW 237
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 54/227 (23%), Positives = 95/227 (41%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC---------TQIFEGHS 142
+K H + VA P YVLS+S D IK+W+ G+ ++ H
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 143 H-YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD----AHQKGVNCVDYFTGG 197
+ N + + + S D +++ D T++ A + + ++ G
Sbjct: 246 EGSIFATCSNDQTIRVWLTNSKDCKVEL-----RDHEHTVECIAWAPEAAASAINEAAGA 300
Query: 198 DK-------PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
D P+L +GS D T ++WD C+ TL GH + V + FHP +++ S+D
Sbjct: 301 DNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDD 360
Query: 251 GTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
T+R+W R TL +I + K+ ++ G + T+ V
Sbjct: 361 KTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 47 (21.6 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 437 GTLLAMCSNDF---ICFYDWAECRL-IRRIDVTVKNLYWADSGDLVAI 480
G++ A CSND + + +C++ +R + TV+ + WA AI
Sbjct: 247 GSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAI 294
Score = 37 (18.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 344 LAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377
L + L D + + L +P G+++V D + I
Sbjct: 330 LCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTI 363
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 239 (89.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 66/257 (25%), Positives = 114/257 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
++SV P ++ + +W+ ++T+ F E + S F +++ +G+
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ V D + VA+ P YV + S D +++WD G++ ++
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 138 F--EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+GH V V F P S SLD+TIK+W L P + ++ KG C F
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKE-LVSGSLDKTIKLWELNLPRQQY--NSAGKGGKCHRTFE 494
Query: 196 GG-----------DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
G D ++++GS D + WD T + L+GH ++V +V P +
Sbjct: 495 GHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLF 554
Query: 245 ITGSEDGTVRIWHATTY 261
TGS D RIW + Y
Sbjct: 555 ATGSGDMRARIWRYSAY 571
Score = 195 (73.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 66/232 (28%), Positives = 109/232 (46%)
Query: 45 QSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
Q +++ KS +L +RS F +++ GA+D IRV++ T +F H I
Sbjct: 307 QDESVDKS---GDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYS 363
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWEKGWMC--TQIFEGHSHYVMQVTFNPKDTNTFASAS 162
+ Y+ S S D ++LWD +G + I +G V V +P D A+ S
Sbjct: 364 LDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG----VTTVAMSP-DGLYVAAGS 418
Query: 163 LDRTIKIWNLGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD---- 215
LD+T+++W+ + L D H+ V V + G + L++GS D T K+W+
Sbjct: 419 LDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKE--LVSGSLDKTIKLWELNLP 476
Query: 216 ---YQTKS----CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Y + C +T EGH V +VC P+ +++GS+D V+ W T
Sbjct: 477 RQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPIT 528
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 240 (89.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVC---IWNYQSQTMAKSFEVTELPVRSAKF 65
+++ + V S+ L + +LA+ G C +W+ S PV S +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
++ +VAG+ IRV++ ++ H I + HP +V S S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 126 WDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD KG C + GHS V + F+P D ASA+ D T+K+W+L + H
Sbjct: 132 WDIRRKG--CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 185 QKGVNCVDYFTGGDKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
VN V++ YL+ +GS D T + WD + V +EG V +V F+P+
Sbjct: 189 TGPVNVVEFHPN---EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 244 IITGSEDGTVRIW 256
+ +G +D ++R++
Sbjct: 246 LYSGCQD-SLRVY 257
Score = 235 (87.8 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ GHT V+ V FHP ++ +GS D T+R W +++
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 203 (76.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/228 (25%), Positives = 111/228 (48%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+SV L+ E I+A SG++ +W+ ++ + ++ + + S F +
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +G+ D I++++ V + H+ +RC+ P ++ S++DD +KLWD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G M ++ F GH+ V V F+P + AS S DRTI+ W+L ++ V
Sbjct: 179 GKMMSE-FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS--AVC 236
V + D L +G D + +V+ ++ + C + + V+ A+C
Sbjct: 237 VLF--NPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVNWGKVADLAIC 281
Score = 155 (59.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + + VR +F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS-SDDMLIK 124
+W+ + ADD +++++ + F HT + V HP Y+L+S S D I+
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIR 214
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
WD EK + EG V V FNP
Sbjct: 215 FWDLEK-FQVVSCIEGEPGPVRSVLFNP 241
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 240 (89.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVC---IWNYQSQTMAKSFEVTELPVRSAKF 65
+++ + V S+ L + +LA+ G C +W+ S PV S +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
++ +VAG+ IRV++ ++ H I + HP +V S S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 126 WDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD KG C + GHS V + F+P D ASA+ D T+K+W+L + H
Sbjct: 132 WDIRRKG--CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 185 QKGVNCVDYFTGGDKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
VN V++ YL+ +GS D T + WD + V +EG V +V F+P+
Sbjct: 189 TGPVNVVEFHPN---EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 244 IITGSEDGTVRIW 256
+ +G +D ++R++
Sbjct: 246 LYSGCQD-SLRVY 257
Score = 235 (87.8 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ GHT V+ V FHP ++ +GS D T+R W +++
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 203 (76.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/228 (25%), Positives = 111/228 (48%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+SV L+ E I+A SG++ +W+ ++ + ++ + + S F +
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +G+ D I++++ V + H+ +RC+ P ++ S++DD +KLWD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G M ++ F GH+ V V F+P + AS S DRTI+ W+L ++ V
Sbjct: 179 GKMMSE-FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS--AVC 236
V + D L +G D + +V+ ++ + C + + V+ A+C
Sbjct: 237 VLF--NPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVNWGKVADLAIC 281
Score = 155 (59.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + + VR +F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS-SDDMLIK 124
+W+ + ADD +++++ + F HT + V HP Y+L+S S D I+
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIR 214
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
WD EK + EG V V FNP
Sbjct: 215 FWDLEK-FQVVSCIEGEPGPVRSVLFNP 241
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 240 (89.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVC---IWNYQSQTMAKSFEVTELPVRSAKF 65
+++ + V S+ L + +LA+ G C +W+ S PV S +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
++ +VAG+ IRV++ ++ H I + HP +V S S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 126 WDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD KG C + GHS V + F+P D ASA+ D T+K+W+L + H
Sbjct: 132 WDIRRKG--CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 185 QKGVNCVDYFTGGDKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
VN V++ YL+ +GS D T + WD + V +EG V +V F+P+
Sbjct: 189 TGPVNVVEFHPN---EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 244 IITGSEDGTVRIW 256
+ +G +D ++R++
Sbjct: 246 LYSGCQD-SLRVY 257
Score = 235 (87.8 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ GHT V+ V FHP ++ +GS D T+R W +++
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 202 (76.2 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 55/211 (26%), Positives = 104/211 (49%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+SV L+ E I+A SG++ +W+ ++ + ++ + + S F +
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +G+ D I++++ V + H+ +RC+ P ++ S++DD +KLWD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G M ++ F GH+ V V F+P + AS S DRTI+ W+L ++ V
Sbjct: 179 GKMMSE-FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
V + D L +G D + +V+ ++ + C
Sbjct: 237 VLF--NPDGCCLYSGCQD-SLRVYGWEPERC 264
Score = 155 (59.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + + VR +F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS-SDDMLIK 124
+W+ + ADD +++++ + F HT + V HP Y+L+S S D I+
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIR 214
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
WD EK + EG V V FNP
Sbjct: 215 FWDLEK-FQVVSCIEGEPGPVRSVLFNP 241
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 240 (89.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVC---IWNYQSQTMAKSFEVTELPVRSAKF 65
+++ + V S+ L + +LA+ G C +W+ S PV S +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
++ +VAG+ IRV++ ++ H I + HP +V S S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 126 WDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD KG C + GHS V + F+P D ASA+ D T+K+W+L + H
Sbjct: 132 WDIRRKG--CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 185 QKGVNCVDYFTGGDKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
VN V++ YL+ +GS D T + WD + V +EG V +V F+P+
Sbjct: 189 TGPVNVVEFHPN---EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCC 245
Query: 244 IITGSEDGTVRIW 256
+ +G +D ++R++
Sbjct: 246 LYSGCQD-SLRVY 257
Score = 235 (87.8 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ GHT V+ V FHP ++ +GS D T+R W +++
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 203 (76.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/228 (25%), Positives = 111/228 (48%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+SV L+ E I+A SG++ +W+ ++ + ++ + + S F +
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +G+ D I++++ V + H+ +RC+ P ++ S++DD +KLWD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G M ++ F GH+ V V F+P + AS S DRTI+ W+L ++ V
Sbjct: 179 GKMMSE-FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS--AVC 236
V + D L +G D + +V+ ++ + C + + V+ A+C
Sbjct: 237 VLF--NPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVNWGKVADLAIC 281
Score = 155 (59.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/148 (25%), Positives = 65/148 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + + VR +F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS-SDDMLIK 124
+W+ + ADD +++++ + F HT + V HP Y+L+S S D I+
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIR 214
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
WD EK + EG V V FNP
Sbjct: 215 FWDLEK-FQVVSCIEGEPGPVRSVLFNP 241
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 222 (83.2 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 70/269 (26%), Positives = 120/269 (44%)
Query: 72 VVAGADDMFIRVYNYNT--MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
VV G+ D ++V+ + +D E H + V + TLP SSS D I+LWD E
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
G I G + F+P D+ A+ + + I+ + S ++LD K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
+ Y G YL +G+ D ++D T + TLEGH + ++ F P+ +++T S+
Sbjct: 153 SIAYSPDGK--YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 250 DGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASM 308
DG ++I+ L TL+ V + + V + ++ V +G V +
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Query: 309 DNSGKIIWA-KHNEIQTVNIKSVGADYEV 336
+ +W K+N + I SVG D E+
Sbjct: 271 FDHQDQVWGVKYNGNGS-KIVSVGDDQEI 298
Score = 208 (78.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
RL+++ L V SVD+ + P +S + +W+ ++ KS + + +
Sbjct: 53 RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 112
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F Q++ G + ++ + K + +I +A P Y+ S + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + + EGH+ + +TF+P D+ +AS D IKI+++ + TL
Sbjct: 173 NIFDIATGKLLHTL-EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + D + ++ S D + KVWD T++CV T H V V ++
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK 288
Query: 244 IITGSEDGTVRIW 256
I++ +D + I+
Sbjct: 289 IVSVGDDQEIHIY 301
Score = 190 (71.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 61/270 (22%), Positives = 119/270 (44%)
Query: 26 SEPWILASLYSGTVCIWNYQSQTMAK--SFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
SE + SL V +W ++ + + S E +L V S + + D IR+
Sbjct: 32 SETVVTGSL-DDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ ++K +A +A P Y+ + + + ++ E G + +
Sbjct: 91 WDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGK 149
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
+++ + ++P D AS ++D I I+++ + TL+ H + + + D L+
Sbjct: 150 FILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLV 206
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
T SDD K++D Q + TL GH V V F P+ ++ S D +V++W T
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 264 ENTLNYGLERVWAIGYMKSSRRIV-IGYDE 292
+T ++VW + Y + +IV +G D+
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 73/300 (24%), Positives = 129/300 (43%)
Query: 96 EAHTDYIRCVA----VHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ-IFEGHSHYVMQVTF 150
+AH D I VA V++ S D L+K+W W + Q EGH V+ V
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDI 72
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ AS+SLD I++W+L + ++DA V+ D YL TG+
Sbjct: 73 S-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSPDSQYLATGTHVGK 129
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++ ++ +L+ + ++ + P+ + +G+ DG + I+ T +L +TL
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSV 330
+ ++ + S+ +V D+G I + + +A SG W +N+
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWV-------LNVAFC 241
Query: 331 GAD-YEVTDGERLPLAVKELGT--C-----DLYPQ--SLKHNPNGRFVVVCGDGEYI-IY 379
D + V+ + V ++GT C D Q +K+N NG +V GD + I IY
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 144 (55.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L R + + S+ P ++ + G + I++ + + + E +P+RS F Q
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD +I++Y+ + H ++ VA P + +SSS D +K+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
C F H V V +N + S D+ I I++
Sbjct: 264 R-TCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHIYD 302
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 222 (83.2 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 70/269 (26%), Positives = 120/269 (44%)
Query: 72 VVAGADDMFIRVYNYNT--MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
VV G+ D ++V+ + +D E H + V + TLP SSS D I+LWD E
Sbjct: 35 VVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
G I G + F+P D+ A+ + + I+ + S ++LD K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
+ Y G YL +G+ D ++D T + TLEGH + ++ F P+ +++T S+
Sbjct: 153 SIAYSPDGK--YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 250 DGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASM 308
DG ++I+ L TL+ V + + V + ++ V +G V +
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Query: 309 DNSGKIIWA-KHNEIQTVNIKSVGADYEV 336
+ +W K+N + I SVG D E+
Sbjct: 271 FDHQDQVWGVKYNGNGS-KIVSVGDDQEI 298
Score = 205 (77.2 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 59/253 (23%), Positives = 114/253 (45%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
+L+++ L V SVD+ + P +S + +W+ ++ KS + + +
Sbjct: 53 KLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 112
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F Q++ G + ++ + K + +I +A P Y+ S + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + + EGH+ + +TF+P D+ +AS D IKI+++ + TL
Sbjct: 173 NIFDIATGKLLHTL-EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + D + ++ S D + KVWD T++CV T H V V ++
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK 288
Query: 244 IITGSEDGTVRIW 256
I++ +D + I+
Sbjct: 289 IVSVGDDQEIHIY 301
Score = 190 (71.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 61/270 (22%), Positives = 119/270 (44%)
Query: 26 SEPWILASLYSGTVCIWNYQSQTMAK--SFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
SE + SL V +W ++ + + S E +L V S + + D IR+
Sbjct: 32 SETVVTGSL-DDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ ++K +A +A P Y+ + + + ++ E G + +
Sbjct: 91 WDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGK 149
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
+++ + ++P D AS ++D I I+++ + TL+ H + + + D L+
Sbjct: 150 FILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLV 206
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
T SDD K++D Q + TL GH V V F P+ ++ S D +V++W T
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 264 ENTLNYGLERVWAIGYMKSSRRIV-IGYDE 292
+T ++VW + Y + +IV +G D+
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 73/300 (24%), Positives = 129/300 (43%)
Query: 96 EAHTDYIRCVA----VHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ-IFEGHSHYVMQVTF 150
+AH D I VA V++ S D L+K+W W + Q EGH V+ V
Sbjct: 13 QAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDI 72
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ AS+SLD I++W+L + ++DA V+ D YL TG+
Sbjct: 73 S-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSPDSQYLATGTHVGK 129
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++ ++ +L+ + ++ + P+ + +G+ DG + I+ T +L +TL
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSV 330
+ ++ + S+ +V D+G I + + +A SG W +N+
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWV-------LNVAFC 241
Query: 331 GAD-YEVTDGERLPLAVKELGT--C-----DLYPQ--SLKHNPNGRFVVVCGDGEYI-IY 379
D + V+ + V ++GT C D Q +K+N NG +V GD + I IY
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 144 (55.7 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L R + + S+ P ++ + G + I++ + + + E +P+RS F Q
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD +I++Y+ + H ++ VA P + +SSS D +K+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
C F H V V +N + S D+ I I++
Sbjct: 264 R-TCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHIYD 302
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 237 (88.5 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 66/246 (26%), Positives = 122/246 (49%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 200 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--I 257
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ N + + H + + + + + +++ S D I +WD
Sbjct: 258 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 315
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 316 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 372
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 373 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 426
Query: 251 GTVRIW 256
G +++W
Sbjct: 427 GKIKVW 432
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 217 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 272
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 273 AGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 329 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 384
Query: 291 DEGTI 295
+ TI
Sbjct: 385 SDNTI 389
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 205 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 258
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W + NTL + E V
Sbjct: 259 TGSSDSTVRVWDVNAGEMLNTLIHHCEAV 287
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 46/156 (29%), Positives = 74/156 (47%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 338 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 395
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 396 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 451
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
L H V + + D+ +++ S D T +WD+
Sbjct: 452 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDF 483
Score = 132 (51.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 234 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLR 291
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 292 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 347
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 348 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 403
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 404 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRV 459
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 460 FRLQFD-EFQIV-SSSHDDTILIW 481
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 239 (89.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 70/253 (27%), Positives = 117/253 (46%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVC---IWNYQSQTMAKSFEVTELPVRSAKF 65
+++ + V S+ L + +LA+ G C +W+ S PV S +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
++ +VAG+ IRV++ ++ H I + HP +V S S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 126 WDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD KG C + GHS V + F+P D ASA+ D T+K+W+L + H
Sbjct: 132 WDIRRKG--CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 185 QKGVNCVDYFTGGDKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
VN V++ YL+ +GS D T + WD + V +EG V ++ F+P+
Sbjct: 189 TGPVNVVEFHPN---EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCC 245
Query: 244 IITGSEDGTVRIW 256
+ +G +D ++R++
Sbjct: 246 LYSGCQD-SLRVY 257
Score = 235 (87.8 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ GHT V+ V FHP ++ +GS D T+R W +++
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 209 (78.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 58/228 (25%), Positives = 111/228 (48%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+SV L+ E I+A SG++ +W+ ++ + ++ + + S F +
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +G+ D I++++ V + H+ +RC+ P ++ S++DD +KLWD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G M ++ F GH+ V V F+P + AS S DRTI+ W+L ++ V
Sbjct: 179 GKMMSE-FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS--AVC 236
+ + D L +G D + +V+ ++ + C + H V+ A+C
Sbjct: 237 ILF--NPDGCCLYSGCQD-SLRVYGWEPERCFDVVLVHWGKVADLAIC 281
Score = 154 (59.3 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + + VR +F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS-SDDMLIK 124
+W+ + ADD +++++ + F HT + V HP Y+L+S S D I+
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIR 214
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
WD EK + EG V + FNP
Sbjct: 215 FWDLEK-FQVVSCIEGEPGPVRSILFNP 241
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 229 (85.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 70/294 (23%), Positives = 123/294 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPS-EPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H S + +L S G + +W+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + VKV AHT Y+ C +++S
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS-IVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T +F GH+ M + +P D F S + D T K+W++
Sbjct: 161 SGDTTCALWDIETGQQKT-VFLGHTGDCMSLAVSP-DFKLFISGACDATAKLWDVREGTC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS--CVQTLEGHTHNVSAV 235
T H+ +N + +F G+ + TGSDD T +++D + V + E +++V
Sbjct: 219 RQTFSGHESDINAICFFPNGEA--ICTGSDDATCRLFDLRADQELIVYSHESIICGITSV 276
Query: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
F +++ G +D IW + L+ RV +G + G
Sbjct: 277 AFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATG 330
Score = 207 (77.9 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 61/269 (22%), Positives = 121/269 (44%)
Query: 31 LASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMD 90
LA + SG + Q +T ++ + + + + +V+ + D + V++ T +
Sbjct: 30 LAQIVSGVEVVGRIQMRTR-RTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTN 88
Query: 91 KVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW---EKGWMCTQIFEGHSHYVMQ 147
KV + ++ A P+ +V D + +++ E ++ H+ Y+
Sbjct: 89 KVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSC 148
Query: 148 VTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSD 207
F D N+ ++S D T +W++ + H G +C+ D I+G+
Sbjct: 149 CRF--LDDNSIVTSSGDTTCALWDIETGQQKTVFLGHT-G-DCMSLAVSPDFKLFISGAC 204
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
D TAK+WD + +C QT GH +++A+CF P I TGS+D T R++ + +
Sbjct: 205 DATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLFDLRAD--QELI 262
Query: 268 NYGLERV----WAIGYMKSSRRIVIGYDE 292
Y E + ++ + +S R ++ GYD+
Sbjct: 263 VYSHESIICGITSVAFSRSGRLLLAGYDD 291
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 51/189 (26%), Positives = 83/189 (43%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V + D +++ T + VF HT +AV P +S + D KLWD +G
Sbjct: 157 IVTSSGDTTCALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREG 216
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK---GV 188
C Q F GH + + F P + S D T ++++L + D + +H+ G+
Sbjct: 217 -TCRQTFSGHESDINAICFFPNG-EAICTGSDDATCRLFDLRA-DQELIVYSHESIICGI 273
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
V + G L+ G DD +WD V L GH + VS + + + TGS
Sbjct: 274 TSVAFSRSGR--LLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATGS 331
Query: 249 EDGTVRIWH 257
D ++IW+
Sbjct: 332 WDSFLKIWN 340
Score = 145 (56.1 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 46/185 (24%), Positives = 77/185 (41%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S+S D + +WD I S +VM + P N A LD I+NL
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAI-PLRSSWVMTCAYAPSG-NFVACGGLDNMCSIYNLK 127
Query: 174 SPDPNFT----LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
+ + N L AH ++C + D ++T S D T +WD +T GHT
Sbjct: 128 TREGNVKVSRELSAHTGYLSCCRFL---DDNSIVTSSGDTTCALWDIETGQQKTVFLGHT 184
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ ++ P+ + I+G+ D T ++W T + + AI + + I G
Sbjct: 185 GDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTG 244
Query: 290 YDEGT 294
D+ T
Sbjct: 245 SDDAT 249
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 240 (89.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 61/264 (23%), Positives = 124/264 (46%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P ++ +G +WN + + + +R+ K+ + +QW+++
Sbjct: 136 VYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQ 195
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDY-IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
+++ + N M+ +F AH D IR +A PT ++SDD ++WD+ + + +
Sbjct: 196 GGYVKYWQPN-MNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFAR-YTEER 253
Query: 137 IFEGHSHYVMQVTFNP-KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ GH V + ++P K S + +KIW+ S TL H+ V V++
Sbjct: 254 VLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNK 313
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVR 254
G+ +L+TG DH K++D + ++T H V ++ +HP + ++G DG++
Sbjct: 314 NGN--WLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIV 371
Query: 255 IWHATTYRLENTLNYGLER-VWAI 277
W + L + ++ +W++
Sbjct: 372 YWMVDGEKEIGLLEHAHDQAIWSM 395
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 66/281 (23%), Positives = 120/281 (42%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEV-TELPVRSAKFVARK 69
L ++++ +E W+L++ G V W + A F + +R F
Sbjct: 171 LQAHDSAIRALKWASNEQWLLSADQGGYVKYWQ-PNMNNAHMFSAHKDEAIRGLAFAPTD 229
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWD 127
+DD RV+++ + +V H +RC+ HPT + + S D +K+WD
Sbjct: 230 VKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWD 289
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G C + H VM V FN K+ N + D +K++++ T AH+K
Sbjct: 290 PKSG-SCLATLQEHKSSVMAVEFN-KNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKE 347
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN--VSAVCFHPELPIII 245
V + + + + ++G D + W + + LE H H+ + ++ +HP I+
Sbjct: 348 VISLAWHPIHEGLF-VSGGGDGSIVYWMVDGEKEIGLLE-HAHDQAIWSMKWHPLGHILA 405
Query: 246 TGSEDGTVRIWHATTYRLENTLN--YGLERVWAIGYMKSSR 284
TGS D + W R +T+ +GL IG++ R
Sbjct: 406 TGSNDNNTKFWARN--RPGDTVEDIFGLSNTNMIGHLDKER 444
Score = 187 (70.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 59/265 (22%), Positives = 116/265 (43%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S + + ++ G ++N + + +AH IR + ++LS+
Sbjct: 135 PVYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSAD 194
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQ-VTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
+K W + +F H ++ + F P D FA+AS D T ++W+
Sbjct: 195 QGGYVKYW--QPNMNNAHMFSAHKDEAIRGLAFAPTDVK-FATASDDGTARVWDFARYTE 251
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAV 235
L H V C+D+ K + TGS D K+WD ++ SC+ TL+ H +V AV
Sbjct: 252 ERVLRGHGAEVRCIDWHP--TKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAV 309
Query: 236 CFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI-GYDEGT 294
F+ ++TG D V+++ + T + V ++ + + + G +G+
Sbjct: 310 EFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGS 369
Query: 295 IMV-KIGREEPVASMDNS-GKIIWA 317
I+ + E+ + ++++ + IW+
Sbjct: 370 IVYWMVDGEKEIGLLEHAHDQAIWS 394
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 233 (87.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 59/250 (23%), Positives = 111/250 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
++ V HP +LA ++ +WN + F L V F + + G+D
Sbjct: 158 IEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSD 217
Query: 78 DMFIRVYNYNTMDKVKVFEAH---TDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
D + V+N T + + + + H T+ + C+ ++ +S S D + + + G +
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVV 277
Query: 135 TQIFEGHSHYVMQVTFNPKDTNT--FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVD 192
+ + H+ V V F+P A+ +D+ + IW+L P F + H++GV +
Sbjct: 278 SSL-NSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE-HEEGVTSLT 335
Query: 193 YFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGT 252
+ G YL TG + T +WD +CV T GH V A+ I++ S D T
Sbjct: 336 WI--GTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNT 393
Query: 253 VRIWHATTYR 262
R++ ++ ++
Sbjct: 394 ARVFESSEFQ 403
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/223 (24%), Positives = 96/223 (43%)
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM- 133
G DD ++ D H D + C+A + S D +++++D G +
Sbjct: 90 GGDDKAF-LWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLK 148
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
C + +G + V ++P+ A + D ++ +WN H V C D
Sbjct: 149 C--VLDGPGAGIEWVRWHPRGHIVLAGSE-DCSLWMWNADKEAYLNMFSGHNLNVTCGD- 204
Query: 194 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT-HNVSAVCF--HPELPIIITGSED 250
FT K + TGSDD + VW+ +T + ++GH H C + + I+GS+D
Sbjct: 205 FTPDGK-LICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKD 263
Query: 251 GTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEG 293
G+V I + T ++ ++LN + V + + SS I + G
Sbjct: 264 GSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGG 306
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 58/254 (22%), Positives = 111/254 (43%)
Query: 37 GTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFE 96
G V I++ S T+ + + ++ R V+AG++D + ++N + + +F
Sbjct: 135 GVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFS 194
Query: 97 AHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN 156
H + C P + + SDD + +W+ K I +GH ++ +T ++N
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWN-PKTCESIHIVKGHPYHTEGLTCLDINSN 253
Query: 157 TFA--SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF-TGGDKPYLITGSDDHTAKV 213
+ S S D ++ I N+ + +L++H V CV + + P TG D +
Sbjct: 254 SSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLII 313
Query: 214 WDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER 273
WD Q S + + H V+++ + + TG +GTV IW + +T + +
Sbjct: 314 WDLQ-HSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDA 372
Query: 274 VWAIGYMKSSRRIV 287
V AI ++ IV
Sbjct: 373 VQAISVSTNTDFIV 386
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 57/238 (23%), Positives = 107/238 (44%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Q + +G D +++++ ++ V + I V HP VL+ S+D + +W+ +
Sbjct: 126 QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNAD 185
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ---K 186
K +F GH+ V F P D + S D ++ +WN + + + H +
Sbjct: 186 KE-AYLNMFSGHNLNVTCGDFTP-DGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTE 243
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE---LPI 243
G+ C+D + I+GS D + + + T V +L HT +V V F P +P+
Sbjct: 244 GLTCLDI--NSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPL 301
Query: 244 IITGSEDGTVRIW---HATT-YRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
TG D + IW H+T + E+ E V ++ ++ +S+ + G GT+ +
Sbjct: 302 AATGGMDKKLIIWDLQHSTPRFICEHE-----EGVTSLTWIGTSKYLATGCANGTVSI 354
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 47/209 (22%), Positives = 90/209 (43%)
Query: 90 DKVKVFEAHTDYIRCVAV-HPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
D+ ++F +D +R + V LP + DDM +++ F GH + +
Sbjct: 19 DEGEIFLGESDVLREIDVDEEDLPE--ADDDDMDDDGEQFDENDDSVHTFTGHKGELYAL 76
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
+P D A+ D +W +G+ D L H+ V+C+ + G L +G D
Sbjct: 77 ACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ--LLASGGLD 134
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
+++D + + L+G + V +HP I++ GSED ++ +W+A N +
Sbjct: 135 GVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFS 194
Query: 269 YGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
V + + I G D+ +++V
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIV 223
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 237 (88.5 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 67/252 (26%), Positives = 126/252 (50%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
++SV P ++ TV +W+ ++ + +F EL + S + + +++V+G+
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 78 DMFIRVYNYN------TMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
D ++++ T+ +V + + VA+ P V + S D +++LWD + G
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEV--GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG 447
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPN---FTLDAHQKG 187
+ + +EGH V V F+P D + AS SLD+++K+W+L GS + T + H+
Sbjct: 448 YFLER-YEGHLDSVYSVAFSP-DGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP---II 244
V V + G +LI+GS D + + WD + + L+GH ++V +V P+ +
Sbjct: 506 VLSVAFSPDGS--WLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVF 563
Query: 245 ITGSEDGTVRIW 256
TGS D R+W
Sbjct: 564 ATGSGDFRSRLW 575
Score = 196 (74.1 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 44/151 (29%), Positives = 79/151 (52%)
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
Y+ V F+P D N A+ + D+T+K+W++ + T H+ + +DY + G +++
Sbjct: 329 YIRSVCFSP-DGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGR--FIV 385
Query: 204 TGSDDHTAKVWDYQTKSCVQTLE----GHTHNVSAVCFHPELPIIITGSEDGTVRIWHAT 259
+GS D AK+WD + C TL G + V++V P+ ++ GS D VR+W A
Sbjct: 386 SGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQ 445
Query: 260 T-YRLENTLNYGLERVWAIGYMKSSRRIVIG 289
T Y LE + L+ V+++ + + + G
Sbjct: 446 TGYFLERYEGH-LDSVYSVAFSPDGKSLASG 475
Score = 190 (71.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 59/217 (27%), Positives = 101/217 (46%)
Query: 57 ELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLS 116
+L +RS F ++ GA+D ++V++ +T F H I + +++S
Sbjct: 327 DLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVS 386
Query: 117 SSDDMLIKLWDWEKGWMCTQIFE---GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
S D K+WD EKG + G + V V +P D A+ SLD +++W+
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP-DGRLVAAGSLDNIVRLWDAQ 445
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY---QTKS-CVQTLEGHT 229
+ + H V V + G L +GS D + K+WD +++S C T GH
Sbjct: 446 TGYFLERYEGHLDSVYSVAFSPDGKS--LASGSLDKSLKLWDLSGSRSRSRCRATFNGHK 503
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIW---HATTYRL 263
V +V F P+ +I+GS+D +V+ W + TT+ +
Sbjct: 504 DFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMM 540
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 52/182 (28%), Positives = 87/182 (47%)
Query: 82 RVYNYNTMDKVKVF--EAHTD---YIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
++Y+ +T KV F E+ D YIR V P Y+ + ++D +K+WD +
Sbjct: 305 QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKI-QH 363
Query: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV-NCVDYFT 195
F GH + + ++ D S S D+ KIW++ FTL + G N V
Sbjct: 364 TFYGHELDIYSLDYS-SDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVA 422
Query: 196 -GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
D + GS D+ ++WD QT ++ EGH +V +V F P+ + +GS D +++
Sbjct: 423 MSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLK 482
Query: 255 IW 256
+W
Sbjct: 483 LW 484
Score = 168 (64.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTEL-PVRSAKFVARK---QWVV 73
+ S+D +I++ IW+ + A + E+ P VA + V
Sbjct: 372 IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVA 431
Query: 74 AGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWM 133
AG+ D +R+++ T ++ +E H D + VA P + S S D +KLWD
Sbjct: 432 AGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRS 491
Query: 134 ---CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
C F GH +V+ V F+P D + S S DR+++ W+ + + L H+ V
Sbjct: 492 RSRCRATFNGHKDFVLSVAFSP-DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVIS 550
Query: 191 VDYFTGGDKPYLI-TGSDDHTAKVWDYQT 218
V + + TGS D +++W Y +
Sbjct: 551 VALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 131 (51.2 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN-----VSAVCFH 238
H V CV++ D YL TG + +A+++D T V + + +VCF
Sbjct: 280 HNSVVCCVNF--SNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFS 336
Query: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVIG 289
P+ + TG+ED TV++W T ++++T YG E ++++ Y R IV G
Sbjct: 337 PDGNYLATGAEDKTVKVWDIHTKKIQHTF-YGHELDIYSLDYSSDGRFIVSG 387
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 238 (88.8 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 70/297 (23%), Positives = 128/297 (43%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A S V+ L + K R + G DD + V++ N + V
Sbjct: 7 TKTAWKLQ-EIVAHSSNVSSLVL--GKSTGRL--LATGGDDCRVNVWSVNKPNCVMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT I + + +++ S I++WD E + + GH + + F+P +
Sbjct: 62 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLL-GHKANICSLDFHPYGSFV 120
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS SLD IK+W++ F +H + V C+ + G +L + +DDHT K+WD
Sbjct: 121 -ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
+ GH+ V+ V FHP ++ +GS D T+R W + + + + V I
Sbjct: 178 AGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCI 237
Query: 278 GYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
+ + G+ + +++ EP D + W K ++ + + +G +
Sbjct: 238 LFNPDGCCLYGGFQDS---LRVYGWEPERCFDVV-VVNWGKVADLSVCHNQLIGVSF 290
Score = 198 (74.8 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 55/226 (24%), Positives = 110/226 (48%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
++S+ + E I+A SG++ +W+ ++ + ++ + + S F +V +G+
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I++++ + +++HT +RC+ P ++ S++DD +KLWD G + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GHS V V F+P + AS S DRTI+ W+L ++ V C+ + G
Sbjct: 185 FTGHSGPVNVVEFHPSEY-LLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS--AVCFHPEL 241
Y G + +V+ ++ + C + + V+ +VC H +L
Sbjct: 244 CCLY---GGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVC-HNQL 285
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + ++ VR +F
Sbjct: 96 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKV-FEAHTDYIRCVAVHPTLPYVLSS-SDDMLI 123
+W+ + ADD +++++ T KV F H+ + V HP+ Y+L+S S D I
Sbjct: 156 SPDGKWLASAADDHTVKLWDL-TAGKVMFEFTGHSGPVNVVEFHPS-EYLLASGSSDRTI 213
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+ WD EK + + I E + V + FNP
Sbjct: 214 RFWDLEKFHVVSCI-EEEATPVRCILFNP 241
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 238 (88.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 59/194 (30%), Positives = 93/194 (47%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
W Y + K+F+ V +F + G+ D I++++ T ++++ H
Sbjct: 335 WKY-GRCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESG 391
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
IRC+ T ++S S D IK+W+W G C + GH V+ + F D + AS
Sbjct: 392 IRCLQFDDTK--LISGSMDRTIKVWNWRTG-ECISTYTGHRGGVIGLHF---DASILASG 445
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
S+D+T+KIWN F+L H VN V T + + SDD T ++WD TK+C
Sbjct: 446 SVDKTVKIWNFEDKS-TFSLRGHTDWVNAVRVDTSSRTVF--SASDDCTVRLWDLDTKTC 502
Query: 222 VQTLEGHTHNVSAV 235
++T GH V V
Sbjct: 503 IRTFHGHVGQVQQV 516
Score = 223 (83.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 55/171 (32%), Positives = 90/171 (52%)
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+W+ G + F+GH++ VM + F + N A+ S D TIKIW+ + + TL H+
Sbjct: 334 NWKYGRCSIKTFKGHTNGVMCLQF---EDNILATGSYDTTIKIWDTETGEELRTLRGHES 390
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
G+ C+ + D LI+GS D T KVW+++T C+ T GH V + H + I+ +
Sbjct: 391 GIRCLQF----DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGV--IGLHFDASILAS 444
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVW--AIGYMKSSRRIVIGYDEGTI 295
GS D TV+IW+ + ++T + W A+ SSR + D+ T+
Sbjct: 445 GSVDKTVKIWN---FEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTV 492
Score = 192 (72.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 62/253 (24%), Positives = 109/253 (43%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ +WN+++ ++ V F A + +G+ D ++++N+ +
Sbjct: 410 TIKVWNWRTGECISTYTGHRGGVIGLHFDA--SILASGSVDKTVKIWNFEDKSTFSL-RG 466
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HTD++ V V + V S+SDD ++LWD + C + F GH V QV P++
Sbjct: 467 HTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTK-TCIRTFHGHVGQVQQVVPLPREFEF 525
Query: 158 FA-SASLDRTIKIWNLGSPDP-----NFTLDAH----QKGVNCVDYFTGGDKP--YLITG 205
A + G DP + L+ + Q + G P Y++T
Sbjct: 526 EEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTS 585
Query: 206 SDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN 265
+ D T ++W+ T C++T GH V A+ + I++G+ED ++IW T + E
Sbjct: 586 ALDSTIRLWETTTGRCLRTFFGHLEGVWAL--GADTLRIVSGAEDRMIKIWDPRTGKCER 643
Query: 266 TLNYGLERVWAIG 278
T V IG
Sbjct: 644 TFTGHSGPVTCIG 656
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 75/288 (26%), Positives = 127/288 (44%)
Query: 30 ILAS-LYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
ILA+ Y T+ IW+ ++ ++ E +R +F K +++G+ D I+V+N+ T
Sbjct: 361 ILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNWRT 418
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
+ + + H + + +H + S S D +K+W++E T GH+ +V V
Sbjct: 419 GECISTYTGHRGGV--IGLHFDASILASGSVDKTVKIWNFED--KSTFSLRGHTDWVNAV 474
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV-----DY-FTGGDKPYL 202
+ F SAS D T+++W+L + T H V V ++ F D
Sbjct: 475 RVDTSSRTVF-SASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAE-- 531
Query: 203 ITGSDDHTAKVWDYQTKSCVQTLEGHTHNVS---AVCFHPEL------P--IIITGSEDG 251
+DD + D S +Q G N + + F P ++T + D
Sbjct: 532 -CENDDLSTTSGDADPPS-IQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDS 589
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKI 299
T+R+W TT R T LE VWA+G + RIV G ++ M+KI
Sbjct: 590 TIRLWETTTGRCLRTFFGHLEGVWALG--ADTLRIVSGAEDR--MIKI 633
Score = 151 (58.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 59/250 (23%), Positives = 109/250 (43%)
Query: 21 VDLHPSEPWILAS-LYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDM 79
+ LH + ILAS TV IWN++ ++ T+ V + + + V + +DD
Sbjct: 433 IGLH-FDASILASGSVDKTVKIWNFEDKSTFSLRGHTDW-VNAVRVDTSSRTVFSASDDC 490
Query: 80 FIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT-LPY----VLSSSDDMLIKLWDWEKGWMC 134
+R+++ +T ++ F H ++ V P + +DD+ D + +
Sbjct: 491 TVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQ 550
Query: 135 TQI-FEGHSHYVMQVTFNPKDTNTFAS-------ASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ E ++ Y F N A+ ++LD TI++W + T H +
Sbjct: 551 ASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLE 610
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
GV + G D +++G++D K+WD +T C +T GH+ V+ + T
Sbjct: 611 GV----WALGADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDSR--FAT 664
Query: 247 GSEDGTVRIW 256
GSED VR++
Sbjct: 665 GSEDCEVRMY 674
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 237 (88.5 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 66/246 (26%), Positives = 122/246 (49%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 299 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--I 356
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ N + + H + + + + + +++ S D I +WD
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 414
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 472 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 525
Query: 251 GTVRIW 256
G +++W
Sbjct: 526 GKIKVW 531
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 316 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 371
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 372 AGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 428 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 291 DEGTI 295
+ TI
Sbjct: 484 SDNTI 488
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W + NTL + E V
Sbjct: 358 TGSSDSTVRVWDVNAGEMLNTLIHHCEAV 386
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/156 (29%), Positives = 74/156 (47%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 494
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 495 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 550
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
L H V + + D+ +++ S D T +WD+
Sbjct: 551 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDF 582
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 333 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLR 390
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 391 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 446
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 447 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 503 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRV 558
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 559 FRLQFD-EFQIV-SSSHDDTILIW 580
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 237 (88.5 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 66/246 (26%), Positives = 122/246 (49%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 299 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV--I 356
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ N + + H + + + + + +++ S D I +WD
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 414
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 472 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 525
Query: 251 GTVRIW 256
G +++W
Sbjct: 526 GKIKVW 531
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 316 IVSGLRDNTIKIWD-KSTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 371
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 372 AGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 428 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 291 DEGTI 295
+ TI
Sbjct: 484 SDNTI 488
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W + NTL + E V
Sbjct: 358 TGSSDSTVRVWDVNAGEMLNTLIHHCEAV 386
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/156 (29%), Positives = 74/156 (47%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 494
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 495 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRT 550
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
L H V + + D+ +++ S D T +WD+
Sbjct: 551 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDF 582
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 333 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLR 390
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 391 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 446
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 447 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 503 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRV 558
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 559 FRLQFD-EFQIV-SSSHDDTILIW 580
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 237 (88.5 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 66/246 (26%), Positives = 122/246 (49%)
Query: 14 RSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWV 72
RSE K V L + I++ L T+ IW+ + + V ++ R +
Sbjct: 299 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV--I 356
Query: 73 VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGW 132
+ G+ D +RV++ N + + H + + + + + +++ S D I +WD
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM--MVTCSKDRSIAVWDMASPT 414
Query: 133 MCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
T ++ GH V V F+ K SAS DRTIK+WN + + TL+ H++G+ C
Sbjct: 415 DITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC 471
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I++G+ D
Sbjct: 472 LQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IVSGAYD 525
Query: 251 GTVRIW 256
G +++W
Sbjct: 526 GKIKVW 531
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD + C +I GH+ V+ + + D + S D T+++W++
Sbjct: 316 IVSGLRDNTIKIWD-KNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 371
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 372 AGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W+ +T TLN + + Y R +V G
Sbjct: 428 AVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 483
Query: 291 DEGTI 295
+ TI
Sbjct: 484 SDNTI 488
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++V+ + D I+V+N +T + V+ H I C+ L V+S S D I+LWD E
Sbjct: 437 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIE 494
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNF--------T 180
G C ++ EGH V + F D S + D IK+W+L + DP T
Sbjct: 495 CG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 550
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 223
L H V + + D+ +++ S D T +WD+ Q
Sbjct: 551 LVEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
KGV C+ Y D +++G D+T K+WD T C + L GHT +V +C + +II
Sbjct: 304 KGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVII 357
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERV 274
TGS D TVR+W + NTL + E V
Sbjct: 358 TGSSDSTVRVWDVNAGEMLNTLIHHCEAV 386
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 61/264 (23%), Positives = 107/264 (40%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
LE KR L + V + L E I+ TV +W+ + M + V +
Sbjct: 333 LECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLR 390
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKV---KVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
F +V + D I V++ + + +V H + V Y++S+S D
Sbjct: 391 F--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDR 446
Query: 122 LIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 181
IK+W+ + GH + + + + S S D TI++W++ L
Sbjct: 447 TIKVWNTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECGACLRVL 502
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---------CVQTLEGHTHNV 232
+ H++ V C+ + D +++G+ D KVWD C++TL H+ V
Sbjct: 503 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 558
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
+ F E I+ + S D T+ IW
Sbjct: 559 FRLQFD-EFQIV-SSSHDDTILIW 580
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 226 (84.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 62/202 (30%), Positives = 100/202 (49%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H+ ++ V + + LS S D ++LWD G T+ F GH+ V+ V F+ D
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLATG-ETTRRFVGHTKDVLSVAFST-DNRQ 119
Query: 158 FASASLDRTIKIWN-LGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
SAS DRTIK+WN LG + +T+ D H++ V+CV + P +++ S D T KV
Sbjct: 120 IVSASRDRTIKLWNTLG--ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 214 WDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLE----- 264
W+ Q +L GH+ ++ V P+ + +G +DG + +W Y LE
Sbjct: 178 WNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSII 237
Query: 265 NTLNYGLERVWAIGYMKSSRRI 286
++L + R W ++S RI
Sbjct: 238 HSLCFSPNRYWLCAATENSIRI 259
Score = 191 (72.3 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 53/183 (28%), Positives = 87/183 (47%)
Query: 94 VFEAHTDYIRCVAVH-PTLPYVLSSSDDMLIKLWDW---EKGWMCTQI-FEGHSHYVMQV 148
+ AHTD + +A ++++S D I LW +K + Q GHSH+V V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
+ D S S D +++W+L + + H K V V + T D +++ S D
Sbjct: 70 VLS-SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST--DNRQIVSASRD 126
Query: 209 HTAKVWDY--QTKSCVQTLEGHTHNVSAVCFHPE--LPIIITGSEDGTVRIWHATTYRLE 264
T K+W+ + K + +GH VS V F P +P I++ S D TV++W+ +L
Sbjct: 127 RTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 265 NTL 267
N+L
Sbjct: 187 NSL 189
Score = 184 (69.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 65/279 (23%), Positives = 125/279 (44%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+R+L S V+ V L + L+ + G + +W+ + + F V S F
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEA--HTDYIRCVAVHP-TL-PYVLSSSDDMLI 123
+ +V+ + D I+++N K + E H +++ CV P TL P ++S+S D +
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
K+W+ + + + GHS Y+ V +P D + AS D I +W+L ++L+A
Sbjct: 176 KVWNLQNCKLRNSLV-GHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
G + + Y + + +++ ++WD ++KS V+ L+ + +
Sbjct: 234 ---G-SIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEA----EKNEGG 285
Query: 244 IITGSEDGTVRI----WHATTYRLENTLNYGLERVWAIG 278
+ TG++ + W A L + G+ RVW IG
Sbjct: 286 VGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIG 324
Score = 137 (53.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAH 184
+G + I H+ V + +++ +AS D++I +W L D ++ L H
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
V D D + ++GS D ++WD T + GHT +V +V F + I
Sbjct: 63 SHFVE--DVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 245 ITGSEDGTVRIWHATTYRLENTLNYG 270
++ S D T+++W+ T + T++ G
Sbjct: 121 VSASRDRTIKLWN-TLGECKYTISEG 145
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 235 (87.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 67/251 (26%), Positives = 126/251 (50%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ Q+ K V ++
Sbjct: 216 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDE 275
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ N+ + + H + + + L +++ S D I +WD
Sbjct: 276 RV--IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGL--MVTCSKDRSIAVWD 331
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+ ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 332 MASPTDISLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 389 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 442
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 443 SGAYDGKIKVW 453
Score = 170 (64.9 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 49/185 (26%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD ++ C +I GH+ V+ + + D + S D T+++W++
Sbjct: 238 IISGLRDNSIKIWD-KQTLECLKILTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVN 293
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
S + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 294 SGEVLNTLIHHNEAVLHLRFCNG----LMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W +T TLN + + Y R +V G
Sbjct: 350 AVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 405
Query: 291 DEGTI 295
+ TI
Sbjct: 406 SDNTI 410
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD QT C++ L GHT +V +C + +
Sbjct: 224 NSKGVYCLQY----DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQYDERV 277
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERV 274
I+TGS D TVR+W + + NTL + E V
Sbjct: 278 IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAV 308
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 56/203 (27%), Positives = 91/203 (44%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVAR--KQWVVAGADDMFIRVYNYNTMDKVKVF 95
++ +W+ S T V + R+A V +++V+ + D I+V++ +T + V+
Sbjct: 326 SIAVWDMASPTDISLRRVL-VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
H I C+ L V+S S D I+LWD E G C ++ EGH V + F D
Sbjct: 385 NGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF---DN 438
Query: 156 NTFASASLDRTIKIWNLGSP-DPNF--------TLDAHQKGVNCVDYFTGGDKPYLITGS 206
S + D IK+W+L + DP TL H V + + D+ +I+ S
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF----DEFQIISSS 494
Query: 207 DDHTAKVWDYQTKSCVQTLEGHT 229
D T +WD+ S EG +
Sbjct: 495 HDDTILIWDFLNVSTNGQTEGRS 517
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 360 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 415
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 416 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 471
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 472 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 502
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 235 (87.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 67/251 (26%), Positives = 126/251 (50%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ QS K V ++
Sbjct: 216 QRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDE 275
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
R +V G+ D +RV++ ++ + + H + + + L +++ S D I +WD
Sbjct: 276 RV--IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNGL--MVTCSKDRSIAVWD 331
Query: 128 WEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+ ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H+
Sbjct: 332 MASATDISLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
+G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I+
Sbjct: 389 RGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 442
Query: 246 TGSEDGTVRIW 256
+G+ DG +++W
Sbjct: 443 SGAYDGKIKVW 453
Score = 171 (65.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 48/185 (25%), Positives = 88/185 (47%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++S D IK+WD ++ C ++ GH+ V+ + + D + S D T+++W++
Sbjct: 238 IISGLRDNSIKIWD-KQSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVS 293
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHTH 230
S + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 294 SGEVLNTLIHHNEAVLHLRFCNG----LMVTCSKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGY 290
V+ V F + I++ S D T+++W +T TLN + + Y R +V G
Sbjct: 350 AVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 405
Query: 291 DEGTI 295
+ TI
Sbjct: 406 SDNTI 410
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 34/91 (37%), Positives = 54/91 (59%)
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
+ KGV C+ Y D +I+G D++ K+WD Q+ C++ L GHT +V +C + +
Sbjct: 224 NSKGVYCLQY----DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LCLQYDERV 277
Query: 244 IITGSEDGTVRIWHATTYRLENTLNYGLERV 274
I+TGS D TVR+W ++ + NTL + E V
Sbjct: 278 IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAV 308
Score = 158 (60.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 53/190 (27%), Positives = 87/190 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVAR--KQWVVAGADDMFIRVYNYNTMDKVKVF 95
++ +W+ S T V + R+A V +++V+ + D I+V++ +T + V+
Sbjct: 326 SIAVWDMASATDISLRRVL-VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
H I C+ L V+S S D I+LWD E G C ++ EGH V + F D
Sbjct: 385 NGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF---DN 438
Query: 156 NTFASASLDRTIKIWNLGSP-DPNF--------TLDAHQKGVNCVDYFTGGDKPYLITGS 206
S + D IK+W+L + DP TL H V + + D+ +I+ S
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF----DEFQIISSS 494
Query: 207 DDHTAKVWDY 216
D T +WD+
Sbjct: 495 HDDTILIWDF 504
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 360 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 415
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 416 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 471
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 472 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 502
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 244 (91.0 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 81/325 (24%), Positives = 141/325 (43%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
R+ K +VK V HP+ + SG +++ T+ + + + PV +
Sbjct: 249 RITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTV 308
Query: 64 KFVARKQWVVAGADDMF-IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
+W+ G+ + + VY + + + + H D +A P V+++S+D
Sbjct: 309 SVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGK 368
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TL 181
IK+WD G+ C FE H+ V V F + F+S SLD T++ W+L NF T
Sbjct: 369 IKVWDITSGF-CLATFEEHTSSVTAVQFAKRGQVMFSS-SLDGTVRAWDL-IRYRNFRTF 425
Query: 182 DAHQK-GVNCVDYFTGGDKPYLITGS-DDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
++ NC+ G+ + GS D+ VW QT + L GH VS + F
Sbjct: 426 TGTERIQFNCLAVDPSGE--VVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQ 483
Query: 240 ELPIIITGSEDGTVRIWH--ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
E ++ + S D T+RIW + ++E Y V A+ + + + +G I +
Sbjct: 484 ENSVLASASWDKTIRIWSIFGRSQQVEPIEVYS--DVLALSMRPDGKEVAVSTLKGQISI 541
Query: 298 -KIGREEPVASMDNSGKIIWAKHNE 321
I + V ++D II + N+
Sbjct: 542 FNIEDAKQVGNIDCRKDIISGRFNQ 566
Score = 171 (65.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 53/199 (26%), Positives = 88/199 (44%)
Query: 77 DDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
+++ I Y++ + K F A+ ++CV HP + +L+D + Q
Sbjct: 239 EEVDISKYSWR-ITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQ 297
Query: 137 IFEGHSHYVMQVTFNPK-DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
+ G + V V+ N + F S+ L + + ++ S H N + Y
Sbjct: 298 LSMGQNP-VNTVSVNQTGEWLAFGSSKLGQLL-VYEWQSESYILKQQGHFDSTNSLAYSP 355
Query: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
G + ++T S+D KVWD + C+ T E HT +V+AV F ++ + S DGTVR
Sbjct: 356 DGSR--VVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRA 413
Query: 256 WHATTYRLENTLNYGLERV 274
W YR T G ER+
Sbjct: 414 WDLIRYRNFRTFT-GTERI 431
Score = 46 (21.3 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 419 FQEKRSVRPTFSAERIY---GGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNL 469
F K S R F Y G ++A +N+ IC YD L++R V+ +N+
Sbjct: 569 FTAKNSERSKFFTTIHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVS-RNM 621
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 245 (91.3 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 71/290 (24%), Positives = 128/290 (44%)
Query: 51 KSFEVTELPVRSAKF----VARK--QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRC 104
+++++ E SA + RK + +V G +D + ++ + + H+ I
Sbjct: 5 RAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDS 64
Query: 105 VAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
V + V + + IKLWD E+ + + GH + V F+P FAS SLD
Sbjct: 65 VTFDASEGLVAAGAASGTIKLWDLEEAKV-VRTLTGHRSNCVSVNFHPFG-EFFASGSLD 122
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
+KIW++ T H +GVN + FT D ++++G +D+ KVWD +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLR-FTP-DGRWIVSGGEDNVVKVWDLTAGKLLHE 180
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSR 284
+ H + ++ FHP ++ TGS D TV+ W T+ L + V + + +
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240
Query: 285 RIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
++ G E +KI EP+ D + W+ +++ K +G Y
Sbjct: 241 SVLCGLQES---LKIFSWEPIRCHDGVD-VGWSNLSDMNVHEGKLLGCSY 286
Score = 174 (66.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/250 (19%), Positives = 110/250 (44%)
Query: 15 SERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVA 74
S + SV SE + A SGT+ +W+ + + ++ S F ++ +
Sbjct: 59 SSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFAS 118
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
G+ D +++++ + ++ HT + + P +++S +D ++K+WD G +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 178
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
+ F+ H + + F+P + A+ S D+T+K W+L + + + GV C+ +
Sbjct: 179 HE-FKSHEGKIQSLDFHPHEF-LLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFN 236
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
G ++ G + + K++ ++ C ++ N+S + H E ++ V
Sbjct: 237 PDGKS--VLCGLQE-SLKIFSWEPIRCHDGVDVGWSNLSDMNVH-EGKLLGCSYNQNCVG 292
Query: 255 IWHATTYRLE 264
+W R E
Sbjct: 293 VWVVDLSRTE 302
Score = 43 (20.2 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 765 SKVSEIV---AIWRKDLQKVNPKAAESLADPEEY 795
S +S +V A +++ K NPKA + + E+Y
Sbjct: 435 SGISTVVPNAAASKRNFGKANPKANPPVVNKEDY 468
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 235 (87.8 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 57/226 (25%), Positives = 102/226 (45%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ GHT V+ V FHP ++ +GS D T+R W +++
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV 223
Score = 212 (79.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/224 (28%), Positives = 100/224 (44%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVC---IWNYQSQTMAKSFEVTELPVRSAKF 65
+++ + V S+ L + +LA+ G C +W+ S PV S +
Sbjct: 14 QEIVAHASNVSSLVLGKASGRLLAT--GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
++ +VAG+ IRV++ ++ H I + HP +V S S D IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 126 WDWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
WD KG C + GHS V + F+P D ASA+ D T+K+W+L + H
Sbjct: 132 WDIRRKG--CVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 185 QKGVNCVDYFTGGDKPYLI-TGSDDHTAKVWDYQTKSCVQTLEG 227
VN V++ YL+ +GS D T + WD + V +EG
Sbjct: 189 TGPVNVVEFHPN---EYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 33/136 (24%), Positives = 60/136 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+I R L + S+D HP ++ + + +W+ + + + VR +F
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRF 155
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSS-SDDMLIK 124
+W+ + ADD +++++ + F HT + V HP Y+L+S S D I+
Sbjct: 156 SPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIR 214
Query: 125 LWDWEKGWMCTQIFEG 140
WD EK + EG
Sbjct: 215 FWDLEK-FQVVSCIEG 229
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 227 (85.0 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 53/159 (33%), Positives = 74/159 (46%)
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT ++RC P ++S S+D IK+WD C F + V FNP T
Sbjct: 13 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFVDFNPSGT-C 70
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
ASA D+T+K+W++ H GVNC+ + G+ YLIT S D T K+ D
Sbjct: 71 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN--YLITASSDGTLKILDLL 128
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ TL+GHT V V F + +G D V +W
Sbjct: 129 EGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/152 (31%), Positives = 71/152 (46%)
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD--PNFTLDAHQKG-VNCVDYFTGG 197
H+H+V F+P D S S D+TIKIW+ + NF+ D+ G N VD+ G
Sbjct: 13 HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFS-DS--VGFANFVDFNPSG 68
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ + D T KVWD + +Q + H+ V+ + FHP +IT S DGT++I
Sbjct: 69 T--CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 126
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
RL TL V+ + + K G
Sbjct: 127 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 158
Score = 131 (51.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 37/178 (20%), Positives = 80/178 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + + V+ P I++ T+ IW+ ++ +F + F
Sbjct: 10 LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT 69
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+ + D ++V++ ++ ++ H+ + C++ HP+ Y++++S D +K+ D +
Sbjct: 70 CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 129
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
G + + +GH+ V V+F+ K FAS D + +W NF + H KG+
Sbjct: 130 GRLIYTL-QGHTGPVFTVSFS-KGGELFASGGADTQVLLWRT-----NFD-ELHCKGL 179
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 212 (79.7 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 54/213 (25%), Positives = 95/213 (44%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T W Q + +A + V+ L + A + + G DD + +++ N + +
Sbjct: 7 TKTAWKLQ-EIVAHASNVSSLVLGKAS----GRLLATGGDDCRVNLWSINKPNCIMSLTG 61
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT + V ++ +++ S I++WD E + + GH + + F+P
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYG-EF 119
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D IK+W++ F H + V C+ + G +L + +DDHT K+WD
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK--WLASAADDHTVKLWDLT 177
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ GHT V+ V FHP ++ +GS D
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 43/174 (24%), Positives = 81/174 (46%)
Query: 91 KVKVFEAHTDYIRCVAVHPTLPYVLSSS-DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
K++ AH + + + +L++ DD + LW K C GH+ V V
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVESVR 70
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
N + + S +I++W+L + TL H+ + +D+ G+ ++ +GS D
Sbjct: 71 LNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDT 127
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
K+WD + K CV GH+ V + F P+ + + ++D TV++W T ++
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 42/154 (27%), Positives = 79/154 (51%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V+SV L+ E I+A SG++ +W+ ++ + ++ + + S F +
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +G+ D I++++ V + H+ +RC+ P ++ S++DD +KLWD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
G M ++ F GH+ V V F+P + AS S D
Sbjct: 179 GKMMSE-FPGHTGPVNVVEFHPNEY-LLASGSSD 210
Score = 148 (57.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 30/125 (24%), Positives = 57/125 (45%)
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
W +I H+ V + A+ D + +W++ P+ +L H V V
Sbjct: 11 WKLQEIV-AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESV 69
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
T + ++ GS + +VWD + ++TL GH N+ ++ FHP + +GS+D
Sbjct: 70 RLNT--PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 127
Query: 252 TVRIW 256
+++W
Sbjct: 128 NIKLW 132
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
L TG DD +W +C+ +L GHT V +V + +I+ GS+ G++R+W
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 262 RLENTL 267
++ TL
Sbjct: 96 KILRTL 101
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 225 (84.3 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 70/241 (29%), Positives = 111/241 (46%)
Query: 87 NTMDKVKVFEAHTDYIRC--VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMC-TQIFEGHS 142
+T+ ++ F AH D RC VA +P + S D I++W E W C T + +GH
Sbjct: 3 DTLALLQKFNAHPDS-RCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQ 61
Query: 143 HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKP 200
V +V ++P N ASAS D T IW + D L+ H+ V CV + G++
Sbjct: 62 RAVRKVAWSPCG-NYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ- 119
Query: 201 YLITGSDDHTAKVWDYQTKS---CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
L T S D + +W+ + CV + HT +V V +HP ++ + S D V ++
Sbjct: 120 -LATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYK 178
Query: 258 ATT--YRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGRE-EPVASMDNSGKI 314
+ TL VW + + S +R+ D+ T VKI +E +P D + K
Sbjct: 179 EEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRT--VKIWKECQPGGGQDTAWKC 236
Query: 315 I 315
+
Sbjct: 237 V 237
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/181 (28%), Positives = 79/181 (43%)
Query: 6 EIKRKLAQRSER-VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E K L +R V+ V P ++ ++ + T CIW ++ + V E K
Sbjct: 51 ECKTVLQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDF-ECLTVLEGHENEVK 109
Query: 65 FVARKQWVVAG------ADDMFIRVYNYNTMDK---VKVFEAHTDYIRCVAVHPTLPYVL 115
VA W +G + D + ++ + D+ V V +HT ++ V HPT +
Sbjct: 110 CVA---WAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLA 166
Query: 116 SSSDDMLIKLWDWEKG-WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
S S D + ++ E W C EGH+ V +TF+P AS S DRT+KIW
Sbjct: 167 SCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTFDPSGQR-LASCSDDRTVKIWKECQ 225
Query: 175 P 175
P
Sbjct: 226 P 226
Score = 146 (56.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 51/185 (27%), Positives = 83/185 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG-WMCTQIFEGHSHYVMQVTF 150
V V +HT ++ V HPT + S S D + ++ E W C EGH+ V +TF
Sbjct: 143 VSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Query: 151 NPKDTNTFASASLDRTIKIWNL----GSPDPNF----TLDA-HQKGVNCVDY--FTG--- 196
+P AS S DRT+KIW G D + TL H + V + + TG
Sbjct: 203 DPSGQR-LASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALA 261
Query: 197 ---GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGT 252
GD + +D TA + H+ +V+ + +HP E ++++ S++G
Sbjct: 262 TACGDDGVRVF-KEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNGE 320
Query: 253 VRIWH 257
+ +W+
Sbjct: 321 IAVWN 325
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 233 (87.1 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 61/237 (25%), Positives = 107/237 (45%)
Query: 20 SVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDM 79
++ L S+ + + G+V +W+ S E + V + +++ D
Sbjct: 271 TLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDH 330
Query: 80 FIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFE 139
R+++ +++ E H+ + + HP + D ++WD G C E
Sbjct: 331 SWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTG-RCVMFLE 389
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH + + F+P + A+ S D K+W+L +T+ AHQ V+ V F D
Sbjct: 390 GHIKEIYSINFSPNGFHV-ATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVK-FQPNDG 447
Query: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
YL+TG+ D+TAK+W + S ++TL GH V V P+ +I T S D T ++W
Sbjct: 448 HYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 196 (74.1 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 51/206 (24%), Positives = 87/206 (42%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
P+ +F + +V + +++ ++ H + ++ HP L S
Sbjct: 218 PISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEES 277
Query: 119 D--------DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
D D +KLW + I EGHS V +VT++P + D + ++W
Sbjct: 278 DVNMASCAADGSVKLWSLDSDEPIADI-EGHSMRVARVTWHPSG-RFLGTTCYDHSWRLW 335
Query: 171 NLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH 230
+L + + H KGV+ + + G TG D A+VWD +T CV LEGH
Sbjct: 336 DLEVQEEILHQEGHSKGVHDLHFHPDGSLAG--TGGLDSFARVWDLRTGRCVMFLEGHIK 393
Query: 231 NVSAVCFHPELPIIITGSEDGTVRIW 256
+ ++ F P + TGS D ++W
Sbjct: 394 EIYSINFSPNGFHVATGSGDNACKVW 419
Score = 186 (70.5 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 53/198 (26%), Positives = 92/198 (46%)
Query: 109 PTLPYVLSSSDDMLIKLWDWEKGWMCTQI--FEGHSHYVMQVTFNPKDTNTF-------A 159
P ++++S L KLW K CT I GH+ V ++F+P+ T T A
Sbjct: 226 PNSKLLVTASWSGLCKLW---KVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMA 282
Query: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
S + D ++K+W+L S +P ++ H V V + G +L T DH+ ++WD + +
Sbjct: 283 SCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGR--FLGTTCYDHSWRLWDLEVQ 340
Query: 220 SCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY 279
+ EGH+ V + FHP+ + TG D R+W T R L ++ +++I +
Sbjct: 341 EEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINF 400
Query: 280 MKSSRRIVIGYDEGTIMV 297
+ + G + V
Sbjct: 401 SPNGFHVATGSGDNACKV 418
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 56/200 (28%), Positives = 77/200 (38%)
Query: 15 SERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVA 74
S RV V HPS ++ + Y + +W+ + Q E V F
Sbjct: 308 SMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGT 367
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
G D F RV++ T V E H I + P +V + S D K+WD + C
Sbjct: 368 GGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQR-RC 426
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
H + V V F P D + + + D T KIW P TL H+ V VD
Sbjct: 427 IYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLS 486
Query: 195 TGGDKPYLITGSDDHTAKVW 214
G + T S D T K+W
Sbjct: 487 PDGQ--LIATCSYDRTFKLW 504
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 233 (87.1 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 69/252 (27%), Positives = 125/252 (49%)
Query: 9 RKLAQRSERVKSVD-LHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
+++ RSE K V L + I++ L ++ IW+ S K V ++
Sbjct: 211 QRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE 270
Query: 68 RKQWVVAGADDMFI-RVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
R +V G+ D + RV++ NT + + H + + + L +++ S D I +W
Sbjct: 271 RV--IVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL--MVTCSKDRSIAVW 326
Query: 127 DWEKGWMCT--QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
D T ++ GH V V F+ K SAS DRTIK+W+ + + TL+ H
Sbjct: 327 DMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTSTCEFVRTLNGH 383
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
++G+ C+ Y D+ +++GS D+T ++WD + +C++ LEGH V + F + I
Sbjct: 384 KRGIACLQY---RDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--I 437
Query: 245 ITGSEDGTVRIW 256
++G+ DG +++W
Sbjct: 438 VSGAYDGKIKVW 449
Score = 158 (60.7 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
E+ L +E V + L S ++ ++ +W+ S T V + R+A
Sbjct: 292 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVN 348
Query: 66 VAR--KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
V +++V+ + D I+V++ +T + V+ H I C+ L V+S S D I
Sbjct: 349 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 406
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNF--- 179
+LWD E G C ++ EGH V + F D S + D IK+W+L + DP
Sbjct: 407 RLWDIECG-ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPAS 462
Query: 180 -----TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
TL H V + + D+ +I+ S D T +WD+
Sbjct: 463 TLCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDF 500
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTI-KIWNL 172
++S D IK+WD + C ++ GH+ V+ + + D + S D T+ ++W++
Sbjct: 233 IISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVSRVWDV 288
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV---QTLEGHT 229
+ + TL H + V + + G ++T S D + VWD + + + + L GH
Sbjct: 289 NTGEVLNTLIHHNEAVLHLRFSNG----LMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 344
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
V+ V F + I++ S D T+++W +T TLN + + Y R +V G
Sbjct: 345 AAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSG 400
Query: 290 YDEGTI 295
+ TI
Sbjct: 401 SSDNTI 406
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 113 YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Y++S+S D IK+W + GH + + + + S S D TI++W++
Sbjct: 356 YIVSASGDRTIKVWSTSTCEF-VRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI 411
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ---------TKSCVQ 223
L+ H++ V C+ + D +++G+ D KVWD Q + C++
Sbjct: 412 ECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLR 467
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
TL H+ V + F E II + S D T+ IW
Sbjct: 468 TLVEHSGRVFRLQFD-EFQII-SSSHDDTILIW 498
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 249 (92.7 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 83/340 (24%), Positives = 147/340 (43%)
Query: 48 TMAKSFEVTELPVRSAKF----VARK--QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
T +++++ E SA + RK + +V G +D + ++ + + H+
Sbjct: 2 TTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG 61
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
I V + V + + IKLWD E+ + + GH + V F+P FAS
Sbjct: 62 IDSVTFDASEVLVAAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFG-EFFASG 119
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
SLD +KIW++ T H +GVN + FT D ++++G +D+ KVWD
Sbjct: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR-FTP-DGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
+ + H + ++ FHP ++ TGS D TV+ W T+ L + V + +
Sbjct: 178 LTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNP 237
Query: 282 SSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYE------ 335
+ ++ G E +KI EP+ D + W++ +++ K +G Y
Sbjct: 238 DGKTVLCGLQES---LKIFSWEPIRCHDGVD-VGWSRLSDMNVHEGKLLGCSYNQSCVGV 293
Query: 336 -VTDGERL-PLAVKELGTCDLYPQSLKHNPNGRFVVVCGD 373
V D R P + + +P+ K + +GR VV D
Sbjct: 294 WVVDLSRTEPCMAGDTAQSNGHPE--KRSCSGRDPVVLND 331
Score = 184 (69.8 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 70/346 (20%), Positives = 149/346 (43%)
Query: 15 SERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVA 74
S + SV SE + A SGT+ +W+ + + ++ S F ++ +
Sbjct: 59 SSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS 118
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
G+ D +++++ + ++ HT + + P +V+S +D ++K+WD G +
Sbjct: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
T+ F+ H + + F+P + A+ S DRT+K W+L + + + GV C+ +
Sbjct: 179 TE-FKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFN 236
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
G ++ G + + K++ ++ C ++ +S + H E ++ V
Sbjct: 237 PDGKT--VLCGLQE-SLKIFSWEPIRCHDGVDVGWSRLSDMNVH-EGKLLGCSYNQSCVG 292
Query: 255 IWHATTYRLENTLNYGLERVWAIGYMK----SSRRIVIGYDEG--TIMVKIG---REEPV 305
+W R E + G + + G+ + S R V+ D T++ K+ +P+
Sbjct: 293 VWVVDLSRTEPCMA-G-DTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPL 350
Query: 306 ASMDNS-GKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELG 350
S G++ +++++ T KS+G + E K LG
Sbjct: 351 LKETKSLGRLSVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLG 396
Score = 37 (18.1 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 759 ARSYLPSKVSEIVAIWRKDLQKVNPKA 785
A S + + VS A R++ K NPKA
Sbjct: 434 ATSGVSTAVSN-AATSRRNFTKANPKA 459
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 219 (82.2 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 69/269 (25%), Positives = 120/269 (44%)
Query: 72 VVAGADDMFIRVYNY--NTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
VV G+ D ++V+ + +D E H + V + TLP SSS D I+LWD +
Sbjct: 35 VVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLD 94
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
G I G + F+P D+ A+ + + I+ + S ++LD K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
+ Y G YL +G+ D ++D T + TLEGH + ++ F P+ +++T S+
Sbjct: 153 SIAYSPDGK--YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 250 DGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASM 308
DG ++I+ L TL+ V + + V + ++ V +G V +
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 270
Query: 309 DNSGKIIWA-KHNEIQTVNIKSVGADYEV 336
+ +W K+N + I SVG D E+
Sbjct: 271 FDHQDQVWGVKYNGNGS-KIVSVGDDQEI 298
Score = 205 (77.2 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 59/253 (23%), Positives = 113/253 (44%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
RL+++ L V SVD+ + P +S + +W+ + KS + + +
Sbjct: 53 RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTL 112
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F Q++ G + ++ + K + +I +A P Y+ S + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + + EGH+ + +TF+P D+ +AS D IKI+++ + TL
Sbjct: 173 NIFDIATGKLLHTL-EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + D + ++ S D + KVWD T++CV T H V V ++
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK 288
Query: 244 IITGSEDGTVRIW 256
I++ +D + ++
Sbjct: 289 IVSVGDDQEIHVY 301
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 59/210 (28%), Positives = 104/210 (49%)
Query: 16 ERVKSVDLHPSEPWILA----SLY--SGT----VCIWNYQSQTMAKSFEVTELPVRSAKF 65
+++KS+D P + W LA S Y +GT V I+ +S S + + S +
Sbjct: 97 KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY 156
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+++ +GA D I +++ T + E H IR + P ++++SDD IK+
Sbjct: 157 SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI 216
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQ 185
+D + + + GH+ +V+ V F P DT+ F S+S D+++K+W++G+ T HQ
Sbjct: 217 YDVQHANLAGTL-SGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCVHTFFDHQ 274
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
V V Y G K +++ DD V+D
Sbjct: 275 DQVWGVKYNGNGSK--IVSVGDDQEIHVYD 302
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 61/270 (22%), Positives = 119/270 (44%)
Query: 26 SEPWILASLYSGTVCIWNYQSQTMAK--SFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
SE + SL V +W + + + S E +L V S + + D IR+
Sbjct: 32 SETVVTGSL-DDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ + ++K +A +A P Y+ + + + ++ E G + +
Sbjct: 91 WDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGK 149
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
+++ + ++P D AS ++D I I+++ + TL+ H + + + D L+
Sbjct: 150 FILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLV 206
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
T SDD K++D Q + TL GH V V F P+ ++ S D +V++W T
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Query: 264 ENTLNYGLERVWAIGYMKSSRRIV-IGYDE 292
+T ++VW + Y + +IV +G D+
Sbjct: 267 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 296
Score = 145 (56.1 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 72/300 (24%), Positives = 129/300 (43%)
Query: 96 EAHTDYIRCVA----VHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ-IFEGHSHYVMQVTF 150
+AH D I VA V++ S D L+K+W W + Q EGH V+ V
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDI 72
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ AS+SLD I++W+L + ++DA V+ D YL TG+
Sbjct: 73 S-HTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGP--VDAWTLAFSPDSQYLATGTHVGK 129
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++ ++ +L+ + ++ + P+ + +G+ DG + I+ T +L +TL
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSV 330
+ ++ + S+ +V D+G I + + +A SG W +N+
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWV-------LNVAFC 241
Query: 331 GAD-YEVTDGERLPLAVKELGT--C-----DLYPQ--SLKHNPNGRFVVVCGDGEYI-IY 379
D + V+ + V ++GT C D Q +K+N NG +V GD + I +Y
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L R + + S+ P ++ + G + I++ + + + E +P+RS F Q
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD +I++Y+ + H ++ VA P + +SSS D +K+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
C F H V V +N + S D+ I +++
Sbjct: 264 R-TCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHVYD 302
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 226 (84.6 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 70/265 (26%), Positives = 116/265 (43%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP---VR 61
++ +R L +V +D + I++S G V +W+ S T K VT +P V
Sbjct: 53 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWD--SFTTNKEHAVT-MPCTWVM 109
Query: 62 SAKFVARKQWVVAGADDMFIRVY------NYNTMDKVKVFEAHTDYIR-CVAVHPTLPYV 114
+ + + G D VY N N K K HT+Y+ C + + +
Sbjct: 110 ACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQI 169
Query: 115 LSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT-NTFASASLDRTIKIWNLG 173
L++S D LWD E G + Q F GH V+ + P +T NTF S D+ +W++
Sbjct: 170 LTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT--KSCVQTLEGHTHN 231
S + H+ +N V Y+ GD +GSDD T +++D + + + + E
Sbjct: 229 SGQCIQAFETHESDINSVRYYPSGDA--FASGSDDATCRLYDLRADREVAIYSKESIIFG 286
Query: 232 VSAVCFHPELPIIITGSEDGTVRIW 256
S+V F ++ G D T+ +W
Sbjct: 287 ASSVDFSLSGRLLFAGYNDYTINVW 311
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSDDMLIKLWD 127
Q ++ + D +++ + ++ F H + C+ + P T +S D +WD
Sbjct: 167 QQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 226
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK- 186
G C Q FE H + V + P + FAS S D T ++++L + D + + +
Sbjct: 227 MRSG-QCIQAFETHESDINSVRYYPSG-DAFASGSDDATCRLYDLRA-DREVAIYSKESI 283
Query: 187 --GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
G + VD+ G L G +D+T VWD S V L GH + VS + P+
Sbjct: 284 IFGASSVDFSLSGR--LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF 341
Query: 245 ITGSEDGTVRIW 256
+GS D T+R+W
Sbjct: 342 CSGSWDHTLRVW 353
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
H++Y+ +F D +AS D T +W++ S + H V C+D
Sbjct: 152 HTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
++G D A VWD ++ C+Q E H ++++V ++P +GS+D T R++
Sbjct: 212 TFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRA 271
Query: 261 YRLENTLNYGLERVW----AIGYMKSSRRIVIGYDEGTIMV 297
R E + Y E + ++ + S R + GY++ TI V
Sbjct: 272 DR-EVAI-YSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 310
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 18 VKSVDLHPSEPW--ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
V +DL PSE ++ +W+ +S ++FE E + S ++ +G
Sbjct: 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASG 258
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP--YVLSSSDDMLIKLWDWEKGWM 133
+DD R+Y+ +V ++ + +V +L + + +D I +WD KG
Sbjct: 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 318
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
+ +F GH + V + +P D F S S D T+++W
Sbjct: 319 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 353
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 233 (87.1 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 63/222 (28%), Positives = 102/222 (45%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+ R L + + S+D +++ TVC+W+ ++ K T+ V + F
Sbjct: 380 VYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ-KLILHTDDGVTTVMFS 438
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Q++ AG+ D IR++ ++ V+ H + + VA P Y++S S D IKLW
Sbjct: 439 PDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 497
Query: 127 D-----------WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP 175
+ +++G +C Q F GH +++ VT +P D S S DRTI+ W+ SP
Sbjct: 498 ELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSP-DGKWIISGSKDRTIQFWSPDSP 556
Query: 176 DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
TL H V V G TGS D A++W Y+
Sbjct: 557 HSQLTLQGHNNSVISVAVSPNGH--CFATGSGDLRARIWSYE 596
Score = 218 (81.8 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 66/251 (26%), Positives = 110/251 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+SV P ++ + + IW+ + + + E + S F + +V+G+
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDY-IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
D + +++ ++ + HTD + V P ++ + S D +I++W G + Q
Sbjct: 409 DRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQ 465
Query: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
+ GH V V F+P D S SLD TIK+W L N +++G C FTG
Sbjct: 466 L-HGHEESVYSVAFSP-DGKYLVSGSLDNTIKLWELQCVS-NVAPSMYKEGGICKQTFTG 522
Query: 197 G-----------DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
D ++I+GS D T + W + TL+GH ++V +V P
Sbjct: 523 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFA 582
Query: 246 TGSEDGTVRIW 256
TGS D RIW
Sbjct: 583 TGSGDLRARIW 593
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 63/223 (28%), Positives = 100/223 (44%)
Query: 57 ELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLS 116
+L VRS F +++ G +D IR+++ ++ H I + ++S
Sbjct: 346 DLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVS 405
Query: 117 SSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD 176
S D + LWD E G ++ V V F+P D A+ SLD+ I+IW S
Sbjct: 406 GSGDRTVCLWDVEAGEQ--KLILHTDDGVTTVMFSP-DGQFIAAGSLDKVIRIWT-SSGT 461
Query: 177 PNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS------------CVQT 224
L H++ V V + G YL++GS D+T K+W+ Q S C QT
Sbjct: 462 LVEQLHGHEESVYSVAFSPDGK--YLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 519
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
GH + +V P+ II+GS+D T++ W + + TL
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTL 562
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 238 (88.8 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 313
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 373
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 374 HEGMIWSLAWHPLGHILCSGSNDHT 398
Score = 188 (71.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 164 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 222
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 223 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 282
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 283 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 341 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 399
Query: 254 RIW 256
+ W
Sbjct: 400 KFW 402
Score = 182 (69.1 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 59/265 (22%), Positives = 118/265 (44%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV ++ + +V GA ++N T + + +AH +R + ++L++
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++F+ H + + +F+P D N FA+ S D T++IW+
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CVD+ K +++GS D K WD +T + TL H + V V
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 295
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
+ ++T S D +++ + E + G ++ A+ + + G +G+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS 355
Query: 295 IMV-KIGREEPVASMDNSGK-IIWA 317
++ +G E+ V M+ + + +IW+
Sbjct: 356 LLFWHVGVEKEVGGMEMAHEGMIWS 380
Score = 147 (56.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 238 (88.8 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 136 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 194
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 195 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 251
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 252 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 309
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 310 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 369
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 370 HEGMIWSLAWHPLGHILCSGSNDHT 394
Score = 188 (71.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 160 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 218
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 219 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 278
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 279 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 336
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 337 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 395
Query: 254 RIW 256
+ W
Sbjct: 396 KFW 398
Score = 182 (69.1 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 59/265 (22%), Positives = 118/265 (44%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV ++ + +V GA ++N T + + +AH +R + ++L++
Sbjct: 117 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 176
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++F+ H + + +F+P D N FA+ S D T++IW+
Sbjct: 177 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEE 233
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CVD+ K +++GS D K WD +T + TL H + V V
Sbjct: 234 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 291
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
+ ++T S D +++ + E + G ++ A+ + + G +G+
Sbjct: 292 LNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS 351
Query: 295 IMV-KIGREEPVASMDNSGK-IIWA 317
++ +G E+ V M+ + + +IW+
Sbjct: 352 LLFWHVGVEKEVGGMEMAHEGMIWS 376
Score = 147 (56.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 192 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 251
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 252 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 311
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 312 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 371
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 372 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 398
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 238 (88.8 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 313
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 373
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 374 HEGMIWSLAWHPLGHILCSGSNDHT 398
Score = 188 (71.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 164 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 222
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 223 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 282
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 283 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 341 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 399
Query: 254 RIW 256
+ W
Sbjct: 400 KFW 402
Score = 182 (69.1 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 59/265 (22%), Positives = 118/265 (44%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV ++ + +V GA ++N T + + +AH +R + ++L++
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++F+ H + + +F+P D N FA+ S D T++IW+
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CVD+ K +++GS D K WD +T + TL H + V V
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 295
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
+ ++T S D +++ + E + G ++ A+ + + G +G+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS 355
Query: 295 IMV-KIGREEPVASMDNSGK-IIWA 317
++ +G E+ V M+ + + +IW+
Sbjct: 356 LLFWHVGVEKEVGGMEMAHEGMIWS 380
Score = 147 (56.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 238 (88.8 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 313
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 373
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 374 HEGMIWSLAWHPLGHILCSGSNDHT 398
Score = 188 (71.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 164 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 222
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 223 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 282
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 283 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 341 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 399
Query: 254 RIW 256
+ W
Sbjct: 400 KFW 402
Score = 182 (69.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 59/265 (22%), Positives = 118/265 (44%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV ++ + +V GA ++N T + + +AH +R + ++L++
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++F+ H + + +F+P D N FA+ S D T++IW+
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CVD+ K +++GS D K WD +T + TL H + V V
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 295
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
+ ++T S D +++ + E + G ++ A+ + + G +G+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS 355
Query: 295 IMV-KIGREEPVASMDNSGK-IIWA 317
++ +G E+ V M+ + + +IW+
Sbjct: 356 LLFWHVGVEKEVGGMEMAHEGMIWS 380
Score = 147 (56.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 238 (88.8 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 313
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 373
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 374 HEGMIWSLAWHPLGHILCSGSNDHT 398
Score = 188 (71.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 164 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 222
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 223 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 282
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 283 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 341 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 399
Query: 254 RIW 256
+ W
Sbjct: 400 KFW 402
Score = 182 (69.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 59/265 (22%), Positives = 118/265 (44%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV ++ + +V GA ++N T + + +AH +R + ++L++
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++F+ H + + +F+P D N FA+ S D T++IW+
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CVD+ K +++GS D K WD +T + TL H + V V
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 295
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
+ ++T S D +++ + E + G ++ A+ + + G +G+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS 355
Query: 295 IMV-KIGREEPVASMDNSGK-IIWA 317
++ +G E+ V M+ + + +IW+
Sbjct: 356 LLFWHVGVEKEVGGMEMAHEGMIWS 380
Score = 147 (56.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 238 (88.8 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 313
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 314 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 373
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 374 HEGMIWSLAWHPLGHILCSGSNDHT 398
Score = 188 (71.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 164 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 222
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 223 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 282
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 283 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 340
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 341 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 399
Query: 254 RIW 256
+ W
Sbjct: 400 KFW 402
Score = 182 (69.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 59/265 (22%), Positives = 118/265 (44%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV ++ + +V GA ++N T + + +AH +R + ++L++
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
+K W + ++F+ H + + +F+P D N FA+ S D T++IW+
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
L H V CVD+ K +++GS D K WD +T + TL H + V V
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 295
Query: 237 FHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGT 294
+ ++T S D +++ + E + G ++ A+ + + G +G+
Sbjct: 296 LNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS 355
Query: 295 IMV-KIGREEPVASMDNSGK-IIWA 317
++ +G E+ V M+ + + +IW+
Sbjct: 356 LLFWHVGVEKEVGGMEMAHEGMIWS 380
Score = 147 (56.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 196 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 255
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 256 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 315
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 316 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 375
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 376 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 402
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 241 (89.9 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 82/280 (29%), Positives = 130/280 (46%)
Query: 71 WVVAGADDMFIRVYNYNTMD-KVKVFEAHTDYIRCV-AVH-PTL-----P-YVLSSSDDM 121
W+ + D V+ YN K ++ + + V AV P + P ++L++S+D+
Sbjct: 402 WIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPNIVSKGYPEFLLTASNDL 461
Query: 122 LIKLWDWEK--GWMCTQI-----FEGHSHY--VMQVTFNPKDTNTFASASLDRTIKIWNL 172
IK W K M QI + H+H + ++ +P D+ FA+AS D+T KIWNL
Sbjct: 462 TIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDS-IFATASYDKTCKIWNL 520
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
+ + TL H++G+ V F DK L T S D T K+W T S ++TLEGHT+ V
Sbjct: 521 ENGELEATLANHKRGLWDVS-FCQYDK-LLATSSGDKTVKIWSLDTFSVMKTLEGHTNAV 578
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDE 292
F + +I+ DG ++IW ++ TL+ R+WA+ M IV +
Sbjct: 579 QRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADAD 638
Query: 293 GTIMV-KIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVG 331
G K E+ + K+ + +Q N S G
Sbjct: 639 GVFQFWKDCTEQEIEEEQEKAKLQVEQEQSLQ--NYMSKG 676
Score = 135 (52.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/155 (21%), Positives = 71/155 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ ++ + P++ + Y T IWN ++ + + + + F + + +
Sbjct: 494 INALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSG 553
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYI-RCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
D +++++ +T +K E HT+ + RC ++ ++S D LIK+WD G C +
Sbjct: 554 DKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQ-KQLISCGADGLIKIWDCSSG-ECLK 611
Query: 137 IFEGHSHYVMQV-TFNPKDTNTFASASLDRTIKIW 170
+GH++ + + T N D + SA D + W
Sbjct: 612 TLDGHNNRLWALSTMN--DGDMIVSADADGVFQFW 644
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 55/244 (22%), Positives = 95/244 (38%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFE---GHSHYVMQV 148
V+++E H D + + ++ ++S D +W + + I+ GHS V V
Sbjct: 381 VEIYEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAV 440
Query: 149 TF-N--PKDTNTFA-SASLDRTIKIWNLGSPDPNFTLDA----------HQKGVNCVDYF 194
N K F +AS D TIK W + P P ++D H +
Sbjct: 441 GLPNIVSKGYPEFLLTASNDLTIKKWII--PKPTASMDVQIIKVSEYTRHAHEKDINALS 498
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
+ T S D T K+W+ + TL H + V F ++ T S D TV+
Sbjct: 499 VSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVK 558
Query: 255 IWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGK 313
IW T+ + TL V ++ ++++ +G I + E + ++D
Sbjct: 559 IWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNN 618
Query: 314 IIWA 317
+WA
Sbjct: 619 RLWA 622
Score = 44 (20.5 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQT 48
+PL +EI + + S+D WI + T +W Y +
Sbjct: 377 LPLDVEIYEG---HEDLLNSLDATEDGLWIATASKDNTAIVWRYNENS 421
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 231 (86.4 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 71/328 (21%), Positives = 149/328 (45%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
++ R ++ + V+++ + S W T+ +W+ S + + +R +
Sbjct: 198 KLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEV 257
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+R ++ + +D + ++ + +V+ + H + VA+HPTL + S D +++
Sbjct: 258 SSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRV 317
Query: 126 WDWEKGWMCTQIFE--GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
WD IFE GH ++ + D S S+D T+K+W+L + TL
Sbjct: 318 WDMRTR---ANIFEMKGHKGTILSLKSQNADPQVI-SGSMDTTVKLWDLATGTSAATLTN 373
Query: 184 HQKGVNCVDYFTGGDKPY-LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
H+KGV + +K Y TG+ D+ K W S ++ L GH ++A+ + +
Sbjct: 374 HKKGVRSMVIH---EKEYSFATGAADNI-KQWKCPDGSFIKNLSGHNSIINAMALNAD-N 428
Query: 243 IIITGSEDGTVRIWH-ATTYRLENTLNY----GLER---VWAIGYMKSSRRIVIGYDEGT 294
++++G ++G++ W T Y + T + LE ++ + + K+ R++ + T
Sbjct: 429 VLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRLITCEADKT 488
Query: 295 IMVKIGREEPVASMDNSGKIIWA-KHNE 321
I K +E+ A+ + W K+N+
Sbjct: 489 I--KFYKEDEDATPYTHPVVDWKPKNND 514
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+W W ++ GH+ +V + + K FA+ S D TIK+W+L S + TL H
Sbjct: 192 EWHPPWKLMRVISGHTGWVRAIAVD-KSNEWFATGSTDNTIKVWDLASGELKVTLTGHVS 250
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
+ ++ PYL + +D+ WD ++ V+ GH V +V HP L ++ +
Sbjct: 251 AIRGLE--VSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFS 308
Query: 247 GSEDGTVRIWHATT 260
G D VR+W T
Sbjct: 309 GGRDNCVRVWDMRT 322
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 224 (83.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 69/295 (23%), Positives = 122/295 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H ++ +L S G + IW+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T F GH+ VM ++ P DT F S + D + K+W++
Sbjct: 161 SGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH---NVSA 234
T H+ +N + +F G+ TGSDD T +++D + + T H + +++
Sbjct: 219 RQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Query: 235 VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
V F +++ G +D +W A L RV +G + G
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 201 (75.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW--- 128
+V+ + D + +++ T +KV + ++ A P+ YV D + +++
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E ++ GH+ Y+ F D N ++S D T +W++ + T H V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ D ++G+ D +AK+WD + C QT GH +++A+CF P TGS
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 249 EDGTVRIWHATTYRLENTLNYG--LERVWAIGYMKSSRRIVIGYDEGTIMV----KIGRE 302
+D T R++ + T ++ + + ++ + KS R ++ GYD+ V K R
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 303 EPVASMDN 310
+A DN
Sbjct: 306 GVLAGHDN 313
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ Q +V + D +++ T + F HT + +++ P +S + D
Sbjct: 150 RFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
KLWD +G MC Q F GH + + F P N FA+ S D T ++++L + D +
Sbjct: 209 KLWDVREG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA-DQELMTYS 265
Query: 184 HQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
H G+ V + G L+ G DD VWD L GH + VS + +
Sbjct: 266 HDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323
Query: 241 LPIIITGSEDGTVRIWH 257
+ TGS D ++IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 224 (83.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 69/295 (23%), Positives = 122/295 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H ++ +L S G + IW+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T F GH+ VM ++ P DT F S + D + K+W++
Sbjct: 161 SGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH---NVSA 234
T H+ +N + +F G+ TGSDD T +++D + + T H + +++
Sbjct: 219 RQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Query: 235 VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
V F +++ G +D +W A L RV +G + G
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 201 (75.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW--- 128
+V+ + D + +++ T +KV + ++ A P+ YV D + +++
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E ++ GH+ Y+ F D N ++S D T +W++ + T H V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ D ++G+ D +AK+WD + C QT GH +++A+CF P TGS
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 249 EDGTVRIWHATTYRLENTLNYG--LERVWAIGYMKSSRRIVIGYDEGTIMV----KIGRE 302
+D T R++ + T ++ + + ++ + KS R ++ GYD+ V K R
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 303 EPVASMDN 310
+A DN
Sbjct: 306 GVLAGHDN 313
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ Q +V + D +++ T + F HT + +++ P +S + D
Sbjct: 150 RFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
KLWD +G MC Q F GH + + F P N FA+ S D T ++++L + D +
Sbjct: 209 KLWDVREG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA-DQELMTYS 265
Query: 184 HQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
H G+ V + G L+ G DD VWD L GH + VS + +
Sbjct: 266 HDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323
Query: 241 LPIIITGSEDGTVRIWH 257
+ TGS D ++IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 224 (83.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 69/295 (23%), Positives = 122/295 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H ++ +L S G + IW+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T F GH+ VM ++ P DT F S + D + K+W++
Sbjct: 161 SGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH---NVSA 234
T H+ +N + +F G+ TGSDD T +++D + + T H + +++
Sbjct: 219 RQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Query: 235 VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
V F +++ G +D +W A L RV +G + G
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 201 (75.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW--- 128
+V+ + D + +++ T +KV + ++ A P+ YV D + +++
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E ++ GH+ Y+ F D N ++S D T +W++ + T H V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ D ++G+ D +AK+WD + C QT GH +++A+CF P TGS
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 249 EDGTVRIWHATTYRLENTLNYG--LERVWAIGYMKSSRRIVIGYDEGTIMV----KIGRE 302
+D T R++ + T ++ + + ++ + KS R ++ GYD+ V K R
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 303 EPVASMDN 310
+A DN
Sbjct: 306 GVLAGHDN 313
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ Q +V + D +++ T + F HT + +++ P +S + D
Sbjct: 150 RFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
KLWD +G MC Q F GH + + F P N FA+ S D T ++++L + D +
Sbjct: 209 KLWDVREG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA-DQELMTYS 265
Query: 184 HQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
H G+ V + G L+ G DD VWD L GH + VS + +
Sbjct: 266 HDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323
Query: 241 LPIIITGSEDGTVRIWH 257
+ TGS D ++IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 224 (83.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 69/295 (23%), Positives = 122/295 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H ++ +L S G + IW+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T F GH+ VM ++ P DT F S + D + K+W++
Sbjct: 161 SGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH---NVSA 234
T H+ +N + +F G+ TGSDD T +++D + + T H + +++
Sbjct: 219 RQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Query: 235 VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
V F +++ G +D +W A L RV +G + G
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 201 (75.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW--- 128
+V+ + D + +++ T +KV + ++ A P+ YV D + +++
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E ++ GH+ Y+ F D N ++S D T +W++ + T H V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ D ++G+ D +AK+WD + C QT GH +++A+CF P TGS
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 249 EDGTVRIWHATTYRLENTLNYG--LERVWAIGYMKSSRRIVIGYDEGTIMV----KIGRE 302
+D T R++ + T ++ + + ++ + KS R ++ GYD+ V K R
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 303 EPVASMDN 310
+A DN
Sbjct: 306 GVLAGHDN 313
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ Q +V + D +++ T + F HT + +++ P +S + D
Sbjct: 150 RFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
KLWD +G MC Q F GH + + F P N FA+ S D T ++++L + D +
Sbjct: 209 KLWDVREG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA-DQELMTYS 265
Query: 184 HQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
H G+ V + G L+ G DD VWD L GH + VS + +
Sbjct: 266 HDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323
Query: 241 LPIIITGSEDGTVRIWH 257
+ TGS D ++IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 224 (83.9 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 69/295 (23%), Positives = 122/295 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H ++ +L S G + IW+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T F GH+ VM ++ P DT F S + D + K+W++
Sbjct: 161 SGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH---NVSA 234
T H+ +N + +F G+ TGSDD T +++D + + T H + +++
Sbjct: 219 RQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFDLRADQELMTYS-HDNIICGITS 275
Query: 235 VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
V F +++ G +D +W A L RV +G + G
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 201 (75.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW--- 128
+V+ + D + +++ T +KV + ++ A P+ YV D + +++
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E ++ GH+ Y+ F D N ++S D T +W++ + T H V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ D ++G+ D +AK+WD + C QT GH +++A+CF P TGS
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 249 EDGTVRIWHATTYRLENTLNYG--LERVWAIGYMKSSRRIVIGYDEGTIMV----KIGRE 302
+D T R++ + T ++ + + ++ + KS R ++ GYD+ V K R
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 303 EPVASMDN 310
+A DN
Sbjct: 306 GVLAGHDN 313
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ Q +V + D +++ T + F HT + +++ P +S + D
Sbjct: 150 RFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
KLWD +G MC Q F GH + + F P N FA+ S D T ++++L + D +
Sbjct: 209 KLWDVREG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA-DQELMTYS 265
Query: 184 HQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
H G+ V + G L+ G DD VWD L GH + VS + +
Sbjct: 266 HDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323
Query: 241 LPIIITGSEDGTVRIWH 257
+ TGS D ++IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 238 (88.8 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 67/265 (25%), Positives = 119/265 (44%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG +WN + + + PVR+ + W++ +++ + N M+ VK+F
Sbjct: 141 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 199
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ--IFEGHSHYVMQVTFNP- 152
+AH + IR + PT + SDD +++WD+ + C + I GH V V ++P
Sbjct: 200 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLR---CHEERILRGHGADVKCVDWHPT 256
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K S + IK W+ + TL AH+ V V G+ +L+T S DH K
Sbjct: 257 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCK 314
Query: 213 VWDYQT-KSCVQTLEGHTHNVSAVCFHP-ELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++D + K +Q GH +AV +HP + +G DG++ WH + +
Sbjct: 315 LFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA 374
Query: 271 LE-RVWAIGYMKSSRRIVIGYDEGT 294
E +W++ + + G ++ T
Sbjct: 375 HEGMIWSLAWHPLGHILCSGSNDHT 399
Score = 188 (71.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 57/243 (23%), Positives = 107/243 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ ++ W+L + + G V W + K F+ + +R A F +D
Sbjct: 165 VRAMTWSHNDMWMLTADHGGYVKYWQ-SNMNNVKMFQAHKEAIREASFSPTDNKFATCSD 223
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML--IKLWDWEKGWMCT 135
D +R++++ + ++ H ++CV HPT V+S S D IK WD + G
Sbjct: 224 DGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLA 283
Query: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQKGVNCVDYF 194
+ H + VM+V N + N +AS D K++++ + + H+K V +
Sbjct: 284 TL-HAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWH 341
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVCFHPELPIIITGSEDGTV 253
+ + GSD + W + V +E H + ++ +HP I+ +GS D T
Sbjct: 342 PVHEGLFASGGSDG-SLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTS 400
Query: 254 RIW 256
+ W
Sbjct: 401 KFW 403
Score = 178 (67.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 57/252 (22%), Positives = 113/252 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V GA ++N T + + +AH +R + ++L++ +K W +
Sbjct: 135 LVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYW--QSN 192
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
++F+ H + + +F+P D N FA+ S D T++IW+ L H V CV
Sbjct: 193 MNNVKMFQAHKEAIREASFSPTD-NKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCV 251
Query: 192 DYFTGGDKPYLITGSDD--HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
D+ K +++GS D K WD +T + TL H + V V + ++T S
Sbjct: 252 DWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASR 309
Query: 250 DGTVRIWHATTYRLENTLNYGLER-VWAIGYMKSSRRIVI-GYDEGTIMV-KIGREEPVA 306
D +++ + E + G ++ A+ + + G +G+++ +G E+ V
Sbjct: 310 DHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVG 369
Query: 307 SMDNSGK-IIWA 317
M+ + + +IW+
Sbjct: 370 GMEMAHEGMIWS 381
Score = 147 (56.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 10 KLAQ-RSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
K+ Q E ++ P++ GTV IW++ + V+ +
Sbjct: 197 KMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPT 256
Query: 69 KQWVVAGADDMF--IRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K VV+G+ D I+ ++ T + AH + + V ++ ++L++S D L KL+
Sbjct: 257 KGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLF 316
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQ 185
D Q+F GH V ++P FAS D ++ W++G ++ AH+
Sbjct: 317 DIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHE 376
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
+ + + G L +GS+DHT+K W
Sbjct: 377 GMIWSLAWHPLGH--ILCSGSNDHTSKFW 403
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 233 (87.1 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 66/223 (29%), Positives = 107/223 (47%)
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + + +V G+ D +R++N T D K F HT + VA+ ++S S + +K
Sbjct: 782 FSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VK 840
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
LWD G + + G + V F+P D+ A+ D I IW+ TL+ H
Sbjct: 841 LWDAATGDLLKTLASG---FAGSVAFSP-DSRQIAAGFKDGKIFIWDAAGTLQK-TLERH 895
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
+ + + D L+T S D T K WD T VQ GH+ +V+ + P+ +I
Sbjct: 896 PGAIMSIAF--SPDVKQLVTCSTDSTIKRWDI-TIGGVQEAVGHSKHVTTMVLSPDGKVI 952
Query: 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIV 287
+GS D T+++W A T L+ TL L+ V + + +R+IV
Sbjct: 953 ASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIV 995
Score = 188 (71.2 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 66/259 (25%), Positives = 115/259 (44%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
TV +WN + + K+F V S + + +V+G+ + +++++ T D +K +
Sbjct: 797 TVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKTLAS 855
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
+ VA P + + D I +WD G + + E H +M + F+P D
Sbjct: 856 --GFAGSVAFSPDSRQIAAGFKDGKIFIWD-AAGTL-QKTLERHPGAIMSIAFSP-DVKQ 910
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
+ S D TIK W++ + H K V + D + +GS D T K+WD
Sbjct: 911 LVTCSTDSTIKRWDITIGGVQEAV-GHSKHVTTM--VLSPDGKVIASGSADKTIKLWDAA 967
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
T +TL GH V V F + I++ S + V+IW A T +++N+ + + V+ I
Sbjct: 968 TGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNS--FESDDVFTI 1024
Query: 278 -GYMKSSRRIVIGYDEGTI 295
+ I G+ G I
Sbjct: 1025 VAVSPDGKHIASGHCNGRI 1043
Score = 149 (57.5 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 49/219 (22%), Positives = 96/219 (43%)
Query: 77 DDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
D I +++ T D K+ + H+ +A +++ S D ++LW+ G + +
Sbjct: 752 DSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDL-EK 810
Query: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
F GH+ V+ V + D S S++ +K+W+ + D TL + G V +
Sbjct: 811 TFVGHTGTVLSVAIS-SDGRQIVSGSIE-AVKLWDAATGDLLKTLASGFAG--SVAF--S 864
Query: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
D + G D +WD + +TLE H + ++ F P++ ++T S D T++ W
Sbjct: 865 PDSRQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRW 923
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
T ++ + + + V + + I G + TI
Sbjct: 924 DITIGGVQEAVGHS-KHVTTMVLSPDGKVIASGSADKTI 961
Score = 137 (53.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 40/137 (29%), Positives = 63/137 (45%)
Query: 162 SLDRT-IKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS 220
S D T I +++ + D L H C D L+TGS D T ++W+ T
Sbjct: 750 SRDSTCIMLFDTATGDLQKILKGHSH--ECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGD 807
Query: 221 CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
+T GHT V +V + I++GS + V++W A T L TL G ++ +
Sbjct: 808 LEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGDLLKTLASGF--AGSVAFS 864
Query: 281 KSSRRIVIGYDEGTIMV 297
SR+I G+ +G I +
Sbjct: 865 PDSRQIAAGFKDGKIFI 881
Score = 127 (49.8 bits), Expect = 0.00061, P = 0.00061
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN-------YGL--E 272
+QTL GH+ V V F P+ I +GS+ G +++W TT L+ TL+ Y + E
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 273 RVWAIGYMKSSRRIVIGYDEGTIMV 297
+V A+ ++ S+ I+ GY +G++M+
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVML 697
Score = 63 (27.2 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQS---QTMAKSFEVTEL 58
KR+ + E+VK++ P I++ Y G+V +W+ + Q +A F ++++
Sbjct: 664 KRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKV 717
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 26/145 (17%), Positives = 60/145 (41%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKS---------FEVTELPVR 61
L SE V V P I + SG + +W+ + ++ K+ +++ + V+
Sbjct: 616 LTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVK 675
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAH-TDYIRCVAVHPTLP--YVLS-- 116
+ F+ + +++G D + +++ T D+ ++ + + + P Y L
Sbjct: 676 AMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHAG 735
Query: 117 --SSDDMLIKLWDWEKGWMCTQIFE 139
S+D I + W + C +F+
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFD 760
Score = 42 (19.8 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 285 RIVIGYDEGTI 295
R+V+GYD G +
Sbjct: 1282 RVVVGYDNGQV 1292
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 223 (83.6 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 57/226 (25%), Positives = 106/226 (46%)
Query: 36 SGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVF 95
SG V I Y+ K+ E + KF + + + D + +++ + +
Sbjct: 24 SGNVPI--YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY 81
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
E H+ I +A Y S+SDD +++WD + C ++ GH+++V V FNP +
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP-S 140
Query: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
N S S D TI+IW + + + AH ++ V + G +++ S D + K+WD
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS--LIVSASHDGSCKIWD 198
Query: 216 YQTKSCVQTL-EGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
+ +C++TL + + VS F P I+ + D T+++ + T
Sbjct: 199 AKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYAT 244
Score = 215 (80.7 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 56/188 (29%), Positives = 96/188 (51%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+ D IR++ T V++ +AH+ I V + ++S+S D K+WD ++G
Sbjct: 143 IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEG 202
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
+ + S V F+P A+LD T+K+ N + H V C+
Sbjct: 203 TCLKTLIDDKSPAVSFAKFSPNGKFILV-ATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Query: 192 -DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP-ELPIIITGSE 249
F+ + Y+++GS+D+ +WD Q ++ +Q LEGHT V +V HP + I +G+
Sbjct: 262 TSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNH 321
Query: 250 -DGTVRIW 256
D T+RIW
Sbjct: 322 LDKTIRIW 329
Score = 202 (76.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 47/165 (28%), Positives = 83/165 (50%)
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
EGH+ + V F+ D N ASAS+D+T+ +W+ + + H G++ D D
Sbjct: 40 EGHTAAISCVKFS-NDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS--DLAWSSD 96
Query: 199 KPYLITGSDDHTAKVWDYQTK-SCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Y + SDD T ++WD ++ C++ L GHT+ V V F+P +I++GS D T+RIW
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGRE 302
T + + + ++ + + IV +G+ + +E
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 55/202 (27%), Positives = 87/202 (43%)
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
TL+ H ++CV + G+ L + S D T +W S + EGH+ +S + +
Sbjct: 38 TLEGHTAAISCVKFSNDGN--LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 240 ELPIIITGSEDGTVRIWHATT-YRLENTLNYGLERVWAIGYMKSSRRIVIG-YDEGTIMV 297
+ + S+D T+RIW A + Y L V+ + + S IV G +DE TI +
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDE-TIRI 154
Query: 298 -KIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTC---- 352
++ + V + I + H I V A + DG KE GTC
Sbjct: 155 WEVKTGKCVRMIKAHSMPISSVHFNRDGSLI--VSASH---DGSCKIWDAKE-GTCLKTL 208
Query: 353 --DLYP--QSLKHNPNGRFVVV 370
D P K +PNG+F++V
Sbjct: 209 IDDKSPAVSFAKFSPNGKFILV 230
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 234 (87.4 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + ++ S D IK+WD G + + GH V V +
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSL-TGHISTVRGVIVST 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ F S D+ +K W+L H V +D D L+T S D TA+
Sbjct: 256 RSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTAR 312
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
+WD +TK+ V TL GHT+ V+ V P IITGS D T+R+W + TL +
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 273 RVWAI 277
V A+
Sbjct: 373 SVRAV 377
Score = 210 (79.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/308 (21%), Positives = 138/308 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + + P W + T+ IW+ S + S VR R ++ + +
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ ++ + H + + +HPT+ +++ S D ++WD +
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWD-VRTKASVHT 324
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH++ V V + + S D TI++W+L + TL H+K V V
Sbjct: 325 LSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP-- 381
Query: 198 DKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ Y +GS D+ K W + S +Q L GH ++ + + + ++++G+++GT+ +W
Sbjct: 382 -RHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 438
Query: 257 H-ATTY---RLENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASM 308
T Y R+ + G L+ ++A + +S R++ + TI K+ +E+ A+
Sbjct: 439 DWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI--KVYKEDDTAT- 495
Query: 309 DNSGKIIW 316
+ + + W
Sbjct: 496 EETHPVSW 503
Score = 208 (78.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W ++ GH +V + P + F + S DRTIKIW+L S +L H
Sbjct: 189 WHPPWKLYRVISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHIST 247
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V T PYL + +D K WD + ++ GH V + HP + +++T
Sbjct: 248 VRGVIVSTRS--PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 305
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
S D T RIW T +TL+ V + + +I+ G + TI
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 353
Score = 43 (20.2 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 444 SNDFICFYDWAECRLIR-RIDVTVKNLYWAD 473
S F C +D +E RL+ D T+K +Y D
Sbjct: 462 SGIFACAFDQSESRLLTAEADKTIK-VYKED 491
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 234 (87.4 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + ++ S D IK+WD G + + GH V V +
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSL-TGHISTVRGVIVST 256
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ F S D+ +K W+L H V +D D L+T S D TA+
Sbjct: 257 RSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTAR 313
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
+WD +TK+ V TL GHT+ V+ V P IITGS D T+R+W + TL +
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 273 RVWAI 277
V A+
Sbjct: 374 SVRAV 378
Score = 213 (80.0 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 66/308 (21%), Positives = 138/308 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + + P W + T+ IW+ S + S VR R ++ + +
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ ++ + H + + +HPT+ +++ S D ++WD +
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWD-VRTKASVHT 325
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH++ V V + + S D TI++W+L + TL H+K V V
Sbjct: 326 LSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP-- 382
Query: 198 DKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ Y +GS D+ K W + S +Q L GH ++ + + + ++++G+++GT+ +W
Sbjct: 383 -RHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 439
Query: 257 H-ATTY---RLENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASM 308
T Y R+ + G L+ ++A + +S R++ + TI K+ RE+ A+
Sbjct: 440 DWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI--KVYREDDTAT- 496
Query: 309 DNSGKIIW 316
+ + + W
Sbjct: 497 EETHPVSW 504
Score = 208 (78.3 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W ++ GH +V + P + F + S DRTIKIW+L S +L H
Sbjct: 190 WHPPWKLYRVISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHIST 248
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V T PYL + +D K WD + ++ GH V + HP + +++T
Sbjct: 249 VRGVIVSTRS--PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 306
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
S D T RIW T +TL+ V + + +I+ G + TI
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 354
Score = 43 (20.2 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 444 SNDFICFYDWAECRLIR-RIDVTVKNLYWAD 473
S F C +D +E RL+ D T+K +Y D
Sbjct: 463 SGIFACAFDQSESRLLTAEADKTIK-VYRED 492
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 218 (81.8 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 68/270 (25%), Positives = 123/270 (45%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKV---FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
VV G+ D ++V+ + +++++ E H + V + TLP SSS D I+LWD
Sbjct: 35 VVTGSLDDLVKVWKWRD-ERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL 93
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E G I G + F+P D+ A+ + + I+ + S ++LD K +
Sbjct: 94 ENGKQMKSIDAGPVD-AWTLAFSP-DSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ Y G YL +G+ D ++D T + TLEGH + ++ F P+ +++T S
Sbjct: 152 LSIAYSPDGK--YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS 209
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVAS 307
+DG ++I+ L TL+ V + + V + ++ V +G + +
Sbjct: 210 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHT 269
Query: 308 MDNSGKIIWA-KHNEIQTVNIKSVGADYEV 336
+ +W K+N + I SVG D E+
Sbjct: 270 FFDHQDQVWGVKYNGNGS-KIVSVGDDQEI 298
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 59/253 (23%), Positives = 114/253 (45%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
RLE++ L V SVD+ + P +S + +W+ ++ KS + + +
Sbjct: 53 RLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL 112
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F Q++ G + ++ + K + +I +A P Y+ S + D +I
Sbjct: 113 AFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + + EGH+ + +TF+P D+ +AS D IKI+++ + TL
Sbjct: 173 NIFDIATGKLLHTL-EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + D + ++ S D + KVWD T++C+ T H V V ++
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK 288
Query: 244 IITGSEDGTVRIW 256
I++ +D + ++
Sbjct: 289 IVSVGDDQEIHVY 301
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 59/213 (27%), Positives = 105/213 (49%)
Query: 13 QRSERVKSVDLHPSEPWILA----SLY--SGT----VCIWNYQSQTMAKSFEVTELPVRS 62
+ +++KS+D P + W LA S Y +GT V I+ +S S + + S
Sbjct: 94 ENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILS 153
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
+ +++ +GA D I +++ T + E H IR + P ++++SDD
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
IK++D + + + GH+ +V+ V F P DT+ F S+S D+++K+W++G+ T
Sbjct: 214 IKIYDVQHANLAGTL-SGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCIHTFF 271
Query: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
HQ V V Y G K +++ DD V+D
Sbjct: 272 DHQDQVWGVKYNGNGSK--IVSVGDDQEIHVYD 302
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 57/257 (22%), Positives = 114/257 (44%)
Query: 39 VCIWNYQSQTMAK--SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFE 96
V +W ++ + + S E +L V S + + D IR+++ ++K +
Sbjct: 44 VKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSID 103
Query: 97 AHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN 156
A +A P Y+ + + + ++ E G + + +++ + ++P D
Sbjct: 104 AGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSL-DTRGKFILSIAYSP-DGK 161
Query: 157 TFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
AS ++D I I+++ + TL+ H + + + D L+T SDD K++D
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYDV 219
Query: 217 QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWA 276
Q + TL GH V V F P+ ++ S D +V++W T +T ++VW
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWG 279
Query: 277 IGYMKSSRRIV-IGYDE 292
+ Y + +IV +G D+
Sbjct: 280 VKYNGNGSKIVSVGDDQ 296
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 72/300 (24%), Positives = 130/300 (43%)
Query: 96 EAHTDYIRCVAVHPT----LPYVLSSSDDMLIKLWDWEKGWMCTQ-IFEGHSHYVMQVTF 150
+AH D I VA + V++ S D L+K+W W + Q EGH V+ V
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDI 72
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ AS+SLD I++W+L + ++DA V+ D YL TG+
Sbjct: 73 S-HTLPIAASSSLDAHIRLWDLENGKQMKSIDAGP--VDAWTLAFSPDSQYLATGTHMGK 129
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++ ++ +L+ + ++ + P+ + +G+ DG + I+ T +L +TL
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSV 330
+ ++ + S+ +V D+G I + + +A SG W +N+
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWV-------LNVAFC 241
Query: 331 GAD-YEVTDGERLPLAVKELGT--C-----DLYPQ--SLKHNPNGRFVVVCGDGEYI-IY 379
D + V+ + V ++GT C D Q +K+N NG +V GD + I +Y
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L R + + S+ P ++ + G + I++ + + + E +P+RS F Q
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD +I++Y+ + H ++ VA P + +SSS D +K+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
C F H V V +N + S D+ I +++
Sbjct: 264 R-TCIHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHVYD 302
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 218 (81.8 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 68/270 (25%), Positives = 123/270 (45%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKV---FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
VV G+ D ++V+ + +++++ E H + V + TLP SSS D I+LWD
Sbjct: 35 VVTGSLDDLVKVWKWRD-ERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL 93
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E G I G + F+P D+ A+ + + I+ + S ++LD K +
Sbjct: 94 ENGKQMKSIDAGPVD-AWTLAFSP-DSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFI 151
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ Y G YL +G+ D ++D T + TLEGH + ++ F P+ +++T S
Sbjct: 152 LSIAYSPDGK--YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS 209
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVAS 307
+DG ++I+ L TL+ V + + V + ++ V +G + +
Sbjct: 210 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHT 269
Query: 308 MDNSGKIIWA-KHNEIQTVNIKSVGADYEV 336
+ +W K+N + I SVG D E+
Sbjct: 270 FFDHQDQVWGVKYNGNGS-KIVSVGDDQEI 298
Score = 205 (77.2 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 59/253 (23%), Positives = 113/253 (44%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
RLE++ L V SVD+ + P +S + +W+ ++ KS + + +
Sbjct: 53 RLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL 112
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F Q + G + ++ + K + +I +A P Y+ S + D +I
Sbjct: 113 AFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + + EGH+ + +TF+P D+ +AS D IKI+++ + TL
Sbjct: 173 NIFDIATGKLLHTL-EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + D + ++ S D + KVWD T++C+ T H V V ++
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK 288
Query: 244 IITGSEDGTVRIW 256
I++ +D + ++
Sbjct: 289 IVSVGDDQEIHVY 301
Score = 179 (68.1 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 56/257 (21%), Positives = 114/257 (44%)
Query: 39 VCIWNYQSQTMAK--SFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFE 96
V +W ++ + + S E +L V S + + D IR+++ ++K +
Sbjct: 44 VKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSID 103
Query: 97 AHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN 156
A +A P ++ + + + ++ E G + + +++ + ++P D
Sbjct: 104 AGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSL-DTRGKFILSIAYSP-DGK 161
Query: 157 TFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
AS ++D I I+++ + TL+ H + + + D L+T SDD K++D
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYDV 219
Query: 217 QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWA 276
Q + TL GH V V F P+ ++ S D +V++W T +T ++VW
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWG 279
Query: 277 IGYMKSSRRIV-IGYDE 292
+ Y + +IV +G D+
Sbjct: 280 VKYNGNGSKIVSVGDDQ 296
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 71/300 (23%), Positives = 130/300 (43%)
Query: 96 EAHTDYIRCVAVHPT----LPYVLSSSDDMLIKLWDWEKGWMCTQ-IFEGHSHYVMQVTF 150
+AH D I VA + V++ S D L+K+W W + Q EGH V+ V
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDI 72
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ AS+SLD I++W+L + ++DA V+ D +L TG+
Sbjct: 73 S-HTLPIAASSSLDAHIRLWDLENGKQMKSIDAGP--VDAWTLAFSPDSQHLATGTHMGK 129
Query: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
++ ++ +L+ + ++ + P+ + +G+ DG + I+ T +L +TL
Sbjct: 130 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSV 330
+ ++ + S+ +V D+G I + + +A SG W +N+
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHASWV-------LNVAFC 241
Query: 331 GAD-YEVTDGERLPLAVKELGT--C-----DLYPQ--SLKHNPNGRFVVVCGDGEYI-IY 379
D + V+ + V ++GT C D Q +K+N NG +V GD + I +Y
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L R + + S+ P ++ + G + I++ + + + E +P+RS F Q
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD +I++Y+ + H ++ VA P + +SSS D +K+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
C F H V V +N + S D+ I +++
Sbjct: 264 R-TCIHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHVYD 302
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 234 (87.4 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + ++ S D IK+WD G + + GH V V +
Sbjct: 199 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSL-TGHISTVRGVIVST 257
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ F S D+ +K W+L H V +D D L+T S D TA+
Sbjct: 258 RSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTAR 314
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
+WD +TK+ V TL GHT+ V+ V P IITGS D T+R+W + TL +
Sbjct: 315 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 374
Query: 273 RVWAI 277
V A+
Sbjct: 375 SVRAV 379
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 65/308 (21%), Positives = 138/308 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + + P W + T+ IW+ S + S VR R ++ + +
Sbjct: 208 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 267
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ ++ + H + + +HPT+ +++ S D ++WD +
Sbjct: 268 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWD-VRTKASVHT 326
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH++ V V + + S D TI++W+L + TL H+K V V
Sbjct: 327 LSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP-- 383
Query: 198 DKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ Y +GS D+ K W + S +Q L GH ++ + + + ++++G+++GT+ +W
Sbjct: 384 -RHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 440
Query: 257 H-ATTY---RLENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASM 308
T Y R+ + G L+ ++A + +S R++ + TI K+ +E+ A+
Sbjct: 441 DWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI--KVYKEDDTAT- 497
Query: 309 DNSGKIIW 316
+ + + W
Sbjct: 498 EETHPVSW 505
Score = 208 (78.3 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W ++ GH +V + P + F + S DRTIKIW+L S +L H
Sbjct: 191 WHPPWKLYRVISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHIST 249
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V T PYL + +D K WD + ++ GH V + HP + +++T
Sbjct: 250 VRGVIVSTRS--PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 307
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
S D T RIW T +TL+ V + + +I+ G + TI
Sbjct: 308 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 355
Score = 43 (20.2 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 444 SNDFICFYDWAECRLIR-RIDVTVKNLYWAD 473
S F C +D +E RL+ D T+K +Y D
Sbjct: 464 SGIFACAFDQSESRLLTAEADKTIK-VYKED 493
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 248 (92.4 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 69/259 (26%), Positives = 122/259 (47%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP----YVL 115
V S A + +++G+ D +++ + + HT I CVA+ P P + +
Sbjct: 427 VMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVAL-PKKPSTSMFAI 485
Query: 116 SSSDDMLIKLWDWEKGWMCTQIFEG------------------HSHYVMQVTFNPKDTNT 157
++SDD IKLW KG+ T G H + ++ P D
Sbjct: 486 TASDDRTIKLW---KGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPND-KI 541
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
FA+AS D +K+WN+ + +P ++ AH++GV V+ F+ D+ +L T S D T K+W
Sbjct: 542 FATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVE-FSPIDQCFL-TCSADGTIKIWSLS 599
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
+C++TLEGH +V F I++ + +G +++W+ T NT ++WA+
Sbjct: 600 DYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWAL 659
Query: 278 GYMKSSRRIVIGYDEGTIM 296
K R + G + ++
Sbjct: 660 SVAKDQERFITGGSDSKLI 678
Score = 188 (71.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 75/294 (25%), Positives = 121/294 (41%)
Query: 44 YQSQTMAKSFEVTEL--PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
Y +T+ + E+ + K++ +VA + I+ Y+ NT + +V H D
Sbjct: 369 YNGKTLERQGEIIGYNDEIIDIKYINDDNIIVA-TNSNEIKTYDLNTK-RAQVLRGHEDL 426
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPK-DTNTFA- 159
+ V V +++S S D +WD EK Q+ GH+ + V K T+ FA
Sbjct: 427 VMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQL-TGHTGVISCVALPKKPSTSMFAI 485
Query: 160 SASLDRTIKIWNLGSPDPNFTLDAHQK-------GVNCVDY--------FTGGDKPYLIT 204
+AS DRTIK+W S + D +K V + + DK + T
Sbjct: 486 TASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFA-T 544
Query: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLE 264
S D K+W+ + +++ H V V F P +T S DGT++IW + Y
Sbjct: 545 ASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCL 604
Query: 265 NTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDNSGKIIWA 317
TL V ++ +IV EG I + I E + + + IWA
Sbjct: 605 KTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWA 658
Score = 178 (67.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 45/160 (28%), Positives = 74/160 (46%)
Query: 97 AHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTN 156
AH I +++ P ++S D +KLW+ T I + H V V F+P D
Sbjct: 525 AHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSI-KAHRRGVWHVEFSPID-Q 582
Query: 157 TFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY 216
F + S D TIKIW+L TL+ H+ V + + G + +++ + + K+W+
Sbjct: 583 CFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQ--IVSVASEGLIKLWNI 640
Query: 217 QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+T C+ T EGH + A+ + ITG D + W
Sbjct: 641 KTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 157 (60.3 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
++ G ++ I+ Y VK+++ H I + +H + V S+S D +K+WD EKG
Sbjct: 102 ILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKG 161
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
+ CT F+ H V + F+P + LD I++++L + + L H ++ +
Sbjct: 162 Y-CTHNFQ-HDDVVTMLKFHPTLLK-LVTVCLDLNIRVYDLVTKEC-VILTNHLSQISGI 217
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
+ G + LI+ D VWD +K+ +T+
Sbjct: 218 TFSNSGKE--LISSGRDKVLNVWDMLSKNPKKTI 249
Score = 37 (18.1 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 778 LQKVNPKAAESLADPEEYSNLFDDWQVAL 806
+Q +NP A+ D E S++ +++ +L
Sbjct: 837 IQSINPAASTLSMDRVETSHIDQNYKKSL 865
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 232 (86.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 75/332 (22%), Positives = 138/332 (41%)
Query: 7 IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFV 66
+ R + + D P + + V +WN++ Q F + V K+
Sbjct: 39 LSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYS 98
Query: 67 ARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + D IR++ K + +AH IR ++ Y+LSSSDD +KLW
Sbjct: 99 PDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLW 158
Query: 127 DWE-KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP---DPNFTLD 182
+ K +MC+ F GH ++V +P D AS S D+T+ +W+L TLD
Sbjct: 159 RLQDKKFMCS--FAGHKNWVRSGVISP-DMRLVASGSDDKTVMLWDLNFQKIVSKYSTLD 215
Query: 183 AHQK--GVNCV-DYFTG-------GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
+ K +N D+ D LI+ S DH K+ D ++ +Q H V
Sbjct: 216 DNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQV 275
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDE 292
+++ HP + + D ++IW R TL + + + + +S G +
Sbjct: 276 NSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQ 335
Query: 293 GTIMV-KIGREEPVASMDNSGKIIWAKHNEIQ 323
MV K ++ + +++ + + N+++
Sbjct: 336 NLCMVWKTNFDQNIQNIEQVQRST-VRQNDVE 366
Score = 219 (82.2 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 61/246 (24%), Positives = 114/246 (46%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
F H D I C P + V S S D ++ +W+++ + F GH V V ++P D
Sbjct: 43 FRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFK-FVGHKGAVYCVKYSP-D 100
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
T AS DR I++W + AH + + + G YL++ SDD T K+W
Sbjct: 101 GETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGG--YLLSSSDDKTLKLW 158
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLEN---TL--NY 269
Q K + + GH + V + P++ ++ +GS+D TV +W ++ + TL N
Sbjct: 159 RLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNV 218
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMD-NSGKII--WAKHN-EIQTV 325
+ ++ + + V+ + +GT ++ + + D S K+I + H+ ++ ++
Sbjct: 219 KISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSI 278
Query: 326 NIKSVG 331
+I G
Sbjct: 279 SIHPTG 284
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 220 (82.5 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 55/193 (28%), Positives = 94/193 (48%)
Query: 72 VVAGADDMFIRVYNYNTMDKV-----KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+++G+ D + ++N ++ + E H+ + + Y LS+S D ++LW
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLW 90
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLDAHQ 185
+ G T+ F GH++ V+ V+F+ D S S DRTIK+WN LG T H
Sbjct: 91 ELSSG-QTTRTFVGHTNDVLSVSFSA-DNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHT 148
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC-VQTLE-GHTHNVSAVCFHPELPI 243
+ V+CV + P +++ D KVW+ SC +QT GHT ++ V P+ +
Sbjct: 149 EWVSCVRFSPNPQNPVIVSAGWDKLVKVWELA--SCRLQTDHIGHTGYINTVTISPDGSL 206
Query: 244 IITGSEDGTVRIW 256
+G +DG +W
Sbjct: 207 CASGGKDGVTMLW 219
Score = 192 (72.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 61/234 (26%), Positives = 105/234 (44%)
Query: 96 EAHTDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWEKGWMC----TQIFEGHSHYVMQVTF 150
E H ++ +A P +LS S D + +W+ + + EGHSH V
Sbjct: 12 EGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVI 71
Query: 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
+ D SAS D+++++W L S T H V V + D +++GS D T
Sbjct: 72 S-SDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSF--SADNRQIVSGSRDRT 128
Query: 211 AKVWDYQTKSCVQTL--EGHTHNVSAVCF--HPELPIIITGSEDGTVRIWHATTYRLENT 266
K+W+ C T+ +GHT VS V F +P+ P+I++ D V++W + RL+
Sbjct: 129 IKLWN-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQT- 186
Query: 267 LNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMD-NSGKIIWAKH 319
+ + GY+ + + I D G++ G++ D N K +++ H
Sbjct: 187 -----DHIGHTGYINT---VTISPD-GSLCASGGKDGVTMLWDLNESKHLYSLH 231
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 56/247 (22%), Positives = 109/247 (44%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
KR L S V + + L++ + ++ +W S ++F V S F A
Sbjct: 56 KRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSA 115
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFE-AHTDYIRCV--AVHPTLPYVLSSSDDMLIK 124
+ +V+G+ D I+++N K + + HT+++ CV + +P P ++S+ D L+K
Sbjct: 116 DNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVK 175
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH 184
+W+ + T GH+ Y+ VT +P D + AS D +W+L ++L A
Sbjct: 176 VWELASCRLQTDHI-GHTGYINTVTISP-DGSLCASGGKDGVTMLWDLNESKHLYSLHAG 233
Query: 185 QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
+ ++ + + Y + + + ++D + KS V L+ PE +
Sbjct: 234 DE-IHALVF---SPNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPEC-VS 288
Query: 245 ITGSEDG 251
+ S DG
Sbjct: 289 LAWSADG 295
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/216 (22%), Positives = 83/216 (38%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELP-----VRSAKFVARKQWVVAGADDMFIRVY 84
+L+ T+ IWN A + L V + + ++ + D +R++
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLW 90
Query: 85 NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHY 144
++ + F HT+ + V+ ++S S D IKLW+ T +GH+ +
Sbjct: 91 ELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEW 150
Query: 145 VMQVTFNPKDTN-TFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
V V F+P N SA D+ +K+W L S H +N V G
Sbjct: 151 VSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGS--LCA 208
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
+G D +WD + +L + A+ F P
Sbjct: 209 SGGKDGVTMLWDLNESKHLYSLHAGDE-IHALVFSP 243
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 223 (83.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 70/297 (23%), Positives = 124/297 (41%)
Query: 4 RLEIKRKLAQRSERVKSVDLH-PSEPWILASL-YSGTVCIWNYQSQTMAKSFEVTELPVR 61
R++++ + R K +H ++ +L S G + IW+ + + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMD-KVKV---FEAHTDYIRCVAVHPTLPYVLSS 117
+ + +V G D +YN T + V+V HT Y+ C +++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTS 160
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D LWD E G T F GH+ VM ++ P DT F S + D + K+W++
Sbjct: 161 SGDTTCALWDIETGQQTTT-FAGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN-----V 232
T H+ +N + +F G+ TGSDD T +++D + Q L ++H+ +
Sbjct: 219 RQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFDLRAD---QELMVYSHDNIICGI 273
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
++V F +++ G +D +W A L RV +G + G
Sbjct: 274 TSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 54/197 (27%), Positives = 89/197 (45%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ Q +V + D +++ T + F HT + +++ P +S + D
Sbjct: 150 RFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASA 208
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
KLWD +G MC Q F GH + + F P N FA+ S D T ++++L + D + +
Sbjct: 209 KLWDVREG-MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA-DQELMVYS 265
Query: 184 HQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
H G+ V + G L+ G DD VWD L GH + VS + +
Sbjct: 266 HDNIICGITSVAFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323
Query: 241 LPIIITGSEDGTVRIWH 257
+ TGS D ++IW+
Sbjct: 324 GMAVATGSWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/250 (23%), Positives = 110/250 (44%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW--- 128
+V+ + D + +++ T +KV + ++ A P+ YV D + +++
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E ++ GH+ Y+ F D N ++S D T +W++ + T H V
Sbjct: 130 EGNVRVSRELAGHTGYLSCCRF--LDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDV 187
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ D ++G+ D +AK+WD + C QT GH +++A+CF P TGS
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245
Query: 249 EDGTVRIWHATTYRLENTLNYGLERV----WAIGYMKSSRRIVIGYDEGTIMV----KIG 300
+D T R++ + + Y + + ++ + KS R ++ GYD+ V K
Sbjct: 246 DDATCRLFDLRAD--QELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 301 REEPVASMDN 310
R +A DN
Sbjct: 304 RAGVLAGHDN 313
>UNIPROTKB|Q5F3D7 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9031 "Gallus gallus" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:AJ851713 IPI:IPI00585633 RefSeq:NP_001012624.1
UniGene:Gga.22725 ProteinModelPortal:Q5F3D7 STRING:Q5F3D7
Ensembl:ENSGALT00000029725 GeneID:426152 KEGG:gga:426152
InParanoid:Q5F3D7 NextBio:20827852 Uniprot:Q5F3D7
Length = 520
Score = 230 (86.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 70/297 (23%), Positives = 129/297 (43%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ +D P P+ A S V I+ SQ K+F + A + + +VAG++
Sbjct: 41 INKIDFSPVPPYNYAVTASSRVHIYGRYSQEPIKTFSRFKDAAYCATYRDDGKLLVAGSE 100
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
+ IR+++ + ++ F+ HT + V + S DD LWD
Sbjct: 101 EGSIRLFDISGRAPLRQFDGHTKAVHVVGFLSDKYRIFSGGDDYSSSLWDIPSATEIVSY 160
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
E HS YV + + + F + S D T+K+++ + T++ H V V F G
Sbjct: 161 SE-HSDYVRCGCASKLNGDVFITGSYDHTVKVFDARTKSSVMTIE-HGHPVESVLLFPSG 218
Query: 198 DKPYLITGSDDHTAKVWDY-QTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L+ + KVWD + + +L+ H V+ +C + +++GS D V+I+
Sbjct: 219 G---LLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVTCLCLNSSGQRLLSGSLDRHVKIY 275
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGK 313
T+Y++ ++ NY + ++ I++G G + VK +P S + S K
Sbjct: 276 STTSYKVVHSFNYATS-ILSLALSPEDETIIVGMTNGVLNVK--HRKPEESKEKSQK 329
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 234 (87.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + ++ S D IK+WD G + + GH V V +
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSL-TGHISTVRGVIVST 255
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ F S D+ +K W+L H V +D D L+T S D TA+
Sbjct: 256 RSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLD--VLVTCSRDSTAR 312
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
+WD +TK+ V TL GHT+ V+ V P IITGS D T+R+W + TL +
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 273 RVWAI 277
V A+
Sbjct: 373 SVRAV 377
Score = 213 (80.0 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 68/310 (21%), Positives = 137/310 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + + P W + T+ IW+ S + S VR R ++ + +
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ ++ + H + + +HPTL +++ S D ++WD +
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWD-VRTKASVHT 324
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH++ V V + + S D TI++W+L + TL H+K V V
Sbjct: 325 LSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH--- 380
Query: 198 DKPYLIT---GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
P L T GS D+ K W + +Q L GH ++ + + + ++++G+++GT+
Sbjct: 381 --PLLYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNAD-GVLVSGADNGTMH 436
Query: 255 IWH-ATTY---RLENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVA 306
+W T Y R+ + G L+ ++A + +S R++ + TI K+ RE+ A
Sbjct: 437 LWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTI--KVYREDETA 494
Query: 307 SMDNSGKIIW 316
+ + + + W
Sbjct: 495 T-EETHPVSW 503
Score = 210 (79.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 50/168 (29%), Positives = 74/168 (44%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W ++ GH +V + P + F + S DRTIKIW+L S +L H
Sbjct: 189 WHPPWKLYRVISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHIST 247
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V T PYL + +D K WD + ++ GH V + HP L +++T
Sbjct: 248 VRGVIVSTRS--PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTC 305
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
S D T RIW T +TL+ V + + +I+ G + TI
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 353
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 62/273 (22%), Positives = 108/273 (39%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
++K L V+ V + P++ + V W+ + + + + V
Sbjct: 236 KLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDL 295
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+V + D R+++ T V HT+ + V P +++ S D I+L
Sbjct: 296 HPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 355
Query: 126 WDWEKGWMCTQI-FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLD 182
WD G T++ H V V +P TFAS S D IK W PD F L
Sbjct: 356 WDLVAGK--TRVTLTNHKKSVRAVVLHPL-LYTFASGSPDN-IKQWKF--PDGGFIQNLS 409
Query: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT-------KSCVQ--TLEGHTHNVS 233
H +N + G L++G+D+ T +WD++T + VQ +L+ + +
Sbjct: 410 GHNAIINTLAVNADG---VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSES-GIF 465
Query: 234 AVCFHPELPIIITGSEDGTVRIWHATTYRLENT 266
A F ++T D T++++ E T
Sbjct: 466 ACAFDRSESRLLTAEADKTIKVYREDETATEET 498
Score = 42 (19.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 444 SNDFICFYDWAECRLIR-RIDVTVKNLYWAD 473
S F C +D +E RL+ D T+K +Y D
Sbjct: 462 SGIFACAFDRSESRLLTAEADKTIK-VYRED 491
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 234 (87.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + ++ S D IK+WD G + + GH V V +
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSL-TGHISTVRGVIVST 256
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ F S D+ +K W+L H V +D D L+T S D TA+
Sbjct: 257 RSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTAR 313
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
+WD +TK+ V TL GHT+ V+ V P IITGS D T+R+W + TL +
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 273 RVWAI 277
V A+
Sbjct: 374 SVRAV 378
Score = 208 (78.3 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 49/168 (29%), Positives = 74/168 (44%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W ++ GH +V + P + F + S DRTIKIW+L S +L H
Sbjct: 190 WHPPWKLYRVISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHIST 248
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V T PYL + +D K WD + ++ GH V + HP + +++T
Sbjct: 249 VRGVIVSTRS--PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 306
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
S D T RIW T +TL+ V + + +I+ G + TI
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTI 354
Score = 207 (77.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 65/308 (21%), Positives = 136/308 (44%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + + P W + T+ IW+ S + S VR R ++ + +
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ ++ + H + + +HPT+ +++ S D ++WD +
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWD-VRTKASVHT 325
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH++ V V + + S D TI++W+L + TL H+K V V
Sbjct: 326 LSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHP-- 382
Query: 198 DKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Y +GS D+ K W + +Q L GH ++ + + + ++++G+++GT+ +W
Sbjct: 383 -LHYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNTD-GVLVSGADNGTMHLW 439
Query: 257 H-ATTY---RLENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASM 308
T Y R+ + G L+ ++A + +S R++ + TI K+ RE+ A+
Sbjct: 440 DWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTI--KVYREDETAT- 496
Query: 309 DNSGKIIW 316
+ + + W
Sbjct: 497 EETHPVSW 504
Score = 42 (19.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 444 SNDFICFYDWAECRLIR-RIDVTVKNLYWAD 473
S F C +D +E RL+ D T+K +Y D
Sbjct: 463 SGIFACAFDRSESRLLTAEADKTIK-VYRED 492
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 232 (86.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 58/185 (31%), Positives = 88/185 (47%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + ++ S D IK+WD G + + GH V V +
Sbjct: 200 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSL-TGHISTVRGVIVSA 258
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
+ F S D+ +K W+L H V +D D L+T S D TA+
Sbjct: 259 RSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTAR 315
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLE 272
+WD +TK+ V TL GHT+ V+ V P ++TGS D T+R+W + TL +
Sbjct: 316 IWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKK 375
Query: 273 RVWAI 277
V A+
Sbjct: 376 SVRAV 380
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 66/308 (21%), Positives = 139/308 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+ + + P W + T+ IW+ S + S VR AR ++ + +
Sbjct: 209 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGE 268
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ ++ + H + + +HPT+ +++ S D ++WD +
Sbjct: 269 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWD-VRTKASVHT 327
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH++ V V + + S D TI++W+L + TL H+K V V
Sbjct: 328 LSGHTNAVATVKCQAAEPQV-VTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHP-- 384
Query: 198 DKPYLI-TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ Y +GS D+ K W + + +Q L GH ++ + + + ++++G+++GT+ +W
Sbjct: 385 -RHYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLTVNSD-GVLVSGADNGTMHLW 441
Query: 257 H-ATTY---RLENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASM 308
T Y R+ + G L+ ++A + +S R++ + TI K+ +E+ A+
Sbjct: 442 DWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTI--KVYKEDDTAT- 498
Query: 309 DNSGKIIW 316
+ + I W
Sbjct: 499 EETHPISW 506
Score = 209 (78.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 48/168 (28%), Positives = 73/168 (43%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W ++ GH +V + P + F + S DRTIKIW+L S +L H
Sbjct: 192 WHPPWKLYRVISGHLGWVRCIAVEPGN-QWFVTGSADRTIKIWDLASGKLKLSLTGHIST 250
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V PYL + +D K WD + ++ GH V + HP + +++T
Sbjct: 251 VRGV--IVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTC 308
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
S D T RIW T +TL+ V + + ++V G + TI
Sbjct: 309 SRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTI 356
Score = 44 (20.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 444 SNDFICFYDWAECRLIR-RIDVTVKNLYWAD 473
S F C +D +E RL+ D T+K +Y D
Sbjct: 465 SGIFACVFDQSESRLLTAEADKTIK-VYKED 494
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 70/265 (26%), Positives = 116/265 (43%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP---VR 61
++ +R L +V +D + I++S G V +W+ S T K VT +P V
Sbjct: 95 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWD--SFTTNKEHAVT-MPCTWVM 151
Query: 62 SAKFVARKQWVVAGADDMFIRVY------NYNTMDKVKVFEAHTDYIR-CVAVHPTLPYV 114
+ + + G D VY N N K K HT+Y+ C + + +
Sbjct: 152 ACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQI 211
Query: 115 LSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT-NTFASASLDRTIKIWNLG 173
L++S D LWD E G + Q F GH V+ + P +T NTF S D+ +W++
Sbjct: 212 LTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 270
Query: 174 SPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT--KSCVQTLEGHTHN 231
S + H+ +N V Y+ GD +GSDD T +++D + + + + E
Sbjct: 271 SGQCIQAFETHESDINSVRYYPSGDA--FASGSDDATCRLYDLRADREVAIYSKESIIFG 328
Query: 232 VSAVCFHPELPIIITGSEDGTVRIW 256
S+V F ++ G D T+ +W
Sbjct: 329 ASSVDFSLSGRLLFAGYNDYTINVW 353
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSDDMLIKLWD 127
Q ++ + D +++ + ++ F H + C+ + P T +S D +WD
Sbjct: 209 QQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWD 268
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK- 186
G C Q FE H + V + P + FAS S D T ++++L + D + + +
Sbjct: 269 MRSG-QCIQAFETHESDINSVRYYPSG-DAFASGSDDATCRLYDLRA-DREVAIYSKESI 325
Query: 187 --GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244
G + VD+ G L G +D+T VWD S V L GH + VS + P+
Sbjct: 326 IFGASSVDFSLSGR--LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAF 383
Query: 245 ITGSEDGTVRIW 256
+GS D T+R+W
Sbjct: 384 CSGSWDHTLRVW 395
Score = 166 (63.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
H++Y+ +F D +AS D T +W++ S + H V C+D
Sbjct: 194 HTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 253
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
++G D A VWD ++ C+Q E H ++++V ++P +GS+D T R++
Sbjct: 254 TFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRA 313
Query: 261 YRLENTLNYGLERVW----AIGYMKSSRRIVIGYDEGTIMV 297
R E + Y E + ++ + S R + GY++ TI V
Sbjct: 314 DR-EVAI-YSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 352
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 18 VKSVDLHPSEPW--ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
V +DL PSE ++ +W+ +S ++FE E + S ++ +G
Sbjct: 241 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASG 300
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP--YVLSSSDDMLIKLWDWEKGWM 133
+DD R+Y+ +V ++ + +V +L + + +D I +WD KG
Sbjct: 301 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 360
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
+ +F GH + V + +P D F S S D T+++W
Sbjct: 361 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 395
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 229 (85.7 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 54/189 (28%), Positives = 93/189 (49%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+G+ D R+++ +T + + HT ++ V+ P + + S D +++WD +KG
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKG 223
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNT-----FASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+GH ++ + + P ASAS D T++IW++ S + L H+
Sbjct: 224 QALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKG 283
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V CV + G K Y T S D T KVW+ QT + +QTL H H V+ + + I+ T
Sbjct: 284 SVTCVRW-GGTGKIY--TSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDF-ILRT 339
Query: 247 GSEDGTVRI 255
D T ++
Sbjct: 340 AYHDHTGKV 348
Score = 198 (74.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 70/235 (29%), Positives = 106/235 (45%)
Query: 30 ILASLYSGTVCIWNYQSQTM-----AKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVY 84
I S + T+ +WN Q+ T+ A + V L + S F+ R + D +V
Sbjct: 296 IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLAL-STDFILRTAY-----HDHTGKVP 349
Query: 85 NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHY 144
+ DKV + + + + + + ++S+SDD + LWD E GH
Sbjct: 350 ESDA-DKVAMAKKRFEKAATIN-NKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKE 407
Query: 145 VMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGV-NCVDYFTGGDKPY 201
V VTF+P D ASA D +K+WN D F TL H V C F+ D
Sbjct: 408 VNHVTFSP-DMAYIASAGFDNHVKLWN--GRDGKFITTLRGHVGAVYQCC--FSA-DSRL 461
Query: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L++ S D T KVW+ +T + L GH V AV + P+ + +G +D +RIW
Sbjct: 462 LVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 57/230 (24%), Positives = 105/230 (45%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS-DDMLIKL--WDW 128
+ + D I+V+N T ++ AH + +A+ + ++L ++ D K+ D
Sbjct: 296 IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLAL--STDFILRTAYHDHTGKVPESDA 353
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQKG 187
+K M + FE T N K SAS D T+ +W+ S P L HQK
Sbjct: 354 DKVAMAKKRFE------KAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKE 407
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
VN V + D Y+ + D+ K+W+ + + TL GH V CF + ++++
Sbjct: 408 VNHVTF--SPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSS 465
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
S+D T+++W+ T +L L + V+A+ + +++ G + I +
Sbjct: 466 SKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRI 515
Score = 177 (67.4 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 42/142 (29%), Positives = 70/142 (49%)
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
C+ GH ++ +F+P ++T S S D T +IW+ + P TL H V V Y
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSY 199
Query: 194 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQT-LEGHTHNVSAVCFHP-EL-----PIIIT 246
G + TGS D+T ++WD + + L+GH ++++ + P L P + +
Sbjct: 200 SPNG--AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 247 GSEDGTVRIWHATTYRLENTLN 268
S+D TVRIW + R + L+
Sbjct: 258 ASKDSTVRIWDVISKRADIVLS 279
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 248 (92.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 62/225 (27%), Positives = 98/225 (43%)
Query: 39 VCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAH 98
V +W+ T S PV S F + + V+AGA I++++ V+ F H
Sbjct: 40 VNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGH 99
Query: 99 TDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTF 158
V HP ++ S S D +++WD K C Q ++GH+ + + F+P D
Sbjct: 100 RSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG-CIQTYKGHTRGISTIEFSP-DGRWV 157
Query: 159 ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
S LD +K+W+L + H+ + +D+ + L TGS D T K WD +T
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL--EFLLATGSADRTVKFWDLET 215
Query: 219 KSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGT-VRIWHATTYR 262
+ T V A+ FHP+ + G +DG V W R
Sbjct: 216 FELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICR 260
Score = 240 (89.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 66/263 (25%), Positives = 114/263 (43%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
++ G DD + +++ HT + VA + VL+ + +IKLWD E+
Sbjct: 31 LLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEES 90
Query: 132 WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
M + F GH V F+P AS S D +++W+ T H +G++ +
Sbjct: 91 KM-VRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTI 148
Query: 192 DYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDG 251
++ G ++++G D+ KVWD + + H + ++ FHP ++ TGS D
Sbjct: 149 EFSPDGR--WVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADR 206
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNS 311
TV+ W T+ L T V AI + + + G D+G +K+ EPV D
Sbjct: 207 TVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG---LKVYSWEPVICRDGV 263
Query: 312 GKIIWAKHNEIQTVNIKSVGADY 334
+ W+ + K +G Y
Sbjct: 264 D-MGWSTLGDFCINEGKFIGCSY 285
Score = 232 (86.7 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 51/174 (29%), Positives = 87/174 (50%)
Query: 91 KVKVFEAHTDYIRCVAV-HPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVT 149
K++ F AH+ + C+++ T +L+ DD + LW K + GH+ V V
Sbjct: 7 KLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLC-GHTSPVDSVA 65
Query: 150 FNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
FN ++ A AS IK+W+L H+ + V++ G+ +L +GS D
Sbjct: 66 FNSEEVLVLAGAS-SGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE--FLASGSSDT 122
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+VWD + K C+QT +GHT +S + F P+ +++G D V++W T +L
Sbjct: 123 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL 176
Score = 191 (72.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 59/254 (23%), Positives = 111/254 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + V SV + E +LA SG + +W+ + M ++F + +F +
Sbjct: 54 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
++ +G+ D +RV++ ++ ++ HT I + P +V+S D ++K+WD
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 173
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G + + F+ H + + F+P + A+ S DRT+K W+L + + T GV
Sbjct: 174 GKLLHE-FKCHEGPIRSLDFHPLEF-LLATGSADRTVKFWDLETFELIGTTRPEATGVRA 231
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
+ + G L G DD KV+ ++ C ++ + C + E I
Sbjct: 232 IAFHPDGQT--LFCGLDDGL-KVYSWEPVICRDGVDMGWSTLGDFCIN-EGKFIGCSYYR 287
Query: 251 GTVRIWHATTYRLE 264
+V IW + LE
Sbjct: 288 NSVGIWVSDISELE 301
Score = 37 (18.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 771 VAIWRKDLQKVNPKAAES 788
V IW D+ ++ P A S
Sbjct: 290 VGIWVSDISELEPYGAVS 307
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 56/164 (34%), Positives = 79/164 (48%)
Query: 93 KVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152
+V H ++RC+AV P + + + D +IK+WD G + + GH V V +
Sbjct: 166 RVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSL-TGHVSTVRGVAVST 224
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
K F S DR +K W+L H V + D L T D TA+
Sbjct: 225 KHPYLF-SCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTID--VLATSGRDSTAR 281
Query: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+WD +TK+ V TL GHT+ V++V P IITGS D TVR+W
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLW 325
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/227 (26%), Positives = 100/227 (44%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKV-FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
+W GA D I++++ + K+K+ H +R VAV PY+ S +D +K WD
Sbjct: 185 EWFATGAGDRVIKIWDLAS-GKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDL 243
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
E + + GH V + +P + A++ D T +IW++ + TL H V
Sbjct: 244 EYNKVIRH-YHGHLSAVYSLALHPT-IDVLATSGRDSTARIWDMRTKANVHTLTGHTNTV 301
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
V P +ITGS D T ++WD V TL H +V ++ HP L + + S
Sbjct: 302 ASV--VAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASAS 359
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
D ++ W + ++ G + S +V G D GT+
Sbjct: 360 PDN-IKQWRCPEGKFVQNIS-GHTSIVNCMAANSEGVLVSGGDNGTM 404
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 49/189 (25%), Positives = 84/189 (44%)
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
W W +++ GH +V + P + FA+ + DR IKIW+L S +L H
Sbjct: 158 WHAPWKLSRVISGHLGWVRCIAVEPGN-EWFATGAGDRVIKIWDLASGKLKLSLTGHVST 216
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V T PYL + +D K WD + ++ GH V ++ HP + ++ T
Sbjct: 217 VRGVAVST--KHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATS 274
Query: 248 SEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVA 306
D T RIW T +TL V ++ ++ +I+ G + T+ + + + V
Sbjct: 275 GRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVC 334
Query: 307 SMDNSGKII 315
++ N K +
Sbjct: 335 TLTNHKKSV 343
Score = 177 (67.4 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 59/262 (22%), Positives = 102/262 (38%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
++K L V+ V + P++ + V W+ + + + + V S
Sbjct: 205 KLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLAL 264
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ D R+++ T V HT+ + V T P +++ S D ++L
Sbjct: 265 HPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRL 324
Query: 126 WDWEKGW-MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LD 182
WD G +CT H V + +P FASAS D IK W P+ F +
Sbjct: 325 WDLAAGKSVCT--LTNHKKSVRSIVLHPS-LYMFASASPDN-IKQWRC--PEGKFVQNIS 378
Query: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTH--------NVSA 234
H VNC+ + L++G D+ T WD++T Q + + A
Sbjct: 379 GHTSIVNCM---AANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFA 435
Query: 235 VCFHPELPIIITGSEDGTVRIW 256
+CF +IT D T++++
Sbjct: 436 MCFDQSGSRLITAEADKTIKVY 457
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 53/194 (27%), Positives = 95/194 (48%)
Query: 106 AVHPT-LPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
AV PT ++LSSS D I+LW + W C +++GH V + + P + F S D
Sbjct: 325 AVAPTNARWLLSSSADRTIRLWSLDL-WQCMVVYKGHDQPVWDLQWGPFG-HYFVSGGHD 382
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
+T ++W H++ V+CV + + Y+ TGS D T ++W T + V+
Sbjct: 383 KTARLWVTDHIRQQRIFVGHEQDVDCVCFHP--NSAYVFTGSSDRTVRMWAVTTGNAVRM 440
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN-YGLERVWAIGYMKSS 283
GHT N++A+ + + + + G++ +W RL + +G +W++ + S
Sbjct: 441 FTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVES 500
Query: 284 RRIVIGYDEGTIMV 297
+V G +GT+ V
Sbjct: 501 NVLVSGGADGTVRV 514
Score = 188 (71.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 59/207 (28%), Positives = 89/207 (42%)
Query: 140 GHSHYVMQVTFNPKDT---NTFA--------SASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
GHS V V F P T N A S+S DRTI++W+L H + V
Sbjct: 305 GHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPV 364
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ + G Y ++G D TA++W + GH +V VCFHP + TGS
Sbjct: 365 WDLQWGPFGH--YFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGS 422
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVAS 307
D TVR+W TT + A+ + + + D G+I++ +G +
Sbjct: 423 SDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKR 482
Query: 308 MDNSGKI-IWAKHNEIQTVNIKSVGAD 333
M GK IW+ +++ + S GAD
Sbjct: 483 MRGHGKGGIWSLSWSVESNVLVSGGAD 509
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/187 (24%), Positives = 84/187 (44%)
Query: 29 WILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
W+L+S T+ +W+ ++ + PV ++ + V+G D R++ +
Sbjct: 333 WLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDH 392
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
+ + ++F H + CV HP YV + S D +++W G ++F GH+ + +
Sbjct: 393 IRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTG-NAVRMFTGHTGNITAL 451
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
+ +D T ASA +I +W+LG + H KG + L++G D
Sbjct: 452 ACS-RDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKG-GIWSLSWSVESNVLVSGGAD 509
Query: 209 HTAKVWD 215
T +VWD
Sbjct: 510 GTVRVWD 516
Score = 173 (66.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/209 (22%), Positives = 94/209 (44%)
Query: 50 AKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP 109
A +F + P +A +W+++ + D IR+++ + + V++ H + + P
Sbjct: 312 AVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGP 371
Query: 110 TLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKI 169
Y +S D +LW + +IF GH V V F+P F +S DRT+++
Sbjct: 372 FGHYFVSGGHDKTARLWVTDHIRQ-QRIFVGHEQDVDCVCFHPNSAYVFTGSS-DRTVRM 429
Query: 170 WNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDH-TAKVWDYQTKSCVQTLEGH 228
W + + + H + + G + +DDH + +WD ++ + GH
Sbjct: 430 WAVTTGNAVRMFTGHTGNITALACSRDGKT---LASADDHGSILLWDLGPGRLLKRMRGH 486
Query: 229 THN-VSAVCFHPELPIIITGSEDGTVRIW 256
+ ++ + E ++++G DGTVR+W
Sbjct: 487 GKGGIWSLSWSVESNVLVSGGADGTVRVW 515
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 221 (82.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/212 (30%), Positives = 98/212 (46%)
Query: 97 AHTDYIRC--VAVHPTLPYVLSSSDDMLIKLWDWE-KGWMCTQIF-EGHSHYVMQVTFNP 152
AH D RC +A +PT + S D I++W E W+C + EGH V +V ++P
Sbjct: 13 AHPDS-RCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP 71
Query: 153 KDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHT 210
N ASAS D T IW D TL+ H+ V V + G+ L T S D +
Sbjct: 72 CG-NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKS 128
Query: 211 AKVWDYQTKS---CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH--ATTYRLEN 265
VW+ + CV L HT +V V +HP ++ + S D TV+++ +
Sbjct: 129 VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCA 188
Query: 266 TLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
TL VW+I + S +R+ D+ T+ +
Sbjct: 189 TLEGHESTVWSIAFDPSGQRLASCSDDRTVRI 220
Score = 182 (69.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 59/218 (27%), Positives = 99/218 (45%)
Query: 8 KRKLAQRSER-VKSVDLHPSEPWILASLYSGTVCIW--NYQSQTMAKSFEVTELPVRSAK 64
K L++ +R V+ V P ++ ++ + T CIW N + E E V+S
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDK---VKVFEAHTDYIRCVAVHPTLPYVLSSSDDM 121
+ + + D + V+ + D+ V V +HT ++ V HP+ + S+S D
Sbjct: 113 WAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172
Query: 122 LIKLWDWEKG--WMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
+KL+ E+G W+C EGH V + F+P AS S DRT++IW P
Sbjct: 173 TVKLYQ-EEGDDWVCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQYLP---- 226
Query: 180 TLDAHQKGVNCVDYFTGGDKPY--LITGSDDHTAKVWD 215
+++GV C +G D + + T S HT ++D
Sbjct: 227 ---GNEQGVAC----SGSDPSWKCVCTLSGFHTRTIYD 257
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/167 (29%), Positives = 77/167 (46%)
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG-WMCTQIFEGHSHYVMQVTFNPKD 154
E H +R VA P Y+ S+S D +W + + C EGH + V V + P
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG 117
Query: 155 TNTFASASLDRTIKIWNLGSPDPN---FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
N A+ S D+++ +W + D L++H + V V + + L + S D T
Sbjct: 118 -NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE--LLASASYDDTV 174
Query: 212 KVWDYQTKS--CVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
K++ + C TLEGH V ++ F P + + S+D TVRIW
Sbjct: 175 KLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 55 (24.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 226 EGHTHNVSAVCFHP-ELPIIITGSEDGTVRIW 256
+ H+ +V+ V ++P E ++ + S+DG V W
Sbjct: 300 QAHSQDVNCVAWNPKEAGLLASCSDDGEVAFW 331
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 216 (81.1 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 61/253 (24%), Positives = 113/253 (44%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
RLE++ L V SVD+ PS + +S + +W+ +S ++ + + S
Sbjct: 53 RLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSV 112
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
F Q + G+ + ++ T K + +I +A P Y+ S + D +I
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDA 183
++D G + + EGH+ + +TF+P D+ +AS D IKI+ + TL
Sbjct: 173 NIFDIATGKLLHTL-EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYEVQHASLAATLSG 230
Query: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPI 243
H V V + D + ++ S D + KVWD ++CV T H V V ++
Sbjct: 231 HGSWVLNVAF--SPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSK 288
Query: 244 IITGSEDGTVRIW 256
I++ ++D + ++
Sbjct: 289 IVSVADDQEIHVY 301
Score = 193 (73.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 62/274 (22%), Positives = 121/274 (44%)
Query: 26 SEPWILASLYSGTVCIWNYQSQTMA--KSFEVTELPVRSAKFVARKQWVVAGADDMFIRV 83
SE I SL V +W + + + + E +L V S + + + D IR+
Sbjct: 32 SELVISGSL-DDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRL 90
Query: 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSH 143
++ + +++ +A VA P ++ + S + ++ E G + +
Sbjct: 91 WDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSL-DTRGK 149
Query: 144 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
+++ + ++P D AS ++D I I+++ + TL+ H + + + D L+
Sbjct: 150 FILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLV 206
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
T SDD K+++ Q S TL GH V V F P+ ++ S D +V++W +
Sbjct: 207 TASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTC 266
Query: 264 ENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+T ++VW + Y K+ +IV D+ I V
Sbjct: 267 VHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHV 300
Score = 171 (65.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 66/271 (24%), Positives = 116/271 (42%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQ-IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
V+S S D L+K+W W + Q EGH V+ V +P N AS+SLD I++W+L
Sbjct: 35 VISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSG-NIMASSSLDAHIRLWDL 93
Query: 173 GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
S +DA V + D +L TGS ++ +T +L+ +
Sbjct: 94 ESGKQIRAIDAGPVDAWSVAF--SPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFI 151
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDE 292
++ + P+ + +G+ DG + I+ T +L +TL + ++ + S+ +V D+
Sbjct: 152 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD 211
Query: 293 GTIMV-KIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGAD--YEVTDGERLPLAVKEL 349
G I + ++ A++ G + + S +D +V D L
Sbjct: 212 GYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFL 271
Query: 350 GTCDLYPQSLKHNPNG-RFVVVCGDGEYIIY 379
D +K+N NG + V V D E +Y
Sbjct: 272 DHQDQV-WGVKYNKNGSKIVSVADDQEIHVY 301
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/161 (23%), Positives = 71/161 (44%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L R + + S+ P ++ + G + I++ + + + E +P+RS F Q
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+V +DD +I++Y H ++ VA P + +SSS D +K+WD
Sbjct: 204 LLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWD-VS 262
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
C F H V V +N K+ + S + D+ I +++
Sbjct: 263 ARTCVHTFLDHQDQVWGVKYN-KNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 222 (83.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 64/251 (25%), Positives = 115/251 (45%)
Query: 24 HPSEPWILASLYSGTVCIWN-YQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82
HP+ + ++ + + +WN Y + + V + + + + D +
Sbjct: 75 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 83 VYNYNTMDKVKVFEAHTDYIR-CVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGH 141
V++ T ++VK + HT ++ C V + SDD +KLWD K Q F+ +
Sbjct: 135 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ-N 192
Query: 142 SHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
++ V+ VTFN DT+ S +D IK+W+L +T+ H V + + G
Sbjct: 193 TYQVLAVTFN--DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS-- 248
Query: 201 YLITGSDDHTAKVWDYQT----KSCVQTLEGHTHNVSAV---C-FHPELPIIITGSEDGT 252
YL++ + D+T +VWD + + CV+ +G+ HN C + P+ I GS D
Sbjct: 249 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 308
Query: 253 VRIWHATTYRL 263
V +W T+ R+
Sbjct: 309 VYVWDTTSRRI 319
Score = 219 (82.2 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 64/232 (27%), Positives = 104/232 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
+ + H + C HP + S+ D LI LW+ +GHS VM++ +N
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN-CVDYFTGGDKPYLI-TGSDDH 209
+ F SAS D+T+ +W+ + + L H VN C G P L+ TGSDD
Sbjct: 119 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG---PQLVCTGSDDG 174
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T K+WD + K+ +QT + +T+ V AV F+ II+G D +++W +L T+
Sbjct: 175 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 233
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAK-HN 320
+ V + ++ + T V++ P A + KI HN
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNT--VRVWDVRPFAPKERCVKIFQGNVHN 283
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/221 (24%), Positives = 104/221 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARK--QWVVAGADDMFIRVYNYNTMDKVKVF 95
TV +W+ ++ K + V S + AR+ Q V G+DD +++++ ++ F
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 190
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ +T + V + T ++S D IK+WD + + T GH+ V ++ + + +
Sbjct: 191 Q-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL-TYTMRGHADSVTGLSLSSEGS 248
Query: 156 NTFASASLDRTIKIWNLGSPDPN------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
++A +D T+++W++ P F + H N + D + GS D
Sbjct: 249 YLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADR 307
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
VWD ++ + L GH +++ V FHP+ PIII+ S D
Sbjct: 308 FVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/199 (23%), Positives = 87/199 (43%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYN-YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
V KF + + D I ++N Y D + H+ + + + + S+S
Sbjct: 69 VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSAS 128
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +WD E G ++ +GH+ +V + + S D T+K+W++
Sbjct: 129 TDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 187
Query: 179 FTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
T + +Q V V + D+ +I+G D+ KVWD + T+ GH +V+ +
Sbjct: 188 QTFQNTYQ--VLAVTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 243
Query: 238 HPELPIIITGSEDGTVRIW 256
E +++ + D TVR+W
Sbjct: 244 SSEGSYLLSNAMDNTVRVW 262
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 218 (81.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 66/227 (29%), Positives = 101/227 (44%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+W + G +D N + K K F+ H+ ++ V + Y LS+S D ++LWD E
Sbjct: 44 KWKLTGGED------NQYGIPK-KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLE 96
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLDAHQKGV 188
G TQ F GH V+ V+ K+ SAS D+T+K+WN +G + TL H V
Sbjct: 97 TG-ETTQRFVGHKGDVLSVSI-AKNLRQIVSASRDKTVKVWNTIG--ECMATLTGHNDWV 152
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ V +I+ S D T K WD S GHT +S + P+ + +
Sbjct: 153 SAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAG 212
Query: 249 EDGTVRIW----HATTYRLE-----NTLNYGLERVWAIGYMKSSRRI 286
+DG + +W + T Y LE + L + R W S +I
Sbjct: 213 KDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRYWLAAATTSGIKI 259
Score = 171 (65.3 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 51 KSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT 110
KSF+ V+ A + ++ + D +R+++ T + + F H + V++
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 111 LPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD-TNTFASASLDRTIKI 169
L ++S+S D +K+W+ M T GH+ +V V +P D ++T SAS D+T+K
Sbjct: 120 LRQIVSASRDKTVKVWNTIGECMAT--LTGHNDWVSAVRISPSDQSSTVISASWDKTVKS 177
Query: 170 WNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
W+L N H ++C+ G + D +WD + TLE
Sbjct: 178 WDLADYSVNADFIGHTGYISCITLSPDGS--LCASAGKDGVIILWDLNKNKTLYTLEAKA 235
Query: 230 HNVSAVCFHP 239
V A+ F P
Sbjct: 236 E-VHALAFSP 244
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQ-KGVNCV--DYF 194
EGH+ +V + P + S S D+T+ W L G D + + KG + + D
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVT 73
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
D Y ++ S D T ++WD +T Q GH +V +V L I++ S D TV+
Sbjct: 74 ISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVK 133
Query: 255 IWH 257
+W+
Sbjct: 134 VWN 136
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 218 (81.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 66/227 (29%), Positives = 101/227 (44%)
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+W + G +D N + K K F+ H+ ++ V + Y LS+S D ++LWD E
Sbjct: 44 KWKLTGGED------NQYGIPK-KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLE 96
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLDAHQKGV 188
G TQ F GH V+ V+ K+ SAS D+T+K+WN +G + TL H V
Sbjct: 97 TG-ETTQRFVGHKGDVLSVSI-AKNLRQIVSASRDKTVKVWNTIG--ECMATLTGHNDWV 152
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ V +I+ S D T K WD S GHT +S + P+ + +
Sbjct: 153 SAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAG 212
Query: 249 EDGTVRIW----HATTYRLE-----NTLNYGLERVWAIGYMKSSRRI 286
+DG + +W + T Y LE + L + R W S +I
Sbjct: 213 KDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRYWLAAATTSGIKI 259
Score = 171 (65.3 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 51 KSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT 110
KSF+ V+ A + ++ + D +R+++ T + + F H + V++
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 111 LPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD-TNTFASASLDRTIKI 169
L ++S+S D +K+W+ M T GH+ +V V +P D ++T SAS D+T+K
Sbjct: 120 LRQIVSASRDKTVKVWNTIGECMAT--LTGHNDWVSAVRISPSDQSSTVISASWDKTVKS 177
Query: 170 WNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
W+L N H ++C+ G + D +WD + TLE
Sbjct: 178 WDLADYSVNADFIGHTGYISCITLSPDGS--LCASAGKDGVIILWDLNKNKTLYTLEAKA 235
Query: 230 HNVSAVCFHP 239
V A+ F P
Sbjct: 236 E-VHALAFSP 244
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFTLDAHQ-KGVNCV--DYF 194
EGH+ +V + P + S S D+T+ W L G D + + KG + + D
Sbjct: 14 EGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVT 73
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
D Y ++ S D T ++WD +T Q GH +V +V L I++ S D TV+
Sbjct: 74 ISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVK 133
Query: 255 IWH 257
+W+
Sbjct: 134 VWN 136
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 224 (83.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+W + W ++ GH +V + P D FAS + DRTIKIW+L S TL H
Sbjct: 186 EWHRPWKLMRVISGHLGWVRALAVEP-DNKWFASGAGDRTIKIWDLASGRLRLTLTGHIS 244
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT 246
V + PYL + ++D K WD +T ++ GH V + HP L +++T
Sbjct: 245 TVRGLA--VSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVT 302
Query: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
G DG R+W T + L+ V + ++ +++ G + T+
Sbjct: 303 GGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTV 351
Score = 222 (83.2 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 58/187 (31%), Positives = 89/187 (47%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
++V H ++R +AV P + S + D IK+WD G + + GH V + +
Sbjct: 194 MRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTL-TGHISTVRGLAVS 252
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
P+ F+ A D+ +K W+L + H GV + D L+TG D A
Sbjct: 253 PRHPYLFSCAE-DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLD--VLVTGGRDGVA 309
Query: 212 KVWDYQTKSCVQTLEGHTHNVSA-VCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
+VWD +T+S + L GHT VS VC + P +ITGS D TVR+W + L +
Sbjct: 310 RVWDMRTRSNIHVLSGHTGTVSELVCQEAD-PQVITGSLDSTVRMWDLAAGKTMGVLTHH 368
Query: 271 LERVWAI 277
+ V A+
Sbjct: 369 KKGVRAL 375
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 64/298 (21%), Positives = 135/298 (45%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+++ + P W + T+ IW+ S + + VR R ++ + A+
Sbjct: 204 VRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAE 263
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D ++ ++ T ++ + H + +A+HPTL +++ D + ++WD +
Sbjct: 264 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTR-SNIHV 322
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
GH+ V ++ D + SLD T+++W+L + L H+KGV + T
Sbjct: 323 LSGHTGTVSELVCQEADPQVI-TGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALA--THP 379
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ +GS + K W + +Q EGH ++ + + + + +G+++G++ W
Sbjct: 380 TEFTFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVNDQ-NVFFSGADNGSMSFWD 437
Query: 258 -ATTYR---LENTLNYG-LER---VWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVAS 307
T +R L+ T G L+ ++ + +S R++ G + TI KI +E+ A+
Sbjct: 438 WKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTI--KIWKEDMEAT 493
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 46/215 (21%), Positives = 88/215 (40%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V ++ LHP+ ++ G +W+ ++++ V V+ G+
Sbjct: 288 VYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSL 347
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V H +R +A HPT + +S IK W +G Q
Sbjct: 348 DSTVRMWDLAAGKTMGVLTHHKKGVRALATHPT-EFTFASGSAGSIKQWKCPEGAFM-QN 405
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH--------QKGVN 189
FEGH+ + ++ N D N F S + + ++ W+ + +LD + G+
Sbjct: 406 FEGHNSIINTLSVN--DQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIF 463
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
+ G + LI G D T K+W ++ +T
Sbjct: 464 TSTFDQSGSR--LICGEADKTIKIWKEDMEATPET 496
Score = 50 (22.7 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 17/83 (20%), Positives = 32/83 (38%)
Query: 394 EFVWSSDGEYAVREXXXXXXXXXXNFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDW 453
EF ++S ++++ NF+ S+ T S + N + F+DW
Sbjct: 381 EFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTLSVND--QNVFFSGADNGSMSFWDW 438
Query: 454 AECRLIRRIDVTVK-NLYWADSG 475
+ +D T + A+SG
Sbjct: 439 KTGHRFQSLDTTAQPGSLQAESG 461
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 222 (83.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 64/251 (25%), Positives = 115/251 (45%)
Query: 24 HPSEPWILASLYSGTVCIWN-YQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82
HP+ + ++ + + +WN Y + + V + + + + D +
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 83 VYNYNTMDKVKVFEAHTDYIR-CVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGH 141
V++ T ++VK + HT ++ C V + SDD +KLWD K Q F+ +
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAVQTFQ-N 193
Query: 142 SHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
++ V+ VTFN DT+ S +D IK+W+L +T+ H V + + G
Sbjct: 194 TYQVLAVTFN--DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS-- 249
Query: 201 YLITGSDDHTAKVWDYQT----KSCVQTLEGHTHNVSAV---C-FHPELPIIITGSEDGT 252
YL++ + D+T +VWD + + CV+ +G+ HN C + P+ I GS D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 253 VRIWHATTYRL 263
V +W T+ R+
Sbjct: 310 VYVWDTTSRRV 320
Score = 220 (82.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 65/232 (28%), Positives = 104/232 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
+ + H + C HP + S+ D LI LW+ +GHS VM++ +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN-CVDYFTGGDKPYLI-TGSDDH 209
+ F SAS D+T+ +W+ + + L H VN C G P L+ TGSDD
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG---PQLVCTGSDDG 175
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T K+WD + K+ VQT + +T+ V AV F+ II+G D +++W +L T+
Sbjct: 176 TVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAK-HN 320
+ V + ++ + T V++ P A + KI HN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNT--VRVWDVRPFAPKERCVKIFQGNVHN 284
Score = 196 (74.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 55/221 (24%), Positives = 104/221 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARK--QWVVAGADDMFIRVYNYNTMDKVKVF 95
TV +W+ ++ K + V S + AR+ Q V G+DD +++++ V+ F
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF 191
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ +T + V + T ++S D IK+WD + + T GH+ V ++ + + +
Sbjct: 192 Q-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL-TYTMRGHADSVTGLSLSSEGS 249
Query: 156 NTFASASLDRTIKIWNLGSPDPN------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
++A +D T+++W++ P F + H N + D + GS D
Sbjct: 250 YLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADR 308
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
VWD ++ + L GH +++ V FHP+ PII++ S D
Sbjct: 309 FVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/199 (23%), Positives = 87/199 (43%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYN-YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
V KF + + D I ++N Y D + H+ + + + + S+S
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSAS 129
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +WD E G ++ +GH+ +V + + S D T+K+W++
Sbjct: 130 TDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAV 188
Query: 179 FTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
T + +Q V V + D+ +I+G D+ KVWD + T+ GH +V+ +
Sbjct: 189 QTFQNTYQ--VLAVTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 244
Query: 238 HPELPIIITGSEDGTVRIW 256
E +++ + D TVR+W
Sbjct: 245 SSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 222 (83.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 64/251 (25%), Positives = 115/251 (45%)
Query: 24 HPSEPWILASLYSGTVCIWN-YQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82
HP+ + ++ + + +WN Y + + V + + + + D +
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 83 VYNYNTMDKVKVFEAHTDYIR-CVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGH 141
V++ T ++VK + HT ++ C V + SDD +KLWD K Q F+ +
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ-N 193
Query: 142 SHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
++ V+ VTFN DT+ S +D IK+W+L +T+ H V + + G
Sbjct: 194 TYQVLAVTFN--DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS-- 249
Query: 201 YLITGSDDHTAKVWDYQT----KSCVQTLEGHTHNVSAV---C-FHPELPIIITGSEDGT 252
YL++ + D+T +VWD + + CV+ +G+ HN C + P+ I GS D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 253 VRIWHATTYRL 263
V +W T+ R+
Sbjct: 310 VYVWDTTSRRI 320
Score = 219 (82.2 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 64/232 (27%), Positives = 104/232 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
+ + H + C HP + S+ D LI LW+ +GHS VM++ +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN-CVDYFTGGDKPYLI-TGSDDH 209
+ F SAS D+T+ +W+ + + L H VN C G P L+ TGSDD
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG---PQLVCTGSDDG 175
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T K+WD + K+ +QT + +T+ V AV F+ II+G D +++W +L T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAK-HN 320
+ V + ++ + T V++ P A + KI HN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNT--VRVWDVRPFAPKERCVKIFQGNVHN 284
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 54/221 (24%), Positives = 104/221 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARK--QWVVAGADDMFIRVYNYNTMDKVKVF 95
TV +W+ ++ K + V S + AR+ Q V G+DD +++++ ++ F
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 191
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ +T + V + T ++S D IK+WD + + T GH+ V ++ + + +
Sbjct: 192 Q-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL-TYTMRGHADSVTGLSLSSEGS 249
Query: 156 NTFASASLDRTIKIWNLGSPDPN------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
++A +D T+++W++ P F + H N + D + GS D
Sbjct: 250 YLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADR 308
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
VWD ++ + L GH +++ V FHP+ PII++ S D
Sbjct: 309 FVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/199 (23%), Positives = 87/199 (43%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYN-YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
V KF + + D I ++N Y D + H+ + + + + S+S
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSAS 129
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +WD E G ++ +GH+ +V + + S D T+K+W++
Sbjct: 130 TDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 179 FTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
T + +Q V V + D+ +I+G D+ KVWD + T+ GH +V+ +
Sbjct: 189 QTFQNTYQ--VLAVTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 244
Query: 238 HPELPIIITGSEDGTVRIW 256
E +++ + D TVR+W
Sbjct: 245 SSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 222 (83.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 64/251 (25%), Positives = 115/251 (45%)
Query: 24 HPSEPWILASLYSGTVCIWN-YQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82
HP+ + ++ + + +WN Y + + V + + + + D +
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 83 VYNYNTMDKVKVFEAHTDYIR-CVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGH 141
V++ T ++VK + HT ++ C V + SDD +KLWD K Q F+ +
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ-N 193
Query: 142 SHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
++ V+ VTFN DT+ S +D IK+W+L +T+ H V + + G
Sbjct: 194 TYQVLAVTFN--DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS-- 249
Query: 201 YLITGSDDHTAKVWDYQT----KSCVQTLEGHTHNVSAV---C-FHPELPIIITGSEDGT 252
YL++ + D+T +VWD + + CV+ +G+ HN C + P+ I GS D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 253 VRIWHATTYRL 263
V +W T+ R+
Sbjct: 310 VYVWDTTSRRI 320
Score = 219 (82.2 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 64/232 (27%), Positives = 104/232 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
+ + H + C HP + S+ D LI LW+ +GHS VM++ +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN-CVDYFTGGDKPYLI-TGSDDH 209
+ F SAS D+T+ +W+ + + L H VN C G P L+ TGSDD
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG---PQLVCTGSDDG 175
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T K+WD + K+ +QT + +T+ V AV F+ II+G D +++W +L T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAK-HN 320
+ V + ++ + T V++ P A + KI HN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNT--VRVWDVRPFAPKERCVKIFQGNVHN 284
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 54/221 (24%), Positives = 104/221 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARK--QWVVAGADDMFIRVYNYNTMDKVKVF 95
TV +W+ ++ K + V S + AR+ Q V G+DD +++++ ++ F
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 191
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ +T + V + T ++S D IK+WD + + T GH+ V ++ + + +
Sbjct: 192 Q-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL-TYTMRGHADSVTGLSLSSEGS 249
Query: 156 NTFASASLDRTIKIWNLGSPDPN------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
++A +D T+++W++ P F + H N + D + GS D
Sbjct: 250 YLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADR 308
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
VWD ++ + L GH +++ V FHP+ PII++ S D
Sbjct: 309 FVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/199 (23%), Positives = 87/199 (43%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYN-YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
V KF + + D I ++N Y D + H+ + + + + S+S
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSAS 129
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +WD E G ++ +GH+ +V + + S D T+K+W++
Sbjct: 130 TDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 179 FTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
T + +Q V V + D+ +I+G D+ KVWD + T+ GH +V+ +
Sbjct: 189 QTFQNTYQ--VLAVTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 244
Query: 238 HPELPIIITGSEDGTVRIW 256
E +++ + D TVR+W
Sbjct: 245 SSEGSYLLSNAMDNTVRVW 263
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 222 (83.2 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 64/251 (25%), Positives = 115/251 (45%)
Query: 24 HPSEPWILASLYSGTVCIWN-YQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82
HP+ + ++ + + +WN Y + + V + + + + D +
Sbjct: 76 HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 83 VYNYNTMDKVKVFEAHTDYIR-CVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGH 141
V++ T ++VK + HT ++ C V + SDD +KLWD K Q F+ +
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-AAIQTFQ-N 193
Query: 142 SHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
++ V+ VTFN DT+ S +D IK+W+L +T+ H V + + G
Sbjct: 194 TYQVLAVTFN--DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS-- 249
Query: 201 YLITGSDDHTAKVWDYQT----KSCVQTLEGHTHNVSAV---C-FHPELPIIITGSEDGT 252
YL++ + D+T +VWD + + CV+ +G+ HN C + P+ I GS D
Sbjct: 250 YLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF 309
Query: 253 VRIWHATTYRL 263
V +W T+ R+
Sbjct: 310 VYVWDTTSRRI 320
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 63/232 (27%), Positives = 104/232 (44%)
Query: 92 VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFN 151
+ + H + C HP + S+ D LI LW+ +GHS VM++ +N
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN-CVDYFTGGDKPYLI-TGSDDH 209
+ F SAS D+T+ +W+ + + L H VN C G P L+ TGSDD
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG---PQLVCTGSDDG 175
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T K+WD + K+ +QT + +T+ V AV F+ II+G D +++W +L T+
Sbjct: 176 TVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG 234
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAK-HN 320
+ V + ++ + T V++ P A + +I HN
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNT--VRVWDVRPFAPKERCVRIFQGNVHN 284
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 54/221 (24%), Positives = 104/221 (47%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARK--QWVVAGADDMFIRVYNYNTMDKVKVF 95
TV +W+ ++ K + V S + AR+ Q V G+DD +++++ ++ F
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF 191
Query: 96 EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT 155
+ +T + V + T ++S D IK+WD + + T GH+ V ++ + + +
Sbjct: 192 Q-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL-TYTMRGHADSVTGLSLSSEGS 249
Query: 156 NTFASASLDRTIKIWNLGSPDPN------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDH 209
++A +D T+++W++ P F + H N + D + GS D
Sbjct: 250 YLLSNA-MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADR 308
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSED 250
VWD ++ + L GH +++ V FHP+ PII++ S D
Sbjct: 309 FVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 46/199 (23%), Positives = 87/199 (43%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYN-YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
V KF + + D I ++N Y D + H+ + + + + S+S
Sbjct: 70 VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSAS 129
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D + +WD E G ++ +GH+ +V + + S D T+K+W++
Sbjct: 130 TDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 179 FTL-DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
T + +Q V V + D+ +I+G D+ KVWD + T+ GH +V+ +
Sbjct: 189 QTFQNTYQ--VLAVTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 244
Query: 238 HPELPIIITGSEDGTVRIW 256
E +++ + D TVR+W
Sbjct: 245 SSEGSYLLSNAMDNTVRVW 263
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 227 (85.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 30 ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTM 89
+L +G +WN + + + VR A++ +W+++G ++ + N +
Sbjct: 96 LLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWSTDGRWLISGDGGGMVKYFEPN-L 154
Query: 90 DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFE--GHSHYVMQ 147
+ VK+ +AH +R VA P +++SDD +K+W++ M T+ + GH V
Sbjct: 155 NNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFH---MSTEELKLTGHGWDVKT 211
Query: 148 VTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSD 207
V ++P AS S D +K W+ + TL H+ + + YL T S
Sbjct: 212 VDWHPSK-GLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSR 270
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP-IIITGSEDGTV 253
D T +V+D + V+ L GH +V+ V +HP P ++ TG DG+V
Sbjct: 271 DSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSV 317
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 228 (85.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 50/198 (25%), Positives = 102/198 (51%)
Query: 59 PVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSS 118
PV S +F+ +++ ++D IR ++ + +++ H + + + P + S+S
Sbjct: 341 PVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASAS 400
Query: 119 DDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPN 178
D +LW +++ + +I+ GH V V F+P ++N A+ S D+T+++W+ +
Sbjct: 401 YDHTARLWSFDRTYPL-RIYAGHLAGVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSV 458
Query: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
H V C+ + G YL++ +D K+WD + + + L GHT ++++V F
Sbjct: 459 RLFTGHCGPVRCLAFSPNGQ--YLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFS 516
Query: 239 PELPIIITGSEDGTVRIW 256
+ +I + S D +VRIW
Sbjct: 517 LDSSVIASASMDNSVRIW 534
Score = 220 (82.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 62/257 (24%), Positives = 114/257 (44%)
Query: 88 TMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQ 147
T + KV H + P +LS S+D I+ WD E + T +++GH++ V
Sbjct: 328 TATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLES-FTNTVLYQGHAYPVWD 386
Query: 148 VTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSD 207
+ +P FASAS D T ++W+ P H GV+CV + + YL TGS
Sbjct: 387 LDISPHSL-FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSN--YLATGST 443
Query: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
D T ++W Q + V+ GH V + F P +++ ED +++W + L L
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Query: 268 NYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMD-NSGKIIWAKHNEIQTV 325
+ + + ++ + S I + ++ + I + D +S +++ ++ TV
Sbjct: 504 HGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTV 563
Query: 326 -NIKSVGADYEVTDGER 341
N++ + + G R
Sbjct: 564 LNVQFMAGSRLLVTGIR 580
Score = 207 (77.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 42/157 (26%), Positives = 82/157 (52%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V +D+ P + ++ Y T +W++ + + V KF ++ G+
Sbjct: 384 VWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGST 443
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ + V++F H +RC+A P Y++S+ +D L+KLWD G + +
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS 174
GH+ + VTF+ D++ ASAS+D +++IW++ S
Sbjct: 504 -HGHTDDITSVTFS-LDSSVIASASMDNSVRIWDIKS 538
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 70/264 (26%), Positives = 115/264 (43%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELP---VR 61
++ +R L +V +D + I++S G V +W+ S T K VT +P V
Sbjct: 53 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWD--SFTTNKEHAVT-MPCTWVM 109
Query: 62 SAKFVARKQWVVAGADDMFIRVY------NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVL 115
+ + + G D VY N N K K HT+Y+ + + +L
Sbjct: 110 ACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQIL 169
Query: 116 SSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDT-NTFASASLDRTIKIWNLGS 174
++S D LWD E G + Q F GH V+ + P +T NTF S D+ +W++ S
Sbjct: 170 TASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 228
Query: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT--KSCVQTLEGHTHNV 232
+ H+ VN V Y+ GD +GSDD T +++D + + + + E
Sbjct: 229 GQCVQAFETHESDVNSVRYYPSGDA--FASGSDDATCRLYDLRADREVAIYSKESIIFGA 286
Query: 233 SAVCFHPELPIIITGSEDGTVRIW 256
S+V F ++ G D T+ +W
Sbjct: 287 SSVDFSLSGRLLFAGYNDYTINVW 310
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 53/200 (26%), Positives = 88/200 (44%)
Query: 62 SAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSD 119
+ F ++ + D +++ + ++ F H + C+ + P T +S
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
D +WD G C Q FE H V V + P + FAS S D T ++++L + D
Sbjct: 218 DKKAMVWDMRSG-QCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRA-DREV 274
Query: 180 TLDAHQK---GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVC 236
+ + + G + VD+ G L G +D+T VWD S V L GH + VS +
Sbjct: 275 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLR 332
Query: 237 FHPELPIIITGSEDGTVRIW 256
P+ +GS D T+R+W
Sbjct: 333 VSPDGTAFCSGSWDHTLRVW 352
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKP 200
H++Y+ +F D +AS D T +W++ S + H V C+D
Sbjct: 152 HTNYLSACSFTNSDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 210
Query: 201 YLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
++G D A VWD ++ CVQ E H +V++V ++P +GS+D T R++
Sbjct: 211 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA 270
Query: 261 YRLENTLNYGLERVW----AIGYMKSSRRIVIGYDEGTIMV 297
R E + Y E + ++ + S R + GY++ TI V
Sbjct: 271 DR-EVAI-YSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 309
Score = 136 (52.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 39/157 (24%), Positives = 71/157 (45%)
Query: 18 VKSVDLHPSEPW--ILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAG 75
V +DL PSE ++ +W+ +S ++FE E V S ++ +G
Sbjct: 198 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASG 257
Query: 76 ADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP--YVLSSSDDMLIKLWDWEKGWM 133
+DD R+Y+ +V ++ + +V +L + + +D I +WD KG
Sbjct: 258 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 317
Query: 134 CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
+ +F GH + V + +P D F S S D T+++W
Sbjct: 318 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 352
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 226 (84.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 67/254 (26%), Positives = 119/254 (46%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V GA D R+++ +T + + H +++ CV+ P + + S D I+LWD + G
Sbjct: 159 MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSG 218
Query: 132 WMCTQIFEGHSHYVMQVTFNP----KDTNT--FASASLDRTIKIWNLGSPDPNFTLDAHQ 185
GHS ++ +++ P K + AS+S D TIKIW+ S +T+ H
Sbjct: 219 QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHT 278
Query: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS-CVQTLEGHTHNVSAVCFHPELPII 244
V+CV + G + L +GS D T +VWD ++ C+ L+ H H V+ + + +
Sbjct: 279 NSVSCVKW---GGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALR 335
Query: 245 ITGSEDGTVRIWHATTYRLENTL-NYGLERVWAIGYMKSSRRIVIGYDEGTIMV--KIGR 301
I G+ D T + + L NY E++ S +V D+ T+ + +
Sbjct: 336 I-GAFDHTGKKPSTPEEAQKKALENY--EKICKKNG-NSEEMMVTASDDYTMFLWNPLKS 391
Query: 302 EEPVASMDNSGKII 315
+P+A M K++
Sbjct: 392 TKPIARMTGHQKLV 405
Score = 191 (72.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 58/266 (21%), Positives = 121/266 (45%)
Query: 26 SEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYN 85
S+P + +S GT+ IW+ S+ + V K+ + + +G+ D +RV++
Sbjct: 247 SKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW-GGQGLLYSGSHDRTVRVWD 305
Query: 86 YNTMDK-VKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHY 144
N+ + + + ++H ++ +++ + + D K E+ + E +
Sbjct: 306 INSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQK--KALENYEKI 363
Query: 145 VMQVTFNPKDTNTFASASLDRTIKIWN-LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI 203
+ N +AS D T+ +WN L S P + HQK VN V + G Y++
Sbjct: 364 CKK---NGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGR--YIV 418
Query: 204 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
+ S D++ K+WD + + T GH +V V + + ++++ S+D T+++W T +L
Sbjct: 419 SASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKL 478
Query: 264 ENTLNYGLERVWAIGYMKSSRRIVIG 289
L + V+ + + +R+ G
Sbjct: 479 SVDLPGHKDEVYTVDWSVDGKRVCSG 504
Score = 177 (67.4 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 58/251 (23%), Positives = 112/251 (44%)
Query: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
GH ++ F P ++ + + D T +IW+ + P TL H V CV + G+
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGE- 199
Query: 200 PYLITGSDDHTAKVWDYQTKSCV-QTLEGHTHNVSAVCFHP-------ELPIIITGSEDG 251
+ TGS D+T ++WD ++ C+ L GH+ ++++ + P P + + S+DG
Sbjct: 200 -VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDG 258
Query: 252 TVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEPVASMDN 310
T++IW + + T++ V + + + G + T+ V I + ++
Sbjct: 259 TIKIWDTVSRVCQYTMSGHTNSVSCVKW-GGQGLLYSGSHDRTVRVWDINSQGRCINILK 317
Query: 311 SGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDL--YPQSLKHNPNGRFV 368
S W H + T +GA ++ T G++ P +E L Y + K N N +
Sbjct: 318 S-HAHWVNHLSLSTDYALRIGA-FDHT-GKK-PSTPEEAQKKALENYEKICKKNGNSEEM 373
Query: 369 VVCGDGEYIIY 379
+V +Y ++
Sbjct: 374 MVTASDDYTMF 384
Score = 159 (61.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 46/145 (31%), Positives = 67/145 (46%)
Query: 114 VLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
++++SDD + LW+ K GH V V F+P D SAS D +IK+W+
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP-DGRYIVSASFDNSIKLWD-- 430
Query: 174 SPDPNF--TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
D F T H V V + D L++ S D T KVWD +T+ L GH
Sbjct: 431 GRDGKFISTFRGHVASVYQVAW--SSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDE 488
Query: 232 VSAVCFHPELPIIITGSEDGTVRIW 256
V V + + + +G +D VR+W
Sbjct: 489 VYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 60/292 (20%), Positives = 122/292 (41%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQS-QTMAKSFE-----VTEL---PVRSAKFVAR 68
V V P I T+ +W+ +S Q + + +T L P+ K
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVK-PGS 247
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVF--EAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
K + + + D I++++ T+ +V + HT+ + CV + S S D +++W
Sbjct: 248 KPRLASSSKDGTIKIWD--TVSRVCQYTMSGHTNSVSCVKWGGQ-GLLYSGSHDRTVRVW 304
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
D C I + H+H+V ++ + + D T K + L+ ++K
Sbjct: 305 DINSQGRCINILKSHAHWVNHLSLSTD--YALRIGAFDHTGKKPSTPEEAQKKALENYEK 362
Query: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWD-YQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
C G + ++T SDD+T +W+ ++ + + GH V+ V F P+ I+
Sbjct: 363 --ICKK--NGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV 418
Query: 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
+ S D ++++W + +T + V+ + + R +V + T+ V
Sbjct: 419 SASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKV 470
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 220 (82.5 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 66/252 (26%), Positives = 115/252 (45%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
LAQ ++R K+ DL A L SG N Q+ M E E + +A+F +
Sbjct: 12 LAQEAKRSKN-DLMAYTNRDKALLESGVRRTSNLQAPIM--QLEGHEGEIFTAEFHPEGE 68
Query: 71 WVVAGADDMFIRVYN-YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+++ D I ++ Y + V H+ + P ++ + S D + WD
Sbjct: 69 LLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIA 128
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
G + F+GH ++V V + + S S DRTIKIW+ TL++ + V
Sbjct: 129 TGQRQRR-FKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VT 186
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
V + G++ +I+G D+ K+WD + ++ + L GH+ ++ + PE I+T +
Sbjct: 187 AVCFGDTGEQ--VISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 250 DGTVRIWHATTY 261
D T+R+W Y
Sbjct: 245 DNTLRVWDVRPY 256
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/253 (23%), Positives = 109/253 (43%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR-K 69
++ S V P I T+ W+ + + F+ V S + R +
Sbjct: 94 MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQ 153
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Q + +G+DD I++++ E+ + V T V+S D +K+WD
Sbjct: 154 QLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIR 212
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF----TLDAHQ 185
K + + GHS + ++ +P+ +A +D T+++W++ P HQ
Sbjct: 213 KQAVLHHL-RGHSDTITGMSLSPEGDFILTNA-MDNTLRVWDVRPYAPGERCVKVFQGHQ 270
Query: 186 KG-----VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
+ C + G DK + +GS D +WD T+ + L GH +V+AV F P+
Sbjct: 271 HNFEKNLLRCA-WSPGSDK--ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPK 327
Query: 241 LPIIITGSEDGTV 253
P+I++GS D T+
Sbjct: 328 EPLILSGSSDKTL 340
Score = 181 (68.8 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 69/287 (24%), Positives = 114/287 (39%)
Query: 20 SVDLHPSEPWILASLYSGTVCIWN-YQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADD 78
+ + HP +L+S + + IW Y+ + V A F + + D
Sbjct: 60 TAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTD 119
Query: 79 MFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVL-SSSDDMLIKLWDWEKGWMCTQI 137
+ ++ T + + F+ H +++ V +L S SDD IK+WD K
Sbjct: 120 KTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKH-AAHT 178
Query: 138 FEGHSHYVMQVTFNPKDTNT-FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
E V V F DT S +D +KIW++ L H + +
Sbjct: 179 LES-PFQVTAVCFG--DTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPE 235
Query: 197 GDKPYLITGSDDHTAKVWDYQT----KSCVQTLEGHTHNVSAV---C-FHPELPIIITGS 248
GD +++T + D+T +VWD + + CV+ +GH HN C + P I +GS
Sbjct: 236 GD--FILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGS 293
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
D V IW T R+ L V A+ + I+ G + T+
Sbjct: 294 ADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/168 (24%), Positives = 74/168 (44%)
Query: 139 EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGD 198
EGH + F+P+ S+ DR I IW + N + G +FT D
Sbjct: 52 EGHEGEIFTAEFHPEG-ELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTP-D 109
Query: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE-LPIIITGSEDGTVRIWH 257
++ T S D T WD T + +GH + V++V ++ +GS+D T++IW
Sbjct: 110 GSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWD 169
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV 305
A +TL + V A+ + + +++ G + + + R++ V
Sbjct: 170 ARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 220 (82.5 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 67/282 (23%), Positives = 127/282 (45%)
Query: 4 RLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSA 63
+++++R L ++ ++ ++++ G + +W+ + + + V +
Sbjct: 51 KIKVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTC 110
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDK-VKV---FEAHTDYIRCVAVHPTLPYVLSSSD 119
+ +V G D +YN + ++ ++V +HT Y+ C +++SS
Sbjct: 111 AYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQ-IVTSSG 169
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
DM LWD E G T+ F H+ VM V+ +P D N F S + D T K+W+L S
Sbjct: 170 DMTCILWDVENGTKITE-FSDHNGDVMSVSVSP-DKNYFISGACDATAKLWDLRSGKCVQ 227
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT-KSCVQ-TLEGHTHNVSAVCF 237
T H+ +N V YF G TGSDD + +++D + + +Q T + +++V F
Sbjct: 228 TFTGHEADINAVQYFPNGLS--FGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGF 285
Query: 238 HPELPIIITGSEDGTVRIWHATT-YRLENTLNYGLERVWAIG 278
+ G +D T +W R+ + +G RV +G
Sbjct: 286 SFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHG-NRVSCLG 326
Score = 196 (74.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 54/195 (27%), Positives = 89/195 (45%)
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
+F+ +Q +V + DM +++ K+ F H + V+V P Y +S + D
Sbjct: 157 RFLNDRQ-IVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATA 215
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP--NFTL 181
KLWD G C Q F GH + V + P + F + S D + +++++ + +T
Sbjct: 216 KLWDLRSG-KCVQTFTGHEADINAVQYFPNGLS-FGTGSDDASCRLFDIRADRELMQYTH 273
Query: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
D G+ V + G +L G DD T VWD V +L GH + VS + +
Sbjct: 274 DNILCGITSVGFSFSGR--FLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLGVPTDG 331
Query: 242 PIIITGSEDGTVRIW 256
+ TGS D ++IW
Sbjct: 332 MALCTGSWDSLLKIW 346
Score = 190 (71.9 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 62/248 (25%), Positives = 113/248 (45%)
Query: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKG 131
+V+ + D + V++ T +KV + ++ A PT +V D + +++
Sbjct: 77 LVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANFVACGGLDNICSIYNLRSR 136
Query: 132 W----MCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+C ++ H+ Y+ F + ++S D T +W++ + H
Sbjct: 137 EQPIRVCREL-NSHTGYLSCCRF--LNDRQIVTSSGDMTCILWDVENGTKITEFSDHNGD 193
Query: 188 VNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
V V DK Y I+G+ D TAK+WD ++ CVQT GH +++AV + P TG
Sbjct: 194 VMSVS--VSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTG 251
Query: 248 SEDGTVRIWHATTYR--LENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV-KIGREEP 304
S+D + R++ R ++ T + L + ++G+ S R + GYD+ T V + E
Sbjct: 252 SDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGER 311
Query: 305 VASMDNSG 312
V S+ G
Sbjct: 312 VLSLTGHG 319
WARNING: HSPs involving 1164 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 915 870 0.00084 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1414
No. of states in DFA: 635 (67 KB)
Total size of DFA: 489 KB (2226 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.49u 0.10s 72.59t Elapsed: 00:00:03
Total cpu time: 72.63u 0.10s 72.73t Elapsed: 00:00:04
Start: Tue May 21 08:01:10 2013 End: Tue May 21 08:01:14 2013
WARNINGS ISSUED: 2