BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002503
(914 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297739148|emb|CBI28799.3| unnamed protein product [Vitis vinifera]
Length = 935
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/929 (66%), Positives = 723/929 (77%), Gaps = 35/929 (3%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADN 60
ME K KIKI + IAS A +SI FT Q R+RR +C Q SCYL +EPKPQ++FK VLADN
Sbjct: 1 MESKEKIKIVVAIASFAVLSIFFTAQYRKRR-YRKCTQSSCYLHTEPKPQYSFKLVLADN 59
Query: 61 SYSPFKH-----ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETK 115
SYS FKH +N E S SHPYE EI+ALLEN EF F +DL+ SDS+VWVET+
Sbjct: 60 SYSAFKHLKLGESNSETSLHSHPYEAEISALLENAEIEFSFGTESMDLKISDSYVWVETE 119
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
QL ELA+ LSK+ FAVDTEQHSLRSFLGFTALIQIST+ EDYLVDTIALHD + +LQP
Sbjct: 120 LQLKELADVLSKQRVFAVDTEQHSLRSFLGFTALIQISTQNEDYLVDTIALHDTLDVLQP 179
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
FA+P +CKVFHG+DNDV+WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA
Sbjct: 180 VFANPSICKVFHGADNDVLWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 239
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
TNK LQREDWRQRPL EML+YAQTDAHYLLYIA CL+AEL+Q +ENS CPDDK FVL
Sbjct: 240 TNKLLQREDWRQRPLSVEMLEYAQTDAHYLLYIANCLIAELRQHDSENSCCPDDKLRFVL 299
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT--QDLVRRLCAW 353
EASRRSNTVCLQ+Y KEIE PGE+AASSI R LNGQGG+SS + QDLVRRLC W
Sbjct: 300 EASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSKACDLQFQDLVRRLCTW 359
Query: 354 RDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSP 413
RDLMARVHDESLR+VLSDQAIIALA+K P + ++ T I+QAD +VD L+ SS LPSPSP
Sbjct: 360 RDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILPSPSP 419
Query: 414 VVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSN 473
VVCSHL+D + + LDD+ L LQK LGP+GSCPLSVFNY + +K N +L +N
Sbjct: 420 VVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKL---TN 476
Query: 474 KFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYL 533
+ V KQNG+K S+QV +KASR+LFV+KFSCKSPVYHNCRI+A+DGRLLCYCDR+KLEWY+
Sbjct: 477 RLVSKQNGIKNSKQVGQKASRELFVKKFSCKSPVYHNCRIFASDGRLLCYCDRRKLEWYV 536
Query: 534 TRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCY 593
R LAKLV+DNP AIMLLFEPKGRPEDE N+FY+QSKKNICV CGE NHYLRYRIIPSCY
Sbjct: 537 RRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYLRYRIIPSCY 596
Query: 594 RIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEAR 653
R+HFPE LKSHRSHDIVLLCVDCHEVAH+AAEKYKK+I+AEFGIPLF+ KV DSR+A+
Sbjct: 597 RMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKVVDSREAQVA 656
Query: 654 PGFSAS-ITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDL 712
S S + EAGVSPLQLRTAAMALL HGP MPS R EELR+ VM+YYGGREI++EDL
Sbjct: 657 SQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYGGREITEEDL 716
Query: 713 ERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADNVLG 772
E+ALLVGMSP ER+R +K+G+SLK SK FP+++Q+S M S +A K D G
Sbjct: 717 EKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMGTSPIDNALKVDGEGG 776
Query: 773 LHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSV 832
L+ + + G++E + L + E +N D+ S+ S+ KD V
Sbjct: 777 LNTTKGEACGKQENGNDLEITMEVLASDSNNLSSDR-------------SETSEMKDMCV 823
Query: 833 GNVDDECENSSVQNGF---------GSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDG 883
+ D+ CE+ S G G++SP N K+SLLGHGPHGK+VVD+LL+EYGEDG
Sbjct: 824 MDTDN-CESRSQSEGTLDLFYPKSNGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYGEDG 882
Query: 884 IRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
IRQFCQRWRQ FVEA+HP FLPAGWDVMH
Sbjct: 883 IRQFCQRWRQTFVEAIHPRFLPAGWDVMH 911
>gi|225447009|ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
Length = 936
Score = 1208 bits (3126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/918 (66%), Positives = 705/918 (76%), Gaps = 62/918 (6%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADN 60
ME K KIKI + IAS A +SI FT Q R+RR +C Q SCYL +EPKPQ++FK VLADN
Sbjct: 1 MESKEKIKIVVAIASFAVLSIFFTAQYRKRR-YRKCTQSSCYLHTEPKPQYSFKLVLADN 59
Query: 61 SYSPFKH-----ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETK 115
SYS FKH +N E S SHPYE EI+ALLEN EF F +DL+ SDS+VWVET+
Sbjct: 60 SYSAFKHLKLGESNSETSLHSHPYEAEISALLENAEIEFSFGTESMDLKISDSYVWVETE 119
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
QL ELA+ LSK+ FAVDTEQHSLRSFLGFTALIQIST+ EDYLVDTIALHD + +LQP
Sbjct: 120 LQLKELADVLSKQRVFAVDTEQHSLRSFLGFTALIQISTQNEDYLVDTIALHDTLDVLQP 179
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
FA+P +CKVFHG+DNDV+WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA
Sbjct: 180 VFANPSICKVFHGADNDVLWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 239
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
TNK LQREDWRQRPL EML+YAQTDAHYLLYIA CL+AEL+Q +ENS CPDDK FVL
Sbjct: 240 TNKLLQREDWRQRPLSVEMLEYAQTDAHYLLYIANCLIAELRQHDSENSCCPDDKLRFVL 299
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
EASRRSNTVCLQ+Y KEIE PGE+AASSI R LNGQGG+SS + QDLVRRLC WRD
Sbjct: 300 EASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSKACDLQDLVRRLCTWRD 359
Query: 356 LMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVV 415
LMARVHDESLR+VLSDQAIIALA+K P + ++ T I+QAD +VD L+ SS LPSPSPVV
Sbjct: 360 LMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILPSPSPVV 419
Query: 416 CSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKF 475
CSHL+D + + LDD+ L LQK LGP+GSCPLSVFNY + +K N +L +N+
Sbjct: 420 CSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKL---TNRL 476
Query: 476 VYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTR 535
V KQNG+K S+QV +KASR+LFV+KFSCKSPVYHNCRI+A+DGRLLCYCDR+KLEWY+ R
Sbjct: 477 VSKQNGIKNSKQVGQKASRELFVKKFSCKSPVYHNCRIFASDGRLLCYCDRRKLEWYVRR 536
Query: 536 DLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRI 595
LAKLV+DNP AIMLLFEPKGRPEDE N+FY+QSKKNICV CGE NHYLRYRIIPSCYR+
Sbjct: 537 GLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYLRYRIIPSCYRM 596
Query: 596 HFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPG 655
HFPE LKSHRSHDIVLLCVDCHEVAH+AAEKYKK+I+AEFGIPLF+ KV DSR+A+
Sbjct: 597 HFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKVVDSREAQVASQ 656
Query: 656 FSAS-ITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
S S + EAGVSPLQLRTAAMALL HGP MPS R EELR+ VM+YYGGREI++EDLE+
Sbjct: 657 LSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYGGREITEEDLEK 716
Query: 715 ALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADNVLGLH 774
ALLVGMSP ER+R +K+G+SLK SK FP+++Q+S + +M + DN L +
Sbjct: 717 ALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKEQES------NARSMGTSPIDNALKVD 770
Query: 775 AIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSVGN 834
+ + E RS S G +D + K N
Sbjct: 771 DMCVMDTDNCESRSQ------------SEGTLD-----LFYPKSN--------------- 798
Query: 835 VDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQV 894
G++SP N K+SLLGHGPHGK+VVD+LL+EYGEDGIRQFCQRWRQ
Sbjct: 799 --------------GNASPKHNPKLSLLGHGPHGKEVVDHLLKEYGEDGIRQFCQRWRQT 844
Query: 895 FVEALHPHFLPAGWDVMH 912
FVEA+HP FLPAGWDVMH
Sbjct: 845 FVEAIHPRFLPAGWDVMH 862
>gi|255566405|ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 977
Score = 1173 bits (3034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/941 (65%), Positives = 710/941 (75%), Gaps = 36/941 (3%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLN-QCPQYSCYLQSEPKPQHNFKRVLAD 59
ME K KI+IAI I SLAAIS +FTRQ R RR+ +C SCYL S+ KPQ +FKRVLAD
Sbjct: 1 MEYKEKIRIAIAIVSLAAISFVFTRQYRNRRRQRQKCSSSSCYLHSDQKPQCSFKRVLAD 60
Query: 60 NSYSPFKH-----------ANKEKSSGSHPYELEITALLENPRPEFDF---SNVDLDLQR 105
NS+S FKH A SS SHPYE EI+AL+EN EF F S VDL +
Sbjct: 61 NSFSQFKHLKLHGNKNGFDAMSGNSSSSHPYEREISALIENSGIEFGFEINSIVDLK-EM 119
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
D +VWVET+SQL EL + LS + FAVDTEQHSLRSFLGFTAL+QIST+KEDYL+DTIA
Sbjct: 120 KDDYVWVETESQLKELTDELSNQSVFAVDTEQHSLRSFLGFTALVQISTQKEDYLLDTIA 179
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
LHD + IL FA+P +CKVFHG DND++WLQRDFHIYVVNLFDTAKACEVLSKPQKSLA
Sbjct: 180 LHDAMGILGAVFANPKICKVFHGGDNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 239
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
YLLETYCGV+TNK LQREDWRQRPLPAEMLQYA TDAHYLLYIA CL+AELKQ+ N+NSY
Sbjct: 240 YLLETYCGVSTNKLLQREDWRQRPLPAEMLQYALTDAHYLLYIASCLIAELKQKDNDNSY 299
Query: 286 C-PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
PD K F+LEASRRSN +C+Q+YTKE+E +PG+AAASS+F R LN QGG SS+S Q
Sbjct: 300 SYPDVKLKFILEASRRSNMICMQLYTKEVEEFPGDAAASSLFSRYLNDQGG-SSVSCEIQ 358
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNL 404
DLVRRLC WR+LMARVHDE LRFVLSDQAI++LANK N ++Y TIAQAD ++D +N
Sbjct: 359 DLVRRLCTWRELMARVHDEGLRFVLSDQAIVSLANKVSTNAMEIYDTIAQAD-NMDPMNC 417
Query: 405 SSSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKN 464
SS PSPSPVVCSH D + N NLDDI LQKCLGPNGSCPLSV+NY L
Sbjct: 418 ISSQPSPSPVVCSHFYDFCCLIQENKSNLDDIFSLLLQKCLGPNGSCPLSVYNYALLISC 477
Query: 465 NWELKNQSNKFVYKQNGVKVSRQVAKKA--SRDLFVQKFSCKSPVYHNCRIYANDGRLLC 522
+ L N+S + K+NG K S+QVA+KA SR+LFVQKFSCKSPVYHNCRIYANDGRLLC
Sbjct: 478 DVRLTNRS---MSKKNGFKSSKQVARKASRSRELFVQKFSCKSPVYHNCRIYANDGRLLC 534
Query: 523 YCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNH 582
YCDR+KLEWYL R+LA LV++NPPAI LLFEPKGRPEDE N+FYIQSK+NICV CGEG+H
Sbjct: 535 YCDRRKLEWYLHRELAILVDENPPAIRLLFEPKGRPEDEDNDFYIQSKRNICVGCGEGSH 594
Query: 583 YLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIH 642
YLRYRIIPSCYRIHFPE LKSHRSHDIVLLCVDCHEVAHAAAEKYK+ ++ EFGIPLF+
Sbjct: 595 YLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRHVAVEFGIPLFVR 654
Query: 643 KVADSRKAEARPGFSASI-TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRY 701
KV DS+++ S+S+ T EAGVSPLQLRTAAMALL HGP MP RREEL +IV +Y
Sbjct: 655 KVVDSKESAIISESSSSLMTAEEAGVSPLQLRTAAMALLRHGPRMPPKRREELTQIVTQY 714
Query: 702 YGGREISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESAT 761
YGGREISQEDLERALLVGMSP ERRR KKRGLSLK S + + + MV+S+
Sbjct: 715 YGGREISQEDLERALLVGMSPHERRRFEKKRGLSLKRS-ANNICSNNELVHDVTMVKSSV 773
Query: 762 MDATKADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNST 821
+ + D I ++ E + ++ + SN + V + K MNS
Sbjct: 774 ENNSITDTPDSSQTINSELRTEVKEDQDFFKTTDPDVGVSSNLQVAD-VSAAAHKDMNSN 832
Query: 822 -SKVSDSKDDSVGNVDDECENSSVQNGFGSSSPT--------PNSKVSLLGHGPHGKQVV 872
++VSD K+ GN D CE + S+ PT NSK+SLLGHGPHGKQVV
Sbjct: 833 ENEVSDGKEICAGNDGDTCEINPPNGIVCSNYPTHGGHGLSKNNSKLSLLGHGPHGKQVV 892
Query: 873 DYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHR 913
++LL+EYG+DGIR+FCQRWRQVFVEA+HP FLPAGWDVMHR
Sbjct: 893 EHLLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGWDVMHR 933
>gi|147856691|emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
Length = 951
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/930 (63%), Positives = 694/930 (74%), Gaps = 64/930 (6%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADN 60
ME K KIKI + IAS A +SI FT Q R+RR +C Q SCYL +EPKPQ++FK VLADN
Sbjct: 1 MESKEKIKIVVAIASFAVLSIFFTAQYRKRR-YRKCTQSSCYLHTEPKPQYSFKXVLADN 59
Query: 61 SYSPFKH-----ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETK 115
SYS FKH + E S SHPYE EI+ALLEN EF F +DL+ SDS+VWVET+
Sbjct: 60 SYSAFKHLKLGESXSETSLHSHPYEAEISALLENAEIEFSFGTESMDLKISDSYVWVETE 119
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
QL ELA+ LSK+ FAVDTEQHSLRSFLGFTALIQIST+ EDYLVDTIALHD + +LQP
Sbjct: 120 LQLKELADVLSKQRVFAVDTEQHSLRSFLGFTALIQISTQNEDYLVDTIALHDTLDVLQP 179
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
FA+P +CKVFHG+DNDV+WLQRDFHI VVNLFDTAK
Sbjct: 180 VFANPSICKVFHGADNDVLWLQRDFHIXVVNLFDTAK----------------------- 216
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
REDWRQRPL EML+YAQTDAHYLLYIA CL+AEL+Q +ENS CPDDK FVL
Sbjct: 217 ------REDWRQRPLSVEMLEYAQTDAHYLLYIANCLIAELRQHDSENSCCPDDKLRFVL 270
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ--DLVRRLCAW 353
EASRRSNTVCLQ+Y KEIE PGE+AASSI R LNGQGG+SS + Q DLVRRLC W
Sbjct: 271 EASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSKACDLQFQDLVRRLCTW 330
Query: 354 RDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSP 413
RDLMARVHDESLR+VLSDQAIIALA+K P + ++ T I+QAD +VD L+ SS LPSPSP
Sbjct: 331 RDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILPSPSP 390
Query: 414 VVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSN 473
VVCSHL+D + + LDD+ L LQK LGP+GSCPLSVFNY + +K N +L +N
Sbjct: 391 VVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKL---TN 447
Query: 474 KFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYL 533
+ V KQNG+K S+QV +KASR+LFV+KFSCKSPVYHNCRI+A+DG+LLCYCDR+KLEWY+
Sbjct: 448 RLVSKQNGIKNSKQVGQKASRELFVKKFSCKSPVYHNCRIFASDGQLLCYCDRRKLEWYV 507
Query: 534 TRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCY 593
R LAKLV+DNP AIMLLFEPKGRPEDE N+FY+QSKKNICV CGE NHYLRYRIIPSCY
Sbjct: 508 RRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQSKKNICVGCGERNHYLRYRIIPSCY 567
Query: 594 RIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEAR 653
R+HFPE LKSHRSHDIVLLCVDCHEVAH+AAEKYKK+I+AEFGIPLF+ KV DSR+A+
Sbjct: 568 RMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKKKIAAEFGIPLFVQKVVDSREAQVA 627
Query: 654 PGFSAS-ITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDL 712
S S + EAGVSPLQLRTAAMALL HGP MPS R EELR+ VM+YYGGREI++EDL
Sbjct: 628 SQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPSKRCEELRQTVMKYYGGREITEEDL 687
Query: 713 ERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADNVLG 772
E+ALLVGMSP ER+R +K+G+SLK SK FP+++Q+S M S +A K D G
Sbjct: 688 EKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKEQESNARSMGTSPIDNALKVDGEGG 747
Query: 773 LHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSV 832
L+ + + G++E + L + E +N D+ S+ S+ KD V
Sbjct: 748 LNTTKGEACGKQENGNDLEITMEVLASDSNNLSSDR-------------SETSEMKDMCV 794
Query: 833 GNVDDECENSSVQNGF---------GSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDG 883
+ D+ CE+ S G G++SP N K+SLLGHGPHGK+VVD+LL+EYGEDG
Sbjct: 795 MDTDN-CESRSQSEGTLDLFYPKSBGNASPKHNPKLSLLGHGPHGKEVVDHLLKEYGEDG 853
Query: 884 IRQFCQRWRQVFVEALHPHFLPAGWDVMHR 913
IRQFCQRWRQ FVEA+HP FLPAGWDVMHR
Sbjct: 854 IRQFCQRWRQTFVEAIHPRFLPAGWDVMHR 883
>gi|449453692|ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204374 [Cucumis sativus]
Length = 877
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/923 (63%), Positives = 686/923 (74%), Gaps = 83/923 (8%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADN 60
ME + K+KIA+ +AS AA++ILFT ++R + + SCYL+ + KPQ+ FKRVLADN
Sbjct: 1 MELQHKLKIALVVASFAALTILFTARRR---RKRRSVSTSCYLRDDQKPQYAFKRVLADN 57
Query: 61 SYSPFKHANKEKSSG-------SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVE 113
SYS FKH + G SHPYE EI +LLEN PEF+F + DL SD++ WVE
Sbjct: 58 SYSAFKHLKLNMNKGIYNNDVNSHPYESEILSLLENSSPEFNFISERTDLTLSDTYAWVE 117
Query: 114 TKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISIL 173
T SQL EL + L+KE FAVDTEQHSLRSFLGFTALIQIST KEDYLVDTIALHD +++L
Sbjct: 118 TVSQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSMNLL 177
Query: 174 QPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 233
+P FA+ +CKVFHG+DND++WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG
Sbjct: 178 RPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 237
Query: 234 VATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNF 293
VATNK LQREDWRQRPLPA+M+QYA+TDAHYLLYIA CL+ ELKQ NENS DDKFNF
Sbjct: 238 VATNKMLQREDWRQRPLPADMVQYARTDAHYLLYIANCLLVELKQV-NENS-STDDKFNF 295
Query: 294 VLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAW 353
+LEASRRSN CLQ+Y+KE E PGE+AASSI+ R LN QGG + IS TQD VRRLCAW
Sbjct: 296 LLEASRRSNMTCLQLYSKETEGSPGESAASSIWSRHLNSQGGSALISCKTQDRVRRLCAW 355
Query: 354 RDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSP 413
RDLMARVHDESLR+VLSDQAI+A+A + P N ++Y TIAQ D +VD L+ S LPSPS
Sbjct: 356 RDLMARVHDESLRYVLSDQAIVAIAIQVPKNTGELYATIAQVDLNVD-LSSSLFLPSPSS 414
Query: 414 VVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSN 473
VVCSHLDD+ + +N +LD+I L LQ C+G NGSCPLS+FNY L K N ++ S
Sbjct: 415 VVCSHLDDIHCLLHDNFGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS- 473
Query: 474 KFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYL 533
K N K ++Q++KKASR+LFVQKFSCKSPVYHNCRIYANDGRLLCYCDR+KLEWYL
Sbjct: 474 ----KHNDRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYL 529
Query: 534 TRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCY 593
R+LA+LV D+PPAI LLFEPKGRPEDEGN+FYIQSKKNICV CGEGNHYLRYRIIPSCY
Sbjct: 530 RRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCY 589
Query: 594 RIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKA--- 650
R+HFPE LKSHRSHDIVLLCVDCHE AHAAAEKYK++++AEFGIPLF+ +V D+++A
Sbjct: 590 RVHFPEHLKSHRSHDIVLLCVDCHETAHAAAEKYKRELAAEFGIPLFVRRVVDTKEAFDM 649
Query: 651 EARPGFSASITNF-EAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQ 709
A P S S TN E GVSPL+LRTAAMALL HGP MP R+EEL +VM+YYG REIS+
Sbjct: 650 AAEP--SDSETNVQEEGVSPLELRTAAMALLRHGPRMPLKRQEELMFVVMKYYGRREISE 707
Query: 710 EDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADN 769
EDLERALLVGMSP ERRR KK+GL+ K S + FPD ++ + A ++++T+D++
Sbjct: 708 EDLERALLVGMSPHERRRLQKKKGLAFKHSPQSVFPDAERQN-GACNIDTSTVDSSSV-- 764
Query: 770 VLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKD 829
S TC GG ++ FS N +K + K
Sbjct: 765 -----------------------GDGSVSETCVPGG--EVSFSD-----NGYAKTAQPKF 794
Query: 830 DSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ 889
+S K+SLLGHGPHGK VVDYLL+EYGEDGIRQFCQ
Sbjct: 795 NS--------------------------KLSLLGHGPHGKLVVDYLLKEYGEDGIRQFCQ 828
Query: 890 RWRQVFVEALHPHFLPAGWDVMH 912
RWRQVFV A+ P FLPAGWDV H
Sbjct: 829 RWRQVFVAAIQPRFLPAGWDVNH 851
>gi|449493231|ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101225221 [Cucumis sativus]
Length = 877
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/923 (63%), Positives = 684/923 (74%), Gaps = 83/923 (8%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADN 60
ME + K+KIA+ +AS AA++ILFT ++R + + SCYL+ + KPQ+ FKRVLADN
Sbjct: 1 MELQHKLKIALVVASFAALTILFTARRR---RKRRSVSTSCYLRDDQKPQYAFKRVLADN 57
Query: 61 SYSPFKHANKEKSSG-------SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVE 113
SYS FKH + G SHPYE EI +LLEN PEF+F + DL SD++ WVE
Sbjct: 58 SYSAFKHLKLNMNKGIYNNDVNSHPYESEILSLLENSSPEFNFISERTDLTLSDTYAWVE 117
Query: 114 TKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISIL 173
T SQL EL + L+KE FAVDTEQHSLRSFLGFTALIQIST KEDYLVDTIALHD +++L
Sbjct: 118 TVSQLEELVDVLNKEMVFAVDTEQHSLRSFLGFTALIQISTHKEDYLVDTIALHDSLNLL 177
Query: 174 QPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 233
+P FA+ +CKVFHG+DND++WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG
Sbjct: 178 RPVFANSRICKVFHGADNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 237
Query: 234 VATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNF 293
VATNK LQREDWRQRPLPA+M+QYA+TDAHYLLYIA CL+ ELKQ NENS DDKFNF
Sbjct: 238 VATNKMLQREDWRQRPLPADMVQYARTDAHYLLYIANCLLVELKQV-NENS-STDDKFNF 295
Query: 294 VLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAW 353
+LEASRRSN CLQ+Y+KE E PGE+AASSI+ R LN QGG + IS TQD VRRLCAW
Sbjct: 296 LLEASRRSNMTCLQLYSKETEGSPGESAASSIWSRHLNSQGGSALISCKTQDRVRRLCAW 355
Query: 354 RDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSP 413
RDLMARVHDESLR+VLSDQAI+A+A + P N ++Y TIAQ D +VD L+ S LPSPS
Sbjct: 356 RDLMARVHDESLRYVLSDQAIVAIAIQVPKNTGELYATIAQVDLNVD-LSSSLFLPSPSS 414
Query: 414 VVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSN 473
VVCSHLDD+ + +N +LD+I L LQ C+G NGSCPLS+FNY L K N ++ S
Sbjct: 415 VVCSHLDDIHCLLHDNFGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS- 473
Query: 474 KFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYL 533
K N K ++Q++KKASR+LFVQKFSCKSPVYHNCRIYANDGRLLCYCDR+KLEWYL
Sbjct: 474 ----KHNDRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYL 529
Query: 534 TRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCY 593
R+LA+LV D+PPAI LLFEPKGRPEDEGN+FYIQSK NICV CGEGNHYLRYRIIPSCY
Sbjct: 530 RRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQSKXNICVGCGEGNHYLRYRIIPSCY 589
Query: 594 RIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKA--- 650
R+HFPE LKSHRSHDIVLLCVDCHE AHAAAEKYK++++AEFGIPLF+ +V D+++A
Sbjct: 590 RVHFPEHLKSHRSHDIVLLCVDCHETAHAAAEKYKRELAAEFGIPLFVRRVVDTKEAFDM 649
Query: 651 EARPGFSASITNF-EAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQ 709
A P S S TN E GVSPL+LRTAAMALL HGP MP R+EEL +VM+YYG REIS+
Sbjct: 650 AAEP--SDSETNVQEEGVSPLELRTAAMALLRHGPRMPLKRQEELMFVVMKYYGRREISE 707
Query: 710 EDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADN 769
EDLERALLVGMSP ERRR KK+GL+ K S + FPD + + A ++++T+D++
Sbjct: 708 EDLERALLVGMSPHERRRLQKKKGLAFKHSPQSVFPDAEHQN-GACNIDTSTVDSSSV-- 764
Query: 770 VLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKD 829
S TC GG ++ FS N +K + K
Sbjct: 765 -----------------------GDGSVSETCVPGG--EVSFSD-----NGYAKTAQPKF 794
Query: 830 DSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ 889
+S K+SLLGHGPHGK VVDYLL+EYGEDGIRQFCQ
Sbjct: 795 NS--------------------------KLSLLGHGPHGKLVVDYLLKEYGEDGIRQFCQ 828
Query: 890 RWRQVFVEALHPHFLPAGWDVMH 912
RWRQVFV A+ P FLPAGWDV H
Sbjct: 829 RWRQVFVAAIQPRFLPAGWDVNH 851
>gi|297826687|ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
gi|297327065|gb|EFH57485.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/927 (59%), Positives = 661/927 (71%), Gaps = 72/927 (7%)
Query: 1 MEKKAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQY--SCYLQSEPKPQHNFKRVLA 58
ME + K KI IT+ASL A+++LF + RRR + Q SCYL SE K Q FKRVLA
Sbjct: 1 MEVREKAKIVITVASLVAVTVLFVAEYRRRHRKKQTSSSLSSCYLHSELKSQFGFKRVLA 60
Query: 59 DNSYSPFKH-------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVW 111
DNSYS FKH ++ E SS HPYE EIT LLENPR EF F + L+ SDS+VW
Sbjct: 61 DNSYSEFKHLKLDDASSSLENSSNGHPYETEITVLLENPRIEFGFLRGEYSLEMSDSYVW 120
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
VET+ QL ELA L+KE FAVDTEQHSLRSFLGFTALIQIST ++D+LVDTI LHD +S
Sbjct: 121 VETELQLKELAEILAKEKVFAVDTEQHSLRSFLGFTALIQISTHEKDFLVDTIVLHDAMS 180
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
IL+P F++P +CKVFHG+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 ILRPVFSEPNICKVFHGADNDVLWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLETV 240
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
CGVATNK LQREDWRQRPL EM++YA+TDAHYLLYIA L AELKQ E+S PDD+F
Sbjct: 241 CGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTAELKQLATEDSSSPDDRF 300
Query: 292 NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLC 351
+F+LEASRRSN CLQ+YTKE E +PG AAASSI +R LNG G S+IS ++LVR+LC
Sbjct: 301 HFLLEASRRSNMTCLQLYTKETEDFPGSAAASSIIYRHLNGHGDKSNISLNAEELVRKLC 360
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPS- 410
AWRDLM R+HDES R+VLSDQAI+ LA K P ++Y TIA D + SS
Sbjct: 361 AWRDLMGRIHDESTRYVLSDQAIVGLACKQPTTNEEIYDTIAHTDLATESSPSLSSSVQS 420
Query: 411 PSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKN 470
P PV+CSHLDD+ + + + LDDIL L+KCLG NG+CP+SVFNY L +L +
Sbjct: 421 PYPVICSHLDDIYEMILDKLAKLDDILPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSS 480
Query: 471 QSNKFVYKQNGVK-VSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKL 529
S KQNG K +Q +KASR+LFV+KFSCK+PVYHNCRIYANDGRLLCYCD++KL
Sbjct: 481 HSAP---KQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKL 537
Query: 530 EWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRII 589
EWYL R LAKLVE+NPPAIMLLFEPKGRPEDEGN+FYIQ+K+NICV CGEG HYLRYRII
Sbjct: 538 EWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRII 597
Query: 590 PSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRK 649
PSCYR+HFPE LKSHRSHDIVLLCVDCHEVAHAAAE+YKKQI+ EFGIPLF+ +V DS++
Sbjct: 598 PSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKE 657
Query: 650 AEARPGF--SASITNFE-AGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGRE 706
A+ S N E AGVSPL LR+AAMALL HG MPS+RREEL + V YYGGR+
Sbjct: 658 AQGTSSLVEDESTGNSEDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGRD 717
Query: 707 ISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATK 766
IS+EDLE+ALL+G+SP ERR+ +K+G+S K S D+Q+D
Sbjct: 718 ISEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQED---------------- 761
Query: 767 ADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMN-STSKVS 825
E ++ + P S K MN S V+
Sbjct: 762 -------------------------EYNDGEAPAYSE------------KIMNVERSTVA 784
Query: 826 DSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIR 885
D D D E + Q G++ NSK+SLLGHGPHGKQ+V+Y+LRE+GEDG+R
Sbjct: 785 DDSGDGTSEGDGASELNDTQCN-GNTLHQQNSKLSLLGHGPHGKQIVEYILREHGEDGVR 843
Query: 886 QFCQRWRQVFVEALHPHFLPAGWDVMH 912
FCQRWR+VFV+A+HP LP GW+V H
Sbjct: 844 DFCQRWRKVFVDAVHPRHLPGGWNVSH 870
>gi|356515280|ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
Length = 873
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/927 (60%), Positives = 669/927 (72%), Gaps = 92/927 (9%)
Query: 1 MEKKAKIKIAITIASL----AAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQ-HNFKR 55
M ++ +A T+A+L A I +LF RRR++ P CYL SE KPQ FKR
Sbjct: 1 MTNAHRMCVAFTVATLSTAAAVIYVLFA--ARRRKQHKSSP---CYLHSEQKPQCAAFKR 55
Query: 56 VLADNSYSPFKHANK----------EKSSGSHPYELEITALLENPRPEFDFSNVDLDLQR 105
V+ADNSY+PFKH E +S SHPYE EITALL+NP PE + DL+
Sbjct: 56 VVADNSYTPFKHLINDDAEFSCFLTENASNSHPYEAEITALLKNPLPEIELGTEIADLEM 115
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
DS+VWV T+ QL EL + LS+E FFAVDTEQHSLRSFLGFTAL+QIST ++DYLVDTIA
Sbjct: 116 KDSYVWVHTEMQLKELVDVLSEERFFAVDTEQHSLRSFLGFTALVQISTREKDYLVDTIA 175
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
LHD + IL+P FA+P +CKVFHG+DND++WLQRDFHIYVVNLFDT+KACEVLSKPQKSLA
Sbjct: 176 LHDFMGILRPIFANPSICKVFHGADNDIVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLA 235
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
YLLETYCGV TNK LQREDWRQRPL AEM+ YA+TDAHYLLYIA CL+ ELKQ NENS
Sbjct: 236 YLLETYCGVTTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIANCLINELKQLDNENS- 294
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
DDKF+FVLEASRRSN +CLQ++ KEIE+ PGE++A S+F R ++ G SIS+ Q+
Sbjct: 295 SSDDKFHFVLEASRRSNMICLQLFKKEIEASPGESSALSLFSRRVSSH-GFPSISNEAQN 353
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLS 405
+VR+LC WRDLMAR+HDESL++VLSDQAI+ALA++ A+ +++Y TIAQAD +++ + ++
Sbjct: 354 IVRQLCTWRDLMARIHDESLKYVLSDQAIVALASQPSASHSEIYNTIAQADINME-MGVN 412
Query: 406 SSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNN 465
+PSPSPVVCSHL D+ + N ++N DI LQKCLG NGSCPLS+FNY L +N
Sbjct: 413 PLIPSPSPVVCSHLSDIYHLLANKLDN--DIYSVILQKCLGQNGSCPLSIFNYALLVNSN 470
Query: 466 WELKNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCD 525
YKQ G K +Q ++KASRDLFV+KFSCKS VYHNCRIYANDGRLLCYCD
Sbjct: 471 LR-----PTLAYKQPGPKNPKQYSRKASRDLFVKKFSCKSAVYHNCRIYANDGRLLCYCD 525
Query: 526 RKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLR 585
R+KLEWYL+RDLAKL+++ PPAIMLLFEPKGRPEDEGN+FYIQSKKNICV CGEGNHYLR
Sbjct: 526 RRKLEWYLSRDLAKLIDEEPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLR 585
Query: 586 YRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVA 645
YRIIPSCYRIHFPE LKSHRSHDIVLLCVDCHEVAHAAAEKYK++++ EFGIPL++ +V
Sbjct: 586 YRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKVAVEFGIPLYLQRV- 644
Query: 646 DSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR 705
PG E GVSPLQLRTAAMALL HGP MP NR EEL I+ RYYGGR
Sbjct: 645 ------VHPGQKTEKQIEERGVSPLQLRTAAMALLRHGPRMPLNRHEELTEIIKRYYGGR 698
Query: 706 EISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDAT 765
EIS EDLERAL VGM+P ERRR KKRG S K S ++QD++ + T AT
Sbjct: 699 EISDEDLERALQVGMTPHERRRFEKKRGFSFKHSIGNTATVQKQDNHSI----NGTASAT 754
Query: 766 KADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVS 825
N++ +ET T+ +ES
Sbjct: 755 SNRNMI---TVET------------TDYNES----------------------------- 770
Query: 826 DSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIR 885
DS NVDD C +S +NG NSK+SLLGHGPHGK+VV+YLL+EYGEDGIR
Sbjct: 771 ---SDSAINVDDSCLSSRQENGLSEH----NSKLSLLGHGPHGKRVVEYLLKEYGEDGIR 823
Query: 886 QFCQRWRQVFVEALHPHFLPAGWDVMH 912
FCQRWRQVFV+A++P FLP GWDV H
Sbjct: 824 AFCQRWRQVFVDAVNPRFLPGGWDVKH 850
>gi|160892403|gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 892
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/927 (59%), Positives = 668/927 (72%), Gaps = 71/927 (7%)
Query: 1 MEKKAKIKIAITIASLAAISILF-TRQQRRRRKLNQCPQYS-CYLQSEPKPQHNFKRVLA 58
ME K K K+ IT+ASL A++ILF T +RRR++ Q S CYL SE KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 59 DNSYSPFKH--------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV 110
DNSYS FKH ++ EK S HPYE EIT LLENP+ EF F + L+ SDS+V
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WVET+SQL ELA L+KE FAVDTEQHSLRSFLGFTALIQIST +ED+LVDTIALHD +
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
SIL+P F+DP +CKVFHG+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
CGVATNK LQREDWRQRPL EM++YA+TDAHYLLYIA L ELKQ E+S PDD+
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATEDSSSPDDR 300
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
F+F+LEASRRSN CLQ+YTKE E +PG AA+SSI +R LNG G S+IS ++LVR+L
Sbjct: 301 FHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNAEELVRKL 360
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVD-CLNLSSSLP 409
CAWRDLM R+HDES R+VLSDQAI+ L+ K P ++Y TIA D + +LSSS+
Sbjct: 361 CAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQ 420
Query: 410 SPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELK 469
SP PV+CSHLDD+ + + + + LDD+L L+KCLG NG+CP+SVFNY L +L
Sbjct: 421 SPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLS 480
Query: 470 NQSNKFVYKQNGVK-VSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+ S KQNG K +Q +KASR+LFV+KFSCK+PVYHNCRIYANDGRLLCYCD++K
Sbjct: 481 SHSAP---KQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRK 537
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
LEWYL R LAKLVE+NPPAIMLLFEPKGRPEDEGN+FYIQ+K+NICV CGEG HYLRYRI
Sbjct: 538 LEWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRI 597
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IPSCYR+HFPE LKSHRSHDIVLLCVDCHEVAHAAAE+YKKQI+ EFGIPLF+ +V DS+
Sbjct: 598 IPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSK 657
Query: 649 KAEARPGF---SASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR 705
+A+ ++ + +AGVSPL LR+AAMALL HG MPS+RREEL + V YYGGR
Sbjct: 658 EAQGTSSLVEDESTGDSEDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGR 717
Query: 706 EISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDAT 765
++S+EDLE+ALL+G+SP ERR+ +K+G+S K S D+Q+D
Sbjct: 718 DLSEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQEDE-------------- 763
Query: 766 KADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVS 825
+N G F I ST V
Sbjct: 764 ------------------------------------NNDGEALADFEKIMTVERST--VV 785
Query: 826 DSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIR 885
D D D E + Q G++ NSK+SLLGHGPHGKQ+V+YLLRE+GEDG+R
Sbjct: 786 DDSGDGTSEGDGAKELNDTQCN-GNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVR 844
Query: 886 QFCQRWRQVFVEALHPHFLPAGWDVMH 912
FCQRWR+VFV+A+HP LP GW+V H
Sbjct: 845 DFCQRWRKVFVDAVHPRHLPGGWNVSH 871
>gi|334184634|ref|NP_001189656.1| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253589|gb|AEC08683.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 872
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/929 (59%), Positives = 670/929 (72%), Gaps = 72/929 (7%)
Query: 1 MEKKAKIKIAITIASLAAISILF-TRQQRRRRKLNQCPQYS-CYLQSEPKPQHNFKRVLA 58
ME K K K+ IT+ASL A++ILF T +RRR++ Q S CYL SE KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 59 DNSYSPFKH--------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV 110
DNSYS FKH ++ EK S HPYE EIT LLENP+ EF F + L+ SDS+V
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WVET+SQL ELA L+KE FAVDTEQHSLRSFLGFTALIQIST +ED+LVDTIALHD +
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
SIL+P F+DP +CKVFHG+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
CGVATNK LQREDWRQRPL EM++YA+TDAHYLLYIA L ELKQ ++S PDD+
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATDSS-SPDDR 299
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
F+F+LEASRRSN CLQ+YTKE E +PG AA+SSI +R LNG G S+IS ++LVR+L
Sbjct: 300 FHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNAEELVRKL 359
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVD-CLNLSSSLP 409
CAWRDLM R+HDES R+VLSDQAI+ L+ K P ++Y TIA D + +LSSS+
Sbjct: 360 CAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQ 419
Query: 410 SPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELK 469
SP PV+CSHLDD+ + + + + LDD+L L+KCLG NG+CP+SVFNY L +L
Sbjct: 420 SPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLS 479
Query: 470 NQSNKFVYKQNGVK-VSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+ S KQNG K +Q +KASR+LFV+KFSCK+PVYHNCRIYANDGRLLCYCD++K
Sbjct: 480 SHSAP---KQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRK 536
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
LEWYL R LAKLVE+NPPAIMLLFEPKGRPEDEGN+FYIQ+K+NICV CGEG HYLRYRI
Sbjct: 537 LEWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRI 596
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IPSCYR+HFPE LKSHRSHDIVLLCVDCHEVAHAAAE+YKKQI+ EFGIPLF+ +V DS+
Sbjct: 597 IPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSK 656
Query: 649 KAEARPGF---SASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR 705
+A+ ++ + +AGVSPL LR+AAMALL HG MPS+RREEL + V YYGGR
Sbjct: 657 EAQGTSSLVEDESTGDSEDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGR 716
Query: 706 EISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDAT 765
++S+EDLE+ALL+G+SP ERR+ +K+G+S K S D+Q+D
Sbjct: 717 DLSEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQEDE-------------- 762
Query: 766 KADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVS 825
+N G F I ST V
Sbjct: 763 ------------------------------------NNDGEALADFEKIMTVERST--VV 784
Query: 826 DSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIR 885
D D D E + Q G++ NSK+SLLGHGPHGKQ+V+YLLRE+GEDG+R
Sbjct: 785 DDSGDGTSEGDGAKELNDTQCN-GNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVR 843
Query: 886 QFCQRWRQVFVEALHPHFLPAGWDVMHRI 914
FCQRWR+VFV+A+HP LP GW+V HR+
Sbjct: 844 DFCQRWRKVFVDAVHPRHLPGGWNVSHRV 872
>gi|240254568|ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253588|gb|AEC08682.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 891
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/927 (59%), Positives = 668/927 (72%), Gaps = 72/927 (7%)
Query: 1 MEKKAKIKIAITIASLAAISILF-TRQQRRRRKLNQCPQYS-CYLQSEPKPQHNFKRVLA 58
ME K K K+ IT+ASL A++ILF T +RRR++ Q S CYL SE KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 59 DNSYSPFKH--------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV 110
DNSYS FKH ++ EK S HPYE EIT LLENP+ EF F + L+ SDS+V
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WVET+SQL ELA L+KE FAVDTEQHSLRSFLGFTALIQIST +ED+LVDTIALHD +
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
SIL+P F+DP +CKVFHG+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
CGVATNK LQREDWRQRPL EM++YA+TDAHYLLYIA L ELKQ ++S PDD+
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATDSS-SPDDR 299
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
F+F+LEASRRSN CLQ+YTKE E +PG AA+SSI +R LNG G S+IS ++LVR+L
Sbjct: 300 FHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNAEELVRKL 359
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVD-CLNLSSSLP 409
CAWRDLM R+HDES R+VLSDQAI+ L+ K P ++Y TIA D + +LSSS+
Sbjct: 360 CAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQ 419
Query: 410 SPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELK 469
SP PV+CSHLDD+ + + + + LDD+L L+KCLG NG+CP+SVFNY L +L
Sbjct: 420 SPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLS 479
Query: 470 NQSNKFVYKQNGVK-VSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+ S KQNG K +Q +KASR+LFV+KFSCK+PVYHNCRIYANDGRLLCYCD++K
Sbjct: 480 SHSAP---KQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRK 536
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
LEWYL R LAKLVE+NPPAIMLLFEPKGRPEDEGN+FYIQ+K+NICV CGEG HYLRYRI
Sbjct: 537 LEWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRI 596
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IPSCYR+HFPE LKSHRSHDIVLLCVDCHEVAHAAAE+YKKQI+ EFGIPLF+ +V DS+
Sbjct: 597 IPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSK 656
Query: 649 KAEARPGF---SASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR 705
+A+ ++ + +AGVSPL LR+AAMALL HG MPS+RREEL + V YYGGR
Sbjct: 657 EAQGTSSLVEDESTGDSEDAGVSPLHLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGR 716
Query: 706 EISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDAT 765
++S+EDLE+ALL+G+SP ERR+ +K+G+S K S D+Q+D
Sbjct: 717 DLSEEDLEKALLIGLSPHERRKLERKKGVSFKHSAEVAGMDKQEDE-------------- 762
Query: 766 KADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVS 825
+N G F I ST V
Sbjct: 763 ------------------------------------NNDGEALADFEKIMTVERST--VV 784
Query: 826 DSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIR 885
D D D E + Q G++ NSK+SLLGHGPHGKQ+V+YLLRE+GEDG+R
Sbjct: 785 DDSGDGTSEGDGAKELNDTQCN-GNTLHQQNSKLSLLGHGPHGKQIVEYLLREHGEDGVR 843
Query: 886 QFCQRWRQVFVEALHPHFLPAGWDVMH 912
FCQRWR+VFV+A+HP LP GW+V H
Sbjct: 844 DFCQRWRKVFVDAVHPRHLPGGWNVSH 870
>gi|357471299|ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355506989|gb|AES88131.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
Length = 974
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/975 (57%), Positives = 687/975 (70%), Gaps = 88/975 (9%)
Query: 1 MEKKAKIKIAITIASLAAISILF-TRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLAD 59
M + K ++A TI +L +I+F T ++ RRRK + P SCY SEPKPQ FKRVLAD
Sbjct: 1 MNNEHKTRVAFTIVTLTTAAIIFFTVRRMRRRKQRESPSSSCYSHSEPKPQSAFKRVLAD 60
Query: 60 NSYSPFKHA--NKEKSSGS----------------------------------------- 76
NSY+PFKH N K++G+
Sbjct: 61 NSYAPFKHLSFNASKNNGNTFFFLLSHRFSIHQRCATNPAHILNCEDQAESSVFCTGNGS 120
Query: 77 --HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVD 134
HP++ EITALL+N +PE + L++ +DS+VWV+T+ QL +L N LSKE FF VD
Sbjct: 121 SLHPFQAEITALLQNHQPEIELGAEKLEM--NDSYVWVDTEMQLKKLVNVLSKEKFFGVD 178
Query: 135 TEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVM 194
TEQHSLRSFLGFT L+QIST++EDYL+DTIALHD + IL+P FADP +CKVFHG+DNDV+
Sbjct: 179 TEQHSLRSFLGFTGLVQISTQQEDYLIDTIALHDSMEILRPVFADPSICKVFHGADNDVL 238
Query: 195 WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQ-----REDWRQRP 249
WLQRDFHIYVVNLFDT+KACEVLSKPQKSLAYLLETYCGV TNK LQ REDWRQRP
Sbjct: 239 WLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVNTNKLLQVWPNYREDWRQRP 298
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
L AEM+ YA+TDAHYLLYIA CL+ ELKQ NENS C DDKF+FVLEASRRSN +CLQ++
Sbjct: 299 LSAEMVHYARTDAHYLLYIANCLIDELKQLDNENS-CSDDKFHFVLEASRRSNMICLQLF 357
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ--DLVRRLCAWRDLMARVHDESLRF 367
TKEIE+ PGE+AA S++ R + + SIS+ TQ +VR+LC WRDLMAR+HDESL++
Sbjct: 358 TKEIEASPGESAALSLYSRHQSNRAS-PSISNETQFLSIVRQLCTWRDLMARIHDESLKY 416
Query: 368 VLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVC 427
VLSDQAI+ALA++ PA+ +++Y +I Q D + + LSSS+PSPSPVVCSHL D+ +
Sbjct: 417 VLSDQAIVALASRLPASNSEIYNSIVQTDVNAET-GLSSSIPSPSPVVCSHLTDICHLLA 475
Query: 428 NNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKVSRQ 487
N + N DI LQKCLG NG+C L++ NY L N S K++ +K RQ
Sbjct: 476 NKLVNHGDIYSVILQKCLGQNGNCKLNISNYALLVNCNVRPTLSS-----KRSSLKNPRQ 530
Query: 488 VAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPA 547
+KKASR+LFV+KFSCKSPVYHNCRI+ANDGRLLCYCDRKKLEWYL+RDLAK+V++ PPA
Sbjct: 531 HSKKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEWYLSRDLAKVVDEEPPA 590
Query: 548 IMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSH 607
IMLLFEPKGRPEDEGN+FYIQSKKNICV CGEGNHYLRYRIIPSCYRIHFPE LKSHRSH
Sbjct: 591 IMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSH 650
Query: 608 DIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGV 667
DIVLLCVDCHE AHAAAEKYK+++++EFGIPL++ +V PG N E GV
Sbjct: 651 DIVLLCVDCHEAAHAAAEKYKRKVASEFGIPLYVRRV-------IHPGQETEKPNDEGGV 703
Query: 668 SPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRR 727
SPLQLR+AA+ALL HGP MP +RREEL I+ YYGGREIS+EDLE+AL VGM+P ERR+
Sbjct: 704 SPLQLRSAAVALLRHGPRMPHDRREELTEIIKTYYGGREISKEDLEKALQVGMTPHERRK 763
Query: 728 HAKKRGLSLKMSKPTD----FPDRQQDSYPAVMVESATMDATKADNVLGLHAIETQKSGE 783
KKRG+S K S + + D P + + D K D + G + E +SG+
Sbjct: 764 FEKKRGVSSKHSTGSASAVPYEGNDTDYAPGM----SNGDTLKVDTLDGSYVNEETRSGD 819
Query: 784 KE----GRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSVGNVDDEC 839
G+ SL T SNG + +V T + TS D+S+ +
Sbjct: 820 NRQDDSGKPSLASDLAVDKAT-SNG--NTIVVKTTDHDDDETSYSLVDTDESLNKMQPNV 876
Query: 840 --ENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVE 897
+ S+++ ++ +SK+SLLGHGPHGKQVVD+LL+EYGEDGIR+FCQRWRQVFV+
Sbjct: 877 VSDEESIKDE-DTTQAKHHSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQRWRQVFVD 935
Query: 898 ALHPHFLPAGWDVMH 912
AL P FLP GWDV H
Sbjct: 936 ALKPRFLPGGWDVKH 950
>gi|414886885|tpg|DAA62899.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 951
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/925 (52%), Positives = 616/925 (66%), Gaps = 69/925 (7%)
Query: 29 RRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANK------------------ 70
RR + P+ +C + E KPQ FKRVLADNSYSPFKH +
Sbjct: 42 RRLGVGGRPRRAC--EEEEKPQDRFKRVLADNSYSPFKHPRRKSAQLGSAEGEAPLPPPQ 99
Query: 71 EKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
E S HP+E EIT+LL+NP F D + S ++ WV T++QL LA L +E
Sbjct: 100 ELSQKGHPFEEEITSLLKNPPGFHSFMLCDQCPEMSATYNWVHTETQLEHLARLLGEERA 159
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVDTEQHS+RSFLG+TAL+QIST+ EDYL+DTIALHD + IL+P FA+ +CK+FHG+D
Sbjct: 160 FAVDTEQHSIRSFLGYTALMQISTQNEDYLIDTIALHDVMGILRPVFANSSICKIFHGAD 219
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
ND++WLQRDFHIYVVN+FDTAKACE+L KPQKSLAYLLE YC V T+K +QREDWR RPL
Sbjct: 220 NDILWLQRDFHIYVVNMFDTAKACEILLKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPL 279
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
EM++YA+TDAHYLLYIA CL +EL + +Y DK NF EAS RSN VC+Q+Y+
Sbjct: 280 TPEMIEYARTDAHYLLYIANCLASEL----HAKAYTSSDKINFFFEASHRSNMVCMQLYS 335
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
KEIES PG ++A+SI R L G S SS +DLV + CAWRDLMAR+HDESLR+VL
Sbjct: 336 KEIESPPGASSATSILSRNLQTHGFDSKKSSEVKDLVWKFCAWRDLMARMHDESLRYVLP 395
Query: 371 DQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNV 430
DQAI ALA P T+V+ IA+ D + ++ SL SPSP+V +H+ ++ + +
Sbjct: 396 DQAIAALAVSLPKGPTEVFAVIAETDLSIS--SMYPSLSSPSPLVVAHVKELCYLLDDIT 453
Query: 431 ENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKVSRQVAK 490
++D I + L+K P+G C LSV+NY L + LK Q++ F +G K++ K
Sbjct: 454 TSMDSIFKSLLEKYKDPSGLCRLSVYNYNL--ITHLSLK-QTSMFSVAPSGKKLTALPNK 510
Query: 491 KASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIML 550
K SRDLF++KFSCKSPVYHNCRIYA+DGRLLCYCDRKKLEWY+ R+LAKL+E++PPAIML
Sbjct: 511 KVSRDLFIKKFSCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIENSPPAIML 570
Query: 551 LFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIV 610
LFEPKGRPEDE NEFYIQSKKNICV CGE +HY+RYRIIPSCYR+HFPE LKSHRSHDIV
Sbjct: 571 LFEPKGRPEDEDNEFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIV 630
Query: 611 LLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEA-GVSP 669
LLCVDCHE+AH+AAEKYK++I+ EFGIPLF+ K+ +S S S GVSP
Sbjct: 631 LLCVDCHEIAHSAAEKYKRRIAEEFGIPLFVQKIMNSGDISLITNTSVSEDKLNGTGVSP 690
Query: 670 LQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHA 729
LQLRTAAMALL HG TMP R EEL +IV YYGGR+++ EDLE ALLVGMSP ERRR
Sbjct: 691 LQLRTAAMALLRHGSTMPLKRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSPHERRRLE 750
Query: 730 KKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADNVLG---LHAIETQKSGEKEG 786
KK+G S + T ++ ++ + D+ G HA+ + G
Sbjct: 751 KKKGYSFRAQAQT-------------IIRKSSSNTISEDSGHGSENCHALSARFPEVGTG 797
Query: 787 RSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSV-------------- 832
+ E E T + ++ L S + + + + S D+V
Sbjct: 798 SNGQQEFDE----TGNQNQLENLTLSQGSSSLPVSMEDTTSDHDTVTLETDTEQQARGAC 853
Query: 833 --GNVDDECENSSVQNGFGSSSPTPNS-KVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ 889
GN D+ E S N S + N+ K+SLLGHG HGKQVV+ L GE+ + QFCQ
Sbjct: 854 TPGNSHDDKEQSICDNS--SQVISKNAEKISLLGHGHHGKQVVELLFSNGGEEFVNQFCQ 911
Query: 890 RWRQVFVEALHPHFLPAGWDVMHRI 914
RWRQ+FVEA+HP +LP+GW++ HR+
Sbjct: 912 RWRQIFVEAVHPRYLPSGWNINHRL 936
>gi|414886886|tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 960
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/922 (52%), Positives = 611/922 (66%), Gaps = 67/922 (7%)
Query: 29 RRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANK------------------ 70
RR + P+ +C + E KPQ FKRVLADNSYSPFKH +
Sbjct: 42 RRLGVGGRPRRAC--EEEEKPQDRFKRVLADNSYSPFKHPRRKSAQLGSAEGEAPLPPPQ 99
Query: 71 EKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
E S HP+E EIT+LL+NP F D + S ++ WV T++QL LA L +E
Sbjct: 100 ELSQKGHPFEEEITSLLKNPPGFHSFMLCDQCPEMSATYNWVHTETQLEHLARLLGEERA 159
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVDTEQHS+RSFLG+TAL+QIST+ EDYL+DTIALHD + IL+P FA+ +CK+FHG+D
Sbjct: 160 FAVDTEQHSIRSFLGYTALMQISTQNEDYLIDTIALHDVMGILRPVFANSSICKIFHGAD 219
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
ND++WLQRDFHIYVVN+FDTAKACE+L KPQKSLAYLLE YC V T+K +QREDWR RPL
Sbjct: 220 NDILWLQRDFHIYVVNMFDTAKACEILLKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPL 279
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
EM++YA+TDAHYLLYIA CL +EL + +Y DK NF EAS RSN VC+Q+Y+
Sbjct: 280 TPEMIEYARTDAHYLLYIANCLASEL----HAKAYTSSDKINFFFEASHRSNMVCMQLYS 335
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
KEIES PG ++A+SI R L G S SS +DLV + CAWRDLMAR+HDESLR+VL
Sbjct: 336 KEIESPPGASSATSILSRNLQTHGFDSKKSSEVKDLVWKFCAWRDLMARMHDESLRYVLP 395
Query: 371 DQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNV 430
DQAI ALA P T+V+ IA+ D + ++ SL SPSP+V +H+ ++ + +
Sbjct: 396 DQAIAALAVSLPKGPTEVFAVIAETDLSIS--SMYPSLSSPSPLVVAHVKELCYLLDDIT 453
Query: 431 ENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKVSRQVAK 490
++D I + L+K P+G C LSV+NY L + LK Q++ F +G K++ K
Sbjct: 454 TSMDSIFKSLLEKYKDPSGLCRLSVYNYNL--ITHLSLK-QTSMFSVAPSGKKLTALPNK 510
Query: 491 KASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIML 550
K SRDLF++KFSCKSPVYHNCRIYA+DGRLLCYCDRKKLEWY+ R+LAKL+E++PPAIML
Sbjct: 511 KVSRDLFIKKFSCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIENSPPAIML 570
Query: 551 LFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIV 610
LFEPKGRPEDE NEFYIQSKKNICV CGE +HY+RYRIIPSCYR+HFPE LKSHRSHDIV
Sbjct: 571 LFEPKGRPEDEDNEFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIV 630
Query: 611 LLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEA-GVSP 669
LLCVDCHE+AH+AAEKYK++I+ EFGIPLF+ K+ +S S S GVSP
Sbjct: 631 LLCVDCHEIAHSAAEKYKRRIAEEFGIPLFVQKIMNSGDISLITNTSVSEDKLNGTGVSP 690
Query: 670 LQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHA 729
LQLRTAAMALL HG TMP R EEL +IV YYGGR+++ EDLE ALLVGMSP ERRR
Sbjct: 691 LQLRTAAMALLRHGSTMPLKRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSPHERRRLE 750
Query: 730 KKRGLSLKMSKPTDFPDRQQDSYPAVMVESATMDATKADNVLG---LHAIETQKSGEKEG 786
KK+G S + T ++ ++ + D+ G HA+ + G
Sbjct: 751 KKKGYSFRAQAQT-------------IIRKSSSNTISEDSGHGSENCHALSARFPEVGTG 797
Query: 787 RSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSV-------------- 832
+ E E T + ++ L S + + + + S D+V
Sbjct: 798 SNGQQEFDE----TGNQNQLENLTLSQGSSSLPVSMEDTTSDHDTVTLETDTEQQARGAC 853
Query: 833 --GNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQR 890
GN D+ E S N S K+SLLGHG HGKQVV+ L GE+ + QFCQR
Sbjct: 854 TPGNSHDDKEQSICDNSSQVISKNAE-KISLLGHGHHGKQVVELLFSNGGEEFVNQFCQR 912
Query: 891 WRQVFVEALHPHFLPAGWDVMH 912
WRQ+FVEA+HP +LP+GW++ H
Sbjct: 913 WRQIFVEAVHPRYLPSGWNINH 934
>gi|222637126|gb|EEE67258.1| hypothetical protein OsJ_24424 [Oryza sativa Japonica Group]
Length = 949
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/912 (51%), Positives = 592/912 (64%), Gaps = 99/912 (10%)
Query: 44 QSEPKPQHNFKRVLADNSYSPFKH--------------------ANKEKSSGSHPYELEI 83
+ E KPQ F+RV+ADNSYS FKH ++E S HP+E EI
Sbjct: 60 EEEEKPQARFRRVVADNSYSAFKHLRRQGAGPVGSGHHGSEAQPTSQESSQKVHPFEEEI 119
Query: 84 TALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRS 142
T+LL NP P+F +F D + S S+ WVET +QL +LA L E FAVDTEQHSLRS
Sbjct: 120 TSLLNNP-PDFQNFMPGDRCPEMSTSYNWVETDAQLEDLARLLDDEKAFAVDTEQHSLRS 178
Query: 143 FLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
FLG+TAL+QIST+K DYL+DTIALHD +SIL+P FA+P +CK+FHG+DNDV+WLQRDFHI
Sbjct: 179 FLGYTALMQISTQKADYLIDTIALHDVMSILRPVFANPSICKIFHGADNDVLWLQRDFHI 238
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
YVVN+FDTAKACEVLSKPQKSLAYLLE YCGV T+K +QREDWR RPL EM+QYA+ DA
Sbjct: 239 YVVNMFDTAKACEVLSKPQKSLAYLLELYCGVTTDKTMQREDWRLRPLTPEMIQYARCDA 298
Query: 263 HYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAA 322
HYLLYIA CL +EL + + S P+DK NF EAS RSN
Sbjct: 299 HYLLYIANCLASELHAKTYDASDSPNDKINFFFEASHRSNM------------------- 339
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
DLV ++CAWRDLMAR+HDESLR+VLSDQAI +LA P
Sbjct: 340 ----------------------DLVWKICAWRDLMARMHDESLRYVLSDQAIASLAVSVP 377
Query: 383 ANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQ 442
T+V + I + ++ + SLP PSP+V +H +++ + + ++D I L+
Sbjct: 378 RGPTEVCSAILETETSNS--TVYPSLPPPSPIVVAHAEELRYLIEDITVSMDAIFKNLLE 435
Query: 443 KCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKV-SRQVAKKASRDLFVQKF 501
K P+ C LSVFNY L ++ LK Q N F + +G K+ KKASR+LF++KF
Sbjct: 436 KYKDPSRLCRLSVFNYNLVSQ--LSLK-QKNMFSFASSGEKLLMAPTNKKASRELFIKKF 492
Query: 502 SCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDE 561
SCKSPVYHNCRIYA+DGRLLCYCDRKKLEWY+ R+LAKL+EDNPPAI+LLFEPKGRPEDE
Sbjct: 493 SCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIEDNPPAIVLLFEPKGRPEDE 552
Query: 562 GNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAH 621
N+FYIQSKKNICV CGE +HY+RYRIIPSCYR+HFPE LKSHRSHDIVLLCVDCHE+AH
Sbjct: 553 DNDFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAH 612
Query: 622 AAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEA-GVSPLQLRTAAMALL 680
+AAEKYK+QI+ EFG+PLF+ K+ +S G S S GVSPLQLRTAAMALL
Sbjct: 613 SAAEKYKRQIAKEFGVPLFVQKILNSGDISLIAGASLSEDKSNGTGVSPLQLRTAAMALL 672
Query: 681 HHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHAKKRGLSLKMSK 740
HG MP R EEL +IV YYGGR+++ EDLE ALLVGMSP ERRRH+KK G S +
Sbjct: 673 RHGSNMPLKRYEELMQIVKSYYGGRDVTPEDLEMALLVGMSPNERRRHSKKNGFSYRSQA 732
Query: 741 PT----------------DFPDRQQDSYPAVMVESATM-DATKADNVLGL--HAIETQKS 781
D + + + VE+ + D + +N LG+ H +
Sbjct: 733 QNVIRKSNSNGIVENNEHDPENGYAEQFSKNGVENNSHPDIDENNNQLGIDEHTSQPGSG 792
Query: 782 GEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSVGNVD-DECE 840
G K +L++ PP +N D + + ++ + S + + G++D D C
Sbjct: 793 GNKIHGPTLSKESTIYPPRMANPISDSSI------EADTVQQASLGGNPANGDLDRDPCG 846
Query: 841 NSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALH 900
+++ + + K+SLLGHG HGKQVV+ LL GE+ I QF QRWRQVFV +LH
Sbjct: 847 SNNSNQAIPQNG---DKKISLLGHGHHGKQVVELLLSNGGEEAINQFSQRWRQVFVASLH 903
Query: 901 PHFLPAGWDVMH 912
P +LP+GW++ H
Sbjct: 904 PRYLPSGWNIKH 915
>gi|218199707|gb|EEC82134.1| hypothetical protein OsI_26176 [Oryza sativa Indica Group]
Length = 949
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/912 (51%), Positives = 591/912 (64%), Gaps = 99/912 (10%)
Query: 44 QSEPKPQHNFKRVLADNSYSPFKH--------------------ANKEKSSGSHPYELEI 83
+ E KPQ F+RV+ADNSYS FKH ++E S HP+E EI
Sbjct: 60 EEEEKPQARFRRVVADNSYSAFKHLRRQGAGPVGSGHHGSEAQPTSQESSQKVHPFEEEI 119
Query: 84 TALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRS 142
T+LL NP P+F +F D + S S+ WVET +QL +LA L E FAVDTEQHSLRS
Sbjct: 120 TSLLNNP-PDFQNFMPGDRCPEMSTSYNWVETDAQLEDLARLLDDEKAFAVDTEQHSLRS 178
Query: 143 FLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
FLG+TAL+QIST+K DYL+DTIALHD +SIL+P FA+P +CK+FHG+DNDV+WLQRDFHI
Sbjct: 179 FLGYTALMQISTQKADYLIDTIALHDVMSILRPVFANPSICKIFHGADNDVLWLQRDFHI 238
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
YVVN+FDTAKACEVLSKPQKSLAYLLE YCGV T+K +QREDWR RPL EM+QYA+ DA
Sbjct: 239 YVVNMFDTAKACEVLSKPQKSLAYLLELYCGVTTDKTMQREDWRLRPLTPEMIQYARCDA 298
Query: 263 HYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAA 322
HYLLYIA CL +EL + + S P+DK NF EAS RSN
Sbjct: 299 HYLLYIANCLASELHAKTYDASDSPNDKINFFFEASHRSNM------------------- 339
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
DLV ++CAWRDLMAR+HDESLR+VLSDQAI +LA P
Sbjct: 340 ----------------------DLVWKICAWRDLMARMHDESLRYVLSDQAIASLAVSVP 377
Query: 383 ANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQ 442
T+V + I + ++ + SLP PSP+V +H +++ + + ++D I L+
Sbjct: 378 RGPTEVCSAILETETSNS--TVYPSLPPPSPIVVAHAEELRYLIEDITVSMDAIFKNLLE 435
Query: 443 KCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKV-SRQVAKKASRDLFVQKF 501
K P+ C LSVFNY L ++ LK Q N F + +G K+ KKASR+LF++KF
Sbjct: 436 KYKDPSRLCRLSVFNYNLVSQ--LSLK-QKNMFSFASSGEKLLMAPTNKKASRELFIKKF 492
Query: 502 SCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDE 561
SCKSPVYHNCRIYA+DGRLLCYCDRKKLEWY+ R+LAKL+EDNPPAI LLFEPKGRPEDE
Sbjct: 493 SCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIEDNPPAIALLFEPKGRPEDE 552
Query: 562 GNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAH 621
N+FYIQSKKNICV CGE +HY+RYRIIPSCYR+HFPE LKSHRSHDIVLLCVDCHE+AH
Sbjct: 553 DNDFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAH 612
Query: 622 AAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEA-GVSPLQLRTAAMALL 680
+AAEKYK+QI+ EFG+PLF+ K+ +S G S S GVSPLQLRTAAMALL
Sbjct: 613 SAAEKYKRQIAKEFGVPLFVQKILNSGDISLIAGASLSEDKSNGTGVSPLQLRTAAMALL 672
Query: 681 HHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHAKKRGLSLKMSK 740
HG MP R EEL +IV YYGGR+++ EDLE ALLVGMSP ERRRH+KK G S +
Sbjct: 673 RHGSNMPLKRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSPNERRRHSKKNGFSYRSQA 732
Query: 741 PT----------------DFPDRQQDSYPAVMVESATM-DATKADNVLGL--HAIETQKS 781
D + + + VE+ + D + +N LG+ H +
Sbjct: 733 QNVIRKSNSNGIVENNEHDPENGYAEQFSKNGVENNSHPDIDENNNQLGIDEHTSQPGSG 792
Query: 782 GEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSKVSDSKDDSVGNVD-DECE 840
G K +L++ PP +N D + + ++ + S + + G++D D C
Sbjct: 793 GNKIHGPTLSKESTIYPPRMANPISDSSM------EADTVQQASLGGNPANGDLDRDPCG 846
Query: 841 NSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALH 900
+++ + + K+SLLGHG HGKQVV+ LL GE+ I QF QRWRQVFV +LH
Sbjct: 847 SNNSNQAIPQNG---DKKISLLGHGHHGKQVVELLLSNGGEEAINQFSQRWRQVFVASLH 903
Query: 901 PHFLPAGWDVMH 912
P +LP+GW++ H
Sbjct: 904 PRYLPSGWNIKH 915
>gi|357116782|ref|XP_003560156.1| PREDICTED: uncharacterized protein LOC100837522 [Brachypodium
distachyon]
Length = 909
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/715 (60%), Positives = 522/715 (73%), Gaps = 34/715 (4%)
Query: 44 QSEPKPQHNFKRVLADNSYSPFKHANK-------------------EKSSGSHPYELEIT 84
+ E KPQ FKRV ADNSYSPFKH + E S HP+ EIT
Sbjct: 57 EEEEKPQARFKRVFADNSYSPFKHLRRQGADPVADGQRGDAQPQPLESSQKMHPFGEEIT 116
Query: 85 ALLENPRPEFDFSNVDLDLQ---RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLR 141
+LL+NP F N L Q S S+ WV T +QL LA LS E FAVDTEQHSLR
Sbjct: 117 SLLDNPTGFSTFCNFTLSSQCPEMSTSYNWVNTVAQLEHLAKLLSDEEVFAVDTEQHSLR 176
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
SFLG+TAL+QIST+KEDYL+DTIALHD + IL+P F+ P +CK+FHG+DNDV+WLQRDFH
Sbjct: 177 SFLGYTALVQISTQKEDYLIDTIALHDAMGILRPVFSSPSICKIFHGADNDVLWLQRDFH 236
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
IYVVN+FDTAKACEVLSKPQKSLAYLLE YCGV T+K +QREDWR RPL EM++YA++D
Sbjct: 237 IYVVNIFDTAKACEVLSKPQKSLAYLLEIYCGVTTDKTMQREDWRVRPLTPEMVEYARSD 296
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
AHYLL IA CL +EL + ++ PD K NF LEASRRSN VC+Q+Y KEIE PG ++
Sbjct: 297 AHYLLKIANCLASELHAKACDS---PDGKTNFFLEASRRSNMVCMQLYAKEIECPPGASS 353
Query: 322 ASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKA 381
A+SI R L G S SS +DLVR+ CAWRDLMAR+HDESLR++LSDQAI +LA
Sbjct: 354 AASILSRNLQTHGLDSKKSSEVKDLVRKFCAWRDLMARMHDESLRYILSDQAIASLAVSV 413
Query: 382 PANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANL 441
P ++ T IA+ + SSL SPSP+V +H++++ + + ++DD+ + L
Sbjct: 414 PKGPMEMCTVIAETELSS--STTHSSLSSPSPIVVAHIEELCYLIEDTTVSMDDLFTSLL 471
Query: 442 QKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKV-SRQVAKKASRDLFVQK 500
K P+G C LSV+NY L ++ + + Q+N FV+ +G K+ + KKASR+ F++K
Sbjct: 472 GKYKEPSGLCRLSVYNYNLVSQLSLK---QTNMFVFASSGEKLLTAPPNKKASRESFIKK 528
Query: 501 FSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPED 560
FSCKSPVYHNCRIYA+DGRLLCYCDRKKLEWY+ RDLAKLVEDNPP IMLLFEPKGRPED
Sbjct: 529 FSCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRDLAKLVEDNPPGIMLLFEPKGRPED 588
Query: 561 EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVA 620
E NEFYIQSKKNICV CGE +HY+RYRIIPSCYR+HFPE LKSHRSHDIVLLCVDCHE+A
Sbjct: 589 EDNEFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIA 648
Query: 621 HAAAEKYKKQISAEFGIPLFIHKVADS--RKAEARPGFSASITNFEAGVSPLQLRTAAMA 678
H+AAEKYK++++ E GIPLF+ ++ +S R S +N +GVSPL LRTAAMA
Sbjct: 649 HSAAEKYKRRLAEELGIPLFVQRIVNSGDRSLITDASVSDEKSN-GSGVSPLLLRTAAMA 707
Query: 679 LLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHAKKRG 733
LL HG MPS R EEL +IV YYGGR+++ EDLE ALLVGMSP ERRR KK+G
Sbjct: 708 LLRHGTNMPSKRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSPHERRRLEKKKG 762
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
+K+SLLGHG HGKQVV+ LL GE+ + QFCQRWR VFVEA+HP +LP+GW++ H
Sbjct: 830 TKISLLGHGHHGKQVVELLLANGGEEAVHQFCQRWRHVFVEAVHPRYLPSGWNINH 885
>gi|50508632|dbj|BAD31028.1| polymyositis/scleroderma autoantigen 2 -like [Oryza sativa Japonica
Group]
gi|50509503|dbj|BAD31184.1| polymyositis/scleroderma autoantigen 2 -like [Oryza sativa Japonica
Group]
Length = 1031
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/750 (51%), Positives = 486/750 (64%), Gaps = 77/750 (10%)
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
+FHG+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQKSLAYLLE YCGV T+K +QRED
Sbjct: 303 IFHGADNDVLWLQRDFHIYVVNMFDTAKACEVLSKPQKSLAYLLELYCGVTTDKTMQRED 362
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPL EM+QYA+ DAHYLLYIA CL +EL + + S P+DK NF EAS RSN
Sbjct: 363 WRLRPLTPEMIQYARCDAHYLLYIANCLASELHAKTYDASDSPNDKINFFFEASHRSN-- 420
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
DLV ++CAWRDLMAR+HDES
Sbjct: 421 ---------------------------------------MDLVWKICAWRDLMARMHDES 441
Query: 365 LRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVER 424
LR+VLSDQAI +LA P T+V + I + ++ + SLP PSP+V +H +++
Sbjct: 442 LRYVLSDQAIASLAVSVPRGPTEVCSAILETETSNS--TVYPSLPPPSPIVVAHAEELRY 499
Query: 425 QVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKV 484
+ + ++D I L+K P+ C LSVFNY L ++ LK Q N F + +G K+
Sbjct: 500 LIEDITVSMDAIFKNLLEKYKDPSRLCRLSVFNYNLVSQ--LSLK-QKNMFSFASSGEKL 556
Query: 485 -SRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVED 543
KKASR+LF++KFSCKSPVYHNCRIYA+DGRLLCYCDRKKLEWY+ R+LAKL+ED
Sbjct: 557 LMAPTNKKASRELFIKKFSCKSPVYHNCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIED 616
Query: 544 NPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKS 603
NPPAI+LLFEPKGRPEDE N+FYIQSKKNICV CGE +HY+RYRIIPSCYR+HFPE LKS
Sbjct: 617 NPPAIVLLFEPKGRPEDEDNDFYIQSKKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKS 676
Query: 604 HRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNF 663
HRSHDIVLLCVDCHE+AH+AAEKYK+QI+ EFG+PLF+ K+ +S G S S
Sbjct: 677 HRSHDIVLLCVDCHEIAHSAAEKYKRQIAKEFGVPLFVQKILNSGDISLIAGASLSEDKS 736
Query: 664 EA-GVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSP 722
GVSPLQLRTAAMALL HG MP R EEL +IV YYGGR+++ EDLE ALLVGMSP
Sbjct: 737 NGTGVSPLQLRTAAMALLRHGSNMPLKRYEELMQIVKSYYGGRDVTPEDLEMALLVGMSP 796
Query: 723 RERRRHAKKRGLSLKM----------------SKPTDFPDRQQDSYPAVMVESATM-DAT 765
ERRRH+KK G S + + D + + + VE+ + D
Sbjct: 797 NERRRHSKKNGFSYRSQAQNVIRKSNSNGIVENNEHDPENGYAEQFSKNGVENNSHPDID 856
Query: 766 KADNVLGL--HAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNSTSK 823
+ +N LG+ H + G K +L++ PP +N D + + ++ +
Sbjct: 857 ENNNQLGIDEHTSQPGSGGNKIHGPTLSKESTIYPPRMANPISDSSI------EADTVQQ 910
Query: 824 VSDSKDDSVGNVD-DECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGED 882
S + + G++D D C +++ + + K+SLLGHG HGKQVV+ LL GE+
Sbjct: 911 ASLGGNPANGDLDRDPCGSNNSNQAIPQNG---DKKISLLGHGHHGKQVVELLLSNGGEE 967
Query: 883 GIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
I QF QRWRQVFV +LHP +LP+GW++ H
Sbjct: 968 AINQFSQRWRQVFVASLHPRYLPSGWNIKH 997
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 105/160 (65%), Gaps = 22/160 (13%)
Query: 44 QSEPKPQHNFKRVLADNSYSPFKH--------------------ANKEKSSGSHPYELEI 83
+ E KPQ F+RV+ADNSYS FKH ++E S HP+E EI
Sbjct: 60 EEEEKPQARFRRVVADNSYSAFKHLRRQGAGPVGSGHHGSEAQPTSQESSQKVHPFEEEI 119
Query: 84 TALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRS 142
T+LL NP P+F +F D + S S+ WVET +QL +LA L E FAVDTEQHSLRS
Sbjct: 120 TSLLNNP-PDFQNFMPGDRCPEMSTSYNWVETDAQLEDLARLLDDEKAFAVDTEQHSLRS 178
Query: 143 FLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGV 182
FLG+TAL+QIST+K DYL+DTIALHD +SIL+P FA+P +
Sbjct: 179 FLGYTALMQISTQKADYLIDTIALHDVMSILRPVFANPSI 218
>gi|168005501|ref|XP_001755449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693577|gb|EDQ79929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 824
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/890 (46%), Positives = 519/890 (58%), Gaps = 105/890 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKH--ANKEKSSGSHPYELEITALLENPRPEFD--FSNVDLDL 103
KPQ FKRVLADN SPF+H + S HPYE I L ENP F +S+ L
Sbjct: 1 KPQKRFKRVLADNFDSPFQHFPSPLTGSQVGHPYEDVIRGLAENPNLSFANYYSDNVLPP 60
Query: 104 QRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT 163
+WV+T+SQL L + L E VD E H +RSF GF LIQIST DYLVD
Sbjct: 61 GMEGPCLWVQTRSQLEALVDVLKGEKEIGVDIEHHHVRSFRGFIPLIQISTYSTDYLVDA 120
Query: 164 IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
IALHD++ +L P FA+P + K+FHG+DND +WLQRDFHIY+VNLFDTA+AC+VL KPQ+S
Sbjct: 121 IALHDDMHLLHPIFANPAILKIFHGADNDSLWLQRDFHIYIVNLFDTARACDVLGKPQRS 180
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
LAYLL+ YCGV+T K QR DWR RPLPAEM YA+TDAHYLLYIA+C+ A L Q N
Sbjct: 181 LAYLLQLYCGVSTKKIYQRSDWRVRPLPAEMEIYARTDAHYLLYIAQCMRANLVQACNTP 240
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV--SSISS 341
S D++ +LE RRSN VC Q+Y KE A +SI RL N +
Sbjct: 241 SLLNDNQ--LLLEVVRRSNAVCQQLYEKEGVGDSSSAVVASILGRLYNNSNSAMRGEEDA 298
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD----- 396
+ LV++L WRD +AR DESLRFV+SD A++A+A + P + +TI D
Sbjct: 299 YLRRLVQKLVEWRDALARAEDESLRFVMSDAALLAVAKERPLTEESILSTIISTDELSRA 358
Query: 397 SDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVEN-LDDILLANLQKCLGPNGSCPLSV 455
S+ L LPSPSPVV H+ + + + E+ DD+ S
Sbjct: 359 SETAVPGL-QPLPSPSPVVQEHVGLLCDILWDFAEDPKDDVWPWR-------------ST 404
Query: 456 FNYVLPAKNNWE-----LKNQSNKFVYKQNGVKVSRQVAKK-------ASRDLFVQKFSC 503
N PA + +E L S F++ ++ V+ R + KK +R FV+KFSC
Sbjct: 405 TNLSNPADSLYEKFCSILHIPSISFLWGKSWVR--RTIPKKWRVGNAEQARLQFVKKFSC 462
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
K+PVYHNCRIYA DG + ++ Y+ R LA+ + + PPAI LLFEPKGRPEDE N
Sbjct: 463 KAPVYHNCRIYAGDGHVRSAMFLRR---YIKRGLAEDMNEEPPAIRLLFEPKGRPEDENN 519
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
EFYI K N CV CGE +HYLRYRIIPSCYR HFPE LKSHRSHDIVLLCVDCHEVAH A
Sbjct: 520 EFYISRKSNRCVGCGESSHYLRYRIIPSCYRQHFPEHLKSHRSHDIVLLCVDCHEVAHKA 579
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEA-GVSPLQLRTAAMALLHH 682
AEK+K++I +FG+PLF H+V D A + + E+ GVSPLQLRTAAMAL H
Sbjct: 580 AEKHKREIVVQFGVPLFAHRVVDGGNETAGSNEVSFVAEGESRGVSPLQLRTAAMALTRH 639
Query: 683 GPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPT 742
GPTMP RR++L I+ YYGGREI EDL+ AL+VGM PRE RR KKR
Sbjct: 640 GPTMPVERRKQLEEILKTYYGGREIGPEDLKAALIVGMGPREHRRFLKKR---------- 689
Query: 743 DFPDRQQDSYPAVMVESATMDATKADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCS 802
++ Q+ RS +S ++K T
Sbjct: 690 ---------------------------------LQRQQRASNTNRSEDVDSVDTK--THG 714
Query: 803 NGGIDQLVFSTIWKKMNSTSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLL 862
+ + Q+V I D+ G+ D++ + S V S +K SLL
Sbjct: 715 SVQMSQIVSDAI-------------NTDASGS-DEDIKESLVAEPSRRHSRRSINKESLL 760
Query: 863 GHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
GHGPHGKQVVD ++ + G++GIRQFCQ WR VFV+AL P FLP GWDV H
Sbjct: 761 GHGPHGKQVVDIIIEKEGDEGIRQFCQLWRAVFVDALQPAFLPPGWDVTH 810
>gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
Length = 1449
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/689 (52%), Positives = 452/689 (65%), Gaps = 53/689 (7%)
Query: 46 EPKPQHNFKRVLADNSYSPFKHAN-KEKSSGSHPYELEITALLENP-RPEFDFSNVDLDL 103
E KPQ FKR+LADN+ PF H K SHPY EI ALLE P P F+ ++
Sbjct: 697 EIKPQKRFKRILADNTPLPFVHLEIPGKGEDSHPYGDEIRALLEGPVLPLFETEQPLAEM 756
Query: 104 QRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT 163
+ + FVW+ETK L +LA LS+E FAVDTEQHS+RSFLGFTALIQIST K DYL+D
Sbjct: 757 E--EPFVWIETKEALEDLAQVLSEESEFAVDTEQHSIRSFLGFTALIQISTYKRDYLIDA 814
Query: 164 IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
IALHDE+ L+P FA+ +CKVFHG+D+D++WLQRDFHIYVVNLFDTA+AC+VL KPQ+S
Sbjct: 815 IALHDEMETLRPVFANASICKVFHGADSDILWLQRDFHIYVVNLFDTARACDVLGKPQRS 874
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
LAYLL+TYC ++TNK Q+ DWRQRPLP ++L YA++DAH+LLYIA+ L +EL Q +
Sbjct: 875 LAYLLQTYCNISTNKAFQKSDWRQRPLPEDILLYARSDAHFLLYIARKLYSELLQGETDL 934
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
+ P + A+RRS+ +CLQ+Y K+ S +AA+S+F + +S+
Sbjct: 935 ANAP------LQMATRRSHLICLQLYEKDASS---ASAAASLFSKFQESNLDKPREASMR 985
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLN 403
+ L R LC WRD +AR+ DESLRFVLSD AI+A+A P +VY +I AD +
Sbjct: 986 RRL-RLLCEWRDAVARIEDESLRFVLSDAAIVAIARTLPRTGKEVYRSIHAADMATSTDS 1044
Query: 404 LSSS-LPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPA 462
+S LPSPSP+V H+ + + ++ N + +K ++
Sbjct: 1045 SKTSLLPSPSPLVKRHISSLILAIKDSAANATSGEQRDDKKGR-----------RFLFNK 1093
Query: 463 KNNWELKNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLC 522
++N ELK R FV+KFSCK VY NCRIYA DGRLLC
Sbjct: 1094 RSNSELK------------------------RTQFVKKFSCKGLVYENCRIYAGDGRLLC 1129
Query: 523 YCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNH 582
YCDR+KLEWYL R LA+ + + PPAI L FEPKGRPEDE NEFYIQSK N CV CGE +H
Sbjct: 1130 YCDRRKLEWYLQRGLAERLNEEPPAIRLCFEPKGRPEDENNEFYIQSKSNQCVGCGESSH 1189
Query: 583 YLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIH 642
YLRYRIIPSCYR HFPE LKSHRSHDIVLLCVDCHE AH AAEKYK I+ E GIPLF
Sbjct: 1190 YLRYRIIPSCYRQHFPEYLKSHRSHDIVLLCVDCHEKAHRAAEKYKHVIALESGIPLFAR 1249
Query: 643 KVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYY 702
K+ + E G S+ E GV PLQLR AAMALL HGP MP +RR EL ++ Y+
Sbjct: 1250 KIIAAEDVE---GSGYSVIESETGVPPLQLRNAAMALLCHGPDMPESRRAELEMVISGYF 1306
Query: 703 GGREISQEDLERALLVGMSPRERRRHAKK 731
GGR+I + D++ A LVG+ PR ++R +K
Sbjct: 1307 GGRQIDEADMKAAALVGIDPRGKKRLTRK 1335
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 834 NVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQ 893
N + E+ V+NG +P K+SLLGHG HGK+VV+ + GEDGIR F QRWR
Sbjct: 1347 NSNAAVESPVVENGEPGKNPKKTHKISLLGHGLHGKKVVEKIWEGQGEDGIRDFIQRWRM 1406
Query: 894 VFVEALHPHFLPAGWDVMHRI 914
VFV+A+HP +LP GW+V HR+
Sbjct: 1407 VFVDAVHPGYLPTGWEVTHRL 1427
>gi|67848464|gb|AAY82265.1| hypothetical protein At2g32420 [Arabidopsis thaliana]
Length = 327
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/327 (68%), Positives = 258/327 (78%), Gaps = 11/327 (3%)
Query: 1 MEKKAKIKIAITIASLAAISILF-TRQQRRRRKLNQCPQYS-CYLQSEPKPQHNFKRVLA 58
ME K K K+ IT+ASL A++ILF T +RRR++ Q S CYL SE KPQ FKRVLA
Sbjct: 1 MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSELKPQFGFKRVLA 60
Query: 59 DNSYSPFKH--------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV 110
DNSYS FKH ++ EK S HPYE EIT LLENP+ EF F + L+ SDS+V
Sbjct: 61 DNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYV 120
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WVET+SQL ELA L+KE FAVDTEQHSLRSFLGFTALIQIST +ED+LVDTIALHD +
Sbjct: 121 WVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVM 180
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
SIL+P F+DP +CKVFHG+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET
Sbjct: 181 SILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLET 240
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
CGVATNK LQREDWRQRPL EM++YA+ DAHYLLYIA L ELKQ ++S PDD+
Sbjct: 241 VCGVATNKLLQREDWRQRPLSEEMVRYARXDAHYLLYIADSLTTELKQLATDSS-SPDDR 299
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYP 317
F+F+LEASRRSN CLQ+YTKE E +P
Sbjct: 300 FHFLLEASRRSNMTCLQLYTKETEDFP 326
>gi|242050364|ref|XP_002462926.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
gi|241926303|gb|EER99447.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
Length = 760
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/350 (56%), Positives = 257/350 (73%), Gaps = 5/350 (1%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
S ++ WV+T++QL LA L +E FAVDTEQHS+RSFLG+TAL+QIST+ +DYL+DTIA
Sbjct: 10 STTYNWVDTEAQLEHLARLLGEERAFAVDTEQHSIRSFLGYTALMQISTQNDDYLIDTIA 69
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
LHD + IL+P FA+ +CK+FHG+DNDV+WLQRDFHIYVVN+FDTAKACE LSKPQKSLA
Sbjct: 70 LHDVMGILRPVFANSSICKIFHGADNDVLWLQRDFHIYVVNMFDTAKACETLSKPQKSLA 129
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
YLLE YC V T+K +QREDWR RPL EM++YA+TDAHYLLYIA CL +EL + + S
Sbjct: 130 YLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYARTDAHYLLYIANCLASELHAKACDTS- 188
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
DK NF EAS RSN VC+Q+Y KEIE PG ++A+SI R L G S SS +D
Sbjct: 189 --SDKINFFFEASHRSNMVCMQLYAKEIECPPGASSAASILSRNLQTHGLDSKKSSEVKD 246
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLS 405
LV + CAWRDLMAR+HDESLR+VLSDQAI ALA P T+V+ I++ D + ++
Sbjct: 247 LVWKFCAWRDLMARMHDESLRYVLSDQAIAALAVSLPKGPTEVFAVISETDLSIS--SMY 304
Query: 406 SSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGPNGSCPLSV 455
SL SPSP+V +H++++ + + +++ I + L+K P+G C L V
Sbjct: 305 PSLSSPSPLVVAHVEELCYLLDDITTSMEGIFKSLLEKYKDPSGLCRLYV 354
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/392 (52%), Positives = 253/392 (64%), Gaps = 19/392 (4%)
Query: 532 YLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPS 591
Y+ R+LAKL+ED+PPAIMLLFEPKGRPEDE NEFYIQSKKNICV CGE +HY+RYRIIPS
Sbjct: 353 YVQRNLAKLIEDSPPAIMLLFEPKGRPEDEDNEFYIQSKKNICVGCGEKSHYIRYRIIPS 412
Query: 592 CYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAE 651
CYR+HFPE LKSHRSHDIVLLCVDCHE+AH+AAEKYK++I+ EFGIPLF+ K+ +S
Sbjct: 413 CYRMHFPEHLKSHRSHDIVLLCVDCHEIAHSAAEKYKRRIAEEFGIPLFVQKIMNSGDIS 472
Query: 652 ARPGFSASITNFEA-GVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQE 710
S S GVSPLQLRTAAMALL HG TMP R EEL +IV YYGGR+++ E
Sbjct: 473 LITSTSVSEDKLNGTGVSPLQLRTAAMALLRHGSTMPLKRCEELMQIVKSYYGGRDVTPE 532
Query: 711 DLERALLVGMSPRERRRHAKKRGLSL---------KMSKPTDFPDRQQDSYPA-VMVESA 760
DLE ALLVGMSP ERRR KK+G S K S T D S + + E
Sbjct: 533 DLEVALLVGMSPHERRRLEKKKGYSFRAQAQNIIRKSSSNTISEDSGHGSENSHSLSERF 592
Query: 761 TMDATKADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQLVFSTIWKKMNS 820
D T+++ E+Q E +L++ S P + + D T+ K ++
Sbjct: 593 PEDGTESNGQQEFDETESQNQLEN---LTLSQVGSSLPVSMEDTTFDH---DTVTLKTDT 646
Query: 821 TSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYG 880
+ + +VD E S N + S K+SLLGHG HGKQVV+ LL G
Sbjct: 647 KQQARGTCTPGNSHVDREL--SIRDNSSQAISKNAEKKISLLGHGHHGKQVVELLLSNGG 704
Query: 881 EDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
E+ I QFCQRWRQ+FVEA+HP +LP+GW++ H
Sbjct: 705 EEAINQFCQRWRQIFVEAVHPRYLPSGWNINH 736
>gi|3831454|gb|AAC69936.1| hypothetical protein [Arabidopsis thaliana]
Length = 237
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/224 (72%), Positives = 182/224 (81%)
Query: 68 ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
N EK S HPYE EIT LLENP+ EF F + L+ SDS+VWVET+SQL ELA L+K
Sbjct: 14 TNAEKPSNGHPYETEITVLLENPQIEFGFLRGECSLEMSDSYVWVETESQLKELAEILAK 73
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
E FAVDTEQHSLRSFLGFTALIQIST +ED+LVDTIALHD +SIL+P F+DP +CKVFH
Sbjct: 74 EQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIALHDVMSILRPVFSDPNICKVFH 133
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+DNDV+WLQRDFHIYVVN+FDTAKACEVLSKPQ+SLAYLLET CGVATNK LQREDWRQ
Sbjct: 134 GADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQ 193
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
RPL EM++YA+TDAHYLLYIA L ELKQ C + F
Sbjct: 194 RPLSEEMVRYARTDAHYLLYIADSLTTELKQLATGRHLCYGETF 237
>gi|224064982|ref|XP_002301621.1| predicted protein [Populus trichocarpa]
gi|222843347|gb|EEE80894.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/207 (75%), Positives = 174/207 (84%)
Query: 73 SSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFA 132
SS HPYE +I AL+ENP D+ + + S+VW+ET++QL +LA+ LSK FA
Sbjct: 16 SSNFHPYEADIKALIENPESLEDYYSDHQKMSEFFSYVWIETETQLKDLAHTLSKHKVFA 75
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDND 192
VDTEQHSLRSFLGFTALIQIST EDYLVDTIALHD + +L P FADP +CKVFHG+DND
Sbjct: 76 VDTEQHSLRSFLGFTALIQISTRNEDYLVDTIALHDVMGVLAPVFADPTICKVFHGADND 135
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
V+WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK LQREDWRQRPL A
Sbjct: 136 VLWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKLLQREDWRQRPLSA 195
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQ 279
EML+YAQTDAHYLLYIA CL+AELK Q
Sbjct: 196 EMLEYAQTDAHYLLYIAGCLIAELKLQ 222
>gi|302803751|ref|XP_002983628.1| hypothetical protein SELMODRAFT_48160 [Selaginella moellendorffii]
gi|300148465|gb|EFJ15124.1| hypothetical protein SELMODRAFT_48160 [Selaginella moellendorffii]
Length = 201
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 161/202 (79%), Gaps = 1/202 (0%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPY EI ALLE+P + L + + FVW+ETK L +LA LS+E FAVDTE
Sbjct: 1 HPYGDEIRALLEDPVLPLSETEQPL-AEMEEPFVWIETKEALEDLAEVLSEESEFAVDTE 59
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
QHS+RSFLGFTALIQIST K DYL+D IALHDE+ IL+P FA+ +CKVFHG+D+D++WL
Sbjct: 60 QHSIRSFLGFTALIQISTYKRDYLIDAIALHDEMEILRPVFANAAICKVFHGADSDILWL 119
Query: 197 QRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQ 256
QRDFHIYVVNLFDTA+AC+VL KPQ+SLAYLL+TYC ++TNK Q+ DWRQRPLP ++L
Sbjct: 120 QRDFHIYVVNLFDTARACDVLGKPQRSLAYLLQTYCNISTNKAFQKSDWRQRPLPEDILL 179
Query: 257 YAQTDAHYLLYIAKCLVAELKQ 278
YA+TDAH+LLYIA+ L +EL Q
Sbjct: 180 YARTDAHFLLYIARKLYSELLQ 201
>gi|414886884|tpg|DAA62898.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 194
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 144/189 (76%), Gaps = 3/189 (1%)
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+ IL+P FA+ +CK+FHG+DND++WLQRDFHIYVVN+FDTAKACE+L KPQKSLAYLLE
Sbjct: 1 MGILRPVFANSSICKIFHGADNDILWLQRDFHIYVVNMFDTAKACEILLKPQKSLAYLLE 60
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
YC V T+K +QREDWR RPL EM++YA+TDAHYLLYIA CL +EL + + S D
Sbjct: 61 VYCEVTTDKTMQREDWRLRPLTPEMIEYARTDAHYLLYIANCLASELHAKACDTS---SD 117
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
K NF EAS RSN VC+Q+Y+KEIES PG ++A+SI R L G S SS +DLV +
Sbjct: 118 KINFFFEASHRSNMVCMQLYSKEIESPPGASSATSILSRNLQTHGFDSKKSSEVKDLVWK 177
Query: 350 LCAWRDLMA 358
CAWRDLM
Sbjct: 178 FCAWRDLMV 186
>gi|361066827|gb|AEW07725.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162455|gb|AFG63883.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162456|gb|AFG63884.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162457|gb|AFG63885.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162458|gb|AFG63886.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162459|gb|AFG63887.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162460|gb|AFG63888.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162461|gb|AFG63889.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162462|gb|AFG63890.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162463|gb|AFG63891.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162465|gb|AFG63892.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162467|gb|AFG63893.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162468|gb|AFG63894.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162469|gb|AFG63895.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
gi|383162470|gb|AFG63896.1| Pinus taeda anonymous locus 0_9784_02 genomic sequence
Length = 131
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 122/131 (93%)
Query: 517 DGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVS 576
DGRLLCYCD++KL+WY+ RDLA+L+ED+PPA+ LLFEPKGRPEDE NEFYIQSKKN+CV
Sbjct: 1 DGRLLCYCDQRKLDWYIRRDLAELIEDDPPAVKLLFEPKGRPEDENNEFYIQSKKNMCVG 60
Query: 577 CGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFG 636
CGE NHYLRYRIIPSCYR+HFPE LKSHRSHDIVLLCVDCHE+AH+AAEKYK+Q++A+FG
Sbjct: 61 CGESNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAHSAAEKYKRQVAAKFG 120
Query: 637 IPLFIHKVADS 647
IPLF KV DS
Sbjct: 121 IPLFARKVVDS 131
>gi|325183710|emb|CCA18169.1| exosome complex exonuclease RRP6like protein putativ [Albugo
laibachii Nc14]
Length = 770
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 203/355 (57%), Gaps = 31/355 (8%)
Query: 47 PKPQHNFKRVLADNSYSPF--KHANK-----------EKSSGSHPYELEITALLENPRPE 93
PKPQ +F+ + DNS +PF K ++K E+ + HPY E+ L + P +
Sbjct: 145 PKPQQSFQESI-DNSTAPFVSKLSSKPHAIATSFPIHEEDASFHPYYNELVGL-KIPDWQ 202
Query: 94 FDFSNVD-----LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
+ S +D + LQ++ SF+WV++ ++ L + A+D E H+ RS+LG T
Sbjct: 203 LEMSEMDHLFDKISLQKA-SFLWVDSADSFQQMLLILQEAHALAIDLEHHNYRSYLGLTC 261
Query: 149 LIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLF 208
L+QIST D+LVDT+AL + +L F DP KV HG+D D++WLQRD +YVVN+F
Sbjct: 262 LMQISTHNHDFLVDTLALRSSLQLLNQVFCDPQKLKVLHGADMDILWLQRDLGLYVVNMF 321
Query: 209 DTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
DT +A VL P+ SLAYLL+ C + +K Q DWRQRPL EM +YA+ D YLL+I
Sbjct: 322 DTGRAARVLQLPRFSLAYLLKKCCDIEADKQYQLADWRQRPLTEEMTRYAREDTRYLLFI 381
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
+ + EL + + N+ N V E + SN +CLQVY+K S E +++ +
Sbjct: 382 YRKMKEELLLKSDSNAA------NLVREVHKHSNQLCLQVYSKPQVS---EDDCTALVTK 432
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
L GV++ S + Q + RRL WRD +AR DES +VL +Q ++ +A P+
Sbjct: 433 -LTASAGVTAFSELQQRVFRRLYFWRDAVARETDESSMYVLPNQLLLQIARHLPS 486
>gi|290982318|ref|XP_002673877.1| 3'-5' exonuclease and HRDC domain-containing protein [Naegleria
gruberi]
gi|284087464|gb|EFC41133.1| 3'-5' exonuclease and HRDC domain-containing protein [Naegleria
gruberi]
Length = 956
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 182/316 (57%), Gaps = 18/316 (5%)
Query: 72 KSSGSHPYELEITALL----ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
+ S HPY E+ +L + PE S L+ + W+ T L++LA L
Sbjct: 304 RQSSPHPYLPELLSLQFMKSQTTPPEKAISYAPLE---NSPCTWISTVEDLHKLATILEG 360
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
+ FA+D EQHS RSF GF L+QIST ED+L+DT+ L + IL F P + KV H
Sbjct: 361 QDAFAIDLEQHSYRSFQGFVCLMQISTRSEDFLIDTLELRQHMHILNSSFTHPKIVKVMH 420
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
GSD D++WLQRDF IY VNLFDT +AC L+ P SLAYLL+ YCG+ +K Q DWR
Sbjct: 421 GSDCDILWLQRDFAIYCVNLFDTGQACRTLALPGCSLAYLLKHYCGIDADKKYQLADWRV 480
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP+EM++YA+ D HYLLYI L ++ S F + E RS +C++
Sbjct: 481 RPLPSEMVKYAREDTHYLLYIYDRLRQDIFNTKPNTSTV--SGFERMEEVLVRSKELCMR 538
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
Y KE+ S + + L+ G + +S++++++R L WRD +AR DES+R+
Sbjct: 539 RYEKELFS-------ETSYLSLIKFSRGCT--ASISENVIRVLFKWRDTVARKDDESIRY 589
Query: 368 VLSDQAIIALANKAPA 383
VL D I+++A +AP
Sbjct: 590 VLPDHMILSIAQEAPT 605
>gi|260790959|ref|XP_002590508.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
gi|229275702|gb|EEN46519.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
Length = 832
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 193/374 (51%), Gaps = 54/374 (14%)
Query: 65 FKHANKEKSSG------SHPYELEI--------TALLENPRPEFDFSNVDLDLQRSDSFV 110
F H +E G +HPY+ E+ L + P+P L L
Sbjct: 223 FIHRQREVHQGQPADLTAHPYQYELEHFQPTPQQLLKKQPQPSKPIDATPLTL------- 275
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
V T +L ++ + L+ FAVD E HS RSF GFT L+Q+ST DY+VDT+AL ++
Sbjct: 276 -VTTLEELMDMNDKLTMCSEFAVDLEHHSYRSFQGFTCLMQVSTRDHDYIVDTLALRADL 334
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
+L F DP V KVFHG+D D+ WLQRDF +YVVN+FDT +A VL P+ SLAYLL+T
Sbjct: 335 HVLNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKT 394
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
YC V +K Q DWR RPLP+EM QYA+ D HYLL+I C+ +EL +GN +
Sbjct: 395 YCDVEPDKKYQLADWRIRPLPSEMTQYAREDTHYLLHIYDCMRSELLDRGNNEA------ 448
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
N + RS VCLQ Y K + + + LLN + +S VR +
Sbjct: 449 -NLLHNTLERSRQVCLQRYQKLLYT-------EDSYLNLLNKHK--KTFNSQQLHAVRLV 498
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPS 410
WRD +AR DES +VL + ++ LA P V+ C N P
Sbjct: 499 YRWRDTIARQEDESTGYVLPNHMLLVLAETLPKQIQGVFA----------CCN-----PV 543
Query: 411 PSPVVCSHLDDVER 424
P P+V H++DV R
Sbjct: 544 P-PLVRQHIEDVHR 556
>gi|427793373|gb|JAA62138.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6, partial [Rhipicephalus pulchellus]
Length = 911
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 189/354 (53%), Gaps = 36/354 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK------------------SSGSHPYELEITALLEN 89
+PQ NFK + DNS +PF ++K S HPYE EI +
Sbjct: 194 RPQLNFKEKV-DNSNTPFVPILRDKPHSLKPLAILPESNSDGQESYGHPYEWEIEHFEPS 252
Query: 90 PRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P S L ++ VET QL E+ ALSKE AVD E HS RSF GFT
Sbjct: 253 PTQLKAPSEERLPPPLEETPCTLVETVDQLKEMCEALSKETEIAVDLEHHSYRSFQGFTC 312
Query: 149 LIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLF 208
L+QIS+ +DY+VDT+AL E+ +L FADP + KVFHG+D DV+WLQRDF +Y+V LF
Sbjct: 313 LMQISSRTQDYIVDTLALRHELQMLNEVFADPKILKVFHGADMDVLWLQRDFGLYLVGLF 372
Query: 209 DTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
DT +A +VL SLA+LL+ YC + +K Q DWR RPLP EM+ YAQ+D HYLLYI
Sbjct: 373 DTGQAAKVLGLAHFSLAFLLKHYCQIEADKQFQLADWRIRPLPPEMVSYAQSDTHYLLYI 432
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
C+ +L + NEN N + RS V L+ Y K SY E + ++ +
Sbjct: 433 MDCMKRDLADRSNEND-------NLLRSVFDRSKQVALRCYEK--PSY-HEQSYMELYRK 482
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +S +R L +WRD AR DES +VL + I+ ++ P
Sbjct: 483 ------SRKTFNSRQLHALRHLYSWRDRTARNEDESTGYVLPNHMILEISEILP 530
>gi|156361913|ref|XP_001625528.1| predicted protein [Nematostella vectensis]
gi|156212365|gb|EDO33428.1| predicted protein [Nematostella vectensis]
Length = 552
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 171/308 (55%), Gaps = 18/308 (5%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDL-DLQRSDSFVWVETKSQLNELANALSKEFFFAVD 134
SHPYE E+ E P + + L D F VET QL L+ L + FAVD
Sbjct: 217 SHPYEFELQRF-EPPATQLKEAKEQLYDSLEDTPFTLVETVEQLESLSQKLMEAQEFAVD 275
Query: 135 TEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVM 194
E HS RSFLGF L+QIST D+LVDT+ L +++ +L F +P + KVFHG+D DV
Sbjct: 276 LEHHSYRSFLGFVCLMQISTRDHDFLVDTLELRNDLHLLNESFTNPNILKVFHGADMDVG 335
Query: 195 WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEM 254
WLQRDF IYVVN+FDT +A VL+ + SLA+LL+ +CGV +K Q DWR RPLP EM
Sbjct: 336 WLQRDFGIYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRPLPEEM 395
Query: 255 LQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIE 314
++YA+ D HYLLYI L EL + GNEN+ N +L RS VC + Y K +
Sbjct: 396 IRYAREDTHYLLYIHDRLRNELIRTGNENN-------NLLLSVYSRSTEVCQKHYEKPL- 447
Query: 315 SYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAI 374
S + L Q ++ V R L AWRD +AR DES +VL + +
Sbjct: 448 ------FTSESYMNLYTKQR--RPLNPVQLRAFRALYAWRDTIARREDESYGYVLPNHML 499
Query: 375 IALANKAP 382
+A P
Sbjct: 500 FTIAETLP 507
>gi|167527362|ref|XP_001748013.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773431|gb|EDQ87070.1| predicted protein [Monosiga brevicollis MX1]
Length = 837
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 177/308 (57%), Gaps = 20/308 (6%)
Query: 77 HPYELEITALLENPRPEFDFSNVDL--DLQRSDSFVWVETKSQLNELANALSKEFFFAVD 134
HPY E+ E P+ + L DL+++ + WV T+ L L L A+D
Sbjct: 234 HPYLTELNEF-EVPQHQLQPHEERLYGDLEQT-TCTWVGTREALVGLIERLKSVSELAID 291
Query: 135 TEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVM 194
E HS R++ GFT L+Q+ST EDYL+DT+AL D++ +L FADP + KV HG+D+D++
Sbjct: 292 LEAHSYRTYQGFTCLMQLSTRSEDYLIDTLALRDDLKLLNVIFADPAILKVLHGADSDIL 351
Query: 195 WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEM 254
WLQRD +Y+VN+FDT +A VL+ P+ SLA+LL+ YC +K Q DWR RPL EM
Sbjct: 352 WLQRDHSLYIVNMFDTGQATRVLNFPRHSLAWLLQHYCNFKADKKYQLADWRVRPLSEEM 411
Query: 255 LQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIE 314
L YA+ D H+LLYI L +EL QGNE + N + +RS +CLQ Y K
Sbjct: 412 LHYARCDTHFLLYIYDRLHSELLAQGNEQA-------NLLRAVYQRSKELCLQRYEKPFY 464
Query: 315 SYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAI 374
S +A A R+ S+ +L L AWRD +AR DES R+VL D +
Sbjct: 465 S---QATAEDALNRM------SRSLVPSAVELFMALHAWRDQVARDEDESPRYVLPDHML 515
Query: 375 IALANKAP 382
+ LA++AP
Sbjct: 516 LELASRAP 523
>gi|226487924|emb|CAX75627.1| Exosome component 10 [Schistosoma japonicum]
Length = 860
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 195/366 (53%), Gaps = 50/366 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-----------SSGS-------HPYELEITALLEN 89
+PQ +F DNSYSPF+ K K S+ + HPY++E+ A N
Sbjct: 179 RPQISFS-TPPDNSYSPFRPKIKSKPNCIQPLPKSLSNNADESIEYLHPYQVELEAFANN 237
Query: 90 PRPEF------DFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSF 143
P + DF+ LD S+ +++ L + +LS + AVD E HS RSF
Sbjct: 238 -VPNWNAMLSDDFTVKPLD----SSYQYIDKLDTLEQTVKSLSVCRYIAVDLEHHSYRSF 292
Query: 144 LGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIY 203
LG T LIQIST DY++D +ALHD +SIL F DP + KVFHGSD+D+MWLQRDF +Y
Sbjct: 293 LGITCLIQISTLDTDYIIDALALHDHLSILNEVFTDPKIVKVFHGSDSDLMWLQRDFGVY 352
Query: 204 VVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAH 263
VVNLFDT A +L + SL+YLL+ Y + NK Q DWR RPLP E+++YA+TD H
Sbjct: 353 VVNLFDTGVAARLLQHGRFSLSYLLQRYVNINPNKKYQLADWRIRPLPNELIEYARTDTH 412
Query: 264 YLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS 323
YLL+IA + EL+ + N + R+ +CL+ YTK + + G
Sbjct: 413 YLLHIASRMCRELQDR------------NLLSVTFERARQLCLKCYTKPVFNRLG----- 455
Query: 324 SIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+ L Q G SS S + L A RD +AR DESL +VL + + +A P
Sbjct: 456 ---YLDLYKQTGCSSFSHRQLYALENLHALRDSIARREDESLHYVLPNHMLKVIAEVLPR 512
Query: 384 NRTDVY 389
+ V+
Sbjct: 513 ESSGVF 518
>gi|405972152|gb|EKC36938.1| Exosome component 10 [Crassostrea gigas]
Length = 826
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 178/316 (56%), Gaps = 22/316 (6%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPY+ E++ L R D + L +V T +L+ + + L KE AVD E
Sbjct: 221 HPYKYELSVLKPTDRQLQDTEPLKPRLVEDTPLTFVSTVIELSSVIDKLRKEHIVAVDLE 280
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
HS RSF G T L+QIST +D+L+DT+AL +++S L F P V KVFHG+D+D+ WL
Sbjct: 281 HHSYRSFQGITCLMQISTATDDFLIDTLALRNDLSPLNEIFTHPAVVKVFHGADSDIDWL 340
Query: 197 QRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQ 256
QRD +YVVN+FDT +A VL+ + SLA+L+E YC V T+K Q DWR RPLPAE+++
Sbjct: 341 QRDLGLYVVNMFDTGQAARVLNHSRFSLAHLMEHYCDVITDKQYQLADWRIRPLPAELMK 400
Query: 257 YAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI--- 313
YA+ D HYL YI + + EL +GN D+ N +L +RS +C +VY K++
Sbjct: 401 YAREDTHYLTYIYQRMKQELLARGN-------DQKNLLLSVLQRSTEICAKVYKKQVFKE 453
Query: 314 ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQA 373
+SY S F Q +++L WRD +AR DES +VL +
Sbjct: 454 DSYLELYRKSKKVFNSRQLQA------------LQKLYQWRDKLARQEDESTGYVLPNHM 501
Query: 374 IIALANKAPANRTDVY 389
I+ +A+ P + ++
Sbjct: 502 ILQIADILPREQQGIF 517
>gi|334183304|ref|NP_001185222.1| RRP6-like protein 1 [Arabidopsis thaliana]
gi|332194982|gb|AEE33103.1| RRP6-like protein 1 [Arabidopsis thaliana]
Length = 639
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 188/350 (53%), Gaps = 40/350 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFSNVDLDL 103
KPQ +K +L DN+ +PF+H EKS HP E E++ + DF + +L
Sbjct: 52 KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLE-ELSVM--------DFVDRNLSE 101
Query: 104 QR--------SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
R F VE L +LA AL FAVD E + R+F G T L+QIST
Sbjct: 102 MRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTR 161
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
EDY+VD L D I L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 162 TEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQAS 221
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
VL + SL +LL+ YCGVA NK Q+ DWR RPLP M +YA+ D HYLLYI +
Sbjct: 222 RVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRM 281
Query: 275 ELKQQG--NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
EL +E S P ++E +RS VC+Q+Y KE+ + + +
Sbjct: 282 ELHTMAKEDEQSDSP------LVEVYKRSYDVCMQLYEKELWTRDS-------YLHVYGV 328
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
Q G ++++V +V LC WRD +AR DES +VL ++ + +A + P
Sbjct: 329 QTG--NLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMP 376
>gi|145336746|ref|NP_175846.3| RRP6-like protein 1 [Arabidopsis thaliana]
gi|110741918|dbj|BAE98900.1| hypothetical protein [Arabidopsis thaliana]
gi|160892399|gb|ABX52079.1| RRP6-like protein 1 [Arabidopsis thaliana]
gi|332194981|gb|AEE33102.1| RRP6-like protein 1 [Arabidopsis thaliana]
Length = 637
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 188/350 (53%), Gaps = 40/350 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFSNVDLDL 103
KPQ +K +L DN+ +PF+H EKS HP E E++ + DF + +L
Sbjct: 52 KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLE-ELSVM--------DFVDRNLSE 101
Query: 104 QR--------SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
R F VE L +LA AL FAVD E + R+F G T L+QIST
Sbjct: 102 MRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTR 161
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
EDY+VD L D I L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 162 TEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQAS 221
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
VL + SL +LL+ YCGVA NK Q+ DWR RPLP M +YA+ D HYLLYI +
Sbjct: 222 RVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRM 281
Query: 275 ELKQQG--NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
EL +E S P ++E +RS VC+Q+Y KE+ + + +
Sbjct: 282 ELHTMAKEDEQSDSP------LVEVYKRSYDVCMQLYEKELWTRDS-------YLHVYGV 328
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
Q G ++++V +V LC WRD +AR DES +VL ++ + +A + P
Sbjct: 329 QTG--NLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMP 376
>gi|384501951|gb|EIE92442.1| hypothetical protein RO3G_16964 [Rhizopus delemar RA 99-880]
Length = 599
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 194/367 (52%), Gaps = 44/367 (11%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HA-----------NKEKSSGSHPYELEITAL--- 86
+PQ FK + +++ +PF+ HA N + S HPY EI +
Sbjct: 151 RPQMKFKDPVDNSNSTPFERKIKYKPHAQVPLDDTPVIENGIQKSLPHPYTYEIQHVEYP 210
Query: 87 -----LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLR 141
+ P+ F N S++WV+T++ L E+ AL AVD E H+ R
Sbjct: 211 ENMFQIREPKQYEPFDNT--------SYIWVDTEAGLEEMMKALEDVEEIAVDLEHHNYR 262
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
S+ GFT L+Q+ST +D+++DT+ L D++ L +FADP + KV HG+D+DV+WLQRDF
Sbjct: 263 SYQGFTCLMQLSTRNQDFIIDTLELRDKLWRLNEYFADPTIVKVLHGADSDVIWLQRDFG 322
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+Y+VNLFDT +VL P LAYLL+ YC +K Q DWR RPLP EML YA+ D
Sbjct: 323 LYLVNLFDTYFPTKVLEFPHHGLAYLLKRYCNYDADKKYQLADWRIRPLPQEMLMYARAD 382
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
H+LLYI CL EL + + N + +RSN V LQ Y K+I Y +
Sbjct: 383 THFLLYIYDCLRNELLSASSHGA-------NLMQNCLQRSNEVALQKYDKDI--YDAQGG 433
Query: 322 ASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKA 381
++ + + S+++ + + + AWRD AR DES+R+VL + + AL +
Sbjct: 434 LGPFGWKNMLSKWKY-SMNAQQLAVFKAIHAWRDHTARDEDESVRYVLPNHMLFALVERM 492
Query: 382 PANRTDV 388
P + V
Sbjct: 493 PTESSGV 499
>gi|256073603|ref|XP_002573119.1| polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]
gi|353232486|emb|CCD79841.1| polymyositis/scleroderma autoantigen-related [Schistosoma mansoni]
Length = 830
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 196/361 (54%), Gaps = 40/361 (11%)
Query: 48 KPQHNFKRVLADNSYSPFK------------------HANKEKSSGSHPYELEITALLEN 89
+PQ +F DNSYS F+ + N E + HPY++E+ N
Sbjct: 135 RPQTSFA-TPPDNSYSSFRPKIKSKPNCIQPLPELLSNDNGESTDYPHPYKVELETFGNN 193
Query: 90 PRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
+ + D ++ DS + +V+T L ++ +LS + AVD E HS RSFLG T
Sbjct: 194 LPSLNEMMSEDFPVKPLDSSYQYVDTLDTLEQIMKSLSMCKYIAVDLEHHSYRSFLGITC 253
Query: 149 LIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLF 208
LIQ+ST DY++D +AL D +SIL F DP + KVFHGSD+D+MWLQRDF +YVVNLF
Sbjct: 254 LIQMSTLGSDYIIDALALRDHLSILNEVFTDPKIVKVFHGSDSDLMWLQRDFGVYVVNLF 313
Query: 209 DTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
DT A +L + SL+YLL+ + G+ NK Q DWR RPLP E+++YA++D HYLL+I
Sbjct: 314 DTGIAARLLQYGRFSLSYLLQRFVGIYANKKYQLADWRIRPLPNELIEYARSDTHYLLHI 373
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
A + EL+ + D + +E +R+ +CL+ YTK + + G +
Sbjct: 374 ASRMCRELQDR---------DLLSVAIERARQ---LCLRCYTKPVFNRLG--------YL 413
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L Q G SS S + L A RD +AR DESL +VL + + +A P + +
Sbjct: 414 DLYRQTGSSSFSHRQLYALENLYALRDSIARREDESLHYVLPNHMLKVIAEVLPRESSGI 473
Query: 389 Y 389
+
Sbjct: 474 F 474
>gi|4585987|gb|AAD25623.1|AC005287_25 Similar to nucleolar protein [Arabidopsis thaliana]
Length = 642
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 186/350 (53%), Gaps = 38/350 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFSNVDLDL 103
KPQ +K +L DN+ +PF+H EKS HP E E++ + DF + +L
Sbjct: 52 KPQEEYK-ILVDNANNPFEHVLLEKSEDGLRFIHPLE-ELSVM--------DFVDRNLSE 101
Query: 104 QR--------SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
R F VE L +LA AL FAVD E + R+F G T L+QIST
Sbjct: 102 MRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQGLTCLMQISTR 161
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
EDY+VD L D I L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 162 TEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNLFDTGQAS 221
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
VL + SL +LL+ YCGVA NK Q+ DWR RPLP M +YA+ D HYLLYI +
Sbjct: 222 RVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRM 281
Query: 275 ELKQQG--NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
EL +E S P ++E +RS VC+Q+Y KE+ + + +
Sbjct: 282 ELHTMAKEDEQSDSP------LVEVYKRSYDVCMQLYEKELWTRDS-------YLHVYGV 328
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
Q G + ++ ++ LC WRD +AR DES +VL ++ + +A + P
Sbjct: 329 QTGNLNAVQLSIVALQGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMP 378
>gi|414864885|tpg|DAA43442.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 577
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 202/395 (51%), Gaps = 46/395 (11%)
Query: 45 SEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFD-FSN 98
S P+PQ +K + DN Y PF+H E+S HP E L + ++ P+ +
Sbjct: 86 SIPRPQDVYK-IRVDN-YKPFEHVWLERSEDGTRRVHPLENLPVEQFVDRNVPDREPVKP 143
Query: 99 VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
DL+ F V+ L ELA L FAVD E + RSF G T L+QIST ED
Sbjct: 144 ADLE---DTPFTLVQDHKGLTELAKKLKSVTEFAVDLEHNQYRSFQGLTCLMQISTRTED 200
Query: 159 YLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
++VDT+ L I + LQ F DP KV HG+D D+MWLQRDFHIYV NLFDT +A VL
Sbjct: 201 FIVDTLKLRIYIGLYLQEPFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVL 260
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
+ SL +LL +CGV K Q DWR RPLP EM++YA+ D HYLLYI + L+
Sbjct: 261 QMERNSLEHLLLHFCGVTAKKEYQNADWRSRPLPDEMIKYAREDTHYLLYIYDLMRQRLQ 320
Query: 278 QQGN-ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV 336
++ EN + +LE +RSN +CLQ Y KE+ + + + Q
Sbjct: 321 RESTFEN--------DLLLEVHKRSNEICLQFYEKEL-------LTDTSYLHIYGLQE-- 363
Query: 337 SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
+ + +V L WRD +AR DES ++L ++A+I +A + P
Sbjct: 364 HELDARQLAVVAALHEWRDRIARQEDESTGYILPNKALIEIAKQMP-------------- 409
Query: 397 SDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVE 431
D +L + S P V S+L+ + V N +E
Sbjct: 410 --TDVGHLKRIVKSKYPYVESNLELIAYTVWNALE 442
>gi|356514082|ref|XP_003525736.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 506
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 191/358 (53%), Gaps = 22/358 (6%)
Query: 37 PQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPR 91
P+ ++ + KPQH + + DN+ PF H + S G HP E L + + ++
Sbjct: 6 PKVPFHVSTIKKPQHEYN-IFVDNTNLPFNHVWLKWSHGEKRFIHPLESLSVMSFVDTDV 64
Query: 92 PEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQ 151
D V S F VET L ELA L FAVD E + R+F G T L+Q
Sbjct: 65 G--DVVPVKAPPIESTPFKLVETVQDLKELAAKLHSADEFAVDLEHNQYRTFQGLTCLMQ 122
Query: 152 ISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT 210
IST ED++VDT+ LH I L+ F DP KV HG+DNDV+WLQRDF IY+ NLFDT
Sbjct: 123 ISTRTEDFIVDTLKLHSSIGPYLREVFKDPSKRKVMHGADNDVVWLQRDFGIYICNLFDT 182
Query: 211 AKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
+A +VL +KSL YLL +C + NK Q DWR RPLP EML+YA+ D HYLLYI
Sbjct: 183 HQASKVLKLERKSLEYLLCHFCDITANKEYQSADWRLRPLPYEMLRYAREDTHYLLYIYD 242
Query: 271 CLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLL 330
+ EL E P+ ++E + S VC+++Y KE+ F R+
Sbjct: 243 FMRIELFSMLKE----PESVDAPLVEVYKCSYKVCMRLYEKEL-------LTEKSFLRIY 291
Query: 331 NGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
QG + ++ +V L WRD +ARV D+S +VL +++I+ +A + P ++
Sbjct: 292 GLQG--AGFNAQQLAVVSGLFKWRDFVARVKDDSTGYVLPNKSILEIAKQMPVTANNL 347
>gi|336369802|gb|EGN98143.1| hypothetical protein SERLA73DRAFT_91376 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382569|gb|EGO23719.1| hypothetical protein SERLADRAFT_450051 [Serpula lacrymans var.
lacrymans S7.9]
Length = 879
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 204/392 (52%), Gaps = 43/392 (10%)
Query: 30 RRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSP----------------FKHANKEKS 73
R +L+ Q++ +L PKPQ +FK + + SP + + + E+
Sbjct: 147 RGRLDPTWQHASHL---PKPQLSFKTKVDNTVDSPWHPTLRHKYNAQVPLGYIYRDSEED 203
Query: 74 SGS-----HPYELEITALLENPRPEFDF---SNVDLDLQRSDSFVWVETKSQLNELANAL 125
+ S HPY+ EI P P F S + WV T + + + L
Sbjct: 204 ADSTKLNLHPYQYEIK---HTPYPPSMFQIRSPQPPKILEETPLSWVSTSADFSAMLEKL 260
Query: 126 SKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKV 185
+ AVD E HS R+F GF L+QIST ED++VDT+AL +E+S L F DP + KV
Sbjct: 261 RQATELAVDLEHHSYRTFSGFLCLMQISTRDEDFIVDTLALREELSELNEVFTDPRIVKV 320
Query: 186 FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDW 245
FHG+++D++WLQ+DF++Y+VNLFDT A + + P+ LA LLE YC +K Q DW
Sbjct: 321 FHGAESDIVWLQQDFNLYIVNLFDTFHASKAIGFPKHGLASLLEMYCDFTPDKQYQLADW 380
Query: 246 RQRPLPAEMLQYAQTDAHYLLYIAKCL------VAELKQQG--NENSYCP--DDKFNFVL 295
R RPLP EML YA++D HYLL+I L +A+ + Q NE+S P D +
Sbjct: 381 RMRPLPDEMLAYARSDTHYLLFIYDNLRNALIDLAQSRAQSSQNESSSGPAADPAHALIR 440
Query: 296 EASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCA 352
+ RS L+VY +E+ E G + + G S+ SV Q++ R + A
Sbjct: 441 QVLFRSEETALRVYERELYDAEDGSGPGGWDGLARKWNKGTLMASARGSVRQEVYRSVHA 500
Query: 353 WRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
WRD ++R DES R+VL + + LA + P++
Sbjct: 501 WRDRVSREEDESTRYVLPNHYLFQLAEQPPSD 532
>gi|293334443|ref|NP_001170525.1| uncharacterized protein LOC100384536 [Zea mays]
gi|238005848|gb|ACR33959.1| unknown [Zea mays]
gi|414864884|tpg|DAA43441.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 666
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 202/395 (51%), Gaps = 46/395 (11%)
Query: 45 SEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFD-FSN 98
S P+PQ +K + DN Y PF+H E+S HP E L + ++ P+ +
Sbjct: 86 SIPRPQDVYK-IRVDN-YKPFEHVWLERSEDGTRRVHPLENLPVEQFVDRNVPDREPVKP 143
Query: 99 VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
DL+ F V+ L ELA L FAVD E + RSF G T L+QIST ED
Sbjct: 144 ADLE---DTPFTLVQDHKGLTELAKKLKSVTEFAVDLEHNQYRSFQGLTCLMQISTRTED 200
Query: 159 YLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
++VDT+ L I + LQ F DP KV HG+D D+MWLQRDFHIYV NLFDT +A VL
Sbjct: 201 FIVDTLKLRIYIGLYLQEPFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVL 260
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
+ SL +LL +CGV K Q DWR RPLP EM++YA+ D HYLLYI + L+
Sbjct: 261 QMERNSLEHLLLHFCGVTAKKEYQNADWRSRPLPDEMIKYAREDTHYLLYIYDLMRQRLQ 320
Query: 278 QQGN-ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV 336
++ EN + +LE +RSN +CLQ Y KE+ + + + Q
Sbjct: 321 RESTFEN--------DLLLEVHKRSNEICLQFYEKEL-------LTDTSYLHIYGLQE-- 363
Query: 337 SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
+ + +V L WRD +AR DES ++L ++A+I +A + P
Sbjct: 364 HELDARQLAVVAALHEWRDRIARQEDESTGYILPNKALIEIAKQMP-------------- 409
Query: 397 SDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVE 431
D +L + S P V S+L+ + V N +E
Sbjct: 410 --TDVGHLKRIVKSKYPYVESNLELIAYTVWNALE 442
>gi|242042163|ref|XP_002468476.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
gi|241922330|gb|EER95474.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
Length = 702
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 189/350 (54%), Gaps = 29/350 (8%)
Query: 45 SEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFDFSNV 99
S P+PQ +K ++ DN Y+PF+H E+S HP E L + + PE + V
Sbjct: 86 SIPRPQDVYK-IIVDN-YNPFEHVWLERSEDGTRRVHPLEKLPVEQFVGRNIPERE--PV 141
Query: 100 DLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
F VE L ELA L FAVD E + RSF G T L+QIST ED+
Sbjct: 142 KPAALEDTPFTLVEDHKGLVELAKKLKGVTEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 201
Query: 160 LVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS 218
+VDT+ L I + LQ F DP KV HG+D D+MWLQRDFHIYV NLFDT +A VL
Sbjct: 202 IVDTLKLRIYIGLYLQEPFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVLQ 261
Query: 219 KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
+ SL +LL +CGV K Q DWR RPLP EM++YA+ D HYLLYI + L++
Sbjct: 262 MERNSLEHLLLHFCGVTAKKEYQNADWRSRPLPDEMIKYAREDTHYLLYIYDLMRQRLQK 321
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
E+++ D +LE +RSN +CLQ Y KE+ + + + Q
Sbjct: 322 ---ESTFEND----LLLEVHKRSNEICLQFYEKEL-------LTDTSYLHIYGLQ--EHE 365
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ + +V L WRD +AR DES ++L ++A+I +A + P TDV
Sbjct: 366 LDAKQLAVVAALHEWRDSIARQEDESTGYILPNKALIEIAKQMP---TDV 412
>gi|115450833|ref|NP_001049017.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|108706273|gb|ABF94068.1| 3'-5' exonuclease family protein, expressed [Oryza sativa Japonica
Group]
gi|113547488|dbj|BAF10931.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|215695202|dbj|BAG90393.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624215|gb|EEE58347.1| hypothetical protein OsJ_09469 [Oryza sativa Japonica Group]
Length = 600
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 201/395 (50%), Gaps = 47/395 (11%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSS-GSHPYELEITALLENPRPEFDFSNVD----- 100
P+PQ + + +N PF H E++ GS P I L + P +F NV
Sbjct: 81 PRPQDVYA-IRVNNYNVPFDHVWLERTEDGSRP----IHPLEKLPMEQFIDRNVPESEPV 135
Query: 101 --LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
DL+ + F VE K+ L +LA L FAVD E + RSF G T L+QIST ED
Sbjct: 136 KPADLEDT-PFTLVEDKNGLADLAKKLKSVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 194
Query: 159 YLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
++VDT+ L I + L+ F DP KV HG+D D+MWLQRDFHIYV NLFDT +A VL
Sbjct: 195 FVVDTLKLRIYIGLYLKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVL 254
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
+ SL +LL +CGV NK Q DWR RPL EM++YA+ D HYLLY+ + L+
Sbjct: 255 QMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLRLQ 314
Query: 278 QQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS 337
++ ++ + +LE +RSN +CLQ+Y KE+ + + + Q
Sbjct: 315 KESTSDN-------DLLLEVQKRSNEICLQLYEKEL-------LTDTSYLHIYGLQE--H 358
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADS 397
+ + +V L WRD +AR DES +VL ++A+I +A K P
Sbjct: 359 DLDAKQLAVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMP--------------- 403
Query: 398 DVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVEN 432
D L + S P V +LD V + N E+
Sbjct: 404 -TDTAELKRMVKSKYPFVDENLDQVVGIIWNATES 437
>gi|218192123|gb|EEC74550.1| hypothetical protein OsI_10088 [Oryza sativa Indica Group]
Length = 599
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 201/395 (50%), Gaps = 47/395 (11%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSS-GSHPYELEITALLENPRPEFDFSNVD----- 100
P+PQ + + +N PF H E++ GS P I L + P +F NV
Sbjct: 80 PRPQDVYA-IRVNNYNVPFDHVWLERTEDGSRP----IHPLEKLPMEQFIDRNVPESEPV 134
Query: 101 --LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
DL+ + F VE K+ L +LA L FAVD E + RSF G T L+QIST ED
Sbjct: 135 KPADLEDT-PFTLVEDKNGLADLAKKLKSVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 193
Query: 159 YLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
++VDT+ L I + L+ F DP KV HG+D D+MWLQRDFHIYV NLFDT +A VL
Sbjct: 194 FVVDTLKLRIYIGLYLKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQASRVL 253
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
+ SL +LL +CGV NK Q DWR RPL EM++YA+ D HYLLY+ + L+
Sbjct: 254 QMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLRLQ 313
Query: 278 QQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS 337
++ ++ + +LE +RSN +CLQ+Y KE+ + + + Q
Sbjct: 314 KESTSDN-------DLLLEVQKRSNEICLQLYEKEL-------LTDTSYLHIYGLQE--H 357
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADS 397
+ + +V L WRD +AR DES +VL ++A+I +A K P
Sbjct: 358 DLDAKQLAVVYALHQWRDYIAREVDESTGYVLPNKALIEIAKKMP--------------- 402
Query: 398 DVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVEN 432
D L + S P V +LD V + N E+
Sbjct: 403 -TDTAELKRMVKSKYPFVDENLDQVVGIIWNATES 436
>gi|281206812|gb|EFA80996.1| 3'-5' exonuclease [Polysphondylium pallidum PN500]
Length = 1011
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 177/325 (54%), Gaps = 28/325 (8%)
Query: 70 KEKSSGSHPYELEITAL------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELAN 123
+EK HPYE E+ L +++ R + +D ++ WV+ QL L
Sbjct: 235 QEKIVFPHPYEYELNHLQFLAKQIQSCRENL-YKGLD-----ETAYTWVDRVDQLAALTE 288
Query: 124 ALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVC 183
L++ FAVD E H+ RSF GF L+Q+ST ED++VDT+ L + +L F +P +
Sbjct: 289 KLNQVEEFAVDLEAHNYRSFQGFVCLMQVSTRTEDFIVDTLVLRSHMKMLNVPFTNPKIV 348
Query: 184 KVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE 243
KV HGS++DV WLQRDF IY+VN+FDT +A +L P SLA+LL YCGV NK Q
Sbjct: 349 KVLHGSESDVKWLQRDFGIYIVNMFDTGQASRILEYPSASLAFLLRFYCGVDANKKFQLA 408
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNT 303
DWR RP+P EM++YA+ D HYLLYI L EL +G + N+++E RRS
Sbjct: 409 DWRIRPVPEEMIKYAREDTHYLLYIYDRLRNELVLKGKSTN-------NYLMEVLRRSKE 461
Query: 304 VCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDE 363
+CL Y K+I A L G + + + + R L WR+ +AR DE
Sbjct: 462 ICLIKYEKDILDENSHA-------EYLKKNGITYNPAQLK--IFRLLYNWREKVARDDDE 512
Query: 364 SLRFVLSDQAIIALANKAPANRTDV 388
S+R++L + + + K P TD+
Sbjct: 513 SVRYILPNSMMQLIVEKQPTTITDL 537
>gi|320167779|gb|EFW44678.1| exosome component 10 protein [Capsaspora owczarzaki ATCC 30864]
Length = 945
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 188/366 (51%), Gaps = 40/366 (10%)
Query: 60 NSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDS---FVWVETKS 116
N PF H + S HPYE E+ A P E + V L R+D F W++++
Sbjct: 247 NPKVPFAH---DLGSFPHPYERELLAF--EP-AETQLTAVAEQLYRTDEETPFTWIDSEE 300
Query: 117 QLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPF 176
+L + A LS FA+D E HS RS GF L+Q+ST ED ++DT+A+ + L+
Sbjct: 301 ELIDFARRLSSVSEFAIDLEHHSYRSLQGFVCLMQVSTRTEDVVIDTLAVRSSMHHLREV 360
Query: 177 FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVAT 236
FA+P + KVFHG+D DV+WLQ DF IY +N+FDT +A VL SLA+LL +C V
Sbjct: 361 FANPNILKVFHGADMDVVWLQHDFGIYTINMFDTGQAARVLELGSYSLAHLLRYFCNVTA 420
Query: 237 NKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLE 296
+K Q DWR RP+PAEMLQYA+ D HYLLYI L EL + NE+S N +
Sbjct: 421 DKKYQLADWRIRPIPAEMLQYAREDTHYLLYIYDRLRNELVSRSNESS-------NLLRV 473
Query: 297 ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDL 356
A +S VCL+ Y K + + E + +F + + + + L AWRD
Sbjct: 474 AYAKSRDVCLKTYEKPL--FDPENSHMQLFLK------HSRTFGPQQMQVFKALFAWRDR 525
Query: 357 MARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVC 416
M R DES +VL + + +A P + L+ +P P P+V
Sbjct: 526 MGREEDESTGYVLPNHMLFHIAEALPTESAGI---------------LACCIPVP-PLVR 569
Query: 417 SHLDDV 422
H+ D+
Sbjct: 570 LHVTDL 575
>gi|222612881|gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japonica Group]
Length = 877
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 194/350 (55%), Gaps = 29/350 (8%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSS-GS---HPYE-LEITALLENPRPEFD- 95
++ + P+PQ + R+L DNS PF+H+ EKS GS HP E + + L++ PE +
Sbjct: 167 HIPTIPRPQ-DVHRILVDNSSKPFEHSWLEKSDDGSRVVHPLEKIPMEQLVDRDFPESEP 225
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
LD F VE L LA L FAVD E + RSF G T L+QIST
Sbjct: 226 IKPPALD---DTPFTHVEDLKSLEVLATKLKSATEFAVDLEHNHYRSFQGLTCLMQISTR 282
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED++VDT+ L + L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 283 TEDFIVDTLKLRKYLGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQAS 342
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+L + SL +LL +CGV NK Q DWR RPLP EM++YA+ D HYLLYI +
Sbjct: 343 RILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDLMRL 402
Query: 275 EL-KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
L K+ +EN + +LE +RS +CLQ+Y KE+ ++ +S ++ L
Sbjct: 403 RLVKESSDEN--------DLLLEVYKRSKEICLQLYEKELLTH-----SSYLYIHGLKEN 449
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+ SV ++ + WRD +AR DES ++L ++ ++ +A + PA
Sbjct: 450 EFDARQLSVLANIYK----WRDSVARGEDESTGYILPNKTLLEIAKQMPA 495
>gi|384247138|gb|EIE20625.1| hypothetical protein COCSUDRAFT_18228, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 187/362 (51%), Gaps = 36/362 (9%)
Query: 47 PKPQHNFKRVLADNSYSPFK----HANKEKSSGSHPYELEITAL------LENPRPEFDF 96
P+PQ F + DNS +PF+ H + + + HP E + L LE P P+
Sbjct: 1 PRPQDAFNPPV-DNSNTPFRPKLGHWVR-REAAVHPLEAALNDLKYEDKQLEAPEPQLP- 57
Query: 97 SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK 156
+D +V+T L LA ALS AVD E HS RSF GF L+Q+ST
Sbjct: 58 QGLD-----ETPLTYVDTLDGLKSLAQALSAVREVAVDLEAHSFRSFQGFCCLMQVSTRT 112
Query: 157 EDYLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACE 215
DYLVD IAL I L P FAD + KV HGSD+D++WLQRDF IYV +LFDT +A
Sbjct: 113 ADYLVDVIALRSHIGPHLAPMFADTKIVKVLHGSDSDIVWLQRDFGIYVASLFDTGQAAR 172
Query: 216 VLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA- 274
VL+ P LAYLL +C V +K Q DWR RPL AE L YA+ D HYLLYI CL
Sbjct: 173 VLAYPSAGLAYLLSHFCSVKADKRWQLADWRVRPLSAEALHYARLDTHYLLYIYDCLKVL 232
Query: 275 --ELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
L+++ E P VLE RS +CLQ Y KE+ S E + + R
Sbjct: 233 PDHLQEEVPERG--PATCMGVVLE---RSRLLCLQRYEKELFS---ETSYLDAYRRCQE- 283
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
++ + L AWRD AR DES FVLS ++ LA +AP+N D+ +
Sbjct: 284 -----PLTREQLAVFAGLYAWRDRTARERDESTGFVLSRALLVKLAKRAPSNARDLRAVL 338
Query: 393 AQ 394
+
Sbjct: 339 GK 340
>gi|110289135|gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 902
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 194/350 (55%), Gaps = 29/350 (8%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSS-GS---HPYE-LEITALLENPRPEFD- 95
++ + P+PQ + R+L DNS PF+H+ EKS GS HP E + + L++ PE +
Sbjct: 192 HIPTIPRPQ-DVHRILVDNSSKPFEHSWLEKSDDGSRVVHPLEKIPMEQLVDRDFPESEP 250
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
LD F VE L LA L FAVD E + RSF G T L+QIST
Sbjct: 251 IKPPALD---DTPFTHVEDLKSLEVLATKLKSATEFAVDLEHNHYRSFQGLTCLMQISTR 307
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED++VDT+ L + L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 308 TEDFIVDTLKLRKYLGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQAS 367
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+L + SL +LL +CGV NK Q DWR RPLP EM++YA+ D HYLLYI +
Sbjct: 368 RILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDLMRL 427
Query: 275 EL-KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
L K+ +EN + +LE +RS +CLQ+Y KE+ ++ +S ++ L
Sbjct: 428 RLVKESSDEN--------DLLLEVYKRSKEICLQLYEKELLTH-----SSYLYIHGLKEN 474
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+ SV ++ + WRD +AR DES ++L ++ ++ +A + PA
Sbjct: 475 EFDARQLSVLANIYK----WRDSVARGEDESTGYILPNKTLLEIAKQMPA 520
>gi|348690893|gb|EGZ30707.1| hypothetical protein PHYSODRAFT_553621 [Phytophthora sojae]
Length = 1507
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 205/370 (55%), Gaps = 40/370 (10%)
Query: 45 SEPKPQHNFKRVLADNSYSPFKHANKEK----SSGS--------------HPYELEITAL 86
++ KPQ F + DNS +PF +EK + G+ HPY EI AL
Sbjct: 165 AQDKPQDRFDEKI-DNSDAPFVSKLREKVHALNDGAAVVADDEDDEMAPRHPYFPEIKAL 223
Query: 87 LENPRPEFDFSNVD-----LDLQRSDSFVWVETKSQLNELANALS--KEFFFAVDTEQHS 139
P + D ++L+++ S++WV+++ +L ++ +L+ + AVD E HS
Sbjct: 224 KYAP---WQLEASDEPYEMVELEKA-SYLWVDSEEKLVQMMKSLTAVEARVIAVDLEHHS 279
Query: 140 LRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRD 199
RS++G T L+QIST +ED+LVDT+AL ++ L F DP KV HGSD D++WLQRD
Sbjct: 280 YRSYMGLTCLMQISTAREDFLVDTLALRGKLQTLNQVFCDPAKVKVLHGSDMDILWLQRD 339
Query: 200 FHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQ 259
+Y+VNLFDT +A +L P+ SLAY+L+ +C + +K Q DWR RPL M++YA+
Sbjct: 340 LGLYIVNLFDTGRAARLLQYPRFSLAYMLKRHCNIDADKQYQLADWRTRPLDKNMVKYAR 399
Query: 260 TDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGE 319
D YLL+I L EL Q G ++ + +F+ + + S+ +CLQVY K P E
Sbjct: 400 EDTRYLLFIYDRLKKELLQAGAKS------RESFLFQTLQNSSKLCLQVYEK---PQPTE 450
Query: 320 AAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
A ++ + L G +S + + ++ L WRD +AR DES+ +V+++ ++ L
Sbjct: 451 EDALALGEK-LKGTVNTQELSELQKRVIVALYLWRDRVARQEDESVAYVMANHVLMKLTK 509
Query: 380 KAPANRTDVY 389
P +++
Sbjct: 510 HLPVRSDELF 519
>gi|449522510|ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 935
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 196/362 (54%), Gaps = 24/362 (6%)
Query: 28 RRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEI 83
+ R+ L P+ ++ + +PQ F +L +NS PF+H ++S HP E ++
Sbjct: 167 KDRKTLGVKPKVPFHIPTIRRPQDEFN-ILVNNSNQPFEHVWLQRSEDGIRFVHPLE-KL 224
Query: 84 TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSF 143
+ L + DF + F ++E + L ELA L FAVD E + RSF
Sbjct: 225 SVLDFVDKISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSF 284
Query: 144 LGFTALIQISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
G T L+QIST EDY+VDT+ L + L+ F DP KV HG+D DV+WLQRDF I
Sbjct: 285 QGLTCLMQISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGI 344
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
Y+ NLFDT +A VL + SL YLL +CGVA NK Q DWR RPLP EM++YA+ D
Sbjct: 345 YICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDT 404
Query: 263 HYLLYIAKCLVAELKQ--QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
HYLLYI + +L + +E S P ++E +RS+ VC+ +Y KE+ +
Sbjct: 405 HYLLYIYDLMRMKLASMPRESEESDLP------LVEVYKRSHDVCMHLYEKELLT----- 453
Query: 321 AASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
+S ++ L G G + +V L WRD++AR DES ++L ++ ++ +A +
Sbjct: 454 ESSYLYVYGLQGSGFDAQQLAVAAGLFE----WRDVVARAEDESTGYILPNKTLLEIAKQ 509
Query: 381 AP 382
P
Sbjct: 510 MP 511
>gi|346467363|gb|AEO33526.1| hypothetical protein [Amblyomma maculatum]
Length = 656
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 171/312 (54%), Gaps = 21/312 (6%)
Query: 74 SGSHPYELEITALLENPRPEFDFSNVDLDLQ---RSDSFVWVETKSQLNELANALSKEFF 130
S HPYE EI +P E + + +L + VET QL +L ALSKE
Sbjct: 1 SYGHPYEWEIEHF--DPSQEQLKAPAEKNLPPPLEETPYTLVETPQQLQDLCTALSKETE 58
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E HS R+F G T L+QIST DY+VDT+ L E+ +L FA+P + KV HG+D
Sbjct: 59 IAVDLEHHSYRTFQGITCLMQISTRSHDYVVDTLKLRHELQVLNEVFANPKIIKVLHGAD 118
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRDF +Y+V LFDT +A VL SLA+LL YC V +K Q DWR RPL
Sbjct: 119 MDVLWLQRDFGLYLVGLFDTGQAARVLGLAHFSLAFLLRHYCRVEADKQFQLADWRIRPL 178
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
PA M+ YA++D HYLLYI CL ++L + N+N N + RS V L+ Y
Sbjct: 179 PAVMIHYARSDTHYLLYIMDCLKSDLADRSNKND-------NLLRSVFDRSKQVALKRYE 231
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K SY E + ++ + + ++ +R L AWRD +ARV DES +VL
Sbjct: 232 K--PSY-NEQSYLELY------RKSRKTFNTRQLHALRHLYAWRDHIARVEDESTGYVLP 282
Query: 371 DQAIIALANKAP 382
I+ ++ P
Sbjct: 283 KHMILEISEILP 294
>gi|449462768|ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 936
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 196/362 (54%), Gaps = 24/362 (6%)
Query: 28 RRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEI 83
+ R+ L P+ ++ + +PQ F +L +NS PF+H ++S HP E ++
Sbjct: 167 KDRKTLGVKPKVPFHIPTIRRPQDEFN-ILVNNSNQPFEHVWLQRSEDGIRFVHPLE-KL 224
Query: 84 TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSF 143
+ L + DF + F ++E + L ELA L FAVD E + RSF
Sbjct: 225 SVLDFVDKISEDFQPIYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSF 284
Query: 144 LGFTALIQISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
G T L+QIST EDY+VDT+ L + L+ F DP KV HG+D DV+WLQRDF I
Sbjct: 285 QGLTCLMQISTRTEDYVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGI 344
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
Y+ NLFDT +A VL + SL YLL +CGVA NK Q DWR RPLP EM++YA+ D
Sbjct: 345 YICNLFDTGQASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDT 404
Query: 263 HYLLYIAKCLVAELKQ--QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
HYLLYI + +L + +E S P ++E +RS+ VC+ +Y KE+ +
Sbjct: 405 HYLLYIYDLMRMKLASMPRESEESDLP------LVEVYKRSHDVCMHLYEKELLT----- 453
Query: 321 AASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
+S ++ L G G + +V L WRD++AR DES ++L ++ ++ +A +
Sbjct: 454 ESSYLYVYGLQGSGFDAQQLAVAAGLFE----WRDVVARAEDESTGYILPNKTLLEIAKQ 509
Query: 381 AP 382
P
Sbjct: 510 MP 511
>gi|392566464|gb|EIW59640.1| hypothetical protein TRAVEDRAFT_147720 [Trametes versicolor
FP-101664 SS1]
Length = 850
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 202/409 (49%), Gaps = 66/409 (16%)
Query: 32 KLNQCPQYSCYLQSEPKPQHNFKRVLAD--------------NSYSPFKHANKEKSSGS- 76
+L+ Q++ +L PKPQ +FKR + + N+ P + +E S G
Sbjct: 148 RLDPALQHASHL---PKPQLSFKRKVDNTNGVPWHPTLRHKYNAKVPLGYNLQEDSEGVE 204
Query: 77 -------HPYELEITALLENPRPEFDFSNVDLDLQRS---DSFVWVETKSQLNELANALS 126
HPY EI + P F+ + RS F WV T ++ + +
Sbjct: 205 EGPSSSLHPYRHEIKHI---SYPTRMFTPAPPIVPRSFEDTPFTWVSTSAEFAVMLEQMR 261
Query: 127 KEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVF 186
AVD E HS R+F GF L+QIST + D++VDTIAL DE+ L F DP V KVF
Sbjct: 262 GAREIAVDLEYHSYRTFAGFVCLMQISTREADFVVDTIALRDEMEELNEVFTDPDVVKVF 321
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWR 246
HG+++D++WLQ+DF++YVVNLFDT A +VL P+ LA LLE YC +K Q DWR
Sbjct: 322 HGAESDIVWLQQDFNLYVVNLFDTYHASKVLDFPRHGLATLLEMYCDFTADKRYQLADWR 381
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN-------------------ENSYCP 287
RPLP EMLQYA++D H+LL+I L L + E+SY P
Sbjct: 382 IRPLPEEMLQYARSDTHFLLFIYDNLRNALLDRAQSRAQSRAQSPSSSAATPTPESSYPP 441
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD-- 345
V E RS L+ Y KE+ Y + A + L + +S+ +V+ D
Sbjct: 442 --AHALVREVLSRSEETALREYEKEL--YDTDTGAGPGGWDTLARKWNKASLMAVSSDRE 497
Query: 346 ----------LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ R + WRD +AR DES R+VL + + +LA + PA+
Sbjct: 498 GATAVNVQRAVYRTVHGWRDRIAREEDESTRYVLPNHYLFSLAERTPAD 546
>gi|390603116|gb|EIN12508.1| hypothetical protein PUNSTDRAFT_97267 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 870
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 198/402 (49%), Gaps = 63/402 (15%)
Query: 32 KLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEK------------------- 72
+L+ Q++ +L+ KPQ +F R + + S P+K K K
Sbjct: 161 RLDPALQHASHLR---KPQLSFTRTVDNASQDPWKPTLKHKYNAQVPLGYRFQDEEGGDA 217
Query: 73 -SSGSHPYELEITALL--------ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELAN 123
S+G HPY EIT + P P F+ F WV T + +
Sbjct: 218 TSAGIHPYHYEITHVSYPAHLFSPGQPTPPKSFAET--------PFTWVATPAAFALMLE 269
Query: 124 ALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVC 183
L AVD E HS R+F GF L+QIST ED++VDT+ L DE+ L F DP +
Sbjct: 270 KLRLADAIAVDLEHHSYRTFAGFVCLMQISTRTEDWIVDTLVLRDELEELNEVFTDPRIV 329
Query: 184 KVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE 243
KVFHG+++D+ WLQ+DF+++VV LFDT A +VL P+ LA LLE YC +K Q
Sbjct: 330 KVFHGAESDIQWLQQDFNVFVVGLFDTFHASKVLHFPRHGLASLLEMYCDFIADKRYQLA 389
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC----------------- 286
DWR RPLP EML YA++D HYLLYI L L ++G ++
Sbjct: 390 DWRIRPLPQEMLDYARSDTHYLLYIYDHLRHALLERGTSPAFAAYTPVDITLETPISHLT 449
Query: 287 PDDKFNFVL-EASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSV 342
P D ++L E RS L+ + +E+ ++ G A ++ R N G ++ V
Sbjct: 450 PSDGATWLLREVLARSAQTTLRTFERELYDADNGTGPAGWDTL-ARKWNKSAG--AMPPV 506
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ + R + AWRD +AR DES R+VL + + +A PA+
Sbjct: 507 QRAVYRAVHAWRDRVAREEDESARYVLPNHYLFQIAESPPAD 548
>gi|297848030|ref|XP_002891896.1| hypothetical protein ARALYDRAFT_337734 [Arabidopsis lyrata subsp.
lyrata]
gi|297337738|gb|EFH68155.1| hypothetical protein ARALYDRAFT_337734 [Arabidopsis lyrata subsp.
lyrata]
Length = 681
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 197/376 (52%), Gaps = 27/376 (7%)
Query: 15 SLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSS 74
S AI + +R K + + +L + KPQ +K +L +N+ PF H EKS
Sbjct: 113 SKKAIDVKVAESNKRFEKHGKA-KAPFHLPTITKPQEEYK-ILVENANKPFDHVLLEKSE 170
Query: 75 GS----HPYE-LEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEF 129
HP E L + ++ E L L+ + F V+ L +LA L
Sbjct: 171 DGLRFVHPLEKLSVMDFVDKNLTEI-IPVKPLPLEET-PFKLVDEVKDLEDLAATLQSVE 228
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISI-LQPFFADPGVCKVFHG 188
FAVD E + RSF G T L+QIST EDY+VDT L D I L+ F DP KV HG
Sbjct: 229 EFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLWDHIGPHLRELFKDPKKKKVMHG 288
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+D+D++WLQRDF IYV NLFDT +A VL +KSL +LL+ YCGVA +K Q DWR R
Sbjct: 289 ADHDIIWLQRDFGIYVCNLFDTGQASRVLKLERKSLEFLLKHYCGVAADKQYQNADWRIR 348
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG--NENSYCPDDKFNFVLEASRRSNTVCL 306
PLP M +YA+ D HYLLYI + +L +E S P ++EA + S VC+
Sbjct: 349 PLPDVMTRYAREDTHYLLYIYDVMRIDLHTMAKEDEQSDSP------LVEAYKGSYDVCM 402
Query: 307 QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLR 366
Q+Y KE+ G++ + R N +++V +V LC WRD +AR DES
Sbjct: 403 QLYEKEL--LTGDSYLHTYGVRSGN-------LNAVQLSIVAGLCEWRDRIARADDESTG 453
Query: 367 FVLSDQAIIALANKAP 382
+VL ++ + +A P
Sbjct: 454 YVLPNKTLFDIAKDMP 469
>gi|297805136|ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata]
gi|297316288|gb|EFH46711.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 202/396 (51%), Gaps = 38/396 (9%)
Query: 4 KAKIKIAITIASLAA--ISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNS 61
K K + I LAA S++ + R + + + ++ + KPQ + +L +N+
Sbjct: 147 KKKKPVGNVITGLAANGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEY-NILVNNA 205
Query: 62 YSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFSNVDLDLQR--------SDSF 109
PF+H E+S HP LE ++L DF + DL+ F
Sbjct: 206 NQPFEHVWLERSEDDQRVMHP--LEKLSVL-------DFVDKDLNEMEPVKPLPLEETPF 256
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+V+ L EL L FAVD E + RSF G T L+QIST EDY+VDT L
Sbjct: 257 KFVQEVKDLKELVAKLRGVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLRIH 316
Query: 170 IS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
I L+ F DP K+ HG+D D++WLQRDF IYV NLFDT +A VL+ + SL +LL
Sbjct: 317 IGPYLREIFKDPKKKKIMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLGRNSLEFLL 376
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ +CGV NK Q DWR RPLP EM +YA+ D HYLLYI + EL++ ++ +
Sbjct: 377 QHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDVMRLELERMAKDDEHTDS 436
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+L+ +RS VC Q+Y KE+ + + + Q + ++ +V
Sbjct: 437 P----LLQVYKRSYDVCTQLYEKEL-------LTENSYLHVYGLQA--AGFNAAQLAIVA 483
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LC WRD +AR DES +VL ++ ++ +A + P +
Sbjct: 484 GLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPVS 519
>gi|440797552|gb|ELR18636.1| 3'5' exonuclease domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 929
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 156/273 (57%), Gaps = 16/273 (5%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V T L ++A L + FAVD E HS R+F GFT L+QIST ED++VDT+AL + +
Sbjct: 261 VATVKDLKDVAQKLDAQTEFAVDLEHHSYRTFQGFTCLMQISTRTEDFIVDTLALREHMH 320
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
+L F D + KVFHGSD+D+MWLQRDF +YV+N+FDT +AC VL P SLAYLL +
Sbjct: 321 LLSSSFHDANIVKVFHGSDSDIMWLQRDFGLYVINMFDTGQACRVLEYPSFSLAYLLRHH 380
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
CGV +K Q DWR RPLP EML+YA+ D HYLL+I L EL + N ++
Sbjct: 381 CGVLADKKYQLADWRIRPLPEEMLKYAREDTHYLLFIYDKLRNELIGRANMSN------- 433
Query: 292 NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLC 351
N +L RS +CL Y K + + + + F + N Q + +
Sbjct: 434 NLILAVLNRSRELCLLQYEKPLWTPTSHLSLYNRFNYVFNEQ---------QMRVFAAVY 484
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
WRD +AR DES R+VL + + +A P +
Sbjct: 485 KWRDTVAREEDESYRYVLPNHMLFHIAELVPTS 517
>gi|357146328|ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 906
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 207/398 (52%), Gaps = 43/398 (10%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFD- 95
++ S +PQ + R++ DN+ PF HA E+S HP E L + L + PE +
Sbjct: 196 HIPSIARPQ-DLYRIVVDNTSKPFAHAFLERSDDGCRAIHPLEKLPMEQLFDRRVPESEP 254
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
LD F +VE + L LA L FAVD E + RSF G T L+QIST
Sbjct: 255 LKPPALD---DTPFTFVEDRKTLEVLATKLKSATEFAVDLEHNHYRSFQGLTCLMQISTR 311
Query: 156 KEDYLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED++VDT+ L + L+ F DP KV HG+ D++WLQRDF IYV NLFDT +A
Sbjct: 312 TEDFIVDTLKLRKYLGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNLFDTGQAS 371
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+L + SL +LL +CGV NK Q DWR RPLP EM +YA+ D HYLLYI +
Sbjct: 372 RILQMDRNSLEHLLHHFCGVVANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIYDLMRL 431
Query: 275 ELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG 334
L NE+S D+ + +LE +RSN +CLQ+Y KE+ + +S ++ L
Sbjct: 432 RLV---NESS----DENDLLLEVCKRSNEICLQLYEKELLT-----DSSYLYIHGLK--- 476
Query: 335 GVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQ 394
+ +S+ ++ L WRD +AR DES ++L ++A++ +A + P
Sbjct: 477 -ENELSARQLAVLSGLYQWRDSVARAEDESTGYILPNKALLEIAKQMP------------ 523
Query: 395 ADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVEN 432
+ L ++ S +P + HL V + N +EN
Sbjct: 524 ----LTSGRLKRTVKSKNPFLERHLGHVITIIRNAIEN 557
>gi|166240642|ref|XP_645586.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
gi|165988709|gb|EAL71650.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
Length = 1195
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 176/326 (53%), Gaps = 21/326 (6%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI + + F WVET QL EL L A+D E
Sbjct: 214 HPYEYEINNFKYTEQQTQQCKEILARGLDETPFTWVETVRQLEELVEKLIHCQEIAIDLE 273
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
HS R++ GFT L+QIST ED+L+DT+ L I +L F +P + KV HGSD+D+ WL
Sbjct: 274 HHSYRTYQGFTCLMQISTRSEDFLIDTLLLRSHIHMLNQVFTNPSIVKVLHGSDSDIKWL 333
Query: 197 QRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQ 256
QRDF +Y+VN+FDT +A +L P SLA+LL+ YC + NK Q DWR R LP EM++
Sbjct: 334 QRDFGVYIVNMFDTGQASRILEYPSASLAFLLKFYCAIDANKKYQLADWRIRKLPEEMIK 393
Query: 257 YAQTDAHYLLYIAKCLVAELKQQGNEN----------SYCPDDKFN--FVLEASRRSNTV 304
YA+ D HYLLYI L EL +GN+N S + N +LE RRS +
Sbjct: 394 YAREDTHYLLYIYDRLRNELISKGNKNLGSSGTSTNTSTSTTTQLNNHLLLEVLRRSREL 453
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
L Y K+I + + F + LN Q + + ++++ L WR+ +AR DES
Sbjct: 454 SLLRYEKDI----LDDNSHINFAKKLNLQYSPTQL-----NVLKVLYHWREGLARDEDES 504
Query: 365 LRFVLSDQAIIALANKAPANRTDVYT 390
+R++L +Q ++ + + P + ++ T
Sbjct: 505 VRYILPNQMMLTIVERQPTSVQELLT 530
>gi|390368374|ref|XP_003731440.1| PREDICTED: exosome component 10-like, partial [Strongylocentrotus
purpuratus]
Length = 776
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 174/330 (52%), Gaps = 17/330 (5%)
Query: 60 NSYSPFKHANKEKSSG-SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQL 118
+S SP K ++ ++ HPY+ E+ L P N + F V+T S+L
Sbjct: 68 DSSSPAKRDSETQTEAYPHPYQHELDHLEPLPSQLEPVDNPSYTPLEATPFTLVDTVSKL 127
Query: 119 NELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFA 178
EL+ +L + AVD E HS RS+LGFT L+QIST + DY+VDT+ L E+ +L F
Sbjct: 128 EELSRSLKQSKEIAVDLEHHSYRSYLGFTCLMQISTAEHDYVVDTLELRSELQMLNDAFT 187
Query: 179 DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 238
DP + KVFHG++ D WLQRD +YVVN+FDT +A L P SLA LL YC V +K
Sbjct: 188 DPKIVKVFHGANMDFDWLQRDLGLYVVNMFDTHQASRSLGFPHHSLASLLSRYCQVEADK 247
Query: 239 FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEAS 298
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN D+ N +
Sbjct: 248 QYQLADWRIRPLPEEMLHYAREDTHYLLYIYHTMKNELIKRGN-------DRRNLLRAVL 300
Query: 299 RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMA 358
+S +C+Q Y K I + A ++ N + ++L AWRD +A
Sbjct: 301 DQSTRICVQRYNKPIFTNDSHVTAFQKNRKIFNKK---------QMHAFKKLFAWRDSLA 351
Query: 359 RVHDESLRFVLSDQAIIALANKAPANRTDV 388
R DES ++L + +A P ++ +
Sbjct: 352 RQEDESTGYILPMHMLFQIAEILPKDQGGI 381
>gi|302776536|ref|XP_002971426.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
gi|300160558|gb|EFJ27175.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
Length = 512
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 190/347 (54%), Gaps = 32/347 (9%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDL 101
+++S P+PQ F ADNS SPFKH ++E+ S Y L E P D
Sbjct: 165 HVRSLPRPQDKFD-YPADNSNSPFKHLSREEELTSMEY------LKEFPADGPDEPVKPK 217
Query: 102 DLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLV 161
L + F+ VE+ L +A L AVD E H RSF GF L+Q+ST +D++V
Sbjct: 218 SLSETPLFI-VESLPALETMAAKLHASSEIAVDLENHHYRSFQGFVCLMQVSTRSQDFIV 276
Query: 162 DTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
DT+ L I +L+ FA+P + KV HGSD D++WLQRDF IYV NLFDT +A VL
Sbjct: 277 DTLVLRSHIGPVLRSVFANPSIRKVIHGSDRDILWLQRDFGIYVCNLFDTGQAARVLRME 336
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ-Q 279
+ LA+LL+T+CGV +K Q DWR RPL AEML+YA+ D HYLLY+ + L+ +
Sbjct: 337 RFGLAFLLQTFCGVTPDKRYQLADWRLRPLSAEMLKYAREDTHYLLYVYDKMKGMLRDAE 396
Query: 280 GNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
E+ Y LE +RS +CLQ+Y KE+ + E++ I+ G++
Sbjct: 397 TTEDLY---------LEVCQRSRDLCLQLYEKELFT---ESSFLHIY--------GLAEK 436
Query: 340 SSVTQDL--VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ + L V L AWRD + R DES ++L + + LA AP +
Sbjct: 437 NLTPEKLAIVAGLYAWRDKLCRSEDESTGYILPNSLLFRLAEDAPQD 483
>gi|334188034|ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
gi|160892401|gb|ABX52080.1| RRP6-like protein 2 [Arabidopsis thaliana]
gi|332006642|gb|AED94025.1| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
Length = 870
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 207/397 (52%), Gaps = 42/397 (10%)
Query: 4 KAKIKIAITIASLAAI----SILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLAD 59
K K + + AA+ S++ + R + + + ++ + KPQ + +L +
Sbjct: 149 KKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEY-NILVN 207
Query: 60 NSYSPFKHANKEKSS----GSHPYELEITALLENPRPEFDFSNVDLD---------LQRS 106
N+ PF+H E+S HP LE ++L DF + D++ L+++
Sbjct: 208 NANLPFEHVWLERSEDDLRAMHP--LEKFSVL-------DFVDKDVNEMEPVKPLPLEQT 258
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
F +V+ L EL L FAVD E + RSF G T L+QIST EDY+VDT L
Sbjct: 259 -PFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKL 317
Query: 167 HDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
I L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A VL+ + SL
Sbjct: 318 RIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERNSLE 377
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
+LL+ +CGV NK Q DWR RPLP EM +YA+ D HYLLYI + EL++ ++++
Sbjct: 378 FLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKDDAH 437
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+ +LE +RS VC Q+Y KE+ + + + Q + ++
Sbjct: 438 TD----SPLLEVYKRSYDVCTQLYEKEL-------LTENSYLHVYGLQA--AGFNAAQLA 484
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+V LC WRD +AR DES +VL ++ ++ +A + P
Sbjct: 485 IVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMP 521
>gi|330802281|ref|XP_003289147.1| hypothetical protein DICPUDRAFT_153473 [Dictyostelium purpureum]
gi|325080770|gb|EGC34311.1| hypothetical protein DICPUDRAFT_153473 [Dictyostelium purpureum]
Length = 1045
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 169/307 (55%), Gaps = 16/307 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI + + + W+++ QL EL + LS FA+D E
Sbjct: 219 HPYEYEINNFKYTEKQNQSCKEILSRGLEETPYTWIDSVRQLEELCDKLSHVEEFAMDLE 278
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
H+ RS+ GF L+QIST ED+++DT+AL I +L +P + KV HGSD+D+ WL
Sbjct: 279 HHNYRSYQGFVCLMQISTRGEDFIIDTLALRSHIHMLNNVTTNPAIVKVLHGSDSDIKWL 338
Query: 197 QRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQ 256
QRDF IY+VN+FDT +A VL P SLA+LL+ +C V NK Q DWR R +P EM++
Sbjct: 339 QRDFGIYIVNMFDTGQASRVLEYPSASLAFLLKYFCAVDANKKYQLADWRIRKIPEEMIK 398
Query: 257 YAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESY 316
YA+ D HYLLYI L EL +G ++ N +LE RRS + L Y KEI
Sbjct: 399 YAREDTHYLLYIYDRLRNELINKGKGSN-------NLLLEVLRRSRELALLKYEKEI--- 448
Query: 317 PGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
+ F + LN Q + V ++++ + WR+ +AR DES+R+VL +Q + +
Sbjct: 449 -LDDNTHIQFAKKLNLQ-----YNPVQLNVLKVIYHWREGLAREEDESVRYVLPNQMMFS 502
Query: 377 LANKAPA 383
+ P
Sbjct: 503 IIENQPV 509
>gi|390345989|ref|XP_001198503.2| PREDICTED: exosome component 10 [Strongylocentrotus purpuratus]
Length = 752
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 179/333 (53%), Gaps = 23/333 (6%)
Query: 60 NSYSPFKHANKEKSSG-SHPYELEITALLENP---RPEFDFSNVDLDLQRSDSFVWVETK 115
+S SP K ++ ++ HPY+ E+ L P P D S L+ + F V+T
Sbjct: 214 DSSSPAKRDSETQTEAYPHPYQHELDHLEPLPSQLEPVDDPSYTPLE---ATPFTLVDTV 270
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
S+L EL+ +L + AVD E HS RS+LGFT L+QIST + DY+VDT+ L E+ +L
Sbjct: 271 SKLEELSRSLKQSKEIAVDLEHHSYRSYLGFTCLMQISTAEHDYVVDTLELRSELQMLND 330
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
F DP + KVFHG++ D+ WLQRD +YVVN+FDT +A L P SLA LL YC V
Sbjct: 331 AFTDPKIVKVFHGANMDIDWLQRDLGLYVVNMFDTHQASRSLGFPHHSLASLLSRYCQVE 390
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
+K Q DWR RPLP EML YA+ D HYLLYI + EL ++GN D+ N +
Sbjct: 391 ADKQYQLADWRIRPLPEEMLHYAREDTHYLLYIYHTMKNELIKRGN-------DRRNLLR 443
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
+S +C+Q Y K I + A ++ N + ++L AWRD
Sbjct: 444 AVLDQSTRICVQRYNKPIFTNDSHVTAFQKNRKIFNKK---------QMHAFKKLFAWRD 494
Query: 356 LMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+AR DES ++L + +A P ++ +
Sbjct: 495 SLARQEDESTGYILPMHMLFQIAEILPKDQGGI 527
>gi|326521328|dbj|BAJ96867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 196/363 (53%), Gaps = 28/363 (7%)
Query: 37 PQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPR 91
P+ ++ + P+PQ + R++ DN+ PF HA E+S HP E L + L +
Sbjct: 192 PKVPFHIPTIPRPQ-DVHRIVVDNTSKPFDHAFLERSDDGARAIHPLEKLPMEQLFDRRV 250
Query: 92 PEFD-FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALI 150
PE + LD F +VE + L L L FAVD E + RSF G T L+
Sbjct: 251 PESEPLKPPALD---DTPFTFVEDRRTLEVLVTKLKSATEFAVDLEHNHYRSFQGLTCLM 307
Query: 151 QISTEKEDYLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
QIST ED++VDT+ L + + L+ F DP KV HG+ D++WLQRDF IYV NLFD
Sbjct: 308 QISTRTEDFIVDTLKLRNCLGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNLFD 367
Query: 210 TAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIA 269
T +A +L + SL +LL+ +CGV NK Q DWR RPLP EM +YA+ D HYLLYI
Sbjct: 368 TGQASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIY 427
Query: 270 KCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRL 329
+ L NE+S DD +LE +RSN +CLQ+Y KE+ + +S ++
Sbjct: 428 DLMRLRLV---NESSG--DD---LLLEVCKRSNEICLQLYEKELLT-----DSSYLYIHG 474
Query: 330 LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
L + +S+ ++ L WRD +AR DES ++L ++ ++ +A + P +
Sbjct: 475 LK----ENDLSARQLAVLAGLYQWRDGVARAEDESTGYILPNKTLLEIAKQMPVTTGRLK 530
Query: 390 TTI 392
T+
Sbjct: 531 RTV 533
>gi|405969148|gb|EKC34144.1| Exosome component 10, partial [Crassostrea gigas]
Length = 309
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 166/284 (58%), Gaps = 22/284 (7%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+V T +L+ + + L KE AVD E HS RSF G T L+QIST +D+L+DT+AL +
Sbjct: 11 LTFVSTVIELSSVIDKLRKEHIVAVDLEHHSYRSFQGITCLMQISTATDDFLIDTLALRN 70
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
++S L F P V KVFHG+D+D+ WLQRD +YVVN+FDT +A VL+ + SLA+L+
Sbjct: 71 DLSPLNEIFTHPAVVKVFHGADSDIDWLQRDLGLYVVNMFDTGQAARVLNHSRFSLAHLM 130
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
E YC V T+K Q DWR RPLPAE+++YA+ D HYL YI + + EL +GN
Sbjct: 131 EHYCDVITDKQYQLADWRIRPLPAELMKYAREDTHYLTYIYQRMKQELLARGN------- 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
D+ N +L +RS +C +VY K++ +SY S F Q
Sbjct: 184 DQKNLLLSVLQRSTEICAKVYKKQVFKEDSYLELYRKSKKVFNSRQLQA----------- 232
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
+++L WRD +AR DES +VL + I+ +A+ P + ++
Sbjct: 233 -LQKLYQWRDKLARQEDESTGYVLPNHMILQIADILPREQQGIF 275
>gi|26452498|dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 578
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 206/397 (51%), Gaps = 42/397 (10%)
Query: 4 KAKIKIAITIASLAAI----SILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLAD 59
K K + + AA+ S++ + R + + + ++ + KPQ + +L +
Sbjct: 149 KKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEYN-ILVN 207
Query: 60 NSYSPFKHANKEKSS----GSHPYELEITALLENPRPEFDFSNVDLD---------LQRS 106
N+ PF+H E+S HP LE ++L DF + D++ L+++
Sbjct: 208 NANLPFEHVWLERSEDDLRAMHP--LEKFSVL-------DFVDKDVNEMEPVKPLPLEQT 258
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
F +V+ L EL L FAVD E + RSF G T L+QIST EDY+VDT L
Sbjct: 259 -PFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKL 317
Query: 167 HDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
I L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A VL+ + SL
Sbjct: 318 RIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLERNSLE 377
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
+LL+ +CGV NK Q DWR RPLP EM +YA+ D HYLLYI + EL++ ++++
Sbjct: 378 FLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIKLELQRMAKDDAH 437
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+LE +RS VC Q+Y KE+ + + + Q + ++
Sbjct: 438 TDSP----LLEVYKRSYDVCTQLYEKEL-------LTENSYLHVYGLQA--AGFNAAQLA 484
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+V LC WRD +AR DES +VL ++ ++ +A + P
Sbjct: 485 IVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMP 521
>gi|326502996|dbj|BAJ99123.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 156/281 (55%), Gaps = 17/281 (6%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F VE L EL N L FAVD E + RSF G T L+QIST ED+++DT+ L
Sbjct: 33 FTLVEDLKGLTELVNKLKDVNEFAVDLEHNQYRSFQGLTCLMQISTRSEDFIIDTLKLRI 92
Query: 169 EI-SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
I S L+ F DP KV HG+D D+MWLQRDF +YV NLFDT +A VL + SL +L
Sbjct: 93 YIGSYLKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNLFDTGQASRVLQMERNSLEHL 152
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
L +CGV NK Q DWR RPL EM++YA+ D HYLLYI + L+++ +
Sbjct: 153 LHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTHYLLYIYDLMRLRLQRESTSEN--- 209
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ +LE +RSN +CLQ+Y KE+ + + Q +++ +V
Sbjct: 210 ----DLLLEVQKRSNDICLQLYEKEL-------LTDKSYLHIYGLQ--EHELTAAQLAVV 256
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L WRD +AR DES +VL ++A+I +A K P D+
Sbjct: 257 SALHQWRDYIARDQDESTGYVLPNKALIEIAKKMPTTTADL 297
>gi|357120688|ref|XP_003562057.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 690
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 185/350 (52%), Gaps = 25/350 (7%)
Query: 45 SEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFDFSNV 99
S P+PQ + + +N PF H E S HP E L + L++ PE +
Sbjct: 85 SIPRPQDVY-LIRVNNCNLPFDHVWLEPSEDGTRRIHPLEKLPLEQLIDRNVPEIEPVR- 142
Query: 100 DLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
D++ S F VE L EL + L FAVD E + RSF G T L+QIST ED+
Sbjct: 143 PADVEDS-PFTLVEDLKGLMELVDKLKDVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 201
Query: 160 LVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS 218
+VDT+ L + LQ F DP KV HG+D D++WLQRDF IYV NLFDT +A VL
Sbjct: 202 IVDTLKLRIYLGPYLQKHFKDPTKRKVMHGADRDIIWLQRDFRIYVCNLFDTGQASRVLQ 261
Query: 219 KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
+ SL +LL +CGV NK Q DWR RPL EM++YA+ D HYLLYI + L++
Sbjct: 262 MERNSLEHLLHHFCGVTANKVYQNADWRSRPLSDEMIKYAREDTHYLLYIYDLMRLRLQK 321
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
+ S C +D +LE RSN +CLQ+Y KE+ + + + Q
Sbjct: 322 E----STCEND---LLLEVQNRSNEICLQLYEKEL-------LTDTSYLHIYGLQE--HE 365
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ + +V L WRD AR DES +VL ++A+I +A K P + ++
Sbjct: 366 LEAAQLAVVSALHQWRDYTARQEDESTGYVLPNKALIEIAKKMPTSTAEL 415
>gi|221121078|ref|XP_002157951.1| PREDICTED: exosome component 10-like [Hydra magnipapillata]
Length = 758
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 180/358 (50%), Gaps = 46/358 (12%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-----------------SHPYELEITAL---- 86
+PQ F + DNS PF K+K + SHPY E++ L
Sbjct: 164 RPQLKFINKI-DNSNKPFVPYIKQKHNAIKRDILSDFRTEIEDFESHPYAYELSKLEPHD 222
Query: 87 --LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFL 144
LE P + +D + + +++T LN+L N L K AVD E HS RSF
Sbjct: 223 WQLEEAEP-LKYPMLD-----TTNLTYIDTDEGLNDLINKLKKVKEIAVDLEHHSYRSFQ 276
Query: 145 GFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV 204
GF L+QIST ED+++DT+AL +E+ + F+DP + KV HG+D+D+ WLQRDF +YV
Sbjct: 277 GFLCLMQISTRFEDFIIDTLALREEMYKINEIFSDPNILKVMHGADSDIGWLQRDFGVYV 336
Query: 205 VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
VN+FDT +A L + + SLAYLL YC V K Q DWR RP+P EM+ YAQ D HY
Sbjct: 337 VNMFDTGQAARTLHEDRFSLAYLLSKYCNVDAQKQYQLADWRIRPIPKEMILYAQEDTHY 396
Query: 265 LLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASS 324
LLY+ L +L +GN N N + +S ++C +Y K + + A
Sbjct: 397 LLYVYDILRNQLLNKGNANK-------NLLKSVYSKSTSICATMYQKPLFNNDSYIATYE 449
Query: 325 IFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ LN Q + R L WRD AR DES+ + L + + +A P
Sbjct: 450 KYRGRLNPQ---------QLECFRLLFEWRDKTAREEDESIVYTLPNHMLFQIAENLP 498
>gi|449548764|gb|EMD39730.1| hypothetical protein CERSUDRAFT_112032 [Ceriporiopsis subvermispora
B]
Length = 850
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 210/425 (49%), Gaps = 56/425 (13%)
Query: 12 TIASLAAISILFTRQQRRRR------KLNQCPQYSCYLQSEPKPQHNFKRVLADNS---Y 62
T A A++ T Q+ R+ +L+ Q++ +L KPQ F R +NS +
Sbjct: 120 TKAPAIAVNPAQTAAQKTRKPNAPPGRLDPALQHAAHLA---KPQLQFARKPDNNSNTIW 176
Query: 63 SP-FKH----------------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQR 105
+P +H + E S+ HPY EIT + P F ++
Sbjct: 177 TPTLRHKYNAQVPLGYNYRSDDGHDEGSASLHPYRYEITHT-DYPARMFRTASPVAPRGF 235
Query: 106 SDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
+D+ F WV ++ +E+ L A+D E HS RSF GF L+QIST + D++VD +
Sbjct: 236 ADTQFTWVADRAAFDEMLAHLRTAQEIALDLEHHSFRSFGGFVCLMQISTRERDFIVDVL 295
Query: 165 ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 224
+ +E+ L DP + KV HG+++D++WLQ+DF++YVVNLFDT A +VL P+ +L
Sbjct: 296 QVREEMEELNEVLTDPRIVKVLHGAESDIVWLQQDFNLYVVNLFDTYHASKVLEFPRHNL 355
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
LLE YC +K Q DWR RPLP EMLQYA++D H+LLYI L L + +
Sbjct: 356 GTLLEMYCDFTPDKRYQLADWRIRPLPEEMLQYARSDTHFLLYIYDNLRNALLDRAQSRA 415
Query: 285 YCP---------------DDKFNFVLEASRRSNTVCLQVYTKE---IESYPGEAAASSIF 326
P D V E RS T L+VY KE + G ++
Sbjct: 416 QSPSASASTPPSPAGADTDPAHALVREVLARSATTALRVYEKERYDPDQGLGPGGWDTLA 475
Query: 327 FRLLNG-------QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
+ G G S+++ + + R + AWRD ++R DES R+VL + A+ ALA
Sbjct: 476 RKWNKGALVAPPVHGADSAVARTQRAVYRAVHAWRDRVSRAEDESTRYVLPNHALFALAE 535
Query: 380 KAPAN 384
+ PA+
Sbjct: 536 RTPAD 540
>gi|198421501|ref|XP_002119853.1| PREDICTED: similar to exosome component 10, partial [Ciona
intestinalis]
Length = 647
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 173/312 (55%), Gaps = 25/312 (8%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPY+ E+ ++ LE P P + +D DS ++V+ + L++L + L +
Sbjct: 32 HPYKYELQHFKPLSSQLEKPTP-VKYGPID-----PDSCIFVDQVNALHKLMDELKEASE 85
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E HS RS+ G T L+Q+ST +DY+VDTIAL E++IL FA+P + KVFHG+D
Sbjct: 86 IAVDLEAHSYRSYQGITCLMQLSTRTKDYIVDTIALRAELNILNQVFANPNIIKVFHGAD 145
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D++WLQRDF IYVVNLFDT +A L + SL YLL YC V +K Q DWR RPL
Sbjct: 146 SDIIWLQRDFGIYVVNLFDTGQAARALGLQRHSLDYLLTHYCNVQADKKYQLADWRIRPL 205
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EML YAQ D HYLLY+ + +L + G+ + V++ SR +C Y
Sbjct: 206 PKEMLLYAQGDTHYLLYVYDMMRLDLVKTGDPGL------LHKVIDKSR---DICCLKYE 256
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K I + + + +GG + +R + AWRD +AR DES +VL
Sbjct: 257 KPITN----DTSHLVLLEKHKRRGGKKDFRPQQIEALRLIFAWRDGLARQEDESCGYVLP 312
Query: 371 DQAIIALANKAP 382
+ ++ +A P
Sbjct: 313 NHMLLQIAEILP 324
>gi|302765286|ref|XP_002966064.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
gi|300166878|gb|EFJ33484.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
Length = 512
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 190/347 (54%), Gaps = 32/347 (9%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDL 101
+++S P+PQ F ADNS SPFKH ++E+ S Y E A + P D
Sbjct: 165 HVRSLPRPQDKFD-YPADNSNSPFKHLSREEELTSMEYMKEFPA--DGP----DEPVKPK 217
Query: 102 DLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLV 161
L + F+ VE+ L +A L AVD E H RSF GF L+Q+ST +D++V
Sbjct: 218 SLSETPLFI-VESLPALETMAAKLRASSEIAVDLENHHYRSFQGFVCLMQVSTRSQDFIV 276
Query: 162 DTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
DT+ L I +L+ FA+P + KV HGSD D++WLQRDF IYV NLFDT +A VL
Sbjct: 277 DTLVLRSHIGPVLRSVFANPSIRKVIHGSDRDILWLQRDFGIYVCNLFDTGQAARVLRME 336
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ-Q 279
+ LA+LL+T+C V +K Q DWR RPL AEML+YA+ D HYLLY+ + L+ +
Sbjct: 337 RFGLAFLLQTFCEVTPDKRYQLADWRLRPLSAEMLKYAREDTHYLLYVYDKMKGLLRDAE 396
Query: 280 GNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
E+ Y LE +RS +CLQ+Y KE+ + E++ I+ G++
Sbjct: 397 TTEDLY---------LEVCQRSRDLCLQLYEKELFT---ESSFLHIY--------GLAEK 436
Query: 340 SSVTQDL--VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ + L V L AWRD + R DES ++L + + LA AP +
Sbjct: 437 NLTPEKLAIVAGLYAWRDKLCRSEDESTGYILPNSLLFRLAEDAPQD 483
>gi|10176710|dbj|BAB09932.1| nucleolar protein-like [Arabidopsis thaliana]
Length = 834
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 189/349 (54%), Gaps = 37/349 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSS----GSHPYELEITALLENPRPEFDFSNVDLD- 102
KPQ + +L +N+ PF+H E+S HP LE ++L DF + D++
Sbjct: 160 KPQEEY-NILVNNANLPFEHVWLERSEDDLRAMHP--LEKFSVL-------DFVDKDVNE 209
Query: 103 --------LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIST 154
L+++ F +V+ L EL L FAVD E + RSF G T L+QIST
Sbjct: 210 MEPVKPLPLEQT-PFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLMQIST 268
Query: 155 EKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKA 213
EDY+VDT L I L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 269 RTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQA 328
Query: 214 CEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLV 273
VL+ + SL +LL+ +CGV NK Q DWR RPLP EM +YA+ D HYLLYI +
Sbjct: 329 SRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIK 388
Query: 274 AELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
EL++ ++++ +LE +RS VC Q+Y KE+ + S + L
Sbjct: 389 LELQRMAKDDAHTDSP----LLEVYKRSYDVCTQLYEKELLT-----ENSYLHVYGLQAA 439
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
G ++ ++ + LC WRD +AR DES +VL ++ ++ +A + P
Sbjct: 440 GFNAAQLAI---VAVGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMP 485
>gi|414871320|tpg|DAA49877.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 901
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 188/347 (54%), Gaps = 25/347 (7%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFDF 96
++++ P+PQ + ++ DNS PF+H ++S HP E L + ++ P D
Sbjct: 194 HIRTIPRPQDVYC-IVVDNSSKPFEHILLDRSEDGTRVVHPLEKLPVEQIISRNVP--DN 250
Query: 97 SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK 156
V + F +VE L LA L FAVD E + RSF G T L+QIST
Sbjct: 251 EPVKPPALDNTPFTFVEDLKTLEVLATKLKDATEFAVDLEHNHYRSFQGLTCLMQISTRT 310
Query: 157 EDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACE 215
ED++VDT+ L + L+ FF DP KV HG+ D++WLQRDF IYV NLFDT +A +
Sbjct: 311 EDFIVDTLKLRKYLGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNLFDTGQASK 370
Query: 216 VLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAE 275
VL + SL +LL +CGVA NK Q DWR RPLP EM++YA+ D HYLLYI +
Sbjct: 371 VLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDLMRLR 430
Query: 276 LKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGG 335
L S C +D +LE +RSN +CLQ+Y KE + + ++G
Sbjct: 431 LVN----GSSCEND---LLLEVCKRSNEICLQLYEKE--------QLTDTSYLHIHGL-K 474
Query: 336 VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +++ ++ L WRD +AR DES ++L ++ ++ +A + P
Sbjct: 475 ENELNATQLSVLSSLYRWRDGIARAEDESTGYILPNKTLLEIAKEMP 521
>gi|359481017|ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
Length = 931
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 192/360 (53%), Gaps = 39/360 (10%)
Query: 37 PQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRP 92
P+ ++ + P+PQ F +L +NS PF+H ++S HP LE +LL
Sbjct: 172 PRVPFHIPTIPRPQDEFN-ILVNNSNQPFQHVWLQRSDDGLRFIHP--LEKLSLL----- 223
Query: 93 EFDFSNVDL-DLQ-------RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFL 144
DF + ++ DL F VE L ELA L FAVD E + RSF
Sbjct: 224 --DFVDKNIGDLMPVMPPSIEDTPFKLVEEVRDLKELAAKLCCVNEFAVDLEHNQYRSFQ 281
Query: 145 GFTALIQISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIY 203
G T L+QIST ED++VDT+ L + L+ F DP KV HG+D D++WLQRDF IY
Sbjct: 282 GLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPTKKKVMHGADRDIIWLQRDFGIY 341
Query: 204 VVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAH 263
+ N+FDT +A VL + SL +LL YCGV NK Q DWR RPLP EML+YA+ D H
Sbjct: 342 ICNMFDTGQASRVLKLERNSLEHLLHHYCGVTANKEYQNGDWRLRPLPHEMLRYAREDTH 401
Query: 264 YLLYIAKCLVAELKQQGN-ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAA 322
YLL+I + +L ENS +LE +RS +C+Q+Y KE+ + +
Sbjct: 402 YLLHIYDLMRTQLLSMAELENSNA------LLLEVYKRSFDICMQLYEKELLT-----DS 450
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
S ++ L G + ++ +V L WRD++AR DES ++L ++ ++ +A + P
Sbjct: 451 SYLYTYGLQG----AHFNAQQLAIVAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMP 506
>gi|301119505|ref|XP_002907480.1| exosome complex exonuclease RRP6-like protein [Phytophthora
infestans T30-4]
gi|262105992|gb|EEY64044.1| exosome complex exonuclease RRP6-like protein [Phytophthora
infestans T30-4]
Length = 1465
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 197/370 (53%), Gaps = 39/370 (10%)
Query: 45 SEPKPQHNFKRVLADNSYSPFKHANKEKSSG-------------------SHPYELEITA 85
++ KPQ F + DNS +PF +EK +PY EI
Sbjct: 161 AQDKPQDRFDEKI-DNSDAPFVSKLREKVHALINGAATVVADDEDDEMAPRNPYYPEIKG 219
Query: 86 LLENP----RPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALS--KEFFFAVDTEQHS 139
L P E + + LD S++WV+++ L ++ +L+ + AVD E HS
Sbjct: 220 LKYAPWQLEASEEPYEMIGLD---KVSYLWVDSEENLMQMMKSLTAAEARVIAVDLEHHS 276
Query: 140 LRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRD 199
RS++G T L+QIST +ED+LVDT+AL ++ L F DP KV HGSD D++WLQRD
Sbjct: 277 YRSYMGLTCLMQISTAQEDFLVDTLALRGKLQTLNQVFCDPEKVKVLHGSDMDILWLQRD 336
Query: 200 FHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQ 259
+Y+VNLFDT +A +L P+ SLAY+L+ +C + +K Q DWR RPL M++YA+
Sbjct: 337 LGLYIVNLFDTGRAARLLQYPRFSLAYMLKRHCNIDADKQYQLADWRTRPLDKNMVKYAR 396
Query: 260 TDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGE 319
D YLL+I L EL Q G ++ + + + + + S+ +CLQVY K P E
Sbjct: 397 EDTRYLLFIYDRLKKELLQAGAKS------RESLLFQTLQNSSKLCLQVYEK---PQPTE 447
Query: 320 AAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
A ++ + L G + +S++ + ++ L WRD +AR DES+ +V+ + ++ L
Sbjct: 448 EDALAVGEK-LKGTVYLRDLSALQKRVIVALYLWRDRVARQEDESVAYVMPNHVLMKLTK 506
Query: 380 KAPANRTDVY 389
P D++
Sbjct: 507 HLPVRSDDLF 516
>gi|426195548|gb|EKV45477.1| hypothetical protein AGABI2DRAFT_186278 [Agaricus bisporus var.
bisporus H97]
Length = 870
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 189/385 (49%), Gaps = 57/385 (14%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSG-------------------SHPYELEITALL 87
PKPQ +FK ADN +P+ + K + +HPY EI +
Sbjct: 182 PKPQLSFK-YKADNDDAPWYPSLTHKYNALVPLGHVYTDADDDTTVIANHPYRYEINHIT 240
Query: 88 --------ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHS 139
NP P + + W+ L + L AVD E HS
Sbjct: 241 YPSHVYAPANPSPPASLAET--------PYSWISNPDGLQNMLTKLRAASEIAVDLEHHS 292
Query: 140 LRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRD 199
R++LGF L+QIST +ED++VD IAL DE+ +L F DP + KVFHG+++D++WLQ+D
Sbjct: 293 YRTYLGFLCLMQISTREEDFVVDVIALRDEMEVLNEVFTDPKIVKVFHGAESDIVWLQQD 352
Query: 200 FHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQ 259
F++YVVNLFDT A ++L P+ LA LLE YC +K Q DWR RPLP EML+YA+
Sbjct: 353 FNLYVVNLFDTYHASKLLEFPRHGLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYAR 412
Query: 260 TDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEAS-----RRSNTVCLQVYTKEIE 314
+D H+LL+I L L +G S P N L AS RS+ CL+VY KE+
Sbjct: 413 SDTHFLLFIYDNLRNALLDRGGPASRSPHASKN-PLHASINHVLTRSSETCLRVYVKEVY 471
Query: 315 SYPGEAAA---------------SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMAR 359
+ +++ F + S+ + + + R + WR+ ++R
Sbjct: 472 DRSSGTGSNGWDTLARKWNKPLFTALSFSYQSSSDEGHSVPEMQKAVYRAVHWWRESVSR 531
Query: 360 VHDESLRFVLSDQAIIALANKAPAN 384
DES R+VL +Q + +A P +
Sbjct: 532 EEDESTRYVLPNQYLFRIAEAPPGD 556
>gi|296085897|emb|CBI31221.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 188/360 (52%), Gaps = 39/360 (10%)
Query: 37 PQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRP 92
P+ ++ + P+PQ F +L +NS PF+H ++S HP LE +LL
Sbjct: 142 PRVPFHIPTIPRPQDEFN-ILVNNSNQPFQHVWLQRSDDGLRFIHP--LEKLSLL----- 193
Query: 93 EFDFSNVDL-DLQ-------RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFL 144
DF + ++ DL F VE L ELA L FAVD E + RSF
Sbjct: 194 --DFVDKNIGDLMPVMPPSIEDTPFKLVEEVRDLKELAAKLCCVNEFAVDLEHNQYRSFQ 251
Query: 145 GFTALIQISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIY 203
G T L+QIST ED++VDT+ L + L+ F DP KV HG+D D++WLQRDF IY
Sbjct: 252 GLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPTKKKVMHGADRDIIWLQRDFGIY 311
Query: 204 VVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAH 263
+ N+FDT +A VL + SL +LL YCGV NK Q DWR RPLP EML+YA+ D H
Sbjct: 312 ICNMFDTGQASRVLKLERNSLEHLLHHYCGVTANKEYQNGDWRLRPLPHEMLRYAREDTH 371
Query: 264 YLLYIAKCLVAELKQQGN-ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAA 322
YLL+I + +L ENS +LE +RS +C+Q+Y KE+
Sbjct: 372 YLLHIYDLMRTQLLSMAELENSNA------LLLEVYKRSFDICMQLYEKEL-------LT 418
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
S + QG + + +V L WRD++AR DES ++L ++ ++ +A + P
Sbjct: 419 DSSYLYTYGLQGAHFNAQQLA--IVAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMP 476
>gi|268532256|ref|XP_002631256.1| C. briggsae CBR-CRN-3 protein [Caenorhabditis briggsae]
Length = 868
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 205/425 (48%), Gaps = 71/425 (16%)
Query: 3 KKAKIKIAITIASLAA-ISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNS 61
+K + ++A + + +A I + + R RR + + + KPQ + + +DNS
Sbjct: 142 RKTEAEVAEAMKTFSANIGTVLAAKFRERR------EEAAQMVVHEKPQRTYN-ITSDNS 194
Query: 62 YSPF------KHANKEKSSG-----------------------SHPYELEITALLENPRP 92
+PF KH E+ SG HPY I +L P
Sbjct: 195 SAPFASKLTVKHHAVERRSGIVVVDDNESGQRDWISASAETEEEHPY---IAEMLHFKVP 251
Query: 93 EFDFSNV---DLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
E +V V+TK +L L + L+ F+VD E H +R++LG T L
Sbjct: 252 EKQLKSVTPQKFKTLTETPLTIVDTKEKLESLRDKLNSVEEFSVDLEHHEMRTYLGLTCL 311
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQIST ED+++D + D I IL F +P + KVFHGSDNDV+WLQRDF ++VVNLFD
Sbjct: 312 IQISTRDEDFIIDPFPMWDRIGILNEPFTNPNILKVFHGSDNDVLWLQRDFGVHVVNLFD 371
Query: 210 TAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIA 269
T A + L P+ SLAYL + V +K Q DWR RPL M+ YA+ D HYLLY
Sbjct: 372 TYVAMKKLKYPKFSLAYLAFRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSY 431
Query: 270 KCLVAELKQQGN---ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
L +L QQG+ EN Y SN +C++VY K + + + + I
Sbjct: 432 DMLREQLLQQGHKDLENVYA-------------ESNDLCIRVYKKPV--FNPKGYMTEIK 476
Query: 327 FRL-LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
FR LN + + S L WRD++AR DES +FVL + +++LA P +
Sbjct: 477 FRFTLNNRQDFALTS---------LYRWRDIVARAEDESPQFVLPNHMLLSLAETLPRDV 527
Query: 386 TDVYT 390
+Y
Sbjct: 528 GGIYV 532
>gi|196007028|ref|XP_002113380.1| hypothetical protein TRIADDRAFT_27020 [Trichoplax adhaerens]
gi|190583784|gb|EDV23854.1| hypothetical protein TRIADDRAFT_27020, partial [Trichoplax
adhaerens]
Length = 535
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 171/320 (53%), Gaps = 29/320 (9%)
Query: 69 NKEKSSGSHPYELEITAL------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELA 122
N + HPY EI L L++ +P + L L + V E K +L +L
Sbjct: 199 NVDGQESRHPYRYEIKHLQPMDWQLKSKKPM-----MYLPLDETPLNVITE-KDELKDLL 252
Query: 123 NALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGV 182
L FAVD E HS RS+ GF L+QIST DY+VDT+AL E+ L F+DP +
Sbjct: 253 ETLKSVTEFAVDLEHHSYRSYQGFVCLMQISTRDADYIVDTLALRSELWTLNEVFSDPKI 312
Query: 183 CKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQR 242
K+ HG+D+D++WLQRDF IYVVN+FDT +A +L P+ SL+YLL YC V NK LQ
Sbjct: 313 IKILHGADSDIIWLQRDFAIYVVNMFDTGQAARLLQFPRFSLSYLLLKYCNVTANKGLQL 372
Query: 243 EDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSN 302
DWR RPLP EM+QYA+ D HYLLYI L EL N ++ K NF RS
Sbjct: 373 ADWRIRPLPQEMVQYAREDTHYLLYIFDVLTNELM---NASTSVDLLKSNF-----DRSK 424
Query: 303 TVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHD 362
+CL+ Y K + + + LL G + +L +WRD +AR +D
Sbjct: 425 KICLRTYEKPVFN-------KKSYLNLLYKHKG--RFNHQQNYAFAKLYSWRDSVARDND 475
Query: 363 ESLRFVLSDQAIIALANKAP 382
ES FVL + ++ +A P
Sbjct: 476 ESANFVLPNHMLLQIAENLP 495
>gi|170112858|ref|XP_001887630.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637532|gb|EDR01817.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 200/394 (50%), Gaps = 42/394 (10%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSP------------------FK 66
+Q R L+ Q++ +L PKPQ FKR DNS +P +
Sbjct: 144 KQHTSRGYLDPALQHASHL---PKPQVKFKRK-PDNSDAPWYPTISHKFNAKVPLGHVYH 199
Query: 67 HANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRS---DSFVWVETKSQLNELAN 123
+ G+HPY EI+ L P + F + S S +W+ T +L +
Sbjct: 200 DVGSDGVVGNHPYRYEISHL---SYPPYLFKSCTPQQPPSLEETSAIWISTPDELQAMLA 256
Query: 124 ALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVC 183
L K AVD E HS RS+ GF L+QIS + D++VD +AL DEI L F DP +
Sbjct: 257 KLKKATEIAVDLEHHSYRSYTGFLCLMQISDRENDWIVDLLALRDEIEQLNEIFTDPKIV 316
Query: 184 KVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE 243
KV HG+++DV+WLQ+DF++Y+VNLFDT A ++L P+ LA LLE YC +K Q
Sbjct: 317 KVLHGAESDVVWLQQDFNVYIVNLFDTFHASKLLDFPRHGLANLLEMYCDYIPDKRYQLA 376
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL-----KQQGNENSYCPDDKFNFVLEAS 298
DWR RPLP EML YA++D H+LL+I L L + + +S + + +
Sbjct: 377 DWRIRPLPQEMLDYARSDTHFLLFIYDNLRNALLDRSRSRSSSPSSSSQKPQHALLTQVL 436
Query: 299 RRSNTVCLQVYTKEI-----ESYPGEAAASSIFFR---LLNGQGGVSSISSVTQDLVRRL 350
RS L+VY KE S PG + + L+ G GV I ++ +++ R+
Sbjct: 437 TRSAETSLRVYVKEPYDAADGSGPGGWDTLAKKWNKGALMAGGPGV-GIGAMQREVYVRV 495
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
WR+ +AR DES R+ + +Q + LA + PA+
Sbjct: 496 HGWRERVAREEDESTRYTMPNQYLFQLAEQPPAD 529
>gi|224123860|ref|XP_002319182.1| predicted protein [Populus trichocarpa]
gi|222857558|gb|EEE95105.1| predicted protein [Populus trichocarpa]
Length = 858
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 183/354 (51%), Gaps = 48/354 (13%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLEN------PRPEFD 95
P+ +HN +L +NS F H E+S HP E L + ++ P P
Sbjct: 171 PQEEHN---ILVNNSNRAFDHVWLERSEDGLRVIHPLERLSVLDFMDKSTGDVEPAPPLP 227
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
S SF VE L ELA L FAVD E + RSF G T L+QIST
Sbjct: 228 I--------ESTSFKLVEEVKDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTR 279
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED++VDT+ L + L+ F DP KV HG+D DV+WLQRDF IY+ NLFDT +A
Sbjct: 280 TEDFIVDTLKLRIHVGPYLREVFKDPAKRKVMHGADRDVVWLQRDFGIYICNLFDTGQAS 339
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
VL + SL +LL +CGV NK Q DWR RPLP EM++YA+ D HYLL+I + A
Sbjct: 340 RVLKLERNSLEHLLHHFCGVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLHIYDLMRA 399
Query: 275 EL--KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRL 329
L K NEN+ P +LE +RS VC+Q+Y KE+ SY
Sbjct: 400 LLLSKPIDNENADPP------LLEVYKRSYDVCMQLYEKELFTENSY------------- 440
Query: 330 LNGQGGVSSISSVTQ-DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
LN G S+ + Q +V L WRD +AR DES ++L ++ ++ +A + P
Sbjct: 441 LNMYGLPSAGFNAQQLAIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMP 494
>gi|63054485|ref|NP_593004.2| exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|6226742|sp|Q10146.2|RRP6_SCHPO RecName: Full=Exosome complex exonuclease rrp6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|159883898|emb|CAA93168.2| exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)
[Schizosaccharomyces pombe]
Length = 777
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 174/324 (53%), Gaps = 9/324 (2%)
Query: 72 KSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
K+S HPYE EI + P + +D +WV T+SQL+++ L
Sbjct: 181 KNSLPHPYEPEIQNSVYPPWVSEMSNPIDTGSVDETEPIWVSTESQLSDMLKELQNSKEI 240
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
AVD E H RSF GF L+QIS ++D++VDT+ L +E+ L F +P + KVFHG+
Sbjct: 241 AVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREELEALNVVFTNPNIIKVFHGATM 300
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D++WLQRDF +YVVNLFDT A +VL LA+LL+ YC +K Q DWR RPLP
Sbjct: 301 DIIWLQRDFGLYVVNLFDTYYATKVLGFEGHGLAFLLQKYCDYDADKRYQMADWRIRPLP 360
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK 311
EML+YAQ+D HYLLYI L EL + E K N + S + L+ Y
Sbjct: 361 REMLKYAQSDTHYLLYIWDHLRNELISKSAER------KENLMQSVFNSSKQISLRKY-- 412
Query: 312 EIESY-PGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
E+E Y P + + +L G I + R L WRD +AR DES+R+VL
Sbjct: 413 ELEPYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIYRALHDWRDSVARKEDESVRYVLP 472
Query: 371 DQAIIALANKAPANRTDVYTTIAQ 394
++ +IA+A P DV++ Q
Sbjct: 473 NRLLIAIAASKPVEAADVFSISKQ 496
>gi|403344491|gb|EJY71591.1| hypothetical protein OXYTRI_07421 [Oxytricha trifallax]
Length = 967
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 161/282 (57%), Gaps = 14/282 (4%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V+ + +L+E+ LS A+D E H+ RS+ GFT L+QIS DY+VDT+ L
Sbjct: 284 FEFVDDEEKLDEMVKILSGSREIAIDLEHHNHRSYQGFTCLMQISNRTHDYVVDTLKLRQ 343
Query: 169 EIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
+ L P F DP + KV HG+D DV WLQ+DF +YVVN+FDT +A +L KP LA+L
Sbjct: 344 SLGPKLLPLFTDPQITKVLHGADYDVEWLQKDFSLYVVNMFDTGQAARILQKPGFGLAFL 403
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG-NENSYC 286
L++YCGV T+K Q DWRQRP+P EML+YA+ D HYLLY+ + EL Q +N+
Sbjct: 404 LQSYCGVLTDKKYQLADWRQRPIPEEMLKYAREDTHYLLYVYDLMRKELIQNAVKQNASN 463
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
P + VL +SN +C + Y K I ++ ++ + S+ ++ +
Sbjct: 464 PLSMYRQVL---IKSNQLCQKQYEKPI-------VKDYNYYMIVGRNKTIQSMKQIS--V 511
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
++ L RD +AR+ DES ++ + + + + P R +
Sbjct: 512 LKMLVKLRDYIARLEDESSQYAIPNHIMFQMGKDLPTTRNQI 553
>gi|345327688|ref|XP_003431189.1| PREDICTED: exosome component 10 [Ornithorhynchus anatinus]
Length = 864
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 184/343 (53%), Gaps = 34/343 (9%)
Query: 52 NFKRVLADNSYSPFKHANKEKSSG------SHPYELEI------TALLENPRPEFDFSNV 99
N ++ LA +YSP ++ ++ G +HPY+ E+ A+LE P+ + + V
Sbjct: 198 NAQKPLAPGTYSPAGEIDRLQTGGGKNILFAHPYKYELDHFTPPEAVLEKPQVQM-YRPV 256
Query: 100 DLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
+ F + T L EL L FAVD E HS RSFLG T L+QIST ED+
Sbjct: 257 E-----KTPFHLITTVDDLVELNEKLLNLKEFAVDLEHHSYRSFLGLTCLMQISTRTEDF 311
Query: 160 LVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK 219
++DT+ L E+ IL F DP + KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+
Sbjct: 312 IIDTLELRSELYILNESFTDPSIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNL 371
Query: 220 PQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
+ SL YLL+ YC V +K Q DWR RPLP EML YA+ D HYLL++ + +L ++
Sbjct: 372 GRHSLDYLLKHYCNVEADKQYQLADWRIRPLPREMLNYARDDTHYLLFVYDKMRLDLWER 431
Query: 280 GNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
GNE + V + RS +CL+ + K I + + LN Q +
Sbjct: 432 GNEQPV----QLQVVWQ---RSKDICLKRFIKPIFTEESYLELYKKHKKHLNTQQLTA-- 482
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ L +WRD AR DES +VL + ++ +A + P
Sbjct: 483 -------FQLLFSWRDKTARKEDESFGYVLPNHMMLKIAEELP 518
>gi|356571755|ref|XP_003554038.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 643
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 187/353 (52%), Gaps = 21/353 (5%)
Query: 37 PQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPR 91
P+ ++ + KPQ+ + ++ DNS PF+H EKS HP E L + ++
Sbjct: 108 PKVPFHIPTIKKPQYAYN-IVVDNSNEPFEHILLEKSDDGQRYIHPLEKLSVLDFVDKEN 166
Query: 92 PEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQ 151
E + V+ F VE L E+A LS FAVD E + RSF G T L+Q
Sbjct: 167 LE-NLVPVEPPSIECTPFKLVEDVKGLKEVAAMLSSVNEFAVDLEHNHYRSFQGLTCLMQ 225
Query: 152 ISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT 210
IST ED+++DT+ + + + L+ F DP KV HG+D D++WLQRDF IYV N+FDT
Sbjct: 226 ISTRTEDFVIDTLKVRNHVGPYLREVFKDPTKKKVMHGADRDIVWLQRDFGIYVCNMFDT 285
Query: 211 AKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
++ VL + SL YLL+ +CGV NK Q DWR RPLP ML+Y + D HYLLYI
Sbjct: 286 GQSSRVLKLDRYSLQYLLQQFCGVTANKEYQSADWRLRPLPDVMLRYGREDTHYLLYIYD 345
Query: 271 CLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLL 330
+ +L E+ + N +LE +RS VC+Q+Y KE+ S + L
Sbjct: 346 LMRIKLFALSKES----EGSDNPLLEVYKRSYDVCMQLYEKELLK-----EDSYLHIWGL 396
Query: 331 NGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
G G ++ +V L WRD +AR DE +VL ++ I+ +AN+ P
Sbjct: 397 RGAG----FNAQQLAVVSGLWEWRDGLARADDEGPGYVLPNRIILEIANQMPV 445
>gi|388579133|gb|EIM19461.1| hypothetical protein WALSEDRAFT_61456 [Wallemia sebi CBS 633.66]
Length = 789
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 185/356 (51%), Gaps = 40/356 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-------------SHPYELEITAL-------- 86
KPQ + + DNS SP+K K + SHPY+ EI ++
Sbjct: 130 KPQLKWSSSI-DNSDSPWKPLLTHKPNAKADLTWTTVDDRLSHPYQTEIESIKYPAQQLK 188
Query: 87 LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
+ P + DF+ F W++ + LN L + LS A+D E H RS+ GF
Sbjct: 189 TQTPIKQGDFNQT--------PFKWIDNEESLNYLLDRLSTATEIAIDLEHHDFRSYRGF 240
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+QIS ED+++DT+ L D++ L F +P + KVFHG+D+D++WLQRDF +Y+VN
Sbjct: 241 VCLMQISIRGEDFIIDTLELRDQLIKLNDTFTNPAIVKVFHGADSDIVWLQRDFGVYIVN 300
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
+FDT A +VL Q SLA LL +CG +K QR DWR+RPL +ML+YA++D HYLL
Sbjct: 301 MFDTYHATKVLGFSQHSLASLLIKFCGYTPDKRYQRADWRKRPLTNKMLEYARSDTHYLL 360
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
YI L L ++ ++ K + + + +RS V L+ + ++ Y +
Sbjct: 361 YIYDMLRNTLIEKSSK-------KNDMLKDVLQRSEQVSLKTHHRDPYDY-DTGKGFGGW 412
Query: 327 FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ L V + ++ RRL WRD +AR DES+ + S+ + LA K P
Sbjct: 413 YNLATKWNKV--VEPPLLEVFRRLHQWRDQIARKEDESVHVIFSNHQLYDLALKQP 466
>gi|363750290|ref|XP_003645362.1| hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888996|gb|AET38545.1| Hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
Length = 747
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 196/379 (51%), Gaps = 58/379 (15%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HANK---EKSSGS-----------HPYELEIT-- 84
KPQ FK + ++ PFK HA K E SS + HPYE EI
Sbjct: 133 KPQLQFKIPVDNSECHPFKPLLKVKPHALKPLEEVSSLTVETECVPAHYPHPYEYEIDNQ 192
Query: 85 ----ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
++L P + SN D + +WV+ + LN++ N L AVD E H
Sbjct: 193 PYDDSVLTIKEP-IEPSNWD-----ENEPIWVDNITALNDMLNGLKNVKEIAVDLEHHDY 246
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + D+LVDTIAL ++ +L F DP + KVFHG+ D++WLQRD
Sbjct: 247 RSYYGLVCLMQISTRESDWLVDTIALRQDLQVLNEIFTDPSILKVFHGAFMDIIWLQRDL 306
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV+LFDT A L P+ SLAYLLET+ T+K Q DWR RPL M YA+
Sbjct: 307 GLYVVSLFDTYHASRALGFPKHSLAYLLETFANFKTSKKYQLADWRIRPLSKPMKTYARA 366
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L NS +DK + VL ASR V + + E S+ +
Sbjct: 367 DTHFLLNIYDKL---------RNSLIKEDKLSGVLHASR---NVAKRRF--EYTSFRPKV 412
Query: 321 AASSIF--------FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
+ ++F +R L Q V I + L+R+L WRD++AR DES+R+V+ +Q
Sbjct: 413 LSPTVFSPIEKDDPWRTLMSQYNVPDIK---EPLMRKLYKWRDMVARKDDESVRYVMPNQ 469
Query: 373 AIIALANKAPANRTDVYTT 391
+++L AP++ + + T
Sbjct: 470 LLVSLVTLAPSDPSGLLTV 488
>gi|355686789|gb|AER98187.1| exosome component 10 [Mustela putorius furo]
Length = 732
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + +V + +L EL
Sbjct: 126 EQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRPVAETPCH------FVSSLDELVELNEK 179
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 180 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVK 239
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YCGV +NK Q D
Sbjct: 240 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLAD 299
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 300 WRIRPLPEEMLHYARDDTHYLLYIYDKMRLELWERGNEQPV----QLQVVWQ---RSRDI 352
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 353 CLKKFVKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 400
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 401 DESYGYVLPNHMMLKIAEELP 421
>gi|389740502|gb|EIM81693.1| hypothetical protein STEHIDRAFT_171972 [Stereum hirsutum FP-91666
SS1]
Length = 910
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 196/423 (46%), Gaps = 67/423 (15%)
Query: 18 AISILFTRQQRRRRKLNQCP--QYSCYLQSEPKPQHNFKRVLADNS----YSPFKH---- 67
AI++ +R L P Q++ +L PKPQ FKR + + Y +H
Sbjct: 130 AIAVKPPPPVPKRTALAPAPVVQHAAHL---PKPQLKFKRKPVNTNGAVWYPQLRHKYNA 186
Query: 68 ------------ANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETK 115
EK+ HPY EIT + R S + F WV T
Sbjct: 187 QVPLGFNFNPNDPESEKAIPPHPYRHEITNITYPSRMFETQSPITPKSFAETPFTWVSTS 246
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
+ + L AVD E HS R+F GF L+QIS+ +ED++VD L DE+ L
Sbjct: 247 IDFATMLDKLRNAQEIAVDLEYHSYRTFGGFVCLMQISSREEDWIVDPFELRDEMEDLNE 306
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
F DP + K+FHG+++DV WLQ+DF++Y+VNLFDT A +VL P+ LA LLE YC
Sbjct: 307 VFTDPKIVKIFHGAESDVAWLQQDFNLYIVNLFDTFHASKVLDFPRHGLASLLEMYCDFT 366
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL----------------------- 272
+K Q DWR RPLP EML+YA++D H+LLYI L
Sbjct: 367 ADKRYQLADWRVRPLPQEMLEYARSDTHFLLYIYDNLRNALLDRFLSRSQSRAQSPQSSS 426
Query: 273 ----VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE---IESYPGEAAASSI 325
+ + + P +V E RS L+VY +E +E G ++
Sbjct: 427 TPPPPSTINPSSTVTALIPPGPDGYVREVLSRSAETSLRVYEREYYDVEGGSGPGGWDTM 486
Query: 326 FFR------LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
+ + +G GGV +++ R + AWRD AR DES+R+VL++ + LA
Sbjct: 487 AKKWNKVALVADGPGGVQ------REVYRAVHAWRDRTAREEDESVRYVLANHFVFQLAE 540
Query: 380 KAP 382
+ P
Sbjct: 541 RPP 543
>gi|348514838|ref|XP_003444947.1| PREDICTED: exosome component 10 [Oreochromis niloticus]
Length = 892
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 170/313 (54%), Gaps = 28/313 (8%)
Query: 76 SHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEF 129
+HPY+ E+ LL P P+ + L +V+T L L L K
Sbjct: 255 AHPYQYELDHLTIPENLLSKPEPQMYKPVAETKLS------FVDTLEDLVALNEKLCKLS 308
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
FAVD E HS RSFLG T L+QIST ED+++DT+ L E+ IL F DP + KVFHG+
Sbjct: 309 EFAVDLEHHSYRSFLGLTCLMQISTRGEDFIIDTLELRSEMYILNEAFTDPSIVKVFHGA 368
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D+D+ WLQRDF +YVVNLFDT +A L+ + SL +LL+ +C V ++K Q DWR RP
Sbjct: 369 DSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKHFCSVDSDKRYQLADWRVRP 428
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
LP EM+QYA+TD HYLLYI C+ +L + N P + +S ++ L+ Y
Sbjct: 429 LPDEMVQYARTDTHYLLYIYDCVRVQLL---DFNHGQP----GLLQSVWNKSRSISLKKY 481
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
K I Y E+ + L Q + +T R L AWRD +AR DES +VL
Sbjct: 482 VKPI--YTEES-----YLELQRKQKKSFNTQQLT--AFRLLFAWRDKLARQEDESTGYVL 532
Query: 370 SDQAIIALANKAP 382
+I ++ + P
Sbjct: 533 PTHMMIKISEELP 545
>gi|403418903|emb|CCM05603.1| predicted protein [Fibroporia radiculosa]
Length = 751
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 206/424 (48%), Gaps = 57/424 (13%)
Query: 10 AITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYS------ 63
AI + + ++ + + +L+ Q++ L PKPQ F+ + DNSY
Sbjct: 23 AIAVNPIQPVASKAKKSNAPQGRLDPALQHASNL---PKPQLQFRHKV-DNSYHTLWKPT 78
Query: 64 ---------PFKHANKEKSSGS-------HPYELEITALLENPRPEFDFSNVDLDLQRSD 107
P + +E++S HPY EI + P F S +D
Sbjct: 79 LQHKYNAQVPLGYIFREENSEGAPALNVLHPYRYEIKHI-SYPSRMFTQSPPISPRSFAD 137
Query: 108 S-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
+ F WV + + + L AVD E HS R++ GF L+QIST ED++VD +A+
Sbjct: 138 TPFTWVNDSAAFTNMLDKLRSAREIAVDLEHHSYRTYSGFVCLMQISTRDEDWVVDALAV 197
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
DE+ L DP + KV HG+++D++WLQ+DF++Y+VNLFDT A ++L P+ SLA
Sbjct: 198 RDEMEALNEVLTDPAIVKVLHGAESDIIWLQQDFNLYIVNLFDTYHASKILEFPRHSLAT 257
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI----AKCLVAELKQQGNE 282
LLE YC +K Q DWR RPLP EML YA++D H+LL+I L+ + + +
Sbjct: 258 LLEMYCDFTADKRYQLADWRIRPLPEEMLAYARSDTHFLLFIYDNLRNALIDRAQSRPHS 317
Query: 283 NSYCP------------DDKFNFVLEASRRSNTVCLQVYTKEI---ESYPGEAAASSIFF 327
S P + V E RS L+VY KEI +S G ++
Sbjct: 318 RSQSPSAVVTSPSSHPTNQAHALVREVLSRSEDTALRVYEKEIYDADSGAGPGGWDTLAR 377
Query: 328 RLLNG-------QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
+ G +GG +V + + R + AWRD +AR DES R+VL + + LA +
Sbjct: 378 KWNKGVLMAGAPEGGP---YAVQRTIYRGVHAWRDRIAREEDESTRYVLPNHYLFVLAER 434
Query: 381 APAN 384
PA+
Sbjct: 435 PPAD 438
>gi|338722160|ref|XP_003364495.1| PREDICTED: exosome component 10 isoform 2 [Equus caballus]
Length = 861
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 176/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRPVAETPCH------FVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST +ED++VDT+ L ++ IL F DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRREDFIVDTLELRSDMYILNESFTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + RS V
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNDQPV----QLQVVWQ---RSRDV 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|255569470|ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 857
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 181/349 (51%), Gaps = 38/349 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLE----NPRPEFDFSN 98
KPQ + +L +NS PF+H ++S HP E L I ++ N P
Sbjct: 166 KPQEEYN-ILVNNSNQPFEHVWLQRSEDGLRFIHPLEKLSILDFVDKSIGNAEP------ 218
Query: 99 VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
V F V+ L ELA L FAVD E + RSF G T L+QIST ED
Sbjct: 219 VSPPSLECTPFKLVKEVKDLKELAAKLRAVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 278
Query: 159 YLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
+++DT+ L + L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A VL
Sbjct: 279 FIIDTLKLRIHVGPYLREVFKDPTKRKVMHGADRDIIWLQRDFGIYVCNLFDTGQASRVL 338
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
+ SL +LL +CG+ NK Q DWR RPL EML+Y + D HYLLYI + L
Sbjct: 339 KLERNSLEHLLRHFCGITANKEYQNADWRLRPLTDEMLRYGREDTHYLLYIYDLMRIMLL 398
Query: 278 QQGN--ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGG 335
N ENS P + E +RS VC+Q+Y KE+ + E++ I+ G
Sbjct: 399 SMPNETENSNSP------LAEVYKRSYDVCMQLYEKELLT---ESSYLHIY--------G 441
Query: 336 VSSISSVTQDL--VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ + Q L V LC WRD++AR DES F+L ++ ++ +A + P
Sbjct: 442 LQTAGFNAQQLAIVAGLCEWRDVIARTEDESTGFILPNKTLLEIAKQMP 490
>gi|149695529|ref|XP_001492550.1| PREDICTED: exosome component 10 isoform 1 [Equus caballus]
Length = 886
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 176/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRPVAETPCH------FVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST +ED++VDT+ L ++ IL F DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRREDFIVDTLELRSDMYILNESFTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + RS V
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNDQPV----QLQVVWQ---RSRDV 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|301774747|ref|XP_002922792.1| PREDICTED: exosome component 10-like isoform 2 [Ailuropoda
melanoleuca]
Length = 887
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ +L+ P+P+ + V +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDPVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L E+ IL DP + K
Sbjct: 304 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSEMYILNESLTDPSIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + A +RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPVQ-------LQVAWQRSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFAKPIFTDESY----------LELYRKQKRHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|301774745|ref|XP_002922791.1| PREDICTED: exosome component 10-like isoform 1 [Ailuropoda
melanoleuca]
Length = 885
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ +L+ P+P+ + V +V + +L EL
Sbjct: 273 EQDMFAHPYQYELDHFTPPDPVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 326
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L E+ IL DP + K
Sbjct: 327 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSEMYILNESLTDPSIVK 386
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YCGV +NK Q D
Sbjct: 387 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLAD 446
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + A +RS +
Sbjct: 447 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPVQ-------LQVAWQRSRDI 499
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 500 CLKKFAKPIFTDESY----------LELYRKQKRHLNTQQLT--AFQLLFAWRDKTARRE 547
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 548 DESYGYVLPNHMMLKIAEELP 568
>gi|354502292|ref|XP_003513221.1| PREDICTED: exosome component 10 isoform 2 [Cricetulus griseus]
Length = 860
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 176/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ +V T QL EL
Sbjct: 250 EQDMFAHPYQYELDHFTLPDSVLQKPQPQL-YRPVE-----ETPCHFVSTLDQLVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFILDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q ++S + L AWRD AR
Sbjct: 477 CLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLAAFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|281349256|gb|EFB24840.1| hypothetical protein PANDA_011805 [Ailuropoda melanoleuca]
Length = 834
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ +L+ P+P+ + V +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDPVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L E+ IL DP + K
Sbjct: 304 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSEMYILNESLTDPSIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + A +RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPVQ-------LQVAWQRSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFAKPIFTDESY----------LELYRKQKRHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|348571395|ref|XP_003471481.1| PREDICTED: exosome component 10-like isoform 2 [Cavia porcellus]
Length = 860
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 177/321 (55%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPSESVLQKPQPQL-YRPVE-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L + FAVD E HS RSFLG T L+QIST ED+LVDT+ L E+ IL +P + K
Sbjct: 304 LLRCEEFAVDLEHHSYRSFLGLTCLMQISTRTEDFLVDTLELRSEMYILNESLTNPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLRLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + +L ++GNE + V + RS +
Sbjct: 424 WRVRPLPEEMLSYARDDTHYLLYIYDKMRLDLWERGNEQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q ++S + L AWRD AR
Sbjct: 477 CLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|348571393|ref|XP_003471480.1| PREDICTED: exosome component 10-like isoform 1 [Cavia porcellus]
Length = 885
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 177/321 (55%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPSESVLQKPQPQL-YRPVE-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L + FAVD E HS RSFLG T L+QIST ED+LVDT+ L E+ IL +P + K
Sbjct: 304 LLRCEEFAVDLEHHSYRSFLGLTCLMQISTRTEDFLVDTLELRSEMYILNESLTNPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLRLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + +L ++GNE + V + RS +
Sbjct: 424 WRVRPLPEEMLSYARDDTHYLLYIYDKMRLDLWERGNEQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q ++S + L AWRD AR
Sbjct: 477 CLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|443695610|gb|ELT96477.1| hypothetical protein CAPTEDRAFT_99256, partial [Capitella teleta]
Length = 627
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 176/362 (48%), Gaps = 47/362 (12%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG------------------------SHPYELEI 83
+PQ FK + DN+ PF KEK + HPY+ E+
Sbjct: 148 RPQGKFKDKI-DNTNRPFIPIIKEKPNAMKSLEASRWVLFPLSNLISLRFSYPHPYQYEL 206
Query: 84 TALLENPRPEFDFSNVD--LDLQRSDSFV-WVETKSQLNELANALSKEFFFAVDTEQHSL 140
P PE V+ L D+ + V+T+ L +L LS+ AVD E HS
Sbjct: 207 DHF--EPTPE-QLKKVEPQTPLPIDDTPISMVDTEEDLRDLCAMLSQVKEIAVDVEHHSY 263
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RSFLG T L+QIST D+LVD +AL + + +L F DPG+ KVFHG++ D+ WLQRD
Sbjct: 264 RSFLGLTCLLQISTRTHDFLVDALALREHLHLLNNVFTDPGIVKVFHGAEQDIHWLQRDL 323
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVVN+FDT A + L P+ SLA+LL TYC V +K Q DWR RPLP +++ YA+
Sbjct: 324 GVYVVNMFDTFHAAKALGLPRLSLAHLLTTYCSVKPDKKFQMADWRIRPLPEQLVHYARE 383
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D HYLLY+ L +L GNE + N + S VC Y K I S
Sbjct: 384 DTHYLLYVHDLLKNQLLDAGNEAA-------NLLCSVLDSSTGVCKARYVKPILSSDSHL 436
Query: 321 AASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
+ N Q ++ + AWRD RV DES +VL + ++ +A
Sbjct: 437 VIMKKARKWFNSQ---------QMQALKEMYAWRDGCGRVDDESTGYVLPNHMMLNIAEN 487
Query: 381 AP 382
P
Sbjct: 488 LP 489
>gi|321465482|gb|EFX76483.1| hypothetical protein DAPPUDRAFT_226045 [Daphnia pulex]
Length = 544
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 188/376 (50%), Gaps = 65/376 (17%)
Query: 43 LQSEPKPQHNFKRVLADNSYSPFKHANKEK----------SSGSHPYELEITALLENPRP 92
L+ +PKPQ NFK + ++S PF+H KEK HPYE E+ P
Sbjct: 21 LEEKPKPQLNFKEKITNDS-KPFRHKLKEKPHCLNPLSMEQRDRHPYEFELKKF----SP 75
Query: 93 EFDFSNVDLDLQR-----SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
+ F + ++ S + V+T L L + VD E HS RS+ G T
Sbjct: 76 DSTFLKIKHEVPHFQPVSSTPLIMVDTTEAFEHLLRDLLSQTVIGVDLEHHSDRSYRGIT 135
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST+K DY++DT+ L D + L F DP + K+F G+D+DV+WLQRDF IYVVNL
Sbjct: 136 CLMQISTDKTDYIIDTLQLWDHLQPLNKVFCDPNIVKIFQGADSDVIWLQRDFGIYVVNL 195
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT +A +L +K L +LL+ YC V NK Q DWR RPLP EM++YA+ D HYL+Y
Sbjct: 196 FDTLQAASLLGFQKKGLYFLLQHYCQVHVNKKYQLADWRIRPLPQEMVKYAREDTHYLIY 255
Query: 268 IAK----------CL-----VAELKQQGNENSYCPDDK----------------FNFVLE 296
I + CL E+K+ E P D+ N VL+
Sbjct: 256 IYERMKQDLYSRHCLGDVKITPEMKKGTPEE---PKDRKSKSKSSQITPVNEKGVNQVLQ 312
Query: 297 ASRRSNTVCLQVYTKEI--ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWR 354
S +VCL+ Y + E Y S F+ LN +G ++ ++ + +WR
Sbjct: 313 VWNNSRSVCLKQYRIQTLEEMY-------SKFYSSLNKEG--KKFNNQQSYALQEIFSWR 363
Query: 355 DLMARVHDESLRFVLS 370
D +AR DES +V++
Sbjct: 364 DRVARELDESPHYVMT 379
>gi|354502290|ref|XP_003513220.1| PREDICTED: exosome component 10 isoform 1 [Cricetulus griseus]
Length = 885
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 176/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ +V T QL EL
Sbjct: 250 EQDMFAHPYQYELDHFTLPDSVLQKPQPQL-YRPVE-----ETPCHFVSTLDQLVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFILDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q ++S + L AWRD AR
Sbjct: 477 CLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLAAFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|351713711|gb|EHB16630.1| Exosome component 10 [Heterocephalus glaber]
Length = 882
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 175/322 (54%), Gaps = 36/322 (11%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPASVLQKPQPQLHRPVEETPCH------FVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL +P + K
Sbjct: 304 LLNCEEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTNPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL YLL YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDYLLRLYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEAS-RRSNT 303
WR RPLP EML YA+ D HYLLYI + EL ++GNE L+A +RS
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNEQPT--------QLQAVWQRSRD 475
Query: 304 VCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARV 360
+CL+ + K I ESY L Q ++S + L +WRD AR
Sbjct: 476 ICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFSWRDKTARR 523
Query: 361 HDESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 524 EDESFGYVLPNHMMLKIAEELP 545
>gi|426239736|ref|XP_004013775.1| PREDICTED: exosome component 10 isoform 2 [Ovis aries]
Length = 862
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + +V T +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPIGETPCH------FVSTLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L K FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ +L DP + K
Sbjct: 304 LLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYVLNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNEQP----TQLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|426239734|ref|XP_004013774.1| PREDICTED: exosome component 10 isoform 1 [Ovis aries]
Length = 887
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + +V T +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPIGETPCH------FVSTLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L K FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ +L DP + K
Sbjct: 304 LLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYVLNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNEQP----TQLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|210147550|ref|NP_957383.2| exosome component 10 [Danio rerio]
Length = 899
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 173/314 (55%), Gaps = 30/314 (9%)
Query: 76 SHPYELEITALL--ENPR--PEFD-FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
SHPY+ E+ L+ EN + PE + +D ++ T L L L+K
Sbjct: 253 SHPYQYELDHLVMPENLKCKPEVQMYKPID-----ETPCQFISTLEDLVALNEKLAKTTE 307
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVD E HS RSFLG T L+QIST +ED+++DT+ L E+ IL F DP + KVFHG+D
Sbjct: 308 FAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNETFTDPAIVKVFHGAD 367
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQ+DF +YVVN+FDT A L+ + SL +LL+ YC V+++K Q DWR RPL
Sbjct: 368 SDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLDHLLKVYCDVSSDKRYQLADWRIRPL 427
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EML+YAQ D HYLLY+ + A+L GN + + + +S + L+ Y
Sbjct: 428 PDEMLKYAQADTHYLLYVYDRVRADLFDGGNGQA-------TLIQQVWTKSRDLSLKKYV 480
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV--RRLCAWRDLMARVHDESLRFV 368
K I + L Q S TQ L R + AWRD +AR DES ++
Sbjct: 481 KPI-------FTEDSYMELYRKQKK----SFNTQQLAAFRLMYAWRDKLAREEDESTGYI 529
Query: 369 LSDQAIIALANKAP 382
L + ++ +A++ P
Sbjct: 530 LPNHMMMKIADELP 543
>gi|432864718|ref|XP_004070425.1| PREDICTED: exosome component 10-like [Oryzias latipes]
Length = 890
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 167/313 (53%), Gaps = 28/313 (8%)
Query: 76 SHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEF 129
SHPY+ E+ +LL P P+ + L DS +E +LNE LS+
Sbjct: 255 SHPYQYELDHLTVPDSLLSKPEPQMYKPIAETKLSFIDS---LEDLVELNEKLCKLSE-- 309
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
FAVD E HS RSFLG T L+QIST ED+++DT+ L E+ IL F DP + KVFHG+
Sbjct: 310 -FAVDLEHHSYRSFLGLTCLMQISTRDEDFIIDTLELRSEMYILNEAFTDPTIVKVFHGA 368
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D+D+ WLQRDF +YVVNLFDT + L + SL +LL +C V ++K Q DWR RP
Sbjct: 369 DSDIEWLQRDFGLYVVNLFDTHQGSRALHLARNSLDHLLRHFCNVDSDKRYQLADWRIRP 428
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
LP EM+QYA+TD HYLLYI C+ A+L + N P + +S + L Y
Sbjct: 429 LPDEMVQYARTDTHYLLYIYDCVRAQLL---DSNHGQP----GLLQSVWNKSKDISLTKY 481
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
K + + +L Q + +T R L AWRD +AR DES + L
Sbjct: 482 MKPV-------FTEDSYLEVLRKQKRSFNTQQLT--AFRLLFAWRDKLARQEDESTGYTL 532
Query: 370 SDQAIIALANKAP 382
+I ++ + P
Sbjct: 533 PIHMMIKISEELP 545
>gi|344283517|ref|XP_003413518.1| PREDICTED: exosome component 10 isoform 1 [Loxodonta africana]
Length = 887
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 177/321 (55%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ ++ + +L EL
Sbjct: 250 EQDMFAHPYQHELDHFTPPDSVLQKPQPQL-YRPVE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 304 LLNCKEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKHYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPDEMLHYARDDTHYLLYIYDKMRLELWERGNEQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L +WRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFSWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|156121019|ref|NP_001095656.1| exosome component 10 [Bos taurus]
gi|154757487|gb|AAI51675.1| EXOSC10 protein [Bos taurus]
gi|296479174|tpg|DAA21289.1| TPA: exosome component 10 [Bos taurus]
Length = 702
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + V +V T +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPEPQL-YRPVG-----ETPCHFVSTLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L K FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNEQP----TQLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLTA--FQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|414871321|tpg|DAA49878.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 532
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 180/338 (53%), Gaps = 25/338 (7%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFDF 96
++++ P+PQ + ++ DNS PF+H ++S HP E L + ++ P D
Sbjct: 194 HIRTIPRPQDVYC-IVVDNSSKPFEHILLDRSEDGTRVVHPLEKLPVEQIISRNVP--DN 250
Query: 97 SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK 156
V + F +VE L LA L FAVD E + RSF G T L+QIST
Sbjct: 251 EPVKPPALDNTPFTFVEDLKTLEVLATKLKDATEFAVDLEHNHYRSFQGLTCLMQISTRT 310
Query: 157 EDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACE 215
ED++VDT+ L + L+ FF DP KV HG+ D++WLQRDF IYV NLFDT +A +
Sbjct: 311 EDFIVDTLKLRKYLGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNLFDTGQASK 370
Query: 216 VLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAE 275
VL + SL +LL +CGVA NK Q DWR RPLP EM++YA+ D HYLLYI +
Sbjct: 371 VLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDLMRLR 430
Query: 276 LKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGG 335
L S C +D +LE +RSN +CLQ+Y KE + S + L
Sbjct: 431 LVN----GSSCEND---LLLEVCKRSNEICLQLYEKEQLT-----DTSYLHIHGLKENEL 478
Query: 336 VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQA 373
++ SV L R WRD +AR DES ++L ++
Sbjct: 479 NATQLSVLSSLYR----WRDGIARAEDESTGYILPNKT 512
>gi|20071218|gb|AAH27326.1| Exosome component 10 [Mus musculus]
Length = 887
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|307177174|gb|EFN66407.1| Exosome component 10 [Camponotus floridanus]
Length = 1189
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 179/353 (50%), Gaps = 36/353 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-----------------SHPYELEITALLENP 90
+PQ FK + DNS P+ KEK + +HPYE E+ + P
Sbjct: 156 RPQLMFKDKI-DNSSKPWMPRIKEKPNSLKPLALYVEEGEHGEVFNHPYEFELDKF-DTP 213
Query: 91 RPEFDFS-NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
+ S V S F +E S++ L L + AVD E HS R+F G T L
Sbjct: 214 ECQLKKSVPVQYKSLESTEFKLIEKPSEIKILLEDLKNQKEIAVDLEHHSYRTFQGITCL 273
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
+QIST DYL+DT+AL E+ L F P + K+FHG+D D++WLQRD +YVVN+FD
Sbjct: 274 MQISTVNTDYLIDTLALRSELHQLNEIFTKPTILKIFHGADMDILWLQRDLSLYVVNMFD 333
Query: 210 TAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIA 269
T +A + L+ P SLAYLL YCG+ NK Q DWR RPLP E+++YA+ D HYLL+I
Sbjct: 334 THQAAKQLNLPYLSLAYLLNKYCGINPNKHFQLADWRIRPLPEELMKYAREDTHYLLHIK 393
Query: 270 KCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRL 329
L EL + N K N + R +C + Y K I + E + +++
Sbjct: 394 DMLKNELIETAN-------GKSNILKAVYDRCTDLCKRTYVKSIWT---EESCMNMY--- 440
Query: 330 LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ S ++ + L WRD+ AR D+S+ +VL + ++ +A P
Sbjct: 441 ---RKSQKSFNNKQMYALLELHKWRDITAREEDDSIGYVLPNHMLLNIAETLP 490
>gi|332024515|gb|EGI64713.1| Exosome component 10 [Acromyrmex echinatior]
Length = 885
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 172/332 (51%), Gaps = 31/332 (9%)
Query: 60 NSYSPFKHANKEKSSG---SHPYELEITAL------LENPRPEFDFSNVDLDLQRSDSFV 110
NS P +E G +HPYE E+ L+ P V+ L +FV
Sbjct: 212 NSLKPLALHVEEDEHGEVFNHPYEFELDKFETLECQLKKRIP------VEYKLLDDTNFV 265
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+++ + +N L L AVD E HS R+F G T L+QIST + DYL+DT++L E+
Sbjct: 266 FIDKPADINILLEDLRNHKEIAVDLEHHSYRTFQGITCLMQISTIQTDYLIDTLSLRSEL 325
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
L F P + KVFHG+D D++WLQRD +YVVN+FDT +A + L+ P SLAYLL
Sbjct: 326 YQLNEIFTKPSILKVFHGADMDILWLQRDLSLYVVNMFDTHQAAKQLNLPYLSLAYLLNK 385
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
YCG+ NK Q DWR RPLP E+++YA+ D HYLLY+ L EL N S
Sbjct: 386 YCGIDPNKHFQLADWRIRPLPLELMKYAREDTHYLLYVKDMLKNELIDAANGKS------ 439
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
N + +S +C + Y K I + E+ + +R I ++ + L
Sbjct: 440 -NILKAVYDQSTEICKRTYVKPI--WTEESCMN--MYRKSQKSFNNKQIYALLE-----L 489
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
WRDL AR D+S+ ++L + ++ +A P
Sbjct: 490 HRWRDLTARQEDDSIGYILPNHMLLNIAETLP 521
>gi|148682876|gb|EDL14823.1| exosome component 10, isoform CRA_b [Mus musculus]
Length = 864
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 252 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 301
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 302 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 361
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 362 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 421
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 422 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 474
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 475 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 522
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 523 ARREDESYGYVLPNHMMLKIAEELP 547
>gi|344283519|ref|XP_003413519.1| PREDICTED: exosome component 10 isoform 2 [Loxodonta africana]
Length = 862
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 177/321 (55%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ ++ + +L EL
Sbjct: 250 EQDMFAHPYQHELDHFTPPDSVLQKPQPQL-YRPVE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 304 LLNCKEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YCGV +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKHYCGVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPDEMLHYARDDTHYLLYIYDKMRLELWERGNEQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L +WRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFSWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|6018165|gb|AAF01779.1|AF091392_1 P100 polymyositis-scleroderma overlap syndrome associated
autoantigen homolog [Mus musculus]
gi|74184429|dbj|BAE25741.1| unnamed protein product [Mus musculus]
gi|148682877|gb|EDL14824.1| exosome component 10, isoform CRA_c [Mus musculus]
Length = 887
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|227116266|ref|NP_057908.2| exosome component 10 [Mus musculus]
gi|341940669|sp|P56960.2|EXOSX_MOUSE RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2 homolog; AltName: Full=Polymyositis/scleroderma
autoantigen 2 homolog
Length = 887
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|20381286|gb|AAH27840.1| Exosc10 protein [Mus musculus]
Length = 862
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|148682875|gb|EDL14822.1| exosome component 10, isoform CRA_a [Mus musculus]
Length = 916
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 253 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 302
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 303 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 362
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 363 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 422
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 423 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 475
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 476 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 523
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 524 ARREDESYGYVLPNHMMLKIAEELP 548
>gi|198424231|ref|XP_002122101.1| PREDICTED: similar to exosome component 10 [Ciona intestinalis]
Length = 669
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 170/318 (53%), Gaps = 27/318 (8%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPY+ E+ ++ LE P P VD +DS ++V+ + LN L L +E
Sbjct: 85 HPYQYELENFKPLSSQLEKPTP-IKSGPVD-----TDSCIFVDGVNGLNMLIRELKQESE 138
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E HS RS+ G T L+Q+ST K DY+VDT+AL ++IL F +P + KVFHG+D
Sbjct: 139 IAVDLEAHSFRSYQGITCLMQLSTRKTDYIVDTLALRANLNILNQVFTNPKIVKVFHGAD 198
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ WLQRDF +YVVNLFDT +A VL S YLL+ YC V ++K Q+ DWR+RPL
Sbjct: 199 QDIKWLQRDFGVYVVNLFDTGQAARVLELGL-SREYLLKHYCKVESDKKYQKADWRERPL 257
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
+ML+YAQ D HYLLYI + +L ++ + + S +CL Y
Sbjct: 258 SKDMLKYAQEDTHYLLYIYDMMKLDLLEKAG--------GVGLMHKVIGNSRDICLLKYE 309
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K I +S L G G + + +R + WRD +AR DES +++
Sbjct: 310 KLI------IDDTSHLKLLRKGAGKIEDWEPQELEALRLIYMWRDELARQKDESCGYIMP 363
Query: 371 DQAIIALANKAPANRTDV 388
++ ++ +A P DV
Sbjct: 364 NKMLVQIAKTLPQTVQDV 381
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT +A L K SL YLL+ YC V ++K Q+ DWR+RPL +ML+YAQ D HYLL
Sbjct: 430 LFDTGQAAREL-KLGCSLEYLLKHYCKVESDKKFQKADWRERPLSKDMLKYAQKDTHYLL 488
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
YI + +L ++ + + + S +CL Y K I +S
Sbjct: 489 YIYDMMKLDLLEKAGDAK--------LMRKVIGNSRDICLLKYEKLI------IDDTSHR 534
Query: 327 FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT 386
L G G + + +R + WRD +AR DES +VL ++ ++ +A P
Sbjct: 535 KLLRKGAGKIEDWEPQELEALRLIYMWRDKLARQMDESCGYVLPNKLLVQIAKTMPQTEQ 594
Query: 387 DV 388
D+
Sbjct: 595 DL 596
>gi|356514085|ref|XP_003525737.1| PREDICTED: LOW QUALITY PROTEIN: exosome component 10-like [Glycine
max]
Length = 429
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 183/357 (51%), Gaps = 41/357 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFSNVDLDL 103
KPQH + + DN+ PF H + S G HP E + T + S VD D+
Sbjct: 10 KPQHEYN-IFVDNTNLPFNHVXLKWSHGEKRFIHPLE-KXTVM----------SFVDTDV 57
Query: 104 Q----------RSDSFVWVETKSQLNELA-NALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
S F VET L + L FAVD E + R+F G T L+QI
Sbjct: 58 GDVVPAKPPPIESTPFKLVETVQDLKAPPLSMLHSADEFAVDLEHNQYRTFQGLTCLMQI 117
Query: 153 STEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTA 211
ST ED++VDT+ LH I L+ F D KV HG+DNDVMWLQRDF IY+ NLFDT
Sbjct: 118 STRTEDFIVDTLKLHSSIGPYLREVFKDLSNRKVMHGADNDVMWLQRDFGIYICNLFDTH 177
Query: 212 KACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKC 271
+A +VL ++SL YLL +C + NK Q DWR RPLP EM++YA+ D HYLLYI
Sbjct: 178 QASKVLKLERRSLKYLLCHFCDITANKEYQSADWRLRPLPYEMVRYAREDTHYLLYIYDL 237
Query: 272 LVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLN 331
+ EL NE P+ ++E + S VC+++Y K + F R+
Sbjct: 238 MRIELFSMLNE----PESVDAPLVEVYKCSYKVCMRLYEKXL-------LTEKSFLRIYG 286
Query: 332 GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
QG + + +V L WRD +ARV D+S +VL +++I+ +A + P ++
Sbjct: 287 LQGAGFTAQQLV--IVSGLFKWRDFVARVKDDSTGYVLPNKSILEIAKQMPVTANNL 341
>gi|339252698|ref|XP_003371572.1| exosome component 10 [Trichinella spiralis]
gi|316968157|gb|EFV52483.1| exosome component 10 [Trichinella spiralis]
Length = 827
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 186/365 (50%), Gaps = 59/365 (16%)
Query: 47 PKPQHNFKRVLADNSYSPFK---------------------HANKE----KSSGSHPYEL 81
PKPQ F+ + DNS +PFK HA+ S +HPY
Sbjct: 176 PKPQLKFRDQI-DNSLNPFKSKLRIKHHEISPEKLSSGLQQHADNAGMEYSSEPAHPYYY 234
Query: 82 EITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLR 141
EI N ++ L ++ + +L+ L N L+ + FAVD E +S R
Sbjct: 235 EIITCEPN--------SLMLSIKEPQHPIMPLNACKLS-LVNDLNSQQAFAVDLEHNSYR 285
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
S+ G T L+QIST DY+VD + E+ IL F DP + KV HGS D+ WLQRDF
Sbjct: 286 SYYGLTCLLQISTRDTDYIVDPFPIWHEMYILNEPFVDPNIVKVMHGSSQDIQWLQRDFG 345
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
IYVVNLFDT A EVL PQ+SL +L++ GV +K Q DWR RPL ++ML YA++D
Sbjct: 346 IYVVNLFDTYHAMEVLEMPQRSLKFLVKELVGVNLDKSYQTADWRIRPLGSKMLAYARSD 405
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGE-- 319
+HYLLY L +L +GNE +D VL +RS+ CLQVY K+ +P E
Sbjct: 406 SHYLLYCWDVLRNQLLNRGNEY----NDLMMIVL---KRSSDTCLQVYKKK---FPNEFE 455
Query: 320 --AAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIAL 377
S F L N Q +R L WRD +AR+ DES+ +++ ++ + L
Sbjct: 456 LRKLESKFPFNLDNRQKYA----------LRMLYYWRDGVARITDESVYYIMRNETLRNL 505
Query: 378 ANKAP 382
A K P
Sbjct: 506 AAKLP 510
>gi|392340772|ref|XP_003754165.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
gi|392348530|ref|XP_003750137.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
Length = 860
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R S L+EL
Sbjct: 250 EQDVFAHPYQYELDHFTPPPSVLQRPQPQ---------LYRPVEETPCHVVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + R
Sbjct: 420 QLADWRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|392340770|ref|XP_003754164.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|392348528|ref|XP_003750136.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|149024626|gb|EDL81123.1| rCG30986, isoform CRA_a [Rattus norvegicus]
Length = 885
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R S L+EL
Sbjct: 250 EQDVFAHPYQYELDHFTPPPSVLQRPQPQ---------LYRPVEETPCHVVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + R
Sbjct: 420 QLADWRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|308473314|ref|XP_003098882.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
gi|308268021|gb|EFP11974.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
Length = 860
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 202/415 (48%), Gaps = 60/415 (14%)
Query: 4 KAKIKIAITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYS 63
+A+I A+ S ++L + + RR + Q + KPQ + ++ADNS +
Sbjct: 145 EAEISEAMKTFSANIGTVLAAKFRERREEAAQMIVHE-------KPQKTY-NIIADNSVA 196
Query: 64 PF---KHANKEKSSG-----------------------SHPYELEITALLENPRPEFDFS 97
PF KH EK SG HPY I +L PE
Sbjct: 197 PFVSVKHHAIEKRSGIVVVDDDESGRIGWTNAEAETEEEHPY---IAEILNFKVPESQLE 253
Query: 98 NVD---LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIST 154
+ + + ++ V+TK +L L + L+ F+VD E H +R++LG T LIQIST
Sbjct: 254 SAEPKKFNALKNTQLTMVDTKEKLEALKDTLNSVTEFSVDLEHHEMRTYLGLTCLIQIST 313
Query: 155 EKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED+++D + D I IL F +P + KVFHG+DNDV+WLQRDF I++VNLFDT A
Sbjct: 314 RDEDFIIDPFPMWDCIGILNEPFTNPKILKVFHGADNDVLWLQRDFGIHIVNLFDTYVAM 373
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+ L P+ SLAYL + V +K Q DWR RPL M+ YA+ D HYLLY L
Sbjct: 374 KKLKYPKFSLAYLAFRFADVILDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLRE 433
Query: 275 ELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG 334
+L +Q ++ N V N +C++VY K + G + F
Sbjct: 434 QLLKQDKKD-------LNVVYS---ECNDLCVRVYKKPVFKPKGYLTDLKLRF------- 476
Query: 335 GVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
+ +S + L WRD++AR DES +FVL + ++ALA + P + +Y
Sbjct: 477 ---TFNSRQDHALTSLYKWRDVVARQEDESPQFVLPNHMLLALAEQLPRDVGGIY 528
>gi|6018181|gb|AAF01781.1| P100 polymyositis-scleroderma overlap syndrome associated
autoantigen homolog [Mus musculus]
Length = 831
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 473 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 520
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 521 ARREDESYGYVLPNHMMLKIAEELP 545
>gi|12856957|dbj|BAB30844.1| unnamed protein product [Mus musculus]
Length = 705
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 227 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 276
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 277 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 336
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 337 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 396
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 397 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 449
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q ++S + L AWRD
Sbjct: 450 SRDICLKKFVKPIFTDESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKT 497
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 498 ARREDESYGYVLPNHMMLKIAEELP 522
>gi|321468927|gb|EFX79910.1| hypothetical protein DAPPUDRAFT_304334 [Daphnia pulex]
Length = 834
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 167/312 (53%), Gaps = 26/312 (8%)
Query: 76 SHPYELEITALLENPRPEFDFSNVD----LDLQRSDSFVWVETKSQLNELANALSKEFFF 131
SHPYE E+ P P+F F+ +D + V ++T+ L L L +E
Sbjct: 199 SHPYEFELERF--TPDPKF-FTVLDEVPPFPSVQEIPLVMIDTEQGLKSLLKDLLEETVI 255
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
AVD E HS RSF G T L+QIST DY++DT+ L D++ L F +P + K+FHG+D
Sbjct: 256 AVDLEAHSYRSFQGLTCLMQISTSSSDYIIDTLELWDQLQPLNEVFCNPKIVKIFHGADM 315
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ WLQRDF IYVVNLFDT A ++L Q SL++LL YC V +K Q DWR RPLP
Sbjct: 316 DIQWLQRDFGIYVVNLFDTYHAAKLLGFAQLSLSFLLRHYCQVIADKQYQLADWRIRPLP 375
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK 311
+M+ YA+ D HYL YI + + +LK +G + N + + S VCL+ Y
Sbjct: 376 EQMVNYAREDTHYLGYIYEKMKKDLKMKGTGD--------NLLTAVWQNSRLVCLKRY-- 425
Query: 312 EIESYPGEAAASSI-FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
P A S + +RL + + ++ L AWRD +AR DES FVL
Sbjct: 426 ---RIPPITAESHLELYRLSKKIFNERQLFA-----LKELFAWRDRIAREEDESTGFVLP 477
Query: 371 DQAIIALANKAP 382
++ +A+ P
Sbjct: 478 KHMLLQIADVLP 489
>gi|345478840|ref|XP_001599044.2| PREDICTED: exosome component 10 [Nasonia vitripennis]
Length = 1163
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 160/312 (51%), Gaps = 28/312 (8%)
Query: 77 HPYELEITAL------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE E+ L RP +D L + +E L L L K
Sbjct: 604 HPYEFELDKFQPPEKQLVKKRPTKYKPVLDTPL------IVIEKVQDLKILLEDLEKYNE 657
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E HS RSF G T L+QIST+ DYL+DT+ L E+ +L F P + KVFHG+D
Sbjct: 658 IAVDLEHHSYRSFQGITCLMQISTKDTDYLIDTLTLRSELHVLNEIFTKPSILKVFHGAD 717
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D++WLQRD +Y+VN+FDT +A + L P SL+YLL+T+C ++ NK Q DWR RPL
Sbjct: 718 SDILWLQRDLGLYIVNMFDTYQAAKQLGLPFLSLSYLLKTHCEISANKHFQLADWRIRPL 777
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P E+++YA+ D HYLLYI L L N S N + RS +C Q YT
Sbjct: 778 PEELMKYAREDTHYLLYIKDILSNALIDSANGQS-------NILKAVYTRSTDICKQTYT 830
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K + + A ++ N + + ++ L WRD AR D+S +VL
Sbjct: 831 KPVWTENSYKAMYRKSQKMFNNRQLFA---------LQELHKWRDETARAEDDSTNYVLP 881
Query: 371 DQAIIALANKAP 382
+ ++ +A P
Sbjct: 882 NHMLLNIAETLP 893
>gi|444728183|gb|ELW68647.1| Serine/threonine-protein kinase mTOR [Tupaia chinensis]
Length = 3780
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 210/416 (50%), Gaps = 55/416 (13%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + V+ +V + +L EL
Sbjct: 2939 EQDMFAHPYQYELDHFIPPDSVLQRPHPQI-YRPVE-----ETPCHFVSSLDELVELNEK 2992
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL F DP + K
Sbjct: 2993 LLSCREFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESFTDPAIVK 3052
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 3053 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 3112
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++G + V + RS +
Sbjct: 3113 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGGNQPV----QLQVVWQ---RSRDI 3165
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ + K I + E+ + L Q + +T + L AWRD AR DES
Sbjct: 3166 CLKKFLKPI--FTDES-----YLELYRKQKKHLNTQQLTA--FQLLFAWRDKTARREDES 3216
Query: 365 LRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVER 424
+VL + ++ +A + P + + C N P P P+V ++++
Sbjct: 3217 YGYVLPNHMMLKIAEELPKEPQGI----------IACCN-----PVP-PLVRQQINEMHL 3260
Query: 425 QVCNNVE-----NLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKF 475
+ E L++IL P+ CP V+PA + ++ Q++ F
Sbjct: 3261 LIQQAREMPLLKRLENILFGPHDCSHAPSDGCP------VIPASGSVPVQKQTSLF 3310
>gi|328767973|gb|EGF78021.1| hypothetical protein BATDEDRAFT_27210 [Batrachochytrium
dendrobatidis JAM81]
Length = 826
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 163/311 (52%), Gaps = 16/311 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRS---DSFVWVETKSQLNELANALSKEFFFAV 133
HPY EI + P F ++ RS W++T +L L + L FAV
Sbjct: 216 HPYRSEIETI---QYPVVYFKQHPEEIYRSLESTPLTWIDTPDKLETLCSILEGVTEFAV 272
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDV 193
D E H RS+ GFT L+QIST ED+LVDT+ L + + L FA+P + KVFHG++ D+
Sbjct: 273 DLEHHDFRSYQGFTCLMQISTRTEDFLVDTLILRNSLHALNTSFANPQIVKVFHGAEMDI 332
Query: 194 MWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAE 253
WLQRDF +YVV+LFDT A L SLA+LL+ YC V T+K Q DWR RPLP E
Sbjct: 333 QWLQRDFGVYVVDLFDTYHASHALELEGHSLAFLLKYYCDVVTDKRYQLADWRIRPLPKE 392
Query: 254 MLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI 313
M+ YA+ D HYLLYI + EL + N ++ N + RS L Y K
Sbjct: 393 MVHYARMDTHYLLYIFDRMRNELLNKSNPETH------NLMHVTLERSGLTSLNTYQK-- 444
Query: 314 ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQA 373
Y + + + + LLN S + + + + WRD +AR DESLRFVL +
Sbjct: 445 APYCKDGLSPNGWRSLLNRLK--ISFNEENLAVFKAIHEWRDRIARKEDESLRFVLPNHM 502
Query: 374 IIALANKAPAN 384
+ L+ P +
Sbjct: 503 LQTLSRVMPTD 513
>gi|449268441|gb|EMC79305.1| Exosome component 10, partial [Columba livia]
Length = 829
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 174/318 (54%), Gaps = 28/318 (8%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ +L+ P P+ + + + +V T +L EL
Sbjct: 215 EQDMFAHPYQYELEHFSPPDGVLKKPEPQM-YRPI-----KETPCHFVTTLDELVELNEK 268
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FA+D E HS RSFLG T L+QIST ED+++DT+ L +++IL F DP + K
Sbjct: 269 LMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMNILNETFTDPAIVK 328
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
V HG+D+DV WLQ+DF +Y+VN+FDT +A +L+ + SL +LL+ YC + +K Q D
Sbjct: 329 VLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGRHSLDHLLKLYCNIDADKQYQLAD 388
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EM+QYA+ D HYLLYI + L ++GNE + V + RS +
Sbjct: 389 WRIRPLPEEMIQYARDDTHYLLYIYDKVREALWERGNEQP----TQLQVVWQ---RSRDI 441
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ Y K + S + L Q +++ R L AWRD MAR DES
Sbjct: 442 CLKKYIKPLFS-------DESYLELYRRQK--KHLNTQQLAAFRLLFAWRDKMARQEDES 492
Query: 365 LRFVLSDQAIIALANKAP 382
+VL + ++ +A + P
Sbjct: 493 TGYVLPNHMLLKIAEELP 510
>gi|242218119|ref|XP_002474853.1| predicted protein [Postia placenta Mad-698-R]
gi|220725980|gb|EED79945.1| predicted protein [Postia placenta Mad-698-R]
Length = 882
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 187/387 (48%), Gaps = 49/387 (12%)
Query: 46 EPKPQHNFKRVLADNSYSPFKHANKEKSSGS--------HPYELEITALLENPRPEFDFS 97
+P QH F N+ P H +++ S HPY EI + P+ F+
Sbjct: 182 QPTLQHKF------NAQVPLGHNLRDEDSDEGLPGPSALHPYRYEIKHIT---YPDRMFA 232
Query: 98 NVDLDLQRS---DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIST 154
+ RS F WV + + + N L A+D E HS R+F GF L+Q+ST
Sbjct: 233 SAPPMSPRSFAETPFTWVADSTAFSAMLNKLRSAQEIAIDLEYHSYRTFGGFVCLMQLST 292
Query: 155 EKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
+ED++VDT+A+ DE+ L F D + KV HG+++D++WLQ+DF++Y+VNLFDT A
Sbjct: 293 REEDWVVDTLAVRDEMEALNEVFTDSQIVKVLHGAESDIVWLQQDFNLYIVNLFDTYHAS 352
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL-- 272
+VL P+ SLA LLE YC +K Q DWR RPLP EML YA++D H+LLYI L
Sbjct: 353 KVLDFPRHSLATLLEMYCDFTADKRYQLADWRIRPLPEEMLAYARSDTHFLLYIYDNLRN 412
Query: 273 ----VAELKQQGNENS---YCPDDKFNFVLEAS------------RRSNTVCLQVYTKEI 313
A+ + Q S P K L S RS L+VY KE
Sbjct: 413 ALLDRAQSRTQSRAQSPSASAPASKPGSPLPTSGNPAHSLVRLVLSRSEETALRVYEKET 472
Query: 314 ESYPGEAAAS-SIFFRLLNGQGGVSSISSVT-------QDLVRRLCAWRDLMARVHDESL 365
G R N ++S T + + R + AWRD +AR DES
Sbjct: 473 YDAEGSGPGGWDTLARKWNKGALIASAQEPTSGPLAMQRAVYRCVHAWRDRIAREEDEST 532
Query: 366 RFVLSDQAIIALANKAPANRTDVYTTI 392
R++L + + LA + PA+ + +T
Sbjct: 533 RYILPNHYLFILAERPPADMAALLSTF 559
>gi|410966020|ref|XP_003989536.1| PREDICTED: exosome component 10 isoform 1 [Felis catus]
Length = 887
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + V +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPEPQL-YRPVG-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 304 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQFQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNQQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|324501716|gb|ADY40761.1| Exosome component 10 [Ascaris suum]
Length = 892
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 173/316 (54%), Gaps = 25/316 (7%)
Query: 71 EKSSGSHPYELEITALLENPRPEFDFSNV-DLDLQRSDSFVWVETKSQLNELANALSKEF 129
++ +HPY+LE+ + P + + NV L + V V+ +L L + L+
Sbjct: 233 DQQESAHPYQLELETF-KVPPSQLELGNVRQLRPIKDTELVMVDDAEKLKMLRDELNSVS 291
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
FAVD E HS RSFLG T L+QIST+++DY++D + +++ IL F +P + KVFHGS
Sbjct: 292 KFAVDLEHHSYRSFLGLTCLMQISTDEKDYIIDPFPIWNDMQILNEPFTNPNILKVFHGS 351
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
+ DV WLQRDF IYVV +FDT A VL+ + SLA+L+++ C V +K LQ+ DWR RP
Sbjct: 352 EYDVQWLQRDFGIYVVGMFDTFCAMHVLNFAKYSLAHLVQSICNVTLDKELQKADWRVRP 411
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
L ++YA++D HYLLY L L +GNE++ N + S +C VY
Sbjct: 412 LTTAHIEYARSDTHYLLYCYDTLRQRLINEGNESN-------NLLRSTYNESALICRTVY 464
Query: 310 TK---EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLR 366
K E E Y LL G+ S++S ++ L WRD AR DESL
Sbjct: 465 KKPKFESEGYET----------LLRGR---KSLNSRQLYALKALWKWRDDRARAEDESLE 511
Query: 367 FVLSDQAIIALANKAP 382
+VL + ++ +A P
Sbjct: 512 YVLPNHMLLQIAEVLP 527
>gi|224144831|ref|XP_002325430.1| predicted protein [Populus trichocarpa]
gi|222862305|gb|EEE99811.1| predicted protein [Populus trichocarpa]
Length = 855
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 181/353 (51%), Gaps = 46/353 (13%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSS-GS---HPYE-LEITALLEN------PRPEFD 95
P+ +HN +L +NS F+H E+S GS HP E L + ++ P P
Sbjct: 170 PQEEHN---ILVNNSNRGFEHVWLERSEDGSRAIHPLEKLSVLDFVDKRIGDVEPAPPLP 226
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
S F VE L ELA L FAVD E + RSF G T L+QIST
Sbjct: 227 --------TESTPFKLVEEVKDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTR 278
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED++VDT+ L + L+ F DP KV HG+D D++WLQRDF IY+ NLFDT +A
Sbjct: 279 TEDFIVDTLKLRIHVGPYLREVFKDPAKRKVMHGADRDIVWLQRDFGIYICNLFDTGQAS 338
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
VL + SL YLL +CGV K Q +WR RPLP EM++YA+ D HYLL+I + A
Sbjct: 339 RVLKLERNSLEYLLHHFCGVTAKKEYQNAEWRLRPLPDEMIRYAREDTHYLLHIYDLMRA 398
Query: 275 EL--KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRL 329
L K N+N P ++E +RS VC+Q+Y KE+ SY + L
Sbjct: 399 LLLTKHSDNDNGDPP------LVEVYKRSYDVCMQLYEKELFTENSYLN-------MYGL 445
Query: 330 LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
N ++ +V L WRD +AR DES ++L ++ ++ +A + P
Sbjct: 446 PNAGFNAQQLA-----IVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMP 493
>gi|335290492|ref|XP_003127631.2| PREDICTED: exosome component 10 isoform 1 [Sus scrofa]
Length = 886
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + V+ +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPESVLQKPEPQL-YRPVE-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L K FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + L ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLALWERGNEQPA----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LDLYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|410966022|ref|XP_003989537.1| PREDICTED: exosome component 10 isoform 2 [Felis catus]
Length = 862
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + V +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPDSVLQKPEPQL-YRPVG-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 304 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQFQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN+ + V + RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNQQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|359319089|ref|XP_003638993.1| PREDICTED: exosome component 10 isoform 1 [Canis lupus familiaris]
Length = 861
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPESVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 304 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPTIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K + ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFVKPLFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|308810304|ref|XP_003082461.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
gi|116060929|emb|CAL57407.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
Length = 701
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 195/398 (48%), Gaps = 33/398 (8%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEF----DFSNVDLDL 103
+PQ F+ + DN H + G YE E+ P F + + +
Sbjct: 55 RPQDAFEDAV-DNRLENHSHKGLMRPIGFDSYEDFERKAREDAYPAFARESGGTTLPTPM 113
Query: 104 QRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT 163
V V+T+ L ELA L + FAVD E HS RSF GFT L+Q+ST ++D++VD
Sbjct: 114 DDEHPLVVVDTEDALEELATHLEQCKEFAVDLEHHSYRSFKGFTCLMQVSTREKDFVVDV 173
Query: 164 IALHDEI-SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+AL + L FADP KV HG+DNDV WLQ+DF I+V LFDT +A VL P K
Sbjct: 174 LALRSLVRDALGKAFADPNTLKVMHGADNDVQWLQKDFGIFVSCLFDTGQAARVLELPSK 233
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNE 282
+LAYLL+ YCG+ NK Q DWR RPL EML YA+ D HYLLY+ L L +G E
Sbjct: 234 ALAYLLQHYCGIKANKKFQLADWRVRPLTREMLDYARGDTHYLLYVYDELKKALAARG-E 292
Query: 283 NSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
NS + +S VCL+ Y P S + LL +++++
Sbjct: 293 NS---------IAATLTQSRDVCLKKY------LPPTFDEGSYYEDLLK-TNNLTNLNDP 336
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN--------RTDVYTTIAQ 394
+ L WRD AR DESL +V+ + ++ LA AP+ R V
Sbjct: 337 QLAVYAALFKWRDAAAREADESLGYVMPRELMLRLAIAAPSTKRALMEECRGQVPLIAKH 396
Query: 395 ADSDVDCLNLSSSLPSPS--PVVCSHLDDVERQVCNNV 430
A++ D ++ + ++ +PS P + +D + NV
Sbjct: 397 AETVADLISRARAMGAPSFKPSLVDPVDVTAVRTTANV 434
>gi|359319087|ref|XP_535408.4| PREDICTED: exosome component 10 isoform 2 [Canis lupus familiaris]
Length = 886
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPESVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 304 LLTCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPTIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K + ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFVKPLFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|71051605|ref|NP_001012748.1| exosome component 10 [Gallus gallus]
Length = 910
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 174/318 (54%), Gaps = 28/318 (8%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ +L+ P P+ + + + ++ T +L EL
Sbjct: 268 EQDMFAHPYQYELEHFSPPDGVLKKPEPQM-YRPI-----KETPCHFITTLDELVELNEK 321
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FA+D E HS RSFLG T L+QIST ED+++DT+ L ++SIL F DP + K
Sbjct: 322 LMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMSILNETFTDPAIVK 381
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
V HG+D+DV WLQ+DF +Y+VN+FDT +A +L+ + SL +LL+ YC V +K Q D
Sbjct: 382 VLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGKHSLDHLLKLYCSVDADKQYQLAD 441
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EM+QYA+ D HYLLYI + L ++GNE + V + RS +
Sbjct: 442 WRIRPLPEEMIQYARDDTHYLLYIYDKMREALWERGNEQP----TQLKVVWQ---RSRDI 494
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ Y K + S + L Q +++ R L +WRD AR DES
Sbjct: 495 CLKKYIKPLFS-------DESYLELYRRQK--KHLNTQQLAAFRLLFSWRDKTARQEDES 545
Query: 365 LRFVLSDQAIIALANKAP 382
+ +VL + ++ +A + P
Sbjct: 546 IGYVLPNHMLLKIAEELP 563
>gi|213408214|ref|XP_002174878.1| exosome complex exonuclease RRP6 [Schizosaccharomyces japonicus
yFS275]
gi|212002925|gb|EEB08585.1| exosome complex exonuclease RRP6 [Schizosaccharomyces japonicus
yFS275]
Length = 782
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 190/371 (51%), Gaps = 32/371 (8%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITA 85
PKPQ FK + ++ +P+ EK + HPYE EI
Sbjct: 134 PKPQLRFKHPVNNHPTTPWLWKLTEKPNALVPLEKLLDQVRADKALQLSLPHPYEAEIKN 193
Query: 86 LLENPRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFL 144
P+ ++ N V +WV+ L+ + L + AVD E H RS+
Sbjct: 194 S-SRPKQLYETKNPVQKGAVEETDPIWVDNSESLHSMLEELKQATEIAVDLEHHDYRSYS 252
Query: 145 GFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV 204
GF L+QIST +D++VDT+ L +E+ L F DP + KV HG+ DV+WLQRDF +Y+
Sbjct: 253 GFVCLMQISTRNQDWIVDTLELREELECLNIVFTDPKIIKVLHGATMDVIWLQRDFGLYL 312
Query: 205 VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
V LFDT A + L LA+LL+ YC +K Q DWR RPLP EML+YAQ+D H+
Sbjct: 313 VGLFDTYYATKALGFEGHGLAFLLKKYCQFEADKRYQMADWRIRPLPKEMLKYAQSDTHF 372
Query: 265 LLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASS 324
LLY+ CL EL +Q + +D +V+++ S+ V L+ Y E E+Y +
Sbjct: 373 LLYVFDCLRVELLEQSSRRK---EDLMQYVVKS---SDDVALRRY--EREAYDEIYGLGT 424
Query: 325 IFFR-LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+R +L G I + + L WRD +AR DES+R+V+ + ++ LA P+
Sbjct: 425 DGWRHVLTKWGSSKIIGREALAVFKSLHRWRDQVARNEDESVRYVMPNHLLVKLAASMPS 484
Query: 384 NRTDVYTTIAQ 394
+ +D+YT+ Q
Sbjct: 485 DPSDLYTSARQ 495
>gi|335290494|ref|XP_003356194.1| PREDICTED: exosome component 10 isoform 2 [Sus scrofa]
Length = 861
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P P+ + V+ +V + +L EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPESVLQKPEPQL-YRPVE-----ETPCHFVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L K FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + L ++GNE + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLALWERGNEQPA----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LDLYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|432098121|gb|ELK28008.1| Exosome component 10 [Myotis davidii]
Length = 876
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V +V + +L EL
Sbjct: 239 EQDMFAHPYQYELDHFTPPDSVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 292
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L K FA+D E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 293 LLKCQEFAIDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDLYILNESLTDPAIVK 352
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 353 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKHYCNVESNKQYQLAD 412
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 413 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 465
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 466 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 513
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 514 DESYGYVLPNHMMLKIAEELP 534
>gi|332250403|ref|XP_003274341.1| PREDICTED: exosome component 10 [Nomascus leucogenys]
Length = 912
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 176/325 (54%), Gaps = 42/325 (12%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L RS S L+EL
Sbjct: 274 EQDMFAHPYQYELNHFTPPDSVLQKPQPQ---------LYRSIEETPCHLISSLDELVE- 323
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP
Sbjct: 324 LNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDP 383
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK
Sbjct: 384 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 443
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 444 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---R 496
Query: 301 SNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLM 357
S +CL+ + K I ESY L Q + +T + L AWRD
Sbjct: 497 SRDICLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKT 544
Query: 358 ARVHDESLRFVLSDQAIIALANKAP 382
AR DES +VL + ++ +A + P
Sbjct: 545 ARREDESYGYVLPNHMMLKIAEELP 569
>gi|395329712|gb|EJF62098.1| hypothetical protein DICSQDRAFT_59413 [Dichomitus squalens LYAD-421
SS1]
Length = 861
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 200/401 (49%), Gaps = 54/401 (13%)
Query: 32 KLNQCPQYSCYLQSEPKPQHNFKRVLADN---SYSP-FKHA--------------NKEKS 73
+L+ Q++ YL KPQ +FKR + +N +++P KH +E S
Sbjct: 144 RLDPALQHASYLA---KPQLSFKRKVNNNRHTAWTPTLKHKYNAQVPLGYNLGEEGEEPS 200
Query: 74 SGSHPYELEITALLENPRPEFDFSNVDLDLQRS---DSFVWVETKSQLNELANALSKEFF 130
+ HPY EI + P F++ RS F WV T + + L
Sbjct: 201 TSLHPYRYEIRHIA---YPSRMFTSAPPISPRSFEETPFSWVSTPEDFATMLDKLRPASE 257
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
A+D E H+ R+F GF L+QIST ED++VDT+AL +E+ L F DP + KV HG++
Sbjct: 258 IAIDLEYHNYRTFSGFVCLMQISTRDEDFVVDTLALREELEELNEVFTDPNIVKVLHGAE 317
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D++WLQ+DF++Y+VNLFDT A +VL P+ LA LLE YC +K Q DWR RPL
Sbjct: 318 SDIVWLQQDFNLYIVNLFDTYHASKVLDFPRHGLASLLEMYCDFTADKRYQLADWRIRPL 377
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAEL--KQQGNENSYCPDDKFN---------------F 293
P EMLQYA++D H+LL+I L L + Q S
Sbjct: 378 PKEMLQYARSDTHFLLFIYDNLRNALLDRAQSRAQSRAQSPSSPTSTPPPDPSIPPAHVL 437
Query: 294 VLEASRRSNTVCLQVYTKEIESY-----PG--EAAASSIFFRLLNG---QGGVSSISSVT 343
V E RS L+VY KEI PG + A LL G + + +V
Sbjct: 438 VREVLSRSEETALRVYEKEIYDAEFGLGPGGWDTMARKWNKTLLIGSMAETNTGAAVNVQ 497
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ + R + AWRD +AR DES R+VL + I +LA + PA+
Sbjct: 498 RAVYRAVHAWRDKIAREEDESTRYVLPNHYIFSLAERTPAD 538
>gi|50286743|ref|XP_445801.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525107|emb|CAG58720.1| unnamed protein product [Candida glabrata]
Length = 737
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 181/372 (48%), Gaps = 58/372 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEI--- 83
KPQ NFK + ++ PFK EK + PYE EI
Sbjct: 131 KPQLNFKTPVDNSESHPFKPLLIEKPNALKSIEESTQLVLATEDIPEHFQQPYEYEILNQ 190
Query: 84 ---TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+LE P S VD + +WV+ + L ++ L K AVD E H
Sbjct: 191 EYNNDILEKKEPIPSTSWVDTNA------IWVDNINSLQDMMQELKKSSEIAVDLEHHDF 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST +DY+VDTIAL D++ +L F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGLVCLMQISTRTQDYIVDTIALRDDLKMLNEVFTNPLITKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+Y+V+LFDT A + L P+ SLAYLLE Y T+K Q DWR+RPL M+ YA+
Sbjct: 305 GLYIVSLFDTFHASKALGLPKHSLAYLLEKYANFKTSKKYQLADWRRRPLSKAMMAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I + L G K VL R S V L+ + E Y +
Sbjct: 365 DTHFLLNIFDQMRNGLISSG---------KLAGVL---RESRNVALRRF--EYSKYKPKI 410
Query: 321 AASSIF--------FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
++IF +R L Q I + L+R L WRD+MAR DES R+V+ +Q
Sbjct: 411 PVANIFTPVEKESPWRTLMYQYN---IPVDKEPLIRELYEWRDMMARRDDESPRYVMPNQ 467
Query: 373 AIIALANKAPAN 384
+++L P +
Sbjct: 468 LLVSLVAYGPVD 479
>gi|431906334|gb|ELK10531.1| Exosome component 10 [Pteropus alecto]
Length = 883
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V +V + +L EL
Sbjct: 244 EQDMFAHPYQYELDHFTPPDSVLQKPQPQL-YRPVG-----ETPCHFVSSLDELVELNEK 297
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP + K
Sbjct: 298 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVK 357
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 358 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLAD 417
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 418 WRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 470
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 471 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 518
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 519 DESYGYVLPNHMMLKIAEELP 539
>gi|326932437|ref|XP_003212324.1| PREDICTED: exosome component 10-like [Meleagris gallopavo]
Length = 888
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 173/318 (54%), Gaps = 28/318 (8%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ +L+ P P+ + + + ++ T +L EL
Sbjct: 246 EQDMFAHPYQYELEHFSPPDGVLKKPEPQM-YRPI-----KETPCHFITTLDELVELNEK 299
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FA+D E HS RSFLG T L+QIST ED+++DT+ L ++SIL F DP + K
Sbjct: 300 LMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMSILNETFTDPAIVK 359
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
V HG+D+DV WLQ+DF +Y+VN+FDT +A +L+ + SL +LL+ YC V +K Q D
Sbjct: 360 VLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGKHSLDHLLKLYCSVDADKQYQLAD 419
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EM+QYA+ D HYLLYI + L + GN+ + V + RS +
Sbjct: 420 WRIRPLPEEMIQYARDDTHYLLYIYDKMREALWEGGNKQP----TQLKVVWQ---RSRDI 472
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ Y K + S + L Q + +T R L +WRD AR DES
Sbjct: 473 CLKKYIKPLFS-------DESYLELYRRQKRHLNTQQLT--AFRLLFSWRDKTARQEDES 523
Query: 365 LRFVLSDQAIIALANKAP 382
+ +VL + ++ +A + P
Sbjct: 524 IGYVLPNHMLLKIAEELP 541
>gi|50306309|ref|XP_453127.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642261|emb|CAH00223.1| KLLA0D01309p [Kluyveromyces lactis]
Length = 744
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 195/388 (50%), Gaps = 44/388 (11%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVL--ADNSYSPF----KHANKEKSSGSH- 77
R + K + PQ S + H FK +L +S PF K +E+S SH
Sbjct: 120 RSNNKPSKRIEKPQLSFKTPVDNTELHPFKPLLEYKPHSLQPFEISLKMVPEEESIPSHY 179
Query: 78 --PYELEI--------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
PYE EI + P P D+ + +WV+T LN++ + LSK
Sbjct: 180 PHPYEYEIDHQKYNDSILVATEPIPSKDWDETEA--------IWVDTVEGLNKMKDELSK 231
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
A+D E H RS+ G L+QIS + D++VDTIAL +E+ IL F DP V KV H
Sbjct: 232 ATELAIDLEHHDYRSYYGIVCLMQISDREHDWIVDTIALREELYILNDIFTDPNVTKVLH 291
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +Y+V LFDT A +L P+ SLAYLLE + T+K Q DWR
Sbjct: 292 GAFMDIIWLQRDLGLYIVGLFDTYHASRMLGFPKHSLAYLLERFANFKTSKKYQLADWRI 351
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL ML YA+ D H+LL I L NS +K + VL SR+ V +
Sbjct: 352 RPLTKPMLAYARADTHFLLNIFDKL---------RNSLLEQNKMSDVLHESRK---VAKR 399
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVS-----SISSVTQDLVRRLCAWRDLMARVHD 362
+ E S+ + +S++F + + + +I + + L+RRL WRD +AR D
Sbjct: 400 RF--EYSSFRPKVPSSAVFSPIEKDEPWKNIMFQYNIPASKELLLRRLYEWRDTIARRDD 457
Query: 363 ESLRFVLSDQAIIALANKAPANRTDVYT 390
ES R+V+ +Q +++L AP +V +
Sbjct: 458 ESPRYVMPNQLLVSLVAGAPTEPINVLS 485
>gi|119592084|gb|EAW71678.1| exosome component 10, isoform CRA_b [Homo sapiens]
Length = 884
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|124359359|gb|ABD28520.2| HRDC; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 341
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 154/267 (57%), Gaps = 14/267 (5%)
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISI-LQPFFADPGVCKVFH 187
FF VD E + RSF G T L+QIST ED++VDT+ L D + L+ F DP KV H
Sbjct: 12 FFLLVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLRDVFMDPTKKKVLH 71
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+D D++WLQRDF IY+ N+FDT +A VL + SL +LL+ +CGV NK Q DWR
Sbjct: 72 GADRDIVWLQRDFGIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRA 131
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP M++Y + D HYLLYI + +L + E S PDD +LE +RS VC+Q
Sbjct: 132 RPLPDVMIKYGREDTHYLLYIYDLMRIKLFELSKE-SESPDDP---LLEVYQRSYNVCMQ 187
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+Y K++ + S + + L G G +V V L WRD++AR DES +
Sbjct: 188 LYEKDLLT-----ENSFLNIKGLRGAGFNGQQLAV----VSGLYEWRDVLARAEDESTGY 238
Query: 368 VLSDQAIIALANKAPANRTDVYTTIAQ 394
+L ++ I+ +A P +++ IA+
Sbjct: 239 ILPNKVILLIAKHMPVTASNLRRLIAE 265
>gi|119592083|gb|EAW71677.1| exosome component 10, isoform CRA_a [Homo sapiens]
Length = 899
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|190344443|gb|EDK36119.2| hypothetical protein PGUG_00217 [Meyerozyma guilliermondii ATCC
6260]
Length = 755
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 195/375 (52%), Gaps = 66/375 (17%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HANK--EKS----SGS------------HPYELE 82
KPQ FK + ++ +PFK HA K E+S SG+ HPYE E
Sbjct: 139 KPQQFFKTKIDNSESAPFKPKLTSKPHALKSFEESCNLRSGADTEFGKDPDYFPHPYEYE 198
Query: 83 ITAL--------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVD 134
I L + P+ D++ S S +WVET+S L+++ + LS + AVD
Sbjct: 199 IDTLEYPESVLEISEPKKPKDWT--------STSAIWVETESDLSQMVSDLSSQTEIAVD 250
Query: 135 TEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVM 194
E H RS+LG L+QIS+ ++D+++DT+ L D + +L FA+P + KVFHG+ D++
Sbjct: 251 LEHHDYRSYLGIVCLMQISSREKDWIIDTLKLRDSLVVLNEIFANPNIVKVFHGAFMDII 310
Query: 195 WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEM 254
WLQRD +YVV+LFDT A + L P+ SLAYLLE Y T+K Q DWR RPL M
Sbjct: 311 WLQRDLGLYVVSLFDTYHASKKLGLPRFSLAYLLENYANFKTSKKYQLADWRMRPLSGPM 370
Query: 255 LQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIE 314
L YA++D H+LLY+ L +L G++ K VL SR QV + E
Sbjct: 371 LSYARSDTHFLLYVYDQLRNQLLSSGSQ-------KMKEVLHESR-------QVAKRRFE 416
Query: 315 SY---PGEAAASSIFFRLL--NGQGGVSSISSV------TQDLVRRLCAWRDLMARVHDE 363
P + S + ++ N + SSI + T+ +V L WRD A+ DE
Sbjct: 417 FTRFRPTSVSGSKVSCPIMAPNAKEPYSSIMNQFNLPNHTRPIVEALYLWRDAKAKECDE 476
Query: 364 SLRFVLSDQAIIALA 378
S+R+V+ +Q ++ +
Sbjct: 477 SVRYVMPNQLLVNFS 491
>gi|326431455|gb|EGD77025.1| hypothetical protein PTSG_07367 [Salpingoeca sp. ATCC 50818]
Length = 848
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 175/317 (55%), Gaps = 30/317 (9%)
Query: 77 HPYELEITALLENPRPEFDFSNV----DLDLQRSDSFVWVETKSQLNELANALSKEFFFA 132
HPYE E+ A +P D +N+ +D ++ +V T QL ++ +AL E A
Sbjct: 231 HPYEHELRAF----QPVADAANIRQKRSIDECANNPATFVNTVDQLQDVLSALKGEREVA 286
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDND 192
VD E H++RS+ GFT L+Q+ST D+L+DT+AL + +L + +C V HG+D+D
Sbjct: 287 VDLEAHNVRSYQGFTCLMQVSTRTRDFLIDTLALRGHLEVL-----NECLC-VLHGADSD 340
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +Y+V LF A VL P+ SLAYLL+ ++ +K Q DWR RPLPA
Sbjct: 341 ILWLQRDHGLYIVCLFVCLFAMRVLGYPKYSLAYLLKHLFHLSLDKRHQLSDWRIRPLPA 400
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE 312
+M YAQ D HYLL L AEL ++GNEN+ N + RS +CLQ Y E
Sbjct: 401 DMCVYAQADTHYLLDAHDALKAELLERGNENA-------NLLRSVFTRSTDICLQRY--E 451
Query: 313 IESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
+ Y E A RL N Q + + + R L AWRD +AR DES R+V+ D
Sbjct: 452 VPKYDEEQA-----MRLYNRQSLALTPKGLA--IFRALHAWRDAVARREDESPRYVMEDH 504
Query: 373 AIIALANKAPANRTDVY 389
+ +LA AP + V+
Sbjct: 505 MLFSLARNAPTQPSQVF 521
>gi|50301240|ref|NP_001001998.1| exosome component 10 isoform 1 [Homo sapiens]
gi|8928564|sp|Q01780.2|EXOSX_HUMAN RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2; AltName: Full=P100 polymyositis-scleroderma
overlap syndrome-associated autoantigen; AltName:
Full=Polymyositis/scleroderma autoantigen 100 kDa;
Short=PM/Scl-100; AltName: Full=Polymyositis/scleroderma
autoantigen 2
gi|35555|emb|CAA46904.1| PM/Scl 100kD nucleolar protein [Homo sapiens]
gi|25140242|gb|AAH39901.1| Exosome component 10 [Homo sapiens]
gi|49257470|gb|AAH73788.1| Exosome component 10 [Homo sapiens]
gi|119592085|gb|EAW71679.1| exosome component 10, isoform CRA_c [Homo sapiens]
gi|190690525|gb|ACE87037.1| exosome component 10 protein [synthetic construct]
gi|190691893|gb|ACE87721.1| exosome component 10 protein [synthetic construct]
gi|261858988|dbj|BAI46016.1| exosome component 10 [synthetic construct]
Length = 885
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|393243266|gb|EJD50781.1| hypothetical protein AURDEDRAFT_159928 [Auricularia delicata
TFB-10046 SS5]
Length = 837
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 196/371 (52%), Gaps = 35/371 (9%)
Query: 30 RRKLNQCPQYSCYLQSEPKPQHNF----KRVLADNSYS--PFKHANKEKSSG--SHPYEL 81
+R L+ + LQ +P P NF + L++ +++ P + E SG HPY
Sbjct: 168 KRLLHDPTIHKPQLQFKP-PVDNFATSWRPALSEKAHAKRPLEEDGMEVDSGLPYHPYRY 226
Query: 82 EITA------LLENPR--PEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAV 133
EIT + E P P+ F + F V T + ++ + L AV
Sbjct: 227 EITHIEYADHMFEAPELSPQKSFEAI--------PFTLVTTPHEFAQMLSKLRSAREMAV 278
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDV 193
D E HS R++ GF L+QIST +ED++VD +A+ +E+ L FAD + KVFHG+++D+
Sbjct: 279 DLEHHSYRTYAGFLCLMQISTREEDWVVDLLAVREEVPKLAEVFADENIVKVFHGAESDI 338
Query: 194 MWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAE 253
+WLQ+DF +Y+VNLFDT A +VL P+ SLA LLE Y +K Q DWR RP+PAE
Sbjct: 339 VWLQQDFSLYIVNLFDTYHASKVLEFPKHSLASLLEAYTDFTPDKRYQLADWRIRPIPAE 398
Query: 254 MLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI 313
ML YA++D H+LL+I L L Q+ + + + + E RRS L+ Y +
Sbjct: 399 MLLYARSDTHFLLHIYDKLRELLLQRSSGTA-------DLIREVLRRSEETALRTYV--L 449
Query: 314 ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQA 373
E+Y + + + + +L + + + + + + WRD +AR DES R+V+ + +
Sbjct: 450 ETYDTQRGSGANGWEILAKKWN-KGLHGLPLAVYKAVHEWRDTVARTTDESTRYVMGNSS 508
Query: 374 IIALANKAPAN 384
+ LA+ P +
Sbjct: 509 LFKLADAQPTD 519
>gi|4505917|ref|NP_002676.1| exosome component 10 isoform 2 [Homo sapiens]
gi|179283|gb|AAB59352.1| PM-Scl autoantigen [Homo sapiens]
gi|11136976|emb|CAC15569.1| PM-scl autoantigen [Homo sapiens]
Length = 860
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|212528170|ref|XP_002144242.1| exosome component 3'-5' exonuclease [Talaromyces marneffei ATCC
18224]
gi|210073640|gb|EEA27727.1| exosome complex exonuclease Rrp6, putative [Talaromyces marneffei
ATCC 18224]
Length = 795
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 190/392 (48%), Gaps = 34/392 (8%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEI 83
R+ R++ + P Y S+ PKPQ F+ ++ SPF+ K K P E +
Sbjct: 123 REASTRQQEKKFPTIYDYGPSKIPKPQLQFRTAPNNHDTSPFRPLLKSKPHAIVPLEQSL 182
Query: 84 TALLENPRPEFDFSN---------------------VDLDLQRSDSFVWVETKSQLNELA 122
+ +P F + N VD S VWV+T + E+
Sbjct: 183 RLVEAEKKPAF-YPNPYEKEIRDAKFPESAYVAAPPVDFGPVESTEAVWVDTPEGVAEMV 241
Query: 123 NALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPG 181
L K AVD E H + ++ G +L+QIST +D++VDT+ +++ L FADP
Sbjct: 242 KELKKANEIAVDLEHHDMHTYYGLVSLMQISTRDKDWVVDTLQPWREDLQQLNEVFADPN 301
Query: 182 VCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQ 241
+ KVFHGS D++WLQRD +YVV LFDT A L P++SL +LLE Y +K Q
Sbjct: 302 ILKVFHGSTMDIVWLQRDLGLYVVGLFDTYHAAVALGFPKRSLKFLLEKYARYEADKKYQ 361
Query: 242 REDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRS 301
DWR RPL EML+YA+ D HYLLYI CL EL E S ++ ++VLE RS
Sbjct: 362 MADWRLRPLTEEMLRYARADTHYLLYIYDCLRNELL----EKSTPKRNQIDYVLE---RS 414
Query: 302 NTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
T LQ Y + + G A + LL+ + S + R + WRD +AR
Sbjct: 415 KTEALQRYERPVYDMAGGQGAGG-WHDLLSRNPALLSKEQFA--VFRAVHEWRDRVAREE 471
Query: 362 DESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
DE L+ V + +A P ++ ++ T++
Sbjct: 472 DEGLQCVFPRHMLFKVAIAMPVDKHTLFKTLS 503
>gi|409075144|gb|EKM75528.1| hypothetical protein AGABI1DRAFT_79866 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 882
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 194/410 (47%), Gaps = 81/410 (19%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSG-------------------SHPYELEITALL 87
PKPQ +FK ADN +P+ + K + +HPY EI +
Sbjct: 162 PKPQLSFK-YKADNDDAPWYPSLTHKYNALVPLGHVYADADDDTTVIANHPYRYEINHIT 220
Query: 88 --------ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHS 139
NP P + + W+ T L + L AVD E HS
Sbjct: 221 YPSHVYAPANPSPPASLAET--------PYSWISTPDGLQNMLTKLRAASEIAVDLEHHS 272
Query: 140 LRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRD 199
R++LGF L+QIST +ED++VD IAL DE+ +L F DP + KVFHG+++D++WLQ+D
Sbjct: 273 YRTYLGFLCLMQISTREEDFVVDVIALRDEMEVLNEVFTDPKIVKVFHGAESDIVWLQQD 332
Query: 200 FHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQ 259
F++YVVNLFDT A ++L P+ LA LLE YC +K Q DWR RPLP EML+YA+
Sbjct: 333 FNLYVVNLFDTYHASKLLEFPRHGLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYAR 392
Query: 260 TDAHYLLYIAKCLVAELKQQG------------NENSYCPDDKFNFV------------- 294
+D H+LL+I L L +G N ++ N +
Sbjct: 393 SDTHFLLFIYDNLRNALLDRGGPASRSRSSSPPNASTSLSTPPANILRTPPPTAHASKNP 452
Query: 295 LEAS-----RRSNTVCLQVYTKEI---ESYPGEAAASSI-------FFRLLNGQGGVSS- 338
L AS RS+ CL+VY KE+ S G ++ F L+ SS
Sbjct: 453 LHASINHVLTRSSETCLRVYVKEVYDRSSGTGSNGWDTLARKWNKPLFTALSFSYQSSSD 512
Query: 339 ----ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ + + + R + WR+ ++R DES R+VL +Q + +A P +
Sbjct: 513 EGHNVPEMQKAVYRAVHWWRESVSREEDESTRYVLPNQYLFRIAEAPPGD 562
>gi|356565747|ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 889
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 179/341 (52%), Gaps = 19/341 (5%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYE-LEITALLENPRPEFDFSNVDLD 102
+PQ + ++ +N+ PF+H ++S HP E L + ++ D V
Sbjct: 193 RPQDEYN-IVVNNANMPFEHVWLQRSDDGLSFIHPLEKLSVLNFVDTNL--GDVVPVKPP 249
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
S F VE L ELA L FAVD E + RSF G T L+QIST ED++VD
Sbjct: 250 SIESTPFKLVEEVKDLKELAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVD 309
Query: 163 TIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ 221
T+ L I L+ F DP KV HG+D D+ WLQRDF IY+ NLFDT +A ++L+ +
Sbjct: 310 TLKLRIHIGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNLFDTHQASKLLNLER 369
Query: 222 KSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
SL ++L +C V NK Q DWR RPLP EM++YA+ D HYLLYI + +L
Sbjct: 370 NSLEHILHHFCEVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDLMRIKLFALSK 429
Query: 282 ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISS 341
E+ V E +RS VC+Q+Y KE+ + + + QG +
Sbjct: 430 ESESSESSDTPLV-EVYKRSYDVCIQLYEKEL-------LTENSYLHIYGLQGAGFNAQQ 481
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +V LC WRD++AR DES +VL +++++ +A + P
Sbjct: 482 LA--IVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMP 520
>gi|47228827|emb|CAG07559.1| unnamed protein product [Tetraodon nigroviridis]
Length = 550
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 170/313 (54%), Gaps = 28/313 (8%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV---WVETKSQLNELANALSKEFFFA 132
+HPY+ E+ L+ PE S + L + + ++ T +L L L + FA
Sbjct: 222 AHPYQYELDHLM---IPESLLSKSEPQLYKPVAETKCSFITTLEELAALNEKLCQLSEFA 278
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDND 192
VD E HS RSFLG T L+QIST +ED+++DT+ L E+ IL F DP + KVFHG+D+D
Sbjct: 279 VDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNEAFTDPAIVKVFHGADSD 338
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
+ WLQRDF +YVV LFDT +A L+ + SL +LL +C VA++K Q DWR RPLP
Sbjct: 339 IEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNVASDKRYQLADWRIRPLPE 398
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE 312
EM+QYA+ D HYLLYI C+ A+L + N P + RS + L+ Y K
Sbjct: 399 EMVQYARADTHYLLYIYDCVRAQLL---DFNHGQP----GLLKSVWDRSRDISLKKYMKP 451
Query: 313 I---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
I ESY L Q S ++ R L AWRD +AR DES +VL
Sbjct: 452 IFTEESY----------LELQRKQK--KSFNTQQLAAFRLLFAWRDKLARQEDESTGYVL 499
Query: 370 SDQAIIALANKAP 382
+I ++ + P
Sbjct: 500 PTHMMIKISEELP 512
>gi|307212494|gb|EFN88225.1| Exosome component 10 [Harpegnathos saltator]
Length = 804
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 178/354 (50%), Gaps = 38/354 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-----------------SHPYELEITALLENP 90
KPQ FK + +NS+ P+ KEK + SHPY E+ E P
Sbjct: 97 KPQLMFKDKI-NNSFKPWMPRIKEKPNSLKPLALYLEEGENGEIFSHPYGFELNKF-EMP 154
Query: 91 RPEFDFSNVDLDLQRSDS--FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
+ S + + + D+ F+++ T S + + + L + AVD E HS RSF G T
Sbjct: 155 ECQLKKS-IPVKYKSLDNTQFIYISTPSDIKIILDDLKRYNEIAVDLEHHSYRSFQGVTC 213
Query: 149 LIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLF 208
L+QIST DYL+DT+ L E+ L F P + KVFHG+D D+ WLQRD +YVVN+F
Sbjct: 214 LMQISTVDTDYLIDTLILRSELHQLNEIFTKPTILKVFHGADFDIQWLQRDLSLYVVNMF 273
Query: 209 DTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
DT +A + L+ P SLA+LL+ YC + NK Q DWR RPLP E+++YA+ D HYLL+I
Sbjct: 274 DTHQAAKQLNFPYLSLAFLLKKYCNINPNKHFQLADWRIRPLPEELMKYAREDTHYLLHI 333
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
L EL + N S N + S +C + Y K I + +
Sbjct: 334 KDMLKNELIELANGQS-------NILKAVYDMSTDICKRTYVKPIWTEESCMNTYRKSQK 386
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ N + + + L WRDL AR D+S+ +VL + ++ +A P
Sbjct: 387 MFNNKQLYA---------FKELHKWRDLTAREEDDSINYVLPNHMLLNIAETLP 431
>gi|410215482|gb|JAA04960.1| exosome component 10 [Pan troglodytes]
gi|410256428|gb|JAA16181.1| exosome component 10 [Pan troglodytes]
gi|410289248|gb|JAA23224.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|397503016|ref|XP_003822132.1| PREDICTED: exosome component 10 [Pan paniscus]
Length = 909
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|328776419|ref|XP_003249163.1| PREDICTED: exosome component 10-like [Apis mellifera]
Length = 1271
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 168/327 (51%), Gaps = 21/327 (6%)
Query: 60 NSYSPFKHANKEKSSG---SHPYELEITALLENPRPEFDFSNVDLDLQRSDSF-VWVETK 115
NS P +E +G +HPYE E+ + P + S D+ V ++
Sbjct: 207 NSLKPLAIYLEESENGEVFNHPYEYELNMFVP-PNDQLKKSEPTKYKNLEDTLLVMIKDP 265
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
S + L N L + AVD E HS RSF G T L+QISTE +DYL+DT++L E+ L
Sbjct: 266 SDIKLLINDLKQYKEIAVDLEHHSYRSFQGITCLMQISTEDKDYLIDTLSLRSELHELNE 325
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
F P + KVFHG+D D+ WLQRD +YVVN+FDT +A + L+ P SLAYLL+ YC V
Sbjct: 326 IFTKPTILKVFHGADLDIQWLQRDLSLYVVNMFDTHQAAKQLNLPYLSLAYLLKHYCNVD 385
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
+K Q DWR RPLP ++++YA+ D HYLLYI L L N + N +
Sbjct: 386 PDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKDMLKNALIDVAN-------GQINILK 438
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
RS +C + Y K I + ++ N + + +R L WRD
Sbjct: 439 VVYDRSTEICKKTYVKPIWTEENCMTMYRKSQKMFNNKQLYA---------LRELHKWRD 489
Query: 356 LMARVHDESLRFVLSDQAIIALANKAP 382
AR+ D+S+ +VL + ++ +A P
Sbjct: 490 DTARIEDDSIAYVLPNHMLLNIAETLP 516
>gi|410350403|gb|JAA41805.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|343962561|dbj|BAK62868.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|332807618|ref|XP_001136533.2| PREDICTED: exosome component 10 isoform 4 [Pan troglodytes]
Length = 909
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|410256430|gb|JAA16182.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|410215484|gb|JAA04961.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|194383644|dbj|BAG59180.1| unnamed protein product [Homo sapiens]
Length = 679
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 28/318 (8%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ + K I + E+ + L Q + +T + L AWRD AR DES
Sbjct: 477 CLKKFIKPI--FTDES-----YLELYRKQKKHLNTQQLTA--FQLLFAWRDKTARREDES 527
Query: 365 LRFVLSDQAIIALANKAP 382
+VL + ++ +A + P
Sbjct: 528 YGYVLPNHMMLKIAEELP 545
>gi|336467546|gb|EGO55710.1| hypothetical protein NEUTE1DRAFT_86290 [Neurospora tetrasperma FGSC
2508]
gi|350287803|gb|EGZ69039.1| hypothetical protein NEUTE2DRAFT_115146 [Neurospora tetrasperma
FGSC 2509]
Length = 825
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 206/431 (47%), Gaps = 68/431 (15%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFK-------HA--------- 68
R Q+R + N +S + KPQ+NF+R + + + P+K HA
Sbjct: 124 RAQKRVKSSNDRLDWSLKRANILKPQNNFERKVDNFNTGPWKPLLSSKPHAKVSLEDSLT 183
Query: 69 ----NKEKSSGSHPYELEITALLENPRPEFDFSN------VDLDLQRSDSFVWVETKSQL 118
+ + HPYE EI P PE + + +D S S +WV+T +
Sbjct: 184 TFVDDDNNTQYKHPYETEIKT---TPYPEHVYKKREPKEYLPID---STSAIWVDTYEGV 237
Query: 119 NELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFF 177
E+ L + A+D E H RS+ G +L+QIST ++D+++DT+ ++ +L F
Sbjct: 238 LEMLEELKQAKEIALDLEHHDFRSYTGLLSLMQISTREKDWVIDTLQPWRHKLEVLNEVF 297
Query: 178 ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATN 237
ADP + KV HG+ DV+WLQRD +YVV LFDT AC VL P +SL YLL + +
Sbjct: 298 ADPNIVKVLHGAFMDVIWLQRDLGLYVVGLFDTYHACAVLGYPGRSLGYLLSKFAEFEAD 357
Query: 238 KFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEA 297
K Q DWR RPLP EM YA++D HYLLYI ++ EL ++ PD + +
Sbjct: 358 KKYQLADWRIRPLPEEMFYYARSDTHYLLYIFDMIINELVERSTPGKPKPD----LLEQV 413
Query: 298 SRRSNTVCLQVY---TKEIESYPGEAAASSIFFR---LLNGQGGVSSISSVTQDLVRRLC 351
RS V LQ Y + +E+ G ++ + L NG+ + + +
Sbjct: 414 LERSKDVALQRYENLSYNVETGQGPRGWYNVLLKSPTLYNGEQFA---------VYKAVH 464
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSP 411
WRD +AR DES F ++ Q + +A P ++ +++ + DS+ L
Sbjct: 465 QWRDNLARREDESPFFFMTQQVLADIARILPTDKKALWSIL---DSNAKGLK-------- 513
Query: 412 SPVVCSHLDDV 422
SHLDD+
Sbjct: 514 -----SHLDDL 519
>gi|395841111|ref|XP_003793392.1| PREDICTED: exosome component 10 [Otolemur garnettii]
Length = 881
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ +V + +L EL
Sbjct: 245 EQDMFAHPYQYELDHFTPPDSVLQKPQPQL-YRPIE-----ETPCHFVSSLDELVELNEK 298
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL F DP + K
Sbjct: 299 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFVIDTLELRSDLYILNESFTDPAIVK 358
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 359 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLAD 418
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++G + V + RS +
Sbjct: 419 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGGGRPV----QSQVVWQ---RSRDI 471
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 472 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 519
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 520 DESYGYVLPNHMMLKIAEELP 540
>gi|238879034|gb|EEQ42672.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 786
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 172/318 (54%), Gaps = 32/318 (10%)
Query: 76 SHPYELEIT------ALL--ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
+ PYE EI A+L +P P D+S S +WV+T +L ++ L K
Sbjct: 199 AQPYEYEIDNQPYPDAILAKSDPIPPKDWS--------STKAIWVDTVEELQKMVQELKK 250
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
AVD E H RS+ G L+QIS ++D+++DT+AL D++++L FADP + KVFH
Sbjct: 251 STEIAVDLEHHDYRSYYGIVCLMQISNREQDWIIDTLALRDDLTVLNEVFADPDIVKVFH 310
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +YVV+LFDT A L P+ SLAYLLE Y T+K Q DWR
Sbjct: 311 GAFMDIIWLQRDLGLYVVSLFDTFHASRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRI 370
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL ML YA++D H+LL+I L +N +K + VL SR+ +
Sbjct: 371 RPLSPPMLAYARSDTHFLLFIYDQL---------KNKLIDAEKLSQVLYDSRQVAKRRFE 421
Query: 308 VYTK---EIESYPGEAAASSIFFRLLNGQGGVSS---ISSVTQDLVRRLCAWRDLMARVH 361
YTK ++ + + F G + S + + +V L WRDLMA+
Sbjct: 422 -YTKYRPMANTFSNKVTCPVMAFNPKEPWGSIVSQYNVPHFKRPVVEVLYKWRDLMAKKQ 480
Query: 362 DESLRFVLSDQAIIALAN 379
DES+R+++ +Q +++LAN
Sbjct: 481 DESVRYIMPNQLLVSLAN 498
>gi|355744909|gb|EHH49534.1| hypothetical protein EGM_00210 [Macaca fascicularis]
Length = 887
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|297282176|ref|XP_001103657.2| PREDICTED: exosome component 10-like isoform 3 [Macaca mulatta]
Length = 884
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|189237006|ref|XP_966807.2| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 947
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 144/257 (56%), Gaps = 10/257 (3%)
Query: 60 NSYSP---FKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKS 116
NS P F +++ SHPYE E+ P D +V + ++
Sbjct: 204 NSLKPLAIFLEEYEDRQEYSHPYEFELDRFQPTPSQLIDEKSVPPKSLSDTPLIEIDKAE 263
Query: 117 QLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPF 176
QL+EL L F+VD E HS RSF+G T LIQISTE +DYL+D +AL D++SIL
Sbjct: 264 QLDELVETLRHCKEFSVDVEHHSYRSFMGITCLIQISTEDKDYLIDALALRDKLSILNEV 323
Query: 177 FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVAT 236
F + K+FHG+D D+ WLQRD +YVVN+FDT +A + L P SLA+L++ +C V
Sbjct: 324 FTKNTIVKIFHGADKDIEWLQRDLSLYVVNMFDTHQAAKALQYPALSLAFLMKKFCNVTP 383
Query: 237 NKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLE 296
NK Q DWR RPLP E+ YA+ D HYL+YI K + EL + N+ C D V+E
Sbjct: 384 NKQFQLADWRIRPLPDELKSYAREDTHYLIYIYKMMKRELLHKTNK---C-DKLLRSVIE 439
Query: 297 ASRRSNTVCLQVYTKEI 313
RS VC + Y K I
Sbjct: 440 ---RSTEVCKKRYFKPI 453
>gi|108997029|ref|XP_001103741.1| PREDICTED: exosome component 10-like isoform 4 [Macaca mulatta]
gi|355557539|gb|EHH14319.1| hypothetical protein EGK_00224 [Macaca mulatta]
Length = 884
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|380813854|gb|AFE78801.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419273|gb|AFH32850.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947748|gb|AFI37479.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 882
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|270007326|gb|EFA03774.1| hypothetical protein TcasGA2_TC013885 [Tribolium castaneum]
Length = 890
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 144/257 (56%), Gaps = 10/257 (3%)
Query: 60 NSYSP---FKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKS 116
NS P F +++ SHPYE E+ P D +V + ++
Sbjct: 204 NSLKPLAIFLEEYEDRQEYSHPYEFELDRFQPTPSQLIDEKSVPPKSLSDTPLIEIDKAE 263
Query: 117 QLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPF 176
QL+EL L F+VD E HS RSF+G T LIQISTE +DYL+D +AL D++SIL
Sbjct: 264 QLDELVETLRHCKEFSVDVEHHSYRSFMGITCLIQISTEDKDYLIDALALRDKLSILNEV 323
Query: 177 FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVAT 236
F + K+FHG+D D+ WLQRD +YVVN+FDT +A + L P SLA+L++ +C V
Sbjct: 324 FTKNTIVKIFHGADKDIEWLQRDLSLYVVNMFDTHQAAKALQYPALSLAFLMKKFCNVTP 383
Query: 237 NKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLE 296
NK Q DWR RPLP E+ YA+ D HYL+YI K + EL + N+ C D V+E
Sbjct: 384 NKQFQLADWRIRPLPDELKSYAREDTHYLIYIYKMMKRELLHKTNK---C-DKLLRSVIE 439
Query: 297 ASRRSNTVCLQVYTKEI 313
RS VC + Y K I
Sbjct: 440 ---RSTEVCKKRYFKPI 453
>gi|380813852|gb|AFE78800.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419271|gb|AFH32849.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947746|gb|AFI37478.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 884
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|402852919|ref|XP_003891154.1| PREDICTED: exosome component 10 [Papio anubis]
Length = 844
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 210 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 263
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 264 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 323
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 324 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 383
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 384 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 436
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 437 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 484
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 485 DESYGYVLPNHMMLKIAEELP 505
>gi|393212538|gb|EJC98038.1| hypothetical protein FOMMEDRAFT_149467 [Fomitiporia mediterranea
MF3/22]
Length = 845
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 213/418 (50%), Gaps = 63/418 (15%)
Query: 10 AITIASLAAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVL--ADNSYSP-FK 66
AI++ A S FT R+ R L+ ++ YL PKPQ F+R + A +S+SP +
Sbjct: 131 AISVKPPPAAST-FTSSTRQGR-LDPSLLHAAYL---PKPQLKFRRRINSAQSSWSPNLR 185
Query: 67 HA-----------------------NKEKSSGSHPYELEITALLENPRPEFDFSN-VDLD 102
H + S HPY EI + + R F+ + +
Sbjct: 186 HKYNAQVPLGYVFHDTDVIEGDSCLGEGTSQSFHPYRYEIKHITYS-RQMFEHRHPIRPS 244
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+ F W+++K QL+ L + L AVD E HS RSF GF L+QIST +ED+++D
Sbjct: 245 SFENTPFTWIDSKEQLDLLLDQLRHVQEIAVDLEHHSYRSFSGFLCLMQISTREEDFIID 304
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
T+AL +E+ L F DP + KV HG+D+DV+WLQ+DF+IY+VNLFDT A ++L P+
Sbjct: 305 TLALREELEELNEIFTDPKIVKVLHGADSDVVWLQQDFNIYIVNLFDTYHASKLLDFPKH 364
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNE 282
L LLE YC +K Q DWR RPLP EM++YA++D H+LLYI L L +
Sbjct: 365 GLGALLEMYCDFVPDKRYQLADWRIRPLPDEMMKYARSDTHFLLYIYDNLRNALLDRARG 424
Query: 283 NSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ--GGVSSIS 340
PD V A RS L++Y E F+ L NG GG +++S
Sbjct: 425 Q---PD----LVRSALSRSEDTALRIYEPE-------------FYDLENGTGPGGWNTLS 464
Query: 341 -------SVTQDLVRRLC-AWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYT 390
S TQ V R AWRD +AR DES R+V+ + + LA + P + ++ +
Sbjct: 465 LKWGRALSGTQHTVFRAAHAWRDALARKEDESTRYVMPNHYLFQLAERPPTDMANLLS 522
>gi|426327783|ref|XP_004024690.1| PREDICTED: exosome component 10 [Gorilla gorilla gorilla]
Length = 909
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 274 EQDMFAHPYQYELNHFTPADSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 327
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 328 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 387
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 388 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 447
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 448 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 500
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K + ESY L Q + +T + L AWRD AR
Sbjct: 501 CLKKFIKPLFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 548
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 549 DESYGYVLPNHMMLKIAEELP 569
>gi|327291874|ref|XP_003230645.1| PREDICTED: exosome component 10-like, partial [Anolis carolinensis]
Length = 329
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 170/315 (53%), Gaps = 22/315 (6%)
Query: 71 EKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV---WVETKSQLNELANALSK 127
E+ +HPY+ E+ PE + + R S ++ T +L EL+ L
Sbjct: 34 EQDMFAHPYQYELEHF---SVPEEFLGKPHIQMFRPVSETPCHFISTLDELVELSEKLRT 90
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
FA+D E HS RSFLG T L+QIST ED+++D + L ++ +L F DP + KV H
Sbjct: 91 CKEFALDLEHHSYRSFLGLTCLVQISTRTEDFILDALELRGDLYVLNETFTDPAIIKVLH 150
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+D+DV WLQRDF +Y+VN+FDT +A LS + SL +LL+ YC V NK Q DWR
Sbjct: 151 GADSDVEWLQRDFGLYLVNVFDTHQAARQLSLGRHSLDHLLKLYCNVDANKQYQLADWRI 210
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP EML YA+ D HYLLYI + EL ++GNE P + V + RS +CL+
Sbjct: 211 RPLPEEMLNYARDDTHYLLYIYDRVRTELWERGNE---LP-AQLQVVWQ---RSRDICLK 263
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
Y K I + + L Q + +T + L AWRD MAR DES +
Sbjct: 264 KYLKPI-------FTENSYLELYRKQKKHLNTQQMTA--FKLLFAWRDKMARQEDESTGY 314
Query: 368 VLSDQAIIALANKAP 382
VL + ++ ++ + P
Sbjct: 315 VLPNHMLLKISEELP 329
>gi|341889055|gb|EGT44990.1| hypothetical protein CAEBREN_17638 [Caenorhabditis brenneri]
Length = 864
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 182/381 (47%), Gaps = 70/381 (18%)
Query: 48 KPQHNFKRVLADNSYSPF------KHANKEKSSG-----------------------SHP 78
KPQ + + ADNS +PF KH EK +G HP
Sbjct: 182 KPQKTYS-IGADNSAAPFASKLTVKHHAIEKRTGITLIDDDESGKRDWNRAETETEEEHP 240
Query: 79 YELEITAL-----LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAV 133
Y EI P F +D + V+TK +L L + L+ FAV
Sbjct: 241 YIAEILHFKVPKDQMTPAEPIKFKKLD-----ETTLTMVDTKEKLEALRDVLNNVKEFAV 295
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDV 193
D E + +RS+LG + LIQIST ED+++D + DEI IL FA+P + KV HGSDNDV
Sbjct: 296 DLEHNDMRSYLGLSCLIQISTRDEDFIIDPFPIWDEIGILNDPFANPTILKVLHGSDNDV 355
Query: 194 MWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAE 253
+WLQRDF +++VNLFDT A + L P+ +LAYL+ + V +K Q DWR RPL
Sbjct: 356 LWLQRDFGVHIVNLFDTYVAMKKLKFPKFNLAYLVSRFADVILDKQYQLADWRARPLSKA 415
Query: 254 MLQYAQTDAHYLLYIAKCLVAELKQQGNEN-----SYCPDDKFNFVLEASRRSNTVCLQV 308
M+ YA+ D HYLLY L +L +Q ++ S C D VC++V
Sbjct: 416 MINYAREDTHYLLYCYDMLREQLLKQNEQDLASMYSECTD---------------VCVRV 460
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
Y K + + G + F L + Q V + L WRD +AR DES +FV
Sbjct: 461 YKKPVFNPKGYMTEIKLRFALNSRQDYV----------LTNLYRWRDTVARAEDESPQFV 510
Query: 369 LSDQAIIALANKAPANRTDVY 389
L + ++ ++ P + +Y
Sbjct: 511 LPNTMLLNISESLPRDIGSIY 531
>gi|339717671|pdb|3SAF|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717672|pdb|3SAF|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717673|pdb|3SAG|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
gi|339717674|pdb|3SAG|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
D313n Mutation In The Active Site
Length = 428
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 176/318 (55%), Gaps = 28/318 (8%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 72 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 125
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAV+ E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 126 LLNCQEFAVNLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 185
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 186 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 245
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 246 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 298
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ + K I + E+ + L Q + +T + L AWRD AR DES
Sbjct: 299 CLKKFIKPI--FTDES-----YLELYRKQKKHLNTQQLTA--FQLLFAWRDKTARREDES 349
Query: 365 LRFVLSDQAIIALANKAP 382
+VL + ++ +A + P
Sbjct: 350 YGYVLPNHMMLKIAEELP 367
>gi|444314737|ref|XP_004178026.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
gi|387511065|emb|CCH58507.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 162/287 (56%), Gaps = 21/287 (7%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S +W++TK L +L L K+ AVD E H LRS+ G T L+QIST ++DY+VDTI+L
Sbjct: 237 SAIWIDTKESLADLLMDLRKQSEIAVDLEHHDLRSYYGITCLMQISTREQDYIVDTISLR 296
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
D++ +L F +P + KVFHG+ D++WLQRD +Y+V+LFDT A + L + SLAYL
Sbjct: 297 DDLIVLNEIFTNPNITKVFHGASMDIIWLQRDLGLYIVSLFDTFHASKALGLARHSLAYL 356
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG------N 281
LE Y T+K Q DWR+RPL ML YA++D H+LL I L L +Q +
Sbjct: 357 LENYASFKTSKKYQLADWRRRPLTNNMLAYARSDTHFLLNIFDQLRNTLIKQNKLAGVLH 416
Query: 282 ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISS 341
E+ +F ++ + TV L IE EA S+ + +I
Sbjct: 417 ESRNVAKRRFEYL----KFRPTVPLPNLYTLIEK---EAPWKSLLIQY--------NIQD 461
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ LV++L WRD++AR DES R+++ Q +I+L + P + + V
Sbjct: 462 EKEILVQKLWEWRDMIARRDDESPRYIMPTQVLISLISYTPTDSSGV 508
>gi|67970274|dbj|BAE01480.1| unnamed protein product [Macaca fascicularis]
Length = 673
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++ + P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPPDSVFQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLTA--FQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|403289992|ref|XP_003936119.1| PREDICTED: exosome component 10 [Saimiri boliviensis boliviensis]
Length = 884
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + ++ ++ + +L EL
Sbjct: 248 EQDMFAHPYQYELNHFTPPDSVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 301
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 302 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 361
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 362 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLAD 421
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++ N + V + RS +
Sbjct: 422 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERSNGQPV----QLQVVWQ---RSRDI 474
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 475 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 522
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 523 DESYGYVLPNHMMLKIAEELP 543
>gi|417405124|gb|JAA49287.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6 [Desmodus rotundus]
Length = 888
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V R +V + +L EL
Sbjct: 250 EQDVFAHPYQYELDHFTPPDSVLQKPQPQL-YRPVGETPCR-----FVSSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL P + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFVIDTLELRSDMYILNESLTHPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+DV WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDVEWLQKDFGLYVVNMFDTHQAACLLNLGRHSLDHLLKLYCDVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFKLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|340380967|ref|XP_003388993.1| PREDICTED: exosome component 10-like [Amphimedon queenslandica]
Length = 724
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 180/370 (48%), Gaps = 50/370 (13%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYEL---------EITALLENPRP----- 92
P+PQ FK ++ DNS PF +EK + P + AL+EN R
Sbjct: 136 PRPQSQFKDMI-DNSEGPFVPKLREKPNAMKPLPTVYSQLKVPCTLNALIENARKWAELP 194
Query: 93 -------EFDFSNVDLDLQRSD-------------SFVWVETKSQLNELANALSKEFFFA 132
E++ +N ++ ++ ++V + QL N L A
Sbjct: 195 ERLTHPYEYEINNFEVLESQTQIKEPQVYKSLEDTPLIFVNDEGQLLSFINELKGVTEIA 254
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDND 192
+D E HS RSF GF L+Q+ST DY++DT++L + +L F +P + KV HG+D D
Sbjct: 255 IDLEAHSYRSFQGFVCLMQVSTRTTDYIIDTLSLRPHLHLLNEVFTNPNIIKVMHGADWD 314
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
+ WLQRDF +Y+VNLFDT +AC L P+ SLA+LL CGV NK Q DWR RPLP
Sbjct: 315 IPWLQRDFGVYIVNLFDTGQACRTLGLPRYSLAFLLSYCCGVTANKQYQLADWRIRPLPE 374
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE 312
+M++YA+ D HYLLY+ L EL ++ N S N + + S + L+VY K
Sbjct: 375 DMIKYAREDTHYLLYVYDRLRNELIRRSNSQS-------NLINAVLKNSKEISLKVYKK- 426
Query: 313 IESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
A + + L + ++S ++ L WR +AR DES +VL +
Sbjct: 427 -------PAINDESYLKLCKKFNKRNLSHKQLYALKCLYQWRFNVARREDESPGYVLPNH 479
Query: 373 AIIALANKAP 382
+ L P
Sbjct: 480 MLFQLCEILP 489
>gi|68490644|ref|XP_710869.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432124|gb|EAK91626.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 786
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 170/320 (53%), Gaps = 36/320 (11%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDLQRSDSF----------VWVETKSQLNELANAL 125
+ PYE EI P P D L +SD+ +WV+T +L ++ L
Sbjct: 199 AQPYEYEID---NQPYP-------DAILAKSDAIPPKDWSTTKAIWVDTVEELQKMVQEL 248
Query: 126 SKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKV 185
K AVD E H RS+ G L+QIS ++D+++DT+AL D++++L FADP + KV
Sbjct: 249 KKSTEIAVDLEHHDYRSYYGIVCLMQISNREQDWIIDTLALRDDLTVLNEVFADPDIVKV 308
Query: 186 FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDW 245
FHG+ D++WLQRD +YVV+LFDT A L P+ SLAYLLE Y T+K Q DW
Sbjct: 309 FHGAFMDIIWLQRDLGLYVVSLFDTFHASRALGFPRFSLAYLLEVYAHFKTSKQYQLADW 368
Query: 246 RQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVC 305
R RPL ML YA++D H+LL+I L +N +K + VL SR+
Sbjct: 369 RIRPLSPPMLAYARSDTHFLLFIYDQL---------KNKLIDAEKLSQVLYDSRQVAKRR 419
Query: 306 LQVYTK---EIESYPGEAAASSIFFRLLNGQGGVSS---ISSVTQDLVRRLCAWRDLMAR 359
+ YTK ++ + + F G + S + + +V L WRDLMA+
Sbjct: 420 FE-YTKYRPMANTFSNKVTCPVMAFNPKEPWGSIVSQYNVPHFKRPVVEVLYKWRDLMAK 478
Query: 360 VHDESLRFVLSDQAIIALAN 379
DES+R+++ +Q +++LAN
Sbjct: 479 KQDESVRYIMPNQLLVSLAN 498
>gi|68490669|ref|XP_710857.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432110|gb|EAK91613.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 785
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 170/320 (53%), Gaps = 36/320 (11%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDLQRSDSF----------VWVETKSQLNELANAL 125
+ PYE EI P P D L +SD+ +WV+T +L ++ L
Sbjct: 199 AQPYEYEID---NQPYP-------DAILAKSDAIPPKDWSTTKAIWVDTVEELQKMVQEL 248
Query: 126 SKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKV 185
K AVD E H RS+ G L+QIS ++D+++DT+AL D++++L FADP + KV
Sbjct: 249 KKSTEIAVDLEHHDYRSYYGIVCLMQISNREQDWIIDTLALRDDLTVLNEVFADPDIVKV 308
Query: 186 FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDW 245
FHG+ D++WLQRD +YVV+LFDT A L P+ SLAYLLE Y T+K Q DW
Sbjct: 309 FHGAFMDIIWLQRDLGLYVVSLFDTFHASRALGFPRFSLAYLLEVYAHFKTSKQYQLADW 368
Query: 246 RQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVC 305
R RPL ML YA++D H+LL+I L +N +K + VL SR+
Sbjct: 369 RIRPLSPPMLAYARSDTHFLLFIYDQL---------KNKLIDAEKLSQVLYDSRQVAKRR 419
Query: 306 LQVYTK---EIESYPGEAAASSIFFRLLNGQGGVSS---ISSVTQDLVRRLCAWRDLMAR 359
+ YTK ++ + + F G + S + + +V L WRDLMA+
Sbjct: 420 FE-YTKYRPMANTFSNKVTCPVMAFNPKEPWGSIVSQYNVPHFKRPVVEVLYKWRDLMAK 478
Query: 360 VHDESLRFVLSDQAIIALAN 379
DES+R+++ +Q +++LAN
Sbjct: 479 KQDESVRYIMPNQLLVSLAN 498
>gi|353243741|emb|CCA75245.1| related to nucleolar 100K polymyositis-scleroderma protein
[Piriformospora indica DSM 11827]
Length = 847
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 203/411 (49%), Gaps = 50/411 (12%)
Query: 17 AAISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEK---- 72
A + ++++ + + P + + KPQ F + +++ ++H ++K
Sbjct: 135 ARADVPVVKKEKSKPDTTRLPANVLHANNLVKPQTRFIEPVNNSNDLVWRHTLQQKWHAA 194
Query: 73 -------SSGSHPYELEITALLENP-----RPEFDFSNVDLDLQRSDSFVWVETKSQLNE 120
S +HPY EIT+L P RP + D F +VE+ + L+
Sbjct: 195 QIGSSRPPSSAHPYFKEITSLSHPPSMFLSRPPIPPKSFD-----DTPFTFVESLNGLHS 249
Query: 121 LANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA--LHDEISILQPFFA 178
L + L + A+D E HS RS+ GF L+Q+S ++D++VD + + + IL F
Sbjct: 250 LLDQLKQSEEIAIDLEYHSYRSYYGFVCLMQVSNRQQDWVVDCLVPEIRANLEILNEVFT 309
Query: 179 DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 238
DP + KV HG+++D++WLQ +FH+Y+VNLFDT A L P+ SLA+LL YC +K
Sbjct: 310 DPNIVKVLHGAESDIVWLQENFHLYIVNLFDTFHASRALELPRHSLAFLLSAYCDFTADK 369
Query: 239 FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP--------DDK 290
Q DWR RPLPAEML YA++D H+LL+I L L ++G S P D +
Sbjct: 370 RYQLADWRIRPLPAEMLHYARSDTHFLLFIYDQLREALLEKGKNPSTPPAEDAPPLSDPQ 429
Query: 291 FNFVLEASRRSNTVCLQVYTKE-IESYPGEAAASSIFFRLLNGQGGVSS--------ISS 341
++ S L+ + +E ++ G + G G+ +
Sbjct: 430 LRYIRRVLSNSAQTSLREFVRERYDAVEGTG---------MRGWAGLLKKWNRRSLLVPG 480
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK-APANRTDVYTT 391
V +++ + AWRD +AR DES FV+S+Q +++L K P N T ++ +
Sbjct: 481 VERNIFLAVHAWRDRVAREEDESPVFVISNQLLLSLMEKPVPVNLTALFAS 531
>gi|452823689|gb|EME30697.1| exosome complex exonuclease RRP6 [Galdieria sulphuraria]
Length = 736
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 158/282 (56%), Gaps = 19/282 (6%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+V + S L ++ L KE AVD E HS RSF GF L+Q ST +ED++VD I L
Sbjct: 222 TFVNSLSSLEDMITKLEKEKEIAVDIENHSYRSFQGFICLLQFSTRQEDFVVDAIELRGH 281
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+ +L + + KV HG+D+DV WLQRDF +Y+V++FDT +A L P SL+YLL+
Sbjct: 282 LKMLSKILENGNILKVLHGADSDVQWLQRDFGLYIVHMFDTGQASRQLKFPFLSLSYLLK 341
Query: 230 TYCGV---ATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
YC + T K+ Q DWR RPLP +M YA+ D HYLLYI L EL+Q N N+
Sbjct: 342 RYCNIDNSKTKKYYQLADWRIRPLPEDMFSYARQDTHYLLYIYDRLCEELRQSSNCNN-- 399
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
N + A R S V + +Y K + P E SI R +++
Sbjct: 400 -----NLLTCAYRASIQVSMLIYEKP-QMNPLE--YQSILSRRKLHFDEKQTLA------ 445
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+R LC WRD +AR+ DESL +VL ++ +I +A + P + +++
Sbjct: 446 LRTLCRWRDEIARIEDESLVYVLPEKCMIEIAKRIPQSESEL 487
>gi|296206702|ref|XP_002750328.1| PREDICTED: exosome component 10 isoform 2 [Callithrix jacchus]
Length = 885
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPPDSVLQKPQPQL-YRPVE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL +P + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRMEDFIIDTLELRSDMYILNESLTNPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL +GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWDRGNSQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q +++ + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQK--KHLNTQQLAAFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|148237165|ref|NP_001084822.1| exosome component 10 [Xenopus laevis]
gi|47124776|gb|AAH70757.1| MGC83774 protein [Xenopus laevis]
Length = 883
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 144/255 (56%), Gaps = 22/255 (8%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVD E HS RSFLG T L+QIST EDY++D + L + IL F +P + KVFHG+D
Sbjct: 306 FAVDLEHHSYRSFLGLTCLMQISTRTEDYIIDVLELRSNLYILNESFTNPSIIKVFHGAD 365
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQ+DF +Y+VN+FDT +A +L+ + SL +LL YC V ++K Q DWR RPL
Sbjct: 366 SDIEWLQKDFGLYIVNMFDTHQAARILNLGRHSLDHLLRLYCNVESDKRYQLADWRIRPL 425
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EML+YA+ D HYLLYI + L N N + +RS +CL+ +T
Sbjct: 426 PEEMLEYARVDTHYLLYIYDKMRIALLDAANGQP-------NLLQLVWQRSKDICLKRFT 478
Query: 311 KEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
K I ESY L Q + +T R L AWRD +AR DES +
Sbjct: 479 KLIFTEESY----------LDLYQKQKKHLNTQQLTA--FRLLFAWRDKIARREDESTGY 526
Query: 368 VLSDQAIIALANKAP 382
VL + ++ +A + P
Sbjct: 527 VLPNHMLMKIAEELP 541
>gi|296206700|ref|XP_002750327.1| PREDICTED: exosome component 10 isoform 1 [Callithrix jacchus]
Length = 860
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V+ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPPDSVLQKPQPQL-YRPVE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL +P + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRMEDFIIDTLELRSDMYILNESLTNPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL +GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWDRGNSQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q +++ + L AWRD AR
Sbjct: 477 CLKKFIKPIFTDESY----------LELYRKQK--KHLNTQQLAAFQLLFAWRDKTARRE 524
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 525 DESYGYVLPNHMMLKIAEELP 545
>gi|291414300|ref|XP_002723398.1| PREDICTED: exosome component 10 [Oryctolagus cuniculus]
Length = 886
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 175/321 (54%), Gaps = 34/321 (10%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ + V ++ + +L EL
Sbjct: 247 EQDMFAHPYQYELDHFSPPDSVLQKPQPQL-YRPV-----HETPCHFISSLDKLVELNEK 300
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+Q+ST ED+++DT+ L E+ +L +P + K
Sbjct: 301 LLNCQEFAVDLEHHSYRSFLGLTCLMQVSTRTEDFIIDTLELRSEMYLLNESLTNPTIVK 360
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V ++K Q D
Sbjct: 361 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVDSDKQYQLAD 420
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + EL ++GNE + V + RS +
Sbjct: 421 WRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNEQP----TQLQVVWQ---RSRDL 473
Query: 305 CLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
CL+ + K I ESY L Q + +T + L AWRD AR
Sbjct: 474 CLKKFIKPIFTDESY----------LELYRKQKKHLNTQQLT--AFQLLFAWRDKTARRE 521
Query: 362 DESLRFVLSDQAIIALANKAP 382
DES +VL + ++ +A + P
Sbjct: 522 DESYGYVLPNHMMLKIAEELP 542
>gi|356514039|ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 877
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 182/350 (52%), Gaps = 37/350 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFSNVDLDL 103
+PQ + ++ +N+ PF+H ++S HP LE ++L DF VD +L
Sbjct: 189 RPQDEYS-IVVNNANMPFEHVWLQRSDDGLRFIHP--LEKLSVL-------DF--VDTNL 236
Query: 104 Q----------RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIS 153
+ S F V+ L EL L FAVD E + RSF G T L+QIS
Sbjct: 237 EDVVPVKPPSIESTPFKLVQEVKDLKELVAKLRSVNEFAVDLEHNQYRSFQGLTCLMQIS 296
Query: 154 TEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
T ED++VDT+ L I L+ F DP KV HG+D D++WLQRDF IY+ NLFDT +
Sbjct: 297 TRTEDFVVDTLKLRIHIGPYLREIFKDPAKRKVMHGADRDIVWLQRDFGIYICNLFDTHQ 356
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A ++L+ + SL ++L +C V NK Q DWR RPLP EML+YA+ D HYLLYI +
Sbjct: 357 ASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPNEMLRYAREDTHYLLYIYDLM 416
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
L E+ V E +RS VC+Q+Y KE + + +
Sbjct: 417 RIRLFALSKESESSESSDTPPV-EVYKRSYDVCMQLYEKEF-------LTENSYLHIYGL 468
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
QG + + +V LC WRD++AR DES +VL +++++ +A + P
Sbjct: 469 QGAGFNAQQLA--IVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMP 516
>gi|389640871|ref|XP_003718068.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
gi|351640621|gb|EHA48484.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
Length = 828
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 179/338 (52%), Gaps = 23/338 (6%)
Query: 59 DNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVD----LDLQRSDSFVWVET 114
D S + F + + E + HPYE EI L++ PE + D + +S S +V+T
Sbjct: 182 DKSLATFDNEDAE-TQYKHPYETEI---LQSRHPESVYQKRDPIPYTPIAKS-SPTYVDT 236
Query: 115 KSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISIL 173
+ E+ L + AVD E H R++ G +L+QIST ++D++VDT+ ++ IL
Sbjct: 237 YEGVLEMLEDLKQAKEIAVDLEHHDFRTYHGLLSLMQISTREKDWIVDTLKPWRQQLEIL 296
Query: 174 QPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 233
FADP + KVFHG+ D++WLQRD +YVV LFDT A E L P KSLAYLL+ +
Sbjct: 297 NEVFADPSIVKVFHGAFMDIVWLQRDLGLYVVGLFDTFHAAEALMYPSKSLAYLLKKFVD 356
Query: 234 VATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNF 293
+K Q DWR RPLP EML YA++D HYLLY+ + EL +Q S D +
Sbjct: 357 FEADKRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMRNELLRQ----SVSGDPHRDL 412
Query: 294 VLEASRRSNTVCLQ---VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
+ +RS LQ YT + E+ G ++ RL N + S + R L
Sbjct: 413 LERTLQRSKDTALQRYEAYTIDGETGRGSRGWFNLIHRLPN------TFSREQFSVYRAL 466
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
WRD +AR DES F++S+Q ++ +A P D+
Sbjct: 467 HKWRDDVARREDESPMFLMSNQLLVDIARAMPETANDL 504
>gi|17531757|ref|NP_496283.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|3874231|emb|CAA90108.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|31747255|gb|AAP57299.1| cell death-related nuclease 3 [Caenorhabditis elegans]
Length = 876
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 184/374 (49%), Gaps = 56/374 (14%)
Query: 48 KPQHNFKRVLADNSYSPF------KHANKEKSSG-----------------------SHP 78
KPQ + + +DNS +PF KH EK +G HP
Sbjct: 189 KPQKTYN-ISSDNSQAPFSSKLTVKHHAIEKRTGIVLHDDDESGRRDWISAETETEEEHP 247
Query: 79 YELEITALLENPRPEFDFSNVD---LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDT 135
Y I +L PE + + + ++TK +L L L+ FAVD
Sbjct: 248 Y---IAEILHFKVPEAQLKSAECLKFTALKDTPLTMIDTKEKLEALTKTLNSVKEFAVDL 304
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
E H +RS+LG T LIQIST ED+++D + D + +L FA+P + KVFHGSD+DV+W
Sbjct: 305 EHHQMRSYLGLTCLIQISTRDEDFIIDPFPIWDHVGMLNEPFANPRILKVFHGSDSDVLW 364
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD+ ++VVNLFDT A + L P+ SLAYL + V +K Q DWR RPL M+
Sbjct: 365 LQRDYGVHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMI 424
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA+ D HYLLY L +L +Q ++ + S+ +C++VY K +
Sbjct: 425 NYAREDTHYLLYSYDMLREQLLKQDTKD----------LANVYSESSDLCIKVYKKPV-- 472
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
+ + + I FR ++++ + L WRD++AR DES FVL + ++
Sbjct: 473 FNPKGYLTEIKFRF--------TLNTRQDYALTHLFKWRDVVARAEDESPHFVLPNHMML 524
Query: 376 ALANKAPANRTDVY 389
+L+ P + +Y
Sbjct: 525 SLSETLPRDVGGIY 538
>gi|401623674|gb|EJS41765.1| rrp6p [Saccharomyces arboricola H-6]
Length = 733
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 182/376 (48%), Gaps = 51/376 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKTPIDNSETHPFIPLLKEKPNALKPLSDCLQLIEAEENNPSHYPHPYEYEIDHQ 190
Query: 87 LENPRPEFDFSNVDLDLQRSDSF-----VWVETKSQLNELANALSKEFFFAVDTEQHSLR 141
NP D + ++ S S+ +WV+T+++L + N L AVD E H R
Sbjct: 191 EYNP----DILQIKSEIP-SKSWDHSEPIWVDTETKLESMLNDLKNVHEIAVDLEHHDYR 245
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
S+ G L+Q+ST K+DYLVDTI L + + IL F DP + KVFHG+ D++WLQRD
Sbjct: 246 SYYGIVCLMQVSTRKKDYLVDTIELRENLHILNEVFTDPSIIKVFHGAFMDIIWLQRDLG 305
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+Y+V+LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+ D
Sbjct: 306 LYIVSLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARAD 365
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
H+LL I L N +K VL SR + Y+K P
Sbjct: 366 THFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSKV 415
Query: 322 ASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIAL 377
S I +R+L Q ++ V LV+ L WRD++AR DES RFV+ +Q + AL
Sbjct: 416 YSPIEKENPWRVLMYQYNIAPEREV---LVKNLYQWRDVIARRDDESPRFVMPNQLLAAL 472
Query: 378 ANKAPANRTDVYTTIA 393
P TDV ++
Sbjct: 473 VAYTP---TDVIGVVS 485
>gi|339717675|pdb|3SAH|A Chain A, Crystal Structure Of The Human Rrp6 Catalytic Domain With
Y436a Mutation In The Catalytic Site
gi|339717676|pdb|3SAH|B Chain B, Crystal Structure Of The Human Rrp6 Catalytic Domain With
Y436a Mutation In The Catalytic Site
Length = 428
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 28/318 (8%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 72 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 125
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 126 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 185
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 186 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 245
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML A+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 246 WRIRPLPEEMLSAARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 298
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ + K I + E+ + L Q + +T + L AWRD AR DES
Sbjct: 299 CLKKFIKPI--FTDES-----YLELYRKQKKHLNTQQLTA--FQLLFAWRDKTARREDES 349
Query: 365 LRFVLSDQAIIALANKAP 382
+VL + ++ +A + P
Sbjct: 350 YGYVLPNHMMLKIAEELP 367
>gi|410899603|ref|XP_003963286.1| PREDICTED: exosome component 10-like [Takifugu rubripes]
Length = 885
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 172/317 (54%), Gaps = 36/317 (11%)
Query: 76 SHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVW-VETKSQLNELANALSKE 128
+HPY+ E+ +LL P P+ + V+ + SF+ +E LNE LS+
Sbjct: 252 AHPYQYELDHLTIPESLLSKPEPQL-YKPVE---ETKCSFITTLEDLVALNEKLCQLSE- 306
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHG 188
FAVD E HS RSFLG T L+QIST +ED+++DT+ + E+ IL F DP + KVFHG
Sbjct: 307 --FAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLEVRSEMYILNEAFTDPAIVKVFHG 364
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+D+D+ WLQRDF +YVV LFDT +A L+ + SL +LL +C VA++K Q DWR R
Sbjct: 365 ADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNVASDKRYQLADWRIR 424
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PLP EM+QYA++D HYLLYI + A+L + + + RS + L+
Sbjct: 425 PLPEEMVQYARSDTHYLLYIYDRVRAQLLDFNHGQA-------GLLKSVWDRSRDISLKK 477
Query: 309 YTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
Y K I ESY L Q S ++ R L AWRD +AR DES
Sbjct: 478 YMKPIFTEESY----------LELQRKQK--KSFNTQQLAAFRLLFAWRDKLARQEDEST 525
Query: 366 RFVLSDQAIIALANKAP 382
+ L +I ++ + P
Sbjct: 526 GYALPTHMMIKISEELP 542
>gi|213510932|ref|NP_001133834.1| Exosome component 10 [Salmo salar]
gi|209155512|gb|ACI33988.1| Exosome component 10 [Salmo salar]
Length = 885
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 167/311 (53%), Gaps = 24/311 (7%)
Query: 76 SHPYELEIT--ALLEN--PRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
+HPY+ E+ AL EN +PE + + S +++ L + L+K F
Sbjct: 254 AHPYQYELDHLALPENLLSKPEPQMYKPLAETKCS----FIDNLEDLVAVNEKLTKTSEF 309
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
AVD E HS RSFLG T L+QIST ED+++DT+ L E+ IL F DP + KVFHG+D+
Sbjct: 310 AVDLEHHSYRSFLGITCLMQISTRDEDFIIDTLELRSELYILNEAFTDPAIVKVFHGADS 369
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ WLQ+D +Y+VN+FDT +A L+ + SL +LL+ +C V ++K Q DWR RPLP
Sbjct: 370 DIEWLQKDLGLYIVNMFDTHQASRTLNLGRHSLDHLLKLFCNVDSDKRYQLADWRIRPLP 429
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK 311
EM QYA+ D HYLLY+ L +L + GN + +S + L+ Y K
Sbjct: 430 DEMFQYARADTHYLLYVYDRLRVDLWEVGNGQP-------ALLQMVWHKSKDISLKKYMK 482
Query: 312 EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSD 371
+ + LL Q V + +T R L WRD +AR DES +VL +
Sbjct: 483 PL-------FTDDSYMDLLRKQKKVFNTQQLTA--FRLLYGWRDKLARQEDESTGYVLPN 533
Query: 372 QAIIALANKAP 382
+I +++ P
Sbjct: 534 HMMIKISDILP 544
>gi|146421793|ref|XP_001486840.1| hypothetical protein PGUG_00217 [Meyerozyma guilliermondii ATCC
6260]
Length = 755
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 196/376 (52%), Gaps = 68/376 (18%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HANK--EKS----SGS------------HPYELE 82
KPQ FK + ++ +PFK HA K E+S SG+ HPYE E
Sbjct: 139 KPQQFFKTKIDNSELAPFKPKLTSKPHALKSFEESCNLRSGADTEFGKDPDYFPHPYEYE 198
Query: 83 ITAL---------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAV 133
I L LE +P+ D++ S S +WVET+S L+++ + LS + AV
Sbjct: 199 IDTLEYPELVLEILEPKKPK-DWT--------STSAIWVETESDLSQMVSDLSSQTEIAV 249
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDV 193
D E H RS+LG L+QIS+ ++D+++DT+ L D + +L FA+P + KVFHG+ D+
Sbjct: 250 DLEHHDYRSYLGIVCLMQISSREKDWIIDTLKLRDSLVVLNEIFANPNIVKVFHGAFMDI 309
Query: 194 MWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAE 253
+WLQRD +YVV+LFDT A + L P+ SLAYLLE Y T+K Q DWR RPL
Sbjct: 310 IWLQRDLGLYVVSLFDTYHASKKLGLPRFSLAYLLENYANFKTSKKYQLADWRMRPLLGP 369
Query: 254 MLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI 313
ML YA++D H+LLY+ L +L G++ K VL SR QV +
Sbjct: 370 MLSYARSDTHFLLYVYDQLRNQLLSSGSQ-------KMKEVLHESR-------QVAKRRF 415
Query: 314 ESY---PGEAAASSIFFRLL--NGQGGVSSISSV------TQDLVRRLCAWRDLMARVHD 362
E P + S + ++ N + SSI + T+ +V L WRD A+ D
Sbjct: 416 EFTRFRPTLVSGSKVSCPIMAPNAKEPYSSIMNQFNLPNHTRPIVEALYLWRDAKAKECD 475
Query: 363 ESLRFVLSDQAIIALA 378
E +R+V+ +Q ++ +
Sbjct: 476 ELVRYVMPNQLLVNFS 491
>gi|85094529|ref|XP_959900.1| hypothetical protein NCU02256 [Neurospora crassa OR74A]
gi|28921357|gb|EAA30664.1| hypothetical protein NCU02256 [Neurospora crassa OR74A]
gi|40804632|emb|CAF05892.1| related to nucleolar 100K polymyositis-scleroderma protein
[Neurospora crassa]
Length = 822
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 206/431 (47%), Gaps = 68/431 (15%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFK-------HA--------- 68
R Q+R + N +S + KPQ+NF++ + + + P+K HA
Sbjct: 124 RAQKRVKSSNDRLDWSLKRANILKPQNNFEKKVDNFATGPWKPLLSSKPHAKVSLEDSLT 183
Query: 69 ----NKEKSSGSHPYELEITALLENPRPEFDFSN------VDLDLQRSDSFVWVETKSQL 118
+ + HPYE EI P PE + + +D S S +WV+T +
Sbjct: 184 TFVDDDNNTQYKHPYETEIKT---TPYPEHVYKKREPKEYLPID---STSAIWVDTYEGV 237
Query: 119 NELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFF 177
E+ L + A+D E H RS+ G +L+QIST ++D+++DT+ ++ +L F
Sbjct: 238 LEMLEELKQAKEIALDLEHHDFRSYTGLLSLMQISTREKDWVIDTLQPWRHKLEVLNEVF 297
Query: 178 ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATN 237
A+P + KV HG+ DV+WLQRD +YVV LFDT AC VL P +SL YLL + +
Sbjct: 298 ANPNIVKVLHGAFMDVIWLQRDLGLYVVGLFDTYHACAVLGYPGRSLGYLLSKFAEFEAD 357
Query: 238 KFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEA 297
K Q DWR RPLP EM YA++D HYLLYI ++ EL ++ PD + +
Sbjct: 358 KKYQLADWRIRPLPEEMFYYARSDTHYLLYIFDMIINELVERSTPGKPKPD----LLEQV 413
Query: 298 SRRSNTVCLQVY---TKEIESYPGEAAASSIFFR---LLNGQGGVSSISSVTQDLVRRLC 351
RS V LQ Y + +E+ G ++ + L NG+ + + +
Sbjct: 414 LERSKDVALQRYENLSYNVETGQGPRGWYNVLLKSPTLYNGEQFA---------VYKAVH 464
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSP 411
WRD +AR DES F ++ Q + +A P ++ +++ + DS+ L
Sbjct: 465 QWRDNLARREDESPFFFMTQQVLADIARILPTDKKALWSIL---DSNAKGLK-------- 513
Query: 412 SPVVCSHLDDV 422
SHLDD+
Sbjct: 514 -----SHLDDL 519
>gi|242011128|ref|XP_002426307.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510384|gb|EEB13569.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 737
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 164/313 (52%), Gaps = 30/313 (9%)
Query: 77 HPYELEITAL--LEN---PRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
HPYE E+ LE+ +P + ++ F + +++ + L K
Sbjct: 218 HPYEFELNKFQPLESQLLSQPPISYKTLE-----ETPFHLITKPEEIDPMIENLEKCKEI 272
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
A+D E HS RSF GFT L+QIST DY++DTIAL ++ L F +P + KVFHG+D
Sbjct: 273 AIDLEHHSYRSFQGFTCLLQISTRDTDYVIDTIALRSKLEGLNKIFTNPNIVKVFHGADL 332
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D++WLQRD +YVVN+FDT +A ++L+ SLAYL+ +C + K Q DWR RPLP
Sbjct: 333 DILWLQRDLSLYVVNMFDTHQAGKLLNYSSLSLAYLMFHFCKIVAQKHFQMADWRIRPLP 392
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK 311
E+L YA+ D HYLLYI L L ++ NE N + S +CL+ Y K
Sbjct: 393 DELLAYAREDTHYLLYIYDNLRNILIEKSNEQK-------NLLRTVINESTRICLKTYKK 445
Query: 312 EIESYPG--EAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
P E+ SI+ R + + ++RL AWRD AR DESL +VL
Sbjct: 446 -----PNFDESGYMSIYTR------SKKIFDNRQKYALQRLYAWRDSTARELDESLAYVL 494
Query: 370 SDQAIIALANKAP 382
+ ++ ++ P
Sbjct: 495 PNHMMLNISEVLP 507
>gi|395521908|ref|XP_003765056.1| PREDICTED: exosome component 10 [Sarcophilus harrisii]
Length = 992
Score = 192 bits (488), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 166/315 (52%), Gaps = 22/315 (6%)
Query: 71 EKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV---WVETKSQLNELANALSK 127
E+ +HPY+ E+ P+ + + RS +V T +L EL L
Sbjct: 357 EQDMFAHPYQYELDHFTP---PDAVLQKPQIQMYRSVEETPCHFVSTLDELVELNEKLLS 413
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
F +D E HS RSFLG T L+QIST ED+++DT+ L ++ IL F DP + KVFH
Sbjct: 414 CKDFGIDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRCDLYILNESFTDPAIVKVFH 473
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+D D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V TNK Q DWR
Sbjct: 474 GADMDIEWLQKDFGLYVVNMFDTHQAARILNLGRHSLDHLLKLYCNVETNKQYQLADWRI 533
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP EM YA+ D HYLLYI + ++L ++ N + V + RS +CL+
Sbjct: 534 RPLPEEMFNYARHDTHYLLYIYDKMRSDLWERANGQPA----QLQVVWQ---RSKDICLK 586
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+ K I + L Q + +T + L +WRD AR DES +
Sbjct: 587 KFIKPI-------FTEDSYLELYRKQKKHLNTQQLT--AFQLLYSWRDRTARREDESYGY 637
Query: 368 VLSDQAIIALANKAP 382
VL + ++ +A + P
Sbjct: 638 VLPNHMMLKIAEELP 652
>gi|241948847|ref|XP_002417146.1| exosome component 3'-5' exonuclease [Candida dubliniensis CD36]
gi|223640484|emb|CAX44736.1| exosome complex exonuclease RRP6, putative [Candida dubliniensis
CD36]
Length = 776
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 170/318 (53%), Gaps = 32/318 (10%)
Query: 76 SHPYELEIT------ALL--ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
+ PYE EI A+L +P P D+S +WV+T +L+++ L K
Sbjct: 196 AQPYEYEIDNQPYPDAILAKSDPIPPKDWSTT--------KAIWVDTVEELHKMVPELKK 247
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
AVD E H RS+ G L+QIS+ ++D++VDT+ L D++++L FADP + KVFH
Sbjct: 248 STEIAVDLEHHDYRSYYGIVCLMQISSREQDWIVDTLVLRDDLTVLNEVFADPNIVKVFH 307
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +YVV+LFDT A L P+ SLAYLLE Y T+K Q DWR
Sbjct: 308 GAFMDIIWLQRDLGLYVVSLFDTYHASRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRI 367
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL ML YA++D H+LL+I L +N +K VL SR+ +
Sbjct: 368 RPLSPPMLAYARSDTHFLLFIYDQL---------KNKLIDANKLAQVLYDSRQVAKRRFE 418
Query: 308 VYTK---EIESYPGEAAASSIFFRLLNGQGGVSS---ISSVTQDLVRRLCAWRDLMARVH 361
YTK ++ + + F G + S + + +V L WRDLMA+
Sbjct: 419 -YTKYRPMANTFSNKVTCPVMAFNPKEPWGSIVSQYNVPHFKRPVVEVLYKWRDLMAKQQ 477
Query: 362 DESLRFVLSDQAIIALAN 379
DES+R+++ +Q +++L N
Sbjct: 478 DESVRYIMPNQLLVSLVN 495
>gi|254566215|ref|XP_002490218.1| Exonuclease component of the nuclear exosome [Komagataella pastoris
GS115]
gi|238030014|emb|CAY67937.1| Exonuclease component of the nuclear exosome [Komagataella pastoris
GS115]
gi|328350615|emb|CCA37015.1| exosome complex exonuclease RRP6 [Komagataella pastoris CBS 7435]
Length = 717
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 185/351 (52%), Gaps = 38/351 (10%)
Query: 60 NSYSPFKHANK-------EKSSGSHPYELEITA------LLENPRPEFDFSNVDLDLQRS 106
NS PF+ +K +HPYE EI + +LE P + S
Sbjct: 156 NSVVPFEEVHKLVPETDDNPQHHNHPYEFEINSQEYPKWILERREPIVN------QPWES 209
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
+ ++VET+ Q+ ++ + LSK AVD E H LR++ G L+QIST +DY+VDT+ L
Sbjct: 210 TTAIYVETEQQVGDMIDTLSKADVIAVDLEHHDLRTYYGLVCLMQISTRNQDYIVDTLKL 269
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
++ L F DP + KVFHG+ D++WLQRD +YVV+LFDT A ++L P+ SLAY
Sbjct: 270 RFKLQPLNKVFTDPSIVKVFHGAFMDIIWLQRDLGLYVVSLFDTFHASKLLGFPKHSLAY 329
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
LLETY T+K Q DWR RPL +L YA++D H+LLYI L L + G
Sbjct: 330 LLETYAKFKTSKKYQLADWRVRPLTKPLLAYARSDTHFLLYIFDQLNNMLIESG------ 383
Query: 287 PDDKFNFVLEASRRSNTVCLQ--VYTKEIESYPGEAAASSIFFRLLNGQG--GVSSISSV 342
K + VL SR+ V L+ YTK ++P S + R + + +I
Sbjct: 384 ---KLSQVLYDSRQ---VALRRFEYTKFRPNFPTPLVVSPLNDRKEPWKQLLYLYNIPRS 437
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
Q + L WRD +AR DES R+VL +Q + + + +P TDV + ++
Sbjct: 438 RQPVFIALYNWRDEIAREDDESTRYVLPNQLLATITSISP---TDVSSLMS 485
>gi|336273270|ref|XP_003351390.1| hypothetical protein SMAC_03697 [Sordaria macrospora k-hell]
gi|380092911|emb|CCC09664.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 821
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 195/400 (48%), Gaps = 50/400 (12%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFK-------HA--------- 68
R Q+R + N ++S + KPQ+NF+R + + + P+K HA
Sbjct: 124 RAQKRVKSSNDRLEWSLKRANILKPQNNFERKVDNFAAGPWKPLLSSKPHAKVSLEDSLT 183
Query: 69 ----NKEKSSGSHPYELEITALLENPRPEF--------DFSNVDLDLQRSDSFVWVETKS 116
+ + HPYE EI P PE +F +D S S VW++T
Sbjct: 184 TFVDDDNNTQYKHPYETEIKT---TPYPEHVYKKREPKEFLPID-----STSAVWIDTYE 235
Query: 117 QLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQP 175
+ E+ L + A+D E H RS+ G +L+QIST ++D+++DT+ ++ +L
Sbjct: 236 GVLEMLEELKQAKEIALDLEHHDFRSYTGLLSLMQISTREKDWVIDTLQPWRHKLEVLNE 295
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
FADP + KV HG+ D +WLQRD +Y+V LFDT AC VL P +SL YLL +
Sbjct: 296 VFADPKIVKVLHGAFMDAIWLQRDLGLYLVGLFDTYHACAVLGYPGRSLGYLLSKFAEFE 355
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
+K Q DWR RPLP EM YA++D HYLLYI LV EL ++ PD +
Sbjct: 356 ADKKYQLADWRIRPLPEEMFYYARSDTHYLLYIYDMLVNELIERSTPGKPKPD----LLE 411
Query: 296 EASRRSNTVCLQVY---TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCA 352
+ RS V LQ Y + +E+ G ++ + + +S + + +
Sbjct: 412 QVLERSKDVALQRYENPSYNVETGMGPRGWYNVLLK------SPTLYNSEQFAVYKAVHQ 465
Query: 353 WRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
WRD +AR DES F ++ Q + +A P ++ +++ +
Sbjct: 466 WRDNLARREDESPFFFMTQQVLADIARILPTDKKALWSIL 505
>gi|440475179|gb|ELQ43880.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae Y34]
gi|440487108|gb|ELQ66914.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae P131]
Length = 854
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 171/320 (53%), Gaps = 22/320 (6%)
Query: 77 HPYELEITALLENPRPEFDFSNVD----LDLQRSDSFVWVETKSQLNELANALSKEFFFA 132
HPYE EI L++ PE + D + +S S +V+T + E+ L + A
Sbjct: 225 HPYETEI---LQSRHPESVYQKRDPIPYTPIAKS-SPTYVDTYEGVLEMLEDLKQAKEIA 280
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDN 191
VD E H R++ G +L+QIST ++D++VDT+ ++ IL FADP + KVFHG+
Sbjct: 281 VDLEHHDFRTYHGLLSLMQISTREKDWIVDTLKPWRQQLEILNEVFADPSIVKVFHGAFM 340
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D++WLQRD +YVV LFDT A E L P KSLAYLL+ + +K Q DWR RPLP
Sbjct: 341 DIVWLQRDLGLYVVGLFDTFHAAEALMYPSKSLAYLLKKFVDFEADKRYQTADWRIRPLP 400
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ---V 308
EML YA++D HYLLY+ + EL +Q S D + + +RS LQ
Sbjct: 401 EEMLYYARSDTHYLLYVYDMMRNELLRQ----SVSGDPHRDLLERTLQRSKDTALQRYEA 456
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
YT + E+ G ++ RL N + S + R L WRD +AR DES F+
Sbjct: 457 YTIDGETGRGSRGWFNLIHRLPN------TFSREQFSVYRALHKWRDDVARREDESPMFL 510
Query: 369 LSDQAIIALANKAPANRTDV 388
+S+Q ++ +A P D+
Sbjct: 511 MSNQLLVDIARAMPETANDL 530
>gi|403218486|emb|CCK72976.1| hypothetical protein KNAG_0M01230 [Kazachstania naganishii CBS
8797]
Length = 738
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 194/390 (49%), Gaps = 49/390 (12%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYE--LEITALLEN-----PRP-EFDFSNV 99
KPQ +F R + ++ PFK EK + P + L++ EN P P +++ SN
Sbjct: 132 KPQLHFSRPVDNSESQPFKPLLTEKPNALKPLKESLQMVPATENIPSHYPNPYDYEISNQ 191
Query: 100 DL--DLQRS-----------DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
+ D+ + VWV++ L L L K A+D E H RS+ G
Sbjct: 192 EYNNDILETRAPIPSTPWHESEPVWVDSTEGLQSLLKDLKKYKELAIDLEHHDYRSYYGI 251
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+QIST DYLVDTIAL DE+ IL F DP V KVFHG+ D++WLQRD +Y+V+
Sbjct: 252 VCLMQISTRDTDYLVDTIALRDELHILNQVFTDPMVTKVFHGAFMDIIWLQRDLGLYIVS 311
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A + L P+ SLAYLLET T+K Q DWR RPL M YA+ D H+LL
Sbjct: 312 LFDTFHASKALGFPKHSLAYLLETLANFKTSKKYQLADWRIRPLSKPMSVYARADTHFLL 371
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I + N D+K VL SR+ V + + E + + A +F
Sbjct: 372 NIFDQM---------RNQLIKDNKLAGVLGESRK---VAKRRF--EYSKFRPKLAQPDVF 417
Query: 327 --------FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+R L Q V + ++LV+ L WRD +AR DES R+++ +Q +I+L+
Sbjct: 418 TPIEKESPWRTLMFQYNV---TPEKEELVKALYEWRDTIARRDDESPRYIMPNQLLISLS 474
Query: 379 NKAPANRTDVYTTIAQADSDVDCLNLSSSL 408
P TD + ++ DC+ +S +
Sbjct: 475 AYTP---TDPVSLVSVNSYVTDCVRSNSKV 501
>gi|255712831|ref|XP_002552698.1| KLTH0C11066p [Lachancea thermotolerans]
gi|238934077|emb|CAR22260.1| KLTH0C11066p [Lachancea thermotolerans CBS 6340]
Length = 735
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 195/373 (52%), Gaps = 46/373 (12%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG--SHPYELEITALLEN-----PRP-EFDFSNV 99
KPQ FKR + ++ PFK K+K S L +TA E+ P+P E++ +
Sbjct: 133 KPQLLFKRPIDNSESHPFKPLLKKKPHALRSLDESLRLTAEQEDVPAHYPQPYEYEIDHQ 192
Query: 100 DLD---LQRSD---SFVWVETKSQLNELANALSKEFF-------FAVDTEQHSLRSFLGF 146
+ + LQ S+ S W ET+++ + +AL A+D E H R++ G
Sbjct: 193 EYNESVLQISEPVPSLPWDETEAEWVDNTDALKLMLNELLLANEIAIDLEHHDYRTYYGI 252
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
T L+QIST ++D+L+DTIAL D++ IL F DP + KV HG+ D++WLQRD +Y+V+
Sbjct: 253 TCLMQISTREKDWLIDTIALRDDLWILNEVFTDPKITKVLHGAFMDIIWLQRDLGLYIVS 312
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A +L P+ SLAYLLE Y T+K Q DWR RPLP + YA+ D H+LL
Sbjct: 313 LFDTYHASRLLGSPKHSLAYLLERYAHFKTSKKYQLSDWRVRPLPKALKAYARADTHFLL 372
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I + NS +K + VL SR V + + E ++ + S +F
Sbjct: 373 NIYDNM---------RNSLIEQNKLSQVLHDSR---NVAKRRF--EFTTFRPKIVTSHVF 418
Query: 327 --------FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+R L Q + S+ LVRRL WRD++AR DES R+V+ +Q +++LA
Sbjct: 419 SPIEREDPWRTLMFQYNIPQSKSL---LVRRLYEWRDMVARRDDESPRYVIPNQLLVSLA 475
Query: 379 NKAPANRTDVYTT 391
AP + T
Sbjct: 476 VNAPTTPALIMAT 488
>gi|358339908|dbj|GAA47879.1| exosome complex exonuclease RRP6, partial [Clonorchis sinensis]
Length = 1125
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 157/282 (55%), Gaps = 20/282 (7%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ +V+T S L+ +S AVD E HS RS+LG T L+Q+ST DY++D +AL
Sbjct: 595 NYKFVDTLSALDAALAEISLHKEIAVDLEHHSHRSYLGITCLVQLSTRTTDYILDALALR 654
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
D + L F DP V KVFHGSD D+MWLQRDF IYVVNLFDT A L + SL++L
Sbjct: 655 DHLHKLNVIFTDPDVVKVFHGSDLDLMWLQRDFSIYVVNLFDTGLAARALQLGRFSLSFL 714
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
L Y V NK Q DWR RPLP E+++YA+TD HYLL+++ + EL+ +G
Sbjct: 715 LLRYANVRANKKYQLADWRIRPLPDELIEYARTDTHYLLHVSAVMCQELQDRG------- 767
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ VLE R+ +CL+ YTK A + + L Q +S + +
Sbjct: 768 --LLDVVLEGGRQ---LCLKRYTK--------PAFDPLGYLSLYRQAAGTSFNHRQLYAL 814
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
+L A RD +AR DES+ +VL + + +A P + ++
Sbjct: 815 EQLYALRDSIARREDESVHYVLPNHMLKTIAEVLPRESSGLF 856
>gi|242767043|ref|XP_002341292.1| exosome component 3'-5' exonuclease [Talaromyces stipitatus ATCC
10500]
gi|218724488|gb|EED23905.1| exosome complex exonuclease Rrp6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 771
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 192/392 (48%), Gaps = 34/392 (8%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEI 83
R+ R++ + P Y S+ PKPQ F+ ++ SPF+ K K P E +
Sbjct: 123 REASSRQQEKKFPTIYDYGPSKIPKPQLLFRTAPNNHDTSPFRPLLKSKPHAIVPLEQSL 182
Query: 84 TALLENPRPEFDFSN---------------------VDLDLQRSDSFVWVETKSQLNELA 122
+ + +P F + N V+ + VWV+T + E+
Sbjct: 183 QLVGTDKKPAF-YPNPYEKEIRESTYPKSTYVVAPPVEFGPVETTQAVWVDTPEGVAEMV 241
Query: 123 NALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPG 181
L K AVD E H + ++ G +L+QIST +D++VDT+ +++ L F DP
Sbjct: 242 EELKKAKEIAVDLEHHDVHTYYGLVSLMQISTRDKDWVVDTLQPWREDLQRLNEVFTDPN 301
Query: 182 VCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQ 241
+ KVFHGS D++WLQRD +YVV+LFDT A L P++SL +LLE Y +K Q
Sbjct: 302 ILKVFHGSTMDIVWLQRDLGLYVVSLFDTYHAAVALGFPKRSLKFLLEKYAHYEADKKYQ 361
Query: 242 REDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRS 301
DWR RPL EML+YA+ D HYLLYI CL EL E S ++ ++VLE RS
Sbjct: 362 MADWRLRPLTDEMLKYARADTHYLLYIYDCLRNELL----EKSTPKRNQIDYVLE---RS 414
Query: 302 NTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
T LQ Y + + G A ++ LL+ G + + + + WRD +AR
Sbjct: 415 KTEALQRYERPVYDTLGGQGAGG-WYDLLSRNSGQFTKEQFA--VFKAVHEWRDRVAREE 471
Query: 362 DESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
DE L+ V + +A P ++ ++ T++
Sbjct: 472 DEGLQCVFPRHVLFRVAVAMPVDKHTLFKTLS 503
>gi|405119146|gb|AFR93919.1| PM-scl autoantigen [Cryptococcus neoformans var. grubii H99]
Length = 954
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 172/322 (53%), Gaps = 22/322 (6%)
Query: 70 KEKSSGSHPYELEITALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
KE + +HPY E T L P F D V F +V+T +L+ + L +
Sbjct: 208 KEIRARTHPYYYE-TKHLPYPTSLFIDSKPVPPQSFNETPFEFVDTPEKLHRMVEKLKEA 266
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI--SILQPFFADPGVCKVF 186
AVD E H +RS+ GFT LIQIST + D++VDT+AL EI F DP + KVF
Sbjct: 267 KEIAVDLEHHDMRSYAGFTCLIQISTRESDWVVDTLALRKEIQQDKFGDVFTDPTIVKVF 326
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWR 246
HG+D+D++WLQRDF I+VVNLFDT AC VL PQ+SL+ LL+ YC +K QR DWR
Sbjct: 327 HGADSDIIWLQRDFEIFVVNLFDTYSACVVLEMPQRSLSALLQHYCSFEADKRYQRADWR 386
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASR------- 299
RPLP ML YA++D H+LL+I L L + + S P VL+++R
Sbjct: 387 IRPLPDGMLYYARSDTHFLLFIYDNLRNALLHKSSRPS-SPATCGTIVLDSARPNPQEAM 445
Query: 300 -----RSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV--SSISSVTQDLVRRLCA 352
RS L++Y E +SY E S + L G+ + I + + R L
Sbjct: 446 REVLERSADTALKMY--ERDSYDIETGRGSGGW-LAAGKKWLPKGEIEQESGWVWRHLHD 502
Query: 353 WRDLMARVHDESLRFVLSDQAI 374
WRD +AR DES +V+ + +
Sbjct: 503 WRDRVAREMDESPFYVMPNNML 524
>gi|255075175|ref|XP_002501262.1| predicted protein [Micromonas sp. RCC299]
gi|226516526|gb|ACO62520.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 152/277 (54%), Gaps = 12/277 (4%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V+V+T L ++ L K AVD E HS RSF GFT +IQ+ST + D++VD + L
Sbjct: 36 VFVDTPEALEDMVAHLDKSNEMAVDLEHHSYRSFQGFTCVIQVSTRRMDFVVDALELRGL 95
Query: 170 I-SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
I L P ADP V KVFHG+D DV WLQRDF IYVV +FDT +A VL P K LAYLL
Sbjct: 96 IRDALGPVMADPRVMKVFHGADMDVQWLQRDFGIYVVGMFDTGQAARVLELPSKGLAYLL 155
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ YC V +K Q DWR RPL EM+ YA+ D H+LLY+ L +L G + P
Sbjct: 156 DHYCSVKADKRFQLADWRVRPLSEEMISYARGDTHHLLYVYDRLRQQLDAVGRGDGSKP- 214
Query: 289 DKFNFVLEAS-RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
F ++ + RS VC +Y K + ++P A +R N G + + +
Sbjct: 215 --FRDLIRTTLDRSRDVCATLYEKPV-THPLTYHAD---YR-KNRDAGDLDLPRLA--VY 265
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L WRD R DES+ +V+ ++ LA +AP N
Sbjct: 266 AALHGWRDERCRAEDESIGYVMPRALMLRLAREAPTN 302
>gi|383849711|ref|XP_003700481.1| PREDICTED: exosome component 10-like [Megachile rotundata]
Length = 1271
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 167/335 (49%), Gaps = 37/335 (11%)
Query: 60 NSYSPFKHANKEKSSG---SHPYELEITAL------LENPRPEFDFSNVDLDLQRSDSFV 110
NS P +E +G SHPYE E+ L+ P+ S D L +
Sbjct: 210 NSLKPLAIYTEESENGEVYSHPYEFELDMFSPRMDQLKKCEPKKYKSLEDTPL------I 263
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+E + L L + AVD E HS RSF G T L+QIST DYL+DT++L E+
Sbjct: 264 IIENPVDIKLLLEDLKRYKEIAVDLEHHSYRSFQGITCLMQISTGDADYLIDTLSLRSEL 323
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
L F P + KVFHG+D D+ WLQRD +Y+VN+FDT +A + L+ P SLAYLL+
Sbjct: 324 HELNEIFTKPTILKVFHGADLDIQWLQRDLSLYIVNMFDTHQAAKQLNLPYLSLAYLLKH 383
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
YC + NK Q DWR RPLP E+ +YA+ D HYLLYI L L N +
Sbjct: 384 YCNIDPNKHFQLADWRIRPLPEELQKYAREDTHYLLYIKDILRNALIDAAN-------GQ 436
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF---RLLNGQGGVSSISSVTQDLV 347
N + RS +C + Y K I + E + SI+ ++ N + + I
Sbjct: 437 INILKSVYDRSTDICKKTYVKPIWT---EESCMSIYRKSQKMFNNKQLYALI-------- 485
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L WRD+ AR D+S +VL + ++ +A P
Sbjct: 486 -ELHKWRDVTAREEDDSTAYVLPNHMLLNIAETLP 519
>gi|401837803|gb|EJT41675.1| RRP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 734
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 183/368 (49%), Gaps = 38/368 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYE--LEITALLENPRPEF----------- 94
KPQ FK+ + ++ PF KEK + P L + EN +
Sbjct: 131 KPQLKFKKSIDNSESHPFIPLLKEKPNALKPLSESLRLAEAEENNPSHYLHPYAYEIDHQ 190
Query: 95 DFSNVDLDLQR---SDSF-----VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
++S+ L +++ S S+ +W++TK++L + L AVD E H RS+ G
Sbjct: 191 EYSSDVLQIKKEIPSKSWDDSEPIWIDTKTKLGLMLEDLKNASEIAVDLEHHDYRSYYGI 250
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+Q+ST + DYLVDTI L D + IL F DP + KVFHG+ D++WLQRD +YVV
Sbjct: 251 VCLMQVSTRERDYLVDTIELRDALHILNEVFTDPLIVKVFHGAFMDIIWLQRDLGLYVVG 310
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+ D H+LL
Sbjct: 311 LFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRARPLSKPMTAYARADTHFLL 370
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I L N +K VL SR + Y+K P S I
Sbjct: 371 NIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKHRPRTPSSEVYSPIE 420
Query: 327 ----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+R+L Q +I+S ++LV+ L WRD +AR DES RFV+ +Q + AL AP
Sbjct: 421 KENPWRVLMYQ---YNITSEKEELVKDLYLWRDFIARRDDESPRFVMPNQLLAALVAYAP 477
Query: 383 ANRTDVYT 390
+ V +
Sbjct: 478 IDVIGVVS 485
>gi|345564419|gb|EGX47382.1| hypothetical protein AOL_s00083g475 [Arthrobotrys oligospora ATCC
24927]
Length = 806
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 159/280 (56%), Gaps = 11/280 (3%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
S S ++V++ +L+E+ L K AVD E H RS++G L+Q+ST ++D+++DT+
Sbjct: 225 STSAIFVDSPQRLHEMMQELVKAEEIAVDLEHHDFRSYIGLVCLMQVSTREQDWIIDTLK 284
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
L DE+ +L FA+PG+ KVFHG+ D++WLQRD +IYVV LFDT A L SLA
Sbjct: 285 LRDELEVLNEVFANPGIVKVFHGAFMDIIWLQRDLNIYVVGLFDTYDAARSLGFTGHSLA 344
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
+LL+ Y +K Q DWR RP+P EML YA++D H+LL+I + EL + N
Sbjct: 345 FLLKKYINFDADKSYQLADWRVRPIPQEMLDYARSDTHFLLFIYDNMRNELIGKSNA--- 401
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESY-PGEAAASSIFFRLLNGQGGVSSISSVTQ 344
+DK V S+ + CL+ Y + E Y P S + +L + + +
Sbjct: 402 AEEDKIETVQNNSKET---CLKTY--DTEPYDPVNGGGSRGWLSIL--KHNAVNFTDEQF 454
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ R + AWRD +AR D++ FV+S +++ A + P +
Sbjct: 455 SVFRAVHAWRDRVAREEDDNPHFVMSKNHLLSFARQMPVD 494
>gi|365758455|gb|EHN00296.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 734
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 183/368 (49%), Gaps = 38/368 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYE--LEITALLENPRPEF----------- 94
KPQ FK+ + ++ PF KEK + P L + EN +
Sbjct: 131 KPQLKFKKSIDNSESHPFIPLLKEKPNALKPLSESLRLAEAEENNPSHYLHPYAYEIDHQ 190
Query: 95 DFSNVDLDLQR---SDSF-----VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
++S+ L +++ S S+ +W++TK++L + L AVD E H RS+ G
Sbjct: 191 EYSSDVLQIKKEIPSKSWDDSEPIWIDTKTKLGLMLEDLKNASEIAVDLEHHDYRSYYGI 250
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+Q+ST + DYLVDTI L D + IL F DP + KVFHG+ D++WLQRD +YVV
Sbjct: 251 VCLMQVSTRERDYLVDTIELRDALHILNEVFTDPLIVKVFHGAFMDIIWLQRDLGLYVVG 310
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+ D H+LL
Sbjct: 311 LFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRARPLSKPMTAYARADTHFLL 370
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I L N +K VL SR + Y+K P S I
Sbjct: 371 NIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKHRPRTPSSEVYSPIE 420
Query: 327 ----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+R+L Q +I+S ++LV+ L WRD +AR DES RFV+ +Q + AL AP
Sbjct: 421 KENPWRVLMYQ---YNITSEKEELVKDLYLWRDFIARRDDESPRFVMPNQLLAALVAYAP 477
Query: 383 ANRTDVYT 390
+ V +
Sbjct: 478 IDVIGVVS 485
>gi|224064984|ref|XP_002301622.1| predicted protein [Populus trichocarpa]
gi|222843348|gb|EEE80895.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 139/224 (62%), Gaps = 27/224 (12%)
Query: 697 IVMRYYGGREISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFPDRQQDSYPAVM 756
IVM+YYGGREIS+EDLERALLVGMSP ERRR KKR S K S D++Q M
Sbjct: 16 IVMQYYGGREISEEDLERALLVGMSPHERRRFEKKRRFSSKHSTEVILLDKEQMGAAYTM 75
Query: 757 VESATMDA-TKADNVLGLHAIETQKSGEKEGRSSLTESHESKPPTCSNGGIDQ-LVFSTI 814
S T ++ KA GL E + +G KE +D +V TI
Sbjct: 76 AVSTTGNSLEKAVTKDGLETTEMESTGTKE--------------------LDYFMVKDTI 115
Query: 815 W-KKMNS-TSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTP---NSKVSLLGHGPHGK 869
K+MNS ++ SD+KD+ VGN DD CE + P NSK+SLLGHGPHGK
Sbjct: 116 SDKEMNSDENEASDTKDEYVGNDDDNCEGGPSNGTARNDESAPHKNNSKLSLLGHGPHGK 175
Query: 870 QVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHR 913
QVVD++L EYGEDGIRQFCQRWRQVFVEA+HP FLPAGWDVMHR
Sbjct: 176 QVVDHILEEYGEDGIRQFCQRWRQVFVEAVHPRFLPAGWDVMHR 219
>gi|45708813|gb|AAH67962.1| exosome component 10 [Xenopus (Silurana) tropicalis]
Length = 883
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 16/252 (6%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVD E HS RSFLG T L+QIST EDY++D + L + IL F +P + KV HG+D
Sbjct: 306 FAVDLEHHSYRSFLGLTCLMQISTRTEDYIIDVLELRSNMYILNESFTNPSIIKVLHGAD 365
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQ+DF +Y+VN+FDT +A +L+ + SL +LL YC V ++K Q DWR RPL
Sbjct: 366 SDIEWLQKDFGLYIVNMFDTHQAARILNLGRHSLDHLLRLYCNVESDKRYQLADWRIRPL 425
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EM++YA+ D HYLL+I + L NE N + ++S +CL+ +T
Sbjct: 426 PEEMIEYARADTHYLLFIYDKMRTALLGAANEQQ-------NLLQLVWQKSRDICLKKFT 478
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K I + L Q + +T R L AWRD +AR DES +VL
Sbjct: 479 KSI-------FTEDSYLELYQKQKKHLNTQQLTA--FRLLFAWRDKIARQEDESTGYVLP 529
Query: 371 DQAIIALANKAP 382
+ ++ + + P
Sbjct: 530 NHMLLKITEELP 541
>gi|348041370|ref|NP_998833.2| exosome component 10 [Xenopus (Silurana) tropicalis]
Length = 890
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 16/252 (6%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVD E HS RSFLG T L+QIST EDY++D + L + IL F +P + KV HG+D
Sbjct: 313 FAVDLEHHSYRSFLGLTCLMQISTRTEDYIIDVLELRSNMYILNESFTNPSIIKVLHGAD 372
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQ+DF +Y+VN+FDT +A +L+ + SL +LL YC V ++K Q DWR RPL
Sbjct: 373 SDIEWLQKDFGLYIVNMFDTHQAARILNLGRHSLDHLLRLYCNVESDKRYQLADWRIRPL 432
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EM++YA+ D HYLL+I + L NE N + ++S +CL+ +T
Sbjct: 433 PEEMIEYARADTHYLLFIYDKMRTALLGAANEQQ-------NLLQLVWQKSRDICLKKFT 485
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K I + L Q + +T R L AWRD +AR DES +VL
Sbjct: 486 KSI-------FTEDSYLELYQKQKKHLNTQQLTA--FRLLFAWRDKIARQEDESTGYVLP 536
Query: 371 DQAIIALANKAP 382
+ ++ + + P
Sbjct: 537 NHMLLKITEELP 548
>gi|157124837|ref|XP_001660547.1| hypothetical protein AaeL_AAEL010007 [Aedes aegypti]
gi|108873835|gb|EAT38060.1| AAEL010007-PA [Aedes aegypti]
Length = 949
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 177/362 (48%), Gaps = 54/362 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS-------------------HPYELEI----- 83
+PQ NFK + ++ +PF KEK + HPYE E+
Sbjct: 191 RPQVNFKVPVDNSPLNPFVPKIKEKPNSMKPLAVLPEYDEAGNIVSYLHPYEFELDRFEP 250
Query: 84 --TALLE-NPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
AL E P + LD+ ++ +SQL L L A+D E HS
Sbjct: 251 LKEALKEVEPEEPLKLESTPLDI--------IDKESQLPGLLKELKAAKELAIDLEHHSY 302
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
R++ GFT L+QIST +DY++DT+AL +E+ IL F +P V KV HG+ +D+ WLQRD
Sbjct: 303 RTYQGFTCLMQISTRSKDYIIDTLALREELHILNEVFTNPKVVKVLHGAISDIEWLQRDL 362
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+Y+VN+FDT +A +VL + L +LL+ YC + T+K Q DWR RP+P ++YA+
Sbjct: 363 SLYIVNMFDTGEAAKVLEFSRIGLQFLLKHYCNIDTDKAYQLADWRIRPIPHNFIEYARK 422
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D HYLLYI + EL +G +F+ +S +C Q Y K + + E
Sbjct: 423 DTHYLLYIYDRMRNELIAKG----------ASFLPTVYNKSTYMCKQRYVKPVIN---ED 469
Query: 321 AASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
A +I+ R R + WRD +AR DES +VL + +A+K
Sbjct: 470 AVMNIYRR------SKHVFDQRQMYAFREILYWRDKLARQEDESPGYVLPQHMALDIASK 523
Query: 381 AP 382
P
Sbjct: 524 LP 525
>gi|374106609|gb|AEY95518.1| FACL001Cp [Ashbya gossypii FDAG1]
Length = 745
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 180/368 (48%), Gaps = 38/368 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + + PFK KEK HPYE EI
Sbjct: 131 KPQLLFKTPVDNTELHPFKPLLKEKPHALKPLEESLMLAPEEENFPAHYPHPYEYEIDKQ 190
Query: 87 LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
N +D + +WV+ L+++ + L + AVD E H RS+ G
Sbjct: 191 PYNDSVLEVRERIDPQPWEATEPIWVDNVESLSQMLDELKEVKELAVDLEHHDYRSYYGI 250
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+QIS+ +D+LVDTIAL D++ +L F DP V KVFHG+ D++WLQRD +YVV+
Sbjct: 251 VCLMQISSRSKDWLVDTIALRDDLHVLNVIFTDPTVVKVFHGAFMDMIWLQRDLGLYVVS 310
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A L P+ SLAYLLET+ T+K Q DWR RPLP + YA++D H+LL
Sbjct: 311 LFDTYHASRALGFPKHSLAYLLETFAKFKTSKKYQLADWRVRPLPKPLRDYARSDTHFLL 370
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I L L + G K VL ASR + YT P S I
Sbjct: 371 SIYDDLRNALVKAG---------KLAEVLNASRNVAKRRFE-YTSFRPRIPDSNVYSPIE 420
Query: 327 ----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+R L Q ++ + L+++L WRD +AR DES+R+V+ +Q +++L + +P
Sbjct: 421 STEPWRKLMYQ---YNLPPSKEPLLKKLYEWRDTVARRDDESVRYVMPNQLLVSLVSLSP 477
Query: 383 ANRTDVYT 390
+ V +
Sbjct: 478 SETAGVLS 485
>gi|302306959|ref|NP_983403.2| ACL001Cp [Ashbya gossypii ATCC 10895]
gi|299788769|gb|AAS51227.2| ACL001Cp [Ashbya gossypii ATCC 10895]
Length = 745
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 180/368 (48%), Gaps = 38/368 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + + PFK KEK HPYE EI
Sbjct: 131 KPQLLFKTPVDNTELHPFKPLLKEKPHALKPLEESLMLAPEEENVPAHYPHPYEYEIDKQ 190
Query: 87 LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
N +D + +WV+ L+++ + L + AVD E H RS+ G
Sbjct: 191 PYNDSVLEVRERIDPQPWEATEPIWVDNVESLSQMLDELKEVKELAVDLEHHDYRSYYGI 250
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+QIS+ +D+LVDTIAL D++ +L F DP V KVFHG+ D++WLQRD +YVV+
Sbjct: 251 VCLMQISSRSKDWLVDTIALRDDLHVLNVIFTDPTVVKVFHGAFMDMIWLQRDLGLYVVS 310
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A L P+ SLAYLLET+ T+K Q DWR RPLP + YA++D H+LL
Sbjct: 311 LFDTYHASRALGFPKHSLAYLLETFAKFKTSKKYQLADWRVRPLPKPLRDYARSDTHFLL 370
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I L L + G K VL ASR + YT P S I
Sbjct: 371 SIYDDLRNALVKAG---------KLAEVLNASRNVAKRRFE-YTSFRPRIPDSNVYSPIE 420
Query: 327 ----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+R L Q ++ + L+++L WRD +AR DES+R+V+ +Q +++L + +P
Sbjct: 421 STEPWRKLMYQ---YNLPPSKEPLLKKLYEWRDTVARRDDESVRYVMPNQLLVSLVSLSP 477
Query: 383 ANRTDVYT 390
+ V +
Sbjct: 478 SETAGVLS 485
>gi|388857402|emb|CCF49076.1| related to RRP6-Exonuclease component of the nuclear exosome
[Ustilago hordei]
Length = 1006
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 168/334 (50%), Gaps = 26/334 (7%)
Query: 63 SPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELA 122
+P+ H S H A +NP P + + L F WV TK+Q+ +L
Sbjct: 301 NPYYHEILHSSPPIHALSKPDPATKDNPPPRLNEKDPSLSTDAC-PFQWVSTKAQIEQLR 359
Query: 123 NALSKEFF--FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI----SILQPF 176
+ L ++ A+D E HS R++ G L+Q+ST D+++DT L DE+ +L
Sbjct: 360 DHLDEDRVKEIAIDLEHHSYRTYQGIVCLMQLSTRWGDWIIDT--LSDEVRQHAELLNSS 417
Query: 177 FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVAT 236
F DP KV HG+++DV+WLQRD +Y+VNLFDT A VL P L YL+ YC
Sbjct: 418 FTDPSKVKVLHGANHDVLWLQRDLGLYLVNLFDTYHATNVLMFPSHGLNYLMARYCNFDA 477
Query: 237 NKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLE 296
+K Q DWR RPLP EML YA++D H LLYI L EL + G + + E
Sbjct: 478 DKRYQLADWRIRPLPKEMLYYARSDTHTLLYIYDNLRHELMESGG---------LDAIRE 528
Query: 297 ASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSS-----ISSVTQD--LVR 348
RS V + Y KE GE +R G+ + + +S + ++ LVR
Sbjct: 529 VFNRSKDVAMSTYAKEEWDSQGETREGWRSVWRKWGGEAALGTEDRRELSQMKKEERLVR 588
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L WRD +AR DES R++L ++ LA +AP
Sbjct: 589 ALHKWRDGVAREEDESPRYILGANNLMMLAARAP 622
>gi|367005124|ref|XP_003687294.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
gi|357525598|emb|CCE64860.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
Length = 743
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 148/279 (53%), Gaps = 17/279 (6%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+WV+ + L + N L AVD E H RS+ G T L+QIST DYLVDTIAL D+
Sbjct: 211 IWVDNEESLAAMLNELKTATELAVDLEHHDFRSYYGITCLMQISTRNTDYLVDTIALRDK 270
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+ +L F DP + K+ HG+ D++WLQRD +Y+V+LFDT A L P+ SLAYLLE
Sbjct: 271 LQVLNVVFTDPKITKILHGAFMDIIWLQRDLGLYIVSLFDTYHASRALGFPRHSLAYLLE 330
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ T+K Q DWR RPL M YA+ D H+LL I L N +D
Sbjct: 331 RFAHFKTSKQYQLADWRTRPLSKAMNAYARADTHFLLNIFDQL---------RNMLIQED 381
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEA----AASSIFFRLLNGQGGVSSISSVTQD 345
K +L SR+ + Y+K + P A S + +R + Q I S +
Sbjct: 382 KLASMLHESRKVAKRRFE-YSKYKPTLPSSAVFSPTESDMPWRSMIYQYN---IPSQKVE 437
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LV+RL WRD +AR DES R+++ +Q I +L P N
Sbjct: 438 LVKRLWEWRDTIARRDDESPRYIMPNQLIASLVEYVPTN 476
>gi|150951537|ref|XP_001387875.2| exosome component 3'-5' exonuclease [Scheffersomyces stipitis CBS
6054]
gi|149388676|gb|EAZ63852.2| ribosomal RNA processing 3'-5' exonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 792
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 188/376 (50%), Gaps = 61/376 (16%)
Query: 48 KPQHNFKRVLADNSYS-PFKHANKEKSSGSHPYELEITALLENPRPEFDFS--------- 97
KPQ +F RV DNS S PFK K +G +E + L++P P ++ S
Sbjct: 143 KPQLSF-RVPVDNSESHPFKPKLTCKPNGLKSFEESVE--LKSPEPNYENSIEIVDPAFY 199
Query: 98 ----NVDLDLQ------------------RSDSFVWVETKSQLNELANALSKEFFFAVDT 135
++D Q S + WV+T +L ++ L K AVD
Sbjct: 200 PQPYEYEIDTQPYPASILEKSEPIAPQDWTSTTATWVDTVEELQKMVEELKKSSEIAVDL 259
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
E H RS+ G L+QIS +D+++DT+AL D++ L F +P + KVFHG+ D++W
Sbjct: 260 EHHDYRSYYGIVCLMQISNRDQDWIIDTLALRDDLECLNTVFTNPHIVKVFHGAFMDIIW 319
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +Y+V+LFDT A + L P+ SLAYLLET+ T+K Q DWR RPL M+
Sbjct: 320 LQRDLGLYIVSLFDTYHASKSLGFPKFSLAYLLETFAHFKTSKKYQLADWRIRPLSPPMM 379
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA++D H+LL I L +L GNE K VL SR QV + E
Sbjct: 380 AYARSDTHFLLSIFDQLKNKLIDAGNE-------KLQRVLFDSR-------QVAKRRFEY 425
Query: 316 YPGEAAASSIFFRL------LNGQGGVSSI------SSVTQDLVRRLCAWRDLMARVHDE 363
P ++I R+ N + SSI S + +V L WRD +A++ DE
Sbjct: 426 TPFRPLTNNINSRVSCPVMASNPREPFSSIMVQYNVPSHKKSVVEALYNWRDRIAKIEDE 485
Query: 364 SLRFVLSDQAIIALAN 379
S+RFV+ +Q ++ LAN
Sbjct: 486 SVRFVMPNQLLVNLAN 501
>gi|254579989|ref|XP_002495980.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
gi|238938871|emb|CAR27047.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
Length = 741
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 168/339 (49%), Gaps = 44/339 (12%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
VWV+ K L+ + L K AVD E H RS+ G L+Q+ST + DYLVDT+AL D+
Sbjct: 213 VWVDNKESLDSMLQDLKKSTEIAVDLEHHDYRSYYGIVCLMQVSTRQTDYLVDTLALRDD 272
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+ +L FA+P + KVFHG+ D++WLQRD +Y+V+LFDT A L P+ SLAYLLE
Sbjct: 273 LVVLNEVFANPLIVKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASRALGFPRHSLAYLLE 332
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
T+ T+K Q DWR RPL M YA+ D H+LL I L N ++
Sbjct: 333 TFASFKTSKKYQLADWRVRPLSKAMSAYARADTHFLLNIYDQL---------RNKLIIEN 383
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI----FFRLLNGQGGVSSISSVTQD 345
K VL SR Q Y+K P + S + +++L Q + +
Sbjct: 384 KLAGVLAESRNVAKRSFQ-YSKYRPKVPNSSVYSPVDRADGWKVLMNQYNIPLEKEI--- 439
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLS 405
LV+ L WRD +AR DES R+V+ +Q + L + P + T V +
Sbjct: 440 LVKNLYEWRDTIARRDDESPRYVMPNQLLAYLVDYTPLDPTGVISV-------------- 485
Query: 406 SSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQKC 444
SP V H V N + L ++++ +LQ+
Sbjct: 486 ------SPTVTDH-------VRTNAKALANLIVKSLQQI 511
>gi|156844457|ref|XP_001645291.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156115951|gb|EDO17433.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 746
Score = 189 bits (479), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 169/327 (51%), Gaps = 32/327 (9%)
Query: 76 SHPYELEI------TALLENPRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKE 128
+HPYE+EI ++L+ P L Q +S WV+T L + + L +
Sbjct: 180 AHPYEVEIDKQEYNASVLQVAEP--------LKSQPWNSESTWVDTSEALQSMLDKLKEC 231
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHG 188
AVD E H RS+ G L+QIST KED+LVDT+AL DE+ IL FADP + KV HG
Sbjct: 232 TEIAVDLEHHDYRSYYGIVCLMQISTRKEDFLVDTLALRDELHILNEVFADPNILKVLHG 291
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+ D++WLQRD +YVV+LFDT A L P+ SLAYLLE Y T+K Q DWR R
Sbjct: 292 AFMDIIWLQRDLGLYVVSLFDTYHASRALGFPRHSLAYLLEKYANFKTSKKYQLADWRVR 351
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PL M YA+ D H+LL I + N ++K VL SR +
Sbjct: 352 PLSKPMHAYARADTHFLLNIYDQI---------RNQLIRENKLAEVLFESRNVAKRRFE- 401
Query: 309 YTKEIESYPGEAAASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
Y++ P A + I +R L Q V S +L++R+ WRD++AR DES
Sbjct: 402 YSRFRPKVPSPAVFTPIEKEEPWRTLVYQYNV---PSTKIELLKRIWEWRDMIARRDDES 458
Query: 365 LRFVLSDQAIIALANKAPANRTDVYTT 391
R+++ +Q +I+L P + V +
Sbjct: 459 PRYIMPNQLMISLVEYTPIDPAGVISV 485
>gi|168065993|ref|XP_001784929.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663516|gb|EDQ50276.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 515
Score = 189 bits (479), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 189/358 (52%), Gaps = 40/358 (11%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEK----SSGSHPYELEITAL-------LENP 90
+++S P+PQ+ F V+ DNS +PFKH +K S HP E +T + LE P
Sbjct: 151 HVRSIPRPQNKFD-VMVDNSNTPFKHPQVQKLDSQSEDMHPLEDVLTKMEYVNEKMLEAP 209
Query: 91 RPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALI 150
P+ + VD + T S+L ++A AVD E H+ RSF GF L+
Sbjct: 210 VPQ-EPRPVD-----ETPLTVISTASELKDMAMKCRLAGEIAVDLENHNYRSFQGFVCLM 263
Query: 151 QISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
Q+ST ED++VD +AL + L+ FAD V KV HG+D D+ WLQRDF IYV N+FD
Sbjct: 264 QVSTRSEDFIVDALALRSHMGPSLKDLFADANVKKVMHGADRDIEWLQRDFGIYVCNMFD 323
Query: 210 TAK-ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
T + A VL LA+L++ + + +K Q DWR RPLPAEM++YA+ D HYLLY+
Sbjct: 324 TGQQAARVLQLEGFGLAFLMQRFLKINPDKRYQLADWRIRPLPAEMIKYAREDTHYLLYL 383
Query: 269 AK----CLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASS 324
LV+ GN D + VL+ +RS +CL++Y K+I +
Sbjct: 384 YDLLRVVLVSMRSTAGN-------DADDPVLQVYKRSRDICLKMYKKDI-------LTET 429
Query: 325 IFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ L Q + +S ++ L AWRD +AR DES FVL +Q + LA + P
Sbjct: 430 SYLSLYGLQD--KNFNSEQMSVLAGLYAWRDNLARKLDESTGFVLPNQLLYKLAEEMP 485
>gi|448519311|ref|XP_003868060.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis
Co 90-125]
gi|380352399|emb|CCG22625.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis]
Length = 814
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 169/317 (53%), Gaps = 32/317 (10%)
Query: 76 SHPYELEIT------ALLEN--PRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
+HPYE EI ++LE P P D+S S S +WV+T LNE+ LS+
Sbjct: 239 AHPYEYEIDTQPYPDSILEESEPIPPNDWS--------STSAIWVDTVDGLNEMIKELSQ 290
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
AVD E H RS+ G L+QIS ++D+++DT+ L ++S L F DP + KV H
Sbjct: 291 SSEIAVDLEHHDYRSYYGIVCLMQISNREKDWIIDTLVLRGDLSALNKIFTDPKIIKVLH 350
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +Y+V+LFDT A L + SL YLL+T+ T+K Q DWR
Sbjct: 351 GAFMDIIWLQRDLGLYIVSLFDTYHASRQLGFSKFSLQYLLDTFAHFRTSKKYQLADWRI 410
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP ML YA++D H+LLYI L N DK VL SR+ +
Sbjct: 411 RPLPKPMLAYARSDTHFLLYIFDQL---------RNKLIDSDKLARVLFDSRQVAKRRFE 461
Query: 308 VYTK--EIESYPGEAAASSIFFRLLNGQGGV----SSISSVTQDLVRRLCAWRDLMARVH 361
YTK + S G + + N G ++ + + +V +L WRDL+AR
Sbjct: 462 -YTKFRPLSSNLGSKVSCPVMAANPNEPWGSLMYQYNVPAFKRPVVEQLYKWRDLIARQE 520
Query: 362 DESLRFVLSDQAIIALA 378
DES+R+++ +Q +++LA
Sbjct: 521 DESVRYIMPNQLLVSLA 537
>gi|354544046|emb|CCE40768.1| hypothetical protein CPAR2_108030 [Candida parapsilosis]
Length = 771
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 184/376 (48%), Gaps = 65/376 (17%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLD----- 102
KPQ FK + ++ PFK K + P+ E L NP P ++ S +D
Sbjct: 138 KPQSKFKVSVDNSEQEPFKPKITGKPNALQPW--ESVNKLTNPAPVYEDSIEVVDPPFYA 195
Query: 103 ----------------LQRSD----------SFVWVETKSQLNELANALSKEFFFAVDTE 136
L +SD S +WV+T LN++ + L + AVD E
Sbjct: 196 HPYEYEIDTQPYPKSILSKSDPVPPKDWSSTSAIWVDTTEGLNKMIDELQQSTEIAVDLE 255
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
H RS+ G L+QIS ++D+++DT+ L D++S+L F DP + KV HG+ D++WL
Sbjct: 256 HHDYRSYYGIVCLMQISNREKDWIIDTLVLRDDLSVLNKVFTDPKIIKVLHGAFMDIIWL 315
Query: 197 QRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQ 256
QRD +Y+V+LFDT A L + SL YLL+T+ T+K Q DWR RPLP ML
Sbjct: 316 QRDLGLYIVSLFDTYHASRQLGFSKFSLQYLLDTFAHFRTSKKYQLADWRIRPLPKPMLA 375
Query: 257 YAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR--------------SN 302
YA++D H+LLYI L N DK VL SR+ SN
Sbjct: 376 YARSDTHFLLYIFDQL---------RNKLIDSDKLAQVLFDSRQVAKRRFEYTKFRPLSN 426
Query: 303 TVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHD 362
+ +V + + P E S ++ ++ + + +V +L WRDL+AR D
Sbjct: 427 NLGSKVSCPVMAANPKEPWGSLMY---------QYNVPAFKRPVVEQLYKWRDLIARKED 477
Query: 363 ESLRFVLSDQAIIALA 378
ES+R+++ +Q +++LA
Sbjct: 478 ESVRYIMPNQLLVSLA 493
>gi|326496869|dbj|BAJ98461.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 139/245 (56%), Gaps = 17/245 (6%)
Query: 145 GFTALIQISTEKEDYLVDTIALHDEI-SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIY 203
G T L+QIST ED+++DT+ L I S L+ F DP KV HG+D D+MWLQRDF +Y
Sbjct: 1 GLTCLMQISTRSEDFIIDTLKLRIYIGSYLKEIFKDPTKRKVMHGADRDIMWLQRDFRVY 60
Query: 204 VVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAH 263
V NLFDT +A VL + SL +LL +CGV NK Q DWR RPL EM++YA+ D H
Sbjct: 61 VCNLFDTGQASRVLQMERNSLEHLLHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTH 120
Query: 264 YLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS 323
YLLYI + L+++ + + +LE +RSN +CLQ+Y KE+
Sbjct: 121 YLLYIYDLMRLRLQRESTSEN-------DLLLEVQKRSNDICLQLYEKEL-------LTD 166
Query: 324 SIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+ + Q +++ +V L WRD +AR DES +VL ++A+I +A K P
Sbjct: 167 KSYLHIYGLQ--EHELTAAQLAVVSALHQWRDYIARDQDESTGYVLPNKALIEIAKKMPT 224
Query: 384 NRTDV 388
D+
Sbjct: 225 TTADL 229
>gi|402223082|gb|EJU03147.1| hypothetical protein DACRYDRAFT_50127, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 555
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 151/282 (53%), Gaps = 27/282 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F WV T +L ++ L AVD E H RS+ G L+Q+ST + D++VDT+AL +
Sbjct: 264 FEWVGTPDRLAQMLEKLKAAKEIAVDLEHHDYRSYRGIVCLMQLSTREADWVVDTLALRE 323
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
E+ +L FAD + KVFHG+ D+ WLQRDF++Y+VNLFDT A + L+ P SLA+LL
Sbjct: 324 ELEVLNEVFADSNIVKVFHGATMDINWLQRDFNLYIVNLFDTYYASKALNFPAFSLAFLL 383
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ YC +K Q DWR RPLP EM+ YA++D H+LLY+ + +L ++ +
Sbjct: 384 DLYCEFKADKRFQLADWRIRPLPQEMMDYARSDTHFLLYVYDQVRNDLLKRVEGGPDLVE 443
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD--- 345
F+ S LQV+ E G NG GG +++
Sbjct: 444 KVFDL-------SKDTALQVWEPERYDPAG------------NGPGGWQNLTRKWNKHFM 484
Query: 346 -----LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ + + AWRD +AR DE LR+VL++ + ALA P
Sbjct: 485 GSKLAVFKAVYAWRDRVAREEDEGLRYVLTNPQMFALAENCP 526
>gi|344234698|gb|EGV66566.1| hypothetical protein CANTEDRAFT_128954 [Candida tenuis ATCC 10573]
Length = 737
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 176/354 (49%), Gaps = 61/354 (17%)
Query: 60 NSYSPFKHANK----EKSSGS---------HPYELEITALLENPRPEFDFSNVD---LDL 103
N+ PF+ + K E S GS HPYE EI P S D +
Sbjct: 149 NALIPFEESVKLVQPENSDGSDIVDPPFYPHPYEYEID---NQPYRNSIISKCDPIPSNP 205
Query: 104 QRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT 163
S + +W++ Q++EL N LS AVD E H R++ G L+QIST K+D+++DT
Sbjct: 206 WESTNAIWIDQPEQIDELVNELSNSSEIAVDLEHHDYRTYYGLVCLMQISTRKKDWIIDT 265
Query: 164 IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
+AL D++ L F +P + KVFHG+ D++WLQRD +Y+V+LFDT A + L P+ S
Sbjct: 266 LALRDDLQKLNVVFTNPQIVKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASKKLGFPKFS 325
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
LAYLLET+ T+K Q DWR RPL ML YA++D H+LL I L +L QGN
Sbjct: 326 LAYLLETFAKFKTSKKYQLADWRIRPLSTSMLAYARSDTHFLLNIFDHLKNKLIDQGN-- 383
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS------ 337
K VL SR + YTK FR L G V+
Sbjct: 384 -----GKMQSVLHDSRLVAKRRFE-YTK---------------FRPLKGTSLVTCPVMSS 422
Query: 338 -------------SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+I + +V L WRD +AR DES+R+++S+QA+ LA
Sbjct: 423 NPLEPFLPIVVQYNIPYHIKPVVEVLYNWRDNLARQFDESVRYIMSNQALALLA 476
>gi|126328720|ref|XP_001364275.1| PREDICTED: exosome component 10 isoform 2 [Monodelphis domestica]
Length = 836
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 149/272 (54%), Gaps = 16/272 (5%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+V T L EL L F VD E HS RSFLG T L+QIST ED+++DT+ L ++
Sbjct: 266 FVTTLDALVELNEKLLNCKDFGVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDL 325
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
IL F DP + KVFHG+D D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+
Sbjct: 326 YILNESFTDPSIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARILNLGRHSLDHLLKL 385
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
YC V +NK Q DWR RPLP EM YA+ D HYLLYI + ++L + N +
Sbjct: 386 YCNVESNKQYQLADWRIRPLPEEMFNYARHDTHYLLYIYDKMRSDLWDRANGQPA----Q 441
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
V + RS +CL+ + K I + L Q + +T + L
Sbjct: 442 LQVVWQ---RSKDICLKRFIKPI-------FMEDSYLELYRKQKKHLNTQQLT--AFQLL 489
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+WRD AR DES +VL + ++ +A + P
Sbjct: 490 YSWRDRTARREDESYGYVLPNHMMLKIAEELP 521
>gi|126328718|ref|XP_001364197.1| PREDICTED: exosome component 10 isoform 1 [Monodelphis domestica]
Length = 861
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 149/272 (54%), Gaps = 16/272 (5%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+V T L EL L F VD E HS RSFLG T L+QIST ED+++DT+ L ++
Sbjct: 266 FVTTLDALVELNEKLLNCKDFGVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDL 325
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
IL F DP + KVFHG+D D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+
Sbjct: 326 YILNESFTDPSIVKVFHGADMDIEWLQKDFGLYVVNMFDTHQAARILNLGRHSLDHLLKL 385
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
YC V +NK Q DWR RPLP EM YA+ D HYLLYI + ++L + N +
Sbjct: 386 YCNVESNKQYQLADWRIRPLPEEMFNYARHDTHYLLYIYDKMRSDLWDRANGQPA----Q 441
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
V + RS +CL+ + K I + L Q + +T + L
Sbjct: 442 LQVVWQ---RSKDICLKRFIKPI-------FMEDSYLELYRKQKKHLNTQQLT--AFQLL 489
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+WRD AR DES +VL + ++ +A + P
Sbjct: 490 YSWRDRTARREDESYGYVLPNHMMLKIAEELP 521
>gi|50552133|ref|XP_503541.1| YALI0E04444p [Yarrowia lipolytica]
gi|49649410|emb|CAG79122.1| YALI0E04444p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 172/327 (52%), Gaps = 35/327 (10%)
Query: 77 HPYELEITALLENPRPEFDFSNVDL------DLQRSDSFVWVETKSQLNELANALSKEFF 130
PY EI +E P P+ + ++ + + D +++V+T+ +L ++ + L +
Sbjct: 186 QPYAKEI---MEQPYPDEVYEETEVIPNRPWEAEGEDEYIYVDTEEKLRDMVDHLKTQEE 242
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
A+D E HS+R++ G T L+Q+S+ ++DY++DTIAL + + I DP + KV HG+
Sbjct: 243 IAIDVEHHSMRTYYGITCLVQVSSREQDYIIDTIALRN-LEIFNEVLTDPKIVKVLHGAT 301
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ WLQRDF +Y+V+LFDT A + L SLA+LL+ Y T+K Q DWR RP+
Sbjct: 302 MDIQWLQRDFGLYIVSLFDTFHAAQALGLKGHSLAFLLQHYANFVTSKKYQLSDWRIRPM 361
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
E L YA+ D H+LL I L +N+ DK VLE SR++ +
Sbjct: 362 SPEQLLYARADTHFLLNIYDQL---------KNALVQKDKIEGVLEKSRQTAS------- 405
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSS------ISSVTQDLVRRLCAWRDLMARVHDES 364
+ Y + + + +GG++ I+ + + + L WRD MAR DES
Sbjct: 406 ---QRYEYTGYDPRYYLKSFDYEGGINRLISQFHITGPSVSVAKALFLWRDSMARKEDES 462
Query: 365 LRFVLSDQAIIALANKAPANRTDVYTT 391
+V+ + +++LAN+ P V++
Sbjct: 463 TGYVMPNYLLVSLANRMPQTPEAVFSV 489
>gi|170035413|ref|XP_001845564.1| exosome component 10 [Culex quinquefasciatus]
gi|167877380|gb|EDS40763.1| exosome component 10 [Culex quinquefasciatus]
Length = 796
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 177/362 (48%), Gaps = 54/362 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------------------SGSHPYELEITALLE 88
+PQ NFK + +++ +PF K+K S HPYE E+
Sbjct: 181 RPQINFKVPVDNSALNPFVPKIKDKPNSLKPLAVLPEYDEAGNIVSYLHPYEFELDRFEP 240
Query: 89 N--------PRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+ P+ D + LD +++ + Q+ L L + A+D E HS
Sbjct: 241 SKKALKSVEPQEPLDLESTPLD--------FIDKEDQVAPLLEELRQAKELAIDLEHHSY 292
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
R+F GFT L+QIST +DY++DT+AL +E+ +L F D V KV HGS +D+ WLQRD
Sbjct: 293 RTFQGFTCLMQISTRTKDYIIDTLALREELHVLNEVFTDTKVVKVLHGSISDIEWLQRDL 352
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVVN+FDT +A +VL + L +LL+ YC + T+K Q DWR RP+P ++YA+
Sbjct: 353 ALYVVNMFDTGEAAKVLEFSRIGLQFLLKHYCNIETDKAYQLADWRIRPIPKNFIEYARK 412
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D HYLLYI + EL ++G +F+ +S +C Y K + + E
Sbjct: 413 DTHYLLYIYDRMRNELIEKGA----------SFLQTVYNKSTFLCKHRYEKPVIN---ED 459
Query: 321 AASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
+ +I+ R R + WRD AR+ DES +VL + +A+K
Sbjct: 460 SIMNIYHR------SKHVFDQRQMYAFREILYWRDKTARLEDESAGYVLPQHMALDIASK 513
Query: 381 AP 382
P
Sbjct: 514 LP 515
>gi|260950129|ref|XP_002619361.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
gi|238846933|gb|EEQ36397.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
Length = 738
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 187/379 (49%), Gaps = 55/379 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG--------------------------SHPYEL 81
KPQ NF+ + ++ SPFK + K +HPYE
Sbjct: 132 KPQENFRSTVDNSDSSPFKPRLENKPYALKSLEESLKLRFPDPTDDGKVSAPHYAHPYEF 191
Query: 82 EITALLENPRPEFDFSNVDLDLQRSD----SFVWVETKSQLNELANALSKEFFFAVDTEQ 137
EI + P PE V+ + +D + WV+T L E+ AL A+D E
Sbjct: 192 EI---MNQPYPESCL-QVNKPVPSTDWATTAAKWVDTVDALQEMIEALRSSTEIAIDLEH 247
Query: 138 HSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQ 197
H RS+ G T L+QIS ++D++VDT+ALHD++ L FA+P + KV HG++ D++WLQ
Sbjct: 248 HDYRSYYGITCLMQISNREQDWIVDTLALHDDLRDLNEIFANPAILKVLHGANMDIIWLQ 307
Query: 198 RDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQY 257
RD +Y+V+LFDT A + L P+ SLAYLLE + T+K Q DWR RPL M+QY
Sbjct: 308 RDLGLYIVSLFDTYHASKKLGFPKFSLAYLLENFAHFKTSKKYQLADWRIRPLTDAMMQY 367
Query: 258 AQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYP 317
A+ D H+LL I L +L G K VL SR+ V ++ E
Sbjct: 368 ARADTHFLLNIYDQLRNKLLNAGQ-------GKVQEVLYESRK-------VASRRFEFNS 413
Query: 318 GEAAASSIFFRLLNGQG------GVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSD 371
+ + + G G +I ++V+ L WRD +AR DES R+++S+
Sbjct: 414 FKQDQTDNWMHSYGGMGQERWVMNQYNIEPERIEIVQALINWRDKVAREKDESTRYIMSN 473
Query: 372 QAIIALAN-KAPANRTDVY 389
Q + L++ AP + + V+
Sbjct: 474 QVLANLSSLVAPVDASKVH 492
>gi|391347098|ref|XP_003747802.1| PREDICTED: exosome component 10-like [Metaseiulus occidentalis]
Length = 867
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 193/406 (47%), Gaps = 62/406 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-----------------SHPYELEITALLENP 90
+PQ +F + DNS SPF K+K + SHPYE EI +P
Sbjct: 168 RPQLSFPDKI-DNSNSPFVPIIKDKPNALKPLAILVETIDGEETYSHPYEFEIEKF--SP 224
Query: 91 RPE---------FDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLR 141
E F F L + V T L ++ L + A+D E HS R
Sbjct: 225 TDEQMHSFIPSIFMFPQETKPLGET-PLELVSTPGALKKVLEELKQHRQIAIDLEHHSFR 283
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
SF+GFT L+Q+ST +DY++D + L + +L DP + KV HGS +DV WLQRDF
Sbjct: 284 SFMGFTCLVQVSTWDKDYIIDPLELRGHLHVLNEVTTDPKIVKVLHGSHSDVQWLQRDFG 343
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+Y+VNLFDT A ++L+ + SL+YLL+ + V ++K Q DWR RPLP EM++YA+TD
Sbjct: 344 VYIVNLFDTGIAAKLLNYERLSLSYLLKKFEQVESDKRFQLVDWRIRPLPKEMIEYARTD 403
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
HYLL I + L EL NE N + +RS+ +CL+ Y K I +
Sbjct: 404 THYLLSICEKLKEELNNASNEAG-------NLMKAVWQRSSLLCLKRYEKPILTEESHRN 456
Query: 322 ASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKA 381
+ N + + ++ + AWRD +AR DES +VL + ++ +
Sbjct: 457 LLKTANKRFNDKQLYA---------LKHIFAWRDRLARELDESTGYVLPNHMLLNICELL 507
Query: 382 PANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVC 427
P + V C N P P P+V L+++ + V
Sbjct: 508 PREMQGI----------VSCCN-----PCP-PLVKQQLNELHQMVL 537
>gi|312385767|gb|EFR30186.1| hypothetical protein AND_00361 [Anopheles darlingi]
Length = 526
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 183/361 (50%), Gaps = 51/361 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------------------SGSHPYELEITALLE 88
+PQ NFK ++ ++ +PF ++K S HPYE E L+
Sbjct: 129 RPQVNFKTLIDNSIVNPFVPRIRDKPNSLKPLAVLPEYDDAGNIVSYLHPYEFE----LD 184
Query: 89 NPRPEFDF-------SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLR 141
+P D + LD + ++++ +SQL+ L + L A+D E HS R
Sbjct: 185 RFQPAKDVFVPVTPQEPLPLD---TTELLFIDHESQLSALLSDLKAAPQIAIDLEHHSYR 241
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
+F GFT L+Q+ST K+DY+VDT+AL DE+ +L F DP KV HG+ +D+ WLQRD
Sbjct: 242 TFQGFTCLMQLSTRKKDYIVDTLALRDELHVLNEVFTDPRKLKVLHGAISDIEWLQRDLG 301
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+Y+VN+FDT +A VL + L +LL+ YC + T+K Q DWR RPLP ++YA+ D
Sbjct: 302 LYLVNMFDTGEAARVLQFSRIGLQFLLKHYCNIETDKAYQLADWRMRPLPPAFIEYARKD 361
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
HYLLYI + +L ++G + + + +S +C Q Y K I + E +
Sbjct: 362 THYLLYIYDRIRNDLLEKGGD---------SLLQTVYDKSTFLCKQRYQKPIVN---EDS 409
Query: 322 ASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKA 381
+I+ R +R + WRD +AR DES +VL + +A+K
Sbjct: 410 IMNIYRR------SRYVFDHRQMYALREILYWRDKIARQEDESPGYVLPQHMALDIASKL 463
Query: 382 P 382
P
Sbjct: 464 P 464
>gi|218184595|gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
Length = 854
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 183/350 (52%), Gaps = 48/350 (13%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSS-GS---HPYE-LEITALLENPRPEFD- 95
++ + P+PQ + R+L DNS PF+H+ EKS GS HP E + + L++ PE +
Sbjct: 163 HIPTIPRPQ-DVHRILVDNSSKPFEHSWLEKSDDGSRVVHPLEKIPMEQLVDRDFPESEP 221
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTE 155
+ LD F VE L LA L FA IST
Sbjct: 222 IKPLALD---DTPFTHVEDLKSLEVLATKLKSATEFA-------------------ISTR 259
Query: 156 KEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
ED++VDT+ L + L+ F DP KV HG+D D++WLQRDF IYV NLFDT +A
Sbjct: 260 TEDFIVDTLKLRKYLGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNLFDTGQAS 319
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+L + SL +LL +CGV NK Q DWR RPLP EM++YA+ D HYLLYI +
Sbjct: 320 RILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDLMRL 379
Query: 275 EL-KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
L K+ +EN + +LE +RS +CLQ+Y KE+ ++ +S ++ L
Sbjct: 380 RLVKESSDEN--------DLLLEVYKRSKEICLQLYEKELLTH-----SSYLYIHGLKEN 426
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+ SV ++ + WRD +AR DES ++L ++ ++ +A + PA
Sbjct: 427 EFDARQLSVLANIYK----WRDSVARGEDESTGYILPNKTLLEIAKQMPA 472
>gi|384247627|gb|EIE21113.1| 3'-5' exonuclease, partial [Coccomyxa subellipsoidea C-169]
Length = 165
Score = 187 bits (474), Expect = 3e-44, Method: Composition-based stats.
Identities = 86/165 (52%), Positives = 115/165 (69%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V++ +L + L AVD E H+LRS+LG T L+Q+ST ++YLVD +ALHD +
Sbjct: 1 VDSAEKLQRVTEELKGAQQIAVDLEHHALRSYLGITCLLQLSTGDKEYLVDALALHDHMH 60
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
+LQ D V KV HG +ND+ WLQRDFH+Y+VN+FDT KAC+VL ++SLA+LL+ Y
Sbjct: 61 LLQDVLEDARVVKVLHGGENDISWLQRDFHLYLVNVFDTEKACQVLGYEERSLAHLLQRY 120
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
CGV NK QR DWR RPL E++ YA+TD H+L+YIA L +EL
Sbjct: 121 CGVTANKQYQRADWRVRPLAKELVDYARTDVHFLVYIADVLRSEL 165
>gi|194376518|dbj|BAG57405.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 166/300 (55%), Gaps = 28/300 (9%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 250 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 303
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 304 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 363
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 364 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 423
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
WR RPLP EML YA+ D HYLLYI + E+ ++GN + V + RS +
Sbjct: 424 WRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPV----QLQVVWQ---RSRDI 476
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
CL+ + K I + E+ + L Q + +T + L AWRD AR DES
Sbjct: 477 CLKKFIKPI--FTDES-----YLELYRKQKKHLNTQQLTA--FQLLFAWRDKTARREDES 527
>gi|241600516|ref|XP_002405158.1| exosome component, putative [Ixodes scapularis]
gi|215502468|gb|EEC11962.1| exosome component, putative [Ixodes scapularis]
Length = 518
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 147/252 (58%), Gaps = 16/252 (6%)
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
HS R+F GFT L+QIST DY+VDT+AL E+ +L FA+P + KV HG+D DV+WL
Sbjct: 40 HHSYRTFQGFTCLMQISTRSSDYVVDTLALRHELHLLNEVFANPKIIKVLHGADMDVLWL 99
Query: 197 QRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQ 256
QRDF +Y+V LFDT +A VL SLA+LL YC + T+K Q DWR RPLP EM++
Sbjct: 100 QRDFGLYLVGLFDTGQAARVLGMAHLSLAFLLRHYCHLDTDKKFQLADWRIRPLPLEMIK 159
Query: 257 YAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESY 316
YA+ D HYLL++ + +L +GN+ + N + +RS VCL+ Y K + +
Sbjct: 160 YAREDTHYLLHVYDLMRRDLLAKGNQLN-------NLLHSVFQRSKQVCLKRYEKPLYT- 211
Query: 317 PGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
E + ++ + + +S +R L +WRD ++R+ DES +VL + I+
Sbjct: 212 --EDSYLELY------RKSKKAFNSKQLYALRHLYSWRDRISRLEDESTGYVLPNHMILQ 263
Query: 377 LANKAPANRTDV 388
++ P + +
Sbjct: 264 ISEILPREQQGI 275
>gi|134109437|ref|XP_776833.1| hypothetical protein CNBC3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259513|gb|EAL22186.1| hypothetical protein CNBC3240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1016
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 174/332 (52%), Gaps = 42/332 (12%)
Query: 70 KEKSSGSHPYELEITALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
KE + +HPY E T L P F D V F +V+T +L+ + L +
Sbjct: 270 KEIRARTHPYYYE-TKHLPYPTSLFIDSKPVPPQSFDETPFEFVDTPEKLHRMVEKLKQA 328
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI--SILQPFFADPGVCKVF 186
AVD E H +RS+ GFT LIQIST + D++VDT+AL EI F DP + KVF
Sbjct: 329 KEIAVDLEHHDMRSYAGFTCLIQISTRESDWVVDTLALRKEIQQDKFGDVFTDPTIVKVF 388
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWR 246
HG+D+D++WLQRDF I+VVNLFDT AC VL PQ+SL+ LL+ YC +K QR DWR
Sbjct: 389 HGADSDIIWLQRDFEIFVVNLFDTYSACVVLEMPQRSLSALLQHYCNFEADKRYQRADWR 448
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASR------- 299
RPLP ML YA++D H+LL+I L L + + S P + VL+++R
Sbjct: 449 IRPLPDGMLYYARSDTHFLLFIYDNLRNALLHKSSRPS-SPANCGTIVLDSARPNPQEAM 507
Query: 300 -----RSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISS---------VTQD 345
+S L++Y ++ + ++ G+G +++ + Q+
Sbjct: 508 REVLGKSADTALKMYERD-------------SYDIVTGRGSGGWLAAGKKWLPKGEIEQE 554
Query: 346 ---LVRRLCAWRDLMARVHDESLRFVLSDQAI 374
+ R L WRD +AR DES +++ + +
Sbjct: 555 SGWVWRHLHDWRDRVAREMDESPFYIMPNNML 586
>gi|58265702|ref|XP_570007.1| PM-scl autoantigen [Cryptococcus neoformans var. neoformans JEC21]
gi|57226239|gb|AAW42700.1| PM-scl autoantigen, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1016
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 172/322 (53%), Gaps = 22/322 (6%)
Query: 70 KEKSSGSHPYELEITALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
KE + +HPY E T L P F D V F +V+T +L+ + L +
Sbjct: 270 KEIRARTHPYYYE-TKHLPYPTSLFIDSKPVPPQSFDETPFEFVDTPEKLHRMVEKLKQA 328
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI--SILQPFFADPGVCKVF 186
AVD E H +RS+ GFT LIQIST + D++VDT+AL EI F DP + KVF
Sbjct: 329 KEIAVDLEHHDMRSYAGFTCLIQISTRESDWVVDTLALRKEIQQDKFGDVFTDPTIVKVF 388
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWR 246
HG+D+D++WLQRDF I+VVNLFDT AC VL PQ+SL+ LL+ YC +K QR DWR
Sbjct: 389 HGADSDIIWLQRDFEIFVVNLFDTYSACVVLEMPQRSLSALLQHYCNFEADKRYQRADWR 448
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASR------- 299
RPLP ML YA++D H+LL+I L L + + S P + VL+++R
Sbjct: 449 IRPLPDGMLYYARSDTHFLLFIYDNLRNALLHKSSRPS-SPANCGTIVLDSARPNPQEAM 507
Query: 300 -----RSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV--SSISSVTQDLVRRLCA 352
+S L++Y E +SY S + L G+ + I + + R L
Sbjct: 508 REVLGKSADTALKMY--ERDSYDIVTGRGSGGW-LAAGKKWLPKGEIEQESGWVWRHLHD 564
Query: 353 WRDLMARVHDESLRFVLSDQAI 374
WRD +AR DES +++ + +
Sbjct: 565 WRDRVAREMDESPFYIMPNNML 586
>gi|347967581|ref|XP_003436085.1| AGAP002300-PB [Anopheles gambiae str. PEST]
gi|333468394|gb|EGK96928.1| AGAP002300-PB [Anopheles gambiae str. PEST]
Length = 988
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 160/312 (51%), Gaps = 31/312 (9%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE E+ + E P+ + L+R+ ++V+ +SQL EL L
Sbjct: 234 HPYEFELDRFQPAKHVFERTTPQ-----EPVPLERT-PLMYVDQESQLAELVRELQAAKE 287
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
A+D E HS RS+ GFT L+Q+ST +DY+VD +AL DE+ +L F DP KV HGS
Sbjct: 288 IAIDLEHHSYRSYQGFTCLMQLSTRTKDYIVDALALRDELHVLNEVFTDPKKLKVLHGSV 347
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQRD +Y+VN+FDT +A VL + L +LL+ YC + T+K Q DWR RP+
Sbjct: 348 SDIEWLQRDLGLYLVNMFDTGEAARVLQFSRIGLQFLLKHYCNIDTDKAFQLADWRIRPI 407
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P ++YA+ D HYLLYI + EL ++G DK F +C Q Y
Sbjct: 408 PENFIEYARKDTHYLLYIYDRMRNELLEKGESLLQTVYDKSTF----------MCKQRYQ 457
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K + E +I+ R R + WRD +AR+ DES +VL
Sbjct: 458 KPTMN---EDTVMNIYRR------SRYVFDHRQMYAFREVLYWRDQIARLEDESPGYVLP 508
Query: 371 DQAIIALANKAP 382
+ +A+K P
Sbjct: 509 QHMALDIASKLP 520
>gi|322799595|gb|EFZ20873.1| hypothetical protein SINV_12011 [Solenopsis invicta]
Length = 813
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 173/358 (48%), Gaps = 46/358 (12%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-----------------SHPYELEITALLENP 90
+PQ FK + DNS P+ KEK + +HPYE E+
Sbjct: 185 RPQLMFKDKI-DNSSKPWMPRIKEKPNSLKPLALYIEEGEHGEVFNHPYEFELDKF---Q 240
Query: 91 RPEFDFSN------VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFL 144
PE LD R FV+++ + + L L AVD E HS R+F
Sbjct: 241 VPECQLKKRVCVRYKSLDDTR---FVFIDKPTDIQTLLEDLRNHKEIAVDLEHHSYRTFQ 297
Query: 145 GFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV 204
G T L+QIST DYL+DT+ L E+ L F P + KVFHG+D D++WLQRD +YV
Sbjct: 298 GITCLMQISTITTDYLIDTLTLRSELHRLNEIFTKPSILKVFHGADMDILWLQRDLSLYV 357
Query: 205 VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
VN+FDT +A L+ P SLA+L++ YC + NK Q DWR RPLP E+ +YA+ D Y
Sbjct: 358 VNMFDTHQAARQLNLPYLSLAHLIKKYCDIDLNKQFQLADWRIRPLPLELTRYAREDTRY 417
Query: 265 LLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASS 324
LLYI L EL N S N + +S +C + Y K I + E +
Sbjct: 418 LLYIKDMLNNELIDAANGKS-------NILKAVYDQSTEICKRTYVKPIWT---EESCID 467
Query: 325 IFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
++ + S ++ + L WRDL+AR D+S+ +VL ++ +A P
Sbjct: 468 LY------RKSRKSFNNKQMYALVELHRWRDLIAREEDDSIDYVLPKHMMLNIAETLP 519
>gi|347967577|ref|XP_312669.5| AGAP002300-PA [Anopheles gambiae str. PEST]
gi|333468393|gb|EAA07463.5| AGAP002300-PA [Anopheles gambiae str. PEST]
Length = 992
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 160/312 (51%), Gaps = 31/312 (9%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE E+ + E P+ + L+R+ ++V+ +SQL EL L
Sbjct: 238 HPYEFELDRFQPAKHVFERTTPQ-----EPVPLERT-PLMYVDQESQLAELVRELQAAKE 291
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
A+D E HS RS+ GFT L+Q+ST +DY+VD +AL DE+ +L F DP KV HGS
Sbjct: 292 IAIDLEHHSYRSYQGFTCLMQLSTRTKDYIVDALALRDELHVLNEVFTDPKKLKVLHGSV 351
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQRD +Y+VN+FDT +A VL + L +LL+ YC + T+K Q DWR RP+
Sbjct: 352 SDIEWLQRDLGLYLVNMFDTGEAARVLQFSRIGLQFLLKHYCNIDTDKAFQLADWRIRPI 411
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P ++YA+ D HYLLYI + EL ++G DK F +C Q Y
Sbjct: 412 PENFIEYARKDTHYLLYIYDRMRNELLEKGESLLQTVYDKSTF----------MCKQRYQ 461
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K + E +I+ R R + WRD +AR+ DES +VL
Sbjct: 462 KPTMN---EDTVMNIYRR------SRYVFDHRQMYAFREVLYWRDQIARLEDESPGYVLP 512
Query: 371 DQAIIALANKAP 382
+ +A+K P
Sbjct: 513 QHMALDIASKLP 524
>gi|349581166|dbj|GAA26324.1| K7_Rrp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 733
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 176/377 (46%), Gaps = 53/377 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L N +K VL SR + Y+K P
Sbjct: 365 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSE 414
Query: 321 AASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q + A
Sbjct: 415 VYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLLAA 471
Query: 377 LANKAPANRTDVYTTIA 393
L P TDV ++
Sbjct: 472 LVAYTP---TDVIGVVS 485
>gi|367017047|ref|XP_003683022.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
gi|359750685|emb|CCE93811.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
Length = 735
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 178/375 (47%), Gaps = 52/375 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG-------------------SHPYELEI----- 83
KPQ NFK + + PF KEK + PYE EI
Sbjct: 131 KPQLNFKNPVNNTEIQPFVPLLKEKPFALRPLISDIVPGNDAVPEHYAQPYEYEIEHQEY 190
Query: 84 ---TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+ P P + + +WV+ L + + L AVD E H
Sbjct: 191 GESVIVKSEPIPSKPWETTEA--------LWVDNIEVLKTMISDLKSVTEIAVDLEHHDY 242
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYL+DTIAL D++ IL FA+P + KVFHG+ D++WLQRD
Sbjct: 243 RSYYGIVCLMQISTRERDYLIDTIALRDDLQILNEVFANPKILKVFHGAFMDIIWLQRDL 302
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV+LFDT A + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 303 GLYVVSLFDTFHASRAIGLPRHSLAYLLEKFANFKTSKKYQLADWRLRPLSKAMNAYARA 362
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L L +Q +K VL SR + Y+K P
Sbjct: 363 DTHFLLNIYDQLRNTLIEQ---------NKLAGVLAESRNVAKRRFE-YSKFRPIAPSPT 412
Query: 321 AASSI----FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
I +++L Q SIS ++LV++L WRD +AR DES R+V+ +Q ++
Sbjct: 413 VYCPIDKPDPWKVLMFQ---YSISPNREELVKKLYDWRDTIARRDDESPRYVMPNQLLVE 469
Query: 377 LANKAPANRTDVYTT 391
LA +AP +V +
Sbjct: 470 LARQAPTEPINVISV 484
>gi|392296333|gb|EIW07435.1| Rrp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 733
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 176/377 (46%), Gaps = 53/377 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L N +K VL SR + Y+K P
Sbjct: 365 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSE 414
Query: 321 AASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q + A
Sbjct: 415 VYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLVARRDDESPRFVMPNQLLAA 471
Query: 377 LANKAPANRTDVYTTIA 393
L P TDV ++
Sbjct: 472 LVAYTP---TDVIGVVS 485
>gi|410081706|ref|XP_003958432.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
gi|372465020|emb|CCF59297.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
Length = 735
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 164/321 (51%), Gaps = 33/321 (10%)
Query: 76 SHPYELEIT------ALLE--NPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
+HPYE EI ++L+ P P +S + VWV+ LN + N + K
Sbjct: 180 AHPYEYEIDNQPYNDSILQVREPIPSKSWSETE--------GVWVDNVESLNHMLNDIKK 231
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
A+D E H R++ G L+QIST + DYLVDTIAL +++ +L F DP V KV H
Sbjct: 232 YTEIAIDLEHHDYRTYYGIVCLMQISTRETDYLVDTIALRNDLKVLNEVFTDPSVVKVLH 291
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +Y+V+LFDT A L P+ SLAYLLE + T+K Q DWR
Sbjct: 292 GAFMDIIWLQRDLGLYIVSLFDTFHASRALGFPRHSLAYLLEEFANFKTSKKYQLADWRV 351
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL M YA+ D H+LL I L N +K VL SR +
Sbjct: 352 RPLSKAMTAYARADTHFLLNIYDQL---------RNRLVETNKLVGVLNESRNVAKRRFE 402
Query: 308 VYTKEIESYPGEAAASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDE 363
Y+K P S++ +R L Q +I S +DL++ L WRD++AR DE
Sbjct: 403 -YSKFRPRVPSPNVYSALEKEDPWRTLMFQ---YNIPSEREDLLKGLFEWRDMIARRDDE 458
Query: 364 SLRFVLSDQAIIALANKAPAN 384
S R+++ +Q ++ L P +
Sbjct: 459 SPRYIMPNQLMVTLVAYTPTD 479
>gi|393910372|gb|EFO27811.2| 3'-5' exonuclease [Loa loa]
Length = 844
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 195/409 (47%), Gaps = 59/409 (14%)
Query: 14 ASLAAISILFTRQQRRRRKLNQCPQYS---------CYLQSEPKPQHNFKRVLADNSYSP 64
++ A+ LF +Q R L + P Y L S+ KPQ F + DNS++
Sbjct: 130 STAASEQTLFEKQGRYTALLRRLPGYKDKLSSSAAVPLLTSKEKPQVVFG-IEVDNSFAE 188
Query: 65 FKHANKEKSSGS------------------------------HPYELEITALLENPRPEF 94
FK +EK HPY E+ + P +
Sbjct: 189 FKPKLREKHHAMENLVKNLQIVDNDNDIAISTMWRNDQGISLHPYYKELHHF-KIPTRQL 247
Query: 95 DFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIS 153
V SD+ V+V+T +L L + L+KE F+VD E ++ RSFLG T L+QIS
Sbjct: 248 TVGMVQSLKALSDTELVYVDTVEKLRNLRDILNKEQEFSVDLEHNAQRSFLGLTCLMQIS 307
Query: 154 TEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKA 213
T + DY++D L +++ IL F DP + KVFHG+D+D++WLQRDF IYVVN+FDT KA
Sbjct: 308 TRQTDYIIDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDTYKA 367
Query: 214 CEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLV 273
VL+ + S +L++T C +K Q+ DWR RPL YA++D HYLL+ L
Sbjct: 368 MRVLNYSKFSYQHLVQTCCNHTLDKKFQKADWRLRPLTGAHKTYARSDTHYLLHCYDQLR 427
Query: 274 AELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
+L QG D N + S CL VY K + G + +LL G+
Sbjct: 428 IKLLDQG-------DAAGNLLEYVYNESAQTCLTVYKKPVFESDG-------YEKLLVGR 473
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
++S Q + L WRD AR DES ++VL ++ +A P
Sbjct: 474 ---KPLNSRQQFALAALWKWRDERARADDESPQYVLPCHMLLQIAEVLP 519
>gi|323335702|gb|EGA76985.1| Rrp6p [Saccharomyces cerevisiae Vin13]
Length = 733
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 176/377 (46%), Gaps = 53/377 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L N +K VL SR + Y+K P
Sbjct: 365 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSE 414
Query: 321 AASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q + A
Sbjct: 415 VYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLLAA 471
Query: 377 LANKAPANRTDVYTTIA 393
L P TDV ++
Sbjct: 472 LVAYTP---TDVXGVVS 485
>gi|366995964|ref|XP_003677745.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
gi|342303615|emb|CCC71396.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
Length = 755
Score = 186 bits (471), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 176/374 (47%), Gaps = 60/374 (16%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLEN-------PRP---EFDFS 97
KPQ F + + PF KEK P E + + E+ P+P E D
Sbjct: 134 KPQLKFTTPIDNTESHPFIPLLKEKPFALKPLEESMQMIPEDETSPMHYPQPYEYEIDHQ 193
Query: 98 NV-DLDLQRSDSF----------VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
DL LQ+ D +WV+T SQL + L AVD E H R++ G
Sbjct: 194 EYNDLILQKKDPIPSTSWTDNEPIWVDTVSQLQSIMPDLEASTEIAVDLEHHDYRTYYGI 253
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
T L+QIST K DYL+DT+AL +++ IL FA+P + KVFHG+ D++WLQRD +YVV
Sbjct: 254 TCLMQISTRKNDYLIDTLALREDLQILNNVFANPMITKVFHGAFMDIIWLQRDLGLYVVG 313
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A + P+ SLAYLLE + T+K Q DWR RPL M YA+ D H+LL
Sbjct: 314 LFDTFHASRAMGLPKHSLAYLLEKFAQFKTSKKYQLADWRIRPLSKAMHAYARADTHFLL 373
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
I + NS +K VL+ SR V + E SS
Sbjct: 374 NIFDQM---------RNSLIEQNKLAGVLKESR-------NVAKRRFE-------YSSFR 410
Query: 327 FRLLNGQGGVSS----------------ISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
++L G V S I + L++ L WRD +AR DES RFV+
Sbjct: 411 PKVLQTNGLVYSPIEKDDPWKTIMFQYNIPPQKEPLLKELYQWRDKIARRDDESPRFVMP 470
Query: 371 DQAIIALANKAPAN 384
+Q +++L P +
Sbjct: 471 NQLLVSLVAYTPID 484
>gi|312066427|ref|XP_003136265.1| 3'-5' exonuclease [Loa loa]
Length = 845
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 195/409 (47%), Gaps = 59/409 (14%)
Query: 14 ASLAAISILFTRQQRRRRKLNQCPQYS---------CYLQSEPKPQHNFKRVLADNSYSP 64
++ A+ LF +Q R L + P Y L S+ KPQ F + DNS++
Sbjct: 130 STAASEQTLFEKQGRYTALLRRLPGYKDKLSSSAAVPLLTSKEKPQVVFG-IEVDNSFAE 188
Query: 65 FKHANKEKSSGS------------------------------HPYELEITALLENPRPEF 94
FK +EK HPY E+ + P +
Sbjct: 189 FKPKLREKHHAMENLVKNLQIVDNDNDIAISTMWRNDQGISLHPYYKELHHF-KIPTRQL 247
Query: 95 DFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIS 153
V SD+ V+V+T +L L + L+KE F+VD E ++ RSFLG T L+QIS
Sbjct: 248 TVGMVQSLKALSDTELVYVDTVEKLRNLRDILNKEQEFSVDLEHNAQRSFLGLTCLMQIS 307
Query: 154 TEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKA 213
T + DY++D L +++ IL F DP + KVFHG+D+D++WLQRDF IYVVN+FDT KA
Sbjct: 308 TRQTDYIIDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDTYKA 367
Query: 214 CEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLV 273
VL+ + S +L++T C +K Q+ DWR RPL YA++D HYLL+ L
Sbjct: 368 MRVLNYSKFSYQHLVQTCCNHTLDKKFQKADWRLRPLTGAHKTYARSDTHYLLHCYDQLR 427
Query: 274 AELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
+L QG D N + S CL VY K + G + +LL G+
Sbjct: 428 IKLLDQG-------DAAGNLLEYVYNESAQTCLTVYKKPVFESDG-------YEKLLVGR 473
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
++S Q + L WRD AR DES ++VL ++ +A P
Sbjct: 474 ---KPLNSRQQFALAALWKWRDERARADDESPQYVLPCHMLLQIAEVLP 519
>gi|151945630|gb|EDN63871.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190407342|gb|EDV10609.1| exosome complex exonuclease RRP6 [Saccharomyces cerevisiae RM11-1a]
gi|207341289|gb|EDZ69386.1| YOR001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274006|gb|EEU08922.1| Rrp6p [Saccharomyces cerevisiae JAY291]
gi|259149485|emb|CAY86289.1| Rrp6p [Saccharomyces cerevisiae EC1118]
Length = 733
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 176/377 (46%), Gaps = 53/377 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L N +K VL SR + Y+K P
Sbjct: 365 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSE 414
Query: 321 AASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q + A
Sbjct: 415 VYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLLAA 471
Query: 377 LANKAPANRTDVYTTIA 393
L P TDV ++
Sbjct: 472 LVAYTP---TDVIGVVS 485
>gi|6324574|ref|NP_014643.1| Rrp6p [Saccharomyces cerevisiae S288c]
gi|14195186|sp|Q12149.1|RRP6_YEAST RecName: Full=Exosome complex exonuclease RRP6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|1150996|gb|AAC49480.1| hypothetical protein UNC733 [Saccharomyces cerevisiae]
gi|1420088|emb|CAA99189.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814890|tpg|DAA10783.1| TPA: Rrp6p [Saccharomyces cerevisiae S288c]
Length = 733
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 176/377 (46%), Gaps = 53/377 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L N +K VL SR + Y+K P
Sbjct: 365 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSE 414
Query: 321 AASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q + A
Sbjct: 415 VYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLLAA 471
Query: 377 LANKAPANRTDVYTTIA 393
L P TDV ++
Sbjct: 472 LVAYTP---TDVIGVVS 485
>gi|429849634|gb|ELA24996.1| exosome complex exonuclease [Colletotrichum gloeosporioides Nara
gc5]
Length = 908
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 173/333 (51%), Gaps = 40/333 (12%)
Query: 77 HPYELEITALLENPRPEFDFSNVD-LDLQRSDSF--VWVETKSQLNELANALSKEFFFAV 133
HPYE EI LE P+ + + + Q D WV+T + E+ L K AV
Sbjct: 232 HPYEAEI---LEAKYPDRVYQQAEPIPWQPVDKTEATWVDTFEGVLEMLEELKKAKEIAV 288
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDND 192
D E H R+++G T+L+QIST ++D++VDT+ ++ +L FADP + KVFHGS D
Sbjct: 289 DLEHHDFRTYVGLTSLMQISTREKDWVVDTLKPWRQQLQVLNQVFADPNIVKVFHGSYMD 348
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +YV LFDT ACE L PQKSLA+LL + +K Q DWR RPL
Sbjct: 349 IIWLQRDLGLYVNGLFDTFYACEALHYPQKSLAFLLSKFANFDADKRYQMADWRMRPLSP 408
Query: 253 EMLQYAQTDAHYLLYIAKCLVAEL---KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
EML YA++D HYLLY+ + EL +GN + N++ TV +
Sbjct: 409 EMLYYARSDTHYLLYVYDKVRNELVMKSDRGNPGT-------NYI-------ETVLQKSK 454
Query: 310 TKEIESYPGEAAASSIFFRLLNGQG-----GV-----SSISSVTQDLVRRLCAWRDLMAR 359
++ + Y GE F ++G+G G+ + S + R + AWRD +AR
Sbjct: 455 SQSLSRYEGE------HFDPVSGKGPKGWYGLLLKHPAPFSGQQFAVYRAVWAWRDEVAR 508
Query: 360 VHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
DES +VL + I +A + P + ++ I
Sbjct: 509 REDESTAYVLPNAIIGDIAKRMPPDAKALHALI 541
>gi|74187922|dbj|BAE37100.1| unnamed protein product [Mus musculus]
Length = 497
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 150/259 (57%), Gaps = 30/259 (11%)
Query: 71 EKSSGSHPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ ++L+ P+P+ L R+ S L+EL
Sbjct: 250 EQDMFAHPYQYELDHFTPPQSVLQRPKPQ---------LYRAVGETPCHLVSSLDELVE- 299
Query: 125 LSKEFF----FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+++ FAVD E HS RSFLG T L+QIST ED++VDT+ L ++ IL DP
Sbjct: 300 LNEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDP 359
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ KVFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQY 419
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR 300
Q DWR RPLP EML YA+ D HYLLYI + EL ++GN + V + R
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---R 472
Query: 301 SNTVCLQVYTKEI---ESY 316
S +CL+ + K I ESY
Sbjct: 473 SRDICLKKFVKPIFTDESY 491
>gi|310792006|gb|EFQ27533.1| 3'-5' exonuclease [Glomerella graminicola M1.001]
Length = 882
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 184/367 (50%), Gaps = 32/367 (8%)
Query: 48 KPQHNFKRVLADNS-YSPF----KHAN---------KEKSSG----SHPYELEITALLEN 89
KPQ +F R++ +N+ + P HA E G HPYE EI LE
Sbjct: 142 KPQLHFTRIVDNNTTWKPIITEKPHATVPLEKSLVTSETDDGFIQYKHPYETEI---LEA 198
Query: 90 PRPEFDFSNVD-LDLQ--RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
P+ + + + Q + +V+T + E+ L K AVD E H R+++G
Sbjct: 199 KYPDRVYEQAEPIPWQPVETTEATYVDTYEGVLEMLEDLKKANEIAVDLEHHDFRTYVGL 258
Query: 147 TALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
T+L+QIST ++D++VDT+ +++ +L FADP + KVFHG+ D++WLQRD +YV
Sbjct: 259 TSLMQISTREKDWIVDTLKPWREQLQVLNEVFADPSIIKVFHGAFMDMVWLQRDLGLYVN 318
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
LFDT ACEVL PQKSLA+LL+ + +K Q DWR RPL EML YA++D HYL
Sbjct: 319 GLFDTGMACEVLHYPQKSLAFLLKKFVNFDADKKYQLADWRVRPLSEEMLYYARSDTHYL 378
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI 325
LYI + EL + + + D ++ ++S T+ L Y E
Sbjct: 379 LYIYDKMRNELVMKSDRGNPSTD----YIEATLQKSKTLSLSRYGGETFDPKTGKGNKGW 434
Query: 326 FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+ LL S + R + AWRD +AR DES FV+ + I +A P +
Sbjct: 435 YNTLLRHPMPFSGQQFA---VYRAIWAWRDEVARREDESTPFVMPNAIIGDIAKHMPPDA 491
Query: 386 TDVYTTI 392
++ I
Sbjct: 492 KALHALI 498
>gi|358058978|dbj|GAA95376.1| hypothetical protein E5Q_02030 [Mixia osmundae IAM 14324]
Length = 768
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 167/338 (49%), Gaps = 24/338 (7%)
Query: 73 SSGSHPYELEITALLENPRPE---FDFSNVDLDLQRSDSFVWVETKSQLNELANALSK-- 127
+S S+PY EI AL P+ + S +D S F +V+T QL+ L L +
Sbjct: 180 TSESNPYSHEIEALPLLASPDNLPSEISKKAIDSFSSTPFTYVDTAEQLDRLLQELKRPD 239
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA--LHDEISILQPFFADPGVCKV 185
A+D E H RS++GF L+QIST D++VDT+ + D + L FADP KV
Sbjct: 240 HAEIAIDLEHHDFRSYVGFVCLMQISTRSHDWIVDTLVSEVRDRLESLNEVFADPAKVKV 299
Query: 186 FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDW 245
HG+ +DV+WLQRDF +Y+VNLFDT A VLS Q+SLA LL Y +K Q DW
Sbjct: 300 MHGAQSDVIWLQRDFGLYIVNLFDTYHATVVLSYGQRSLASLLTKYTHFVPDKRYQLADW 359
Query: 246 RQRPLPAEMLQYAQTDAHYLL----YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRS 301
R RPLP EM+ YA++D HYLL ++ + L+A E++ D + RRS
Sbjct: 360 RLRPLPQEMIDYARSDTHYLLNIYDHLRRALIATKLDPTPEHAL--DGSETLLQRVDRRS 417
Query: 302 NTVCLQVYTKEIESYPGEAAASSI--FFRLLN---------GQGGVSSISSVTQDLVRRL 350
V Q Y Y A+ R++N +G SS R
Sbjct: 418 RIVASQAYHGSDYDYESGLGANGWRGLVRVMNKGAEYRVNLAKGETSSGRGPEFAAFRAA 477
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+WRD +AR DES R+++S + L P DV
Sbjct: 478 HSWRDQLARELDESPRYIMSHHLVCRLGTVRPTRPADV 515
>gi|118372761|ref|XP_001019575.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89301342|gb|EAR99330.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 881
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 168/324 (51%), Gaps = 37/324 (11%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLD---------LQRSDSFVWVETKSQLNELANALSK 127
HPY EI EN F+FS L + + V+V+ + L+E+ +L +
Sbjct: 211 HPYAYEI----EN----FNFSEQQLQTDNIIVQEPISLKEELVFVDKEDILDEMIESLKQ 262
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
A+D E HS RSF G T L+QIS+ +DY+VD ++ + L D + KV H
Sbjct: 263 CSEVAIDLEHHSYRSFNGITCLMQISSRTKDYIVDVFSVWKSLHKLNAVTTDKNIVKVLH 322
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+D D+ WLQRDF IY+VNLFDT +A LS P +LAYLL++ V T+K Q DWR
Sbjct: 323 GADMDIQWLQRDFGIYIVNLFDTGQAARTLSMPSYALAYLLQSISKVPTDKKYQLADWRI 382
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKC----LVAELKQQGNENSYCPDDKFNFVLEASRRSNT 303
RPLP EM+ YA++D HYLL I LV++ QQG S+ F+ +S
Sbjct: 383 RPLPREMISYARSDTHYLLSIYDNLRIQLVSKALQQGQNASH-------FIESVLNKSRA 435
Query: 304 VCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDE 363
+CL+ Y K I + +L Q + +S +++RL WR MA +DE
Sbjct: 436 ICLKKYVKPI-------LDDEKYHSILQNQRII--LSDRKFRILKRLLEWRYKMAAKYDE 486
Query: 364 SLRFVLSDQAIIALANKAPANRTD 387
+ FVL++ + + N+ P + +
Sbjct: 487 NPTFVLANDILFNIVNRLPQTQKE 510
>gi|170575788|ref|XP_001893385.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158600662|gb|EDP37784.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 847
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 199/412 (48%), Gaps = 62/412 (15%)
Query: 14 ASLAAISILFTRQQRRRRKLNQCPQYS------------CYLQSEPKPQHNFKRVLADNS 61
+++A+ LF RQ R L + P Y L S+ KPQ F + DNS
Sbjct: 130 STVASEQTLFERQGRYAALLRRLPGYKEKLSSPAITTAVPLLTSKEKPQIVFG-IEVDNS 188
Query: 62 YSPFKHANKEK------------------------------SSGSHPYELEITALLENPR 91
++ FK KEK + HPY E+ + P
Sbjct: 189 FAEFKPKLKEKHHAVENFVKNLQIVDCDNDGNQSTMWHNDQGTNLHPYHSELNHF-KIPG 247
Query: 92 PEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALI 150
+ V+ SD+ V+V+T +L L + L+KE F+VD E ++ RSFLG T L+
Sbjct: 248 RQLTIGVVEPLKALSDTELVYVDTLEKLRSLRDVLNKEQEFSVDLEHNAQRSFLGLTCLM 307
Query: 151 QISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT 210
QIST + DY++D L +++ IL F DP + KVFHG+D+D++WLQRDF IYVVN+FDT
Sbjct: 308 QISTRQMDYIIDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDT 367
Query: 211 AKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
KA VL+ + S +L++T C +K Q+ DWR RPL YA++D HYLL+
Sbjct: 368 YKAMRVLNFSKFSYQHLVQTCCNHTLDKKFQKADWRLRPLTIAHKTYARSDTHYLLHCYD 427
Query: 271 CLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLL 330
L L Q N ++ FV S ++ CL VY K G + +LL
Sbjct: 428 QLRKRLLSQEN----AANNLLEFVYNESAQT---CLTVYKKPKFESDG-------YEKLL 473
Query: 331 NGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
G+ ++S Q + L WRD AR DES ++VL ++ +A P
Sbjct: 474 VGR---KPLNSRQQFALAALWKWRDERARTDDESPQYVLPCHMMLQIAEVLP 522
>gi|322700217|gb|EFY91973.1| exosome complex exonuclease Rrp [Metarhizium acridum CQMa 102]
Length = 831
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 191/395 (48%), Gaps = 44/395 (11%)
Query: 77 HPYELEITALLENPRPEFDFSNVD-LDLQRSDSF--VWVETKSQLNELANALSKEFFFAV 133
HPYE EI+ + PE+ F D + Q DS WV+T + E+ L K AV
Sbjct: 191 HPYETEISNMK---YPEWVFQKRDPMPSQPPDSTKATWVDTYEGVLEMLQELRKAKEIAV 247
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDND 192
D E H R++ G L+Q+ST +D++VDT+ ++ +L FA+P + KVFHG+ D
Sbjct: 248 DLEHHDFRTYTGLVCLMQVSTRDQDWIVDTLQPWRHKLEVLNDVFANPSIVKVFHGAYMD 307
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +YV LFDT AC++L+ P KSLA+LL + G +K Q DWR RP+P
Sbjct: 308 MVWLQRDLGLYVNGLFDTYFACDLLNYPGKSLAFLLSKFVGFDADKQYQLADWRIRPIPE 367
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY-TK 311
EML YA++D HYLLYI + EL + +++ D + +++ +A RS + L +
Sbjct: 368 EMLYYARSDTHYLLYIFDNVRNELIEASDKS----DPEKDYINQALERSRELALSRHENP 423
Query: 312 EIESYPGEAAAS--SIFFR----LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
+ GE A + F+ LNG+ + + L WRD AR DES
Sbjct: 424 DYNETTGEGARGWYNYVFKHSHLALNGEQF---------SIFKALWKWRDETARQEDESP 474
Query: 366 RFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQ 425
FVL + +A P D L S LP +P+ + L+D+ +
Sbjct: 475 NFVLGATNVTEIARVNPP----------------DVKALHSLLPLTAPLARARLNDIWAR 518
Query: 426 VCNNVENLDDILLANLQKCLGPNGSCPLSVFNYVL 460
V + L L L P + V + L
Sbjct: 519 V-QEAKTLGGPSLMQFFTTLAPESTIKSKVPKFAL 552
>gi|428671950|gb|EKX72865.1| 3'-5' exonuclease domain containing protein [Babesia equi]
Length = 742
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 172/338 (50%), Gaps = 38/338 (11%)
Query: 64 PFKHANKEKSSGSHPYELEITAL---------------LENPRPEFDFSNVDLDLQRSDS 108
P+ + + S HPY E+ AL + F ++ D +R
Sbjct: 262 PYSYLHSGFPSFQHPYSAELNALNWSEDTTLHSHTGKKITGGGTLFKMTD-DTIYERECK 320
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ V+ L ++ L KE AVD E HS +F GF L+Q S+ KED++VD +
Sbjct: 321 YTLVDDVKGLKKMIATLKKEKIIAVDVEHHSEETFRGFVCLVQFSSSKEDWIVDPFKIFG 380
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYL 227
+++L DP + KVFHGSDND++WLQRDF +YVVN+FDT A EVL P ++SL YL
Sbjct: 381 SMNLLNEVMTDPEILKVFHGSDNDIIWLQRDFGVYVVNMFDTKAAAEVLKVPGKRSLDYL 440
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL--VAELKQQGNENSY 285
L CGV +K Q DWR+RPLP EML+YA D HYL+ + L +A + G E
Sbjct: 441 LMNLCGVRIDKSYQTADWRKRPLPPEMLKYACGDTHYLIKLYTILKNLALGMEDGREK-- 498
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGG--VSSISSVT 343
+++ + +C + Y+ E P A + R + + G V ++ ++
Sbjct: 499 --------IIQIMKNGKHICQRQYS---EKNPKLIAMA----RSIGNKYGIPVDKLNRIS 543
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKA 381
+L+ L +R++ AR DES +LSD+ I + +A
Sbjct: 544 YNLLFNLLVFRNIAARTLDESESLLLSDRNIATIVRRA 581
>gi|193697404|ref|XP_001951643.1| PREDICTED: exosome component 10-like [Acyrthosiphon pisum]
Length = 739
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 175/354 (49%), Gaps = 37/354 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS------------------HPYELEITALLEN 89
+PQ FK + DN PFK K + HPY+LE+ +
Sbjct: 131 RPQIKFK-IKVDNRPVPFKPLLTSKPNSKIPLDLCLETNEDGIMFYKHPYQLELEEF-KV 188
Query: 90 PRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P S D+ FV V T+ QLN + + L A+D E HS R++ GFT
Sbjct: 189 PVEHLKVSTAVKPASLEDTPFVEVYTEEQLNLMVSHLITVNELAIDLEAHSYRTYQGFTC 248
Query: 149 LIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLF 208
L+QIST DY++DT+ L D++ +L F +P V KVFHG+D+D+ WLQRD +YVVN+F
Sbjct: 249 LMQISTRNADYIIDTLYLRDKLHVLNEIFTNPAVVKVFHGADSDIPWLQRDLGLYVVNMF 308
Query: 209 DTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
DT +A ++L+ +K L +LL+ YC V +K Q DWR RPL E + YA+ D HYLLY+
Sbjct: 309 DTYQAAKILNFSRKGLEFLLKHYCNVDADKTFQLYDWRTRPLSTEAIFYARCDTHYLLYV 368
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
+ +L ++ N++ +RS VC Y I + +
Sbjct: 369 YDMIKKDLMAMST-------NQCNYIELVFQRSADVCKSRYEVNILRDDSHLSMYKRSKK 421
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ + Q + ++ L AWRD +AR DES ++L + ++ ++ P
Sbjct: 422 MFDIQQMYA---------LKHLYAWRDKLARELDESPGYILPNHMLLKISEMLP 466
>gi|195451328|ref|XP_002072866.1| GK13832 [Drosophila willistoni]
gi|194168951|gb|EDW83852.1| GK13832 [Drosophila willistoni]
Length = 913
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 180/360 (50%), Gaps = 47/360 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALLE 88
+PQ FK ++ +N+ +PF +EK S HPYE E+ E
Sbjct: 204 RPQLQFKELIDNNAQNPFLPRLREKPNSLKPLALLPEYNEAGNIQSYLHPYEFELLKF-E 262
Query: 89 NPRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P+ + + +L ++ + V+ +L + LS+ A+D E HS R+F+G T
Sbjct: 263 PPQGQMQTQSPELPASMGNTELMLVDNLEKLQQAVKELSEASQIAIDVEHHSYRTFMGIT 322
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+Q+ST +DY+ DT+ L +++ +L DP K+ HG+D D+ WLQRD +Y+VN+
Sbjct: 323 CLVQMSTCSKDYIFDTLVLREDMQLLNLVMTDPKKLKILHGADLDIEWLQRDLSLYIVNM 382
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP E++ YA+ D HYL+Y
Sbjct: 383 FDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADWRMRPLPQELINYARQDTHYLIY 442
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE---IESYPGEAAASS 324
+ +CL +L + N + + + S VC + YTK +S+ +
Sbjct: 443 VYQCLTNDLLKLDNGHQ-------QILRSVYQMSTEVCRKRYTKPHIGPDSHLDLVRKTK 495
Query: 325 IFF--RLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
F R L+ +R L WRD AR DES +V+ + ++ +A P
Sbjct: 496 QIFDNRQLHA--------------LRGLFEWRDTTARQEDESYGYVMPNHMMLQIAESLP 541
>gi|365763245|gb|EHN04775.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 733
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 180/379 (47%), Gaps = 57/379 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLXNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGN------ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIE 314
D H+LL I L +L + E+ +F + + R T +VY+
Sbjct: 365 DTHFLLNIYDQLRNKLIESNKLAGVLYESRNVAKRRFEY---SKYRPLTXSSEVYS---- 417
Query: 315 SYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAI 374
P E + +++L Q + V LVR L WRDL+AR DES RFV+ +Q +
Sbjct: 418 --PIEKESP---WKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLL 469
Query: 375 IALANKAPANRTDVYTTIA 393
AL P TDV ++
Sbjct: 470 AALVAYTP---TDVIGVVS 485
>gi|51013151|gb|AAT92869.1| YOR001W [Saccharomyces cerevisiae]
Length = 733
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 177/378 (46%), Gaps = 55/378 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 131 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 190
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 191 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 244
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 245 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 304
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M YA+
Sbjct: 305 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARA 364
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV-YTKEIESYPGE 319
D H+LL I L N +K VL SR N + Y+K P
Sbjct: 365 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESR--NVAKRRFGYSKYRPLTPSS 413
Query: 320 AAASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q +
Sbjct: 414 EVYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLLA 470
Query: 376 ALANKAPANRTDVYTTIA 393
AL P TDV ++
Sbjct: 471 ALVAYTP---TDVIGVVS 485
>gi|343427876|emb|CBQ71402.1| related to RRP6-Exonuclease component of the nuclear exosome
[Sporisorium reilianum SRZ2]
Length = 921
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 155/296 (52%), Gaps = 21/296 (7%)
Query: 109 FVWVETKSQLNELANALSKEFF--FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA- 165
F W+ TK+QL +L + L + A+D E HS R++ G L+Q+ST D++VDT+A
Sbjct: 323 FQWISTKAQLEQLRDHLDEPRVTEIAIDLEHHSYRTYQGIVCLMQLSTRWGDWIVDTLAD 382
Query: 166 -LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 224
+ + ++L F P KV HG+++DV+WLQRD +Y+VNLFDT A VL P L
Sbjct: 383 EVREHAALLNTSFTHPEKVKVLHGANHDVLWLQRDLGLYLVNLFDTYHATNVLLFPSHGL 442
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
YL+ YC +K Q DWR RPLP EML YA++D H LLYI L EL + G
Sbjct: 443 NYLMARYCRFDADKRYQLADWRIRPLPKEMLYYARSDTHTLLYIYDNLRWELMEAGG--- 499
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSS----- 338
+ + RS V + Y KE GE+ +R G+ + +
Sbjct: 500 ------VAAIRDVFERSKDVAMATYAKEEWDSDGESREGWRSVWRKWGGEAALGTEERKD 553
Query: 339 ISSVTQD--LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
+ + ++ LVR L WRD +AR DES R+VL ++ LA +AP R V I
Sbjct: 554 VRDMKREERLVRVLHRWRDGVAREEDESPRYVLGASHLMMLATRAPTGREGVLACI 609
>gi|448116900|ref|XP_004203126.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359383994|emb|CCE78698.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 757
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 177/371 (47%), Gaps = 59/371 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG----------------------SHPYELEITA 85
KPQ NF+ + +PFK K + PYE EI
Sbjct: 144 KPQDNFRLKVDTTEKNPFKPKISYKPNALISYDESLRLRNPGGCSDFSFYPQPYEYEID- 202
Query: 86 LLENPRPEFDFSN---VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRS 142
P PEF ++ + S WV++K L + N L AVD E H RS
Sbjct: 203 --NQPYPEFVIQKKEPIEPKPWKETSATWVDSKEGLLSMVNELKNSTEIAVDLEHHDYRS 260
Query: 143 FLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
+ G L+QIS + D+LVDT+AL D++ ++ F +P + KVFHG+ D++WLQRD +
Sbjct: 261 YYGLVCLMQISNRQNDWLVDTLALRDDLEVMNEIFTNPQILKVFHGAFMDIIWLQRDLGL 320
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
Y+V+LFDT A + L + SLAYLLET+ T+K Q DWR RPL M YA++D
Sbjct: 321 YIVSLFDTYHAAKKLGLSKFSLAYLLETFAKFKTSKKYQLADWRLRPLSPAMKAYARSDT 380
Query: 263 HYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR--------------SNTVCLQV 308
H+LLYI + +L + D + VL SR+ S T V
Sbjct: 381 HFLLYIYDQMRNKLLEN--------DGRLQEVLYESRQVAKRRFEYTKFRPTSGTTTALV 432
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
Y+ + S P E +S + ++ + + L+ L WRD +A+ DES+R++
Sbjct: 433 YSPLMVSNPREPYSSIM---------SQYNVPAFKKPLIEILFEWRDRVAKQQDESVRYI 483
Query: 369 LSDQAIIALAN 379
+ +Q ++ LA+
Sbjct: 484 MPNQLLVTLAS 494
>gi|402589191|gb|EJW83123.1| 3'-5' exonuclease [Wuchereria bancrofti]
Length = 822
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 197/412 (47%), Gaps = 62/412 (15%)
Query: 14 ASLAAISILFTRQQRRRRKLNQCPQYS------------CYLQSEPKPQHNFKRVLADNS 61
++ A+ LF RQ R L + P Y L S+ KPQ F + DNS
Sbjct: 130 STAASEQTLFERQGRYVALLRRLPGYKEKLSSPAITTAVPLLTSKEKPQIVFG-IEVDNS 188
Query: 62 YSPFKHANKEK------------------------------SSGSHPYELEITALLENPR 91
+ FK KEK + HPY E+ + P
Sbjct: 189 FVEFKPKLKEKHHAVENLVKNLQIVDSDNDGNQSTMWHNDQGTNLHPYHSELNHF-KIPA 247
Query: 92 PEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALI 150
+ V+ SD+ V+V+T +L L + L+KE F+VD E ++ RSFLG T L+
Sbjct: 248 RQLTIGVVEPLKPLSDTELVYVDTVEKLRNLRDVLNKEQEFSVDLEHNAHRSFLGLTCLM 307
Query: 151 QISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT 210
QIST + DY++D L +++ IL F DP + KVFHG+D+D++WLQRDF IYVVN+FDT
Sbjct: 308 QISTRQMDYIIDPFPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNMFDT 367
Query: 211 AKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
KA VL+ + S +L++T C +K Q+ DWR RPL YA++D HYLL+
Sbjct: 368 YKAMRVLNFSKFSYQHLVQTCCNHTLDKKFQKADWRLRPLTVAHKTYARSDTHYLLHCYD 427
Query: 271 CLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLL 330
L L Q N ++ FV S ++ CL VY K G + +LL
Sbjct: 428 QLRKRLLGQEN----AANNLLEFVYNESAQT---CLNVYKKPTFESDG-------YEKLL 473
Query: 331 NGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
G+ ++S Q + L WRD AR DES ++VL ++ +A P
Sbjct: 474 VGR---KPLNSRQQFALAALWKWRDERARTDDESPQYVLPCHMMLQIAEVLP 522
>gi|28278907|gb|AAH45429.1| Zgc:55695 protein [Danio rerio]
Length = 500
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 143/243 (58%), Gaps = 17/243 (6%)
Query: 76 SHPYELEITALL--ENPR--PEFD-FSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
SHPY+ E+ L+ EN + PE + +D ++ T L L L+K
Sbjct: 253 SHPYQYELDHLVMPENLKCKPEVQMYKPID-----ETPCQFISTLEDLVALNEKLAKTTE 307
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVD E HS RSFLG T L+QIST +ED+++DT+ L E+ IL F DP + KVFHG+D
Sbjct: 308 FAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNETFTDPAIVKVFHGAD 367
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ WLQ+DF +YVVN+FDT A L+ + SL +LL+ YC V+++K Q DWR RPL
Sbjct: 368 SDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLDHLLKVYCDVSSDKRYQLADWRIRPL 427
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EML+YAQ D HYLLY+ + A+L GN + + + +S + L+ Y
Sbjct: 428 PDEMLKYAQADTHYLLYVYDRVRADLFDGGNGQA-------TLIQQVWTKSRDLSLKKYV 480
Query: 311 KEI 313
K I
Sbjct: 481 KPI 483
>gi|380485396|emb|CCF39387.1| 3'-5' exonuclease [Colletotrichum higginsianum]
Length = 732
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 164/317 (51%), Gaps = 8/317 (2%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI R + + +V+T + ++ L K AVD E
Sbjct: 40 HPYETEIIEAKYPNRVYEQAEPIPWQPVETTEATFVDTYEGVLDMLKDLKKAKEIAVDLE 99
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H R+++G T+L+QIST ++D++VDT+ ++ +L FADP + KVFHG+ D++W
Sbjct: 100 HHDFRTYVGLTSLMQISTREKDWIVDTLKPWRGQLEVLNEVFADPSIVKVFHGAFMDMVW 159
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YV LFDT ACEVL PQKSLA+LL+ + +K Q DWR RPL EML
Sbjct: 160 LQRDLGLYVNGLFDTGMACEVLHYPQKSLAFLLKKFVNFDADKKYQLADWRVRPLSEEML 219
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA++D HYLLYI + EL + + + D ++ A ++S T+ L Y E +
Sbjct: 220 YYARSDTHYLLYIYDKMRNELVMKSDRGNPGSD----YIEAALQKSKTLSLSRYGGETFN 275
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
P S ++ L S + R + AWRD +AR DES FVL + I
Sbjct: 276 -PKTGKGSKGWYNTLLKHP--MPFSGQQFAVYRAIWAWRDEVARREDESTPFVLPNGIIG 332
Query: 376 ALANKAPANRTDVYTTI 392
+A P + ++ I
Sbjct: 333 DIAKHMPPDAKALHALI 349
>gi|357508795|ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
gi|355499701|gb|AES80904.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
Length = 832
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 156/309 (50%), Gaps = 49/309 (15%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISI-LQPFFADPGVCKVFHGS 189
VD E + RSF G T L+QIST ED++VDT+ L D + L+ F DP KV HG+
Sbjct: 312 ITVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLRDVFMDPTKKKVLHGA 371
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D D++WLQRDF IY+ N+FDT +A VL + SL +LL+ +CGV NK Q DWR RP
Sbjct: 372 DRDIVWLQRDFGIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRARP 431
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
LP M++Y + D HYLLYI + +L + E S PDD +LE +RS VC+Q+Y
Sbjct: 432 LPDVMIKYGREDTHYLLYIYDLMRIKLFELSKE-SESPDDP---LLEVYQRSYNVCMQLY 487
Query: 310 TKEIESYPGEAAASSIFFRLLNGQ-----GGVSSISSV--TQDLVRR------------- 349
K++ + + NGQ G + + S+ L+RR
Sbjct: 488 EKDLLTENSFLNIKGLRGAGFNGQQLAVVSGKTMVGSLQPQNTLLRRGKETQANGVPKVL 547
Query: 350 ------------------------LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
L WRD++AR DES ++L ++ I+ +A P
Sbjct: 548 IMVVSDQKNKIVACIASALGFCTGLYEWRDVLARAEDESTGYILPNKVILLIAKHMPVTA 607
Query: 386 TDVYTTIAQ 394
+++ IA+
Sbjct: 608 SNLRRLIAE 616
>gi|424513045|emb|CCO66629.1| exosome component 10 [Bathycoccus prasinos]
Length = 911
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 157/300 (52%), Gaps = 27/300 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+V+ ++ L EL LSK FAVD E HS R++ GFT LIQIST ++D++VD + L
Sbjct: 236 TFVDNENGLEELEGVLSKAPIFAVDLEHHSYRTYRGFTCLIQISTREQDFVVDALRLRHL 295
Query: 170 IS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
I L F + KVFHG+++D++WLQRDF IYVVN+FDT +A +L P LAYLL
Sbjct: 296 IGPALGRHFENEEKLKVFHGANSDMIWLQRDFGIYVVNMFDTGQAARILELPSFGLAYLL 355
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ YCG+ K Q DWR RPL EM+ YA++D H LLY+ L EL +G C
Sbjct: 356 KQYCGIKAEKKYQLADWRLRPLSREMINYARSDTHSLLYVHDRLKQELYAKGGVE--CIQ 413
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEI-----------ESYPGEAAASSIFFRLLNGQGGVS 337
F +S VCL Y ++ +S + S L+ +
Sbjct: 414 SVF-------LKSRDVCLLTYEPQVITDLSYHEDLMKSANASSGGGSGHGNTLSRSAQQA 466
Query: 338 SISS------VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTT 391
+S V Q + L WRD AR +DESL FV+ ++ LA++ P DV +T
Sbjct: 467 QLSQEILKSPVAQAAMEALFKWRDDCARANDESLGFVMPRHLMLRLASEQPKVARDVVST 526
>gi|313233556|emb|CBY09728.1| unnamed protein product [Oikopleura dioica]
Length = 790
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 161/307 (52%), Gaps = 21/307 (6%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDT 135
SHPYE EI + P + + VE+ N + L +E AVD
Sbjct: 226 SHPYEEEIKSC---GVPSASDNVTEYKALDDTPLSVVESSLSFNLMMQELREESELAVDL 282
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
E H RS+ GFT L+QIS+ ++DY++D +A+ +++ L FA+P + K+FHGS ND++W
Sbjct: 283 EHHRYRSYQGFTCLVQISSRQKDYILDPLAVWEDMYKLNEVFANPKIVKIFHGSRNDMLW 342
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRDF +YVVNLFDT A + L +KSL YLL+ YC + +K Q DWR RP+P ML
Sbjct: 343 LQRDFGVYVVNLFDTFFAAKKLDLAKKSLDYLLQHYCKIRLDKRFQLADWRMRPIPPNML 402
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
+YA+ D HYLLY+ L A+L++ +F E R S L Y K I
Sbjct: 403 RYARQDTHYLLYVYDRLRADLEKL----------EFGATREIFRLSREFSLSKYEKPIF- 451
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
GE+ ++ L ++ + L AWRD +AR DES +V+ + ++
Sbjct: 452 --GESD-----YKKLYESKNRKKFNNQQLKALELLYAWRDQIARFEDESTDYVIPNHILL 504
Query: 376 ALANKAP 382
++ P
Sbjct: 505 QVSEILP 511
>gi|453081050|gb|EMF09100.1| 3_5_exonuc-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 782
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 180/358 (50%), Gaps = 26/358 (7%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEF--DFSNVDLDLQR 105
KPQ F V +N PFK + K + P E T P + + + + Q
Sbjct: 137 KPQLLFDHVPTNNDVPPFKPLLETKPHATTPLETAPTLAPGATHPAYAQPYQHEIENYQY 196
Query: 106 SDS-FVW----------------VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
S + W V+T+ L+E+ L + A+D E H RS++G +
Sbjct: 197 PPSIYQWSQPVMYHPFDQTTATLVDTEEALSEMLEELKQAKEIAIDLEHHDSRSYIGIVS 256
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ ++ L FADPG+ KV HG+ D+MWLQRD +Y+V L
Sbjct: 257 LMQISTRDKDWIVDTLKPWRRKLQCLNEVFADPGIIKVLHGAFMDIMWLQRDLGLYIVGL 316
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT A VL +SLA+LL+ + V K Q DWR RPLP E+ YA++D H+LLY
Sbjct: 317 FDTFHAASVLGYTGRSLAFLLKKFANVDAQKQYQTADWRVRPLPTELFDYARSDTHFLLY 376
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I + EL + N P+ + + + + +RS+ LQ Y E Y E + ++
Sbjct: 377 IFDNMRNELIHRSNLE--LPNHEGDKIYDVLQRSSEEALQRY--EYPVYDAELGQGAGWY 432
Query: 328 RLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
RLL+ + + + + R + WRD +AR D+S+ +++ + I ++A P +R
Sbjct: 433 RLLSRTSAMLTKEQFS--VFRAVHQWRDEVAREQDDSVNYIMPNHQIFSIARAMPPSR 488
>gi|206598216|gb|ACI16020.1| exosome subunit Rrp6P [Bodo saltans]
Length = 741
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 184/360 (51%), Gaps = 36/360 (10%)
Query: 48 KPQHNFKRVLADNSYSPFK----HANKEKS---SGSHPYELEITALLENPR----PEFDF 96
+PQ F+ + DNS++ F+ HA+ S +HPY E+ + P P D
Sbjct: 152 RPQLTFETPV-DNSHAKFRATVHHADGSTSLCDVDTHPYA-ELIEQFKVPTLQLLPTEDK 209
Query: 97 SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK 156
+ L+ + +VET L+ L ALS AVD E H RSF G T L+Q+ST
Sbjct: 210 QYLPLE---TTPLTFVETVEGLDALIAALSACREVAVDLEHHDFRSFQGITCLMQLSTRS 266
Query: 157 EDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
EDY+VD + L + L F D + KVFHG+ DV WLQ+DF +YV N+FDT A +
Sbjct: 267 EDYIVDVLRLRSHMHRLNRVFLDTNILKVFHGAKEDVRWLQKDFGLYVANMFDTGIALQT 326
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L P SLA+ ++ +CGV +K Q DWR RP+P+EM+ YA+ D HYLLY+ L A L
Sbjct: 327 LHMPH-SLAFAVDHFCGVRLDKKYQTADWRIRPVPSEMIHYARQDTHYLLYVHDRLKALL 385
Query: 277 KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK---EIESYPGEAAASSIFFRLLNGQ 333
S N ++ + S +CL Y K ++++ EA S+
Sbjct: 386 LHAEGRASVG-----NLLVHVYQDSRRLCLTRYEKPMLDVDTTYREAMGKSL-------- 432
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
GG +S+ +++R + WRD AR DES ++ AI+ +A+K P + ++ A
Sbjct: 433 GG---LSATQLEVLRVVFNWRDQAARDADESPPAIMHASAILQIASKLPTSAKEILACCA 489
>gi|221506253|gb|EEE31888.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1353
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 25/293 (8%)
Query: 109 FVWVETKSQLNELANALSK--EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
V + K +L EL + LS A+D E HS S+ GFT L+Q+ST ++DY++D AL
Sbjct: 461 LVRIAEKEELQELVDELSSGAHSLVAIDLEHHSFHSYRGFTCLLQLSTREKDYIIDPFAL 520
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLA 225
D + +L A+P + K+FHG+D+D++WLQRDF +YVVN+FDT A L+ P SLA
Sbjct: 521 FDHLHVLNTITANPKILKIFHGADSDIIWLQRDFSVYVVNMFDTCVAARALAVPGGASLA 580
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL---KQQGNE 282
LL+TYC V NK Q DWR+RPL EM YA++D HYL +I + +L + G
Sbjct: 581 NLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMKNQLLSKPELGAA 640
Query: 283 NSYCPDDKFNFVLEAS-----------RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLN 331
S F+ LE + RS VCL+++ + P EA A L
Sbjct: 641 LSPSAVTDFDGTLEVTEAGKQIMMFTMERSRDVCLKLHVEAPFDAPAEAEA-----LLKR 695
Query: 332 GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ G+S +S V + L WRD +AR D S + + ++ LA K P +
Sbjct: 696 TRAGLSPLSYV---VFIELLKWRDTLARRLDRSPVSLATPAHLLLLAQKRPTS 745
>gi|71024099|ref|XP_762279.1| hypothetical protein UM06132.1 [Ustilago maydis 521]
gi|46101781|gb|EAK87014.1| hypothetical protein UM06132.1 [Ustilago maydis 521]
Length = 1027
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 166/342 (48%), Gaps = 22/342 (6%)
Query: 63 SPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELA 122
+P+ H SH +NP P + + L F WV TK Q+ +L
Sbjct: 294 NPYHHEIMHADPPSHALSKPDPVAKDNPPPALNEKDPWLSTDAC-PFQWVSTKQQIEQLR 352
Query: 123 NALSKEFF--FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA--LHDEISILQPFFA 178
+ L + A+D E HS R++ G L+Q+ST D+++DT++ + +L F
Sbjct: 353 DHLDEPRVNEIAIDLEHHSYRTYQGIVCLMQLSTRWGDWIIDTLSDDVRQHAELLNSSFT 412
Query: 179 DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 238
+P KV HG+++DV+WLQRD +Y+VNLFDT A VL P L YL+ YC +K
Sbjct: 413 NPDKVKVLHGANHDVLWLQRDLGLYLVNLFDTYHATNVLMFPSHGLNYLMARYCNFDADK 472
Query: 239 FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEAS 298
Q DWR RPLP EML YA++D H LL+I L EL + G + + +
Sbjct: 473 RYQLADWRIRPLPKEMLYYARSDTHTLLFIYDNLRHELMEAGG---------IDAIRQVF 523
Query: 299 RRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSS-----ISSVTQD--LVRRL 350
RS V Y KE GE +R G+ + + +S + ++ LVR L
Sbjct: 524 IRSKQVATATYAKEQWDTDGETREGWRTVWRKWGGEAALGTEHRKEVSQMKKEERLVRAL 583
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
WRD +AR DES R++L ++ LA +AP + V I
Sbjct: 584 HRWRDTVAREEDESPRYILGANNLMMLAARAPTTKQGVLACI 625
>gi|221485391|gb|EEE23672.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1353
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 25/293 (8%)
Query: 109 FVWVETKSQLNELANALSK--EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
V + K +L EL + LS A+D E HS S+ GFT L+Q+ST ++DY++D AL
Sbjct: 461 LVRIAEKEELQELVDELSSGAHSLVAIDLEHHSFHSYRGFTCLLQLSTREKDYIIDPFAL 520
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLA 225
D + +L A+P + K+FHG+D+D++WLQRDF +YVVN+FDT A L+ P SLA
Sbjct: 521 FDHLHVLNTITANPKILKIFHGADSDIIWLQRDFSVYVVNMFDTCVAARALAVPGGASLA 580
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL---KQQGNE 282
LL+TYC V NK Q DWR+RPL EM YA++D HYL +I + +L + G
Sbjct: 581 NLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMKNQLLSKPELGAA 640
Query: 283 NSYCPDDKFNFVLEAS-----------RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLN 331
S F+ LE + RS VCL+++ + P EA A L
Sbjct: 641 LSPSAVTDFDGTLEVTEAGKQIMMFTMERSRDVCLKLHVEAPFDAPAEAEA-----LLKR 695
Query: 332 GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ G+S +S V + L WRD +AR D S + + ++ LA K P +
Sbjct: 696 TRAGLSPLSYV---VFIELLKWRDTLARRLDRSPVSLATPAHLLLLAQKRPTS 745
>gi|237835553|ref|XP_002367074.1| exosome component 10, putative [Toxoplasma gondii ME49]
gi|211964738|gb|EEA99933.1| exosome component 10, putative [Toxoplasma gondii ME49]
Length = 1353
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 25/293 (8%)
Query: 109 FVWVETKSQLNELANALSK--EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
V + K +L EL + LS A+D E HS S+ GFT L+Q+ST ++DY++D AL
Sbjct: 461 LVRIAEKEELQELVDELSSGAHSLVAIDLEHHSFHSYRGFTCLLQLSTREKDYIIDPFAL 520
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLA 225
D + +L A+P + K+FHG+D+D++WLQRDF +YVVN+FDT A L+ P SLA
Sbjct: 521 FDHLHVLNTITANPKILKIFHGADSDIIWLQRDFSVYVVNMFDTCVAARALAVPGGASLA 580
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL---KQQGNE 282
LL+TYC V NK Q DWR+RPL EM YA++D HYL +I + +L + G
Sbjct: 581 NLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMKNQLLSKPELGAA 640
Query: 283 NSYCPDDKFNFVLEAS-----------RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLN 331
S F+ LE + RS VCL+++ + P EA A L
Sbjct: 641 LSPSAVTDFDGTLEVTEAGKQIMMFTMERSRDVCLKLHVEAPFDAPAEAEA-----LLKR 695
Query: 332 GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ G+S +S V + L WRD +AR D S + + ++ LA K P +
Sbjct: 696 TRAGLSPLSYV---VFIELLKWRDTLARRLDRSPVSLATPAHLLLLAQKRPTS 745
>gi|321254177|ref|XP_003192989.1| exosome complex exonuclease RRP6 [Cryptococcus gattii WM276]
gi|317459458|gb|ADV21202.1| Exosome complex exonuclease RRP6 (Ribosomal RNA processing protein
6), putative [Cryptococcus gattii WM276]
Length = 851
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 70 KEKSSGSHPYELEITALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
KE + +HPY E T L P F D V F +V+T + + + L +
Sbjct: 113 KEIRARTHPYYYE-TKHLPYPTSLFIDSKPVPPQSFDETPFEFVDTPEKFHRMVGKLKQA 171
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI--SILQPFFADPGVCKVF 186
AVD E H +RS+ GFT LIQIST + D++VDT++L EI F DP V KVF
Sbjct: 172 KEIAVDLEHHDMRSYSGFTCLIQISTRENDWVVDTLSLRKEIQQDKFGDVFTDPTVVKVF 231
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWR 246
HG+D+D++WLQRDF I+VVNLFDT AC VL PQ+SL+ LL+ YC +K QR DWR
Sbjct: 232 HGADSDIVWLQRDFEIFVVNLFDTYNACVVLGMPQRSLSALLQHYCNFEADKRYQRADWR 291
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC--------------PDDKFN 292
RPLP ML YA++D H+LL+I L L + + S P +
Sbjct: 292 IRPLPDGMLNYARSDTHFLLFIYDNLRNALLHKSSRPSSPAASGTIVLDSAKPNPQEAMR 351
Query: 293 FVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV--SSISSVTQDLVRRL 350
VL+ +S L++Y E +SY E S + L G+ + I + + R L
Sbjct: 352 EVLD---KSAETALKMY--ERDSYDIETGRGSGGW-LAAGKKWLPKGEIEQESGWVWRHL 405
Query: 351 CAWRDLMARVHDESLRFVLSDQAI 374
WRD +AR DES +V+ + +
Sbjct: 406 HDWRDRVAREMDESPFYVMPNNML 429
>gi|350418690|ref|XP_003491936.1| PREDICTED: hypothetical protein LOC100746784 [Bombus impatiens]
Length = 1271
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 165/327 (50%), Gaps = 21/327 (6%)
Query: 60 NSYSPFKHANKEKSSG---SHPYELEITALLE-NPRPEFDFSNVDLDLQRSDSFVWVETK 115
NS P +E +G SHPYE E+ + N + + L+ + V ++
Sbjct: 203 NSLKPLAIYLEEGENGEIFSHPYEYELDMFVPPNDQLKKSVPKKYKPLEET-LLVMIKDP 261
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
S + L L + AVD E HS RSF G T L+QIST DYL+DT++L E+ L
Sbjct: 262 SDIKLLIEDLKRYKEIAVDLEHHSYRSFQGITCLMQISTGDTDYLIDTLSLRSELHELNE 321
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
F + KVFHG+D D+ WLQRD +YVVN+FDT +A + L+ P SLAYLL+ YC V
Sbjct: 322 IFTKSTILKVFHGADLDIQWLQRDLSLYVVNMFDTHQAAKQLNMPYLSLAYLLKHYCNVD 381
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
+K Q DWR RPLP ++++YA+ D HYLLYI L L N + N +
Sbjct: 382 PDKHFQMADWRIRPLPEKLMKYAREDTHYLLYIKDLLRNALIDVAN-------GQINILK 434
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
RS +C + Y K + + + I +R + + ++ L WRD
Sbjct: 435 AVYDRSTEICKKTYIKPVWT----EESCMIMYRKSQKMFNNKQLYA-----LKELHKWRD 485
Query: 356 LMARVHDESLRFVLSDQAIIALANKAP 382
AR D+S+ +VL + ++ +A P
Sbjct: 486 QTARGEDDSIAYVLPNHMLLNIAETLP 512
>gi|406606562|emb|CCH42061.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 744
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 188/388 (48%), Gaps = 77/388 (19%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEI--- 83
KPQ FK + ++ PFK KEK + PYE+EI
Sbjct: 135 KPQKFFKTPIDNSESHPFKPLLKEKPNAMVPFQETFILTTEEENDPAHYKQPYEIEILNQ 194
Query: 84 ---TALLE--NPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQH 138
+ +LE +P P D+ + +WV+T +LN++ L AVD E H
Sbjct: 195 EYNSKILEKSDPIPSKDWQGTEP--------IWVDTIEELNKMHKDLQSVSEIAVDLEHH 246
Query: 139 SLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQR 198
RS+ G L+QIST +D+L+DT+AL +++ IL F DP + KVFHG+ D++WLQR
Sbjct: 247 DYRSYYGLVCLMQISTRDQDWLIDTLALREDLKILNSVFTDPKITKVFHGAFMDIIWLQR 306
Query: 199 DFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYA 258
D +Y+V+LFDT A L P+ SLAYLLE + T+K Q DWR RPL M YA
Sbjct: 307 DLGLYIVSLFDTYHASRQLGFPKHSLAYLLERFAHFKTSKKYQLADWRIRPLTGPMKLYA 366
Query: 259 QTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPG 318
++D H+LL I L N ++E+++ +N + ++ +
Sbjct: 367 RSDTHFLLNIFDQLR------------------NMLIESNKLTNVL---FESRNVARRRF 405
Query: 319 EAAASSIFFRLLNGQGGVSSI---------------SSVTQDLVRRLCAWRDLMARVHDE 363
E ++ FR L VS I S+ + +VR L WRD +A+ DE
Sbjct: 406 EYSS----FRPLASTNVVSPIEKPEPWKSLLYQYNLSASREAVVRSLYQWRDQIAKQDDE 461
Query: 364 SLRFVLSDQAIIALANKAPANRTDVYTT 391
S R+V+ +Q +++LA+ P + V ++
Sbjct: 462 SPRYVMPNQLLVSLASLVPTDPAGVLSS 489
>gi|313213333|emb|CBY37160.1| unnamed protein product [Oikopleura dioica]
Length = 689
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 150/271 (55%), Gaps = 18/271 (6%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
VE+ N + L +E AVD E H RS+ GFT L+QIS+ ++DY++D +A+ +++
Sbjct: 259 VESSLSFNLMIQELREESELAVDLEHHRYRSYQGFTCLVQISSRQKDYILDPLAVWEDMY 318
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L FA+P + K+FHGS ND++WLQRDF +YVVNLFDT A + L +KSL YLL+ Y
Sbjct: 319 KLNEVFANPKIVKIFHGSRNDMLWLQRDFGVYVVNLFDTFFAAKKLDLAKKSLDYLLQHY 378
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
C + +K Q DWR RP+P ML+YA+ D HYLLY+ L A+L++ +F
Sbjct: 379 CKIRLDKRFQLADWRMRPIPPNMLRYARQDTHYLLYVYDRLRADLEKL----------EF 428
Query: 292 NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLC 351
E R S L Y K I GE+ ++ L ++ + L
Sbjct: 429 GATREIFRLSREFSLSKYEKPIF---GESD-----YKKLYESKNRKKFNNQQLKALELLY 480
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAP 382
AWRD +AR DES +V+ + ++ ++ P
Sbjct: 481 AWRDQIARFEDESTDYVIPNHILLQVSEILP 511
>gi|357607504|gb|EHJ65543.1| PM-Scl autoantigen-like protein [Danaus plexippus]
Length = 787
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 166/314 (52%), Gaps = 31/314 (9%)
Query: 77 HPYELEI------TALLE--NPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
HPY++E+ T +LE P F S D L ++ET + L +L L+
Sbjct: 190 HPYKIELELYQPPTKVLEPDTEPPTFPKSLEDTPLS------FIETVADLEKLVEHLNTV 243
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHG 188
AVD E HS R++ G T LIQIST + D+++DT+A+ + + L F DP KVFHG
Sbjct: 244 DEIAVDVEHHSYRTYQGITCLIQISTYEGDFIIDTLAVREHVHKLNLAFTDPKKLKVFHG 303
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
++ D++WLQRDF +YVV + DT +A L+ P SL LL YC V +K Q DWR R
Sbjct: 304 AERDIVWLQRDFGVYVVGMIDTHQAARALALPGLSLKSLLMRYCRVDADKRYQLADWRIR 363
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PLP E+ QYA+ D HYLLY+ + + A+L ++ S V E SR +C
Sbjct: 364 PLPDELRQYARVDTHYLLYMWRRMKADLLAISSDGSL-----LRSVFENSRH---ICSLT 415
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
Y KE+ + E++ ++ R S ++ +R L WRD AR DES ++
Sbjct: 416 YNKEVIN---ESSHLKLYVR------SKKSFNTRQMAALRLLYRWRDANARELDESTTYL 466
Query: 369 LSDQAIIALANKAP 382
L + ++ALA P
Sbjct: 467 LPNHMLLALAETLP 480
>gi|156039491|ref|XP_001586853.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980]
gi|154697619|gb|EDN97357.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 173/326 (53%), Gaps = 26/326 (7%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE EI +A+ E P ++ V+ S S +V+T + E+ L
Sbjct: 191 HPYETEILQLQYPSAMFEKAEP-INYLPVE-----STSATFVDTYEGVLEMLEELKGAKE 244
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGS 189
AVD E H RS++G +L+QIST ++D++VDT+ ++ +L FADP + KVFHG+
Sbjct: 245 IAVDLEHHDTRSYVGLVSLMQISTREKDWIVDTLKPWRQQLQVLNEVFADPCIIKVFHGA 304
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D++WLQRD +YVV LFDT AC L SLA+LL+ Y +K Q DWR RP
Sbjct: 305 YMDIVWLQRDLGLYVVGLFDTHYACRRLGLAGGSLAFLLKKYIDFDADKKYQLADWRIRP 364
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD-DKFNFVLEASRRSNTVCL-- 306
LP EM YA+ D H+LLYI L EL N+ P+ + VLE S+ ++ +
Sbjct: 365 LPEEMFFYARADTHFLLYIFDNLRNELIDAS--NTETPETNPMETVLEKSKETSLLRYER 422
Query: 307 QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLR 366
QVY E PG +F L+ + +SS + + + AWRD +AR D+S+
Sbjct: 423 QVYNAESGKGPGG------WFSLIYKTPAL--LSSEQFAVFKAVHAWRDQIARKDDDSIN 474
Query: 367 FVLSDQAIIALANKAPANRTDVYTTI 392
FV+S+ +I LA P + + + I
Sbjct: 475 FVMSNSVVINLAKFMPMDMIALLSII 500
>gi|449304144|gb|EMD00152.1| hypothetical protein BAUCODRAFT_366269 [Baudoinia compniacensis
UAMH 10762]
Length = 774
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 185/356 (51%), Gaps = 24/356 (6%)
Query: 48 KPQHNFKRVLADNSYSPF-------KHA---NKEKSSGSHPYELEITALLENPRPEFDFS 97
KPQ F+ V +N PF HA +E + G HPY+ EI L+ P ++
Sbjct: 136 KPQLLFENVPTNNETGPFLPLLQSKPHAMRPKEESAPGLHPYQSEI---LDYRWPAELYT 192
Query: 98 NVDLDLQ---RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIST 154
+ + + +V+T+ + E+ L + AVD E H LRS++G L+QIST
Sbjct: 193 TAEPSMYTPFEESTATFVDTEDAMYEMLEELKQAKEIAVDLEHHDLRSYVGIVCLMQIST 252
Query: 155 EKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKA 213
+D++VDT+ ++S L FA+P + KV HG+ DV+WLQRD +Y+V LFDT A
Sbjct: 253 RNKDWIVDTLKPWRRKLSCLNEVFANPSILKVLHGAYMDVIWLQRDLGLYLVGLFDTHYA 312
Query: 214 CEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLV 273
C L SLA+LL+ + V K Q DWR RPLP E+L YA++D HYLLYI +
Sbjct: 313 CRALGYAGASLAFLLKKFANVDAQKQYQTADWRIRPLPQELLDYARSDTHYLLYIFDNMR 372
Query: 274 AELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYP-GEAAASSIFFRLLNG 332
EL Q+ D + + + + ++S+ LQ Y + + G+ +++LL
Sbjct: 373 NELVQRSTFGKM--DHEGDKLWDVLQKSSETALQRYEHPVYDFDLGQGTVG--WYKLLAR 428
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+++S + R + WRD +AR D+S +++S+ I ++A P + ++
Sbjct: 429 TS--ATLSKEQFSVFRAVHRWRDNVAREQDDSAHYIMSNHHIFSIAKSMPTTKAEL 482
>gi|195143871|ref|XP_002012920.1| GL23665 [Drosophila persimilis]
gi|194101863|gb|EDW23906.1| GL23665 [Drosophila persimilis]
Length = 903
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 175/364 (48%), Gaps = 55/364 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS-------------------HPYELEITALLE 88
+PQ NFK + ++ +PF KEK + HPYE E+ L
Sbjct: 197 RPQMNFKTPVDNSDQNPFVPRLKEKPNSLKPLALLPEYDEAGNVHAYLHPYEFELMKL-- 254
Query: 89 NPRPEFDFSNVDLDLQR----------SDSFVWVETKSQLNELANALSKEFFFAVDTEQH 138
P E LQR + + V++ +LN+ L + A+D E H
Sbjct: 255 EPSAE--------QLQRQTPLLPAPPAATELMLVDSVEKLNQALEELRRAPHIAIDVEHH 306
Query: 139 SLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQR 198
S R+F+G T L+Q+ST +DY+ D++AL +E+ +L DP K+ HG+D D+ WLQR
Sbjct: 307 SYRTFMGITCLVQMSTRTKDYIFDSLALREEMHVLNLVLTDPKKVKILHGADQDIEWLQR 366
Query: 199 DFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYA 258
D +YVVN+FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP +++ YA
Sbjct: 367 DLSLYVVNMFDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADWRMRPLPQQLIDYA 426
Query: 259 QTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPG 318
+ D HYL+Y+ + + ++ Q S + +E VC + YTK P
Sbjct: 427 RQDTHYLIYVYERMTNDILQAEQGQSQALRTVYQLSME-------VCKKRYTK-----PH 474
Query: 319 EAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
S + + S + +R L WRD AR DES +VL + ++ +A
Sbjct: 475 IGPESHLDL----VRKTKRSFDNRQLHALRGLFQWRDATARQEDESYGYVLPNHMMLQIA 530
Query: 379 NKAP 382
P
Sbjct: 531 ESLP 534
>gi|67537662|ref|XP_662605.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|40741889|gb|EAA61079.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|259482125|tpe|CBF76306.1| TPA: exosome complex exonuclease Rrp6, putative (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1297
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 190/384 (49%), Gaps = 32/384 (8%)
Query: 31 RKLNQCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLEN 89
R+ P Y S+ PKPQ F+ + SPF+ K K P E +T ++
Sbjct: 133 RRAQNFPTIYDYGPSKIPKPQLQFEHQVDPTDTSPFRPLLKTKPHAIEPLEQSLTPSIDA 192
Query: 90 PRPEFDFSNVDLDLQRSDSFVW------------------VETKSQLNELANALSKEFFF 131
P + ++ + S V+ V+T + E+ L
Sbjct: 193 PHGSRNPYETEIRAAKYPSSVYTVSPPIDYLPFETTAATFVDTLDGVKEMLAELKSAREI 252
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSD 190
A+D E H + S+ G +L+QIST ++D++VDT+ +E+ +L FADP + K+FHGS
Sbjct: 253 AIDLEHHDVHSYHGLVSLMQISTREKDWVVDTLKPWREELQMLNEVFADPNILKLFHGSS 312
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D++WLQRD +YVV +FDT A L+ P+KSL YLL + +K Q DWR RPL
Sbjct: 313 MDIIWLQRDLGLYVVGMFDTYHAACALNYPKKSLKYLLHKFVNFEADKQYQMADWRIRPL 372
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P+ M YA++D HYLLYI L EL NS D+ ++VLE +S T LQ Y
Sbjct: 373 PSGMFNYARSDTHYLLYIYDNLRNELLT----NSTPEDNLVDYVLE---KSKTEALQRYE 425
Query: 311 KEI-ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
+ + ++ G+ A ++ L+ + +SS +++ + WRD +AR DE ++ V
Sbjct: 426 RPVYDAATGQGAGG--WYDLMTRSPAI--LSSEQFAVLKAVHEWRDRVAREEDEGVQCVF 481
Query: 370 SDQAIIALANKAPANRTDVYTTIA 393
+ +A P + ++ T++
Sbjct: 482 PKHILFRVAQAMPQDLGTLFRTMS 505
>gi|448119348|ref|XP_004203709.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359384577|emb|CCE78112.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 756
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 165/320 (51%), Gaps = 37/320 (11%)
Query: 77 HPYELEITALLENPRPEFDFSN---VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAV 133
PYE EI P PEF ++ + S W+++K L + + L AV
Sbjct: 195 QPYEYEID---NQPYPEFVIQKKEPIEAQSWKETSATWIDSKDGLLRMVDELRSSTEIAV 251
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDV 193
D E H RS+ G L+QIS + D+LVDT+AL D++ +L F +P + KVFHG+ D+
Sbjct: 252 DLEHHDYRSYYGLVCLMQISNRQNDWLVDTLALRDDLEVLNEIFTNPQILKVFHGAFMDI 311
Query: 194 MWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAE 253
+WLQRD +Y+V+LFDT A + L + SLAYLLE++ T+K Q DWR RPL
Sbjct: 312 IWLQRDLGLYIVSLFDTYHAAKKLGLSKFSLAYLLESFAKFKTSKKYQLADWRLRPLSPA 371
Query: 254 MLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRR------------- 300
M YA++D H+LLYI + +L + D K VL SR+
Sbjct: 372 MKAYARSDTHFLLYIYDQMRNKLLEN--------DGKLQEVLYESRQVAKRRFEYTKFRP 423
Query: 301 -SNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMAR 359
S+T VY+ + S P E +S + ++ + + L+ L WRD +A+
Sbjct: 424 ISSTTTALVYSPLMVSNPREPYSSIM---------SQYNVPAFKKPLIEILFEWRDRVAK 474
Query: 360 VHDESLRFVLSDQAIIALAN 379
DES+R+++ +Q ++ LA+
Sbjct: 475 RQDESVRYIMPNQLLVTLAS 494
>gi|112491261|pdb|2HBJ|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain
gi|112491264|pdb|2HBK|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn
gi|112491267|pdb|2HBL|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn, Zn, And Amp
gi|112491277|pdb|2HBM|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p,
Reveals An Interplay Between The Active Site And The
Hrdc Domain; Protein In Complex With Mn, Zn, And Ump
Length = 410
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 175/377 (46%), Gaps = 53/377 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSG---------------------SHPYELEITAL 86
KPQ FK + ++ PF KEK + HPYE EI
Sbjct: 5 KPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQ 64
Query: 87 LENP-----RPEFDFSNVDLDLQRSDSF-VWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+P R E + D DS +WV+T ++L + L AVD E H
Sbjct: 65 EYSPEILQIREEIPSKSWD------DSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDY 118
Query: 141 RSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
RS+ G L+QIST + DYLVDT+ L + + IL F +P + KVFHG+ D++WLQRD
Sbjct: 119 RSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQRDL 178
Query: 201 HIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+YVV LFDT A + + P+ SLAYLLE + T+K Q DWR RPL M A+
Sbjct: 179 GLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAAARA 238
Query: 261 DAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
D H+LL I L N +K VL SR + Y+K P
Sbjct: 239 DTHFLLNIYDQL---------RNKLIESNKLAGVLYESRNVAKRRFE-YSKYRPLTPSSE 288
Query: 321 AASSIF----FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
S I +++L Q + V LVR L WRDL+AR DES RFV+ +Q + A
Sbjct: 289 VYSPIEKESPWKILMYQYNIPPEREV---LVRELYQWRDLIARRDDESPRFVMPNQLLAA 345
Query: 377 LANKAPANRTDVYTTIA 393
L P TDV ++
Sbjct: 346 LVAYTP---TDVIGVVS 359
>gi|358385873|gb|EHK23469.1| hypothetical protein TRIVIDRAFT_123406, partial [Trichoderma virens
Gv29-8]
Length = 821
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 177/361 (49%), Gaps = 43/361 (11%)
Query: 77 HPYELEITAL--------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
HPYE EI+++ +++P P S + WV+T + ++ L K
Sbjct: 191 HPYEAEISSMQYPDRVFQIQDPMPPQPVE--------STAATWVDTYEGVVDMLQELKKA 242
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFH 187
AVD E H R+++G +L+QIST ++D++VDT+ ++ +L FADP + KVFH
Sbjct: 243 KEIAVDLEHHDFRTYIGLVSLMQISTREKDWIVDTLKPWRHKLQVLNEVFADPTIVKVFH 302
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +YV LFDT A E L +SLA+LL + +K Q DWR
Sbjct: 303 GAYMDMVWLQRDLGLYVNGLFDTFFASEALHYSSRSLAFLLSKFVNFEADKRYQLADWRI 362
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD-DKFNFVLEASRRSNTVCL 306
RPLP EM+ YA++D HYLLYI + +L Q + ++ PD D + VLE SR + L
Sbjct: 363 RPLPEEMMYYARSDTHYLLYIYDKIRNDLVQLSDRSN--PDKDLISIVLEKSR---GLSL 417
Query: 307 QVYTK-EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
+ E GE + F L N G S + R L WRD+ AR DE+
Sbjct: 418 SRHENLEFNEETGEGSRGWYNFVLKNSHFGYKSDQFA---IFRALWKWRDVTARTEDENP 474
Query: 366 RFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQ 425
FVL + +A P D S LP +P+ S ++++ Q
Sbjct: 475 NFVLGTSNLTEIARANPP----------------DAKAFHSLLPLTAPLARSKVNEIWSQ 518
Query: 426 V 426
+
Sbjct: 519 I 519
>gi|401413034|ref|XP_003885964.1| Ribonuclease D, related [Neospora caninum Liverpool]
gi|325120384|emb|CBZ55938.1| Ribonuclease D, related [Neospora caninum Liverpool]
Length = 1387
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 31/296 (10%)
Query: 109 FVWVETKSQLNELANALSKEF--FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
V + K +L L + LS A+D E HS S+ GFT L+Q+ST ++DYL+D L
Sbjct: 458 LVRISEKEELQHLVDELSTGAHPLVAIDLEHHSFHSYRGFTCLLQLSTREKDYLIDPFPL 517
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLA 225
+ + +L A+P + K+FHG+D+D++WLQRDF +YVVN+FDT A L+ P SLA
Sbjct: 518 FEHLHVLNAITANPKILKIFHGADSDIIWLQRDFSVYVVNMFDTCVAARALAVPGGASLA 577
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL--------- 276
LL TYCGV NK Q DWR+RPL EM YA++D HYL +I + +L
Sbjct: 578 NLLHTYCGVEANKQYQLADWRRRPLTPEMEAYARSDTHYLPFIFDVMKNQLLSKPELGGA 637
Query: 277 --------KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
++G E + F L+ RS VCL+++ + P EA A
Sbjct: 638 LSPPAVTGLEEGLEVTEAGQQAMQFTLD---RSRDVCLKLHVEAPFDAPAEAEA-----L 689
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L + G+S +S V + L WRD +AR D S + + ++ LA K P +
Sbjct: 690 LKRNRAGLSPLSYV---VFIELLKWRDTLARRLDRSPVSLATPAHLLLLAQKRPTS 742
>gi|299473136|emb|CBN78712.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1278
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 143/258 (55%), Gaps = 30/258 (11%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E HS R+FLG L+Q+ST ++DY+VD + L E+ L P F+DP + KVFHGSD
Sbjct: 336 IAVDLEHHSFRTFLGVVCLMQLSTREQDYIVDPLKLRGEMGRLLPVFSDPNIVKVFHGSD 395
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+DV+WLQRD +Y+VN+FDT +A L P LA+LLE +C +K Q DWR RPL
Sbjct: 396 SDVLWLQRDLGLYLVNMFDTGQAARQLGLPSFGLAHLLEKFCDFVPDKKHQLSDWRMRPL 455
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
PA+M L+ +L++ G D VL+ASR +CL+ +
Sbjct: 456 PADM-----------------LLIDLERSGG------DVAVKAVLDASRE---ICLRRFE 489
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
K E S + R G G + V + ++ L +WRD++AR DES +V+S
Sbjct: 490 KPAFQ---EKGWSEVLKR-QGGNGVLDDFGDVPRRVLSALWSWRDMIARAEDESYGYVMS 545
Query: 371 DQAIIALANKAPANRTDV 388
+I +A K P++R D+
Sbjct: 546 AYVMIRVARKCPSSRDDL 563
>gi|344304844|gb|EGW35076.1| hypothetical protein SPAPADRAFT_53425 [Spathaspora passalidarum
NRRL Y-27907]
Length = 756
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 163/316 (51%), Gaps = 40/316 (12%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDT 135
+ PY I P P D+S + +WV+T +L ++ L AVD
Sbjct: 201 NQPYPEAILQSAVEPIPSKDWSTTEA--------IWVDTVEELTKMVTVLQSSTEIAVDL 252
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
E H R++ G L+QIS +D+++DT+AL D++++L F DP + KVFHG+ D++W
Sbjct: 253 EHHDYRTYYGIVCLMQISNRDQDWIIDTLALRDDLTVLNTVFTDPSIVKVFHGAFMDIIW 312
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +Y+V+LFDT A + L P+ SLAYLLET+ T+K Q DWR RPL M+
Sbjct: 313 LQRDLGLYIVSLFDTYCASKNLGFPKHSLAYLLETFAHFKTSKKYQLADWRIRPLSHPMM 372
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE--- 312
YA++D H+LL I L N ++K VL SR+ + YTK
Sbjct: 373 AYARSDTHFLLNIYDQL---------RNKLIHENKLQQVLYDSRQVAKRRFE-YTKYRPL 422
Query: 313 ----------IESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHD 362
+ S P E AS ++ ++ S + +V L WRDL+A+ D
Sbjct: 423 APNGKVSCPVMSSNPREPFASIMY---------QYNVPSFKKGVVEVLYNWRDLVAKQED 473
Query: 363 ESLRFVLSDQAIIALA 378
ES+R+++ +Q ++ LA
Sbjct: 474 ESVRYIMPNQLLVTLA 489
>gi|125773943|ref|XP_001358230.1| GA20243 [Drosophila pseudoobscura pseudoobscura]
gi|54637966|gb|EAL27368.1| GA20243 [Drosophila pseudoobscura pseudoobscura]
Length = 905
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 55/364 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGS-------------------HPYELEITALLE 88
+PQ NFK + ++ +PF KEK + HPYE E+ L
Sbjct: 197 RPQMNFKTPVDNSDQNPFVPRLKEKPNSLKPLALLPEYDEAGNVHAYLHPYEFELMKL-- 254
Query: 89 NPRPEFDFSNVDLDLQR----------SDSFVWVETKSQLNELANALSKEFFFAVDTEQH 138
P E LQR + + V++ +LN+ L + A+D E H
Sbjct: 255 EPSAE--------QLQRQTPLLPAPPAATELMLVDSVEKLNQALEELRRAPHIAIDVEHH 306
Query: 139 SLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQR 198
S R+F+G T L+Q+ST +DY+ D++AL +E+ +L DP K+ HG+D D+ WLQR
Sbjct: 307 SYRTFMGITCLVQMSTRTKDYIFDSLALREEMHVLNLVLTDPKKVKILHGADQDIEWLQR 366
Query: 199 DFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYA 258
D +YVVN+FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP +++ YA
Sbjct: 367 DLSLYVVNMFDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADWRMRPLPQQLIDYA 426
Query: 259 QTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPG 318
+ D HYL+Y+ + + +L Q S + S VC + YTK P
Sbjct: 427 RQDTHYLIYVYERMTNDLLQAEQGQSQALRTVYQL-------STEVCKKRYTK-----PH 474
Query: 319 EAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
S + + S + +R + WRD AR DES +VL + ++ +A
Sbjct: 475 VGPESHLDL----VRKTKRSFDNRQLHALRGIFQWRDATARQEDESYGYVLPNHMMLQIA 530
Query: 379 NKAP 382
P
Sbjct: 531 ESLP 534
>gi|340723182|ref|XP_003399974.1| PREDICTED: exosome component 10-like [Bombus terrestris]
Length = 1295
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 164/327 (50%), Gaps = 21/327 (6%)
Query: 60 NSYSPFKHANKEKSSG---SHPYELEITALLE-NPRPEFDFSNVDLDLQRSDSFVWVETK 115
NS P +E +G SHPYE E+ + N + + L+ + V ++
Sbjct: 203 NSLKPLAIYLEEGENGEIFSHPYEYELDMFVPPNDQLKKSVPRKYKPLEET-LLVMIKDP 261
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
S + L L + AVD E HS RSF G T L+QIST DYL+DT++L E+ L
Sbjct: 262 SDIELLIEDLKRYKEIAVDLEHHSYRSFQGITCLMQISTGDTDYLIDTLSLRSELHELNE 321
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
F + KVFHG+D D+ WLQRD +YVVN+FDT +A + L+ P SLAYLL+ YC V
Sbjct: 322 IFTKSTILKVFHGADLDIQWLQRDLSLYVVNMFDTHQAAKQLNLPYLSLAYLLKHYCNVD 381
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
+K Q DWR RPLP ++++YA+ D HYLLYI L L N + N +
Sbjct: 382 PDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKDLLRNALIDVAN-------GQINILK 434
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
RS +C Y K + + + I +R + + ++ L WRD
Sbjct: 435 AVYDRSTEICKNTYIKPVWT----EESCMIMYRKSQKMFNNKQLYA-----LKELHKWRD 485
Query: 356 LMARVHDESLRFVLSDQAIIALANKAP 382
AR D+S+ +VL + ++ +A P
Sbjct: 486 QTARGEDDSIGYVLPNHMLLNIAETLP 512
>gi|255730563|ref|XP_002550206.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132163|gb|EER31721.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 786
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 155/306 (50%), Gaps = 22/306 (7%)
Query: 76 SHPYELEITALLENPRPEFDFSN---VDLDLQRSDSFVWVETKSQLNELANALSKEFFFA 132
+ PYE EI P PE + + S WV+T LN++ L K A
Sbjct: 199 AQPYEYEID---NQPYPEKVLTKSEPISPQDWSSTKATWVDTVEALNKMIEELKKSEEIA 255
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDND 192
VD E H R++ G L+QIS +D+++DT+AL DE++ L F +P + KVFHG+ D
Sbjct: 256 VDLEHHDFRTYYGIVCLMQISNRDQDWIIDTLALRDELTELNEVFTNPNIVKVFHGAFMD 315
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +Y+V+LFDT A L + SLAYLLE Y T+K Q DWR RPL +
Sbjct: 316 IIWLQRDLGLYIVSLFDTYHASRALGLSRFSLAYLLEHYAQFKTSKKYQLADWRIRPLSS 375
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK- 311
ML YA++D H+LLYI L +N DK VL SR+ + YTK
Sbjct: 376 PMLAYARSDTHFLLYIYDQL---------KNKLIDSDKLRGVLHDSRQVAKRRFE-YTKF 425
Query: 312 --EIESYPGEAAASSIFFRLLNGQGGVSS---ISSVTQDLVRRLCAWRDLMARVHDESLR 366
+ + + F G + S + + LV L WRD MAR DES+R
Sbjct: 426 RPLANLFSKQVTCPVMAFNPKEPWGSIVSQYNVPPFKKPLVEVLYKWRDAMARKEDESVR 485
Query: 367 FVLSDQ 372
F++ +Q
Sbjct: 486 FIMPNQ 491
>gi|346973710|gb|EGY17162.1| hypothetical protein VDAG_00844 [Verticillium dahliae VdLs.17]
Length = 804
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 179/363 (49%), Gaps = 28/363 (7%)
Query: 48 KPQHNFKRVLADNSYSPF-------------KHANKEKSSGS-HPYELEITALLENPRPE 93
KPQ F+R + + S+ P A SGS HPYE EI L PE
Sbjct: 142 KPQLEFERAIDNTSWKPVLSKKPNASVPLEESLAQDSAESGSKHPYEAEI---LAASYPE 198
Query: 94 FDFSNVDLDLQ---RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALI 150
+ + L +S + WV+T + E+ L K AVD E H R++ G +L+
Sbjct: 199 RVYQKAEPILYHPVKSTTAKWVDTYEGVLEMLGELKKAKEIAVDLEHHDTRTYAGLLSLM 258
Query: 151 QISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
QIST +D++VDT+ ++ +L F DP + KVFHG+ D+ WLQRD +Y+ LFD
Sbjct: 259 QISTRDQDWIVDTLKPWRHQLEVLNEVFTDPKIVKVFHGAHMDMQWLQRDLGLYINGLFD 318
Query: 210 TAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIA 269
T A E+L PQ+SLAYLL+ + +K Q DWR RPLP EM YA++D HYLLYI
Sbjct: 319 TFFAAEILGYPQRSLAYLLKRFVDFDADKKYQMADWRIRPLPEEMFYYARSDTHYLLYIF 378
Query: 270 KCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRL 329
+ EL ++ S D VL+ +S + L Y + ++ P S ++ +
Sbjct: 379 DRIRNEL-LDASDRSKPETDIIQQVLQ---KSKELSLSRY-EGLDFDPETGHGSRGWYGV 433
Query: 330 LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
L +S R + WRD AR DES +VL + AI +A P + ++
Sbjct: 434 L--LKNPMPLSGKQFAAYRAIWKWRDDTARRLDESTGYVLPNAAIAEIARHMPPDAKALH 491
Query: 390 TTI 392
+ I
Sbjct: 492 SLI 494
>gi|406862035|gb|EKD15087.1| putative exosome complex exonuclease Rrp6 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 804
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 166/328 (50%), Gaps = 30/328 (9%)
Query: 77 HPYELEITALL--------ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
HPYE EI L +P P F S +V+T+ + E+ L +
Sbjct: 211 HPYEHEILHLTYPQSIYQKADPIPYLPFETT--------SATFVDTEEGVREMLEELKEA 262
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFH 187
A+D E H RS++G +L+QIST ++D++VDT+ + +L FADP + KVFH
Sbjct: 263 SEIAIDLEHHDQRSYVGLVSLMQISTREKDWIVDTLKPWRQNLQVLNEVFADPKIIKVFH 322
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +YVV LFDT A L SLA+LL+ + +K Q DWR
Sbjct: 323 GAFMDIVWLQRDLGLYVVGLFDTHHASRALGYSGASLAFLLKKFIDFDADKQYQMADWRI 382
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD-KFNFVLEASRRSNTVCL 306
RPLPAEM YA+ D H+LLYI + EL + NS PD+ + L+ + ++ +
Sbjct: 383 RPLPAEMFFYARADTHFLLYIFDMVRNELIDRS--NSEVPDENRLEITLQKCKETSLLRF 440
Query: 307 --QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
QVY + PG +F LN S +S+ + R + WRD +AR+ D+S
Sbjct: 441 ERQVYNTDSGKGPGG------WFSQLNKTP--SLLSNEQFAVFRAVHGWRDKIARIDDDS 492
Query: 365 LRFVLSDQAIIALANKAPANRTDVYTTI 392
FVL A++ LA P + V I
Sbjct: 493 PTFVLPQHAVLTLAKLMPMDMVGVLGLI 520
>gi|242034371|ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
gi|241918434|gb|EER91578.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
Length = 882
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 174/346 (50%), Gaps = 42/346 (12%)
Query: 42 YLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS----HPYELEITALLENPRPEFDFS 97
++++ P+PQ + R++ DNS PF+H E+S HP E ++ + R D
Sbjct: 194 HIRTIPRPQDVY-RIVVDNSSKPFEHVLLERSEDGTRVMHPLE-KLPVEQQINRNVLDSE 251
Query: 98 NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
V F +VE L LA L FA IST E
Sbjct: 252 PVKPPALVDTPFTFVEDLKTLEVLATKLKDATEFA-------------------ISTRTE 292
Query: 158 DYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
D++VDT+ L + L+ FF DP KV HG+ D++WLQRDF IYV NLFDT +A +V
Sbjct: 293 DFIVDTLKLRKYLGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNLFDTGQASKV 352
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L + SL +LL +CGV NK Q DWR RPLP EM++YA+ D HYLLYI + L
Sbjct: 353 LQMDRNSLEHLLHHFCGVTANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDLMRLRL 412
Query: 277 KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV 336
NE+S D +LE +RSN +CLQ+Y KE + + LN + +
Sbjct: 413 V---NESSGEND----LLLEVCKRSNEICLQLYEKEQLTDTSYLHIHGLKENELNAR-QL 464
Query: 337 SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
S +SS L WRD +AR DES ++L ++ ++ +A + P
Sbjct: 465 SVLSS--------LYRWRDGIARAEDESTGYILPNKTLLEIAKEMP 502
>gi|164655640|ref|XP_001728949.1| hypothetical protein MGL_3943 [Malassezia globosa CBS 7966]
gi|159102837|gb|EDP41735.1| hypothetical protein MGL_3943 [Malassezia globosa CBS 7966]
Length = 849
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 169/336 (50%), Gaps = 47/336 (13%)
Query: 78 PYELEITALLENPRPEFDF------SNVDLDLQRSDS-----FVWVETKSQLNELANALS 126
PY +EI + P PE F + V L ++ S FVWV++ ++ +L L
Sbjct: 208 PYYVEIQ---QTPVPESAFHVGNAEAPVPLRIENPGSSQPCDFVWVDSAEKVRQLQKHLE 264
Query: 127 KEFF--FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA--LHDEISILQPFFADPGV 182
+E AVD E H+ RS+ G L+QIST D++VDT+ + + +L F P
Sbjct: 265 EERVTEIAVDLEHHNQRSYQGIVCLMQISTRWGDWIVDTLVDEVRESAELLNTAFTHPDK 324
Query: 183 CKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQR 242
V HG+D+D++WLQRD +YV NLFDT +A L SLA+LL Y +K Q
Sbjct: 325 VLVLHGADHDILWLQRDLGLYVTNLFDTFQAARALQFGALSLAFLLLRYTNFEADKRFQT 384
Query: 243 EDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSN 302
DWR RPLP EML YA++D H LLY+ CL EL Q+G + V E RS
Sbjct: 385 ADWRIRPLPREMLFYARSDTHALLYVYDCLRNELLQRGGPLA---------VKEVFDRSK 435
Query: 303 TVCLQVYTKEIESYPGEAAAS--SIFFRLLNGQGGVSSISSVTQD------------LVR 348
+VY KE G + S++ R+ GG ++ +QD +VR
Sbjct: 436 PTASKVYAKEPWDERGNSRGGWKSLWIRM----GG--DLARASQDAPPDAPLGREERIVR 489
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
RL WRD +AR DES FV+ + +I LA + P N
Sbjct: 490 RLHHWRDQVARKEDESPAFVMPPRVLIQLALRPPLN 525
>gi|224079457|ref|XP_002190659.1| PREDICTED: exosome component 10-like, partial [Taeniopygia guttata]
Length = 504
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 148/252 (58%), Gaps = 16/252 (6%)
Query: 71 EKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV---WVETKSQLNELANALSK 127
E+ +HPY+ E+ +P P+ +L + R ++ T +L EL L
Sbjct: 254 EQDMFAHPYQYELEHF--SP-PDEVLKKPELQMYRPIEETPCHFITTLDELVELNEKLMT 310
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
FA+D E HS RSFLG T L+QIST ED+++DT+AL +++IL F DP + KV H
Sbjct: 311 CKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLALRSDMNILNETFTDPAIVKVLH 370
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+D+DV WLQRDF +Y+VN+FDT +A +L+ + SL +LL+ YCGV +K Q DWR
Sbjct: 371 GADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCGVDADKKYQLADWRI 430
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP EM++YA+ D HYLLYI + L ++G E + V + RS +CL+
Sbjct: 431 RPLPEEMIRYARDDTHYLLYIYDKVRELLWERGKEQP----TQLQVVWQ---RSRDICLK 483
Query: 308 VYTKEI---ESY 316
Y K + ESY
Sbjct: 484 KYIKPLFTDESY 495
>gi|340966615|gb|EGS22122.1| exosome complex exonuclease rrp6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 859
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 168/322 (52%), Gaps = 18/322 (5%)
Query: 77 HPYELEITALLENP-----RPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
HPYE EIT L P R + ++ + + +WV+T + E+ L K
Sbjct: 197 HPYEYEITNLKYPPEVFQCREPIKYQPIE-----TTTAIWVDTWEGVLEMLEELKKATEI 251
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDT-IALHDEISILQPFFADPGVCKVFHGSD 190
A+D E H RS+ G +L+QIST ++D++VDT + ++ IL FADP + KV HG+
Sbjct: 252 AIDLEHHDFRSYNGLLSLMQISTREKDWIVDTLVPWRHKLEILNEVFADPKIVKVLHGAF 311
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D++WLQRD +Y+V LFDT A +VL P KSLAYLL+ + +K Q DWR RPL
Sbjct: 312 MDIIWLQRDLGLYIVGLFDTYYASDVLGYPGKSLAYLLKRFADFDADKKYQLADWRIRPL 371
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P EM YA++D H+LLYI L EL + N PD K + +RS LQ Y
Sbjct: 372 PEEMFYYARSDTHFLLYIYDHLRNELAELSAANH--PDGK--PIDRVIKRSKEESLQRY- 426
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
+ + P + +F L + + + + WRD +AR DES ++ ++
Sbjct: 427 EHLTCDPETGIGARGWFNTLCKSPAAYNREQFA--VYKAVHKWRDDLARREDESPQYFMT 484
Query: 371 DQAIIALANKAPANRTDVYTTI 392
Q + +A P+++ +++ +
Sbjct: 485 QQILADIARILPSDKKALWSLL 506
>gi|443898900|dbj|GAC76233.1| exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100
[Pseudozyma antarctica T-34]
Length = 917
Score = 179 bits (454), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 156/319 (48%), Gaps = 26/319 (8%)
Query: 88 ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF--FAVDTEQHSLRSFLG 145
+ P P + + L S F WV TK+Q+ L + L + A+D E HS R++ G
Sbjct: 320 DQPPPPLNEKDPSLSTDTS-PFQWVSTKAQIEALRDHLDEPRVTEIAIDLEHHSYRTYQG 378
Query: 146 FTALIQISTEKEDYLVDTIALHDEI----SILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
L+Q+ST D+++DT L DE+ +L F P KV HG+++DV+WLQRD
Sbjct: 379 IVCLMQLSTRWGDWIIDT--LSDEVRQHAELLNSAFTHPDKVKVLHGANHDVLWLQRDLG 436
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+Y+VNLFDT A VL P L YL+ YC +K Q DWR RPLP EML YA++D
Sbjct: 437 LYLVNLFDTYHATNVLLFPSHGLNYLMARYCNFDADKRYQLADWRIRPLPKEMLYYARSD 496
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
H LLYI L EL + G + + + RS V + Y KE GE
Sbjct: 497 THTLLYIYDNLRHELMEAGG---------VDAIRDVFVRSKEVAMATYAKEEWDAEGETR 547
Query: 322 AS-SIFFRLLNGQG--GVSSISSVTQ-----DLVRRLCAWRDLMARVHDESLRFVLSDQA 373
+R G+ G V Q LVR L WRD +AR DES R++L
Sbjct: 548 EGWRSVWRKWGGEAALGTEERREVGQMKREERLVRALHRWRDGVAREQDESPRYILGANN 607
Query: 374 IIALANKAPANRTDVYTTI 392
++ LA +AP V I
Sbjct: 608 LMMLAARAPTKVEGVLACI 626
>gi|407850984|gb|EKG05126.1| hypothetical protein TCSYLVIO_003804 [Trypanosoma cruzi]
Length = 713
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 149/278 (53%), Gaps = 14/278 (5%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+V+ L E+ L KE AVD E HS S+ GFT L+QIST ED L+D + L +
Sbjct: 215 FVDATVDLEEVVALLLKEKEIAVDLEHHSFYSYQGFTCLMQISTRSEDILIDCLKLRSLM 274
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
+L P F +P + KV HG+ D+ WLQ+DF +Y+VN FDT A + L P LA+ ++
Sbjct: 275 HLLAPVFLNPNILKVLHGAREDIRWLQKDFGLYLVNFFDTGIALQTLHMPH-GLAFAVDH 333
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+C V +K Q DWR RP+PAEM+ YA+ D H+LLY+ L L +E +
Sbjct: 334 FCQVKLDKKYQTADWRIRPIPAEMVTYARQDTHFLLYVYDRLKTLLLN--SEGRASIGNL 391
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
VL SRR + L++Y K P +S L GG +SSV + R +
Sbjct: 392 LVHVLNESRR---LSLEIYEK-----PQLDPDASYKIALGRSLGG---LSSVQMQVAREI 440
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
WRD +AR D+S VL A++A+A K P + DV
Sbjct: 441 FNWRDAIAREVDDSPPAVLRLSAVLAIATKLPTSANDV 478
>gi|322708171|gb|EFY99748.1| exosome complex exonuclease Rrp6, putative [Metarhizium anisopliae
ARSEF 23]
Length = 830
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 166/319 (52%), Gaps = 27/319 (8%)
Query: 77 HPYELEITALLENPRPEFDFSNVD-LDLQRSDSF--VWVETKSQLNELANALSKEFFFAV 133
HPYE EI+ + PE+ F D + Q DS WV+T + E+ L K AV
Sbjct: 191 HPYETEISTM---KYPEWVFQKHDPIPSQPIDSTKATWVDTYEGVLEMLEELRKAKEIAV 247
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDND 192
D E H R++ G L+Q+ST D++VDT+ ++ +L FADP V KVFHG+ D
Sbjct: 248 DLEHHDFRTYTGLVCLMQVSTRDRDWIVDTLQPWRHKLEVLNDVFADPSVVKVFHGAYMD 307
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +YV LFDT AC +L+ P +SLA+LL + G +K Q DWR RP+P
Sbjct: 308 MVWLQRDLGLYVNGLFDTYFACNLLNYPGRSLAFLLSKFVGFDADKQYQLADWRIRPIPE 367
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY-TK 311
+ML YA++D HYLLYI + EL + +++ D + +++ +A RS + L +
Sbjct: 368 DMLYYARSDTHYLLYIYDNVRNELIEASDKS----DPEKDYINQALERSRELALSRHENP 423
Query: 312 EIESYPGEAAAS--SIFFR----LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
+ GE A + F+ LNG+ + + L WRD AR DES
Sbjct: 424 DYNETTGEGARGWYNYVFKHSHLALNGEQF---------SIFKALWKWRDETARQEDESP 474
Query: 366 RFVLSDQAIIALANKAPAN 384
FVL + +A P +
Sbjct: 475 NFVLGPTNVTEIARVNPPD 493
>gi|115396098|ref|XP_001213688.1| exosome component 3'-5' exonuclease [Aspergillus terreus NIH2624]
gi|114193257|gb|EAU34957.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 761
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 193/392 (49%), Gaps = 47/392 (11%)
Query: 30 RRKLNQCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFKHANKEKSSG------------- 75
R+ ++ P Y S+ PKPQ F+R+ + SPFK K K
Sbjct: 128 RKAPSKFPTIYDYGPSKIPKPQLQFERLADNTDVSPFKPLLKTKPHAMVPLEQSLKVADP 187
Query: 76 ----SHPYELEITALLENPRPEF-DFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
+PYE EI A + P P + + VD S + +V+T + E+ L
Sbjct: 188 AAGYPNPYEAEIRAA-KYPDPTYVESPPVDYLPFESTTATFVDTVEGVKEMLGELKAAKE 246
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGS 189
A+D E H + S+ G +L+QIST ++D++VDT+ +E+ +L F DP + KV HGS
Sbjct: 247 IAIDLEHHDVHSYHGLVSLMQISTREKDWVVDTLKPWREELQMLNEVFTDPSILKVLHGS 306
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D++WLQRD +Y+V +FDT A L+ P++SL YLL+ + +K Q DWR RP
Sbjct: 307 SMDIIWLQRDLGLYIVGMFDTYHAACALNYPKRSLKYLLQKFVNFEADKRYQMADWRIRP 366
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
LP+ M YA++D HYLL+I L EL + N ++ ++VLE RS T LQ Y
Sbjct: 367 LPSGMFDYARSDTHYLLHIYDHLRNELIRNSTSN----NNLIDYVLE---RSKTEALQRY 419
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGG----VSSISSVTQD----LVRRLCAWRDLMARVH 361
+ + +AA L G GG +S S V + + + WRD +AR
Sbjct: 420 ERPVY----DAA-------LGQGPGGWYDYLSRSSVVVSKEQFAVFKAVHQWRDQVAREE 468
Query: 362 DESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
DE ++ V + +A P + ++ T++
Sbjct: 469 DEGVQCVFPKHVLFRVAQVMPLDLGTLFRTLS 500
>gi|119491955|ref|XP_001263472.1| exosome component 3'-5' exonuclease [Neosartorya fischeri NRRL 181]
gi|119411632|gb|EAW21575.1| exosome complex exonuclease Rrp6, putative [Neosartorya fischeri
NRRL 181]
Length = 765
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 189/374 (50%), Gaps = 46/374 (12%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HA---------NKEKSSG-SHPYELEITALLEN 89
PKPQ F+R + SPFK HA + + + G +PYE EI A +
Sbjct: 146 PKPQLLFQRPPNNTDVSPFKPLLRIKPHAIVPLEDSLKSTDPAQGYRNPYETEIRAA-KY 204
Query: 90 PRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P + S+ V+ S + +V+T + E+ + L A+D E H + S+ G +
Sbjct: 205 PESTYTVSHPVEYQPFESTAATFVDTLEGVKEMLSELKSAKEIAIDLEHHDVHSYHGLVS 264
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ +E+ IL FADPG+ KV HGS D++WLQRD +YVV +
Sbjct: 265 LMQISTRDKDWVVDTLKPWREELQILNEVFADPGILKVLHGSSMDIIWLQRDLGLYVVGM 324
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT A L+ P++SL +LL+ + +K Q DWR RPLP+ M YA++D HYLLY
Sbjct: 325 FDTYHAACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPLPSGMFDYARSDTHYLLY 384
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I L EL ENS + ++VLE S+ LQ Y + P AA+
Sbjct: 385 IYDHLRNELL----ENSTPDHNLVDYVLEQSKNE---ALQRYER-----PVYDAATG--- 429
Query: 328 RLLNGQGG--------VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
GQGG + +S + + + WRD +AR DE ++ V + +A
Sbjct: 430 ---QGQGGWYDYLYRNPAVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHILFKIAQ 486
Query: 380 KAPANRTDVYTTIA 393
P ++ ++ T++
Sbjct: 487 VMPLDQGTLFRTLS 500
>gi|398390487|ref|XP_003848704.1| hypothetical protein MYCGRDRAFT_76687 [Zymoseptoria tritici IPO323]
gi|339468579|gb|EGP83680.1| hypothetical protein MYCGRDRAFT_76687 [Zymoseptoria tritici IPO323]
Length = 796
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 27/359 (7%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFS-NVDLDLQRS 106
KPQ F + SPFK + K S P E E A ++ R + ++++ R
Sbjct: 141 KPQLLFDHPPTNTEQSPFKPLLQSKPHASFPLETEPIASDDDTRLAYPHPYQLEIEQYRY 200
Query: 107 DSFVW------------------VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
S V+ V+T+ L E+ L + A+D E H RS++G +
Sbjct: 201 PSSVYTHSEPIPYHPFETTTATFVDTEESLAEMLEELKQAKEIAIDLEHHDNRSYIGIVS 260
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ ++ L FA+P + KV HG+ D +WLQRD +Y+V L
Sbjct: 261 LMQISTRDKDWIVDTLKPWRRKLQCLNEVFANPTIVKVLHGAFMDAIWLQRDLGLYLVGL 320
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT AC L SLA+LL+ + V K Q DWR RPLP E+ YA++D HYLLY
Sbjct: 321 FDTHYACRALGYAGGSLAFLLKKFADVDAQKQHQMADWRVRPLPKELFDYARSDTHYLLY 380
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI-F 326
I C+ EL ++ + + PD + + + + ++S V LQ Y E Y E ++ +
Sbjct: 381 IFDCMRNELIERSDFSK--PDHEGDKLWDVLQKSTEVALQRY--EHPQYDAELGQGAMGW 436
Query: 327 FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
++LL+ + S + + + WRD +AR D+S+ FV+ + I +LA P R
Sbjct: 437 YKLLSRTPALFSPEQFA--VFKAVHHWRDRVAREQDDSIHFVMPNHQIFSLAKAMPPTR 493
>gi|302415657|ref|XP_003005660.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
gi|261355076|gb|EEY17504.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
Length = 894
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 179/363 (49%), Gaps = 28/363 (7%)
Query: 48 KPQHNFKRVLADNSYSPF-------------KHANKEKSSGS-HPYELEITALLENPRPE 93
KPQ F+R + + S+ P A SGS HPYE EI L PE
Sbjct: 193 KPQLEFERAIDNTSWKPVLSKKPNASVPLEESLARDSADSGSKHPYETEI---LAANYPE 249
Query: 94 FDFSNVDLDLQ---RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALI 150
+ + L +S + WV+T + E+ L K AVD E H R++ G +L+
Sbjct: 250 QVYQKAEPILYHPVKSTTAKWVDTYEGVLEMLGELKKAKEIAVDLEHHDTRTYAGLLSLM 309
Query: 151 QISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
QIST +D++VDT+ ++ +L F +P + KVFHG+ D+ WLQRD +Y+ LFD
Sbjct: 310 QISTRDQDWIVDTLKPWRHQLEVLNEVFTNPKIVKVFHGAHMDMQWLQRDLGLYINGLFD 369
Query: 210 TAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIA 269
T A E+L PQ+SLAYLL+ + +K Q DWR RPLP EM YA++D HYLLYI
Sbjct: 370 TFFAAEILGYPQRSLAYLLKRFVDFDADKKYQMADWRIRPLPEEMFYYARSDTHYLLYIF 429
Query: 270 KCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRL 329
+ EL ++ S D VL+ +S + L Y + ++ P S ++ +
Sbjct: 430 DRIRNEL-LDASDRSKPETDIIQQVLQ---KSKELSLSRY-EGLDFDPETGHGSRGWYGV 484
Query: 330 LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
L +S R + WRD AR DES +VL + AI +A P + ++
Sbjct: 485 L--LKNPMPLSGKQFAAYRAIWKWRDDTARRLDESTGYVLPNAAIAEIARHMPPDAKALH 542
Query: 390 TTI 392
+ I
Sbjct: 543 SLI 545
>gi|402080291|gb|EJT75436.1| exosome complex exonuclease Rrp [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 834
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 171/332 (51%), Gaps = 19/332 (5%)
Query: 59 DNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVD----LDLQRSDSFVWVET 114
+ S S F+ + E + HPYE EI L PE + + + +S ++V+T
Sbjct: 183 EQSLSTFQDDDGE-TQYKHPYETEI---LHMKYPESTYQTREPIPYTPVTKSKP-IYVDT 237
Query: 115 KSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISIL 173
+ E+ L + AVD E H R++ G +L+Q+ST +D++VDT+ + +L
Sbjct: 238 YEGVLEMLEDLKRATEIAVDLEHHDFRTYSGLLSLMQVSTRDKDWVVDTLKPWRRRLEVL 297
Query: 174 QPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 233
FADP + KVFHG+ D++WLQRD +YVV LFDT A E L P KSLAYLL+ +
Sbjct: 298 NQVFADPKILKVFHGAFMDIIWLQRDLGLYVVGLFDTFHAAEALLYPSKSLAYLLKKFAD 357
Query: 234 VATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNF 293
+K Q DWR RPL EML YA++D HYLLY+ + EL +Q PD +
Sbjct: 358 FEADKRFQMADWRIRPLSKEMLYYARSDTHYLLYVYDMMRNELVKQSRRGD--PDG--DL 413
Query: 294 VLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV-SSISSVTQDLVRRLCA 352
V +A ++S LQ + E Y + NG + S+ +S + R L
Sbjct: 414 VEKALQKSKETSLQRH----EPYTSDPVTGKGTRGWFNGISRIPSNFTSEQFAVFRELHR 469
Query: 353 WRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
WRD AR DES +++S Q ++ + P++
Sbjct: 470 WRDETARREDESPMYIMSQQVLVEASRAMPSS 501
>gi|195037619|ref|XP_001990258.1| GH19240 [Drosophila grimshawi]
gi|193894454|gb|EDV93320.1| GH19240 [Drosophila grimshawi]
Length = 911
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 202/438 (46%), Gaps = 55/438 (12%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------------------SGSHPYELEITALLE 88
+PQ FK + +++ +PF+ EK S HPYE E+ E
Sbjct: 202 RPQMRFKVPVDNSATNPFQPRLTEKPNSLKPLALLPEYDEADNIVSFLHPYEFELLKF-E 260
Query: 89 NPRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
+ + N + + + V++ +L + L A+D E HS R+F+G T
Sbjct: 261 PAKEQLQKQNPQMPAPPEKTELMLVDSVEKLQQALAELRLAHQIAIDVEHHSYRTFMGIT 320
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+Q+ST +DY+ DT+ L D++ IL DP V K+ HG D D+ WLQRD +Y+VN+
Sbjct: 321 CLVQMSTRTKDYIFDTLILRDDMHILNLVLTDPKVLKILHGGDLDIEWLQRDLSLYIVNM 380
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP +++ YA+ D HYL+Y
Sbjct: 381 FDTHRAAKALNLARLSLAFLLKFYLDMDVDKSLQLADWRMRPLPQKLIDYARQDTHYLIY 440
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I + LV +L Q S+ V + +S +C + YTK Y G + +
Sbjct: 441 IYERLVNDLLQSEQGQSHS----LRMVYQ---QSTDICKKRYTK---PYIGPDSHLDLV- 489
Query: 328 RLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTD 387
+ S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 490 -----RKTKRSFDNRQLYALRGIFTWRDATARQEDESYGYVLPNHMMLQIAESLPREMQG 544
Query: 388 VYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVENLDDILLANLQKCLGP 447
+ + C N P P P+V L + + V E ++ L+ GP
Sbjct: 545 I----------LACCN-----PIP-PLVRQQLHTLHQIVLRAREQ--SLIKPILEASCGP 586
Query: 448 NGSCPLSVFNYVLPAKNN 465
GS L+ +K N
Sbjct: 587 QGSVKLAPITKDFSSKLN 604
>gi|72387778|ref|XP_844313.1| ribosomal RNA processing protein 6 [Trypanosoma brucei TREU927]
gi|62359465|gb|AAX79902.1| ribosomal RNA processing protein 6 [Trypanosoma brucei]
gi|70800846|gb|AAZ10754.1| ribosomal RNA processing protein 6 [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 736
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 171/356 (48%), Gaps = 38/356 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSS-------GSHPYELEITA--------LLENPRP 92
+PQ F+ + DNS +PF+ ++ G HP+ I A LL+ P
Sbjct: 179 RPQLTFEHPV-DNSPTPFRPVYYDEKGVRHVGEPGVHPFAERIKAVSVPSEQLLLKTETP 237
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
L +V+T L L L E AVD E H S+ GFT L+QI
Sbjct: 238 YLSLVTCPL--------TFVDTVEDLEALVAVLLNETEIAVDLEHHDFYSYQGFTCLMQI 289
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
ST +D++VD + + + ++ P F P + KVFHG+ DV WLQ+DF +Y+VNLFDT+
Sbjct: 290 STRTQDFIVDCLKVRANMYLMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSI 349
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A + L P SLA+ ++ +C V NK Q DWR RP+PAEM+ YAQ D H+LLY+ L
Sbjct: 350 ALQNLHMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPIPAEMVSYAQQDTHFLLYVYDRL 408
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
+Q N N +L + S + L+ Y K + R L G
Sbjct: 409 -----KQLLLNCEARASVGNMLLHVFQESRLLSLERYEK--PHLDPDVTYKQALGRSLGG 461
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+SS + R + WRD+ AR D+S V+ ++++A K P + +V
Sbjct: 462 ------LSSSQLQVAREIFNWRDMAAREADDSPSAVMHISCVLSIATKLPTSANEV 511
>gi|452978276|gb|EME78040.1| hypothetical protein MYCFIDRAFT_107101, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 799
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 184/374 (49%), Gaps = 47/374 (12%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HA------------NKEKSSGSHPYELEI----- 83
KPQ F+ V ++ PFK HA + ++S HPY+LEI
Sbjct: 149 KPQLQFQHVPKNDETPPFKPLLLSKPHAVVPLETEPIASDGESQASHPHPYQLEIEQYRY 208
Query: 84 -TALLENPRP----EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQH 138
+++ P F+ + L V+++ L+ + L + A+D E H
Sbjct: 209 PSSMYTQSEPIMHHPFETTTATL----------VDSEVALDAMLKELKQAKEIAIDLEHH 258
Query: 139 SLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQ 197
+R+++G +L+QIST +D++VDT+ ++ L FADP + KV HG+ D++WLQ
Sbjct: 259 DIRTYIGIVSLMQISTRDKDWIVDTLKPWRRKLQCLNEVFADPNILKVLHGAYMDIIWLQ 318
Query: 198 RDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQY 257
RD +Y+V LFDT A L P SLAYLL+ + GV K Q DWR RPLP + Y
Sbjct: 319 RDLGLYLVGLFDTHHAARALGYPAGSLAYLLKRFAGVDAQKKYQTADWRVRPLPQALFDY 378
Query: 258 AQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYP 317
A++D HYLLYI L EL Q+ + P+ + + + + +S+ LQ Y I Y
Sbjct: 379 ARSDTHYLLYIFDNLRNELIQRSDFG--LPNHEGDKLWDVLTKSSETALQRYEHPI--YD 434
Query: 318 GEAAASSI-FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIA 376
E S +++LL + + + + R + WRD +AR D+S FV+ + +
Sbjct: 435 VENGQGSFGWYKLLAKTSAMLTKEQFS--VFRAVHQWRDEVAREQDDSTNFVMPNWQLFN 492
Query: 377 LANKAPANRTDVYT 390
+A P R +++
Sbjct: 493 IAKSMPTTRQALFS 506
>gi|326477901|gb|EGE01911.1| exosome complex exonuclease Rrp6 [Trichophyton equinum CBS 127.97]
Length = 824
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 182/359 (50%), Gaps = 34/359 (9%)
Query: 39 YSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSN 98
+ L+S+P + L + P K N HPYE EI A P ++ +
Sbjct: 180 FRPLLKSKPHALVGLEESLGGSIEDPTKPYN-------HPYEKEIEAST-YPARVYEKAE 231
Query: 99 VDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
+ +DS ++VET ++ + + L + AVD E H + G L+QIST ++
Sbjct: 232 PTMYTPVADSKAIFVETLEDVHAMLSQLKQAEEIAVDLEHHDSHVYHGLVCLMQISTREQ 291
Query: 158 DYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
D++VDT+ D++ +L FADP + KV HGS DV+WLQRD +Y+V LFDT A
Sbjct: 292 DWIVDTLKPWRDQLQVLNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASA 351
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L P+KSL +LL Y G +K Q DWR RPL A ML YA++D H+LLYI L +L
Sbjct: 352 LQLPKKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRNQL 411
Query: 277 KQQGNENSYCPDDK--FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG 334
+E+ + + +VLE RS LQ Y + P AA+ G G
Sbjct: 412 LDLPSESGFGAGGREAIEYVLE---RSKECALQRYER-----PTYDAATG------RGSG 457
Query: 335 G-----VSSISSVTQD---LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
G +S ++T++ + R L WRD AR DES + VLS +A+ LA + P ++
Sbjct: 458 GWHDMLSNSPVALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMPEDK 516
>gi|14250912|emb|CAC39261.1| Rrp6p homologue [Trypanosoma brucei]
Length = 703
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 171/356 (48%), Gaps = 38/356 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSS-------GSHPYELEITA--------LLENPRP 92
+PQ F+ + DNS +PF+ ++ G HP+ I A LL+ P
Sbjct: 146 RPQLTFEHPV-DNSPTPFRPVYYDEKGVRHVGEPGVHPFAERIKAVSVPSEQLLLKTETP 204
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
L +V+T L L L E AVD E H S+ GFT L+QI
Sbjct: 205 YLSLVTCPL--------TFVDTVEDLEALVAVLLNETEIAVDLEHHDFYSYQGFTCLMQI 256
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
ST +D++VD + + + ++ P F P + KVFHG+ DV WLQ+DF +Y+VNLFDT+
Sbjct: 257 STRTQDFIVDCLKVRANMYLMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSI 316
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A + L P SLA+ ++ +C V NK Q DWR RP+PAEM+ YAQ D H+LLY+ L
Sbjct: 317 ALQNLHMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPIPAEMVSYAQQDTHFLLYVYDRL 375
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
+Q N N +L + S + L+ Y K + R L G
Sbjct: 376 -----KQLLLNCEARASVGNMLLHVFQESRLLSLERYEK--PHLDPDVTYKQALGRSLGG 428
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+SS + R + WRD+ AR D+S V+ ++++A K P + +V
Sbjct: 429 ------LSSPQLQVAREIFNWRDMAAREADDSPSAVMHISCVLSIATKLPTSANEV 478
>gi|189182142|gb|ACD81847.1| LD13130p [Drosophila melanogaster]
Length = 930
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 42/357 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALLE 88
+PQ F+ + +++ +PF KEK S HPYE E LL+
Sbjct: 221 RPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHPYEFE---LLK 277
Query: 89 NPRPEFDFSN---VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLG 145
PE F V L + V+T +L + L + A+D E HS R+F+G
Sbjct: 278 FQPPEEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMG 337
Query: 146 FTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
T L+Q+ST +DY+ DT+ L D++ IL DP K+ HG+D D+ WLQRD +Y+V
Sbjct: 338 ITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIV 397
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
N+FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D H+L
Sbjct: 398 NMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFL 457
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI 325
+Y+ + +L QQ E + ++S VC + Y K P S +
Sbjct: 458 IYVYGRMTNDLLQQHAEPG--------LLGSVYQQSTDVCKKRYNK-----PHIGPESHL 504
Query: 326 FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 505 DL----VRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLP 557
>gi|383792210|gb|AFH41845.1| FI19715p1 [Drosophila melanogaster]
Length = 930
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 42/357 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALLE 88
+PQ F+ + +++ +PF KEK S HPYE E LL+
Sbjct: 221 RPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHPYEFE---LLK 277
Query: 89 NPRPEFDFSN---VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLG 145
PE F V L + V+T +L + L + A+D E HS R+F+G
Sbjct: 278 FQPPEEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMG 337
Query: 146 FTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
T L+Q+ST +DY+ DT+ L D++ IL DP K+ HG+D D+ WLQRD +Y+V
Sbjct: 338 ITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIV 397
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
N+FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D H+L
Sbjct: 398 NMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFL 457
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI 325
+Y+ + +L QQ E + ++S VC + Y K P S +
Sbjct: 458 IYVYGRMTNDLLQQHAEPG--------LLGSVYQQSTDVCKKRYNK-----PHIGPESHL 504
Query: 326 FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 505 DL----VRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLP 557
>gi|195390616|ref|XP_002053964.1| GJ23053 [Drosophila virilis]
gi|194152050|gb|EDW67484.1| GJ23053 [Drosophila virilis]
Length = 904
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 176/363 (48%), Gaps = 54/363 (14%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------------------SGSHPYELEITAL-- 86
+PQ FK + +++ +PFK KEK S HPYE E+
Sbjct: 194 RPQIQFKVPVDNSAQNPFKPRLKEKPNSLKPLALLPEYDDAGNVVSFLHPYEFELLKFEP 253
Query: 87 ----LENPRPEFDFSNVDLDLQRSDSFVWVET-KSQLNELANALSKEFFFAVDTEQHSLR 141
L+ +P +L D+ VET K L EL A A+D E HS R
Sbjct: 254 PKEQLQKQKPLLPAPPAQTELMLVDN---VETLKQALEELRQAPQ----IAIDVEHHSYR 306
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
+F+G T L+Q+ST +DY+ DT+ L +++ IL DP V K+ HG D D+ WLQRD
Sbjct: 307 TFMGITCLVQMSTRTKDYIFDTLTLREDMHILNLVLTDPKVLKILHGGDLDIEWLQRDLS 366
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+Y+VN+FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP +++ YA+ D
Sbjct: 367 LYIVNMFDTHRAAKALNMARLSLAFLLKHYLDLDVDKSLQLADWRMRPLPQKLIDYARQD 426
Query: 262 AHYLLYIAKCLVAELKQ--QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGE 319
HYL+Y+ + L +L Q QG + V + S VC + YTK P
Sbjct: 427 THYLIYVYERLTNDLLQAEQGPQ-------ALRMVYQMS---TEVCKKRYTK-----PHI 471
Query: 320 AAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
S + + S + +R + WRD AR DES +VL + ++ +A
Sbjct: 472 GPDSHLDL----VRKTKRSFDNRQLSALRGIFVWRDATARQEDESYGYVLPNHMMLQIAE 527
Query: 380 KAP 382
P
Sbjct: 528 SLP 530
>gi|358368335|dbj|GAA84952.1| exosome complex exonuclease Rrp6 [Aspergillus kawachii IFO 4308]
Length = 784
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 187/374 (50%), Gaps = 46/374 (12%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HA-----NKEKSSGS-----HPYELEITALLEN 89
PKPQ F+R + +PFK HA + K +GS +PYE EI A +
Sbjct: 149 PKPQLLFERKADNTDTAPFKPLLKTKPHAVVPLKDSLKLAGSAVGYVNPYETEIRAA-KY 207
Query: 90 PRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P + S VD S +V+T+ + E+ L A+D E H + S+ G +
Sbjct: 208 PASSYSVSPPVDYQPWESTKATFVDTQEGVKEMLEELKAAKEIAIDLEHHDVHSYQGLVS 267
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ +E+ +L F DP + KV HGS D++WLQRD +YVV +
Sbjct: 268 LMQISTRDKDWVVDTLKPWREELQVLNEVFTDPNILKVLHGSSMDIIWLQRDLGLYVVGM 327
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT A L+ P++SL +LL+ + +K Q DWR RP+P M YA++D HYLL+
Sbjct: 328 FDTYHAACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLH 387
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I + EL ENS ++ ++VLE S++ LQVY + P AA+
Sbjct: 388 IYDHIRNELV----ENSLPDNNLVDYVLEQSKKE---ALQVYER-----PVYDAATG--- 432
Query: 328 RLLNGQGGVSSISSVTQDLVRR--------LCAWRDLMARVHDESLRFVLSDQAIIALAN 379
G GG + S +V R + WRD +AR DE ++ V + +A+
Sbjct: 433 ---QGPGGWYDLLSRNSVVVNREQFAVFKAVHQWRDEVAREEDEGVQCVFPKHVLFRVAH 489
Query: 380 KAPANRTDVYTTIA 393
P + ++ T++
Sbjct: 490 TMPLDLGTLFRTLS 503
>gi|302501205|ref|XP_003012595.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
gi|291176154|gb|EFE31955.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
Length = 1069
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 182/363 (50%), Gaps = 39/363 (10%)
Query: 43 LQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLD 102
L+S+P + L + P K N HPYE EI A P ++ + +
Sbjct: 371 LKSKPHALVGLEESLGGSIQDPTKPYN-------HPYEKEIEAST-YPARVYEKAEPTMY 422
Query: 103 LQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLV 161
+DS ++VET ++ + + L + AVD E H + G L+QIST ++D++V
Sbjct: 423 TPVADSKAIFVETLEDVHAMLSQLKQAKEIAVDLEHHDSHVYHGLVCLMQISTREQDWIV 482
Query: 162 DTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
DT+ D++ +L FADP + KV HGS DV+WLQRD +Y+V LFDT A L P
Sbjct: 483 DTLKPWRDQLQVLNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQLP 542
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL---VAELK 277
+KSL +LL Y G +K Q DWR RPL A ML YA++D H+LLYI L + EL
Sbjct: 543 KKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRNQLLELP 602
Query: 278 QQGNENSYCPD----DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQ 333
E P + +VLE RS LQ Y + P AA+ G
Sbjct: 603 PSSEEKESGPGGGGREAIEYVLE---RSKECALQRYER-----PTYDAATG------RGS 648
Query: 334 GG-----VSSISSVTQD---LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
GG +S ++T++ + R L WRD +AR DES + VLS +A+ LA + P ++
Sbjct: 649 GGWHDMLSNSPVALTREQFAVFRALHEWRDRIARADDESPQTVLSKRALFRLAQEMPEDK 708
Query: 386 TDV 388
V
Sbjct: 709 FAV 711
>gi|226288046|gb|EEH43559.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 826
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 195/412 (47%), Gaps = 52/412 (12%)
Query: 17 AAISILFTRQQRRRRKLNQCP---QYSCYLQSEP----KPQHNFKRVLADNSYSPFK--- 66
I L Q++R L++ P Q+ P KPQ F +N SPFK
Sbjct: 109 GVIKKLSPSQEQRSAALSKRPATAQFPSVYDFGPSKISKPQLLFTSRPNNNDTSPFKPLL 168
Query: 67 ----HA-------------NKEKSSGSHPYELEITALLENPRPEFDFS---NVDLDLQRS 106
HA N + HPYE EI +P P+ +S V+ +
Sbjct: 169 RSKPHAIAPLSESLGEAGPNDTITFYKHPYETEIR---NSPYPQSTYSISPPVEYKSFDA 225
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-A 165
+ +V+T ++ + L + A+D E H + S+ G L+QIST +D++VDT+
Sbjct: 226 TTATFVDTLEGVHSMLAELKEATEIAIDLEHHDVHSYHGLVCLMQISTRDQDWIVDTLKP 285
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
+E+ +L F DP + KV HGS D++WLQRD +Y+V LFDT L+ P++SL
Sbjct: 286 WREELQVLNEVFTDPKILKVLHGSTMDIIWLQRDLGLYIVGLFDTYHGSVALNYPKRSLK 345
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
+LLE + K Q DWR RPL M YA++D HYLLYI + L ENS
Sbjct: 346 FLLEKFVNFKAEKIYQMADWRLRPLLPGMFDYARSDTHYLLYIYDHIRNSLV----ENST 401
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSV 342
++VLE SR+ LQ Y + + E+ G + R S++ S
Sbjct: 402 PAHKLVDYVLEKSRQE---ALQRYERPVYNAETGEGGGGWHDVLIR-------NSTLFSR 451
Query: 343 TQDLV-RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
Q V R + WRD +AR DE ++++LS Q++ +A+ P + ++ TI+
Sbjct: 452 EQFAVFRAVHQWRDKLARSEDEGVQYILSKQSLFKIAHAMPLDPASLFRTIS 503
>gi|169767462|ref|XP_001818202.1| exosome component 3'-5' exonuclease [Aspergillus oryzae RIB40]
gi|83766057|dbj|BAE56200.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871959|gb|EIT81108.1| exosome 3'-5' exoribonuclease [Aspergillus oryzae 3.042]
Length = 760
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 184/371 (49%), Gaps = 45/371 (12%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEK------------SSGSHPYELEITALLENPRPEF 94
PKPQ F+R + + SPFK + K SS +PYE EI A PE
Sbjct: 146 PKPQLYFERQVDNADDSPFKPLLRTKPHAVVPLEKSVESSDRNPYETEIRAAR---YPES 202
Query: 95 DF---SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQ 151
+ S V S + +V+T + E+ L A+D E H + S+ G +L+Q
Sbjct: 203 TYAVSSPVPYQPWESTTATFVDTLEGVKEMLEELKSAKEIAIDLEHHDVHSYQGLVSLMQ 262
Query: 152 ISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT 210
IST +D++VDT+ +E+ +L FADP + KVFHGS D++WLQRD +YVV +FDT
Sbjct: 263 ISTRDKDWVVDTLKPWREELQMLNEVFADPSILKVFHGSSMDIIWLQRDLGLYVVGMFDT 322
Query: 211 AKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
A L+ P++SL +LL+ + +K Q DWR RP+P M YA++D HYLL+I
Sbjct: 323 YHAACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIFD 382
Query: 271 CLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLL 330
L EL ENS ++ ++VLE S+ LQ + E P +AA
Sbjct: 383 HLRNEL----IENSTPENNLIDYVLEKSKDE---ALQRF----ERSPYDAATG------- 424
Query: 331 NGQGG--------VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
G GG + +S + + + WRD +AR DE ++ V + +A+ P
Sbjct: 425 QGPGGWYDYLSRNPAVLSKEQFAVFKAVHQWRDAVAREEDEGVQCVFPKHVLFKVAHAMP 484
Query: 383 ANRTDVYTTIA 393
+ ++ T++
Sbjct: 485 LDLGTLFRTLS 495
>gi|347827584|emb|CCD43281.1| hypothetical protein [Botryotinia fuckeliana]
Length = 823
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 173/331 (52%), Gaps = 31/331 (9%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE EI +A+ E P + V+ S S +V+T + E+ L
Sbjct: 191 HPYETEILQLQYPSAMYEKAEP-IKYLPVE-----STSATFVDTYEGVLEMLEELKGATE 244
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGS 189
AVD E H RS++G +L+Q+ST ++D++VDT+ ++ +L FADP + KVFHG+
Sbjct: 245 IAVDLEHHDTRSYVGLVSLMQVSTREKDWIVDTLKPWRQQLQVLNEVFADPNIIKVFHGA 304
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D++WLQRD +YVV LFDT AC L SLA+LL+ Y +K Q DWR RP
Sbjct: 305 YMDIVWLQRDLGLYVVGLFDTHYACRRLGFAGGSLAFLLKKYIDFDADKKYQLADWRIRP 364
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK------FNFVLEASRRSNT 303
LP EM YA+ D H+LLYI L EL + + PD + + VL+ S+ ++
Sbjct: 365 LPEEMFFYARADTHFLLYIFDNLRNELLDAPDVET--PDAETPAATSMDIVLQKSKETSL 422
Query: 304 VCL--QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
+ Q+Y E PG +F L+ + +SS + + + AWRD +AR
Sbjct: 423 LRYERQLYNAESGKGPGG------WFSLIYKTPAL--LSSEQFSVFKAVHAWRDQIARKD 474
Query: 362 DESLRFVLSDQAIIALANKAPANRTDVYTTI 392
D+S+ FV+S+ ++ LA P + + + I
Sbjct: 475 DDSINFVMSNSVVVNLAKFMPMDMIALLSII 505
>gi|194900862|ref|XP_001979974.1| GG21034 [Drosophila erecta]
gi|190651677|gb|EDV48932.1| GG21034 [Drosophila erecta]
Length = 900
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 175/360 (48%), Gaps = 48/360 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------------------SGSHPYELEITAL-- 86
+PQ FK + +++ +PF KEK S HPYE E+
Sbjct: 191 RPQTQFKEPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDTGNIHSYLHPYEFELLKFQP 250
Query: 87 ----LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRS 142
L+ +P D +L + V+T +L + L + A+D E HS R+
Sbjct: 251 LADQLQKQKPVLPALMADTEL------MVVDTVEKLQQALEELRQAPQIAIDVEHHSYRT 304
Query: 143 FLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
F+G T L+Q+ST +DY+ DT+ L +++ IL DP K+ HG+D D+ WLQRD +
Sbjct: 305 FMGITCLVQMSTRSKDYIFDTLILREDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSL 364
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
Y+VN+FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D
Sbjct: 365 YIVNMFDTHRAAKALNLARLSLAYLLKYYLDLDVDKSLQLADWRMRPLPQQLVDYARQDT 424
Query: 263 HYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAA 322
H+L+Y+ + + +L QQ + + ++S VC + Y K P
Sbjct: 425 HFLIYVYERMTNDLLQQQTDTG--------LLASVYQQSTDVCKKRYNK-----PHIGPE 471
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
S + + S + +R + WRD AR+ DES +VL + ++ +A P
Sbjct: 472 SHLDL----VRKTKRSFDNRQLYALRGIFEWRDATARLEDESYGYVLPNHMMLQIAESLP 527
>gi|161078302|ref|NP_001097795.1| Rrp6 [Drosophila melanogaster]
gi|158030263|gb|AAF55107.3| Rrp6 [Drosophila melanogaster]
Length = 900
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 42/357 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALLE 88
+PQ F+ + +++ +PF KEK S HPYE E LL+
Sbjct: 191 RPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHPYEFE---LLK 247
Query: 89 NPRPEFDFSN---VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLG 145
PE F V L + V+T +L + L + A+D E HS R+F+G
Sbjct: 248 FQPPEEQFQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMG 307
Query: 146 FTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
T L+Q+ST +DY+ DT+ L D++ IL DP K+ HG+D D+ WLQRD +Y+V
Sbjct: 308 ITCLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIV 367
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
N+FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D H+L
Sbjct: 368 NMFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFL 427
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI 325
+Y+ + +L QQ E + ++S VC + Y K P S +
Sbjct: 428 IYVYGRMTNDLLQQHAEPG--------LLGSVYQQSTDVCKKRYNK-----PHIGPESHL 474
Query: 326 FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 475 DL----VRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLP 527
>gi|154301232|ref|XP_001551029.1| hypothetical protein BC1G_10286 [Botryotinia fuckeliana B05.10]
Length = 823
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 173/331 (52%), Gaps = 31/331 (9%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE EI +A+ E P + V+ S S +V+T + E+ L
Sbjct: 191 HPYETEILQLQYPSAMYEKAEP-IKYLPVE-----STSATFVDTYEGVLEMLEELKGATE 244
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGS 189
AVD E H RS++G +L+Q+ST ++D++VDT+ ++ +L FADP + KVFHG+
Sbjct: 245 IAVDLEHHDTRSYVGLVSLMQVSTREKDWIVDTLKPWRQQLQVLNEVFADPNIIKVFHGA 304
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D++WLQRD +YVV LFDT AC L SLA+LL+ Y +K Q DWR RP
Sbjct: 305 YMDIVWLQRDLGLYVVGLFDTHYACRRLGFAGGSLAFLLKKYIDFDADKKYQLADWRIRP 364
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK------FNFVLEASRRSNT 303
LP EM YA+ D H+LLYI L EL + + PD + + VL+ S+ ++
Sbjct: 365 LPEEMFFYARADTHFLLYIFDNLRNELLDAPDVET--PDAETPAATSMDIVLQKSKETSL 422
Query: 304 VCL--QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
+ Q+Y E PG +F L+ + +SS + + + AWRD +AR
Sbjct: 423 LRYERQLYNAESGKGPGG------WFSLIYKTPAL--LSSEQFSVFKAVHAWRDQIARKD 474
Query: 362 DESLRFVLSDQAIIALANKAPANRTDVYTTI 392
D+S+ FV+S+ ++ LA P + + + I
Sbjct: 475 DDSINFVMSNSVVVNLAKFMPMDMIALLSII 505
>gi|307107266|gb|EFN55509.1| hypothetical protein CHLNCDRAFT_133914 [Chlorella variabilis]
Length = 1092
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 162/335 (48%), Gaps = 52/335 (15%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +++T L A L+ AVD E HS RSF GF L+Q+ST ED ++DT+AL
Sbjct: 248 FTFIDTVPALRAAAQRLAAARELAVDLEAHSYRSFQGFCCLMQLSTRSEDLVIDTLALRA 307
Query: 169 EIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
+ L P FADPGV KV HG+D+DV WLQRDF +++ NLFDT +A VL LA+L
Sbjct: 308 HVGPALAPIFADPGVVKVLHGADSDVAWLQRDFGLFLANLFDTGQAARVLGMRGHGLAHL 367
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNE----- 282
L+ YCG +K Q DWR RPL EML YA++D H+LLY L A L + G+
Sbjct: 368 LDFYCGFKADKRFQLADWRVRPLTPEMLHYARSDTHHLLYCYDKLKAALAEAGDSVPEHL 427
Query: 283 ------------NSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRL- 329
+ VLE SRR +CL Y KE S F L
Sbjct: 428 AVELPPAASTAAAAAGAGAALATVLERSRR---LCLLQYDKERYS-------PLAFLDLA 477
Query: 330 --LNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTD 387
LN +S++ + L WRD +AR DES ++L ++ LA P RT
Sbjct: 478 SKLN-----ASLTDEQLSVFGALYEWRDSVARQLDESTGYLLPRAQLLKLAQAMP--RT- 529
Query: 388 VYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDV 422
L L +L SPV+ + +V
Sbjct: 530 -------------VLELHKALGRSSPVISRQVAEV 551
>gi|225679037|gb|EEH17321.1| exosome component 10 [Paracoccidioides brasiliensis Pb03]
Length = 827
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 195/412 (47%), Gaps = 52/412 (12%)
Query: 17 AAISILFTRQQRRRRKLNQCP---QYSCYLQSEP----KPQHNFKRVLADNSYSPFK--- 66
I L Q++R L++ P Q+ P KPQ F +N SPFK
Sbjct: 109 GVIKKLSPSQEQRSAALSKRPATAQFPSVYDFGPSKISKPQLLFTSRPNNNDTSPFKPLL 168
Query: 67 ----HA-------------NKEKSSGSHPYELEITALLENPRPEFDFS---NVDLDLQRS 106
HA N + HPYE EI +P P+ +S V+ +
Sbjct: 169 RSKPHAIAPLSESLGEAGPNGTITFYKHPYETEIR---NSPYPQSTYSISPPVEYKSFDA 225
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA- 165
+ +V+T ++ + L + A+D E H + S+ G L+QIST +D++VDT+
Sbjct: 226 TTATFVDTLEGVHSMLAELKEATEIAIDLEHHDVHSYHGLVCLMQISTRDQDWIVDTLKP 285
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
+E+ +L F DP + KV HGS D++WLQRD +Y+V LFDT L+ P++SL
Sbjct: 286 WREELQVLNEVFTDPKILKVLHGSTMDIIWLQRDLGLYIVGLFDTYHGSVALNYPKRSLK 345
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
+LLE + K Q DWR RPL M YA++D HYLLYI + L ENS
Sbjct: 346 FLLEKFVNFKAEKIYQMADWRLRPLLPGMFDYARSDTHYLLYIYDHIRNSLV----ENST 401
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSV 342
++VLE SR+ LQ Y + + E+ G + R S++ S
Sbjct: 402 PAHKLVDYVLEKSRQE---ALQRYERPVYNAETGEGGGGWHDVLIR-------NSTLFSR 451
Query: 343 TQDLV-RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
Q V R + WRD +AR DE ++++LS Q++ +A+ P + ++ TI+
Sbjct: 452 EQFAVFRAVHQWRDKLARSEDEGVQYILSKQSLFKIAHAMPLDPASLFRTIS 503
>gi|261327471|emb|CBH10446.1| ribosomal RNA processing protein 6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 738
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 171/356 (48%), Gaps = 38/356 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSS-------GSHPYELEITA--------LLENPRP 92
+PQ F+ + DNS +PF+ ++ G HP+ I A LL+ P
Sbjct: 179 RPQLTFEHPV-DNSPTPFRPVYYDEKGVRHVGEPGVHPFAERIKAVSVPSEQLLLKTETP 237
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
L +V+T L + L E AVD E H S+ GFT L+QI
Sbjct: 238 YLSLVTCPL--------TFVDTVEDLEAVVAVLLNETEIAVDLEHHDFYSYQGFTCLMQI 289
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
ST +D++VD + + + ++ P F P + KVFHG+ DV WLQ+DF +Y+VNLFDT+
Sbjct: 290 STRTQDFIVDCLKVRANMYLMAPVFLQPNIVKVFHGAREDVRWLQKDFGLYIVNLFDTSI 349
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A + L P SLA+ ++ +C V NK Q DWR RP+PAEM+ YAQ D H+LLY+ L
Sbjct: 350 ALQNLHMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPIPAEMVSYAQQDTHFLLYVYDRL 408
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
+Q N N +L + S + L+ Y K + R L G
Sbjct: 409 -----KQLLLNCEARASVGNMLLHVFQESRLLSLERYEK--PHLDPDVTYKQALGRSLGG 461
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+SS + R + WRD+ AR D+S V+ ++++A K P + +V
Sbjct: 462 ------LSSSQLQVAREIFNWRDMAAREADDSPSAVMHISCVLSIATKLPTSANEV 511
>gi|367031894|ref|XP_003665230.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
gi|347012501|gb|AEO59985.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
Length = 860
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 198/399 (49%), Gaps = 48/399 (12%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFK-------HA--------- 68
R+ +R R +S + KPQ+ F+R + + P+K HA
Sbjct: 123 RELKRSRSTTSRLDWSMKRANILKPQNAFERKIDNFDSGPWKPLMTSKPHARVPLETSLD 182
Query: 69 ----NKEKSSGSHPYELEITALLENPRPEFDFSNVD----LDLQRSDSFVWVETKSQLNE 120
+ ++ HPYE EIT + PE + + + L ++ + + +WV+T + E
Sbjct: 183 TFVDEEGRTQYKHPYEQEITNM---QYPEQVYRSCEPIKYLPMETTKA-IWVDTYEGVLE 238
Query: 121 LANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT-IALHDEISILQPFFAD 179
+ L + AVD E H R++ G +L+QIST ++D++VDT + ++ +L FAD
Sbjct: 239 MLQELKQATEIAVDLEHHDFRTYAGLLSLMQISTREKDWIVDTLVPWRHKLEVLNEVFAD 298
Query: 180 PGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKF 239
P + KV HG+ DV+WLQRD +Y+V LFDT A + L KSLA+LL+ + +K
Sbjct: 299 PKIVKVLHGAFMDVIWLQRDLGLYIVGLFDTFYASDTLGYAGKSLAFLLKKFADFDADKK 358
Query: 240 LQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASR 299
Q DWR RPLP EM YA++D H+LLYI L EL + ++N+ PD N + +
Sbjct: 359 YQLADWRIRPLPEEMFYYARSDTHFLLYIYDMLRNELAELASQNN--PDG--NPIDRVIQ 414
Query: 300 RSNTVCLQVYTKEI---ESYPGEAAASSIFFR---LLNGQGGVSSISSVTQDLVRRLCAW 353
+S V LQ Y + E+ G + + L NG+ + + + W
Sbjct: 415 KSKEVSLQRYEHPVCDPETGAGNRGWYNTLIKSPTLYNGEQFA---------VYKAVHKW 465
Query: 354 RDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
RD +AR DES F+++ Q + +A P + +++ +
Sbjct: 466 RDDVARQEDESPFFIMTQQVLSDIARIIPTDMKALWSLL 504
>gi|302833517|ref|XP_002948322.1| hypothetical protein VOLCADRAFT_58009 [Volvox carteri f.
nagariensis]
gi|300266542|gb|EFJ50729.1| hypothetical protein VOLCADRAFT_58009 [Volvox carteri f.
nagariensis]
Length = 191
Score = 176 bits (445), Expect = 8e-41, Method: Composition-based stats.
Identities = 87/168 (51%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
VWV+ + L + + L AVD E HS RSF GFT L+QIST DY+VDT+AL ++
Sbjct: 1 VWVDGEEALAGMVSELEAAEELAVDLEHHSHRSFQGFTCLMQISTRTTDYVVDTLALRNQ 60
Query: 170 IS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+ L FADP V KVFHG+D+DV WLQRDF +++VN+FDT +A VL P LAYLL
Sbjct: 61 LGPALARVFADPRVVKVFHGADSDVDWLQRDFSLFLVNMFDTGQAARVLGLPSFGLAYLL 120
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
E+ CGV +K Q DWR RPL ML YA+ D HYLLY+ L +L
Sbjct: 121 ESICGVQADKRYQMADWRVRPLSPPMLHYARCDTHYLLYVYDKLREQL 168
>gi|159127645|gb|EDP52760.1| exosome complex exonuclease Rrp6, putative [Aspergillus fumigatus
A1163]
Length = 764
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 183/374 (48%), Gaps = 46/374 (12%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HA----------NKEKSSGSHPYELEITALLEN 89
PKPQ F+R + SPFK HA +PYE EI A +
Sbjct: 146 PKPQLLFERPPDNTDVSPFKPLLRIKPHAIVPLEDSLKLTDPAQGYRNPYETEIQAA-KY 204
Query: 90 PRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P + S V+ S + +V+T + E+ + L A+D E H + S+ G +
Sbjct: 205 PESTYTVSPPVEYQPFESTAATFVDTLEGVKEMLSELKSAKEIAIDLEHHDVHSYHGLVS 264
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ +E+ IL FADPG+ KV HGS D++WLQRD +YVV +
Sbjct: 265 LMQISTRDKDWVVDTLKPWREELQILNEVFADPGILKVLHGSSMDIIWLQRDLGLYVVGM 324
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT A L+ P++SL +LL + +K Q DWR RPLP+ M YA++D HYLLY
Sbjct: 325 FDTYHAACALNYPKRSLKFLLHKFVNFEADKRYQMADWRIRPLPSGMFDYARSDTHYLLY 384
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I L EL ENS + ++VLE S+ LQ Y + P AA+
Sbjct: 385 IYDHLRNELL----ENSTPDHNLVDYVLEQSKNE---ALQRYER-----PVYDAATG--- 429
Query: 328 RLLNGQGG--------VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
GQGG + +S + + + WRD +AR DE ++ V + +A
Sbjct: 430 ---QGQGGWYDYLYRNPAVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHILFKIAQ 486
Query: 380 KAPANRTDVYTTIA 393
P ++ ++ T++
Sbjct: 487 VMPLDQGTLFRTLS 500
>gi|70999828|ref|XP_754631.1| exosome complex exonuclease Rrp6 [Aspergillus fumigatus Af293]
gi|66852268|gb|EAL92593.1| exosome complex exonuclease Rrp6, putative [Aspergillus fumigatus
Af293]
Length = 764
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 183/374 (48%), Gaps = 46/374 (12%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HA----------NKEKSSGSHPYELEITALLEN 89
PKPQ F+R + SPFK HA +PYE EI A +
Sbjct: 146 PKPQLLFERPPDNTDVSPFKPLLRIKPHAIVPLEDSLKLTDPAQGYRNPYETEIQAA-KY 204
Query: 90 PRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P + S V+ S + +V+T + E+ + L A+D E H + S+ G +
Sbjct: 205 PESTYTVSPPVEYQPFESTAATFVDTLEGVKEMLSELKSAKEIAIDLEHHDVHSYHGLVS 264
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ +E+ IL FADPG+ KV HGS D++WLQRD +YVV +
Sbjct: 265 LMQISTRDKDWVVDTLKPWREELQILNEVFADPGILKVLHGSSMDIIWLQRDLGLYVVGM 324
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT A L+ P++SL +LL + +K Q DWR RPLP+ M YA++D HYLLY
Sbjct: 325 FDTYHAACALNYPKRSLKFLLHKFVNFEADKRYQMADWRIRPLPSGMFDYARSDTHYLLY 384
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I L EL ENS + ++VLE S+ LQ Y + P AA+
Sbjct: 385 IYDHLRNELL----ENSTPDHNLVDYVLEQSKNE---ALQRYER-----PVYDAATG--- 429
Query: 328 RLLNGQGG--------VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
GQGG + +S + + + WRD +AR DE ++ V + +A
Sbjct: 430 ---QGQGGWYDYLYRNPAVLSKEQFAVFKAVHQWRDEVAREEDEGVQCVFPKHILFKIAQ 486
Query: 380 KAPANRTDVYTTIA 393
P ++ ++ T++
Sbjct: 487 VMPLDQGTLFRTLS 500
>gi|195108841|ref|XP_001999001.1| GI24274 [Drosophila mojavensis]
gi|193915595|gb|EDW14462.1| GI24274 [Drosophila mojavensis]
Length = 901
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 172/355 (48%), Gaps = 38/355 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------------------SGSHPYELEITALLE 88
+PQ FK + +++ +PF+ EK S HPYE E+ E
Sbjct: 197 RPQMQFKVPVDNSAQNPFRPRLTEKPNSLKPLALLPEYDDTGNVVSFLHPYEFELLKF-E 255
Query: 89 NPRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P + L + + + V++ L + L K A+D E HS R+F+G T
Sbjct: 256 PPSEQLQKQKPVLPAPPAQTELMLVDSVDALQQALTELRKASQIAIDVEHHSYRTFMGIT 315
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+Q+ST +DY+ DT+ L +E+ IL DP V K+ HG+D D+ WLQRD +Y+VN+
Sbjct: 316 CLVQMSTRTKDYIFDTLKLREEMHILNLVLTDPKVLKILHGADLDIEWLQRDLSLYIVNM 375
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP +++ YA+ D HYL+Y
Sbjct: 376 FDTHRAAKALNMARLSLAFLLKHYLDLDVDKSLQLADWRMRPLPQKLIDYARQDTHYLIY 435
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I + L +L Q + + + S VC + YTK P S +
Sbjct: 436 IYERLTNDLLQS--------EQGLQGLRMVYQMSTDVCKKRYTK-----PHIGPDSHLDL 482
Query: 328 RLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 483 ----VRKTKRSFDNRQLHALRGIFVWRDSTARQEDESYGYVLPNHMMLQIAESLP 533
>gi|46123343|ref|XP_386225.1| hypothetical protein FG06049.1 [Gibberella zeae PH-1]
Length = 807
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI + R + + + +V+T + E+ L K AVD E
Sbjct: 190 HPYEHEIVRMAYPKRVSREAEPIMYQPVDTTEATYVDTYEGVLEMLGELMKAKEIAVDLE 249
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H RS++G +L+QIST ++D++VDT+ ++ +L F +P + KVFHG+ D++W
Sbjct: 250 HHDFRSYVGLVSLMQISTREKDWIVDTLQPWRHKLEVLNQVFTNPKIVKVFHGAYMDIIW 309
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YV LFDT AC L+ P KSLAYLL + +K Q DWR RPLP EML
Sbjct: 310 LQRDLGLYVNGLFDTFFACGQLNYPAKSLAYLLSKFVDFDADKKYQLADWRLRPLPQEML 369
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA++D HYLLYI + EL ++ + D LE SR + + + E+
Sbjct: 370 YYARSDTHYLLYIYDRVRNEL-VAASDKTDADKDLIGRALEKSREQSLSRYEHPDYDEET 428
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
G SS F+ + S + R L WRD AR DES FVL ++ I
Sbjct: 429 GEGSRGWSSYIFK-----NSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNRDIS 483
Query: 376 ALANKAPAN 384
+A P +
Sbjct: 484 EIARINPPD 492
>gi|408396401|gb|EKJ75559.1| hypothetical protein FPSE_04202 [Fusarium pseudograminearum CS3096]
Length = 1034
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI + R + + + +V+T + E+ L K AVD E
Sbjct: 417 HPYEHEIVRMAYPKRVSREAEPIMYQPVDTTEATYVDTYEGVLEMLGELMKAKEIAVDLE 476
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H RS++G +L+QIST ++D++VDT+ ++ +L F +P + KVFHG+ D++W
Sbjct: 477 HHDFRSYVGLVSLMQISTREKDWIVDTLQPWRHKLEVLNQVFTNPKIVKVFHGAYMDIIW 536
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YV LFDT AC L+ P KSLAYLL + +K Q DWR RPLP EML
Sbjct: 537 LQRDLGLYVNGLFDTFFACGQLNYPAKSLAYLLSKFVDFDADKKYQLADWRLRPLPQEML 596
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA++D HYLLYI + EL ++ + D LE SR + + + E+
Sbjct: 597 YYARSDTHYLLYIYDRVRNELV-AASDKTDADKDLIGRALEKSREQSLSRYEHPDYDQET 655
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
G SS F+ + S + R L WRD AR DES FVL ++ I
Sbjct: 656 GEGSRGWSSYIFK-----NSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNRDIS 710
Query: 376 ALANKAPAN 384
+A P +
Sbjct: 711 EIARINPPD 719
>gi|157876102|ref|XP_001686412.1| putative exosome subunit rrp6p homologue [Leishmania major strain
Friedlin]
gi|68129486|emb|CAJ08029.1| putative exosome subunit rrp6p homologue [Leishmania major strain
Friedlin]
Length = 742
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 174/347 (50%), Gaps = 28/347 (8%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------SGSHPYELEITAL---LENPRPEFDFS 97
+PQ F + DNS +PF + S +G HP+E I A P +
Sbjct: 165 RPQLLFDTPV-DNSAAPFVPHYYDASGQYHVGVAGQHPFESVIKAFSIPASQILPRAEVP 223
Query: 98 NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
V LD + +V+T + + + L AVD E H S+ GFT L+QIST +E
Sbjct: 224 PVPLD---ACPLTFVDTSAAMQAMIEKLLLSREIAVDLEHHDFYSYQGFTCLMQISTREE 280
Query: 158 DYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
D++VD + L + L P F +P + KV HG+ D+ WLQ+DF +YVVNLFDT A + L
Sbjct: 281 DFIVDCLKLRSSMGALAPVFLNPSILKVLHGAREDIRWLQKDFSLYVVNLFDTGVALQTL 340
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
P SLA+ ++ +C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L
Sbjct: 341 HMPY-SLAFAVDHFCQVKLNKKYQTADWRVRPLSAEMVHYARQDTHFLLYVHDRLKALLL 399
Query: 278 QQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS 337
S + ++ S + LQ+Y K P E +++ G+ +S
Sbjct: 400 NSEGRASIG-----SVLVHVYNESKQLSLQIYEKP-NVVPEET------YKMALGR-SLS 446
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ V + + R + WRD AR D+S VL +++++A+K P
Sbjct: 447 GLNKVQEKVARDVFNWRDSAAREVDDSPTAVLHLSSVLSIASKLPTT 493
>gi|71657562|ref|XP_817295.1| ribosomal RNA processing protein 6 [Trypanosoma cruzi strain CL
Brener]
gi|70882476|gb|EAN95444.1| ribosomal RNA processing protein 6, putative [Trypanosoma cruzi]
Length = 768
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 148/278 (53%), Gaps = 14/278 (5%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+V+ L ++ L KE AVD E HS S+ GFT L+QIST ED L+D + L +
Sbjct: 270 FVDATVDLEDVVALLLKEKEIAVDLEHHSFYSYQGFTCLMQISTRSEDILIDCLKLRSSM 329
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
+L P F +P + KV HG+ D+ WLQ+DF +Y+VN FDT A + L P LA+ ++
Sbjct: 330 HLLAPVFLNPNILKVLHGAREDIRWLQKDFGLYLVNFFDTGIALQTLHMPH-GLAFAVDH 388
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+C V +K Q DWR RP+PAEM YA+ D H+LLY+ L L +E +
Sbjct: 389 FCQVKLDKKYQTADWRIRPIPAEMATYARQDTHFLLYVYDRLKTLL--LNSEGRASIGNL 446
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
VL SRR + L++Y K P +S L GG+SS+ + R +
Sbjct: 447 LVHVLNESRR---LSLEIYEK-----PQLDPDASYKIALGRSLGGLSSMQ---MKVAREI 495
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
WRD +AR D+S VL A++A+A K P + DV
Sbjct: 496 FNWRDAIAREVDDSPPAVLHLSAVLAIATKLPTSANDV 533
>gi|169234702|ref|NP_001108472.1| PM-Scl autoantigen-like protein [Bombyx mori]
gi|18700467|dbj|BAB85201.1| PM-Scl autoantigen-like protein [Bombyx mori]
gi|22474519|dbj|BAC10623.1| PM-Scl autoantigen-like protein [Bombyx mori]
Length = 451
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 162/317 (51%), Gaps = 29/317 (9%)
Query: 77 HPYELEITALLENPRPEF----DFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFA 132
HPY++E+ + NP +F + F +++ +S+L+EL L A
Sbjct: 85 HPYQMELD--MYNPPSQFIDPDPEPPMFPPPLEETKFTYIDIESKLDELVEHLMAVEQIA 142
Query: 133 VDTEQHSLRSF------LGFTALIQIST-EKEDYLVDTIALHDEISILQPFFADPGVCKV 185
VD E HS R LG T LIQIST E D+++D +A+ + I L F DP KV
Sbjct: 143 VDVEHHSYRDLSGLYLILGITCLIQISTDEGGDFIIDALAVREHIHKLNVVFTDPKKLKV 202
Query: 186 FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDW 245
FHG+D+DV+WLQRDF +Y+V LFDT A + L P SL +LL YCGV T+K + DW
Sbjct: 203 FHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTYRLADW 262
Query: 246 RQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVC 305
R RPLP +++YA+ D HYLLY+ + + ++ ++ + N +L S C
Sbjct: 263 RIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQT-------NMLLSVFEDSRQTC 315
Query: 306 LQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
Y KE+ + + ++ R + + ++ L WRD AR DES
Sbjct: 316 ASTYNKEVIH---DESHIPLYIR------SKKNFDNQQMAALKMLYKWRDSQARQLDEST 366
Query: 366 RFVLSDQAIIALANKAP 382
++L + +++L+ P
Sbjct: 367 TYLLPNHMLLSLSENLP 383
>gi|149244804|ref|XP_001526945.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449339|gb|EDK43595.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 826
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 167/323 (51%), Gaps = 45/323 (13%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE EI +A+LE P + +WV+ + QL+ + L
Sbjct: 199 HPYEYEIDKQPYPSAVLEKSTP------IQPQEWTKTEAIWVDNEEQLDAMIEELKAASE 252
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E H RS+ G L+QIS ++D+++DT+AL DE+S L F + + KVFHG+
Sbjct: 253 IAVDLEHHDYRSYYGLVCLMQISNREKDWVIDTLALRDELSKLNVIFTNHEIVKVFHGAF 312
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D++WLQRD +Y+V+LFDT A L + SL YLL+T+ T+K Q DWR RPL
Sbjct: 313 MDIIWLQRDLGLYIVSLFDTYHASRQLGFAKFSLQYLLDTFAHFRTSKKYQLADWRIRPL 372
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
PA ML YA++D H+LLYI L +L Q DK + VL R+ + YT
Sbjct: 373 PAPMLAYARSDTHFLLYIYDQLRNKLIDQ---------DKLSKVLFELRQVAKRRFE-YT 422
Query: 311 K--EIESYPGEAAAS-------------SIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
K + + PG S SI ++ ++ S + +V L +RD
Sbjct: 423 KYRPLSNTPGNGQVSCPIMASNPKEPWGSIMYQY--------NVPSFKKHIVEVLYKYRD 474
Query: 356 LMARVHDESLRFVLSDQAIIALA 378
+AR DES+R+++ +Q +++L+
Sbjct: 475 AVAREEDESVRYIMPNQLLVSLS 497
>gi|340053178|emb|CCC47466.1| putative ribosomal RNA processing protein 6 [Trypanosoma vivax
Y486]
Length = 709
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 176/351 (50%), Gaps = 28/351 (7%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSS-------GSHPYELEITALLENPRPEFDF---S 97
+PQ F R + DNS +PF +++ G HP+ +I + P PE +
Sbjct: 143 RPQLTFDRPV-DNSSAPFCPMYHDENGTFHVGEPGVHPFAEQIKS---APIPEEQLLRKA 198
Query: 98 NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
S +V+T + L +L L + AVD E H S+ GFT L+QIST +
Sbjct: 199 ETPFLPLSSCPLTFVDTVAGLEDLVKVLLIQGEIAVDLEHHDFYSYQGFTCLVQISTRTQ 258
Query: 158 DYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
D+++D + L + +L P F P + KV HG+ D+ WLQ+DF IYVVNLFDT+ A + L
Sbjct: 259 DFIIDCLKLRASMHLLSPVFLSPRIIKVLHGAREDIRWLQKDFGIYVVNLFDTSIALQQL 318
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
P SLA+ ++ +C V +K Q DWR RP+P EM+ YAQ D H+LLYI L A L
Sbjct: 319 HMPY-SLAFAVDHFCQVKLDKKYQTADWRVRPIPIEMVSYAQQDTHFLLYIYDRLCALLL 377
Query: 278 QQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS 337
N N +L + S + L+ Y K + + +++ G+ +
Sbjct: 378 -----NCEARPSVGNLLLHVFQESRLLSLERYEKPV-------LEPDVTYKVALGR-SLG 424
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+S + + + WRD AR D+S V+ +++++A + P++ DV
Sbjct: 425 GLSKAQLQVAQEIFNWRDGAAREADDSPSAVMHLSSVLSIATRLPSSANDV 475
>gi|320588480|gb|EFX00949.1| exosome complex exonuclease [Grosmannia clavigera kw1407]
Length = 1631
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 172/324 (53%), Gaps = 16/324 (4%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDL---QRSDSFVWVETKSQLNELANALSKEFFFAV 133
HPYE EIT + PE + + L +WV+T + + L + AV
Sbjct: 196 HPYETEITKMR---YPEAVYHKSEPILYQPTEGTKAIWVDTFEGVQAMLEELRQADVIAV 252
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDND 192
D E H R++ G +L+QIST ++D++VDT+ + IL FADP KVFHG+ +D
Sbjct: 253 DLEHHDFRTYTGLLSLMQISTREKDWVVDTLTPWRHRLEILNEVFADPTKIKVFHGATSD 312
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +Y+V LFDT AC+ L P +SLAYLL+ + +K Q DWR RPLP
Sbjct: 313 IVWLQRDLGLYIVGLFDTYFACDCLEYPARSLAYLLKKFVDFDADKKYQMADWRIRPLPE 372
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF-NFVLEASRRSNTVCLQVYTK 311
EML YA++D H+LLY+ + EL ++ + P+ +VL S+ ++ + +V
Sbjct: 373 EMLYYARSDTHFLLYVYDMVRNELAEKSEK--LLPEASLTGYVLRRSKETSMLRHEVALC 430
Query: 312 EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSD 371
+ E+ G + R S ++S + + + WRD +AR DES +V+
Sbjct: 431 DPETGLGSRGWLNSLMRTY------SMLNSSQFAVFKAIFRWRDDLARRLDESPGYVMPI 484
Query: 372 QAIIALANKAPANRTDVYTTIAQA 395
+++ +A P++R +++ + A
Sbjct: 485 RSVGDIARILPSDRKAMWSLLNNA 508
>gi|407404412|gb|EKF29876.1| hypothetical protein MOQ_006321 [Trypanosoma cruzi marinkellei]
Length = 713
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 176/360 (48%), Gaps = 46/360 (12%)
Query: 48 KPQHNFKRVLADNSYSPF----------KHANKEKSSGSHPYELEITALLENPRPEFDFS 97
+PQ F+ + DNS +PF +H K G HP+ E+ + P +
Sbjct: 146 RPQLTFEHPV-DNSPTPFCPVYYDEKGKRHVGK---PGIHPFA-ELIKNMSMPEEQL--- 197
Query: 98 NVDLDLQRSDS---------FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
++R ++ +V+ L E+ L KE AVD E HS S+ GFT
Sbjct: 198 -----IRRVETPYLPLAQCPLRFVDATVDLEEVVALLLKEKEIAVDLEHHSFYSYQGFTC 252
Query: 149 LIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLF 208
L+QIST ED L+D + L + +L P F + + KV HG+ D+ WLQ+DF +Y+VN F
Sbjct: 253 LMQISTRSEDILIDCLKLRSSMHLLAPVFLNSNILKVLHGAREDIRWLQKDFGLYLVNFF 312
Query: 209 DTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
DT A + L P LA+ ++ +C V NK Q DWR RP+PAEM+ YA+ D H+LLY+
Sbjct: 313 DTGIALQTLHMPH-GLAFAVDHFCQVKLNKKYQTADWRIRPIPAEMVAYARQDTHFLLYV 371
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
L L +E + VL SRR + L++Y K P +S
Sbjct: 372 YDRLKTLLLN--SEGRASIGNLLVHVLNESRR---LSLEIYEK-----PQLDPDASYKVA 421
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L GG+SS+ + R + WRD AR D+S VL A++A+A K P + DV
Sbjct: 422 LGRSLGGLSSMQ---LQVAREIFNWRDATAREVDDSPPAVLHLSAVLAIATKLPTSANDV 478
>gi|302916517|ref|XP_003052069.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
gi|256733008|gb|EEU46356.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
Length = 833
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 169/336 (50%), Gaps = 17/336 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI +++ R + V + WV+T + E+ L K AVD E
Sbjct: 191 HPYEREIASMVYPKRVYKEAEPVMYQPVDTTQATWVDTYEGVLEMLKELKKAKEIAVDLE 250
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H RS++G +L+QIST ++D++VDT+ ++ +L F +P + KVFHG+ D++W
Sbjct: 251 HHDFRSYIGLVSLMQISTREKDWIVDTLQPWRHKLEVLNEVFTNPKIIKVFHGAYMDMVW 310
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YV LFDT AC+ L P KSLA+LL + +K Q DWR RP+P EM+
Sbjct: 311 LQRDLGLYVNGLFDTFFACDQLHYPAKSLAFLLSKFVDFDADKQYQLADWRIRPIPEEMM 370
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA++D HYLLYI + EL +++ + N + A +S + L Y E
Sbjct: 371 YYARSDTHYLLYIYDKVRNELVATSDKSK----PETNLIERALEKSRELSLSRY--ENPG 424
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
Y E S + + ++ S + + + WRD AR DE+ +VLS + I
Sbjct: 425 YDEETGEGSRGWYGYVFKNSHMALDSEQFAVFKAVWKWRDDTARAEDENPNYVLSTRDIT 484
Query: 376 ALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSP 411
+A P + +++ L LS+SL P
Sbjct: 485 EIARLNPPDAKALHS----------LLPLSASLARP 510
>gi|195501501|ref|XP_002097822.1| GE26425 [Drosophila yakuba]
gi|194183923|gb|EDW97534.1| GE26425 [Drosophila yakuba]
Length = 900
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 174/360 (48%), Gaps = 48/360 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITAL-- 86
+PQ FK + +++ +PF KEK S HPYE E+
Sbjct: 191 RPQTQFKEPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNIQSYLHPYEFELLKFQP 250
Query: 87 ----LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRS 142
L+ +P V L + + V+T +L + L + A+D E HS R+
Sbjct: 251 AADQLQKQKP------VLPALMANTELMVVDTVEKLEQALEELRQAPQIAIDVEHHSYRT 304
Query: 143 FLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
F+G T L+Q+ST +DY+ DT+ L DE+ IL DP K+ HG+D D+ WLQRD +
Sbjct: 305 FMGITCLVQMSTRSKDYIFDTLILRDEMHILNLVLTDPKKLKILHGADLDIEWLQRDLSL 364
Query: 203 YVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDA 262
Y+VN+FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D
Sbjct: 365 YIVNMFDTHRAAKALNLARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDT 424
Query: 263 HYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAA 322
H+L+Y+ + + +L QQ + + ++S VC + Y K P
Sbjct: 425 HFLIYVYERMTNDLLQQHADPG--------LLGSVYQQSTDVCKKRYNK-----PHIGPE 471
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
S + + S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 472 SHLDL----VRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLP 527
>gi|195570818|ref|XP_002103401.1| GD20396 [Drosophila simulans]
gi|194199328|gb|EDX12904.1| GD20396 [Drosophila simulans]
Length = 896
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 171/351 (48%), Gaps = 38/351 (10%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALLE 88
+PQ F+ + +++ +PF KEK S HPYE E+ E
Sbjct: 191 RPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHPYEFELLKF-E 249
Query: 89 NPRPEFDFSNVDLD-LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P + L L + V+T +L + L + A+D E HS R+F+G T
Sbjct: 250 PPTEQLQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGIT 309
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+Q+ST +DY+ DT+ L D++ IL DP K+ HG+D D+ WLQRD +Y+VN+
Sbjct: 310 CLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVNM 369
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D H+L+Y
Sbjct: 370 FDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIY 429
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
+ + + +L QQ E + ++S VC + Y K P S +
Sbjct: 430 VYERMTNDLLQQQAEPG--------LLGSVYQQSTDVCKKRYNK-----PHIGPESHLDL 476
Query: 328 RLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+ S + +R + WRD AR DES +VL + ++ +A
Sbjct: 477 ----VRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHKMVQIA 523
>gi|425768291|gb|EKV06818.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
Pd1]
gi|425770373|gb|EKV08846.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
PHI26]
Length = 754
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 178/369 (48%), Gaps = 34/369 (9%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HA---------NKEKSSG---SHPYELEITALL 87
PKPQ F R + PFK HA K+ G HPYE EI A
Sbjct: 141 PKPQLLFDRKPDNTDMGPFKPLLKSKPHAIVPLEKCLKTKKMEGGIGYPHPYETEILAS- 199
Query: 88 ENPRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
E P+P + S V+ S + +V+T + E+ L K A+D E H + S+ G
Sbjct: 200 EYPKPVYQVSPPVEYLPFESTTATFVDTLDGVKEMLKELKKAKEIAIDLEHHDVHSYHGL 259
Query: 147 TALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
+L+QIST +D+++DT+ +++ IL FADP + KV HGS D++WLQRD +YVV
Sbjct: 260 VSLMQISTRGKDWVIDTLQPWREDLQILNEVFADPKILKVLHGSTMDIIWLQRDLGLYVV 319
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
+FDT A L P++SL +LL + +K Q DWR RPLP M YA++D HYL
Sbjct: 320 GMFDTFHAASALGFPKRSLKFLLSKFVNFEADKRYQTADWRARPLPPAMFDYARSDTHYL 379
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI-ESYPGEAAASS 324
LYI L +L E + ++V E RS LQ Y + + ++ G
Sbjct: 380 LYIYDRLRNDLIDNSTEEA----SHIDYVNE---RSKHEALQRYERPVYDAVNGHGPGG- 431
Query: 325 IFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ LL G ++ + + + WRD +AR DE + V + LA P +
Sbjct: 432 -WYDLLWRNSG--NLPKEQFAVFKAVHQWRDEVARAEDEGWQCVFPKHMLFKLATIMPLD 488
Query: 385 RTDVYTTIA 393
++ T++
Sbjct: 489 MGSLFRTLS 497
>gi|392579689|gb|EIW72816.1| hypothetical protein TREMEDRAFT_70822 [Tremella mesenterica DSM
1558]
Length = 955
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 151/303 (49%), Gaps = 34/303 (11%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ +++T QL E+ L AVD E HS SF GFT LIQIST + DY+VD I L
Sbjct: 291 YSFIDTPEQLEEMVTHLKSVTEIAVDLEYHSTHSFAGFTCLIQISTRERDYIVDAIKLRS 350
Query: 169 EI--SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
E+ L DP + KVFHGS +D+ WLQ+DF I+VV LFDT A VL+ P SLA
Sbjct: 351 ELRRDKLGGVMVDPSIVKVFHGSQSDIPWLQQDFSIFVVGLFDTFHATLVLNFPAHSLAS 410
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ------- 279
LL+ YC +K Q DWR RPLP EM YA+ D H+LLYI L L +
Sbjct: 411 LLKLYCNFDADKRYQLADWRIRPLPEEMEMYARADTHFLLYIYDKLRNALLDKSVSLLPT 470
Query: 280 --GNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF-------RLL 330
G++ S D N +E +++ + + A S I + +
Sbjct: 471 PVGDKESKTSDTAENGTVEEGHLAHSAMKETLER-------SAQTSLIMYQPNYYDEKTG 523
Query: 331 NGQGG---------VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKA 381
G GG SS + + + L +WRD +AR DES +VL + ++AL+ +
Sbjct: 524 RGSGGWREACSRWLPSSKDTEAGAVFKALHSWRDSLARNEDESPVWVLPNDKLVALSKQR 583
Query: 382 PAN 384
P+
Sbjct: 584 PST 586
>gi|342319925|gb|EGU11870.1| Hypothetical Protein RTG_02115 [Rhodotorula glutinis ATCC 204091]
Length = 966
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 171/362 (47%), Gaps = 50/362 (13%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDL--QRSDSFV-----WVETKSQLNELANAL--- 125
+HPY E+ +L RP F N +DSF WV + L ++ +
Sbjct: 237 AHPYASELASL----RPPSSFFNKPQKPAPHPADSFTKTPFEWVGDEKALEKMVAGIRQV 292
Query: 126 SKEFF--FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI--ALHDEISILQPFFADPG 181
+E A+D E H R++ G T LIQ+ST K+DY++D I + + + L FF +P
Sbjct: 293 GEEGMKDLAIDLEHHDFRTWSGMTCLIQLSTRKKDYIIDAIDPGVRENLESLNEFFTNPE 352
Query: 182 VCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQ 241
KV HG+ +D++WLQRDF +Y+V LFDT A VL Q SLA LL+ Y +K Q
Sbjct: 353 WIKVLHGAKSDIVWLQRDFGLYIVGLFDTYHATHVLGYAQHSLASLLDMYTDFEPDKRYQ 412
Query: 242 REDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP---DDKFNFVLEAS 298
DWR RPLP EMLQYA++D HYLL I L L +G + P +D FN + S
Sbjct: 413 LADWRIRPLPKEMLQYARSDTHYLLSIYDHLRLALHAKGAASKETPSPIEDVFNRSIPVS 472
Query: 299 RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ-------------- 344
+ T L + E + S F L G + + S+
Sbjct: 473 --AITFSLPPFDHETGHF------ESGFLVPLARHGQLKAYSTALAVPTLPIKTGWGPGE 524
Query: 345 ---DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT----DVYTTIAQADS 397
+++R + WR+ +AR DES R+VLS Q ++ + A R DV + A
Sbjct: 525 AKLEVLREVTRWREKVAREEDESTRYVLSLQGVLQITETGAAGRIKEGRDVMQVLGGAKG 584
Query: 398 DV 399
V
Sbjct: 585 GV 586
>gi|194743298|ref|XP_001954137.1| GF18126 [Drosophila ananassae]
gi|190627174|gb|EDV42698.1| GF18126 [Drosophila ananassae]
Length = 909
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 176/356 (49%), Gaps = 40/356 (11%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK--------------SSGS-----HPYELEITALLE 88
+PQ FK + +++ +PF KEK SG+ HPYE E+ E
Sbjct: 203 RPQMLFKEPVDNSALNPFVPRLKEKPNSLKPLALLPEYDDSGNIQAYLHPYEFELMKF-E 261
Query: 89 NPRPEFDFSNVDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P + L SD+ + V++ +L + L + A+D E HS R+F+G T
Sbjct: 262 PPVQQLQKQKPILPNLMSDTELMLVDSVEKLKQALEELRQAPQIAIDVEHHSYRTFMGIT 321
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+Q+ST +DY+ DT+ L DE+ IL DP K+ HG+D D+ WLQRD +Y+VN+
Sbjct: 322 CLVQMSTRSKDYIFDTLILRDEMHILNLVLTDPKKLKILHGADLDIEWLQRDLSLYIVNM 381
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT +A + L+ + SLA+LL+ Y + +K LQ DWR RPLP +++ YA+ D H+L+Y
Sbjct: 382 FDTHRAAKALNLARLSLAFLLKHYIDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIY 441
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI-F 326
+ + + +L +Q E N V S VC + Y K P S +
Sbjct: 442 VYERMTNDLLEQQVETGL-----LNNVYMM---STEVCKKRYNK-----PHVGPESHLDL 488
Query: 327 FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
R + + +R + WRD AR+ DES +VL + ++ +A P
Sbjct: 489 VRKTKRNFDNRQLYA-----LRGIFEWRDATARLEDESYGYVLPNHMMLQIAESLP 539
>gi|294654453|ref|XP_456510.2| exosome component 3'-5' exonuclease [Debaryomyces hansenii CBS767]
gi|199428893|emb|CAG84465.2| DEHA2A04334p [Debaryomyces hansenii CBS767]
Length = 776
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 152/285 (53%), Gaps = 43/285 (15%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S +WV++ LNE+ + LS++ A+D E H RS+ G L+QIS+ +D+++DT+ L
Sbjct: 230 SAIWVDSVDVLNEMISLLSEQSEIAIDLEHHDYRSYYGIVCLMQISSRDQDWIIDTLKLR 289
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
D++ L F +P + KVFHG+ D++WLQRD +Y+V+LFDT A + L P+ SLAYL
Sbjct: 290 DDLESLNKVFTNPDIVKVFHGAFMDIIWLQRDLGLYIVSLFDTYHASKKLGFPKFSLAYL 349
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
LET+ T+K Q DWR RPL ML YA++D H+LL I L +L G
Sbjct: 350 LETFANFKTSKKYQLADWRIRPLSPPMLAYARSDTHFLLNIYDQLRNKLIDAGA------ 403
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS--------- 338
++ VL SR+ + YTK FR L+ GG S
Sbjct: 404 -NRLQEVLYESRQVAKRRFE-YTK---------------FRPLSTSGGKVSCPVMANNPK 446
Query: 339 --ISSV---------TQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
SS+ + L+ L WRD +A+ DES+R+++S+Q
Sbjct: 447 EPFSSILLQYNVPYHKKPLIEALYNWRDALAKRDDESVRYIMSNQ 491
>gi|327308500|ref|XP_003238941.1| exosome component 3'-5' exonuclease [Trichophyton rubrum CBS
118892]
gi|326459197|gb|EGD84650.1| exosome complex exonuclease Rrp6 [Trichophyton rubrum CBS 118892]
Length = 867
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 182/365 (49%), Gaps = 47/365 (12%)
Query: 43 LQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLD 102
L+S+P + L + P K N HPYE EI A P ++ + +
Sbjct: 184 LKSKPHALVGLEESLGGSFQDPTKPYN-------HPYEKEIEAST-YPARVYEKAEPTMY 235
Query: 103 LQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLV 161
+DS ++VET ++ + + L + AVD E H + G L+QIST ++D++V
Sbjct: 236 TPVADSKAIFVETLEDVHAMLSQLKQAKEIAVDLEHHDSHVYHGLVCLMQISTREQDWIV 295
Query: 162 DTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
DT+ D++ +L FADP + KV HGS DV+WLQRD +Y+V LFDT A L P
Sbjct: 296 DTLKPWRDQLQVLNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQLP 355
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+KSL +LL Y G +K Q DWR RPL A ML YA++D H+LLYI L +L +
Sbjct: 356 KKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRNQLLES- 414
Query: 281 NENSYCPDDK------------FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
S P++K +VLE RS LQ Y + P AA+
Sbjct: 415 --PSSSPEEKQESGLGGGGREAIEYVLE---RSKECALQRYER-----PTYDAATG---- 460
Query: 329 LLNGQGG-----VSSISSVTQD---LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
G GG +S ++T++ + R L WRD AR DES + VLS +A+ LA +
Sbjct: 461 --RGSGGWHDMLSNSPVALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQE 518
Query: 381 APANR 385
P ++
Sbjct: 519 MPEDK 523
>gi|118379202|ref|XP_001022768.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89304535|gb|EAS02523.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 645
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 219/469 (46%), Gaps = 75/469 (15%)
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVA----TNKFLQREDWR 246
D++WLQRD+ I + N FD A L+K + SL YLL+ YC K LQ +W
Sbjct: 54 DIVWLQRDYDILISNYFDIQTAAIFLNKDESWSLTYLLQKYCDYTLEKKEKKQLQLSEWS 113
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCL 306
RPL E L YA D+H+L+ I L+ E+ ++ + F LE +
Sbjct: 114 DRPLSEEQLNYAALDSHFLIKIRYELLHEMIKRLD---------FQRTLELLYKMQKATS 164
Query: 307 QVYTK----EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHD 362
+ Y K E+ + S I + ++ + + L R+ + +
Sbjct: 165 KKYEKKPFDELFYFQAFEKQSKIQVNSIGAGLKSTTEWKILNIIFLELAELRESYSEQQN 224
Query: 363 ESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDV 422
++ VL++++++ +A Y+T D++
Sbjct: 225 RYIQSVLTEESLLQIA----------YST---------------------------FDEI 247
Query: 423 ERQV--CNNVENLDDILLANLQKCLGPNGSCPLSVFNYVLPAKNNWELKNQSNKF----V 476
+ ++ ++N D + Q L N +S+ N ++ EL K+ +
Sbjct: 248 QYKLKSVYEIQNQDQFTEKHSQDFLNSNKEKIISILN-----RHTIELDKIIEKYELLCI 302
Query: 477 YKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRD 536
+N + + +Q ++ ++ F +K+S K+ Y NC+I + DG+ LC C+ KK++WYL +
Sbjct: 303 PIKNKMHILQQRIERKNKT-FQEKYSMKTVPYENCQILSPDGQQLCNCNSKKIQWYLKKG 361
Query: 537 LAKLVEDNPPAIMLLFEPKGRP----ED----EGNEFYIQSKKNICVSCGEGNHYLRYRI 588
LA LV +NP I L F+P G+ ED E N +Y+ ++N CV CG + ++ +
Sbjct: 362 LAHLVSENPTVIKLNFQPSGKGNFDLEDQKIFENNYYYVTERENKCVVCGSTEKFAKFYV 421
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGI 637
IPS YR HFP+ LKSHRS DI+LLC++CH+ A +K +I ++ +
Sbjct: 422 IPSLYRRHFPDILKSHRSQDILLLCMNCHQRAGTYCDKKIDEICQQYQV 470
>gi|121705450|ref|XP_001270988.1| exosome component 3'-5' exonuclease [Aspergillus clavatus NRRL 1]
gi|119399134|gb|EAW09562.1| exosome complex exonuclease Rrp6, putative [Aspergillus clavatus
NRRL 1]
Length = 778
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 180/368 (48%), Gaps = 34/368 (9%)
Query: 47 PKPQHNFKRVLADNSYSPFK-----------------HANKEKSSGSHPYELEITALLEN 89
PKPQ +F+R+ + SPFK A + +PYE EI A
Sbjct: 151 PKPQLSFQRLPDNTDVSPFKPLLRTKPHAVVSLEESLEATEPAGVYKNPYEFEIRA---A 207
Query: 90 PRPEFDFS---NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
PE ++ V+ S + +V+T + E+ + L A+D E H + S+ G
Sbjct: 208 KYPESTYTVLPPVEYLPFESTTATFVDTLEGVKEMLSELKSAKEIAIDLEHHDMHSYHGL 267
Query: 147 TALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
+L+QIST +D++VDT+ +++ IL FADP + KV HGS D++WLQRD +YVV
Sbjct: 268 VSLMQISTRDKDWVVDTLKPWREDLQILNDVFADPAILKVLHGSSMDIIWLQRDLGLYVV 327
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
+FDT A L+ P++SL +LL+ + +K Q DWR RPLP+ M YA++D HYL
Sbjct: 328 GMFDTYHAACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPLPSGMFDYARSDTHYL 387
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI 325
LYI L EL ENS PD + + S +S LQ Y + + G
Sbjct: 388 LYIYDHLRNELL----ENS-TPD--HSLIDYVSEQSKNEALQRYERPVYDA-GTGQGQGG 439
Query: 326 FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
++ L V S + + + WRD +AR DE ++ V + +A P ++
Sbjct: 440 WYDYLYRTPAVLSKEQFA--VFKAVHQWRDEVAREEDEGVQCVFPKHVLFKIAQSMPLDQ 497
Query: 386 TDVYTTIA 393
++ T++
Sbjct: 498 GTLFRTLS 505
>gi|119195137|ref|XP_001248172.1| exosome component 3'-5' exonuclease [Coccidioides immitis RS]
gi|392862584|gb|EAS36760.2| exosome complex exonuclease Rrp6 [Coccidioides immitis RS]
Length = 766
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 191/406 (47%), Gaps = 60/406 (14%)
Query: 19 ISILFTRQQRRRRKLN------QCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFK----- 66
I L Q R ++LN Q P + S+ PKPQ +FK +++ SPF+
Sbjct: 111 IKKLGPSQDERGQELNKRASRAQFPGAHNFASSKIPKPQLSFKTRPNNHASSPFRPILRQ 170
Query: 67 --HA-------------NKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQR---SDS 108
HA N + HPY EI + P +S+ L + S +
Sbjct: 171 KPHALIPLPPVAEQTSTNGDVEQSEHPYAHEIR---DCHYPASTYSSSTPQLYKPFESTT 227
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALH 167
+V T + + L AVD E H S+ G L+QIST ++D++VDT+
Sbjct: 228 ATFVNTIEGVKVMLEELKSAKEIAVDLEHHDAHSYHGLVCLMQISTREKDWIVDTLLPWR 287
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
+E+ IL FADP + KV HGS DV+WLQRD +Y+V LFDT A L+ P+KSL +L
Sbjct: 288 EELQILNEVFADPRILKVLHGSSMDVIWLQRDLGLYLVGLFDTYHASVALNYPKKSLKFL 347
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
L+ + + K Q DWR RPL M YA++D HYLLYI L EL ++ ++
Sbjct: 348 LDKFVNLEAEKQYQTADWRLRPLLPGMFDYARSDTHYLLYIYDNLRNELIEKSTPDT--- 404
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
N + +S LQ Y + + Y E G GG + S + L+
Sbjct: 405 ----NLIDYVQDKSKEEALQRYERPV--YDAETG---------QGSGGWYDVLSRSPSLL 449
Query: 348 RR--------LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+R + WRD AR DE ++ VLS +A+ A+A+ P+++
Sbjct: 450 KREQLAVFKAVHRWRDQTARTDDEGVQSVLSKRALFAIAHGMPSDQ 495
>gi|302657746|ref|XP_003020587.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
gi|291184437|gb|EFE39969.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
Length = 881
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 179/361 (49%), Gaps = 40/361 (11%)
Query: 43 LQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLD 102
L+S+P + L + P K N HPYE EI A P ++ + +
Sbjct: 187 LKSKPHALVGLEESLGGSIQDPTKPYN-------HPYEKEIEAST-YPARVYEKAEPTMY 238
Query: 103 LQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLV 161
+DS ++VET ++ + + L + AVD E H + G L+QIST ++D++V
Sbjct: 239 TPVADSKAIFVETLEDVHAMLSQLKQAKEIAVDLEHHDSHVYHGLVCLMQISTREQDWIV 298
Query: 162 DTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
DT+ D++ +L FADP + KV HGS DV+WLQRD +Y+V LFDT A L P
Sbjct: 299 DTLKPWRDQLQVLNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASALQLP 358
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI----AKCLVAEL 276
+KSL +LL Y G +K Q DWR RPL A ML YA++D H+LLYI L+ L
Sbjct: 359 KKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRNQLLELL 418
Query: 277 KQQGNENSYCPD----DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
E P + +VLE RS LQ Y + P AA+ G
Sbjct: 419 PSSSEEKESGPGGGGREAIEYVLE---RSKECALQRYER-----PTYDAATG------RG 464
Query: 333 QGG-----VSSISSVTQD---LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
GG +S ++T++ + R L WRD AR DES + VLS +A+ LA + P +
Sbjct: 465 SGGWHDMLSNSPVALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMPED 524
Query: 385 R 385
+
Sbjct: 525 K 525
>gi|398022862|ref|XP_003864593.1| unnamed protein product [Leishmania donovani]
gi|322502828|emb|CBZ37911.1| unnamed protein product [Leishmania donovani]
Length = 743
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 172/347 (49%), Gaps = 28/347 (8%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------SGSHPYELEITALL---ENPRPEFDFS 97
+PQ F + DNS +PF + S +G HP+E I A P +
Sbjct: 166 RPQLLFDTPV-DNSAAPFVPYYYDASGQSHVGVAGQHPFESVIKAFSIPESQMLPRAEVP 224
Query: 98 NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
V LD + +V+T + + L AVD E H S+ GFT L+QIST +E
Sbjct: 225 PVPLD---ACPLTFVDTSVAMQAMIAKLLLASEIAVDLEHHDFYSYQGFTCLMQISTREE 281
Query: 158 DYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
D++VD + L + L P F +P + KV HG+ D+ WLQ+DF +YVVN FDT A + L
Sbjct: 282 DFIVDCLKLRSSMGALAPVFLNPSILKVLHGAREDIRWLQKDFSLYVVNFFDTGVALQTL 341
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
P SLA+ ++ +C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L
Sbjct: 342 HMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPLSAEMVHYARQDTHFLLYVYDRLKALLL 400
Query: 278 QQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS 337
S + ++ S + LQ+Y K P E +++ G+ +S
Sbjct: 401 NSEGRASIG-----SLLVHVYNESKQLSLQIYEKP-SVVPEET------YKIALGR-SLS 447
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ V + + R + WRD AR D+S VL +++++A+K P
Sbjct: 448 GLNKVQEKVARDVFNWRDSAAREVDDSPTAVLHLSSVLSIASKLPTT 494
>gi|146099475|ref|XP_001468653.1| exosome subunit rrp6p homologue, putative [Leishmania infantum
JPCM5]
gi|134073021|emb|CAM71740.1| exosome subunit rrp6p homologue, putative [Leishmania infantum
JPCM5]
Length = 743
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 172/347 (49%), Gaps = 28/347 (8%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------SGSHPYELEITALL---ENPRPEFDFS 97
+PQ F + DNS +PF + S +G HP+E I A P +
Sbjct: 166 RPQLLFDTPV-DNSAAPFVPYYYDASGQSHVGVAGQHPFESLIKAFSIPESQMLPRAEVP 224
Query: 98 NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
V LD + +V+T + + L AVD E H S+ GFT L+QIST +E
Sbjct: 225 PVPLD---ACPLTFVDTSVAMQAMIAKLLLASEIAVDLEHHDFYSYQGFTCLMQISTREE 281
Query: 158 DYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
D++VD + L + L P F +P + KV HG+ D+ WLQ+DF +YVVN FDT A + L
Sbjct: 282 DFIVDCLKLRSSMGALAPVFLNPSILKVLHGAREDIRWLQKDFSLYVVNFFDTGVALQTL 341
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
P SLA+ ++ +C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L
Sbjct: 342 HMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPLSAEMVHYARQDTHFLLYVYDRLKALLL 400
Query: 278 QQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVS 337
S + ++ S + LQ+Y K P E +++ G+ +S
Sbjct: 401 NSEGRASIG-----SLLVHVYNESKQLSLQIYEKP-SVVPEET------YKIALGR-SLS 447
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ V + + R + WRD AR D+S VL +++++A+K P
Sbjct: 448 GLNKVQEKVARDVFNWRDSAAREVDDSPTAVLHLSSVLSIASKLPTT 494
>gi|145252306|ref|XP_001397666.1| exosome component 3'-5' exonuclease [Aspergillus niger CBS 513.88]
gi|134083214|emb|CAK42852.1| unnamed protein product [Aspergillus niger]
gi|350633598|gb|EHA21963.1| hypothetical protein ASPNIDRAFT_49025 [Aspergillus niger ATCC 1015]
Length = 782
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 181/374 (48%), Gaps = 46/374 (12%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSGS-----------------HPYELEITALLEN 89
PKPQ F+R + +PFK K K +PYE EI A +
Sbjct: 149 PKPQLLFERKADNTDTAPFKPLLKTKPHAVVPLKDSLKLSDSAVGYVNPYEKEIRAA-KF 207
Query: 90 PRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTA 148
P + S VD S +V+T + E+ L A+D E H + S+ G +
Sbjct: 208 PTSSYSVSPPVDYQPWESTKATFVDTLEGVKEMLEELKAAKEIAIDLEHHDVHSYQGLVS 267
Query: 149 LIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNL 207
L+QIST +D++VDT+ +E+ +L F DP + KV HGS D++WLQRD +YVV +
Sbjct: 268 LMQISTRDKDWVVDTLKPWREELQVLNEVFTDPNILKVLHGSSMDIIWLQRDLGLYVVGM 327
Query: 208 FDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLY 267
FDT A L+ P++SL +LL+ + +K Q DWR RP+P M YA++D HYLL+
Sbjct: 328 FDTYHAACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLH 387
Query: 268 IAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFF 327
I + EL ENS ++ ++VLE S++ LQVY + P AA+
Sbjct: 388 IYDHIRNELV----ENSLPDNNLIDYVLEQSKKE---ALQVYER-----PVYDAATG--- 432
Query: 328 RLLNGQGGVSSISSVTQDLVRR--------LCAWRDLMARVHDESLRFVLSDQAIIALAN 379
G GG + S +V R + WRD +AR DE ++ V + +A+
Sbjct: 433 ---QGPGGWYDLLSRNSVVVNREQFAVFKAVHQWRDEVAREEDEGVQCVFPKHVLFRVAH 489
Query: 380 KAPANRTDVYTTIA 393
P + ++ T++
Sbjct: 490 TMPLDLGTLFRTLS 503
>gi|358394505|gb|EHK43898.1| hypothetical protein TRIATDRAFT_172602, partial [Trichoderma
atroviride IMI 206040]
Length = 816
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 161/313 (51%), Gaps = 18/313 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSD---SFVWVETKSQLNELANALSKEFFFAV 133
HPYE EI+++ P+ F D L + D S WV+T + + L + AV
Sbjct: 191 HPYETEISSM---QYPDRLFQIQDPILPQPDEATSATWVDTYEGVLAMLEELKEAKEIAV 247
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDND 192
D E H R+++G +L+QIST ++D++VDT+ ++ +L FADP + KVFHG+ D
Sbjct: 248 DLEHHDFRTYIGLVSLLQISTREKDWVVDTLKPWRHKLQVLNEVFADPTIVKVFHGAYMD 307
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +YV LFDT A + L +SLA+LL + +K Q DWR RPL
Sbjct: 308 MVWLQRDLGLYVNGLFDTFFASDALHYSSRSLAFLLSKFVNFDADKRYQLADWRIRPLSE 367
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK- 311
EM+ YA++D HYLLYI + EL Q + + + VLE RS + L +
Sbjct: 368 EMMFYARSDTHYLLYIYDKIRNELVQSSDSDKHL----VKRVLE---RSRELSLSRHENP 420
Query: 312 EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSD 371
E + GE + F L N Q G S + R L WRDL AR DE+ FVL +
Sbjct: 421 ECNAETGEGSRGWFNFVLKNSQLGYKSEQFA---IFRALWNWRDLTARKEDENPNFVLGN 477
Query: 372 QAIIALANKAPAN 384
+ + P +
Sbjct: 478 NNLTEIVRVNPPD 490
>gi|340518928|gb|EGR49168.1| predicted protein [Trichoderma reesei QM6a]
Length = 818
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 160/311 (51%), Gaps = 11/311 (3%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI ++ R + + S WV+T + E+ L + AVD E
Sbjct: 191 HPYEPEILSMQYPDRVFQVLDPIPPQPVETTSATWVDTYEGVLEMLQELKQAKEIAVDLE 250
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H R+++G +L+QIST ++D++VDT+ ++ +L FADP + KVFHG+ D++W
Sbjct: 251 HHDFRTYIGLVSLLQISTREKDWIVDTLKPWRHKLQVLNEVFADPTIVKVFHGAYMDMVW 310
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YV LFDT A + L +SLA+LL + +K Q DWR RP+P EML
Sbjct: 311 LQRDLGLYVNGLFDTFFASDALHYSSRSLAFLLSKFVNFDADKRYQLADWRIRPIPEEML 370
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD-DKFNFVLEASRRSNTVCLQVYT-KEI 313
YA++D H+LLYI + +L Q + ++ PD D VLE SR + L + E
Sbjct: 371 FYARSDTHFLLYIYDKIRNDLVQVSDRSN--PDKDLIGRVLEKSRE---LSLSRHEHPEF 425
Query: 314 ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQA 373
GE + F L N G S + R L WRD+ AR DE+ FVL
Sbjct: 426 NEETGEGSRGWYNFVLKNSHLGYKSEQFA---VFRALWKWRDVTARTEDENPNFVLGTNN 482
Query: 374 IIALANKAPAN 384
++ +A P +
Sbjct: 483 LVDIARANPPD 493
>gi|406699611|gb|EKD02812.1| hypothetical protein A1Q2_02887 [Trichosporon asahii var. asahii
CBS 8904]
Length = 906
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRS---DSFVWVETKSQLNELANALSKEFFFAV 133
HPY E L P P F++ +S F +++T QL L L K AV
Sbjct: 284 HPYYYETRHL---PYPTSMFTSSTPIRPKSFEDTPFEFIDTPEQLAALTETLKKAKEIAV 340
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS--ILQPFFADPGVCKVFHGSDN 191
D E H+ RS+ GFT L+QIST + D+++DT+AL E+ L FADP V KVFHG+D+
Sbjct: 341 DLEHHNQRSYYGFTCLMQISTREGDWIIDTLALRAELREHKLGHVFADPSVVKVFHGADS 400
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D++WLQ DF IY+VNLFDT A +VL P+ SLA LL+ YC +K Q DWR RP+P
Sbjct: 401 DIVWLQEDFDIYIVNLFDTYHATKVLEFPKFSLASLLQLYCDFEPDKRYQMADWRIRPIP 460
Query: 252 AEMLQYAQTDAHYLLYI 268
EM++YA++D H+LL+I
Sbjct: 461 DEMMKYARSDTHFLLFI 477
>gi|401887667|gb|EJT51646.1| hypothetical protein A1Q1_07058 [Trichosporon asahii var. asahii
CBS 2479]
Length = 906
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRS---DSFVWVETKSQLNELANALSKEFFFAV 133
HPY E L P P F++ +S F +++T QL L L K AV
Sbjct: 284 HPYYYETRHL---PYPTSMFTSSTPIRPKSFEDTPFEFIDTPEQLAALTETLKKAKEIAV 340
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS--ILQPFFADPGVCKVFHGSDN 191
D E H+ RS+ GFT L+QIST + D+++DT+AL E+ L FADP V KVFHG+D+
Sbjct: 341 DLEHHNQRSYYGFTCLMQISTREGDWIIDTLALRAELREHKLGHVFADPSVVKVFHGADS 400
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D++WLQ DF IY+VNLFDT A +VL P+ SLA LL+ YC +K Q DWR RP+P
Sbjct: 401 DIVWLQEDFDIYIVNLFDTYHATKVLEFPKFSLASLLQLYCDFEPDKRYQMADWRIRPIP 460
Query: 252 AEMLQYAQTDAHYLLYI 268
EM++YA++D H+LL+I
Sbjct: 461 DEMMKYARSDTHFLLFI 477
>gi|296815198|ref|XP_002847936.1| exosome component 3'-5' exonuclease [Arthroderma otae CBS 113480]
gi|238840961|gb|EEQ30623.1| ribosomal RNA processing 3'-5' exonuclease [Arthroderma otae CBS
113480]
Length = 810
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 162/325 (49%), Gaps = 43/325 (13%)
Query: 77 HPYELEI------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFF 130
HPYE EI ++ E P+ + V+ + +VET ++ + L K
Sbjct: 214 HPYEKEIGESTYPASVYEKREPQM-YQPVE-----NTKATFVETMEDVHAMLAELKKAKE 267
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGS 189
AVD E H + G L+QIST ++D++VDT+ D++ +L FADP + KV HGS
Sbjct: 268 IAVDLEHHDAHVYHGLVCLMQISTREQDWIVDTLKPWRDQLQVLNEVFADPSIVKVLHGS 327
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
DV+WLQRD +Y+V LFDT A +L P+KSL +LL+ Y G +K Q DWR RP
Sbjct: 328 SMDVIWLQRDLGLYLVGLFDTFHAASMLQLPKKSLKFLLQQYVGFDADKQYQTADWRIRP 387
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
L ML YA++D H+LLYI L EL + D +VLE RS LQ Y
Sbjct: 388 LLPGMLDYARSDTHFLLYIFDRLRNELIEASGR------DAIEYVLE---RSKECALQRY 438
Query: 310 TKEI-ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR--------LCAWRDLMARV 360
+ +S G G GG + S + L+ R L WRD AR
Sbjct: 439 ERPTYDSLRG------------RGNGGWHDMLSNSPVLLTREQFAVFRALHEWRDKTART 486
Query: 361 HDESLRFVLSDQAIIALANKAPANR 385
DES + VLS +++ +A + P ++
Sbjct: 487 DDESTQTVLSKRSLFRIAQEMPVDK 511
>gi|452837795|gb|EME39736.1| hypothetical protein DOTSEDRAFT_138360 [Dothistroma septosporum
NZE10]
Length = 784
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 181/360 (50%), Gaps = 29/360 (8%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HAN------------KEKSSGSHPYELEITALLE 88
KPQ F+ V ++ PFK HA + S HPY+LE+
Sbjct: 141 KPQLKFEHVPRNDEVLPFKPLLQSKPHAAVPLETSPVASDVDTQPSYPHPYQLEVEQY-R 199
Query: 89 NPRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P + S + S + +V+T+ L E+ L A+D E H R+++G
Sbjct: 200 YPSSVYTISEPIMYQPFESTTATFVDTEDALYEMLEELKLAKEIAIDLEHHDSRTYIGIV 259
Query: 148 ALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
+L+QIST +D++VDT+ ++ L F DP + KV HG+ D++WLQRD +Y+V
Sbjct: 260 SLMQISTRDKDWVVDTLQPWRRKMQCLNEVFVDPSIVKVLHGAYMDIVWLQRDLGLYIVG 319
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A L SLA+LL+ + K Q DWR RPLP E+ YA++D H+LL
Sbjct: 320 LFDTHYAARALGYTGGSLAFLLKKFIDFDAQKQYQMADWRIRPLPQELFDYARSDTHFLL 379
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI-ESYPGEAAASSI 325
YI + EL Q+ + + PD + + V + ++SN V LQ Y I ++ G+ A
Sbjct: 380 YIFDNMRNELVQRSDFSK--PDHEGDKVWDVLQKSNEVALQKYEHPIYDAELGQGAGG-- 435
Query: 326 FFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
++++L + S + + R + WRD +AR D+S +V+ + ++++A P NR
Sbjct: 436 WYKMLARTPALFSKEQFS--VFRAVHKWRDDVAREQDDSTHYVMPNHQVLSIAKAMPPNR 493
>gi|116203503|ref|XP_001227562.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
gi|88175763|gb|EAQ83231.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
Length = 827
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 179/368 (48%), Gaps = 32/368 (8%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEIT-ALLENPRPEFD--FSNVDLDLQ 104
KPQ+ F++ + + P+K K P + +T ++ + RP+++ + +D+Q
Sbjct: 146 KPQNTFEKKIDNFESGPWKPLLTSKPHAQTPLDASLTISVNDEGRPQYEHPYKQEIIDMQ 205
Query: 105 RSD-----------------SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
D + +WV+T + E+ L K A+D E H RS+ G
Sbjct: 206 YPDHVFKSREPIGYPPLEKTTAIWVDTYEGVLEMLEELKKAPEIAIDLEHHDFRSYTGLL 265
Query: 148 ALIQISTEKEDYLVDT-IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
+L+QIST ++D+++DT + ++ +L FADP + KV HG+ D++WLQRD +YVV
Sbjct: 266 SLMQISTREKDWIIDTLVPWRHKLEVLNEVFADPKIVKVLHGAFMDIIWLQRDLGLYVVG 325
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A L KSLA+LL+ + +K Q DWR RPLP EM YA++D H+LL
Sbjct: 326 LFDTFYASTALQYAGKSLAFLLKKFVDFDADKKYQLADWRLRPLPEEMFYYARSDTHFLL 385
Query: 267 YIAKCLVAELKQQGNENSY--CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASS 324
YI L EL Q +N P D+ ++S V LQ Y P A +
Sbjct: 386 YIYDMLRNELAQLATQNGSDGHPTDRV------IQKSKEVALQRYENSF-CDPETGAGNR 438
Query: 325 IFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ L + + + + WRD +AR DES F+++ Q + +A P +
Sbjct: 439 GWHATLTKSSTLYDSEQFA--VYKAVHKWRDDIARQEDESPFFIMTQQVLSNIARIMPTD 496
Query: 385 RTDVYTTI 392
+++ +
Sbjct: 497 MKALWSLL 504
>gi|295659299|ref|XP_002790208.1| exosome component 3'-5' exonuclease [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281913|gb|EEH37479.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 827
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 191/394 (48%), Gaps = 49/394 (12%)
Query: 77 HPYELEITALLENPRPEFDFS---NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAV 133
HPYE EI +P P+ +S V+ + + +V+T ++ + L + A+
Sbjct: 196 HPYETEIR---NSPYPQSIYSISPPVEYKSFDATTATFVDTLEGVHSMLAELKEATEIAI 252
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDND 192
D E H + S+ G L+QIST ++D++VDT+ +E+ +L F DP + KV HGS D
Sbjct: 253 DLEHHDVHSYHGLVCLMQISTREQDWIVDTLKPWREELQVLNEVFTDPKILKVLHGSTMD 312
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +Y+V LFDT L+ P++SL +LLE + K Q DWR RPL
Sbjct: 313 IIWLQRDLGLYIVGLFDTYHGSVALNYPKRSLKFLLEKFVNFKAEKKYQMADWRLRPLLP 372
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE 312
M YA++D HYLLYI + L ENS + ++VLE SR+ LQ Y +
Sbjct: 373 GMFDYARSDTHYLLYIYDHIRNSLV----ENSTPAHNLVDYVLEKSRQE---ALQRYERP 425
Query: 313 I---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMARVHDESLRFV 368
+ E+ G + R S++ S Q V + + WRD +AR DE ++++
Sbjct: 426 VYNAETGEGGGGWHDMLIR-------NSTLFSREQFAVFKAVHQWRDKLARSEDEGVQYI 478
Query: 369 LSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCN 428
LS Q++ +A+ P + + TI+ SP V + + ++ QV
Sbjct: 479 LSKQSLFKIAHAMPLDPASLLRTISPV----------------SPPVRARMSEL-VQVIK 521
Query: 429 NVE-------NLDDILLANLQKCLGPNGSCPLSV 455
+ L D+L Q+ G + PLS+
Sbjct: 522 EAKLAGATGPELRDVLFPYKQRTDGSKPTTPLSL 555
>gi|401428763|ref|XP_003878864.1| putative exosome subunit rrp6p homologue [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495113|emb|CBZ30417.1| putative exosome subunit rrp6p homologue [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 743
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 179/363 (49%), Gaps = 30/363 (8%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKS-------SGSHPYELEITALLENPR----PEFDF 96
+PQ F + DNS +PF + S +G HP+E + P P +
Sbjct: 166 RPQLLFGTPV-DNSAAPFVPRYYDASGQYHVGVAGQHPFE-SVIKTFSVPESQMLPRAEV 223
Query: 97 SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK 156
V LD + +V+T + + + L AVD E H S+ GFT L+QIST +
Sbjct: 224 PPVPLD---ACPLTFVDTTAAMQAMVAKLLLSSEIAVDLEHHDFYSYQGFTCLMQISTRE 280
Query: 157 EDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
ED++VD + L + L P F +P + KVFHG+ D+ WLQ+DF +YVVN FDT A +
Sbjct: 281 EDFIVDCLKLRSSMGALAPVFLNPSILKVFHGAREDIRWLQKDFSLYVVNFFDTGVALQT 340
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L P SLA+ ++ +C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L
Sbjct: 341 LHMPY-SLAFAVDHFCQVKLNKKYQTADWRVRPLSAEMVHYARQDTHFLLYVHDRLKALL 399
Query: 277 KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV 336
S + ++ S + LQ+Y K P E +++ G+ +
Sbjct: 400 LNSEGRASIG-----SLLVHVYNESKQLSLQIYEKP-NVVPEET------YKIALGR-SL 446
Query: 337 SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
S ++ V + + + WRD AR D+S VL +++++A+K P ++ A A
Sbjct: 447 SGLNKVQEKVACDVFNWRDSAAREVDDSPMAVLHLSSVLSIASKLPTTAKELLRCCAPAT 506
Query: 397 SDV 399
+ V
Sbjct: 507 AVV 509
>gi|303310683|ref|XP_003065353.1| exosome component 3'-5' exonuclease [Coccidioides posadasii C735
delta SOWgp]
gi|240105015|gb|EER23208.1| 3'-5' exonuclease family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 766
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 190/406 (46%), Gaps = 60/406 (14%)
Query: 19 ISILFTRQQRRRRKLN------QCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFK----- 66
I L Q R ++LN Q P + S+ PKPQ +FK +++ SPF+
Sbjct: 111 IKKLGPSQDERGQELNKRASKAQFPGAYNFASSKIPKPQLSFKTRPNNHASSPFRPILRQ 170
Query: 67 --HA-------------NKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQR---SDS 108
HA N + HPY EI + P +S+ L + S +
Sbjct: 171 KPHALIPLPPVAEQTSTNGDVEQSEHPYAHEIK---DCHYPASTYSSSTPQLYKPFESTT 227
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALH 167
+V T + + L AVD E H S+ G L+QIST ++D++VDT+
Sbjct: 228 ATFVNTIEGVKVMLEELKSAKEIAVDLEHHDAHSYHGLVCLMQISTREKDWIVDTLLPWR 287
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
+E+ IL FADP + KV HGS DV+WLQRD +Y+V LFDT A L+ P+KSL +L
Sbjct: 288 EELQILNEVFADPRILKVLHGSSMDVIWLQRDLGLYLVGLFDTYHASVALNYPKKSLKFL 347
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
L+ + + K Q DWR RPL M YA++D HYLLYI L EL ++ ++
Sbjct: 348 LDKFVNLEAEKQYQTADWRLRPLLPGMFDYARSDTHYLLYIYDNLRNELIEKSTPDT--- 404
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
N + +S LQ Y + + Y E G GG + S + L+
Sbjct: 405 ----NLIDYVQDKSKEEALQRYERPV--YDAETG---------QGSGGWYDVLSRSPSLL 449
Query: 348 RR--------LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
R + WRD AR DE ++ VLS +A+ A+A+ P+++
Sbjct: 450 NREQLAVFKAVHRWRDQTARTDDEGVQSVLSKRALFAIAHGMPSDQ 495
>gi|320034794|gb|EFW16737.1| exosome complex exonuclease Rrp6 [Coccidioides posadasii str.
Silveira]
Length = 772
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 190/406 (46%), Gaps = 60/406 (14%)
Query: 19 ISILFTRQQRRRRKLN------QCPQYSCYLQSE-PKPQHNFKRVLADNSYSPFK----- 66
I L Q R ++LN Q P + S+ PKPQ +FK +++ SPF+
Sbjct: 111 IKKLGPSQDERGQELNKRASKAQFPGAYNFASSKIPKPQLSFKTRPNNHASSPFRPILRQ 170
Query: 67 --HA-------------NKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQR---SDS 108
HA N + HPY EI + P +S+ L + S +
Sbjct: 171 KPHALIPLPPVAEQTSTNGDVEQSEHPYAHEIK---DCHYPASTYSSSTPQLYKPFESTT 227
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALH 167
+V T + + L AVD E H S+ G L+QIST ++D++VDT+
Sbjct: 228 ATFVNTIEGVKVMLEELKSAKEIAVDLEHHDAHSYHGLVCLMQISTREKDWIVDTLLPWR 287
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
+E+ IL FADP + KV HGS DV+WLQRD +Y+V LFDT A L+ P+KSL +L
Sbjct: 288 EELQILNEVFADPRILKVLHGSSMDVIWLQRDLGLYLVGLFDTYHASVALNYPKKSLKFL 347
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
L+ + + K Q DWR RPL M YA++D HYLLYI L EL ++ ++
Sbjct: 348 LDKFVNLEAEKQYQTADWRLRPLLPGMFDYARSDTHYLLYIYDNLRNELIEKSTPDT--- 404
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
N + +S LQ Y + + Y E G GG + S + L+
Sbjct: 405 ----NLIDYVQDKSKEEALQRYERPV--YDAETG---------QGSGGWYDVLSRSPSLL 449
Query: 348 RR--------LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
R + WRD AR DE ++ VLS +A+ A+A+ P+++
Sbjct: 450 NREQLAVFKAVHRWRDQTARTDDEGVQSVLSKRALFAIAHGMPSDQ 495
>gi|307102324|gb|EFN50630.1| hypothetical protein CHLNCDRAFT_59476 [Chlorella variabilis]
Length = 680
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
SF WV+T +L A L ++ A+D E HS ++ G T L+Q+ST +DYL+D++AL
Sbjct: 115 SFTWVDTVPKLAAAAMELYEQDRTALDVEHHSTHTYSGLTCLVQLSTGSKDYLIDSLALR 174
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
++ +L P ++P +CKV HG ND +WLQRDF +++VN+FDT KAC+VL Q+SL L
Sbjct: 175 QDMHLLAPVLSNPRICKVIHGGGNDAVWLQRDFGLFLVNVFDTEKACQVLGYHQRSLGAL 234
Query: 228 LETYCGVATNKFL-QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L+ +CG+ +K L QR DWR+RPL AE++ YA+ D +LL IA L EL
Sbjct: 235 LQRFCGIQADKSLGQRADWRRRPLSAELIDYARRDVQHLLTIADRLGHEL 284
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 74/158 (46%), Gaps = 36/158 (22%)
Query: 467 ELKNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDR 526
+L + + V+ KV VA K Q+F+ K VY NC +Y DG LLC+ DR
Sbjct: 392 QLLQEGGRTVHGSKASKVHDPVAFKQR---LAQRFAAKGVVYENCCMYDQDGELLCHTDR 448
Query: 527 KKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRY 586
KKLEWY+ + LA K N CVSCGE HYLRY
Sbjct: 449 KKLEWYIRKGLAV-----------------------------KKANKCVSCGEEGHYLRY 479
Query: 587 RIIPSCYRIHFPEQLKSHRSHDI----VLLCVDCHEVA 620
R++P+CYR P +LKSHR + L DC E +
Sbjct: 480 RVVPTCYRRAMPTRLKSHRRQLVSQIRTFLGTDCAEAS 517
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 836 DDECENSSVQ-NGFGSSSPTPNSKVSLL---GHGPHGKQVVDYLLREYGEDGIRQFCQRW 891
DDE E + NG P P +S L GH HG+QVV++L + G++ + C R+
Sbjct: 581 DDEAEVHGAEVNGGAMPQPPPGLGLSDLRNTGHLWHGQQVVEHLTSQGGDEALLGLCHRF 640
Query: 892 RQVFVEALHPHFLPAGW 908
RQ FV+ L P FLP GW
Sbjct: 641 RQCFVDTLQPQFLPPGW 657
>gi|296419821|ref|XP_002839490.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635651|emb|CAZ83681.1| unnamed protein product [Tuber melanosporum]
Length = 838
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 47/341 (13%)
Query: 76 SHPYELEITAL--------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSK 127
+HPY+ EI ++ P P D+ + WV+T L E+ + +
Sbjct: 204 AHPYQAEIESMEYPKEVYSWMEPIPSRDWDEIPP--------TWVDTPRALQEMIKDMRR 255
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
AVD E H R+++G T L+Q+ST +DY+VDT+ L ++ L F +P V KV H
Sbjct: 256 CTEIAVDLEHHDTRTYIGLTCLMQLSTRDDDYIVDTLKLRGQLEPLNEIFTNPRVIKVLH 315
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D++WLQRD +Y+V LFDT A + L + LA++L+ Y +K Q DWR
Sbjct: 316 GAFMDIIWLQRDLGLYIVGLFDTFYAAQALEFARFGLAHILKKYVNFDADKQYQMADWRL 375
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP EML YA++D HYLLY C+ L ++ + V ++S L+
Sbjct: 376 RPLPKEMLDYARSDTHYLLYCFDCMRNSLVEKSRGD----------VEHVLQKSKETALR 425
Query: 308 VYTKEI-ESYPGEA----AASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMARVH 361
Y ++ ++ GE A+ I F+ + TQ+ V + + AWRD AR
Sbjct: 426 RYIRDTYDAATGEGTFGWASQIIKFKF-----------NRTQEFVFKAVHAWRDQAAREE 474
Query: 362 DESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCL 402
DES FV S + AL+ P + Y +A+ D + L
Sbjct: 475 DESPTFVCSRSTLGALSTAMPTD----YDGVAKCIHDTNHL 511
>gi|449310638|gb|AGE92546.1| exosome subunit RRP6p-like protein [Leishmania braziliensis]
Length = 735
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 172/336 (51%), Gaps = 27/336 (8%)
Query: 59 DNSYSPFKHANKEKS-------SGSHPYELEITALL---ENPRPEFDFSNVDLDLQRSDS 108
DNS +PF + S +G HP+E I A + P + + LD +
Sbjct: 176 DNSVAPFVPHYCDASGQYHLGVAGQHPFEGVIRAFVIPESQLLPREEVPPMPLD---TCP 232
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+V+T + + + L AVD E H S+ G T L+QIST +ED++VD + L
Sbjct: 233 LSFVDTPAAMQAMVAKLLLSSEIAVDLEHHDFYSYQGITCLMQISTREEDFIVDCLQLRS 292
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+ L P F +P + KV HG+ D+ WLQ+DF +Y+VN FDT A + L P SLA+ +
Sbjct: 293 LMGTLAPVFLNPLILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHMPY-SLAFAV 351
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ +C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L NS
Sbjct: 352 DHFCQVKLNKKFQTADWRVRPLSAEMVHYARQDTHFLLYVYDRLKALLL-----NSEGRA 406
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
N ++ + S + LQ+Y K + P E +++ G+ +S ++ V + + R
Sbjct: 407 IVGNLLVHVYKESKQLSLQLYEKP-QVVPEET------YKIALGR-SLSGLNKVQEKVAR 458
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ WRD AR D+S VL +++A+A+K PA
Sbjct: 459 DVFNWRDSAAREVDDSPTAVLHLSSVLAIASKLPAT 494
>gi|315054289|ref|XP_003176519.1| exosome component 3'-5' exonuclease [Arthroderma gypseum CBS
118893]
gi|311338365|gb|EFQ97567.1| exosome complex exonuclease RRP6 [Arthroderma gypseum CBS 118893]
Length = 827
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 176/358 (49%), Gaps = 39/358 (10%)
Query: 43 LQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLD 102
L+S+P + L + P K N HPYE EI A + PE + +
Sbjct: 192 LKSKPHALVGLEESLGGSEQDPTKPYN-------HPYEKEIEASV---YPESVYQKAEPT 241
Query: 103 LQR---SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
+ + +VET + + L + AVD E H + G L+QIST ++D+
Sbjct: 242 MYQPVEGTKATFVETLEDVQRMLAQLKQAKEIAVDLEHHDGHVYHGLVCLMQISTREQDW 301
Query: 160 LVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS 218
+VDT+ D++ IL FADP + KV HGS DV+WLQRD +Y+V LFDT A VL
Sbjct: 302 IVDTLKPWRDQLQILNEVFADPSIVKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASVLQ 361
Query: 219 KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
P+KSL +LL Y G +K Q DWR RPL ML YA++D H+LLYI L EL
Sbjct: 362 LPKKSLKFLLHEYVGFDADKKYQTADWRIRPLLTGMLDYARSDTHFLLYIFDRLRNELLA 421
Query: 279 QGNENSYC---PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGG 335
++ S + VLE S+ S LQ Y + P AA G GG
Sbjct: 422 LDSDLSSAGVGGREAIECVLERSKES---ALQRYER-----PTYDAARG------RGSGG 467
Query: 336 -----VSSISSVTQD---LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+S ++T++ + R L WRD +AR DES + VLS +++ +A + P ++
Sbjct: 468 WHDMLSTSPVALTREQFAVFRALHEWRDKVARTDDESTQTVLSKRSLFRIAQEMPEDK 525
>gi|167392672|ref|XP_001740248.1| exosome complex exonuclease RRP6 [Entamoeba dispar SAW760]
gi|165895708|gb|EDR23337.1| exosome complex exonuclease RRP6, putative [Entamoeba dispar
SAW760]
Length = 517
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 168/352 (47%), Gaps = 47/352 (13%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HANKEKSSGSHPYELEITALLE--------NPRP 92
KPQ NF DN +K H+ + HPY EI L + P+P
Sbjct: 120 KPQLNFTDK-PDNFSVEYKPKCIKKYHSKYPVDTQPHPYINEIHELKQMGWQLEKCTPQP 178
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
F L V+V T L E+ +L+ FAVD E HS S+ GF L+QI
Sbjct: 179 PLSFEKTPL--------VYVNTLELLQEMIISLNHVNQFAVDVEHHSEHSYYGFVCLLQI 230
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
ST DY++DTI L D I++L F +P + KVFHG D D++WL +F +YVVN D+ +
Sbjct: 231 STRSSDYIIDTITLRDSITLLNDPFTNPNIEKVFHGCDFDMIWLSYNFGLYVVNCIDSGQ 290
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
L SL YLL+ YC V +K Q DWR RPL EM++YA+ D HYLLYI
Sbjct: 291 CARALKLQHFSLKYLLQKYCNVDADKKYQLADWRLRPLTKEMIEYARGDTHYLLYI---- 346
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
+ Q NE C D + E +SN +CL+++ + + + R+
Sbjct: 347 ---IDQLRNE---CID--VGILEEVLNKSNELCLRLFRPTV-------CSDDVIERV--- 388
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
S I D ++L RD +AR+ DES +++ + + N+ P +
Sbjct: 389 -ARRSWIKKTQFDTFKKLYLLRDKIARIEDESPESIINMTMLSNIVNELPTD 439
>gi|451855365|gb|EMD68657.1| hypothetical protein COCSADRAFT_157073 [Cochliobolus sativus
ND90Pr]
Length = 791
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 184/370 (49%), Gaps = 34/370 (9%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HAN-------------KEKSSGSHPYELEITAL 86
PKPQ F+ V ++ F+ HA + + HPY+ EI
Sbjct: 133 PKPQLQFEHVPTNDETGGFRPLATSKPHAKIPLEECLKTFRDKRGREQYPHPYQTEIEEY 192
Query: 87 LENPRPEFDFSNVD-LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLG 145
E P ++++ S + V+T L + + L AVD E H RS++G
Sbjct: 193 -EYPANVYEYAEPQQYKPFESTTATLVDTPEALATMLSELKTAKEIAVDLEHHDNRSYIG 251
Query: 146 FTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV 204
+L+QIST +D++VDT+ ++ L FADP + KV HG+ D+MWLQRD +Y+
Sbjct: 252 MVSLMQISTRDKDWIVDTLKPWRRKLECLNEVFADPSILKVLHGAYMDIMWLQRDLGLYI 311
Query: 205 VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
V LFDT A L P SLAYLLE + K Q DWR RPL E+ +YA+ D H+
Sbjct: 312 VGLFDTYHAARALGYPGASLAYLLERHVKFTAQKQYQLADWRIRPLSPELFEYARADTHF 371
Query: 265 LLYIAKCLVAELKQQGNENSYCPD-DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA-A 322
LLYI + EL ++ + ++ PD +K + VLE S+ ++ LQ Y I Y E
Sbjct: 372 LLYIYDNMRNELVEKSDFSN--PDKNKVHDVLEKSKETS---LQRYEHPI--YDSETGLG 424
Query: 323 SSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
SS +++L++ + + R + WRD + R DES F++ + A+ ++A P
Sbjct: 425 SSGWYKLISRTPVQFTPEQFA--VFRAVHRWRDDLGRKEDESPLFIMPNHAVFSVARAMP 482
Query: 383 ANRTDVYTTI 392
A++ ++ I
Sbjct: 483 ADKAALFNAI 492
>gi|145548742|ref|XP_001460051.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427879|emb|CAK92654.1| unnamed protein product [Paramecium tetraurelia]
Length = 676
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 143/258 (55%), Gaps = 17/258 (6%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGS 189
AVD E + S+LG T LIQ+ST +DY++D L ++ +L FA+P + KVFHG+
Sbjct: 220 IAVDLEHNHQISYLGITCLIQLSTRSQDYIIDPFPLWKQLGDMLSVIFANPKIVKVFHGA 279
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
+NDV WLQRDF +Y+VNLFDT A + L Q S +LL YC +T+K Q DW QRP
Sbjct: 280 ENDVQWLQRDFGLYIVNLFDTFHASKELQLMQNSFQFLLSEYCKKSTDKTYQTADWTQRP 339
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN---SYCPDDKFNFVLEAS-RRSNTVC 305
LP EM++YAQ D HYLLYI + +LK+ N S P N+ LEA +RS
Sbjct: 340 LPDEMIKYAQIDTHYLLYIYDRMRQDLKKLNKPNDNISNIP----NYYLEAVLKRSKETA 395
Query: 306 LQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
L++Y K ++ + + +I LN Q S +L+ RL R+ + HD++
Sbjct: 396 LKIYKKPLQD--QDQSLQTI----LNKQDRRMEAKSF--ELMVRLLELREELGIKHDQNP 447
Query: 366 RFVLSDQAIIALANKAPA 383
R+ L + + + P
Sbjct: 448 RYFLPNPFLFKIVESKPT 465
>gi|440292006|gb|ELP85248.1| exosome complex exonuclease RRP6, putative [Entamoeba invadens IP1]
Length = 517
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 67 HANKEKSSGSHPYELEITALLE--------NPRPEFDFSNVDLDLQRSDSFVWVETKSQL 118
H++ ++ HPY EI L NP+ F N L ++V+ +L
Sbjct: 144 HSDYPVNTVPHPYINEIRNLQLSEWQKVPCNPQAPLSFENTPL--------LFVQNMDEL 195
Query: 119 NELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFA 178
N L L+ FAVD E HS S+ GF L+QIST ED++VD I L D I +L F
Sbjct: 196 NRLIKTLNNVDQFAVDVEHHSEHSYNGFACLMQISTRSEDFVVDVITLRDSIHLLNEPFT 255
Query: 179 DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 238
+P + KVFHG D D++WL +F +YVVN FD+ +A L SL +LLE Y GV +K
Sbjct: 256 NPKIEKVFHGCDFDMVWLSYNFGLYVVNNFDSGQAARCLKLQHFSLKFLLEKYVGVEADK 315
Query: 239 FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEAS 298
Q DWR RPL EM+ YA+ D HYLLYI + E +Q N + E
Sbjct: 316 KYQLADWRIRPLTQEMINYARGDTHYLLYICDLMRNECLEQ------------NVLYEVQ 363
Query: 299 RRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMA 358
+SN +CL+++ I +AA I S I ++L RD +A
Sbjct: 364 AKSNELCLRLFKPTIY---NDAAVERI--------AKKSWIKKSQFKAFKKLFLLRDKIA 412
Query: 359 RVHDESLRFVLSDQAIIALANKAPAN 384
R DES ++S + ++ ++ P +
Sbjct: 413 REEDESPHSIMSQSVLNSILSEVPTD 438
>gi|452004410|gb|EMD96866.1| hypothetical protein COCHEDRAFT_1085740 [Cochliobolus
heterostrophus C5]
Length = 792
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 178/369 (48%), Gaps = 32/369 (8%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HAN-------------KEKSSGSHPYELEITAL 86
PKPQ F+ V ++ F+ HA + + HPY+ EI
Sbjct: 133 PKPQLQFEHVPTNDETGGFRPLVTSKPHAKIPLEECLKTFRDKRGREQYPHPYQTEIEEY 192
Query: 87 LENPRPEFDFSNVD-LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLG 145
E P ++++ S + V+T L + + L AVD E H RS++G
Sbjct: 193 -EYPPSVYEYAEPQQYKPFESTTATLVDTPEALATMLSELKTAKEIAVDLEHHDNRSYIG 251
Query: 146 FTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV 204
+L+QIST +D++VDT+ ++ L FADP + KV HG+ D+MWLQRD +Y+
Sbjct: 252 MVSLMQISTRDKDWIVDTLKPWRRKLECLNEVFADPSILKVLHGAYMDIMWLQRDLGLYI 311
Query: 205 VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
V LFDT A L P SLAYLLE + K Q DWR RPL E+ +YA+ D H+
Sbjct: 312 VGLFDTYHAARALGYPGASLAYLLERHVKFTAQKQYQLADWRIRPLSPELFEYARADTHF 371
Query: 265 LLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA-AS 323
LLYI + EL ++ + + DK N V + +S LQ Y I Y E S
Sbjct: 372 LLYIYDNMRNELIEKSD---FSDPDK-NKVQDVLEKSKETSLQRYEHPI--YDSETGLGS 425
Query: 324 SIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
S +++L++ + + R + WRD + R DES F++ + A+ ++A PA
Sbjct: 426 SGWYKLISRTPVQFTPEQFA--VFRAVHRWRDDLGRKEDESPLFIMPNHAVFSVARAMPA 483
Query: 384 NRTDVYTTI 392
++ ++ I
Sbjct: 484 DKAALFNAI 492
>gi|154336623|ref|XP_001564547.1| putative exosome subunit rrp6p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061582|emb|CAM38612.1| putative exosome subunit rrp6p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 735
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 171/336 (50%), Gaps = 27/336 (8%)
Query: 59 DNSYSPFKHANKEKS-------SGSHPYELEITALL---ENPRPEFDFSNVDLDLQRSDS 108
DNS +PF + S +G HP+E I A + P + + LD +
Sbjct: 176 DNSVAPFVPHYCDASGQYHLGVAGQHPFEGVIRAFVIPESQLLPREEVPPMPLD---TCP 232
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+V+T + + + L AVD E H S+ G T L+QIST +ED++VD + L
Sbjct: 233 LSFVDTPAAMQAMVAKLLLSSEIAVDLEHHDFYSYQGITCLMQISTREEDFIVDCLQLRS 292
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+ L P F +P + KV HG+ D+ WLQ+DF +Y+VN FDT A + L P SLA+ +
Sbjct: 293 LMGTLAPVFLNPLILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHMPY-SLAFAV 351
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ +C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L NS
Sbjct: 352 DHFCQVKLNKKFQTADWRVRPLSAEMVHYARQDTHFLLYVYDRLKALLL-----NSEGRA 406
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
N ++ + S + LQ+Y K P E +++ G+ +S ++ V + + R
Sbjct: 407 IVGNLLVHVYKESKQLSLQLYEKP-HVVPEET------YKIALGR-SLSGLNKVQEKVAR 458
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ WRD AR D+S VL +++A+A+K PA
Sbjct: 459 DVFNWRDSAAREVDDSPTAVLHLSSVLAIASKLPAT 494
>gi|428169598|gb|EKX38530.1| hypothetical protein GUITHDRAFT_59898, partial [Guillardia theta
CCMP2712]
Length = 153
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 98/138 (71%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FAVD E HSLRSF GFT L+QIST ++D++VDTI L I +L P F DP + KVFHG+D
Sbjct: 11 FAVDLEHHSLRSFQGFTCLMQISTREQDFIVDTIELRSCIHLLLPAFTDPKITKVFHGAD 70
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+DV WLQRDF +Y+VN+FDT +A VL P LAYLL +C +K Q DWR RPL
Sbjct: 71 SDVRWLQRDFGLYIVNMFDTGQASRVLEFPSYGLAYLLHRFCEEEADKQYQLADWRVRPL 130
Query: 251 PAEMLQYAQTDAHYLLYI 268
EML+YA+ D HYLLYI
Sbjct: 131 TPEMLKYARMDTHYLLYI 148
>gi|239610958|gb|EEQ87945.1| exosome complex exonuclease Rrp6 [Ajellomyces dermatitidis ER-3]
gi|327351664|gb|EGE80521.1| exosome complex exonuclease Rrp6 [Ajellomyces dermatitidis ATCC
18188]
Length = 814
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 167/334 (50%), Gaps = 35/334 (10%)
Query: 73 SSGSHPYELEI--------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
+S HPYE EI + PR F + +V+T ++ +
Sbjct: 193 TSYKHPYETEIRNSTYPSSAFAISAPRESNPFETT--------TATFVDTLEGVHSMLAE 244
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVC 183
L + A+D E H S+ G L+QIST ++D++VDT+ +E+ IL FADP +
Sbjct: 245 LKQTTEIAIDLEHHDTHSYHGLVCLMQISTREKDWIVDTLKPWREELQILNEVFADPKII 304
Query: 184 KVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE 243
KV HGS DV+WLQRD +Y+V LFDT A L+ P++SL +LLE + K Q
Sbjct: 305 KVLHGSTMDVIWLQRDLGLYLVGLFDTYHAAVALNYPKRSLKFLLEKFVNFQAEKKYQMA 364
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNT 303
DWR RPL M YA++D HYLLYI +++ E+S ++ +VLE RS
Sbjct: 365 DWRLRPLLPGMFDYARSDTHYLLYIYD----QIRNSLVEHSTPDNNLIAYVLE---RSKQ 417
Query: 304 VCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMAR 359
LQ Y + + E+ G + R SS+ S Q V R + WRD +AR
Sbjct: 418 EALQRYERPVYNAETGQGSGGWQDMLIR-------NSSLFSREQFAVFRAVHQWRDKIAR 470
Query: 360 VHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
DE +++VLS Q++ +A+ P + + TI+
Sbjct: 471 SEDEGVQYVLSKQSLFKIAHAMPLDPASLLRTIS 504
>gi|261206146|ref|XP_002627810.1| exosome component 3'-5' exonuclease [Ajellomyces dermatitidis
SLH14081]
gi|239592869|gb|EEQ75450.1| exosome complex exonuclease Rrp6 [Ajellomyces dermatitidis
SLH14081]
Length = 814
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 167/334 (50%), Gaps = 35/334 (10%)
Query: 73 SSGSHPYELEI--------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
+S HPYE EI + PR F + +V+T ++ +
Sbjct: 193 TSYKHPYETEIRNSTYPSSAFAISAPRESNPFETT--------TATFVDTLEGVHSMLAE 244
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVC 183
L + A+D E H S+ G L+QIST ++D++VDT+ +E+ IL FADP +
Sbjct: 245 LKQTTEIAIDLEHHDTHSYHGLVCLMQISTREKDWIVDTLKPWREELQILNEVFADPKII 304
Query: 184 KVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE 243
KV HGS DV+WLQRD +Y+V LFDT A L+ P++SL +LLE + K Q
Sbjct: 305 KVLHGSTMDVIWLQRDLGLYLVGLFDTYHAAVALNYPKRSLKFLLEKFVNFQAEKKYQMA 364
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNT 303
DWR RPL M YA++D HYLLYI +++ E+S ++ +VLE RS
Sbjct: 365 DWRLRPLLPGMFDYARSDTHYLLYIYD----QIRNSLVEHSTPDNNLIAYVLE---RSKQ 417
Query: 304 VCLQVYTKEI---ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMAR 359
LQ Y + + E+ G + R SS+ S Q V R + WRD +AR
Sbjct: 418 EALQRYERPVYNAETGQGSGGWQDMLIR-------NSSLFSREQFAVFRAVHQWRDKIAR 470
Query: 360 VHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
DE +++VLS Q++ +A+ P + + TI+
Sbjct: 471 SEDEGVQYVLSKQSLFKIAHAMPLDPASLLRTIS 504
>gi|183231928|ref|XP_650756.2| exosome component 10 [Entamoeba histolytica HM-1:IMSS]
gi|169802269|gb|EAL45368.2| exosome component 10, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704625|gb|EMD44835.1| exosome complex exonuclease RRP6, putative [Entamoeba histolytica
KU27]
Length = 517
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 165/352 (46%), Gaps = 47/352 (13%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HANKEKSSGSHPYELEITALLE--------NPRP 92
KPQ NF DN +K H+ + HPY EI L + P+P
Sbjct: 120 KPQLNFTDK-PDNFSVEYKPKCIKKYHSKYPVDAQPHPYINEIHELKQMDWQLEKCTPQP 178
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
F L ++V T L E+ +L+ FAVD E HS S+ GF L+QI
Sbjct: 179 PLSFEKTPL--------IYVNTLELLQEMIVSLNHVNQFAVDVEHHSEHSYYGFVCLLQI 230
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
ST DY++DTI L D I++L F +P + KVFHG D D++WL +F +YVVN D+ +
Sbjct: 231 STRSSDYIIDTITLRDSITLLNDPFTNPNIEKVFHGCDFDMIWLSYNFGLYVVNCIDSGQ 290
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
L SL YLL+ YC V +K Q DWR RPL EM++YA+ D HYLLYI L
Sbjct: 291 CARALKLQHFSLKYLLQKYCNVDADKKYQLADWRLRPLTKEMIEYARGDTHYLLYIIDQL 350
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
E G + E +SN +CL+++ + + + R+
Sbjct: 351 RNECIDAG------------VLEEVLNKSNELCLRLFRPTV-------CSDDVIERV--- 388
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
S I D ++L RD +AR+ DES V++ + + N+ P +
Sbjct: 389 -ARRSWIKKTQFDTFKKLYLLRDKIARIEDESPEAVINMTMLSNIVNELPTD 439
>gi|342880534|gb|EGU81622.1| hypothetical protein FOXB_07858 [Fusarium oxysporum Fo5176]
Length = 860
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 152/309 (49%), Gaps = 7/309 (2%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
HPYE EI + R + + + +V+T + E+ L A+D E
Sbjct: 214 HPYEHEIVRMSYPKRVFKESEPIMYQPVETTEATFVDTYEGVLEMLEELKGAKEIAIDLE 273
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H RS++G +L+QIST ++D++VDT+ ++ +L F DP V KVFHG+ D++W
Sbjct: 274 HHDFRSYVGLVSLMQISTREKDWIVDTLQPWRHKLEVLNQVFTDPNVVKVFHGAYMDMVW 333
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YV LFDT ACE L P KSLAYLL + +K Q DWR RPLP EM+
Sbjct: 334 LQRDLGLYVNGLFDTFFACEQLHYPAKSLAYLLSKFVDFDADKQYQLADWRIRPLPEEMM 393
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
YA++D HYLLYI + EL + D ++ A +S L Y E
Sbjct: 394 YYARSDTHYLLYIYDRVRNELVAASDRGDVDKD----YIGRAVEKSKEQSLSRY--EHPG 447
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
Y E S + + + S + R L WRD AR DES +VLS + I
Sbjct: 448 YDEETGEGSRGWYGYIFKNSHLAFDSEQFAVFRALWKWRDNTARKEDESTNYVLSTRDIT 507
Query: 376 ALANKAPAN 384
+A P +
Sbjct: 508 EIARINPPD 516
>gi|342180559|emb|CCC90035.1| putative ribosomal RNA processing protein 6 [Trypanosoma congolense
IL3000]
Length = 745
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 172/356 (48%), Gaps = 38/356 (10%)
Query: 48 KPQHNFKRVLADNSYSPF-------KHANKEKSSGSHPYELEIT--------ALLENPRP 92
+PQ F+ + DN+ +PF K G HP+ I LL+ P
Sbjct: 176 RPQLTFEHPV-DNTATPFCPVYYDEKGIRHVGEPGVHPFAERIKNASISSAQLLLKTETP 234
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
+ L +V+ L + L KE AVD E H S+ GFT L+QI
Sbjct: 235 YLPLDSCPL--------TFVDAVESLQTVVAVLLKETEIAVDLEHHDFYSYQGFTCLMQI 286
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
S+ ED+++D + L + +L P F +P + KV HG+ D+ WLQ+DF +YVVNLFDT+
Sbjct: 287 SSRTEDFIIDCLKLRSHMHLLAPVFLEPSIVKVLHGAREDIRWLQKDFGLYVVNLFDTSV 346
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A + L P SLA+ ++ +C V NK Q DWR RP+PAEM+ YAQ D H+LLY+ L
Sbjct: 347 ALQNLHMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPIPAEMISYAQQDTHFLLYVYDRL 405
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
+Q N N ++ + S + L+ Y K P ++ L
Sbjct: 406 -----KQLLLNCESRATVGNMLVHVFQESRALSLERYEK-----PQLDPDATYKLALGRS 455
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
GG+ S+S + + R + WRD AR D+S V+ ++++A + P + +V
Sbjct: 456 LGGL-SLSQL--QVAREIFNWRDAAAREADDSPSAVMHISCVLSIATRLPLSANEV 508
>gi|407036010|gb|EKE37956.1| exosome component 10, putative [Entamoeba nuttalli P19]
Length = 517
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 165/352 (46%), Gaps = 47/352 (13%)
Query: 48 KPQHNFKRVLADNSYSPFK-------HANKEKSSGSHPYELEITALLE--------NPRP 92
KPQ NF DN +K H+ + HPY EI L + P+P
Sbjct: 120 KPQLNFTDK-PDNFSVEYKPKCIKKYHSKYPVDAQPHPYINEIHELKQMSWQLEKCTPQP 178
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
F L ++V T L E+ +L+ FAVD E HS S+ GF L+QI
Sbjct: 179 PLSFEKTPL--------IYVNTLELLQEMIISLNHVNQFAVDVEHHSEHSYYGFVCLLQI 230
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
ST DY++DTI L D I++L F +P + KVFHG D D++WL +F +YVVN D+ +
Sbjct: 231 STRSSDYIIDTITLRDSITLLNDPFTNPNIEKVFHGCDFDMIWLSYNFGLYVVNCIDSGQ 290
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
L SL YLL+ YC V +K Q DWR RPL EM++YA+ D HYLLYI L
Sbjct: 291 CARALKLQHFSLKYLLQKYCNVDADKKYQLADWRLRPLTKEMIEYARGDTHYLLYIIDQL 350
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
E G + E +SN +CL+++ + + + R+
Sbjct: 351 RNECIDAG------------VLEEVLNKSNELCLRLFRPTV-------CSDDVIERV--- 388
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
S I D ++L RD +AR+ DES +++ + + N+ P +
Sbjct: 389 -ARRSWIKKTQFDTFKKLYLLRDKIARIEDESPESIINMTMLSNIVNELPTD 439
>gi|169617554|ref|XP_001802191.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
gi|111059251|gb|EAT80371.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
Length = 805
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 189/421 (44%), Gaps = 54/421 (12%)
Query: 77 HPYELEITAL--------LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
HPYE EI + + P P F S + +V+T + E+ L
Sbjct: 200 HPYETEINSYDYPPSVYEISEPTPYQPFD--------STTATYVDTPEAVAEMLAELKTA 251
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFH 187
AVD E H RS++G +L+QIST +D++VDT+ ++ L FADP + KV H
Sbjct: 252 KEIAVDLEHHDNRSYIGMVSLMQISTRDKDWIVDTLKPWRRKLECLNEVFADPNILKVLH 311
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
G+ D+MWLQRD +Y+V LFDT A L P SLAYLLE + K Q DWR
Sbjct: 312 GAYMDIMWLQRDLGLYIVGLFDTHHAARSLGYPGGSLAYLLERHVQFKAQKQYQLADWRI 371
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL E+ +YA+ D H+LLYI + EL E S D + N V + +S V LQ
Sbjct: 372 RPLGKELFEYARADTHFLLYIFDNMRNELV----ERSDFSDPEKNKVQDVLIKSKEVALQ 427
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
Y + Y + S + L + V + + R + WRD ++R DES F
Sbjct: 428 RYEHPV--YDAKLGLGSAGWHKLIMRTPV-QFTPQQFSVFRAVHQWRDSLSRKEDESPLF 484
Query: 368 VLSDQAIIALANKAPANRTDVYTTI--------AQADSDVDCLNLSSSLPSPSPVVCSHL 419
++ + A+ ++A P ++ ++ I +AD V + + + S V L
Sbjct: 485 IMPNHAVFSVARAMPVDKAALFNAIQHVSHIIRGKADELVSVITEAKA----SGVTGPEL 540
Query: 420 DDVERQVCNNVENLDDILLANLQ---KCLGPN-----------GSCPLSVFNYVLPAKNN 465
+D V +E++ + A + K P G+ P++ PA
Sbjct: 541 ND----VLKTIEDMKEARYAQFETPKKTAAPPVAPSPQQAPLLGTVPIATPAVRAPASKF 596
Query: 466 W 466
W
Sbjct: 597 W 597
>gi|367047893|ref|XP_003654326.1| hypothetical protein THITE_2117244 [Thielavia terrestris NRRL 8126]
gi|347001589|gb|AEO67990.1| hypothetical protein THITE_2117244 [Thielavia terrestris NRRL 8126]
Length = 882
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 196/401 (48%), Gaps = 52/401 (12%)
Query: 25 RQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFK-------HANKEKSSG-- 75
R+ +R R N +S + KPQ+ F++ + P+K HA S
Sbjct: 124 REVKRPRTTNDRLDWSLKRANILKPQNAFEKKTDNFESGPWKPLLTNKPHAQVPLESSLE 183
Query: 76 -----------SHPYELEITAL-----LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLN 119
HPYE EIT + + P + L +++S + +WV+T +
Sbjct: 184 LFTDEEGHPQYKHPYEHEITTMRYPTEVSQPCEPKKY----LPIEKSKA-IWVDTYDGVL 238
Query: 120 ELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT-IALHDEISILQPFFA 178
E+ L + A+D E H R++ G +L+QIST ++D++VDT + ++ +L FA
Sbjct: 239 EMLEELKQATEIAIDLEHHDYRTYAGLLSLMQISTREKDWIVDTLVPWRHKLEVLNEVFA 298
Query: 179 DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK 238
DP + KV HG+ D++WLQRD +YVV LFDT AC+ L +SLA+LL+ + +K
Sbjct: 299 DPRIVKVLHGAFMDIIWLQRDLGLYVVGLFDTYYACDALGYAGRSLAFLLKKFADFDADK 358
Query: 239 FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK-FNFVLEA 297
Q DWR RPLP EM YA++D HYLLYI L EL + ++ P +K + V++
Sbjct: 359 KYQLADWRIRPLPDEMFYYARSDTHYLLYIYDMLRNELAELSAQSP--PGEKPIDRVIQ- 415
Query: 298 SRRSNTVCLQVYTKEI---ESYPGEAAASSIFFR---LLNGQGGVSSISSVTQDLVRRLC 351
+S V LQ Y + E+ G + + L NG+ + + +
Sbjct: 416 --KSKEVSLQRYVHPLCDRETGAGSRGWYNTLIKSPTLYNGEQFA---------VYKAVH 464
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
WRD +AR DES ++++ Q + +A P + +++ +
Sbjct: 465 KWRDDVARREDESPYYIMTQQVLADIARILPTDPKALWSLL 505
>gi|326473059|gb|EGD97068.1| hypothetical protein TESG_04488 [Trichophyton tonsurans CBS 112818]
Length = 898
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 173/352 (49%), Gaps = 32/352 (9%)
Query: 39 YSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSN 98
+ L+S+P + L + P K N HPYE EI A P ++ +
Sbjct: 170 FRPLLKSKPHALVGLEESLGGSIEDPTKPYN-------HPYEKEIEAST-YPARVYEKAE 221
Query: 99 VDLDLQRSDS-FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
+ +DS ++VET ++ + + L + AVD E H + G L+QIST ++
Sbjct: 222 PTMYTPVADSKAIFVETLEDVHAMLSQLKQAEEIAVDLEHHDSHVYHGLVCLMQISTREQ 281
Query: 158 DYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
D++VDT+ D++ +L FADP + KV HGS DV+WLQRD +Y+V LFDT A
Sbjct: 282 DWIVDTLKPWRDQLQVLNEVFADPSIIKVLHGSSMDVIWLQRDLGLYLVGLFDTFHAASA 341
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L P+KSL +LL Y G +K Q DWR RPL A ML YA++D H+LLYI L +L
Sbjct: 342 LQLPKKSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLRNQL 401
Query: 277 KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV 336
+E+ + A R C + T + + G +
Sbjct: 402 LDLPSESGFG----------AGGREAIDCTERPTYDAATGRGSGGWHDML---------S 442
Query: 337 SSISSVTQD---LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+S ++T++ + R L WRD AR DES + VLS +A+ LA + P ++
Sbjct: 443 NSPVALTREQFAVFRALHEWRDKTARADDESPQTVLSKRALFRLAQEMPEDK 494
>gi|343471692|emb|CCD15945.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 604
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 172/356 (48%), Gaps = 38/356 (10%)
Query: 48 KPQHNFKRVLADNSYSPF-------KHANKEKSSGSHPYELEIT--------ALLENPRP 92
+PQ F+ + DN+ +PF K G HP+ I LL+ P
Sbjct: 176 RPQLTFEHPV-DNTATPFCPVYYDEKGIRHVGEPGVHPFAERIKNASISSAQLLLKTETP 234
Query: 93 EFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI 152
+ L +V+ L + L KE AVD E H S+ GFT L+QI
Sbjct: 235 YLPLDSCPL--------TFVDAVESLQAVVAVLLKETEIAVDLEHHDFYSYQGFTCLMQI 286
Query: 153 STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
S+ ED+++D + L + +L P F +P + KV HG+ D+ WLQ+DF +YVVNLFDT+
Sbjct: 287 SSRTEDFIIDCLKLRSHMHLLAPVFLEPSIVKVLHGAREDIRWLQKDFGLYVVNLFDTSV 346
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A + L P SLA+ ++ +C V NK Q DWR RP+PAEM+ YAQ D H+LLY+ L
Sbjct: 347 ALQNLHMPH-SLAFAVDHFCQVKLNKKYQTADWRVRPIPAEMISYAQQDTHFLLYVYDRL 405
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNG 332
+Q N N ++ + S + L+ Y K P ++ L
Sbjct: 406 -----KQLLLNCESRATVGNMLVHVFQESRALSLERYEK-----PQLDPDATYKLALGRS 455
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
GG+ S+S + + R + WRD AR D+S V+ ++++A + P + +V
Sbjct: 456 LGGL-SLSQL--QVAREIFNWRDAAAREADDSPSAVMHISCVLSIATRLPLSANEV 508
>gi|325088958|gb|EGC42268.1| exosome complex exonuclease RRP6 [Ajellomyces capsulatus H88]
Length = 807
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 170/324 (52%), Gaps = 15/324 (4%)
Query: 73 SSGSHPYELEITALLENPRPEFDFS-NVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
+S HPYE EI P + S L + + +V+T ++ + L +
Sbjct: 193 TSYKHPYETEIRNST-YPSSVYTISVPGKLAPFETTTATFVDTLEGIHSMLAELKEVTEI 251
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSD 190
A+D E H S+ G L+QIST +D++VDT+ +E+ +L F+DP + KV HGS
Sbjct: 252 AIDLEHHDAHSYHGLVCLMQISTRDKDWIVDTLKPWREELQVLNEVFSDPKILKVLHGST 311
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRD +Y+V LFDT A L+ P+KSL +LLE + K Q DWR RPL
Sbjct: 312 MDVIWLQRDLGLYIVGLFDTYHAAVALNYPKKSLKFLLEKFANFQAEKKYQIADWRLRPL 371
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
M YA++D HYLLYI + +L E+S ++ ++VLE RS LQ Y
Sbjct: 372 LPGMFDYARSDTHYLLYIYDQIRNDLI----EHSTPSNNLIDYVLE---RSKQEALQRYE 424
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMARVHDESLRFVL 369
+ + Y E I +R + + S++ S Q V R + WRD +AR DE +++VL
Sbjct: 425 RPV--YNAETGEGRIGWRDMLIRN--STLFSREQFAVFRAVHQWRDKIARSEDEGVQYVL 480
Query: 370 SDQAIIALANKAPANRTDVYTTIA 393
S Q++ +A+ P + + T++
Sbjct: 481 SKQSLFKIAHAMPLDPVSLLRTVS 504
>gi|225560671|gb|EEH08952.1| exosome complex exonuclease RRP6 [Ajellomyces capsulatus G186AR]
Length = 807
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 170/324 (52%), Gaps = 15/324 (4%)
Query: 73 SSGSHPYELEITALLENPRPEFDFS-NVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
+S HPYE EI P + S L + + +V+T ++ + L +
Sbjct: 193 TSYKHPYETEIRNST-YPSSVYTISVPGKLAPFETTTATFVDTLEGIHSMLAELKEVTEI 251
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSD 190
A+D E H S+ G L+QIST +D++VDT+ +E+ +L F+DP + KV HGS
Sbjct: 252 AIDLEHHDAHSYHGLVCLMQISTRDKDWIVDTLKPWREELQVLNEVFSDPKILKVLHGST 311
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRD +Y+V LFDT A L+ P+KSL +LLE + K Q DWR RPL
Sbjct: 312 MDVIWLQRDLGLYIVGLFDTYHAAVALNYPKKSLKFLLEKFANFQAEKKYQIADWRLRPL 371
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
M YA++D HYLLYI + +L E+S ++ ++VLE RS LQ Y
Sbjct: 372 LPGMFDYARSDTHYLLYIYDQIRNDLI----EHSTPSNNLIDYVLE---RSKQEALQRYE 424
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMARVHDESLRFVL 369
+ + Y E I +R + + S++ S Q V R + WRD +AR DE +++VL
Sbjct: 425 RPV--YNAETGEGRIGWRDMLIRN--STLFSREQFAVFRAVHQWRDKIARSEDEGVQYVL 480
Query: 370 SDQAIIALANKAPANRTDVYTTIA 393
S Q++ +A+ P + + T++
Sbjct: 481 SKQSLFKIAHAMPLDPVSLLRTVS 504
>gi|67593930|ref|XP_665760.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656583|gb|EAL35530.1| hypothetical protein Chro.50386, partial [Cryptosporidium hominis]
Length = 875
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 150/312 (48%), Gaps = 46/312 (14%)
Query: 123 NALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGV 182
N S F A+D E HS +S+ GF +LIQ+ST DY++D L +EI +L A+P +
Sbjct: 296 NEESSPFLLAIDVEHHSNQSYKGFVSLIQLSTRTHDYIIDPFNLFNEIQMLNELTANPKI 355
Query: 183 CKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVATNKFLQ 241
KV HGSD D++WLQRDF +Y+VN+FDT +A +L+ P SL LL YC + +K Q
Sbjct: 356 LKVLHGSDYDIIWLQRDFSVYIVNMFDTGQAARILNTPGGYSLKNLLSIYCSLDIDKRFQ 415
Query: 242 REDWRQRPLPAEMLQYAQTDAHYLLY---IAKCLVAELKQQGNENSYCPDDKF------- 291
DWR+RPL E+++YA+ D HYLLY I K L+ + + E D F
Sbjct: 416 LADWRERPLSNELIEYARGDTHYLLYIYDIMKNLLLLHRHKNTEPPVLASDAFMEVNDNL 475
Query: 292 -----------------NFVLEASRRSNTVCL----------------QVYTKEIESYPG 318
NF++E S V + Q+ KE P
Sbjct: 476 IILKPDIIERMDFGSYNNFLIEGENGSKLVKVTDLDPSALLTVLHNSRQICLKEYFEKPL 535
Query: 319 EAAASSIFFRL-LNGQGGVSSISSVTQDLVR-RLCAWRDLMARVHDESLRFVLSDQAIIA 376
+ + R ++ + I S LV L WRD +AR+ D S +VL + II
Sbjct: 536 DVWSLCYGVRTKISKSSYKTPIDSAIVTLVSYYLFIWRDSIARLLDVSPSYVLKESMIIK 595
Query: 377 LANKAPANRTDV 388
+ K P N ++
Sbjct: 596 ICQKQPMNSVEI 607
>gi|66357594|ref|XP_625975.1| RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD
domain and an HRDc domain [Cryptosporidium parvum Iowa
II]
gi|46227246|gb|EAK88196.1| RRPp/PMC2 like exosome 3'-5' exoribonuclease subunit with an RNAseD
domain and an HRDc domain [Cryptosporidium parvum Iowa
II]
Length = 957
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 150/312 (48%), Gaps = 46/312 (14%)
Query: 123 NALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGV 182
N S F A+D E HS +S+ GF +LIQ+ST DY++D L +EI +L A+P +
Sbjct: 296 NEESSPFLLAIDVEHHSNQSYKGFVSLIQLSTRTHDYIIDPFNLFNEIQMLNELTANPKI 355
Query: 183 CKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVATNKFLQ 241
KV HGSD D++WLQRDF +Y+VN+FDT +A +L+ P SL LL YC + +K Q
Sbjct: 356 LKVLHGSDYDIIWLQRDFSVYIVNMFDTGQAARILNTPGGYSLKNLLSIYCSLDIDKRFQ 415
Query: 242 REDWRQRPLPAEMLQYAQTDAHYLLY---IAKCLVAELKQQGNENSYCPDDKF------- 291
DWR+RPL E+++YA+ D HYLLY I K L+ + + E D F
Sbjct: 416 LADWRERPLSNELIEYARGDTHYLLYIYDIMKNLLLLHRHKNTEPPVLASDAFMEVKDNL 475
Query: 292 -----------------NFVLEASRRSNTVCL----------------QVYTKEIESYPG 318
NF++E S V + Q+ KE P
Sbjct: 476 IILKPDIIERMDFGSYHNFLIEGENGSKLVKVTDLDPSALLTVLHNSRQICLKEYFEKPL 535
Query: 319 EAAASSIFFRL-LNGQGGVSSISSVTQDLVR-RLCAWRDLMARVHDESLRFVLSDQAIIA 376
+ + R ++ + I S LV L WRD +AR+ D S +VL + II
Sbjct: 536 DVWSLCYGVRTKISKSSYKTPIDSAIVTLVSYYLFIWRDSIARLLDVSPSYVLKESMIIK 595
Query: 377 LANKAPANRTDV 388
+ K P N ++
Sbjct: 596 ICQKQPMNSVEI 607
>gi|240280781|gb|EER44285.1| exosome complex exonuclease RRP6 [Ajellomyces capsulatus H143]
Length = 671
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 170/324 (52%), Gaps = 15/324 (4%)
Query: 73 SSGSHPYELEITALLENPRPEFDFS-NVDLDLQRSDSFVWVETKSQLNELANALSKEFFF 131
+S HPYE EI P + S L + + +V+T ++ + L +
Sbjct: 193 TSYKHPYETEIRNS-TYPSSVYTISVPGKLAPFETTTATFVDTLEGIHSMLAELKEVTEI 251
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSD 190
A+D E H S+ G L+QIST +D++VDT+ +E+ +L F+DP + KV HGS
Sbjct: 252 AIDLEHHDAHSYHGLVCLMQISTRDKDWIVDTLKPWREELQVLNEVFSDPKILKVLHGST 311
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRD +Y+V LFDT A L+ P+KSL +LLE + K Q DWR RPL
Sbjct: 312 MDVIWLQRDLGLYIVGLFDTYHAAVALNYPKKSLKFLLEKFANFQAEKKYQIADWRLRPL 371
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
M YA++D HYLLYI +++ E+S ++ ++VLE RS LQ Y
Sbjct: 372 LPGMFDYARSDTHYLLYIYD----QIRNDLIEHSTPSNNLIDYVLE---RSKQEALQRYE 424
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMARVHDESLRFVL 369
+ + Y E I +R + + S++ S Q V R + WRD +AR DE +++VL
Sbjct: 425 RPV--YNAETGEGRIGWRDMLIRN--STLFSREQFAVFRAVHQWRDKIARSEDEGVQYVL 480
Query: 370 SDQAIIALANKAPANRTDVYTTIA 393
S Q++ +A+ P + + T++
Sbjct: 481 SKQSLFKIAHAMPLDPVSLLRTVS 504
>gi|452835556|gb|AGG14045.1| exosome subunit RRP6p-like protein [Leishmania braziliensis]
Length = 735
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 149/274 (54%), Gaps = 14/274 (5%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+V+T + + + L AVD E H S+ G T L+QIST +ED++VD + L +
Sbjct: 235 FVDTPAAMQAMVAKLLLSSEIAVDLEHHDFYSYQGITCLMQISTREEDFIVDCLQLRSLM 294
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
L P F +P + KV HG+ D+ WLQ+DF +Y+VN FDT A + L P SLA+ ++
Sbjct: 295 GTLAPVFLNPLILKVLHGAREDIRWLQKDFSLYLVNFFDTGVALQTLHMPY-SLAFAVDH 353
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+C V NK Q DWR RPL AEM+ YA+ D H+LLY+ L A L NS
Sbjct: 354 FCQVKLNKKFQTADWRVRPLSAEMVHYARQDTHFLLYVYDRLKALLL-----NSEGRAIV 408
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
N ++ + S + LQ+Y K + P E +++ G+ +S ++ V + + R +
Sbjct: 409 GNLLVHVYKESKQLSLQLYEKP-QVVPEET------YKIALGR-SLSGLNKVQEKVARDV 460
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
WRD AR D+S VL +++A+A+K PA
Sbjct: 461 FNWRDSAAREVDDSPTAVLHLSSVLAIASKLPAT 494
>gi|154278361|ref|XP_001539994.1| exosome component 3'-5' exonuclease [Ajellomyces capsulatus NAm1]
gi|150413579|gb|EDN08962.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 807
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 13/286 (4%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHD 168
+V+T ++ + L + A+D E H S+ G L+Q+ST +D++VDT+ +
Sbjct: 230 TFVDTLEGIHSMLAELKEVTEIAIDLEHHDAHSYHGLVCLMQLSTRDKDWIVDTLKPWRE 289
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
E+ +L F+DP + KV HGS DV+WLQRD +Y+V LFDT A L+ P+KSL +LL
Sbjct: 290 ELQVLNEVFSDPKILKVLHGSTMDVIWLQRDLGLYIVGLFDTYHAAVALNYPKKSLKFLL 349
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
E + K Q DWR RPL M YA++D HYLLYI + +L E+S +
Sbjct: 350 EKFVNFQAEKKYQIADWRLRPLLPGMFDYARSDTHYLLYIYDHIRNDLI----EHSTPSN 405
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV- 347
+ ++VLE RS LQ Y + + Y E I +R + + S++ S Q V
Sbjct: 406 NLIDYVLE---RSKQEALQRYERPV--YNAETGEGRIGWRDMLVRN--STLFSREQFAVF 458
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
R + WRD +AR DE +++VLS Q++ +A+ P + + T++
Sbjct: 459 RAVHQWRDKIARFEDEGVQYVLSKQSLFKIAHAMPLDPVSLLRTVS 504
>gi|396483292|ref|XP_003841672.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
gi|312218247|emb|CBX98193.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
Length = 783
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 167/330 (50%), Gaps = 34/330 (10%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQRSDSF-----VWVETKSQLNELANALSKEFFF 131
HPY+ EI E P + + + QR + F ++V+T L + L
Sbjct: 183 HPYQTEIETY-EYPPSLYKHA----EPQRYEPFESTTAIFVDTPEALASMLAELKTAKEI 237
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSD 190
AVD E H RS++G +L+QIST +D++VDT+ ++ L FA+P + KV HG+
Sbjct: 238 AVDLEHHDNRSYIGIVSLMQISTRNQDWIVDTLKPWRRKLECLNEVFANPDIIKVLHGAY 297
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+MWLQRD +YVV LFDT A L P SLAYLL+ + G K Q DWR RPL
Sbjct: 298 MDIMWLQRDLGLYVVGLFDTYHAARSLGYPGASLAYLLDRFIGFKAQKQYQIADWRIRPL 357
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
E+ +YA+ D H+LLYI + EL ++ ++ S +K VLE S+ + LQ Y
Sbjct: 358 GKELFEYARADTHFLLYIFDNMRNELVEK-SDLSNVEKNKVRDVLEKSKET---ALQRY- 412
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ--------DLVRRLCAWRDLMARVHD 362
E F L G GG + S T + R + WRD ++R D
Sbjct: 413 --------EHPVYDEKFGL--GTGGWYKLISRTPVQFTPQQFAVFRAVHQWRDELSRQED 462
Query: 363 ESLRFVLSDQAIIALANKAPANRTDVYTTI 392
ES F++ + A+ ++A P++++ +Y +
Sbjct: 463 ESPLFIMPNHAVFSVARAMPSDKSALYNAV 492
>gi|313242411|emb|CBY34559.1| unnamed protein product [Oikopleura dioica]
Length = 420
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 117/193 (60%), Gaps = 3/193 (1%)
Query: 76 SHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDT 135
SHPYE EI + P + + VE+ N + L +E AVD
Sbjct: 226 SHPYEEEIKSC---GVPSASDNVTEYKALDDTPLSVVESSLSFNLMMQELREESELAVDL 282
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMW 195
E H RS+ GFT L+QIS+ ++DY++D +A+ +++ L FA+P + K+FHGS ND++W
Sbjct: 283 EHHRYRSYQGFTCLVQISSRQKDYILDPLAVWEDMYKLNEVFANPKIVKIFHGSRNDMLW 342
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRDF +YVVNLFDT A + L +KSL YLL+ YC + +K Q DWR RP+P ML
Sbjct: 343 LQRDFGVYVVNLFDTFFAAKKLDLAKKSLDYLLQHYCKIRLDKRFQLADWRMRPIPPNML 402
Query: 256 QYAQTDAHYLLYI 268
+YA+ D HYLLY+
Sbjct: 403 RYARQDTHYLLYV 415
>gi|320583859|gb|EFW98072.1| hypothetical protein HPODL_0702 [Ogataea parapolymorpha DL-1]
Length = 729
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 186/384 (48%), Gaps = 61/384 (15%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEITAL---------LENPRPEFDFSN 98
KPQ FK + + SPFK K K + P + + + ENP ++ N
Sbjct: 136 KPQLLFKTPVNNFETSPFKPLIKTKPNALIPLQESMQLVSAAPDVPEHYENPY-SYEIMN 194
Query: 99 ---VDLDLQRSDSF-----------VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFL 144
D LQ+ +SF W++ +QL++L LSK AVD E H R++
Sbjct: 195 QPYPDWILQQQESFDSIPWKECDEPTWIDNPAQLDDLLVELSKCKVIAVDLEHHDYRTYH 254
Query: 145 GFTALIQISTE-KEDYLVDTIA--LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
G T L+Q++T+ K+DYL+D ++ L + L F DP + KVFHG+ D++WLQRD
Sbjct: 255 GITCLMQLTTDTKKDYLIDPLSPELRPHLVNLNVIFTDPNIVKVFHGAFMDIIWLQRDLG 314
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
+YVV+LFDT A L + SLA+LLETY T+K Q DWR RPL +EM YA+ D
Sbjct: 315 LYVVSLFDTYHASRELGLGRHSLAHLLETYVKFKTSKKWQLADWRMRPLNSEMKNYAKAD 374
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT---KEIESYPG 318
H+L+ + + +EL Q DK VL SR+ + + T + ++S G
Sbjct: 375 THFLIEVFYKMHSELVQNP--------DKLKKVLYESRKVSNRRYEYSTFKPRNVKSANG 426
Query: 319 EAAASSIFF---------RLLNGQGGV--------------SSISSVTQDLVRRLCAWRD 355
++ + + NG V +SI + L+ L WRD
Sbjct: 427 FSSGAEVVATNQSVPQLPEFKNGLVSVHNPTNLPWSNLADSNSIPMAKRPLLEVLFKWRD 486
Query: 356 LMARVHDESLRFVLSDQAIIALAN 379
AR DES R+++SD +++L N
Sbjct: 487 EQARREDESPRYIMSDFMLVSLVN 510
>gi|346326755|gb|EGX96351.1| exosome complex exonuclease Rrp [Cordyceps militaris CM01]
Length = 852
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 175/360 (48%), Gaps = 29/360 (8%)
Query: 77 HPYELEITALLENPRPEFDFSNVD-LDLQRSDSFV--WVETKSQLNELANALSKEFFFAV 133
HPYE EI L+ P+ F D + Q +++ WV+T + E+ L + A+
Sbjct: 190 HPYEPEI---LQGTYPDSVFKVADPIPWQPTETTTAKWVDTYEDVLEMLKDLKRADEIAI 246
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDND 192
D E H R++ G +L+QIST ++D++VDT+ ++ +L FADP + KVFHG+ D
Sbjct: 247 DLEHHDFRTYTGLVSLMQISTRQQDWIVDTLQPWRHKLEVLNEVFADPSIVKVFHGAYMD 306
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +YV LFDT AC+ L +SLA+LL + +K Q DWR RP+P
Sbjct: 307 MIWLQRDLGLYVNGLFDTYFACQQLGYSGRSLAFLLSKFADFDADKQYQLADWRIRPIPE 366
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE 312
EML YA++D HYLL+I + +L N S D + LE SR ++ V++
Sbjct: 367 EMLYYARSDTHYLLHIYDQVRNDLVSSSN-RSVPEQDLISRALEKSREL-SLSRHVHSGY 424
Query: 313 IESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
E GE + + L + + L + + WRD AR DES FVL
Sbjct: 425 NEET-GEGSRGWYNYVLKHSHLAYDAAQFT---LFKTIWKWRDDTARKEDESPNFVLGTN 480
Query: 373 AIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVEN 432
+ + +P D L S +P +P+ S +D++ +V N
Sbjct: 481 HLADVCRASPP----------------DAKALHSLMPLTAPMARSRIDEIWVRVLEASHN 524
>gi|255934162|ref|XP_002558362.1| Pc12g15620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582981|emb|CAP81189.1| Pc12g15620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 756
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 177/378 (46%), Gaps = 52/378 (13%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HA-----------NKEKSSG-SHPYELEITALL 87
PKPQ F+R + PFK HA E + G HPYE EI A
Sbjct: 141 PKPQLLFQRKPDNTDMGPFKPLLESKPHAIVPLEKCLKTKQMEGAIGYPHPYEAEILAS- 199
Query: 88 ENPRPEFDFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
E P + S V+ S + +V+T + ++ L + A+D E H + S+ G
Sbjct: 200 EYPNSVYQVSPPVEYLPFESTTATFVDTLDGVRQMLKELKQAKEIAIDLEHHDVHSYHGL 259
Query: 147 TALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
+L+QIST +D++VDT+ +++ +L FADP + KV HGS D++WLQRD +YVV
Sbjct: 260 VSLMQISTRDKDWVVDTLQPWREDLQMLNEVFADPKILKVLHGSTMDIIWLQRDLGLYVV 319
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL 265
+FDT A L P++SL +LL + +K Q DWR RPLP M YA++D HYL
Sbjct: 320 GMFDTFHAASALGFPKRSLKFLLSKFVNFEADKRYQTADWRARPLPPAMFDYARSDTHYL 379
Query: 266 LYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI 325
LYI L +L E++ ++V E RS LQ Y + +
Sbjct: 380 LYIYDRLRNDLIDNSTEDA----SHIDYVNE---RSKHEALQRYERPV------------ 420
Query: 326 FFRLLNGQGG----------VSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
+ +NG G +++S + + + WRD +AR DE + V +
Sbjct: 421 -YDAVNGYGPGGWYDLLWRHSANLSKEQFAVFKAVHQWRDEVARAEDEGWQCVFPKHMLF 479
Query: 376 ALANKAPANRTDVYTTIA 393
LA P + ++ T++
Sbjct: 480 KLATVMPLDMGSLFRTLS 497
>gi|145352778|ref|XP_001420714.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580949|gb|ABO99007.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 176
Score = 165 bits (417), Expect = 1e-37, Method: Composition-based stats.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI- 170
VET L ELA L + FAVD E HS RSF GFT L+QIST + D++VD +AL +
Sbjct: 10 VETVDALEELAAHLEECKEFAVDLEHHSYRSFKGFTCLMQISTRERDFVVDVLALRSHVR 69
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
L FAD KV HG+DNDV WLQ+DF ++V LFDT +A VL P K LAYLL
Sbjct: 70 DALGKAFADADKLKVMHGADNDVQWLQKDFGMFVSCLFDTGQAARVLELPSKGLAYLLHH 129
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
YCG+ NK Q DWR RPL EM++YA+ D H+LLY+ L L+
Sbjct: 130 YCGIKANKRFQLADWRLRPLTKEMVEYARGDTHHLLYVHDRLKEALR 176
>gi|145485444|ref|XP_001428730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395818|emb|CAK61332.1| unnamed protein product [Paramecium tetraurelia]
Length = 669
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 186/369 (50%), Gaps = 36/369 (9%)
Query: 32 KLNQCP-----QYSCYLQSEPKPQHNFKRVLADNSYSPF--KHANKEKSSGSHPYELEIT 84
+LN+ P +Y Y Q+E + K + A N+ + F K+A +E +HPY EIT
Sbjct: 116 QLNKLPFIPVLKYKHYAQTE----LDQKIIEAQNNPTLFFEKYAIEE---FTHPYYEEIT 168
Query: 85 ALLENPRPEFDFSNVDLDLQRSDSF---VWVETKSQLNELA----NALSKEFF--FAVDT 135
L P+ +V + R + + L EL N + + F AVD
Sbjct: 169 RL----TPQDFVLDVPPKINRYRDLEPPIMINNADNLGELVLKIQNEVDQNGFSEIAVDL 224
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVM 194
E + S+LG T LIQ+ST +DY++D L ++ +L F +P + KVFHG+DNDV
Sbjct: 225 EHNHSISYLGVTCLIQLSTRTQDYIIDPFPLWKQLGDMLSVVFTNPRIVKVFHGADNDVQ 284
Query: 195 WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEM 254
WLQRDF +Y+VNLFDT +A + L Q S +LL YC +T+K Q DW QRPL EM
Sbjct: 285 WLQRDFGLYIVNLFDTFQASKELLLMQNSFQFLLSEYCKKSTDKTYQTADWTQRPLSDEM 344
Query: 255 LQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIE 314
++YAQ D HYLLYI + +LK+ N + ++ +RS L++Y K ++
Sbjct: 345 IKYAQIDTHYLLYIYDRMRQDLKKLNKPNENLNNVPNYYIESVLKRSKDTALKIYKKPLQ 404
Query: 315 SYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAI 374
+ + +I LN Q + + DL+ +L R+ + +D++ R+ L + +
Sbjct: 405 D--QDQSLQTI----LNKQD--RRMEAKNFDLMVKLLELREELGIQYDQNPRYFLPNPFL 456
Query: 375 IALANKAPA 383
L P
Sbjct: 457 FKLVESKPT 465
>gi|330926290|ref|XP_003301407.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
gi|311323973|gb|EFQ90519.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 181/374 (48%), Gaps = 42/374 (11%)
Query: 47 PKPQHNFKRVLADNSYSPFK-------HAN----------KEKSSGS---HPYELEI--- 83
PKPQ F+ + +N F+ HA K++ HPY+ EI
Sbjct: 133 PKPQLKFEHLPTNNETGGFRPLLTSKPHAKIPLEECLKTFKDRRGWEQYPHPYQTEIEQY 192
Query: 84 ---TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
+AL E P+ ++ + S + V+T L + L A+D E H
Sbjct: 193 EYPSALYETAEPQ-QYAPFN-----STTATLVDTPEALAAMLAELKTAKEIAIDLEHHDN 246
Query: 141 RSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRD 199
R+++G L+QIST +D++VDT+ ++ L FADP + KV HG+ D++WLQRD
Sbjct: 247 RTYIGMVCLMQISTRDKDWIVDTLKPWRRKLECLNEVFADPSILKVLHGAFMDIIWLQRD 306
Query: 200 FHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQ 259
+Y+V LFDT A L SLAYLLE + K Q DWRQRPL E+ +YA+
Sbjct: 307 LGLYIVGLFDTFHAARALGYQAASLAYLLELHVNFKAQKQYQLADWRQRPLSKELFEYAR 366
Query: 260 TDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGE 319
D H+LLYI + EL N++ + +K N V + + S L+ Y I Y E
Sbjct: 367 ADTHFLLYIFDNMRNELV---NKSDFSNPEK-NKVQDVLQNSKETSLKRYEHPI--YDSE 420
Query: 320 AA-ASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
++ +++L++ + + + R + WRD + R DES F++ + A+ ++A
Sbjct: 421 TGLGTAGWYKLISRTPAQFTREQFS--VFRAVHEWRDTLGRKEDESPLFIMPNHAVFSVA 478
Query: 379 NKAPANRTDVYTTI 392
P+N+ ++ I
Sbjct: 479 RDMPSNKVGLFNAI 492
>gi|440640360|gb|ELR10279.1| hypothetical protein GMDG_04665 [Geomyces destructans 20631-21]
Length = 782
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 165/322 (51%), Gaps = 18/322 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVD----LDLQRSDSFVWVETKSQLNELANALSKEFFFA 132
HPYE EI L P + N D L ++ S S +V+T + E+ L A
Sbjct: 189 HPYETEIEKL---KYPASVYKNADPIPYLPVE-STSATFVDTYEGVLEMLAELRTAKEIA 244
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDN 191
+D E H RS+ G +L+QIST ++D++VDT+ ++ +L F DP + KV HG+
Sbjct: 245 IDLEHHDARSYTGLVSLMQISTREKDWIVDTLKPWRQDLQVLNEVFTDPKILKVLHGAFM 304
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D++WLQRD +Y+V LFDT AC+ L SLA+LL+ + +K Q DWR RPLP
Sbjct: 305 DILWLQRDLGLYIVGLFDTNHACKALGYAGGSLAFLLKKFIDFDADKKYQMADWRIRPLP 364
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK 311
M YA+ D H+LLYI + EL ++ ++ +++ VL R+S L Y
Sbjct: 365 EGMFFYARADTHFLLYIYDNMRNELVER-SKPVPAEENRLEIVL---RKSKETSLFRYDS 420
Query: 312 EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV-RRLCAWRDLMARVHDESLRFVLS 370
+ F L+ V S+ + Q V R + AWRD +AR D+S FV++
Sbjct: 421 PRYNATTGKGPGGWFQALVK----VPSLLNNEQFAVFRAVHAWRDKIARQDDDSTNFVMA 476
Query: 371 DQAIIALANKAPANRTDVYTTI 392
+ ++++A P + + T+
Sbjct: 477 NHTLLSVAKVMPTDMASLLGTV 498
>gi|238484333|ref|XP_002373405.1| exosome complex exonuclease Rrp6, putative [Aspergillus flavus
NRRL3357]
gi|220701455|gb|EED57793.1| exosome complex exonuclease Rrp6, putative [Aspergillus flavus
NRRL3357]
Length = 434
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 145/267 (54%), Gaps = 19/267 (7%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEK------------SSGSHPYELEITALLENPRPEF 94
PKPQ F+R + + SPFK + K SS +PYE EI A P +
Sbjct: 146 PKPQLYFERQVDNADDSPFKPLLRTKPHAVVPLEKSVESSDRNPYETEIRAA-RYPESTY 204
Query: 95 DFSN-VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIS 153
S+ V S + +V+T + E+ L A+D E H + S+ G +L+QIS
Sbjct: 205 AVSSPVPYQPWESTTATFVDTLEGVKEMLEELKSAKEIAIDLEHHDVHSYQGLVSLMQIS 264
Query: 154 TEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAK 212
T +D++VDT+ +E+ +L FADP + KVFHGS D++WLQRD +YVV +FDT
Sbjct: 265 TRDKDWVVDTLKPWREELQMLNEVFADPSILKVFHGSSMDIIWLQRDLGLYVVGMFDTYH 324
Query: 213 ACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
A L+ P++SL +LL+ + +K Q DWR RP+P M YA++D HYLL+I L
Sbjct: 325 AACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIFDHL 384
Query: 273 VAELKQQGNENSYCPDDKFNFVLEASR 299
EL ENS ++ ++VLE S+
Sbjct: 385 RNELI----ENSTPENNLIDYVLEKSK 407
>gi|156400872|ref|XP_001639016.1| predicted protein [Nematostella vectensis]
gi|156226141|gb|EDO46953.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 129/212 (60%), Gaps = 17/212 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC++ A DG +L +RKK +WYL + + +LV ++P + L FEP GRP DE +
Sbjct: 229 KSPLYTNCQLQAPDGTVLSTLERKKADWYLDKGIGELVAEDPYTVRLKFEPSGRP-DEED 287
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+NICV CG+G+ YLR I+P YR HFP +K H SHDIVL+C +CH V+
Sbjct: 288 KYYLTFKQNICVVCGQGDSYLRKNIVPHEYRRHFPLCMKDHHSHDIVLMCPECHRVSAFH 347
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
E +++++ E+ PL K +R +T ++R+AA AL+H G
Sbjct: 348 DEHLRQRLAREYDAPL-------GNKELSRVIHDPILT---------KIRSAAKALIHAG 391
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+P +RR+EL+ IV +Y E++ E +E A
Sbjct: 392 DKIPPHRRQELQEIVQSHYHATELTPELIEEA 423
>gi|189194651|ref|XP_001933664.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979228|gb|EDU45854.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 786
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 171/373 (45%), Gaps = 40/373 (10%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSSGS--------------------HPYELEI--- 83
PKPQ F+ + +N F+ K HPY+ EI
Sbjct: 123 PKPQLKFEHLPTNNETGGFRPLLTSKPHAKIPLEECLKTFKDRRGLEQYPHPYQTEIEQY 182
Query: 84 ---TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSL 140
L E P+ ++ D S + V+T L + L A+D E H
Sbjct: 183 EYPPTLYETAEPQ-QYAPFD-----STTATLVDTPEALAAMLAELKTAKEIAIDLEHHDN 236
Query: 141 RSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRD 199
R+++G L+QIST +D++VDT+ ++ L FADP + KV HG+ D++WLQRD
Sbjct: 237 RTYIGMVCLMQISTRDKDWIVDTLKPWRRKLECLNEVFADPSILKVLHGAFMDIVWLQRD 296
Query: 200 FHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQ 259
+Y+V LFDT A L SLAYLLE + K Q DWRQRPL E+ +YA+
Sbjct: 297 LGLYIVGLFDTFHAARALGYQAASLAYLLELHVNFKAQKQYQLADWRQRPLSKELFEYAR 356
Query: 260 TDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGE 319
D H+LLYI + EL N++ + +K N V + + S L+ Y I Y E
Sbjct: 357 ADTHFLLYIFDNMRNELV---NKSDFSNPEK-NKVQDVLQNSKETSLKRYEHPI--YDSE 410
Query: 320 AAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
+ + L + V + + R + WRD + R DES F++ + A+ ++A
Sbjct: 411 TGLGTAGWYKLISRTPV-QFTRQQFSVFRAVHEWRDTLGRKEDESPLFIMPNHAVFSVAR 469
Query: 380 KAPANRTDVYTTI 392
P+N+ ++ I
Sbjct: 470 DMPSNKVGLFNAI 482
>gi|378728924|gb|EHY55383.1| exosome complex exonuclease Rrp6 [Exophiala dermatitidis
NIH/UT8656]
Length = 820
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 176/381 (46%), Gaps = 45/381 (11%)
Query: 29 RRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS------------ 76
+R K + PQ S + KPQ F+R + + P+K K+K +
Sbjct: 125 KRLKTGKGPQ-SWSSEVTEKPQQFFERQVDNAETKPWKPLLKQKPHATVPLEESIGDEDT 183
Query: 77 ---HPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAV 133
HPY EI P + ++++T+ + ++ L A+
Sbjct: 184 GYKHPYLHEIEQYAYPPSVYQTSPPIPFAPPEQSEPIFIDTEEGVRDMLEELKGASEIAI 243
Query: 134 DTEQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDND 192
D E + RS++G L+QIST +D+++DT+ + + IL FAD + KVFHGS+ D
Sbjct: 244 DLEHNDQRSYVGMVCLMQISTRDKDWIIDTLKPWRENLQILNEVFADTKILKVFHGSNMD 303
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
++WLQRD +YVV LFDT AC L P K L +LL + K Q DWR RPLP
Sbjct: 304 IIWLQRDLGLYVVGLFDTYHACCALQFPGKGLKHLLHQFANFEAQKQYQTADWRVRPLPR 363
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE 312
E++ YA++D H+LL I L L ++ N D+ +FVL S++ LQ Y +
Sbjct: 364 ELIDYARSDTHFLLNIYDNLRNMLIERSTPN----DNLTDFVLTQSKKE---ALQTYERS 416
Query: 313 IESYPGEAAASSIF---------FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDE 363
+ Y E+ + R N Q GV R + WRD AR DE
Sbjct: 417 V--YDMESGRGPLGWLGLLLQRTVRFDNEQFGV----------FRAVHEWRDRKARELDE 464
Query: 364 SLRFVLSDQAIIALANKAPAN 384
L++VL ++ + +A P +
Sbjct: 465 GLQYVLPNRVLWQIAETMPTS 485
>gi|443693142|gb|ELT94573.1| hypothetical protein CAPTEDRAFT_228908 [Capitella teleta]
Length = 584
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 142/262 (54%), Gaps = 25/262 (9%)
Query: 467 ELKNQS----NKFVYKQNGVKVSRQVA-KKASRDLFVQKFSCKSPVYHNCRIYANDGRLL 521
ELK +S +K Q G K +++ +++ D+F+ K P Y NC + A DG+LL
Sbjct: 276 ELKRKSACAWSKEASPQKGKKNHKELKPRRSGEDVFLTK---SKPQYENCEMLAPDGQLL 332
Query: 522 CYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGN 581
C C KK EWY+ + LA+ V D P I L+FEP GRP E N +Y Q K NICV CG+
Sbjct: 333 CTCSTKKAEWYVEKGLAERVGDEPLTIRLIFEPSGRPVTEDN-YYTQKKDNICVVCGKSE 391
Query: 582 HYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFI 641
+R I+P YR +FP +K HR HD++L+C CH + KK+ + P+
Sbjct: 392 SLVRKNIVPHQYRKYFPAVMKDHRCHDLLLMCTSCHLTCDVHDTRLKKEFALRCNAPM-- 449
Query: 642 HKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRY 701
AE SA N + + +LR+AA ALL +G +P+ RR+EL ++V +
Sbjct: 450 -----DNDAEG----SAKFRNDDVLI---KLRSAARALLLNGEKIPAERRKELEQMVTSF 497
Query: 702 YGGREISQEDLERALLVGMSPR 723
YG IS E L+ A + ++PR
Sbjct: 498 YGLESISTEALKMA--IEINPR 517
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 863 GHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
G+ PHGK+VVD+++ +G+ F + WRQ F+ + P F+P+ W V H
Sbjct: 522 GYIPHGKKVVDHMMEN---EGLVAFERTWRQNFLRVMQPKFMPSLWSVDH 568
>gi|327281940|ref|XP_003225703.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Anolis carolinensis]
Length = 619
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 18/212 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CDRKK +WYL + + +LV +P + L FEP GRPE +
Sbjct: 349 KSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGELVSMDPFIVRLQFEPSGRPESK-V 407
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+N+CV CG+ Y+R I+P YR HFP Q+K H SHD++LLC CH +++
Sbjct: 408 DYYLTVKQNLCVVCGKTESYIRKNIVPHEYRKHFPLQMKDHSSHDVLLLCTACHAISNYY 467
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K+Q++ EFG P+ G + E + Q+R+AA ALL +
Sbjct: 468 DNHLKQQLAEEFGAPI---------------GCEEGVRLLEDPIRR-QVRSAARALL-NA 510
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+PS R+EEL +++ Y+ +IS E L+ A
Sbjct: 511 DNLPSARKEELLQVIKDYFESADISPEMLQEA 542
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 818 MNSTSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLR 877
+N+ + S K++ + + D E++ + + +++ + PHG +VV +
Sbjct: 508 LNADNLPSARKEELLQVIKDYFESADISPEMLQEAAGLETRIFNESYMPHGLKVV-HRFA 566
Query: 878 EYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
+ G + Q +RWRQ F++ + P +LP W V H
Sbjct: 567 KGGLLSLMQLERRWRQHFLDVMQPKYLPEQWSVDH 601
>gi|209881893|ref|XP_002142384.1| exosome component 10 [Cryptosporidium muris RN66]
gi|209557990|gb|EEA08035.1| exosome component 10, putative [Cryptosporidium muris RN66]
Length = 1029
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 1/155 (0%)
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHG 188
F A+D E HS+++F GF LIQ+ST DY++D L +E+S L +P + K+FHG
Sbjct: 399 FVLAIDLEHHSMQTFRGFVCLIQMSTRTCDYIIDPFPLFEELSRLNELTTNPRILKLFHG 458
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVATNKFLQREDWRQ 247
SD D++WLQRDF +YVVN+FDT +A VL+ P SL LL YC V NK Q DWR+
Sbjct: 459 SDYDIIWLQRDFSVYVVNMFDTGQAARVLNTPGGYSLGNLLNLYCSVEANKQYQLSDWRE 518
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNE 282
RPLP +++YA++D HYL YI + +L GN+
Sbjct: 519 RPLPQHLIEYARSDTHYLPYIYDIMKNQLLLLGNK 553
>gi|400601943|gb|EJP69568.1| 3'-5' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 802
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 191/415 (46%), Gaps = 39/415 (9%)
Query: 37 PQYSCYLQSEPKPQHNFKRVLADNSYS--PFKHA----NKEKSSG--SHPYELEITALLE 88
PQ + LQ + P +K +L ++ P + + E S HPYE EI L+
Sbjct: 142 PQVTFELQPDNFPTGPWKPILTKKPHAIVPLEESLITFTDENGSTQYKHPYEPEI---LQ 198
Query: 89 NPRPEFDFS---NVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLG 145
P+ F + + + WV+T + E+ L K A+D E H R++ G
Sbjct: 199 MAYPDSIFKVAKPIPWQPVETTTAKWVDTYEGVLEMLQELKKSKELAIDLEHHDFRTYTG 258
Query: 146 FTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV 204
+L+QIST ++D++VDT+ ++ IL FADP + KVFHG+ D++WLQRD +YV
Sbjct: 259 LVSLMQISTRQQDWIVDTLQPWRHKLEILNEAFADPSIIKVFHGAYMDMVWLQRDLGLYV 318
Query: 205 VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
LFDT ACE L +SLA+LL + +K Q DWR RP+P EML YA++D HY
Sbjct: 319 NGLFDTFFACEQLGYSGRSLAFLLSKFADFDADKQYQLADWRIRPIPEEMLYYARSDTHY 378
Query: 265 LLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKE-IESYPGEAAAS 323
LL+I + +L N ++ D + A ++S + L + + GE
Sbjct: 379 LLHIYDQVRNDLVSSSNRSAPEQD----LIGRALQKSKDLSLSRHVHAGYQEENGEGPRG 434
Query: 324 SIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
+ L + S + + + + WRD AR DES FVL + + P
Sbjct: 435 WYNYLLKHSH---LSYDAAQFTMFKTIWKWRDDTARKEDESPNFVLGTNHLADICRANPP 491
Query: 384 NRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCNNVENLDDILL 438
D L S +P +P+ S ++++ +V +N LL
Sbjct: 492 ----------------DAKALHSLMPLTAPLARSRINEIWARVLEASQNPGPSLL 530
>gi|365985620|ref|XP_003669642.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
gi|343768411|emb|CCD24399.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
Length = 790
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 144/278 (51%), Gaps = 17/278 (6%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+WV+T L + L+ FAVD E H R++ G L+QIST +DY+VDT+ L
Sbjct: 235 IWVDTPESLQSMIKDLNNCTEFAVDLEHHDYRTYYGIVCLMQISTRTQDYIVDTLKLRSH 294
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+ L F +P + KV HG+ D++WLQRD +Y+V+LFDT A L P+ SLAYLLE
Sbjct: 295 LQPLNEPFTNPQITKVLHGAFMDIIWLQRDLGLYIVSLFDTFHASRALGFPKNSLAYLLE 354
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ T+K Q DWR RPL M YA++D H+LL I + +L Q G
Sbjct: 355 KFSNFKTSKKYQMADWRIRPLSKAMNSYARSDTHFLLNIFDQMRNKLVQDG--------- 405
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF----FRLLNGQGGVSSISSVTQD 345
K VL+ SR + Y K A S I ++ L Q +I +
Sbjct: 406 KLAGVLKESRNVAKRRFE-YVKYRPLITSSAVYSPIEKIDPWKTLMYQ---YNIPLAKEL 461
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
L++ L WRD +AR DES R+++ +Q +++L AP
Sbjct: 462 LLKELYQWRDKIARRDDESPRYIMPNQLLVSLVAYAPV 499
>gi|340379235|ref|XP_003388132.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Amphimedon queenslandica]
Length = 548
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 20/217 (9%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
+SP+Y+NC++ A DG LL D++K+EWYL+++L LV ++PP + LLFEP G+P+ +
Sbjct: 293 QSPLYYNCQLIAPDGTLLSTVDKRKVEWYLSKELGVLVSEDPPVLQLLFEPSGKPKKD-R 351
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
E+Y+ K+NICV CG + Y+R ++P YR FP ++K H SHD++LLCV CH+++
Sbjct: 352 EYYLTEKENICVVCGRKDSYIRKNVVPHEYRKFFPPKMKEHLSHDVLLLCVTCHQLSTHH 411
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K+QI+ E+ PL AS F ++LR+ A AL H
Sbjct: 412 DSIIKQQIALEYSAPL-----------------EASTQKFHEDPEKVKLRSLARALKGHK 454
Query: 684 PTMPSNRREELRRIVMRYYGGR--EISQEDLERALLV 718
T+P RRE++ + +++ E++ + +E L +
Sbjct: 455 ETLPKKRREDITETLAKHFNCEKDEVTDDMIEELLKI 491
>gi|302846316|ref|XP_002954695.1| hypothetical protein VOLCADRAFT_106481 [Volvox carteri f.
nagariensis]
gi|300260114|gb|EFJ44336.1| hypothetical protein VOLCADRAFT_106481 [Volvox carteri f.
nagariensis]
Length = 1044
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 99/154 (64%), Gaps = 21/154 (13%)
Query: 488 VAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPA 547
A + R ++KFS K+ VY NCR+ +++G+LLC+CD +KL WYL + LA V ++PP
Sbjct: 726 AAARERRSWLIEKFSAKTQVYQNCRMLSHEGQLLCFCDSRKLRWYLNKGLAVQVCEDPPT 785
Query: 548 IMLLFEPK-------------------GRPEDEG--NEFYIQSKKNICVSCGEGNHYLRY 586
I LLFE + G E EG ++FY QSK N CV CG +HYLRY
Sbjct: 786 IQLLFEHQNTDQKLGEQLGGHRATGREGVREGEGGTDDFYTQSKSNRCVGCGCSSHYLRY 845
Query: 587 RIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVA 620
R++P+CYR H P LKSHRSHD+VLLC+DCHE+A
Sbjct: 846 RVLPACYRRHMPSALKSHRSHDVVLLCIDCHELA 879
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 62/136 (45%), Gaps = 30/136 (22%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED------------ 158
WV + QL L L +E +DTE L + G LIQ+S +
Sbjct: 203 WVSSPKQLYWLGQRLRQERQIGLDTEASPLLCYHGRVCLIQLSVWDDTASPCDGGDDGGS 262
Query: 159 -----------------YLVDTIALHDEI-SILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
+LVD +AL + + L ADP V KV HG NDV+WLQRDF
Sbjct: 263 SGCSSGSGGSGGGGGHVWLVDALALRGHVGAALGGLMADPRVVKVLHGGGNDVVWLQRDF 322
Query: 201 HIYVVNLFDTAKACEV 216
+Y+VN+FDT KA +
Sbjct: 323 RVYLVNVFDTEKASQA 338
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 215 EVLSKPQKSLAYLLETYCGV---ATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKC 271
+VL ++LA LL G+ A QR DWR+RPLP +L+YA D YL Y+A
Sbjct: 399 KVLGYENRALASLLSRIVGLDVGAEKAAGQRADWRRRPLPPALLRYAAADVAYLPYLADV 458
Query: 272 LVAELKQQG 280
L EL G
Sbjct: 459 LRRELAALG 467
>gi|407923871|gb|EKG16934.1| hypothetical protein MPH_05915 [Macrophomina phaseolina MS6]
Length = 817
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 174/385 (45%), Gaps = 45/385 (11%)
Query: 44 QSEPKPQHNFKRVLADNSYSPFKHANKEKSSGS--------------------HPYELEI 83
Q PKPQ F+ V ++ P+K K + HPY+ EI
Sbjct: 134 QDLPKPQVLFEHVPKNDETGPWKPLITSKPHATVPLEQSLITYTDETGIQHYQHPYQKEI 193
Query: 84 --------TALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDT 135
+P P F S + +V+T L+E+ L A+D
Sbjct: 194 EDYQYPSSVYTKADPIPYLPF--------ESTTATFVDTPEALDEMLAELKSAKEIAIDL 245
Query: 136 EQHSLRSFLGFTALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVM 194
E H R+++G L+QIST +D++VDT+ + L F DP + KV HG+ D +
Sbjct: 246 EHHDTRTYIGIVCLMQISTRNKDWIVDTLKPWRRRLQALNEVFTDPHILKVLHGAYMDAI 305
Query: 195 WLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEM 254
WLQRD +Y+V LFDT A L SLA+LL+ + K Q DWR RPLP E+
Sbjct: 306 WLQRDLGLYLVGLFDTHHAARALGYSGGSLAFLLQKFIHFNAQKQYQTADWRMRPLPQEL 365
Query: 255 LQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIE 314
YA++D H+LLYI + EL + S D + + VL +S LQ Y I
Sbjct: 366 FDYARSDTHFLLYIYDNMRNELV----DKSSFDDPEQDRVLRVLEKSKETALQTYENPIY 421
Query: 315 SYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAI 374
E + +++ L + + + + + WRD +AR DES +V+++ A+
Sbjct: 422 DA-KEGSGPMGWYKALYRNPNAFNKEQFS--VFKAVHQWRDTVARQEDESTHYVMANHAL 478
Query: 375 IALANKAPANRTDVYTTIAQADSDV 399
++A P ++ ++ +AQ S +
Sbjct: 479 FSVARSIPLDKAALF-NVAQPISPI 502
>gi|156083893|ref|XP_001609430.1| exosome component 10 [Babesia bovis T2Bo]
gi|154796681|gb|EDO05862.1| exosome component 10, putative [Babesia bovis]
Length = 879
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V+T +L + L K A+D E HS +S+ GF L+QI+ +D+++D ++ DE+
Sbjct: 319 VQTLEELESMITLLKKCSIVAIDVEHHSTQSYRGFVCLVQITGADDDWVIDPFSIFDEMW 378
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLET 230
L DP + KV HG+++D++WLQRDF +YVVNLFDT KA +VL SL+ L+
Sbjct: 379 RLNDVTTDPRILKVMHGAESDILWLQRDFGVYVVNLFDTLKAADVLCLSCGHSLSSLVRH 438
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL--LYIA---KCLVAELKQQGNENSY 285
+ G+ +K Q DWR RP+P +ML YA D HYL LY A L +LK
Sbjct: 439 FLGIHLDKSYQLADWRIRPIPRDMLTYATADTHYLLDLYSALKNTALEQDLKYNIPGMVG 498
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
C D+ ++ AS++ VCL+ Y + + A F L + S + S++ +
Sbjct: 499 CFDNHIWRIMLASKK---VCLRQYRDPVFNEIPRA-----FQALRKNRQCPSKVDSLSLN 550
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT 386
++ L ++R+ ARV DES F+ D A + +A A + T
Sbjct: 551 MMLNLISFRNYAARVLDESDSFLFPDYAAVIVAMAADSKNT 591
>gi|410962527|ref|XP_003987820.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2 [Felis catus]
Length = 621
Score = 159 bits (403), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
KN+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 KNKKSKMDGVMPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH V++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAVSNYYDNHLKQQLAREFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P+ R+EEL R + +Y I+
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPARRKEELLRALREFYDTDTIT 537
Query: 709 QEDLERA 715
E L+ A
Sbjct: 538 DEMLQEA 544
>gi|171679581|ref|XP_001904737.1| hypothetical protein [Podospora anserina S mat+]
gi|170939416|emb|CAP64644.1| unnamed protein product [Podospora anserina S mat+]
Length = 628
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 138/260 (53%), Gaps = 14/260 (5%)
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIA-LHDEISILQPFFADPGVCKVFHGSDNDVMW 195
H R++ G +L+QIST ++D++VDT+ + +L FADPG+ KVFHG+ DV+W
Sbjct: 36 HHDFRTYTGLLSLMQISTREKDWIVDTLVPWRHRLEVLNEVFADPGIVKVFHGAFMDVVW 95
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQRD +YVV LFDT A VL SLA+LL+ + G +K Q DWR RPLPAEML
Sbjct: 96 LQRDLGVYVVGLFDTHHASTVLGYGGGSLAFLLKKFVGFEADKRWQLADWRIRPLPAEML 155
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK-FNFVLEASRRSNTVCLQVYTKEIE 314
YA+ D HYLLY+ + +L ++ PD K V+ S+++ + + E
Sbjct: 156 YYARADTHYLLYVYDMIRNDLAAAA--HTVHPDGKPIERVIAKSKKTALSRYENPAFDEE 213
Query: 315 SYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV--RRLCAWRDLMARVHDESLRFVLSDQ 372
+ G+ + R SS ++ R L WRD AR DES FV+ +
Sbjct: 214 TGLGDRGWYNYLAR--------SSYVYNKEEFAVFRALWNWRDKTAREEDESTGFVMKEH 265
Query: 373 AIIALANKAPANRTDVYTTI 392
+ + P+++ +++ +
Sbjct: 266 VMAEIVRVMPSDKKALWSLL 285
>gi|348573292|ref|XP_003472425.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Cavia porcellus]
Length = 619
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 30/241 (12%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC ++A DG+ LC CDRKK +WYL + + +L
Sbjct: 326 GAHQGRDPRKNKRKPLGVGYSTRKSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGEL 385
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V ++P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +IP YR HFP +
Sbjct: 386 VSEDPFVVKLQFEPAGRPESPGD-YYLMVKENVCVVCGKTDSYIRKNVIPHEYRKHFPIE 444
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF PL
Sbjct: 445 MKDHNSHDVLLLCTSCHAISNYYDNYLKQQLAKEFQAPL--------------------- 483
Query: 661 TNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
E G+ L Q+R+ A ALL + ++P+ R+EEL + + +Y I+ E L+
Sbjct: 484 -GSEEGLRLLEDPERRQVRSGARALL-NAESLPAYRKEELLQALREFYSTDAITDEMLQE 541
Query: 715 A 715
A
Sbjct: 542 A 542
>gi|291406467|ref|XP_002719588.1| PREDICTED: exonuclease 3'-5' domain containing 2 isoform 2
[Oryctolagus cuniculus]
Length = 620
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 30/241 (12%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G + R + + L V + KSP+Y NC ++A DG+ LC CDR+K +WYL + + +L
Sbjct: 327 GSQQGRDPRRHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLHKGIGEL 386
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +IP YR HFP +
Sbjct: 387 VSEEPFVVRLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIE 445
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 446 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI--------------------- 484
Query: 661 TNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
E G+ L Q+R+ A ALL + ++P++R+EEL R + +Y I++E L+
Sbjct: 485 -GSEEGLRLLEDPERRQVRSGARALL-NAESLPAHRKEELLRALREFYNTDTITEEMLQE 542
Query: 715 A 715
A
Sbjct: 543 A 543
>gi|297695392|ref|XP_002824927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Pongo abelii]
gi|297695394|ref|XP_002824928.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pongo abelii]
gi|297695396|ref|XP_002824929.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Pongo abelii]
gi|395746023|ref|XP_003778376.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Pongo
abelii]
Length = 621
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNADTVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEILQEA 544
>gi|291406465|ref|XP_002719587.1| PREDICTED: exonuclease 3'-5' domain containing 2 isoform 1
[Oryctolagus cuniculus]
Length = 643
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 133/235 (56%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G + R + + L V + KSP+Y NC ++A DG+ LC CDR+K +WYL + + +L
Sbjct: 350 GSQQGRDPRRHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLHKGIGEL 409
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +IP YR HFP +
Sbjct: 410 VSEEPFVVRLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIE 468
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 469 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI---------------GSEEGL 513
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E Q+R+ A ALL + ++P++R+EEL R + +Y I++E L+ A
Sbjct: 514 RLLE-DPERRQVRSGARALL-NAESLPAHRKEELLRALREFYNTDTITEEMLQEA 566
>gi|385304629|gb|EIF48639.1| putative nuclear exosome component rrp6p [Dekkera bruxellensis
AWRI1499]
Length = 607
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 164/340 (48%), Gaps = 30/340 (8%)
Query: 77 HPYELEITALLENPRPEFDFSNVD-----LDLQRSDSFVWVETKSQLNELANALSKEFFF 131
+PYE EI + P++ FS ++ + + S WV+ QL L + L K
Sbjct: 161 NPYEYEI---MNAKYPDWIFSPIEHPYTSVPWKSSPQPGWVDNVEQLKALLSELEKCKVI 217
Query: 132 AVDTEQHSLRSFLGFTALIQISTEK-EDYLVDTIA--LHDEISILQPFFADPGVCKVFHG 188
VD E H R++ G T+L+QIST+ +DY+VD ++ L +S+L F +P + KVFHG
Sbjct: 218 GVDLEHHDYRTYHGLTSLMQISTDTGKDYIVDPLSAQLRPHLSLLNIVFTNPDIIKVFHG 277
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+ D+MWLQRD +YVV+LFDT A + L+ + SLA+LLE Y T+K Q DWR R
Sbjct: 278 AFMDMMWLQRDLGLYVVSLFDTYWAAKELTLGKYSLAFLLEKYIHFRTSKKWQLADWRIR 337
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAEL-------KQQGNENSYCPDDKFNFVLEASRRS 301
PL EM YA+ D H+L+ + + EL K+ + + +F + R +
Sbjct: 338 PLGPEMRNYAKADTHFLIELFGKIQXELIXKPGAMKRVLYHSRKVSNRRFEYATYKPRNA 397
Query: 302 NTVCLQVYTKEIESYPGEAAASSIF--------FRLLNGQGGVSSISSVTQDLVRRLCAW 353
+ + P A F L+ G I +V L W
Sbjct: 398 TAFGVVSTGGSVPLTPEFQDALFSFDTSRELPWLSLMRSNG----IPDTKGPVVEALYKW 453
Query: 354 RDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIA 393
RD AR DES+R+++SD + +LAN D T A
Sbjct: 454 RDNKARKEDESIRYIMSDFVLTSLANSFSPGAIDQITEAA 493
>gi|348510943|ref|XP_003443004.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oreochromis niloticus]
Length = 640
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 20/215 (9%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CD+KK +WYL + + L + P + LLFEP GRP D
Sbjct: 366 KSPLYDNCFLHAPDGQPLCTCDKKKAKWYLDKGIGVLESEEPFIVRLLFEPSGRP-DSQQ 424
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ +K+N+CV CG+ + Y+R I+P YR HFP ++K H SHDI+LLC CH ++
Sbjct: 425 DYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPTEMKDHNSHDILLLCTSCHAASNVH 484
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K+Q++ EF P G + FE ++R+AA ALL G
Sbjct: 485 DSFLKQQLAEEFSAP---------------QGCEEGVRIFEDS-DRRKVRSAARALLTAG 528
Query: 684 PTMPSNRREELRRIVMRYYG---GREISQEDLERA 715
+P RREEL+ ++ + E+++E L++A
Sbjct: 529 EGLPEQRREELQALIKSFLNLNDEEEVTEEALQQA 563
>gi|301763301|ref|XP_002917070.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Ailuropoda melanoleuca]
gi|281349384|gb|EFB24968.1| hypothetical protein PANDA_005241 [Ailuropoda melanoleuca]
Length = 622
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 317 RNKKSKMDGTMPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 376
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 377 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 435
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 436 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI--------- 486
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 487 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALQEFYNTDTVT 538
Query: 709 QEDLERA 715
E L+ A
Sbjct: 539 DEMLQEA 545
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 818 MNSTSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLR 877
+N+ S + K++ + + + +V + + + +++S + PHG +VV
Sbjct: 511 LNAESLPAHRKEELLQALQEFYNTDTVTDEMLQEAASLETRISNENYIPHGLKVVQC--- 567
Query: 878 EYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+ + G+R Q RWRQ F++++ P LP W V H
Sbjct: 568 -HSQGGLRSLMQLESRWRQHFLDSMQPRHLPQQWSVDH 604
>gi|332228976|ref|XP_003263664.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|332228978|ref|XP_003263665.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Nomascus leucogenys]
gi|332228980|ref|XP_003263666.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Nomascus leucogenys]
gi|332228982|ref|XP_003263667.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Nomascus leucogenys]
Length = 621
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNSDMVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|350587033|ref|XP_001925126.4| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Sus
scrofa]
Length = 624
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 319 RNKKSKTDGAMPGTHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 378
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV ++P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 379 AQWYLDKGIGELVSEDPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 437
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 438 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYHDNHLKQQLAREFQAPI--------- 488
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL ++P++R+EEL + + +Y ++
Sbjct: 489 ------GSEEGLRLLE-DPERRQVRSGARALL-TAESLPAHRKEELLQALREFYHTHSVT 540
Query: 709 QEDLERA 715
++ L+ A
Sbjct: 541 EQMLQEA 547
>gi|297695398|ref|XP_002824930.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pongo abelii]
gi|297695400|ref|XP_002824931.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Pongo abelii]
Length = 496
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNADTVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEILQEA 419
>gi|440897356|gb|ELR49067.1| Exonuclease 3'-5' domain-containing protein 2 [Bos grunniens mutus]
Length = 627
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 139/253 (54%), Gaps = 30/253 (11%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G + R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 322 RNKKSKADGTMPGNQQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 381
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 382 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 440
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 441 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI--------- 491
Query: 649 KAEARPGFSASITNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYY 702
E G+ L Q+R+ A ALL + ++P++R+EEL + + +Y
Sbjct: 492 -------------GSEEGLRLLEDPERRQVRSGARALL-NAESLPAHRKEELLQGLREFY 537
Query: 703 GGREISQEDLERA 715
+++E L+ A
Sbjct: 538 RTDRVTEEMLQEA 550
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S + PHG +VV + + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 555 TRISNENYIPHGLKVV----QRHTQGGLRSLMQLESRWRQHFLDSMQPRHLPQQWSVDH 609
>gi|194380670|dbj|BAG58488.1| unnamed protein product [Homo sapiens]
Length = 621
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTHRKEELLQALREFYNTDVVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|432107115|gb|ELK32538.1| Exonuclease 3'-5' domain-containing protein 2 [Myotis davidii]
Length = 516
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 30/252 (11%)
Query: 470 NQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKL 529
N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 212 NKKSKVDVTVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKA 271
Query: 530 EWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRII 589
+WYL + + +LV + P + L FEP GRPE G ++Y+ K+N+CV CG+ + Y+R ++
Sbjct: 272 QWYLDKGIGELVSEEPFVVKLQFEPAGRPESPG-DYYLMVKENLCVVCGKKDSYIRKNVV 330
Query: 590 PSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRK 649
P YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 331 PHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------- 380
Query: 650 AEARPGFSASITNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYYG 703
E GV L Q+R+ A ALL + ++P++R+EEL + + +Y
Sbjct: 381 ------------GSEEGVRLLEDPERRQMRSGARALL-NAESLPAHRKEELLQALREFYS 427
Query: 704 GREISQEDLERA 715
++ E L+ A
Sbjct: 428 TDTVTDEMLQEA 439
>gi|410252096|gb|JAA14015.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
Length = 621
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDMVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|301129155|ref|NP_001180289.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129157|ref|NP_001180290.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129159|ref|NP_001180291.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129161|ref|NP_001180292.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|410516875|sp|Q9NVH0.2|EXD2_HUMAN RecName: Full=Exonuclease 3'-5' domain-containing protein 2;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 2
gi|119601391|gb|EAW80985.1| exonuclease 3'-5' domain-like 2, isoform CRA_b [Homo sapiens]
Length = 621
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P+ R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTQRKEELLQALREFYNTDVVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|403264513|ref|XP_003924522.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 621
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDMVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|426377284|ref|XP_004055398.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|426377286|ref|XP_004055399.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Gorilla gorilla gorilla]
gi|426377288|ref|XP_004055400.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Gorilla gorilla gorilla]
gi|426377290|ref|XP_004055401.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Gorilla gorilla gorilla]
Length = 621
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDMVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|114653639|ref|XP_510030.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 8
[Pan troglodytes]
gi|332842572|ref|XP_001141128.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pan troglodytes]
gi|332842574|ref|XP_003314457.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Pan
troglodytes]
gi|410224142|gb|JAA09290.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
gi|410301904|gb|JAA29552.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
gi|410353307|gb|JAA43257.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
Length = 621
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDVVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|397507299|ref|XP_003824138.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Pan paniscus]
gi|397507301|ref|XP_003824139.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pan paniscus]
gi|397507303|ref|XP_003824140.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Pan paniscus]
gi|397507305|ref|XP_003824141.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pan paniscus]
Length = 621
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDVVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|296215361|ref|XP_002807292.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2 [Callithrix jacchus]
Length = 621
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNYQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDVVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
>gi|119601390|gb|EAW80984.1| exonuclease 3'-5' domain-like 2, isoform CRA_a [Homo sapiens]
Length = 607
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 302 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 361
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 362 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 420
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 421 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 471
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P+ R+EEL + + +Y ++
Sbjct: 472 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTQRKEELLQALREFYNTDVVT 523
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 524 EEMLQEA 530
>gi|426233582|ref|XP_004010795.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Ovis
aries]
Length = 622
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 317 RNKKSKADGTMPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 376
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 377 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 435
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 436 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI--------- 486
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 487 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYRTDTVT 538
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 539 EEMLQEA 545
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S + PHG +VV + + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 550 TRISNENYVPHGLKVV----QRHTQGGLRSLMQLESRWRQHFLDSMQPRHLPQQWSVDH 604
>gi|402876535|ref|XP_003902017.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Papio anubis]
gi|402876537|ref|XP_003902018.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Papio anubis]
gi|402876539|ref|XP_003902019.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Papio anubis]
gi|402876543|ref|XP_003902021.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Papio anubis]
Length = 620
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
K++ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 315 KHKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 374
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 375 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 433
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 434 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 484
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 485 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDTVT 536
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 537 EEMLQEA 543
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S + PHG +VV Y + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 548 TRISNENYVPHGLKVVQY----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDH 602
>gi|386782259|ref|NP_001247993.1| exonuclease 3'-5' domain-containing protein 2 [Macaca mulatta]
gi|380814300|gb|AFE79024.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Macaca
mulatta]
gi|384947988|gb|AFI37599.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Macaca
mulatta]
Length = 620
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
K++ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 315 KHKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 374
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 375 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 433
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 434 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 484
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 485 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDTVT 536
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 537 EEMLQEA 543
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S + PHG +VV Y + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 548 TRISNENYVPHGLKVVQY----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDH 602
>gi|355693387|gb|EHH27990.1| hypothetical protein EGK_18321 [Macaca mulatta]
Length = 540
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 138/253 (54%), Gaps = 30/253 (11%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
K++ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 284 KHKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 343
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 344 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 402
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 403 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 453
Query: 649 KAEARPGFSASITNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYY 702
E G+ L Q+R+ A ALL + ++P++R+EEL + + +Y
Sbjct: 454 -------------GSEEGLRLLEDPERRQVRSGARALL-NAESLPAHRKEELLQALREFY 499
Query: 703 GGREISQEDLERA 715
+++E L+ A
Sbjct: 500 NTDTVTEEMLQEA 512
>gi|332228984|ref|XP_003263668.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Nomascus leucogenys]
gi|332228986|ref|XP_003263669.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Nomascus leucogenys]
gi|332228988|ref|XP_003263670.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 7
[Nomascus leucogenys]
Length = 496
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G ++Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPG-DYYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNSDMVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|224051280|ref|XP_002200511.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Taeniopygia guttata]
Length = 621
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 138/249 (55%), Gaps = 22/249 (8%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
KN+ + + +G + R ++ + L V + KSP+Y NC ++A DG+ LC CDRKK
Sbjct: 316 KNRKSWVNGQPSGNQQMRDPRRQKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRKK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV +P + L FEP GRPE + ++Y+ K+N+CV CG+ Y+R +
Sbjct: 376 AQWYLDKGIGELVSTDPFVVKLRFEPSGRPESQ-VDYYLTVKENLCVVCGKRESYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
+P YR HFP Q+K H SHD++LLC CH +++ K+Q++ EFG P+
Sbjct: 435 VPHEYRRHFPIQMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAQEFGAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPL--QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGRE 706
G + E PL Q+R+ A ALL + ++P RR EL + + +Y
Sbjct: 486 ------GSEEGVRLLE---DPLRRQVRSGARALL-NADSLPDPRRAELLQSIKDFYNTDT 535
Query: 707 ISQEDLERA 715
++ E L+ A
Sbjct: 536 VTPEMLQAA 544
>gi|158258563|dbj|BAF85252.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G ++Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPG-DYYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTHRKEELLQALREFYNTDVVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|403264515|ref|XP_003924523.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 496
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDMVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|355778692|gb|EHH63728.1| hypothetical protein EGM_16753 [Macaca fascicularis]
Length = 608
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
K++ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 284 KHKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 343
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 344 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 402
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 403 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 453
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 454 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDTVT 505
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 506 EEMLQEA 512
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
PHG +VV Y + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 545 PHGLKVVQY----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDH 590
>gi|426377292|ref|XP_004055402.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Gorilla gorilla gorilla]
gi|426377294|ref|XP_004055403.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Gorilla gorilla gorilla]
gi|426377296|ref|XP_004055404.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 7
[Gorilla gorilla gorilla]
Length = 496
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDMVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|50949589|emb|CAD39094.2| hypothetical protein [Homo sapiens]
Length = 496
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P+ R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTQRKEELLQALREFYNTDVVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|76628167|ref|XP_587937.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Bos
taurus]
gi|297479852|ref|XP_002691029.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Bos
taurus]
gi|296483016|tpg|DAA25131.1| TPA: exonuclease 3'-5' domain containing 2 [Bos taurus]
Length = 628
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 138/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G + R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 323 RNKKSKADGMMPGNQQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 382
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 383 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 441
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 442 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDIHLKQQLAREFQAPI--------- 492
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 493 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQGLREFYRTDRVT 544
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 545 EEMLQEA 551
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S + PHG +VV + + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 556 TRISNENYIPHGLKVV----QRHTQGGLRSLMQLESRWRQHFLDSMQPRHLPQQWSVDH 610
>gi|397507307|ref|XP_003824142.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Pan paniscus]
gi|397507309|ref|XP_003824143.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Pan paniscus]
Length = 496
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDVVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|114653649|ref|XP_001141295.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pan troglodytes]
Length = 496
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDVVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|190689663|gb|ACE86606.1| exonuclease 3'-5' domain-like 2 protein [synthetic construct]
gi|190691025|gb|ACE87287.1| exonuclease 3'-5' domain-like 2 protein [synthetic construct]
Length = 621
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 316 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 376 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD+ LLC CH +++ K+Q++ EF P+
Sbjct: 435 IPHEYRKHFPIEMKDHNSHDVPLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 486 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTHRKEELLQALREFYNTDVVT 537
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 538 EEMLQEA 544
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S H PHG +VV + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 549 TRISNENHVPHGLKVVQC----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDH 603
>gi|8922631|ref|NP_060669.1| exonuclease 3'-5' domain-containing protein 2 isoform 2 [Homo
sapiens]
gi|7022954|dbj|BAA91781.1| unnamed protein product [Homo sapiens]
gi|12805017|gb|AAH01962.1| Exonuclease 3'-5' domain containing 2 [Homo sapiens]
Length = 496
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P+ R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTQRKEELLQALREFYNTDVVT 412
Query: 709 QEDLERA 715
+E L+ A
Sbjct: 413 EEMLQEA 419
>gi|354472198|ref|XP_003498327.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Cricetulus griseus]
Length = 620
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 327 GSNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 386
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 387 VSKEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 445
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 446 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 490
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y +++E L+ A
Sbjct: 491 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDTVTEEMLQEA 543
>gi|149737203|ref|XP_001500310.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Equus caballus]
Length = 625
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 320 RNKKSKIDGAMPGGHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 379
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 380 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 438
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 439 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI--------- 489
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R++EL + + +Y ++
Sbjct: 490 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKQELLQALREFYNTDTVT 541
Query: 709 QEDLERA 715
E L+ A
Sbjct: 542 DEMLQEA 548
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S G+ PHG +VV + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 553 TRISNEGYVPHGLKVVQC----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDH 607
>gi|73963367|ref|XP_547872.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 623
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 136/247 (55%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R + + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 318 RNKKSKMDGTMLGNHQGRDPRRHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 377
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 378 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 436
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 437 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAREFQAPI--------- 487
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 488 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDTVT 539
Query: 709 QEDLERA 715
E L+ A
Sbjct: 540 DEMLQEA 546
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 818 MNSTSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLR 877
+N+ S + K++ + + + +V + + + +++S + PHG +VV
Sbjct: 512 LNAESLPAHRKEELLQALREFYNTDTVTDEMLQEAASLETRISNENYVPHGLKVVQC--- 568
Query: 878 EYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+ + G+R Q RWRQ F++++ P +LP W V H
Sbjct: 569 -HSQGGLRSLMQLESRWRQHFLDSMQPRYLPQQWSVDH 605
>gi|344235751|gb|EGV91854.1| Exonuclease 3'-5' domain-containing protein 2 [Cricetulus griseus]
Length = 496
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 203 GSNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 262
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G ++Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 263 VSKEPFVVRLQFEPAGRPESPG-DYYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 321
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 322 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 366
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y +++E L+ A
Sbjct: 367 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDTVTEEMLQEA 419
>gi|347966136|ref|XP_321572.5| AGAP001549-PA [Anopheles gambiae str. PEST]
gi|333470194|gb|EAA01810.5| AGAP001549-PA [Anopheles gambiae str. PEST]
Length = 824
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 15/194 (7%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG LLC CDR+K EWY+ R+L LV +NP + L FEP GR DE ++
Sbjct: 289 PLYHNCLMQAPDGELLCTCDRRKAEWYVQRELGDLVCENPYTVRLRFEPAGRAVDEAGKY 348
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y+Q+K+NICV CG + + R I+P YR HFP +K H SHD++LLC DCH+ + E
Sbjct: 349 YLQAKENICVVCGANSSFNRKNIVPRDYRKHFPVVMKEHVSHDVLLLCADCHQRSSMYDE 408
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ +++++ PL PG S ++R AA ALL+
Sbjct: 409 RLRQELAELCNAPL--------------PGQKNGTKEIRLE-SMAEIRKAARALLNFAAK 453
Query: 686 MPSNRREELRRIVM 699
+P R++EL + ++
Sbjct: 454 IPPERKQELEQRLL 467
>gi|402876541|ref|XP_003902020.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Papio anubis]
gi|402876545|ref|XP_003902022.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Papio anubis]
gi|402876547|ref|XP_003902023.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 7
[Papio anubis]
Length = 495
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC ++A DG+ LC CDR+K +WYL + + +L
Sbjct: 202 GNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLDKGIGEL 261
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +IP YR HFP +
Sbjct: 262 VSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIE 320
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 321 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 365
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E Q+R+ A ALL + ++P++R+EEL + + +Y +++E L+ A
Sbjct: 366 RLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDTVTEEMLQEA 418
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 857 SKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+++S + PHG +VV Y + + G+R Q RWRQ F++++ P LP W V H
Sbjct: 423 TRISNENYVPHGLKVVQY----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDH 477
>gi|157823431|ref|NP_001102185.1| exonuclease 3'-5' domain-containing protein 2 [Rattus norvegicus]
gi|149025011|gb|EDL81378.1| exonuclease 3''-5'' domain-like 2 (predicted) [Rattus norvegicus]
gi|183986019|gb|AAI66432.1| Exdl2 protein [Rattus norvegicus]
Length = 648
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 355 GSNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 414
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 415 VSKEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 473
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 474 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 518
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y +++E L+ A
Sbjct: 519 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDIVTEEMLQEA 571
>gi|260805242|ref|XP_002597496.1| hypothetical protein BRAFLDRAFT_156042 [Branchiostoma floridae]
gi|229282761|gb|EEN53508.1| hypothetical protein BRAFLDRAFT_156042 [Branchiostoma floridae]
Length = 505
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 111/205 (54%), Gaps = 16/205 (7%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
+SP YHNC++ A DG LL DRKK++WYL ++L +LV ++P + L FEP GRP + +
Sbjct: 245 RSPFYHNCQLLAPDGTLLSTIDRKKVQWYLQKELGELVSEDPLTVQLKFEPSGRPSSQDD 304
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K N+CV CG Y+R ++P YR HFP ++K H SHDI+LLC CH+
Sbjct: 305 QYYLSVKDNVCVVCGRTESYIRKNVVPHDYRRHFPREMKDHLSHDILLLCTVCHQQTGHH 364
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
+ + +I EF PL S F + + RTAA ALL
Sbjct: 365 DNRLRNEIVREFNAPL----------------GSEDNAKFLEDPARRKARTAAKALLRDD 408
Query: 684 PTMPSNRREELRRIVMRYYGGREIS 708
+P+ R+ EL V +Y E++
Sbjct: 409 NKIPAERKLELETHVKEFYSTEEVT 433
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
PH ++VV LL DG+ F +RWR+ F++++ P +LP W V H
Sbjct: 454 PHAEKVVRSLLER--RDGLMLFEKRWRRHFLDSMKPRYLPPLWSVDH 498
>gi|294865716|ref|XP_002764472.1| hypothetical protein Pmar_PMAR012804 [Perkinsus marinus ATCC 50983]
gi|239863939|gb|EEQ97189.1| hypothetical protein Pmar_PMAR012804 [Perkinsus marinus ATCC 50983]
Length = 703
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 119/214 (55%), Gaps = 20/214 (9%)
Query: 61 SYSPFKHANKEK-SSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLN 119
S P HA E+ + + E+ ++E P P+ +L +WV+T ++
Sbjct: 502 STDPLPHAYAEEIRTWQEMADAEVDGVVEAPSPQLPNKEAEL--------MWVDTVELVD 553
Query: 120 ELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA------LHDEISIL 173
E+ + L++ A+D E H+++S+ GFT LIQI+T K+DY+VD +A +HD
Sbjct: 554 EMLDELAEAREVAIDLEHHNMQSYRGFTCLIQIATRKKDYIVDVLAPGIMMKMHD----F 609
Query: 174 QPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLETYC 232
+DPG+ KV HG+D DV WLQRD Y+ N+FDT +A VL SL LL+ YC
Sbjct: 610 NRITSDPGIVKVLHGADMDVQWLQRDLSAYLCNMFDTGQAARVLELGGGYSLKNLLDFYC 669
Query: 233 GVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
G +K Q DWRQRPL M QYA+ D HYLL
Sbjct: 670 GYKADKANQLADWRQRPLSERMKQYARDDVHYLL 703
>gi|71027523|ref|XP_763405.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350358|gb|EAN31122.1| hypothetical protein TP03_0385 [Theileria parva]
Length = 996
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 142/264 (53%), Gaps = 15/264 (5%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++ ++ N + + L ++D E H ++ GF L+Q+ST +E+Y++D + +++
Sbjct: 475 IDNEADFNSMLDKLKNIRVLSLDVEHHDTETYRGFICLVQLSTPEENYIIDPFKIFGKMN 534
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L DP + K+ HG+ NDV+WLQRDF+I+VVNLFDT +A +VL+ ++SLA L++ Y
Sbjct: 535 KLNRLTTDPKILKIMHGASNDVVWLQRDFNIFVVNLFDTREAAKVLNLAEQSLAKLIQKY 594
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
+ NK Q DW +RPL AEML YA D+HYL+ + L E+ +D
Sbjct: 595 FNIKLNKRFQLSDWSKRPLDAEMLDYACCDSHYLIPLYSALKDEI--------LSKEDGR 646
Query: 292 NFVLEASRRSNTVCLQVYT-KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
+++ CL+ Y + E Y + S + + + V+ +L+ L
Sbjct: 647 VKIIQVMNNGRETCLKQYVDRGPEIYKKFKSISK------RHKIRIPELDFVSYNLLLNL 700
Query: 351 CAWRDLMARVHDESLRFVLSDQAI 374
A+R+ +AR D+S + ++ D I
Sbjct: 701 IAFRNFLARKLDKSEKLIIRDYQI 724
>gi|237681098|ref|NP_598559.2| exonuclease 3'-5' domain-containing protein 2 [Mus musculus]
Length = 650
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 357 GNNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 416
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 417 VSKEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 475
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 476 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 520
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y I++E L A
Sbjct: 521 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDIITEEMLHEA 573
>gi|148670716|gb|EDL02663.1| exonuclease 3''-5'' domain-like 2, isoform CRA_a [Mus musculus]
Length = 652
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 359 GNNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 418
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 419 VSKEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 477
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 478 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 522
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y I++E L A
Sbjct: 523 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDIITEEMLHEA 575
>gi|74216614|dbj|BAE37741.1| unnamed protein product [Mus musculus]
Length = 650
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 357 GNNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLRAPDGQPLCTCDRRKAQWYLDKGIGEL 416
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 417 VSKEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 475
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 476 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 520
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y I++E L A
Sbjct: 521 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDIITEEMLHEA 573
>gi|193786324|dbj|BAG51607.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 191 RNKKSKMDGMVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 250
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 251 AQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 309
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 310 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 360
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P+ R+EEL + + +Y ++
Sbjct: 361 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPTQRKEELLQALREFYNTDVVT 412
Query: 709 QEDLERA 715
+E + A
Sbjct: 413 EEMFQEA 419
>gi|74147230|dbj|BAE27515.1| unnamed protein product [Mus musculus]
Length = 650
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 357 GNNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 416
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 417 VSKEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 475
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 476 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 520
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y I++E L A
Sbjct: 521 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDIITEEMLHEA 573
>gi|417403409|gb|JAA48511.1| Putative exonuclease 3'-5' domain-containing protein 2 [Desmodus
rotundus]
Length = 623
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 135/253 (53%), Gaps = 30/253 (11%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 318 RNKKSKTDVTVPGNHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 377
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + +LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 378 AQWYLDKGIGELVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNV 436
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 437 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI--------- 487
Query: 649 KAEARPGFSASITNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYY 702
E G+ L Q+R+ A ALL + ++P+ R+EEL + +Y
Sbjct: 488 -------------GSEEGLRLLEDPERRQMRSGARALL-NAESLPARRKEELLQAFREFY 533
Query: 703 GGREISQEDLERA 715
++ + L+ A
Sbjct: 534 NTDTVTDKMLQEA 546
>gi|344273945|ref|XP_003408779.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Loxodonta africana]
Length = 619
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 135/247 (54%), Gaps = 18/247 (7%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+N+ +K G R K + L V + KSP+Y NC ++A DG+ LC CDR+K
Sbjct: 314 RNKKSKMDGTVPGSHQGRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRK 373
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +
Sbjct: 374 AQWYLDKGIGVLVSEEPFVVKLQFEPAGRPESPGD-YYLMVKENLCVVCGKRDSYIRKNV 432
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
IP YR HFP ++K H SHD++LLC CH +++ K+Q++ E+ P+
Sbjct: 433 IPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEYRAPI--------- 483
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
G + E Q+R+ A ALL + ++P++R+EEL + + +Y ++
Sbjct: 484 ------GSEEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDTVT 535
Query: 709 QEDLERA 715
E L+ A
Sbjct: 536 DEMLQEA 542
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 818 MNSTSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLR 877
+N+ S + K++ + + + +V + + + +++S + PHG +VV
Sbjct: 508 LNAESLPAHRKEELLQALREFYNTDTVTDEMLQEAASLETRISNENYVPHGLKVVQC--- 564
Query: 878 EYGEDGIRQFCQ---RWRQVFVEALHPHFLPAGWDVMH 912
+ + G+R Q RWRQ F++ + P LP W V H
Sbjct: 565 -HSQGGLRSLMQLESRWRQHFLDTMQPRHLPQQWSVDH 601
>gi|314122235|ref|NP_001186629.1| exonuclease 3'-5' domain-containing protein 2 [Gallus gallus]
Length = 621
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 136/249 (54%), Gaps = 22/249 (8%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
KN+ + +G + R ++ + L V + KSP+Y NC ++A DG+ LC CDRKK
Sbjct: 316 KNRRSVVNVHSSGSQQVRDPRRQKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRKK 375
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
+WYL + + LV +P + L FEP GRPE + ++Y+ K+N+CV CG+ Y+R I
Sbjct: 376 AQWYLDKGIGDLVSTDPFVVKLRFEPSGRPESD-VDYYLMVKENLCVVCGKRESYIRKNI 434
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
+P YR HFP Q+K H SHD++LLC CH +++ K+Q++ EFG P+
Sbjct: 435 VPHEYRRHFPIQMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAEEFGAPI--------- 485
Query: 649 KAEARPGFSASITNFEAGVSPL--QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGRE 706
G + E PL Q+R+ A ALL + ++P R+ EL + + ++
Sbjct: 486 ------GSEEGVRLLE---DPLRRQVRSGARALL-NADSLPDPRKAELLQGIKDFFNVEA 535
Query: 707 ISQEDLERA 715
++ E L+ A
Sbjct: 536 VTPEMLQEA 544
>gi|37999725|sp|Q8VEG4.1|EXD2_MOUSE RecName: Full=Exonuclease 3'-5' domain-containing protein 2;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 2
gi|17391198|gb|AAH18508.1| Exonuclease 3''-5'' domain-like 2 [Mus musculus]
gi|74189569|dbj|BAE36791.1| unnamed protein product [Mus musculus]
gi|74196573|dbj|BAE34403.1| unnamed protein product [Mus musculus]
gi|74198515|dbj|BAE39739.1| unnamed protein product [Mus musculus]
Length = 496
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC + A DG+ LC CDR+K +WYL + + +L
Sbjct: 203 GNNQGRDPRKHKRKPLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGEL 262
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V P + L FEP GRPE G ++Y+ K+N+CV CG+ + Y+R IIP YR HFP +
Sbjct: 263 VSKEPFVVRLQFEPAGRPESPG-DYYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPIE 321
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH +++ K+Q++ EF P+ G +
Sbjct: 322 MKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAPI---------------GSEEGL 366
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E + Q+R+ A ALL + ++P++R+EEL + +Y I++E L A
Sbjct: 367 RLLE-DLERRQVRSGARALL-NAESLPAHRKEELLHALREFYNTDIITEEMLHEA 419
>gi|118404126|ref|NP_001016454.2| exonuclease 3'-5' domain containing 2 [Xenopus (Silurana)
tropicalis]
gi|116284125|gb|AAI24062.1| hypothetical protein LOC549208 [Xenopus (Silurana) tropicalis]
Length = 612
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 18/212 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CDRKK +WYL + + LV P + L FEP GRPE
Sbjct: 342 KSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGDLVSTIPFVVKLRFEPSGRPESNA- 400
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+N+CV CG+ Y+R I+P YR HFP Q+K H SHD++LLC CH V++
Sbjct: 401 DYYLTVKENLCVVCGKRESYIRKNIVPHEYRRHFPVQMKDHNSHDVLLLCTSCHAVSNYY 460
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K++++ EF P+ G + E V Q+R+AA ALL +
Sbjct: 461 DSNLKQKLAEEFNAPI---------------GCEEGVRLLEDPVRR-QVRSAARALL-NA 503
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+P R+EEL + +Y +I++E ++ A
Sbjct: 504 AKLPECRKEELISEIRAFYNTEDITEEIMKEA 535
>gi|321465391|gb|EFX76392.1| hypothetical protein DAPPUDRAFT_55156 [Daphnia pulex]
Length = 181
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQR-----SDSFVWVETKSQLNELANALSKEFFF 131
HPYE E+ +P+ F V ++ R S + V+T L L +
Sbjct: 7 HPYEFELNKFTPHPK----FLTVQREVPRFKPVSSTPLIMVDTTEAFELLLRDLLSQMVI 62
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
VD E HS RS+ G T L+QIST+K DY+VDT+ L D + L F DP + K+F G+D+
Sbjct: 63 GVDLEHHSERSYRGITCLMQISTDKTDYIVDTLQLWDHLQPLNEVFCDPKIVKIFQGADS 122
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRDF IYVVNLFDT +A +L +KSL++LL+ YC V NK Q EDWR RPL
Sbjct: 123 DVIWLQRDFGIYVVNLFDTFQAATLLGFEKKSLSFLLQHYCQVHVNKKYQLEDWRIRPL 181
>gi|189217744|ref|NP_001121313.1| exonuclease 3'-5' domain containing 2 [Xenopus laevis]
gi|115528351|gb|AAI24972.1| LOC100158397 protein [Xenopus laevis]
Length = 499
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 18/231 (7%)
Query: 485 SRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDN 544
R K + L V + KSP+Y NC ++A DG+ LC CDRKK +WYL + + LV
Sbjct: 211 GRDPCKNKKKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGDLVSTI 270
Query: 545 PPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSH 604
P + L FEP GRPE + ++Y+ K+N+CV CG+ Y+R I+P YR HFP Q+K H
Sbjct: 271 PFIVKLRFEPSGRPESKA-DYYLTVKENLCVICGKKESYIRKNIVPHEYRRHFPVQMKDH 329
Query: 605 RSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFE 664
SHD++LLC CH V++ K +++ EF P+ G + E
Sbjct: 330 NSHDVLLLCTSCHAVSNYYDSSLKHKLAEEFNAPI---------------GCEEGVRTLE 374
Query: 665 AGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+ Q+R+AA ALL + +P R+EEL + +Y +++++ ++ A
Sbjct: 375 DPIR-RQVRSAARALL-NAAKLPECRKEELMSEIRAFYNIEDVTEDTIKEA 423
>gi|395849609|ref|XP_003797414.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Otolemur
garnettii]
Length = 625
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G R K + L V + KSP+Y NC ++A DG+ LC CDR+K +WYL + + +L
Sbjct: 331 GNHQGRDPRKHRRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLDKGIGEL 390
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
V + P + L FEP GRPE G+ +++ K+N+CV CG+ + Y+R +IP YR HFP +
Sbjct: 391 VSEEPFVVKLQFEPAGRPESPGD-YHLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIE 449
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
+K H SHD++LLC CH V++ K++++ EF P+ G +
Sbjct: 450 MKDHNSHDVLLLCTSCHAVSNYYDNHLKQRLAKEFQAPI---------------GSEEGL 494
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
E Q+R+ A ALL + ++P+ R+EEL + + +Y ++ E L RA
Sbjct: 495 RLLE-DPERRQVRSGARALL-NAESLPTRRKEELLQALREFYSTDAVTDEMLRRA 547
>gi|351542215|ref|NP_001083214.2| exonuclease 3'-5' domain containing 2 [Xenopus laevis]
Length = 642
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 18/212 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CDRKK +WYL + + LV P + L FEP GRPE
Sbjct: 372 KSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGDLVSAIPFIVKLRFEPSGRPESNA- 430
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+N+CV CG+ Y+R I+P YR HFP Q+K H SHD++LLC CH V++
Sbjct: 431 DYYLTIKENLCVVCGKRESYIRKNIVPHEYRRHFPVQMKDHNSHDVLLLCTSCHAVSNYY 490
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K++++ EF P+ G + E + Q+R+AA ALL+
Sbjct: 491 DSNLKQKLAEEFNAPI---------------GCEEGVRLLEDPIRR-QVRSAARALLNVA 534
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+P R+EEL + +Y ++++E ++ A
Sbjct: 535 -NLPKCRKEELISEIKAFYNMEDVTEETIKEA 565
>gi|395504159|ref|XP_003756424.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2
[Sarcophilus harrisii]
Length = 620
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 131/236 (55%), Gaps = 18/236 (7%)
Query: 480 NGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAK 539
+G + R K+ + L + KSP+Y NC ++A DG+ LC CDR+K +WYL + + +
Sbjct: 325 SGNQQGRDPRKQKQKSLGKGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLDKGIGE 384
Query: 540 LVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPE 599
LV ++P + L FEP GRPE ++Y+ K+N+CV CG+ Y+R ++P YR HFP
Sbjct: 385 LVSEDPFVVKLRFEPSGRPESP-KDYYLMVKENLCVVCGKKESYIRKNVVPHEYRRHFPI 443
Query: 600 QLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSAS 659
Q+K H SHD++LLC CH +++ +K+Q++ E G P+ G
Sbjct: 444 QMKDHNSHDVLLLCTSCHAISNYYDNNFKQQLAGECGAPI---------------GSEEG 488
Query: 660 ITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+ E V Q+R+ A ALL + +P+ R+EEL + + ++ ++ L+ A
Sbjct: 489 LRLLEDPVRR-QVRSGARALL-NAENLPAYRKEELLQGIKEFFNTETVTDLMLQEA 542
>gi|321462436|gb|EFX73459.1| hypothetical protein DAPPUDRAFT_325251 [Daphnia pulex]
Length = 417
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 113/212 (53%), Gaps = 16/212 (7%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KS +Y NC + A DG+ LC CD KK WY + ++V +NP + L FEP GRP E +
Sbjct: 202 KSALYDNCILQAPDGQQLCTCDYKKAMWYFAKGRGEVVCENPMTVRLNFEPSGRPSSEYD 261
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
+Y+ K N CV CG+ +LR I+P YR HFPE LK H+SHDI+LLC++CH + ++
Sbjct: 262 RYYLTDKVNKCVVCGQSESFLRKNIVPHEYRKHFPEHLKDHKSHDILLLCIECHTICNSH 321
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K ++S + P+ + S+ G ++ AA AL+ +
Sbjct: 322 ENAVKNELSIKCNAPIGTERDVKSKLDRKLSG----------------VQKAANALIFNR 365
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+PSNR EL I+ YY ++ E LE A
Sbjct: 366 QAIPSNRISELEEIIKNYYEVEVVTPEILEMA 397
>gi|37748547|gb|AAH59966.1| MGC68561 protein [Xenopus laevis]
Length = 511
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 18/212 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CDRKK +WYL + + LV P + L FEP GRPE
Sbjct: 241 KSPLYDNCFLHAPDGQPLCTCDRKKAQWYLDKGIGDLVSAIPFIVKLRFEPSGRPESNA- 299
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+N+CV CG+ Y+R I+P YR HFP Q+K H SHD++LLC CH V++
Sbjct: 300 DYYLTIKENLCVVCGKRESYIRKNIVPHEYRRHFPVQMKDHNSHDVLLLCTSCHAVSNYY 359
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K++++ EF P+ G + E + Q+R+AA ALL+
Sbjct: 360 DSNLKQKLAEEFNAPI---------------GCEEGVRLLEDPIRR-QVRSAARALLNVA 403
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+P R+EEL + +Y ++++E ++ A
Sbjct: 404 -NLPKCRKEELISEIKAFYNMEDVTEETIKEA 434
>gi|351708674|gb|EHB11593.1| Exonuclease 3'-5' domain-containing protein 2 [Heterocephalus
glaber]
Length = 612
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 34/249 (13%)
Query: 477 YKQNGV----KVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWY 532
YK +G+ R K + L V + KSP+Y NC ++A DG+ LC CDR+K +WY
Sbjct: 311 YKSSGIVPGNHQGRDPRKNKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWY 370
Query: 533 LTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSC 592
L + + +LV ++P + L FEP GRPE G + + KKN+CV CG+ + +R +IP
Sbjct: 371 LDKGIGELVSEDPFVVKLQFEPAGRPESPGG-YCLLVKKNVCVVCGKTDSCIRKNVIPHE 429
Query: 593 YRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEA 652
YR HFP ++K H SHD++LLC CH +++ K+Q++ EF P+
Sbjct: 430 YRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDSHLKQQLAKEFQAPI------------- 476
Query: 653 RPGFSASITNFEAGVSPL------QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGRE 706
+ E G+ L Q+R+ A ALL + ++P++R+EEL + + +Y
Sbjct: 477 ---------SSEEGLRLLEDPERRQVRSGARALL-NAVSLPASRKEELLQALREFYNRDS 526
Query: 707 ISQEDLERA 715
I+ E L+ A
Sbjct: 527 ITDEMLQEA 535
>gi|321465548|gb|EFX76549.1| hypothetical protein DAPPUDRAFT_55085 [Daphnia pulex]
Length = 181
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 105/181 (58%), Gaps = 9/181 (4%)
Query: 75 GSHPYELEITALLENPRPEFDFSNVDLDLQR-----SDSFVWVETKSQLNELANALSKEF 129
HPYE E+ +P+ F V ++ R S + V+T L L +
Sbjct: 5 ARHPYEFELNKFTPHPK----FWTVQREVPRFKPVSSTPLIMVDTTEAFEHLLQDLLSQT 60
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
VD E HS RS+ G T L+QISTEK DY+VDT+ L D + L F DP + K+F G+
Sbjct: 61 VIGVDLEHHSDRSYRGITCLMQISTEKTDYIVDTLQLWDHLQPLNEVFCDPTIVKIFQGA 120
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D+DV+WLQRDF IYVVNLFDT +A +L +K L++LL+ YC V +K Q EDWR RP
Sbjct: 121 DSDVIWLQRDFGIYVVNLFDTFQAASLLGFQKKGLSFLLQHYCQVHVDKKYQLEDWRIRP 180
Query: 250 L 250
L
Sbjct: 181 L 181
>gi|321462442|gb|EFX73465.1| hypothetical protein DAPPUDRAFT_325261 [Daphnia pulex]
Length = 474
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 113/212 (53%), Gaps = 16/212 (7%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KS +Y NC + A DG+ LC CD KK WY + ++V +NP + L FEP GRP E +
Sbjct: 202 KSALYDNCILQAPDGQQLCTCDYKKAMWYFAKGRGEVVCENPMTVRLNFEPSGRPSSEYD 261
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
+Y+ K N CV CG+ +LR I+P YR HFPE LK H+SHDI+LLC++CH + ++
Sbjct: 262 RYYLTDKVNKCVVCGQSESFLRKNIVPHEYRKHFPEHLKDHKSHDILLLCIECHTICNSH 321
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K ++S + P+ + S+ G ++ AA AL+ +
Sbjct: 322 ENAVKNELSIKCNAPIGTERDVKSKLDRKLSG----------------VQKAANALIFNR 365
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+PSNR EL I+ YY ++ E LE A
Sbjct: 366 QAIPSNRISELEEIIKNYYEVEVVTPEILEMA 397
>gi|449016126|dbj|BAM79528.1| similar to polymyositis-scleroderma overlap syndrome associated
autoantigen [Cyanidioschyzon merolae strain 10D]
Length = 492
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 140/277 (50%), Gaps = 38/277 (13%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH----DEISILQPFFADPGVCKVF 186
A+D E HS RS+ GF L+QIS+ D ++D +AL D P V KV
Sbjct: 134 VAIDLEAHSYRSYQGFVCLVQISSVDCDAVIDALALRSALADPSGAFIRLLRHPRVVKVM 193
Query: 187 HGSDNDVMWLQRDFH--IYVVNLFDTAKACEVLSKPQKSLAYLLETYC------------ 232
HG+D+DV+WLQRDF +VNLFDTA+A ++L +P SLA+L+ Y
Sbjct: 194 HGADSDVLWLQRDFTPAARIVNLFDTARAAQLLGEPSVSLAHLISCYARDEDRTADPASL 253
Query: 233 ------GVATNK-FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
+A+ K Q DWR RPLP+ ML YA+ D HYLLY+ + L L Q+ + NS
Sbjct: 254 RNGSRDALASEKRVFQVADWRIRPLPSSMLHYARQDTHYLLYLYRVLSTRLVQETDPNS- 312
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+ N + + +S V L+ Y + E AA + L + + +S
Sbjct: 313 ---PETNRLQQLWLKSADVALRRYALQ------EVAADA---HLKVARQYKAMLSDTMLP 360
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L+R L WRD +AR DES +V + +IAL + P
Sbjct: 361 LLRDLIHWRDQIAREADESPPYVFPNHFLIALVRETP 397
>gi|111226700|ref|XP_642107.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970724|gb|EAL68469.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 686
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 18/240 (7%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
K +Y NC +Y+ D LL +KK+EWY++R LA ++++ P +I L F+P G G+
Sbjct: 389 KRVLYDNCLMYSPDDVLLSSISKKKVEWYVSRQLADIIKEEPLSIKLKFQPHGEGH-SGD 447
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
+FY+ SK+NICV CG + LR+ ++P CYR + PE++KSH SHD++L+C DCH +
Sbjct: 448 QFYLASKENICVVCGSTHKILRHSMVPHCYRQYLPEEIKSHSSHDVILVCCDCHAILDKK 507
Query: 624 AEKYKKQISAEFGIPL------FI--HKVADSRKAEARPGFSASITNFEAGVSPLQLRTA 675
+ K IS ++ +P+ FI H + + + + T +S L
Sbjct: 508 NQIMKMIISQQYNVPIDNENKQFITDHTLLKITQIASIVKNNFYSTGNNNNISEDNLIKG 567
Query: 676 AMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRR----HAKK 731
+P + EE+++IVM Y G EI+ EDL+ L ++P+++ H KK
Sbjct: 568 NKKC---KKNIPDEKLEEMKKIVMEYIGKEEINVEDLDEIL--KLNPKQKNENYIPHEKK 622
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDV 910
PH K+V+D +L GE GI +F + WR+ FVE++ P FLP W +
Sbjct: 618 PHEKKVIDKVL-AMGEKGIFEFIRSWRKNFVESVQPKFLPEHWSI 661
>gi|302846312|ref|XP_002954693.1| hypothetical protein VOLCADRAFT_95512 [Volvox carteri f.
nagariensis]
gi|300260112|gb|EFJ44334.1| hypothetical protein VOLCADRAFT_95512 [Volvox carteri f.
nagariensis]
Length = 182
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 96/154 (62%), Gaps = 28/154 (18%)
Query: 507 VYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPK----------- 555
VY NCR+ +++G+LLC+CD +KL WYL + LA V ++PP I LLFE +
Sbjct: 5 VYQNCRMLSHEGQLLCFCDSRKLRWYLNKGLAVQVCEDPPTIQLLFEHQNTDQKLGEQLG 64
Query: 556 --------GRPEDEG--NEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHR 605
G E EG ++FY QSK N CV CG +HYLRYR++P+CYR H P LKSHR
Sbjct: 65 GHRATGREGVREGEGGTDDFYTQSKSNRCVGCGCSSHYLRYRVLPACYRRHMPSALKSHR 124
Query: 606 SHDIVLLCVDCHEVA-------HAAAEKYKKQIS 632
SHD+VLLC+DCHE+A H+ + + ++S
Sbjct: 125 SHDVVLLCIDCHELAQKPLARQHSGHRRLRTELS 158
>gi|307204165|gb|EFN83006.1| Exonuclease 3'-5' domain-like-containing protein 2 [Harpegnathos
saltator]
Length = 643
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 16/203 (7%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWY+ + L +LV+ +P + L FEP GR E ++
Sbjct: 359 PLYHNCYLQAPDGEILCTCDRKKAEWYIGKGLGELVQTDPYTVKLNFEPSGRALGEVGQY 418
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG ++R ++P YR +FP +K+H+SHD++LLC CHE+++
Sbjct: 419 YTQVKVNQCVVCGCTEKFIRKNVVPREYRKYFPLVMKAHQSHDVLLLCPSCHEISNNNDL 478
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ +++++ PL I + R ++NF LQ +A+ +L G +
Sbjct: 479 QLRRKLAEMCDAPL-IGPLTHMR--------DKYMSNFR----KLQ---SAVKVLKQGLS 522
Query: 686 MPSNRREELRRIVMRYYGGREIS 708
+P RREEL +M + G +EIS
Sbjct: 523 IPQRRREELEIYIMEHTGQKEIS 545
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 864 HGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
+ PHG +VV Y R+ E G+ + + WR+ F+ + P +LP W V H
Sbjct: 571 YQPHGLKVVQYFQRQ--EGGLVELERMWREHFLTTMKPKYLPNLWSVRH 617
>gi|322801849|gb|EFZ22421.1| hypothetical protein SINV_07950 [Solenopsis invicta]
Length = 612
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 21/213 (9%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWY+T++L KLVE +P + L FEP GR E ++
Sbjct: 330 PLYHNCYLQAPDGDILCTCDRKKAEWYITKNLGKLVETDPYTVRLNFEPSGRALGEVGQY 389
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG ++R ++P YR +FP +K+H+SHD++LLC CHE+++
Sbjct: 390 YTQVKLNQCVVCGSNEKFIRKNVVPREYRKYFPLVMKAHQSHDVLLLCPSCHEISNNHDL 449
Query: 626 KYKKQISAEFGIPLF--IHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
+ +++++ PL + V D+ R S A+ L
Sbjct: 450 QLRRKLADMCDAPLIGPMTHVRDNYLHNRRKLLS------------------AVKALKEK 491
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERAL 716
T+P +REE + ++ + G ++I+Q DL AL
Sbjct: 492 LTLPQRQREEYEKYILEHTGQQKITQ-DLLNAL 523
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 841 NSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALH 900
N ++N + P P + PHG +VV Y + E G+ + + WR+ F+ ++
Sbjct: 524 NEQLKNAL-TQKPIPTK------YQPHGLKVVQYF--QMQESGLIELERTWREHFLYTMN 574
Query: 901 PHFLPAGWDVMH 912
P +LP+ W V H
Sbjct: 575 PKYLPSLWSVRH 586
>gi|85000709|ref|XP_955073.1| 3'-5' exonuclease [Theileria annulata strain Ankara]
gi|65303219|emb|CAI75597.1| 3'-5' exonuclease, putative [Theileria annulata]
Length = 790
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%), Gaps = 24/285 (8%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ +S N + + L ++D E H ++ GF L+Q+ST +E+Y++D
Sbjct: 471 VQNKIDYKLIDNESDFNAMLDKLKNSRILSMDVEHHDTETYRGFICLLQLSTPQENYIID 530
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ +++ L DP + K+ HG+ NDV+WLQRDF+I+VVNLFDT +A VL+ P++
Sbjct: 531 PFKIFGKMNKLNRLTTDPKILKIMHGACNDVIWLQRDFNIFVVNLFDTREAAIVLNLPEQ 590
Query: 223 SLAYLLETYCGVATNKFLQREDWRQ---------RPLPAEMLQYAQTDAHYLLYIAKCLV 273
SLA L++ Y + NK Q +W + RPL EML YA D+HYL+ + L
Sbjct: 591 SLAKLVQKYFNIKLNKRFQISNWSKSYNCLNCGIRPLDDEMLDYACCDSHYLIPLYNTLK 650
Query: 274 AELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT-KEIESYPGEAAASSIFFRLLNG 332
E+ +D +++ CL+ Y + E Y + S
Sbjct: 651 DEI--------LSKEDGRVKIIQVMNNGRETCLKQYVDRGPEIYKKFKSISK------RH 696
Query: 333 QGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIAL 377
+ + + V+ +L+ + A+R+ +AR D+S + ++ D I L
Sbjct: 697 KIKIPELDFVSYNLLLNIIAFRNFLARKLDKSEKLIIRDYQIALL 741
>gi|159480884|ref|XP_001698512.1| hypothetical protein CHLREDRAFT_142979 [Chlamydomonas reinhardtii]
gi|158282252|gb|EDP08005.1| predicted protein [Chlamydomonas reinhardtii]
Length = 3780
Score = 145 bits (367), Expect = 8e-32, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 26/234 (11%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KS +Y NCR+ A DG +LC C KK+ WYL R LA + + P I L FEP+GR + +
Sbjct: 492 KSVLYENCRLLAPDGAVLCTCGAKKVRWYLERGLAVVEAEAPMTIRLKFEPRGRGHAD-D 550
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
E+Y+ K+N C CG YLR+ ++P CYR +FP +KSH SHDIVL+C CH+ + A
Sbjct: 551 EYYLSDKENRCCVCGSDGEYLRHSVVPHCYRQYFPTAMKSHLSHDIVLMCPPCHKSCNMA 610
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
+ + ++G PL +A+ F +R+A AL +
Sbjct: 611 DQARMSVLGRQYGAPL----------------GAATAAKFLHDTDLGAVRSAGRALTNRK 654
Query: 684 PTMPSNRREELRRIVMRYYG---GREISQEDLERALLVGMSPRER----RRHAK 730
+P RR EL +V R+ G + +S+ L++A + PR R HA+
Sbjct: 655 VVIPPERRSELEAVVRRHLGVQHDQPLSETQLQQA--ADVDPRTEDENWRSHAQ 706
>gi|432954565|ref|XP_004085540.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oryzias latipes]
Length = 623
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 17/198 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC +YA DG+ LC CD+KK WYL + + L ++P + LLFEP GRPE + +
Sbjct: 348 KSPLYDNCFLYAPDGQPLCTCDKKKARWYLNKGIGVLQSEDPFIVRLLFEPSGRPESQ-H 406
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+N+CV CG+ + Y+R I+P YR HFP +LK H SHDI+LLC CH ++
Sbjct: 407 DYYLTEKENLCVVCGKADSYIRKNIVPHEYRRHFPTELKDHNSHDILLLCTSCHAASNVH 466
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
K+ ++ EF P G + FE ++R+AA ALL G
Sbjct: 467 DGVLKQMLAEEFSAP---------------QGCEEGVRVFEDS-DRRRVRSAARALLSSG 510
Query: 684 PTMPSNRREELRRIVMRY 701
+P R+EEL+ ++ ++
Sbjct: 511 DGLPEQRKEELQLLIRKF 528
>gi|334310653|ref|XP_001378586.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2
[Monodelphis domestica]
Length = 586
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 128/231 (55%), Gaps = 18/231 (7%)
Query: 485 SRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDN 544
R K+ S+ L + KSP+Y NC ++A DG+ LC CDR+K +WY+ + + +LV ++
Sbjct: 296 GRDPRKQKSKPLGKGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYIDKGIGELVSED 355
Query: 545 PPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSH 604
P + L FEP GRPE ++Y+ K N+CV CG+ Y+R ++P YR HFP ++K H
Sbjct: 356 PFVVKLQFEPSGRPESP-KDYYLMIKDNLCVVCGKRESYIRKNVVPHEYRKHFPIEMKDH 414
Query: 605 RSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFE 664
SHD++LLC CH +++ K+ ++ E P+ G + E
Sbjct: 415 NSHDVLLLCTSCHAISNYYNNNLKQHLAEECEAPI---------------GSEEGLRLLE 459
Query: 665 AGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+ Q+R+ A ALL + ++P++R+EEL + + ++ I+ + L+ A
Sbjct: 460 DPIR-RQVRSGARALL-NAKSLPASRKEELLQAIKEFFNTDTITDQMLQEA 508
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 818 MNSTSKVSDSKDDSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLR 877
+N+ S + K++ + + + ++ + + ++++ + PHG +VV Y
Sbjct: 474 LNAKSLPASRKEELLQAIKEFFNTDTITDQMLQEAANLETRINNENYIPHGLKVVQY--- 530
Query: 878 EYGEDGIRQFCQR---WRQVFVEALHPHFLPAGWDVMH 912
Y + G+R + WRQ F++++ P LP W V H
Sbjct: 531 -YAKGGLRSLMKLESLWRQHFLDSMKPKHLPEQWSVNH 567
>gi|430811289|emb|CCJ31212.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 767
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 61/387 (15%)
Query: 75 GSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKE 128
SHPYE EI L + +P +D +WV T L E+ L
Sbjct: 176 SSHPYEYEINNIKYSQELFKEKKP------IDPIPFNDSKAIWVNTIQLLEEMVKNLKNA 229
Query: 129 FFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHG 188
AVD E H RS+ GF L+QIST D+++DT+ L +E+ IL F DP + KV HG
Sbjct: 230 TEIAVDLEHHDYRSYQGFVCLMQISTRNIDWIIDTLELREELEILNEVFTDPNIMKVLHG 289
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+ D++WLQRDF +Y+V LFDT A +L E + R
Sbjct: 290 ASMDIIWLQRDFGLYIVGLFDTYHATRILG---------FEGHVIF-------------R 327
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PLP EM YA++D H+LLYI L EL + + N +L SN V L+V
Sbjct: 328 PLPEEMFSYARSDTHFLLYIYDQLKNELLIKSTLSH-------NLLLSVLSASNNVALRV 380
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
+ K + Y + + +L + S + ++ L WRD +AR DES+R+V
Sbjct: 381 FEK--DKYDVDGLGVDGWKNILQKWSNCLT-SDLQVSVLISLHQWRDKVARQEDESVRYV 437
Query: 369 LSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVVCSHLDDVERQVCN 428
L + ++ +A P + + V L++ S +P P+V H+D++ + + +
Sbjct: 438 LPNHILVQIAVNCPEDASSV-------------LSICSHIP---PLVRVHVDEIVQIIRS 481
Query: 429 NVEN-LDDILLANLQKCLGPNGSCPLS 454
++ L I L N + + SC +
Sbjct: 482 TKQDELKKISLLNKLEIIPSQDSCSFN 508
>gi|46249983|gb|AAH68411.1| Zgc:175195 protein [Danio rerio]
Length = 504
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 30/219 (13%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CD+KK +WYL + + +LV ++P + LLFEP GRP+ E
Sbjct: 232 KSPLYDNCFLHAPDGQPLCTCDKKKAKWYLEKGIGELVSEDPFIVRLLFEPSGRPDSE-K 290
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ +K+N+CV CG+ + Y+R I+P YR HFP ++K H SHDI+LLC CH ++
Sbjct: 291 DYYLTAKENLCVVCGKVDSYIRKNIVPHEYRRHFPSEMKDHNSHDILLLCTACHAASNVH 350
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQ------LRTAAM 677
K +++ E P E GV L+ +R+AA
Sbjct: 351 DGALKAELAEEHAAP----------------------QGCEEGVRLLEDADRRRVRSAAR 388
Query: 678 ALLHHGPTMPSNRREELRRIVMR-YYGGREISQEDLERA 715
ALL MP+ R+EEL ++ + G++++QE L+ A
Sbjct: 389 ALLSASDGMPTARKEELLSVIQSCFCNGQQVTQEVLQDA 427
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 839 CENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ---RWRQVF 895
C V + +++S + PHG +VV + Y E G+R + RWRQ F
Sbjct: 414 CNGQQVTQEVLQDAAALETRISNENYVPHGLKVV----QAYAEQGLRGLMELECRWRQHF 469
Query: 896 VEALHPHFLPAGWDVMH 912
+ ++ P LP W V H
Sbjct: 470 LTSMQPRHLPPLWCVNH 486
>gi|167555226|ref|NP_001107878.1| exonuclease 3'-5' domain-containing protein 2 [Danio rerio]
gi|166796362|gb|AAI59254.1| Zgc:175195 protein [Danio rerio]
Length = 617
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 30/219 (13%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CD+KK +WYL + + +LV ++P + LLFEP GRP+ E
Sbjct: 345 KSPLYDNCFLHAPDGQPLCTCDKKKAKWYLEKGIGELVSEDPFIVRLLFEPSGRPDSE-K 403
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ +K+N+CV CG+ + Y+R I+P YR HFP ++K H SHDI+LLC CH ++
Sbjct: 404 DYYLTAKENLCVVCGKVDSYIRKNIVPHEYRRHFPSEMKDHNSHDILLLCTACHAASNVH 463
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQ------LRTAAM 677
K +++ E P E GV L+ +R+AA
Sbjct: 464 DGALKAELAEEHAAP----------------------QGCEEGVRLLEDADRRRVRSAAR 501
Query: 678 ALLHHGPTMPSNRREELRRIVMR-YYGGREISQEDLERA 715
ALL MP+ R+EEL ++ + G++++QE L+ A
Sbjct: 502 ALLSAIDGMPTARKEELLSVIQSCFCNGQQVTQEVLQDA 540
>gi|193290152|ref|NP_001123262.1| exonuclease 3'-5' domain-like 2 [Nasonia vitripennis]
Length = 605
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 20/240 (8%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CD+KK +WY+++ L ++V+++P + L FEP GR E ++
Sbjct: 309 PLYHNCYLQAPDGDILCTCDKKKAQWYVSKQLGEVVQEDPFTVKLKFEPSGRALGEVGKY 368
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG + ++R ++P YR +FP +KSH+SHDI+LLC CHE+++
Sbjct: 369 YTQVKVNQCVVCGNSDKFIRKNVVPREYRRYFPLVMKSHQSHDILLLCPACHEISNCHDL 428
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ ++ K+ADS A S + LQ +A+ +L G
Sbjct: 429 QLRR-------------KLADSCDAPLSGPLSHTRDEVPRDWRMLQ---SAVKVLRDGTV 472
Query: 686 MPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERRRHAKKRGLSLKMSKPTDFP 745
+P R++EL V ++ G REI+ L L +S + ++H + L +M K T P
Sbjct: 473 IPHKRKKELEMYVTKFTGNREIT-PSLLNVLHEQLSMKSPQKH---KLLQDRMKKNTSTP 528
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 844 VQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHF 903
+Q+ ++ TP +K PHG++VV Y E E G+ + + WR+ F+ + P +
Sbjct: 517 LQDRMKKNTSTPQTKCQ-----PHGQKVVQYF--ENREGGLVELERLWREHFLSTMKPKY 569
Query: 904 LPAGWDVMH 912
LP W V H
Sbjct: 570 LPELWSVCH 578
>gi|321452793|gb|EFX64106.1| hypothetical protein DAPPUDRAFT_66464 [Daphnia pulex]
Length = 181
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQR-----SDSFVWVETKSQLNELANALSKEFFF 131
HPYE E L+ P+ F + ++ S + V+T +L L +
Sbjct: 7 HPYEFE----LKKFSPDSKFLIIKHEIPHFLPVSSTPLIVVDTTEAFEQLLQDLLSQTVI 62
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
VD E HS RS+ G T L+QIST+K DY++DT+ L D + L F DP + K+F G+D+
Sbjct: 63 GVDLEHHSDRSYRGITCLMQISTDKTDYIIDTLKLWDHLQPLNKVFCDPNIVKIFQGADS 122
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRDF IYVVNLFDT +A +L +K L++LL+ YC V +K Q EDWR RPL
Sbjct: 123 DVIWLQRDFGIYVVNLFDTFQAASLLGFQKKGLSFLLQHYCQVHVDKKYQLEDWRIRPL 181
>gi|321452292|gb|EFX63714.1| hypothetical protein DAPPUDRAFT_66837 [Daphnia pulex]
Length = 181
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 77 HPYELEITALLENPRPEFDFSNVDLDLQR-----SDSFVWVETKSQLNELANALSKEFFF 131
HPYE E L+ P+ F + ++ S + V+T L L +
Sbjct: 7 HPYEFE----LKKFSPDSKFLIIKHEIPHFLPVSSTPLIMVDTTEAFELLLRDLLSQMVI 62
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
VD E HS RS+ G T L+QIST+K DY++DT+ L D + L F DP + K+F G+D+
Sbjct: 63 GVDLEHHSDRSYRGITCLMQISTDKTDYIIDTLKLWDHLQPLNKVFCDPNIVKIFQGADS 122
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
DV+WLQRDF IYVVNLFDT +A +L +K L++LL+ YC V +K Q EDWR RPL
Sbjct: 123 DVIWLQRDFGIYVVNLFDTFQAASLLGFQKKGLSFLLQHYCQVHVDKKYQLEDWRIRPL 181
>gi|403223072|dbj|BAM41203.1| uncharacterized protein TOT_030000466 [Theileria orientalis strain
Shintoku]
Length = 820
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 21/276 (7%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ V T+ L + + ++D E S ++ G LIQ+ST +E+Y+VD +
Sbjct: 421 YKMVLTEEDLKAMIEKIQNNTILSIDVEHWSKNTYRGIVCLIQLSTPEENYIVDPFDIFT 480
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+++IL DP + KV HGSDND+ WLQRDF +Y+VN+FDT +A +VL+ ++SL L+
Sbjct: 481 KLNILNVVTTDPRILKVMHGSDNDIEWLQRDFGVYIVNMFDTRQAAKVLNLKEESLMKLI 540
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYL--LYIAKCLVAELKQQGNENSYC 286
+ Y V NK Q DW +RPL EML YA +D++YL LYI + NE
Sbjct: 541 DKYFNVKMNKKYQLADWSKRPLDEEMLNYACSDSNYLIPLYI---------KMKNEILST 591
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKE-IESYPGEAAASSIFFRLL-NGQGGVSSISSVTQ 344
D K + S +CL Y +E Y F R+ + S+S V
Sbjct: 592 SDGKVKMI-RVMNYSKNICLTQYVDNGVEMYRK-------FIRITKKNKIERKSMSFVQY 643
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANK 380
+ + L +R+ AR D S + V+ D + L K
Sbjct: 644 NFMLNLLEFRNYAARKLDVSEQMVIRDYQLGLLVKK 679
>gi|405977154|gb|EKC41618.1| Exonuclease 3'-5' domain-containing protein 2 [Crassostrea gigas]
Length = 860
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 33/244 (13%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
K P+Y+NC + A DG+ LC CD +K+EWYL + LA V+++P + L FEP GRPE E +
Sbjct: 552 KRPLYYNCFLLAPDGQELCTCDVRKVEWYLEKGLAVKVKEDPLTVKLNFEPGGRPEGE-D 610
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+Q K NICV+CG ++ +++P YR FP LK H SHD++LLCV CH +
Sbjct: 611 DYYLQQKDNICVACGSEEMLIKKQVVPKEYRRFFPTSLKDHSSHDVLLLCVPCHRKSTQY 670
Query: 624 AEKYKKQISAEFGIPL----FIHKVADSR---------------------------KAEA 652
+ Q++ E G P+ F + D K
Sbjct: 671 DNVLRYQLAKESGYPIDMGFFPTSLKDHSSHDVLLLCVPCHRKSTQYDNVLRYQLAKESG 730
Query: 653 RPGFSASITNFEAGVSPLQLRTAAMALLH-HGPTMPSNRREELRRIVMRYYGGREISQED 711
P S A ++++AA ALL +P RR++L+++V+ +YG E+S E
Sbjct: 731 YPIDMGSSVKVHADRDLQKVKSAARALLSPKSDQIPVERRKDLQQVVLDFYGTEELSTEI 790
Query: 712 LERA 715
L+ A
Sbjct: 791 LQDA 794
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHR 913
PHGK V+ ++ + +GI F +RWRQ F++ + P +LP+ W V H+
Sbjct: 808 PHGKGVIRHVRKN---EGIYNFERRWRQHFLDTMKPKYLPSKWSVDHK 852
>gi|300121240|emb|CBK21621.2| unnamed protein product [Blastocystis hominis]
Length = 500
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 153/282 (54%), Gaps = 14/282 (4%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+++T+ ++ +L L +V QHS RS+LG+ ++I IS+ + DY +D IA H+
Sbjct: 194 FIDTEEKIMDLIARLKSFRCISVSVIQHSYRSYLGYCSMIMISSGEIDYAIDAIATHNSC 253
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
L F +P + KV + + ++WLQRDF +++VNLFD A ++L + Q S + +L
Sbjct: 254 WKLNDLFTNPSIVKVMFNAGDQLLWLQRDFGVFMVNLFDVQMALKLLDEKQTSFSDVLMN 313
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN-SYCPDD 289
N +R DWR RPL A ML++A+ AH LY++ ++ +L+ + ++ + D
Sbjct: 314 RMNEYINMRFRRADWRTRPLTAGMLRFARQTAHSTLYLSSMVIEQLQNESEKHINRVGDG 373
Query: 290 KF--NFVLEASRRSNTVCLQVYTKEIESY-PGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++E N +CL+ Y K +++Y GE+ + + GQ V + L
Sbjct: 374 RVGDGQIVETLAACNELCLETYHKPVQTYETGESTIAEL------GQ----IFQPVQKML 423
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L WRD++AR DES+++VL ++ +A+ P + ++
Sbjct: 424 FLSLYYWRDVVARELDESVQYVLPLLPLLKVAHAVPKTKEEL 465
>gi|390366383|ref|XP_797941.3| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 570
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 25/224 (11%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KS +YHNCR+ A + LLC CD++K WY+ +++ +L+ + P + LLFEP G P +
Sbjct: 306 KSVMYHNCRLLAPNDTLLCTCDKRKALWYIGKEIGELICEEPLTVRLLFEPAGVPGPD-R 364
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
E+Y KKNICV CG + Y+R ++P YR HFPE LK H SHD++LLC+ CH+ + A
Sbjct: 365 EYYQTEKKNICVVCGREDSYIRKHVVPHEYRRHFPEYLKMHSSHDVLLLCLRCHQRSSAY 424
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSP--LQLRTAAMALLH 681
++ +S + P+ ++ TN + P +Q+R+AA AL+
Sbjct: 425 DNYVRQNVSELYHAPI------------------SNKTNAKRLEDPQRVQVRSAARALIR 466
Query: 682 HGPT--MPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPR 723
H +P +R +EL + ++G EI L+ A V M R
Sbjct: 467 HQKVNNLPEHRIQELMDHLQEFFGDDEIDDALLQEA--VSMETR 508
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 836 DDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVF 895
DDE +++ +Q + N HG +VV+ +++E E G+R+F + WRQ F
Sbjct: 491 DDEIDDALLQEAVSMETRVANEDFV----SSHGLKVVEEVMKE--ESGLRKFEKMWRQNF 544
Query: 896 VEALHPHFLPAGWDVMH 912
++ + P +LP W V H
Sbjct: 545 LDTMKPQYLPELWSVDH 561
>gi|291239803|ref|XP_002739809.1| PREDICTED: exonuclease 3-5 domain containing 2-like [Saccoglossus
kowalevskii]
Length = 682
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 120/214 (56%), Gaps = 18/214 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPP-AIMLLFEPKGRPEDEG 562
+ P+Y NC++ A DG+LLC CDR+K EWY+ +D+ ++V D+ P + L FEP GRP E
Sbjct: 386 RGPLYDNCQLLAPDGQLLCTCDRRKAEWYVHKDIGEVVHDDQPYTVRLKFEPSGRPGSER 445
Query: 563 NEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHA 622
N +Y+ K+N CV CG + Y+R ++P YR +FP +LK H SHD+VLLC CH
Sbjct: 446 N-YYLTEKENRCVVCGAVDSYIRKNVVPHEYRKYFPRRLKEHSSHDVVLLCFACH----- 499
Query: 623 AAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHH 682
Q+S+ P+ H AD A P S + + ++ +++R+AA AL +
Sbjct: 500 -------QLSSNLDAPMRQH-YADLCDA---PLPSHTHNRYHENITVVKIRSAARALKFN 548
Query: 683 GPTMPSNRREELRRIVMRYYGGREISQEDLERAL 716
+P R+ EL + Y +++ E +E +
Sbjct: 549 RGKLPEARKLELEEYIQNYCSIDDVNDEVIEECI 582
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 856 NSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHR 913
+SKV+ G+ PHG +VV+ + + G G+ +F + WRQ F+ + P FLP W V HR
Sbjct: 585 DSKVTNDGYIPHGYKVVEVVRQSEG--GLIEFEKAWRQHFLNTMQPKFLPELWSVDHR 640
>gi|116747862|ref|YP_844549.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
gi|116696926|gb|ABK16114.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
Length = 295
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 141/273 (51%), Gaps = 24/273 (8%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V +E S+L+ L LS AVDTE +S ++ LIQIS+ + DY++D ++L D
Sbjct: 5 VVIEKPSELDALVRQLSTARHLAVDTESNSFYAYFDRVCLIQISSPERDYIIDPLSLKD- 63
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+S+L F +P + KV H + NDV+ L+RDF LFDTA AC++L Q L+ +LE
Sbjct: 64 LSVLGRLFENPRIEKVLHAASNDVLGLRRDFQFRFNGLFDTAIACKLLGYKQLGLSKILE 123
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
T+ GV+ NK QR DW +RPL + L YA+ D HYL+ + L A+L+ + C
Sbjct: 124 THFGVSLNKRWQRYDWGKRPLVPDQLDYARLDTHYLIALRHMLAADLQSRELWAEAC--- 180
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
+ + K E E F +N G S+ + + +++
Sbjct: 181 -----------------EAFEKASEQQVPEKTFHPRGFLQIN---GARSLDAAGKSILKA 220
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L +R+ AR D + ++S++A++ LA+ P
Sbjct: 221 LYMFREKEARRRDRAPFRIMSNEALLRLADARP 253
>gi|332025467|gb|EGI65632.1| Exonuclease 3'-5' domain-containing protein 2 [Acromyrmex
echinatior]
Length = 606
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 23/233 (9%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWY+T++L KLVE +P + L FEP GR E ++
Sbjct: 324 PLYHNCYLQAPDGDILCTCDRKKAEWYITKNLGKLVETDPYTVRLNFEPSGRALGEVGQY 383
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG ++R ++P YR +FP +K+H+SHD++LLC CHE+++
Sbjct: 384 YTQVKLNQCVVCGCTEKFIRKNVVPREYRKYFPLVMKAHQSHDVLLLCPSCHEISNNHDL 443
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ +++++ PL R F + + V L+ + T
Sbjct: 444 QLRRKLADMCDAPLI------GPMTHVRDNFLHNRRKLHSAVKALREKF----------T 487
Query: 686 MPSNRREELRRIVMRYYGGREIS-------QEDLERALLVGMSPRERRRHAKK 731
+P +REE ++ + G ++I+ E L+ AL+ P + + H K
Sbjct: 488 LPPRQREEYENYILEHTGQQKITPDLLNGLNEQLKNALIQKPIPNKYQPHGLK 540
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 830 DSVGNVDDECENSSVQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQ 889
D + ++++ +N+ +Q P PN + PHG +VV + ++ E G+ + +
Sbjct: 512 DLLNGLNEQLKNALIQ------KPIPNK------YQPHGLKVVQHFQKQ--ESGLVELER 557
Query: 890 RWRQVFVEALHPHFLPAGWDVMH 912
WR+ F+ + P +LP+ W V H
Sbjct: 558 MWREHFLFTMKPKYLPSLWSVRH 580
>gi|380016412|ref|XP_003692179.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2-like [Apis florea]
Length = 613
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 120/225 (53%), Gaps = 23/225 (10%)
Query: 491 KASRDLFVQKFSCKS-------PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVED 543
K ++DL ++ KS P+YHNC + A DG +LC CDRKK EWY+T++L +++E+
Sbjct: 290 KITKDLKIKNIVHKSNIPTRNKPLYHNCYLQAPDGEILCTCDRKKAEWYVTKELGEIIEN 349
Query: 544 NPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKS 603
P + L FEP GR E ++Y Q K N CV CG N ++R ++P YR +FP +K+
Sbjct: 350 EPFTVRLKFEPSGRALGEVGQYYTQVKINQCVVCGTSNKFIRKNVVPREYRKYFPLVMKA 409
Query: 604 HRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNF 663
H+SHDI+LLC CHE+++ + +++++ PL R +
Sbjct: 410 HQSHDILLLCPSCHEISNCHDLQLRRKLADMCDAPL------AGPLTHIRNKHVNNYRKL 463
Query: 664 EAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
+ V L+ RT T+P RR++L + G++++
Sbjct: 464 HSAVKALKERT----------TLPDARRKDLEHYISECTNGQQVT 498
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 129/251 (51%), Gaps = 35/251 (13%)
Query: 469 KNQSNKFVYKQNGV-KVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRK 527
KN K + +N V ++ R ++ +A P+Y NC + A DG +LC CDRK
Sbjct: 265 KNGKKKLLDSKNSVLELKRSMSTRAK------------PLYDNCIMTAPDGEVLCTCDRK 312
Query: 528 KLEWYLTRDLAKLVEDNPP-AIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRY 586
K EWY+ ++LA +V D P I L FEPKGR E ++Y K+N CV CGE + Y+R
Sbjct: 313 KAEWYVIKELADIVSDQPTYTIRLRFEPKGRAVGEVGKYYQTPKENKCVVCGEKDSYIRK 372
Query: 587 RIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVAD 646
++P YR HFP +K H SHD++LLC CH + E + ++++ P
Sbjct: 373 NVVPRDYRRHFPLVMKEHISHDVLLLCAPCHRRSTMNDENMRLKLASLCTAP-------- 424
Query: 647 SRKAEARPGFSASITNFEAGVSPL-QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR 705
F+A+ E V + +LR AA AL++ +P R LRR + R GG
Sbjct: 425 ---------FTANDNPKEIRVESMAELRKAARALVYCADRIPPERLASLRRKMQRLLGGG 475
Query: 706 ---EISQEDLE 713
++++E LE
Sbjct: 476 QGVQLTREALE 486
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 867 HGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHRI 914
HG++VV+Y + G GI + + WR+ F+ ++ P F+P W V H +
Sbjct: 503 HGEKVVEYFKEQPG--GIGELERMWREHFLHSMKPKFMPDLWSVEHNV 548
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 173 LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETY 231
L DPG+ KV G+ D L+ D+++ V + D E P +A L E
Sbjct: 116 LGELLNDPGILKVGIGAIEDAQLLRSDYNLKVESALDLRHLAERCRVPGPYGMARLAEKS 175
Query: 232 CGVATNKF--LQREDWRQRPLPAEMLQYAQTDAH 263
G+ +K ++ DW L L+YA DAH
Sbjct: 176 LGLQLDKHWRVRASDWEALELSERQLKYAANDAH 209
>gi|62088052|dbj|BAD92473.1| exosome component 10 isoform 2 variant [Homo sapiens]
Length = 431
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 111/184 (60%), Gaps = 12/184 (6%)
Query: 71 EKSSGSHPYELEIT------ALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANA 124
E+ +HPY+ E+ A+L+ P+P+ + ++ ++ + +L EL
Sbjct: 249 EQDMFAHPYQYELNHFTPADAVLQKPQPQL-YRPIE-----ETPCHFISSLDELVELNEK 302
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
L FAVD E HS RSFLG T L+QIST ED+++DT+ L ++ IL DP + K
Sbjct: 303 LLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPAIVK 362
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRED 244
VFHG+D+D+ WLQ+DF +YVVN+FDT +A +L+ + SL +LL+ YC V +NK Q D
Sbjct: 363 VFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLAD 422
Query: 245 WRQR 248
WR R
Sbjct: 423 WRIR 426
>gi|410930311|ref|XP_003978542.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Takifugu rubripes]
Length = 620
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KSP+Y NC ++A DG+ LC CD+KK WYL + + +L + P + LLFEP GRP D
Sbjct: 346 KSPLYDNCFLHAPDGQPLCTCDKKKARWYLDKGIGELQSEEPFVVRLLFEPSGRP-DSQQ 404
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ +K+N+CV CG+ + Y+R I+P YR HFP ++K H SHDI+LLC CH ++
Sbjct: 405 DYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPIEMKDHNSHDILLLCTSCHATSNVY 464
Query: 624 AEKYKKQISAEFGIP 638
K+Q++ EF P
Sbjct: 465 DGFLKQQLADEFAAP 479
>gi|307170679|gb|EFN62847.1| Exonuclease 3'-5' domain-like-containing protein 2 [Camponotus
floridanus]
Length = 622
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWY+T+ L +LVE P + L FEP GR E ++
Sbjct: 338 PLYHNCYLQAPDGDILCTCDRKKAEWYITKKLGELVETEPYTVRLNFEPSGRALGEVGQY 397
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG ++R ++P YR +FP +K+H+SHD++LLC CHE ++
Sbjct: 398 YTQVKVNQCVVCGCAEKFIRKNVVPREYRKYFPLVMKAHQSHDVLLLCPPCHESSNNHDL 457
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ +++++ PL R + + + V L+ R
Sbjct: 458 QLRRKLADMCDAPLI------GPMTHVRDKYMQNYRKLLSAVKALRERM----------L 501
Query: 686 MPSNRREELRRIVMRYYGGREISQEDLERAL 716
+P RREEL R V+ + G ++I+ DL AL
Sbjct: 502 LPPRRREELERCVLEHTGQQKIT-PDLLNAL 531
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
PHG +VV Y ++ G G+ + + WR+ F+ + P +LP+ W V H
Sbjct: 552 PHGLKVVQYFQKKEG--GLIELERMWREHFLTTMEPKYLPSLWSVRH 596
>gi|198423738|ref|XP_002125788.1| PREDICTED: similar to exonuclease 3-5 domain-like 2 [Ciona
intestinalis]
Length = 572
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
K P+Y NC++ A DG+LL CDRKK WY+ ++LA +V + P I L FEP GRP +
Sbjct: 301 KQPLYDNCKLQAPDGQLLATCDRKKANWYIEKELADIVTETPFTIRLRFEPAGRPASD-R 359
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+N+CV CG +R ++P YR HFP LK H SHDIV LCV CH+ A
Sbjct: 360 DYYLYDKQNVCVVCGSNGAIVRKNVVPHEYRRHFPLLLKDHVSHDIVPLCVACHQRAGYY 419
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
+ QI+ E+ PL G + ++ E +R+A AL +
Sbjct: 420 DNILRNQIADEYKAPL---------------GSAQAVQMLE-DPERRSVRSAGKALDNAR 463
Query: 684 PTMPSNRREELRRIVMRYYGGREISQEDLERALLV 718
+P R+ L +++M YY +S+E ++ A ++
Sbjct: 464 DRIPEPRKGGLEKVLMDYYQVTSLSEELIKEASIL 498
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
PHG +V+D + E G+ F +RWR+ F+ ++P LP W V H
Sbjct: 509 PHGFKVIDTIQSENSLHGLIDFEKRWREHFLATMNPQHLPHLWSVEH 555
>gi|294943277|ref|XP_002783816.1| Ribonuclease D, putative [Perkinsus marinus ATCC 50983]
gi|239896568|gb|EER15612.1| Ribonuclease D, putative [Perkinsus marinus ATCC 50983]
Length = 350
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 140 LRSFLGFTALIQISTEKEDYLVDTIA------LHDEISILQPFFADPGVCKVFHGSDNDV 193
++S+ GFT LIQI+T K+DY+VD +A +HD +DPG+ KV HG+D DV
Sbjct: 1 MQSYRGFTCLIQIATRKKDYIVDVLAPGIMMKMHD----FNRITSDPGIVKVLHGADMDV 56
Query: 194 MWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPA 252
WLQRD Y+ N+FDT +A VL SL LL+ YCG +K Q DWRQRPL
Sbjct: 57 QWLQRDLSAYLCNMFDTGQAARVLELGGGYSLKNLLDFYCGYKADKANQLADWRQRPLSE 116
Query: 253 EMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEAS--RRSNTVCLQVYT 310
M QYA+ D HYLLYI + A+L G + + S RS V L+ Y
Sbjct: 117 RMKQYARDDVHYLLYIYDRMRAQLLCSGGGVDDGKVTAYGRKMYKSTINRSCDVALKTYK 176
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
+ A S + +S V + ++ L WRD + R D +L+
Sbjct: 177 DADSDFMEHAITLSCKTN--------TPLSLVGRPMLAALMHWRDKLGRQRDVFPNSILT 228
Query: 371 DQAIIALANKAPANRTDVYTTIAQADSDV 399
D+ + +A P R + + V
Sbjct: 229 DRLALRIAMDEPVTREQLLRALGGGSGGV 257
>gi|328783376|ref|XP_001121410.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like [Apis
mellifera]
Length = 613
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 16/203 (7%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWY+T++L +++E+ P + L FEP GR E ++
Sbjct: 312 PLYHNCYLQAPDGEILCTCDRKKAEWYVTKELGEIIENEPFTVRLKFEPSGRALGEVGQY 371
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG N ++R ++P YR +FP +K+H+SHDI+LLC CHE+++
Sbjct: 372 YTQVKINQCVVCGTSNKFIRKNVVPREYRKYFPLVMKAHQSHDILLLCPSCHEISNCHDL 431
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ +++++ PL R + + V L+ RT T
Sbjct: 432 QLRRKLADMCDAPL------AGPLTHIRNKHVNNYRKLHSAVKALKERT----------T 475
Query: 686 MPSNRREELRRIVMRYYGGREIS 708
+P RR++L + G++++
Sbjct: 476 LPDARRKDLEHYISECTNGQQVT 498
>gi|258566335|ref|XP_002583912.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907613|gb|EEP82014.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 635
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 132/287 (45%), Gaps = 27/287 (9%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALL 87
PKPQ +F ++ SPF+ ++K HPY EI
Sbjct: 146 PKPQLSFNNRPNNHDSSPFRPILRQKPHAIVSLPLSPDPAAGIGTEPSEHPYAHEIRNCR 205
Query: 88 ENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P + S S +V T + + L +D E H S+ G
Sbjct: 206 YPPSVYYKSEPQMYQPFESTSATFVNTMEGVQAMLKELKCAKEIGIDLEHHDTHSYYGLV 265
Query: 148 ALIQISTEKEDYLVDTI-ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN 206
L+QIST +D++VDT+ +E+ IL FA+P + KV HGS DV+WLQRD +Y+V
Sbjct: 266 CLMQISTRDKDWIVDTLLPWREELQILNEVFANPQIVKVLHGSSMDVIWLQRDLGLYLVG 325
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
LFDT A L P+KSL +LL+ + K Q DWR RPL M YA++D HYLL
Sbjct: 326 LFDTYHAAAALHYPKKSLKFLLDKFVNFQAEKKYQIADWRVRPLLPGMFDYARSDTHYLL 385
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI 313
YI L EL E S ++ ++V E S+ LQ Y + +
Sbjct: 386 YIYDHLRNELI----ERSTPGENLIDYVQENSKEE---ALQRYERPV 425
>gi|449678427|ref|XP_004209087.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Hydra magnipapillata]
Length = 637
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 130/242 (53%), Gaps = 19/242 (7%)
Query: 477 YKQNGVKVSRQVAKKASRDLFVQKFSCKS-PVYHNCRIYANDGRLLCYCDRKKLEWYLTR 535
+KQ +K++ +V+K V K C+ P+Y NC + A DG++L ++ K +WYL +
Sbjct: 344 FKQKNIKLNNKVSKTVVIKEKVFKHPCREKPLYENCYLLAPDGKILATINQNKAKWYLQK 403
Query: 536 DLAKLVEDNPPAIMLLFEPK-GRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYR 594
L + + P + LLF+P G D+G E+Y K+N+CV CG + +R ++P YR
Sbjct: 404 GLGFIDCEEPFTVRLLFQPHYGTSSDDG-EYYTTVKQNVCVVCGRSENLVRKMVVPHDYR 462
Query: 595 IHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARP 654
HFP +LK H SHD++LLC+ CH A A + +++++A+ PL
Sbjct: 463 KHFPVELKGHTSHDVLLLCLHCHRTAQHADDALRQELAAKHLAPL--------------- 507
Query: 655 GFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
G + + V L++R+AA AL + +P R+ EL I+ YYG IS++ L
Sbjct: 508 GTKERMILIDNPV-LLKIRSAAKALFNQKSKIPYLRKIELETIIKDYYGVDTISEDLLRD 566
Query: 715 AL 716
AL
Sbjct: 567 AL 568
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 867 HGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHRI 914
HG++VV ++RE D + F + WRQ F++ + P ++P W V H I
Sbjct: 583 HGEKVVKDIIRE---DRLFNFIRMWRQHFLDVMQPKYMPELWSVDHNI 627
>gi|224003495|ref|XP_002291419.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973195|gb|EED91526.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 107 DSFVWVETKSQLNELANAL-----SKEFF-FAVDTEQHSLRSFLGFTALIQIS---TEKE 157
D +W+ + ++ ELA + S E A+D E HS R+F GF LIQ+S +
Sbjct: 1 DPGIWIGNEDEMTELATRINDGEQSGEIREIALDLEAHSHRTFAGFVCLIQLSIHISSGY 60
Query: 158 DYLVDTIALHDEI-SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
D+L+D ++L I + L P A+P + KV HG+D+D+ WLQRDF YVVNLFDT +A
Sbjct: 61 DFLIDALSLRHVIPTCLGPILANPNILKVMHGADSDIPWLQRDFGCYVVNLFDTGRASRA 120
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L LA+LL Y G+ +K Q DWR+RPLP +M YA D YLL I L EL
Sbjct: 121 LKFQSAGLAFLLRKYAGLDPDKAHQLSDWRRRPLPDDMRTYAVADTRYLLDIYDKLRLEL 180
Query: 277 K 277
K
Sbjct: 181 K 181
>gi|157133260|ref|XP_001656205.1| 3-5 exonuclease [Aedes aegypti]
gi|108870910|gb|EAT35135.1| AAEL012690-PA [Aedes aegypti]
Length = 771
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 123/236 (52%), Gaps = 20/236 (8%)
Query: 481 GVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKL 540
G K V+K+A+ + + P+Y NC + A DG LLC CDRKK EWY+ ++LA++
Sbjct: 262 GKKKLLSVSKRATIETKRAMATRAKPLYDNCLMQAPDGELLCTCDRKKAEWYVIKELAEI 321
Query: 541 VEDNPP-AIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPE 599
V D P I L FEPKGR + ++Y +K+N CV CG + Y+R ++P YR HFP
Sbjct: 322 VTDQPTYTIRLKFEPKGRAVGDVGKYYQMAKENKCVVCGAKDSYIRKNVVPRDYRRHFPL 381
Query: 600 QLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSAS 659
+K H SHD++LLC CH ++ E + +S+ P FS
Sbjct: 382 VMKEHISHDVLLLCAPCHRTSNMHDENMRLSLSSRCSAP-----------------FSTQ 424
Query: 660 ITNFEAGVSPLQ-LRTAAMALLHHGPTMPSNRREELRRIVMRYYG-GREISQEDLE 713
+ V + LR AA AL++ +P R++ +R+ + + G E++ E LE
Sbjct: 425 DNPKQICVEDMSDLRKAARALVYCAGKIPEERQKAIRKKIQKLLSPGTELTAELLE 480
>gi|66816197|ref|XP_642108.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470232|gb|EAL68212.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 718
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 131/245 (53%), Gaps = 26/245 (10%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
K +Y NC +Y+ D LLC +KK+EWY++R LA ++++ P +I L F+P G G+
Sbjct: 413 KRVLYDNCLMYSPDDVLLCSISKKKVEWYVSRQLADIIKEEPLSIKLKFQPHGEGH-SGD 471
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y+ K+NICV CG + LR+ ++P CYR + PE++KSH SHD++LLC DCH
Sbjct: 472 DYYLAHKENICVVCGSTHKILRHSVVPHCYRQYLPEEIKSHSSHDVLLLCCDCHANMDKR 531
Query: 624 AEKYKKQISAEFGIPL--------------------FIHKVADSRKAEARPGFSASITNF 663
A+ + I+ ++ +PL I K ++ E + +I N
Sbjct: 532 AQIMRMMIAKQYNVPLDSENKVYITDNTLLKITKMALIVKNHFYQQQEQQQEEEKTIINE 591
Query: 664 EAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPR 723
+ S T ++ + +P + EE++ V Y G +EI +DL++ L+ ++P+
Sbjct: 592 DGSCSS---STNKISNKKYKSNIPEYKLEEMKVEVANYIGKKEIDLKDLDQ--LIYLNPK 646
Query: 724 ERRRH 728
++ +
Sbjct: 647 QKNEN 651
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDV 910
PH KQV++ +L GE GI +F + WR+ F+E + P FL W +
Sbjct: 654 PHEKQVMEKVL-ALGEKGIFEFIRSWRKNFIETVQPKFLSQHWSI 697
>gi|302837233|ref|XP_002950176.1| hypothetical protein VOLCADRAFT_104579 [Volvox carteri f.
nagariensis]
gi|300264649|gb|EFJ48844.1| hypothetical protein VOLCADRAFT_104579 [Volvox carteri f.
nagariensis]
Length = 683
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 101/200 (50%), Gaps = 29/200 (14%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
KS +Y NCR+ A DG +LC C KK+ WYL R LA++V +P I L FEP+GR + +
Sbjct: 413 KSVLYENCRLLAPDGAVLCTCGAKKVAWYLERGLARVVSKDPTTIQLKFEPRGRGHAD-D 471
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
E+Y+ K+N C CG YLR+ ++P CYR HFP +KSH SHDIVL+C CH+
Sbjct: 472 EYYLSDKENRCCVCGSTGEYLRHSVVPHCYRQHFPASMKSHLSHDIVLMCPPCHKTCSVR 531
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
++ + + F PL A R G A +
Sbjct: 532 DQRRMEALGRTFQAPLGSATAAKFRHDS---GLGAVV----------------------- 565
Query: 684 PTMPSNRREELRRIVMRYYG 703
+P RR EL ++ R++G
Sbjct: 566 --IPPARRRELEDLLRRHFG 583
>gi|383860961|ref|XP_003705955.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Megachile rotundata]
Length = 589
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 16/203 (7%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWY+T+ L ++E P + L FEP GR E ++
Sbjct: 305 PLYHNCYLQAPDGDILCTCDRKKAEWYITKGLGTIIEKEPFTVRLNFEPSGRALGEVGQY 364
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG ++R ++P YR +FP +K+H+SHDI+LLC CHE +++
Sbjct: 365 YTQVKLNQCVVCGTSEKFIRKNVVPREYRKYFPVVMKAHQSHDILLLCPSCHETSNSHDL 424
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPT 685
+ +K+++ PL + +R + + N+ +L +A A L T
Sbjct: 425 QLRKKLADMCDAPL-AGPITHTR--------NKYVNNWR------KLHSAVKA-LKESAT 468
Query: 686 MPSNRREELRRIVMRYYGGREIS 708
+P RREEL + +++ ++++
Sbjct: 469 LPDVRREELEQYILKCTNQQQVT 491
>gi|270012325|gb|EFA08773.1| hypothetical protein TcasGA2_TC006462 [Tribolium castaneum]
Length = 421
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 28/278 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++TK+ L EL L VD E +S + T L+QIST +DY++D IAL DE+
Sbjct: 76 IDTKTSLEELITDLKAWKELGVDVE-YSDHGYKALTCLVQISTPDKDYIIDAIALKDELH 134
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L F +P + K+FH + ND+ WLQ+D ++VVNLFDT A + L + L LL+ Y
Sbjct: 135 ALNEVFTNPDIVKIFHSAVNDLKWLQQDLGVFVVNLFDTQIAMKALGYKKLGLDALLQDY 194
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
VA +K +QR+D+R+RPLP + YA+ D+HYL+ L EL +
Sbjct: 195 -HVAKDKTMQRQDFRRRPLPPKFKDYARVDSHYLIGFYHKLKNELIEA------------ 241
Query: 292 NFVLEASRRSNTVCLQVYTK-EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
N + N C +Y K E E+Y L+ + V I ++ +L
Sbjct: 242 NLLRAVLDDCNNCCKILYPKVEDEAY-------------LSVRRNVEEIHKRQLLVLEKL 288
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+WR +A+ D+++ VLS + L + P++ D+
Sbjct: 289 NSWRHQIAQYLDKNVGCVLSKSNMETLVLQMPSDSADI 326
>gi|195329844|ref|XP_002031620.1| GM26098 [Drosophila sechellia]
gi|194120563|gb|EDW42606.1| GM26098 [Drosophila sechellia]
Length = 583
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 135/251 (53%), Gaps = 31/251 (12%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+++SNK+V K+ + RQ+A + ++D Y NC + A DG LLC DR+K
Sbjct: 277 QSKSNKWVPKK---QPYRQIATR-TKDF-----------YDNCLLQAPDGELLCTIDRRK 321
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
WYL ++L + + P + L FEP GR + FY K+N CV CG+ + Y+R +
Sbjct: 322 ASWYLNQNLGTHISEEPFTVRLNFEPAGRAVGDVGRFYQTPKENQCVVCGDRDAYIRKNV 381
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
+P YR HFP +KSH SHD++LLC CH++++ + K + +++ + P + S
Sbjct: 382 VPREYRKHFPLVMKSHTSHDVLLLCPTCHQLSNISDLKVRSKLAVQCEAPF--KQEDGSV 439
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR-EI 707
K P ++++A ALLHHG +P+ +R E+ + ++ YY + +I
Sbjct: 440 KYHDDPQLK-------------RVQSAGKALLHHGAKIPAAKRAEMEKTLLDYYSDQTDI 486
Query: 708 SQEDLERALLV 718
++E L +A V
Sbjct: 487 TEELLRQAARV 497
>gi|91088803|ref|XP_968984.1| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 377
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 28/278 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++TK+ L EL L VD E +S + T L+QIST +DY++D IAL DE+
Sbjct: 76 IDTKTSLEELITDLKAWKELGVDVE-YSDHGYKALTCLVQISTPDKDYIIDAIALKDELH 134
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L F +P + K+FH + ND+ WLQ+D ++VVNLFDT A + L + L LL+ Y
Sbjct: 135 ALNEVFTNPDIVKIFHSAVNDLKWLQQDLGVFVVNLFDTQIAMKALGYKKLGLDALLQDY 194
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
VA +K +QR+D+R+RPLP + YA+ D+HYL+ L EL +
Sbjct: 195 -HVAKDKTMQRQDFRRRPLPPKFKDYARVDSHYLIGFYHKLKNELIEA------------ 241
Query: 292 NFVLEASRRSNTVCLQVYTK-EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
N + N C +Y K E E+Y L+ + V I ++ +L
Sbjct: 242 NLLRAVLDDCNNCCKILYPKVEDEAY-------------LSVRRNVEEIHKRQLLVLEKL 288
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+WR +A+ D+++ VLS + L + P++ D+
Sbjct: 289 NSWRHQIAQYLDKNVGCVLSKSNMETLVLQMPSDSADI 326
>gi|195500059|ref|XP_002097212.1| GE24622 [Drosophila yakuba]
gi|194183313|gb|EDW96924.1| GE24622 [Drosophila yakuba]
Length = 583
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 120/209 (57%), Gaps = 16/209 (7%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL+++L L+ + P + L FEP GR + +Y
Sbjct: 301 YDNCLLQAPDGELLCTIDRRKASWYLSQNLGTLINEEPFTVRLNFEPAGRAVGDVGRYYQ 360
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG+ + Y+R ++P YR HFP +KSH SHD++LLC CH++++ + +
Sbjct: 361 TPKENQCVVCGDRDAYIRKNVVPREYRKHFPLVMKSHTSHDVLLLCPTCHQLSNISDLRV 420
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
+ +++ + P F H+ + F ++++A ALLHHG +P
Sbjct: 421 RSKLADQCEAP-FKHEDGSVK--------------FHDDPQLKRVQSAGKALLHHGAKIP 465
Query: 688 SNRREELRRIVMRYYGGR-EISQEDLERA 715
+ ++ E+++ ++ YY + +I++E L++A
Sbjct: 466 AAKKAEMQQTLLDYYTDQTDITEELLQQA 494
>gi|195055346|ref|XP_001994580.1| GH15379 [Drosophila grimshawi]
gi|193892343|gb|EDV91209.1| GH15379 [Drosophila grimshawi]
Length = 591
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 16/209 (7%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR K WYLT++L + + P + L FEP GR + +Y
Sbjct: 303 YDNCLLQAPDGELLCTIDRSKAAWYLTQNLGTQISEQPFTVRLNFEPAGRAVGDVGRYYQ 362
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG + YLR ++P YR HFP +KSH SHDI+LLC +CH+ ++ + K
Sbjct: 363 TPKENQCVVCGRRDAYLRKNVVPREYRKHFPTVMKSHSSHDILLLCPNCHQTSNISDHKI 422
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
+ +++ PL +T + +++A ALLH +P
Sbjct: 423 RSKLATICEAPL---------------ANGDGVTQYHCDQQIRSIKSAGRALLHQRERIP 467
Query: 688 SNRREELRRIVMRYYGGR-EISQEDLERA 715
S + +L + V+ YY EIS+E L++A
Sbjct: 468 SEKVAQLEKAVLDYYKEETEISEELLKKA 496
>gi|312375236|gb|EFR22650.1| hypothetical protein AND_14417 [Anopheles darlingi]
Length = 782
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGN 563
+ P+YHNC + A DG LLC CDR K +WY+ R+L +V +P + L FEP GR DE
Sbjct: 290 QKPLYHNCHLQAPDGELLCTCDRGKAQWYVDRELGDVVSYDPYTVRLRFEPSGRAVDEAG 349
Query: 564 EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAA 623
++Y Q+K NICV CG + R I+P Y I +K H SHD++LLC DCH+ ++
Sbjct: 350 KYYQQTKANICVVCGAKECFNRKNIVPRDYLI-----MKEHVSHDVLLLCADCHQRSNMT 404
Query: 624 AEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG 683
E+ +++++ G PL K E R A I R AA ALL+
Sbjct: 405 DERLRQELAELCGAPLSGQKNGSK---EIRLESMAEI------------RKAARALLYSA 449
Query: 684 PTMPSNRR 691
MP RR
Sbjct: 450 TQMPPERR 457
>gi|194902046|ref|XP_001980562.1| GG17221 [Drosophila erecta]
gi|190652265|gb|EDV49520.1| GG17221 [Drosophila erecta]
Length = 579
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 15/207 (7%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL++DL + + P + L FEP GR + +Y
Sbjct: 297 YDNCLLQAPDGELLCTIDRRKASWYLSQDLGTRISEEPFTVRLNFEPAGRAVADVGRYYQ 356
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG+ + Y+R ++P YR HFP +KSH SHD++LLC CH++++ + +
Sbjct: 357 TPKENQCVVCGDRDAYIRKNVVPREYRKHFPIVMKSHTSHDVLLLCPTCHQLSNISDLRV 416
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
+ +++AE P F H+ S K P ++++A ALL+HG +P
Sbjct: 417 RSKLAAECEAP-FKHEDG-SVKYRDDPQLK-------------RVQSAGKALLYHGAKIP 461
Query: 688 SNRREELRRIVMRYYGGREISQEDLER 714
+ ++ E+++ ++ YY + E+L R
Sbjct: 462 AVKKAEMQQTLLDYYTNQTAITEELLR 488
>gi|340725346|ref|XP_003401032.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus terrestris]
Length = 613
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 30/210 (14%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWYLT+ L +++E P + L FEP GR + ++
Sbjct: 313 PLYHNCYLQAPDGEILCTCDRKKAEWYLTKGLGEVIEKEPLTVRLKFEPSGRALGQVGQY 372
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG + ++R ++P YR +FP +K+H+SHDI+LLC CHE+++
Sbjct: 373 YTQIKINQCVVCGTSDKFIRKNVVPREYRKYFPLVMKAHQSHDILLLCPSCHEISNYHDL 432
Query: 626 KYKKQISAEFGIPL---FIH----KVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMA 678
+ +++++ PL H V +SRK + V L+ RT
Sbjct: 433 QLRRKLADMCDAPLVGPLTHIRNKNVNNSRK-------------LHSAVKALRERT---- 475
Query: 679 LLHHGPTMPSNRREELRRIVMRYYGGREIS 708
T+P RR++L ++ ++++
Sbjct: 476 ------TLPDARRKDLEHYILECTNEKQVT 499
>gi|313216815|emb|CBY38052.1| unnamed protein product [Oikopleura dioica]
Length = 680
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 504 KSPVYHNC-RIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIM--LLFEPKGRPED 560
K P+Y+NC ++ A DG +L D+KK +WY+ + L +LVED + + L FEP GRP
Sbjct: 254 KEPLYNNCVKLLAPDGEVLSITDKKKADWYVKKGLGELVEDTETSFIVRLKFEPSGRPNT 313
Query: 561 EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVA 620
+ ++Y+ K+N+CV C E N LR ++P YR HFP +K H SHD+VLLC+ CH +
Sbjct: 314 DSEKYYVTEKENVCVVCNEKNGLLRKNVVPREYRKHFPIVMKCHVSHDVVLLCLRCHGRS 373
Query: 621 HAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALL 680
+ + +I+ +F PL AD KA P ++ R+ ALL
Sbjct: 374 NELDYLKRARIADKFVAPL---GNADLAKAILEPKERRNV------------RSGGNALL 418
Query: 681 HHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
+ +P R EL I+M Y+ + DLE+
Sbjct: 419 KNRAKLPEKRINELESIIMEYFNA-TVWTGDLEQ 451
>gi|195571747|ref|XP_002103864.1| GD20659 [Drosophila simulans]
gi|194199791|gb|EDX13367.1| GD20659 [Drosophila simulans]
Length = 541
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 134/251 (53%), Gaps = 31/251 (12%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+++SNK+V K+ + RQ+A + ++D Y NC + A DG LLC DR+K
Sbjct: 235 QSKSNKWVPKK---QPYRQIATR-TKDF-----------YDNCLLQAPDGELLCTIDRRK 279
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
WYL ++L + + P + L FEP GR + FY K+N CV CG+ + Y+R +
Sbjct: 280 ASWYLNQNLGTHISEEPFTVRLNFEPAGRAVGDVGRFYQTPKENQCVVCGDRDAYIRKNV 339
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
+P YR HFP +KSH SHD++LLC CH++++ + K + +++ + P + S
Sbjct: 340 VPREYRKHFPLVMKSHTSHDVLLLCPTCHQLSNISDLKVRSKLAVQCEAPF--KQEDGSV 397
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR-EI 707
K P ++++A ALLHHG +P+ ++ E+ + ++ YY + +I
Sbjct: 398 KYHDDPQLK-------------RVQSAGKALLHHGAKIPAAKKAEMEKTLLDYYSDQTDI 444
Query: 708 SQEDLERALLV 718
+ E L +A V
Sbjct: 445 TDELLRQAARV 455
>gi|350403861|ref|XP_003486927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus impatiens]
Length = 609
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 30/210 (14%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
P+YHNC + A DG +LC CDRKK EWYLT+ L +++E P + L FEP GR + ++
Sbjct: 309 PLYHNCYLQAPDGEILCTCDRKKAEWYLTKGLGEVIEKEPLTVRLKFEPSGRALGQVGQY 368
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y Q K N CV CG + ++R ++P YR +FP +K+H+SHDI+LLC CHE+++
Sbjct: 369 YTQIKINQCVVCGTSDKFIRKNVVPREYRKYFPLVMKAHQSHDILLLCPSCHEISNYHDL 428
Query: 626 KYKKQISAEFGIPL---FIH----KVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMA 678
+ +++++ PL H V +SRK + V L+ RT
Sbjct: 429 QLRRKLADMCDAPLVGPLTHIRNKNVDNSRK-------------LHSAVKALRERT---- 471
Query: 679 LLHHGPTMPSNRREELRRIVMRYYGGREIS 708
T+P RR++L ++ ++++
Sbjct: 472 ------TLPDARRKDLEHYILECTNEKQVT 495
>gi|197116637|ref|YP_002137064.1| ribonuclease D [Geobacter bemidjiensis Bem]
gi|197085997|gb|ACH37268.1| ribonuclease D, putative [Geobacter bemidjiensis Bem]
Length = 377
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 136/274 (49%), Gaps = 27/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V + L+EL LS+E A D E SL + LIQ+S+ ED L+D +A D +
Sbjct: 16 VTDQKTLDELVERLSRESVLAFDLEADSLHHYTEKVCLIQVSSTSEDRLIDPLAPID-VK 74
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
+L P FA+P + K+FHG+D D+ L RDF I VVNLFDT A + L + + LA LL+
Sbjct: 75 VLAPIFANPAIKKIFHGADYDMRSLYRDFGIEVVNLFDTMIASQFLGESEFGLAALLKKR 134
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
GV +K Q+ DW +RP EML YA D L+ + + L AELKQ+G + +
Sbjct: 135 FGVELDKRYQKADWSKRPFSQEMLDYAMKDTSLLIELYRQLEAELKQKGRLAWVEEESEL 194
Query: 292 -NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
V SR +CL+ + + P E A V ++L+R
Sbjct: 195 VAGVRSPSREGELMCLR-FKGASKMKPRELA--------------------VLEELLR-- 231
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+RD AR+ D +LS+ + LA K P N
Sbjct: 232 --FRDEKARLADVPPFRILSNDLLRELAEKQPRN 263
>gi|253698875|ref|YP_003020064.1| 3'-5' exonuclease [Geobacter sp. M21]
gi|251773725|gb|ACT16306.1| 3'-5' exonuclease [Geobacter sp. M21]
Length = 377
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 136/274 (49%), Gaps = 27/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V + L+EL LS+E A D E SL + LIQ+S+ ED L+D +A D +
Sbjct: 16 VTDQKTLDELVERLSRESVLAFDLEADSLHHYTEKVCLIQVSSASEDRLIDPLAPID-VK 74
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
+L P FA+P + K+FHG+D D+ L RDF I VVNLFDT A + L + + LA LL+
Sbjct: 75 VLAPIFANPAIKKIFHGADYDMRSLYRDFGIEVVNLFDTMIASQFLGESEFGLAALLKKR 134
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
GV +K Q+ DW +RP EML YA D L+ + + L AELKQ+G + +
Sbjct: 135 FGVELDKRYQKADWSKRPFSQEMLDYAMKDTSLLIELYRQLEAELKQKGRLAWVEEESEL 194
Query: 292 -NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
V SR +CL+ + + P E A V ++L+R
Sbjct: 195 VAGVRSPSREGELMCLR-FKGASKMKPRELA--------------------VLEELLR-- 231
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+RD AR+ D +LS+ + LA K P N
Sbjct: 232 --FRDEKARLADVPPFRILSNDLLRELAEKQPRN 263
>gi|158523201|ref|YP_001531071.1| 3'-5' exonuclease [Desulfococcus oleovorans Hxd3]
gi|158512027|gb|ABW68994.1| 3'-5' exonuclease [Desulfococcus oleovorans Hxd3]
Length = 382
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 132/277 (47%), Gaps = 25/277 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V T S L ++ + L + AVD E SL F LIQI + +L+D +AL D
Sbjct: 9 FTFVNTPSGLAQVVHRLERVPVVAVDLEADSLHHFTEKVCLIQIGVNGDAFLIDPLALSD 68
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+S L+PFFADPGV KV HG+D DV L RDF I + LFD+ A L L ++
Sbjct: 69 -LSSLKPFFADPGVIKVLHGADYDVRSLYRDFGITITGLFDSEIASRFLGVQSTGLNDVV 127
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
GV +K +++DW QRPLP +ML YA D YL+ + L EL+Q G +
Sbjct: 128 NRRFGVTMDKGCRKQDWTQRPLPEKMLSYAALDVRYLVDLYHQLQNELQQMGRAEWVAEE 187
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ +L R +N GE + F+ G +S T ++
Sbjct: 188 CE---LLSRVRYAN---------------GEDTPLFVRFK------GAGRLSRRTLAVLE 223
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
L R MAR D V+ + A++ LA + P NR
Sbjct: 224 ALLVARQKMARKKDRPPFKVMGNDALLRLAQERPRNR 260
>gi|403368461|gb|EJY84065.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 547
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 152/289 (52%), Gaps = 20/289 (6%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIST-EKEDYLVDT 163
+ + +++T ++L E+ +L K VD E H +S+ GF LIQI+T + + YL+D
Sbjct: 78 KEGDYHYIDTPNKLQEILRSLYKYSVLGVDLENHQTKSYHGFLCLIQITTPDYQTYLIDC 137
Query: 164 IALHDEI-SILQPFFADPGVCKVFHGSDN-DVMWLQRDFHIYVVNLFDTAKACEVLSKPQ 221
+ L +EI + L F K+FHG N D+ WLQRDF VN+FDT ++ + L K Q
Sbjct: 138 LKLREEIKTYLGAIFESHTTLKIFHGCVNSDITWLQRDFGFATVNVFDTQESYKKLFKGQ 197
Query: 222 K-SLAYLLETYCG--VATNK----FLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+ SL +L TYC V +K Q+ DW RPL +EML YA D+HYL+YIAK L
Sbjct: 198 RVSLLHLWTTYCKDRVKISKEQKNMFQKADWSMRPLSSEMLNYAAHDSHYLIYIAKRL-- 255
Query: 275 ELKQQGNENSYCPDDKFNFVLEASRRSNTVCL-QVYTKEIESYPGEAAASSIFFRLLNGQ 333
Q+ EN ++ + + + N C+ Q++ ++ + + F ++L+G
Sbjct: 256 ---QKNFENQ----NQLQELADICNQVNIQCVSQLFKPRDITFNKDEEYKTPFRKILDGF 308
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
S +T+ + +R+ R+ +A++ D + + D + L+ K P
Sbjct: 309 DPESEEFLLTEYIFKRIYNLREHLAQIIDVTPSEICDDSMLYVLSKKRP 357
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 501 FSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGR--- 557
+SCK VY NC++ A DG LL CD KK +WY+ + L + + DNP I L+FEP GR
Sbjct: 436 YSCKKVVYENCKMVAPDGELLSNCDFKKAQWYIEKGLGEKISDNPFTIKLMFEPNGRGKA 495
Query: 558 -PEDE--GNEFYIQSKKN 572
P +E + FY+ ++N
Sbjct: 496 KPFEELYDDNFYVADREN 513
>gi|301060312|ref|ZP_07201175.1| putative ribonuclease D [delta proteobacterium NaphS2]
gi|300445508|gb|EFK09410.1| putative ribonuclease D [delta proteobacterium NaphS2]
Length = 381
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 136/285 (47%), Gaps = 25/285 (8%)
Query: 104 QRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT 163
+ ++ VE+ L + L KE AVD E S+ + L+Q ST ++ LVD
Sbjct: 3 EEGQDYLHVESGEALTSIVGILQKETAIAVDLEADSMFHYQEKVCLLQFSTPSKNILVDP 62
Query: 164 IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
+A+ D +S L P F G+CK+FHG+D D+ L RDF I V LFDT A L
Sbjct: 63 LAVKD-LSPLAPIFKSFGICKIFHGADYDIRSLYRDFKIEVNALFDTQIAARFLGLTDIG 121
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
LA LL+ + K Q++DW QRPLPA MLQYA D +L+ +A+ L EL + G
Sbjct: 122 LASLLQGKLNITLKKKYQKKDWSQRPLPAPMLQYAVHDTCHLIPLAQNLREELVKTG--- 178
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
+ FV E + TV + PG+ F NG G + S
Sbjct: 179 ------RLPFVEEECQLQTTVR--------SASPGDEP----LFLKFNGAGKLDRRSLA- 219
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
++ + +RD AR D L V+ + ++ALA + P T++
Sbjct: 220 --VLEAILQYRDRTARRRDVPLFKVMGNAQVMALAKQKPVRMTEL 262
>gi|328872413|gb|EGG20780.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
fasciculatum]
Length = 639
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 118/229 (51%), Gaps = 29/229 (12%)
Query: 507 VYHNCRIYANDGR-LLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEF 565
+Y NC ++A DG LLC +KK+EWYL+R+LA D+P I L F PKG E +++
Sbjct: 376 LYDNCLMFAQDGETLLCNISKKKVEWYLSRNLATKFCDDPIKIKLTFTPKGNGHAE-DKY 434
Query: 566 YIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAE 625
Y+ +K N C CG G +R+ I+P YR + P ++KSH SHD+VLLC DCH +
Sbjct: 435 YLSNKTNNCCVCGSGKQLMRHSIVPHSYRQYLPVRVKSHSSHDVVLLCCDCHLHVNRRIH 494
Query: 626 KYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHG-P 684
+ I+ E+GI + + E + L+L A L+H P
Sbjct: 495 LMRMMIANEYGIE-----------------YDTGADSMEIDMQILKLTKQAAVLMHAMYP 537
Query: 685 T-------MPSNRREELRRIVMRYYGGREISQEDLERALLVGMSPRERR 726
T +P+N+ EE ++ V ++ E++ EDL L +PR +R
Sbjct: 538 TSSKKSVQLPANKFEEFKKNVCQHLNKEELTLEDLTN--LANQNPRNKR 584
>gi|313234915|emb|CBY24860.1| unnamed protein product [Oikopleura dioica]
Length = 812
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 504 KSPVYHNC-RIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIM--LLFEPKGRPED 560
K P+Y+NC ++ A DG +L D+KK +WY+ + L +LVED + + L FEP GRP
Sbjct: 321 KEPLYNNCVKLLAPDGEVLSITDKKKADWYVKKGLGELVEDTETSFIVRLKFEPSGRPNT 380
Query: 561 EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVA 620
+ ++Y+ K+N+CV C E N LR ++P YR HFP +K H SHD+VLLC+ CH +
Sbjct: 381 DSEKYYVTEKENVCVVCNEKNGLLRKNVVPREYRKHFPIVMKCHVSHDVVLLCLRCHGRS 440
Query: 621 HAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALL 680
+ + +I+ +F PL AD KA P ++ R+ ALL
Sbjct: 441 NELDYLKRARIADKFVAPL---GNADLAKAILEPKERRNV------------RSGGNALL 485
Query: 681 HHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
+ +P R EL I+M Y+ + DLE+
Sbjct: 486 KNRAKLPEKRINELESIIMEYFNA-TVWTGDLEQ 518
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 867 HGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
HG++VV L+ G + ++ F WRQ F++ + P F+P GW++ H
Sbjct: 539 HGEKVVASLMLSGGIESVKNFEVDWRQHFLDTMDPQFMPEGWNIYH 584
>gi|373433349|emb|CCE67262.1| RRP6 protein, partial [Chironomus tentans]
Length = 133
Score = 133 bits (335), Expect = 4e-28, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 81/119 (68%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FA+D E H R++LG T L+QIST +DY++DTIAL +E+ +L F + K+FHGSD
Sbjct: 3 FALDVEHHRYRTYLGITCLMQISTRTKDYIIDTIALREELHVLNEIFTRSSIIKIFHGSD 62
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D+ WLQRD +YVVN+FDT +A + L + SLA+LL+ YC + +K Q DWR RP
Sbjct: 63 CDIEWLQRDLCLYVVNMFDTHQAAKRLGLARLSLAFLLKHYCNIEADKSFQLADWRIRP 121
>gi|21356549|ref|NP_650075.1| CG6744, isoform A [Drosophila melanogaster]
gi|386765579|ref|NP_001247048.1| CG6744, isoform B [Drosophila melanogaster]
gi|10726453|gb|AAF54639.2| CG6744, isoform A [Drosophila melanogaster]
gi|19528113|gb|AAL90171.1| AT25352p [Drosophila melanogaster]
gi|383292644|gb|AFH06366.1| CG6744, isoform B [Drosophila melanogaster]
Length = 583
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 30/246 (12%)
Query: 469 KNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKK 528
+++SNK+V K+ + RQ+A + ++D Y NC + A DG LLC DR+K
Sbjct: 277 QSKSNKWVPKK---QPYRQIATR-TKDF-----------YDNCLLQAPDGELLCTIDRRK 321
Query: 529 LEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRI 588
WYL ++L + + P + L FEP GR + FY KKN CV CG+ + Y+R +
Sbjct: 322 ASWYLNQNLGTHISEEPFTVRLNFEPAGRAVGDVGRFYQTIKKNQCVVCGDRDAYIRKNV 381
Query: 589 IPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSR 648
+P YR HFP +KSH S D++LLC CH++++ + + + +++ + P + S
Sbjct: 382 VPREYRKHFPLVMKSHTSDDVLLLCPTCHQLSNISDLRVRSKLAVQCEAPF--KQEDGSV 439
Query: 649 KAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREIS 708
K P ++++A ALLHHG +P+ ++ E+ + ++ YY +
Sbjct: 440 KYHDDPQLK-------------RVQSAGKALLHHGAKIPAAKKAEMEKTLLDYYSDQTDI 486
Query: 709 QEDLER 714
EDL R
Sbjct: 487 TEDLLR 492
>gi|303286107|ref|XP_003062343.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455860|gb|EEH53162.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 149
Score = 132 bits (331), Expect = 1e-27, Method: Composition-based stats.
Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 9/149 (6%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+V+T++ L +LA+ L FAVD E HS RSF GFT +IQ+ST + D++VD +AL ++
Sbjct: 1 YVDTEAALADLASHLDGVAEFAVDLEHHSYRSFRGFTCVIQVSTRERDFVVDALALRSKM 60
Query: 171 SI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL----- 224
L F D KV HG+D DV WLQRDF IYVVN+FDT +A VL P K L
Sbjct: 61 RAHLARHFEDATKQKVMHGADMDVQWLQRDFGIYVVNMFDTGQAARVLELPSKGLGAFYL 120
Query: 225 ---AYLLETYCGVATNKFLQREDWRQRPL 250
AY L+ +C V +K Q DWR+RPL
Sbjct: 121 TDAAYALKHFCDVDADKRYQLADWRRRPL 149
>gi|195156982|ref|XP_002019375.1| GL12271 [Drosophila persimilis]
gi|194115966|gb|EDW38009.1| GL12271 [Drosophila persimilis]
Length = 578
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 19/197 (9%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL ++L V +NP + L FEP GR E +Y
Sbjct: 296 YDNCLLQAPDGELLCTMDRRKASWYLAQNLGTKVSENPFTVRLNFEPAGRAVGEVGRYYQ 355
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG +R ++P YR HFP +KSH SHD++LLC CH++++ + +
Sbjct: 356 TPKENQCVVCGNREALIRKNVVPHQYRKHFPVVMKSHTSHDVLLLCPPCHQLSNISDLRV 415
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSP--LQLRTAAMALLHHGPT 685
+++A+ P F S N V P ++++AA ALL +G
Sbjct: 416 HCKLAAKCDAP-----------------FKHSEGNVRYHVDPELKRVKSAAKALLFNGHR 458
Query: 686 MPSNRREELRRIVMRYY 702
+P + EE+RR ++ YY
Sbjct: 459 IPEQKMEEMRRTLLDYY 475
>gi|198454637|ref|XP_001359658.2| GA19827 [Drosophila pseudoobscura pseudoobscura]
gi|198132885|gb|EAL28808.2| GA19827 [Drosophila pseudoobscura pseudoobscura]
Length = 578
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 19/197 (9%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL ++L V +NP + L FEP GR E +Y
Sbjct: 296 YDNCLLQAPDGELLCTMDRRKASWYLAQNLGTKVSENPFTVRLNFEPAGRAVGEVGRYYQ 355
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG +R ++P YR HFP +KSH SHD++LLC CH++++ + +
Sbjct: 356 TPKENQCVVCGNREALIRKNVVPHQYRKHFPVVMKSHTSHDVLLLCPPCHQLSNISDLRV 415
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSP--LQLRTAAMALLHHGPT 685
+++A+ P F S N V P ++++AA ALL +G
Sbjct: 416 HCKLAAKCDAP-----------------FKHSEGNVRYHVDPELKRVKSAAKALLFNGHR 458
Query: 686 MPSNRREELRRIVMRYY 702
+P + EE+RR ++ YY
Sbjct: 459 IPEQKMEEMRRTLLDYY 475
>gi|118379200|ref|XP_001022767.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89304534|gb|EAS02522.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 722
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 17/227 (7%)
Query: 428 NNVENLDDILLANLQKCLGPNGSCPL-SVFNYVLPAKNNWELKNQSNKFV--YKQNGVKV 484
N + L+D+ L Q P L S ++ N+W + N + Y + G K
Sbjct: 306 NKLALLEDLDLQTFQNIKYPQSLIFLQSQREKIMLILNSWNQSEEKNNLLQEYDKYGQKK 365
Query: 485 SRQVAKKASR-----DLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAK 539
+ +K R F ++F K Y NC+I + G LC CD KK++WYL + LA
Sbjct: 366 ASSHTEKEERKQKRAQQFEEQFCLKKEPYGNCQILSPLGLKLCNCDEKKVKWYLNKGLAT 425
Query: 540 LVEDNPPAIMLL-FEPKGRPEDE--------GNEFYIQSKKNICVSCGEGNHYLRYRIIP 590
LV P I+ L F+P G+ +E N+FY ++ +CV CG+ + +Y +IP
Sbjct: 426 LVSREPYTIIKLNFQPNGKNHEELEQEIHLNENQFYASKRETVCVVCGKDEKFTKYHVIP 485
Query: 591 SCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGI 637
S YR HFP + KSHRSHDI+LLCV CH+ A A+ K Q+ ++ I
Sbjct: 486 SIYRTHFPNKYKSHRSHDILLLCVKCHQKAGKNADLLKDQLLQQYKI 532
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 8/177 (4%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
+ ++ ++T ++L +L L ++ +DTEQ +++ GF LIQIST++ DYL+D + +
Sbjct: 23 EKYILIDTLNKLQDLIPILLEQTRLGIDTEQSFAKTYEGFLCLIQISTDQNDYLIDVLGI 82
Query: 167 HDEISI---LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QK 222
+ + I L F + K+F+ D++WL+RDF + VVN FD + L K
Sbjct: 83 NSKQGINECLSKVFLCKDIIKIFYAGQQDILWLKRDFDLSVVNYFDVKECASFLKKSDDN 142
Query: 223 SLAYLLETYCGVATN----KFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAE 275
SL L++ YC + K LQ +W RPL E L YA D+HYL+ I L+ E
Sbjct: 143 SLIQLIDRYCNYKLDKQKKKELQVSEWSNRPLSKEQLDYAALDSHYLIKIRYELLCE 199
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 868 GKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMHRI 914
G++VV+ L ED I F + WRQ F++ + P +LP GW+V H+
Sbjct: 642 GQKVVENLK---TEDDIILFIKMWRQHFLDVMQPKYLPFGWNVNHKF 685
>gi|195111972|ref|XP_002000550.1| GI22458 [Drosophila mojavensis]
gi|193917144|gb|EDW16011.1| GI22458 [Drosophila mojavensis]
Length = 595
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL ++L V + P + L FEP GR + +Y
Sbjct: 308 YDNCVLEAPDGELLCTIDRRKASWYLNQNLGTQVSEQPFTVRLNFEPAGRAVGDVGRYYQ 367
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG + Y+R ++P YR HFP +KSH SHDI+LLC CH++++ + K
Sbjct: 368 TPKENQCVVCGRRDAYIRKNVVPREYRKHFPVVMKSHTSHDILLLCPSCHQLSNISDNKI 427
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
+ +++ P G ++ + ++ A ALL MP
Sbjct: 428 RNKLAMTCEAPF---------------GHGEGVSKYHDDQQLRNVKLAGKALLMQSDRMP 472
Query: 688 SNRREELRRIVMRYYGG-REISQEDLERA 715
S + +L++ ++ YY EI+ E L++A
Sbjct: 473 SQKVAQLQKTILDYYKDVTEITPELLQKA 501
>gi|321451818|gb|EFX63353.1| hypothetical protein DAPPUDRAFT_35911 [Daphnia pulex]
Length = 143
Score = 130 bits (326), Expect = 5e-27, Method: Composition-based stats.
Identities = 62/133 (46%), Positives = 81/133 (60%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ V TK L L + VD E HS RS+ G T L+QISTEK DY++DT+ L D
Sbjct: 10 LIMVGTKEAFEHLLQDLLSQTVIGVDLEHHSYRSYRGITCLMQISTEKTDYIIDTLKLWD 69
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+ L F DP + K+F G+D+DV+WLQRDF IY+VNLF T +A +L +K L +LL
Sbjct: 70 HLQPLNKVFGDPNIVKIFQGADSDVIWLQRDFGIYIVNLFYTLQAASLLGFEKKGLPFLL 129
Query: 229 ETYCGVATNKFLQ 241
+ YC V NK Q
Sbjct: 130 QHYCQVHVNKKYQ 142
>gi|322417808|ref|YP_004197031.1| 3'-5' exonuclease [Geobacter sp. M18]
gi|320124195|gb|ADW11755.1| 3'-5' exonuclease [Geobacter sp. M18]
Length = 377
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V + L+EL LSKE A D E SL + LIQ+S+E E+ L+D +A D +
Sbjct: 16 VTDQKTLDELVERLSKESVLAFDLEADSLHHYTEKVCLIQVSSESENRLIDPLAPID-VR 74
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
+L P FA+P + K+FHG+D D+ L RDF I VVNLFDT A + L + + LA LL+
Sbjct: 75 VLAPIFANPAIKKIFHGADYDMRSLYRDFGIEVVNLFDTMIASQFLGESEFGLAALLKKR 134
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
GV +K Q+ DW +RP EML+YA D L+ + + L AEL +G
Sbjct: 135 FGVELDKRYQKADWSKRPFSQEMLEYAMKDTSLLIELYRQLEAELLAKG 183
>gi|406962736|gb|EKD89001.1| hypothetical protein ACD_34C00239G0001 [uncultured bacterium]
Length = 380
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 101 LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYL 160
+D+ VWV + L E AL + AVDTE +SL S+ LIQIS+ + D++
Sbjct: 1 MDIAPCKPAVWVNSSQGLTEAFQALESQSRIAVDTESNSLFSYQEKVCLIQISSPETDFV 60
Query: 161 VDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
D D +S+L F +P K+FH S+ D++ L+RD+H +N+FDT A +L P
Sbjct: 61 FDPFEFSD-LSLLGSLFQNPKQEKIFHASEYDLICLKRDYHFKFINIFDTMIASRILGAP 119
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
Q L LL+ Y + +K QR +W RPLP EML YA+ D +YL + L +EL G
Sbjct: 120 QVGLGSLLQNYFDINLDKKYQRANWGLRPLPPEMLDYARLDTYYLFKLRDRLESELSNHG 179
Query: 281 NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSIS 340
+ + F +A+ SN + + K L G G
Sbjct: 180 LLD--LAQEDFVNACKAAGHSNGNNQEAHWK------------------LAGSGHADP-R 218
Query: 341 SVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPA 383
VT +++ LC +RD AR D VLS+ ++ ++ PA
Sbjct: 219 QVT--ILKELCTYRDEQARKADLPHFKVLSNDMLVEVSLHRPA 259
>gi|195396214|ref|XP_002056727.1| GJ10057 [Drosophila virilis]
gi|194143436|gb|EDW59839.1| GJ10057 [Drosophila virilis]
Length = 591
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL + L + + P + L FEP GR + +Y
Sbjct: 304 YDNCVLEAPDGELLCTIDRRKASWYLNQKLGTQISEKPFTVRLNFEPAGRAVGDVGRYYQ 363
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG + YLR ++P YR HFP +KSH SHDI+LLC CH++++ + K
Sbjct: 364 TPKENQCVVCGRRDAYLRKNVVPREYRKHFPVVMKSHTSHDILLLCPSCHQLSNISDNKI 423
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
+ +++A P G ++ + ++ A ALL MP
Sbjct: 424 RNKLAATCEAPF---------------GHGEGVSKYHDDQQLRNVKCAGKALLLQSDRMP 468
Query: 688 SNRREELRRIVMRYY-GGREISQEDLERA 715
+ +L++ ++ YY EI+ E L++A
Sbjct: 469 IQKVAQLQKTILDYYTDTTEITPELLQKA 497
>gi|320159696|ref|YP_004172920.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
gi|319993549|dbj|BAJ62320.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
Length = 380
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+WV T + L + N L AVDTE + L ++ LIQ S DYLVD +A
Sbjct: 10 IWVATPTALRRMMNHLLACEQIAVDTESNGLHAYQEQICLIQFSVPGADYLVDPLA-SVN 68
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+S L F++PG+ KVFH ++ D++ L+RDF +LFDT A +L + + LA LLE
Sbjct: 69 LSGLNEIFSNPGIEKVFHAAEYDILCLKRDFGFTFTHLFDTMIAARILGRSEVGLAALLE 128
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ GV +K QR +W +RPLP ML YA+ D HYL+ + L EL ++G
Sbjct: 129 EHFGVTLDKRYQRANWARRPLPPAMLNYARLDTHYLIDLRNHLAKELAERG 179
>gi|330789845|ref|XP_003283009.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
gi|325087081|gb|EGC40462.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
Length = 662
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 32/256 (12%)
Query: 480 NGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAK 539
NG S + +F + +Y NC +Y+ + LLC +KK++WY++R LA
Sbjct: 360 NGASTSENGPRVKDSSIFRRMVPDNRVLYDNCLMYSPEDVLLCSISKKKVQWYVSRGLAD 419
Query: 540 LVEDNPP--AIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHF 597
+V + I L F+P G G+ +Y+ K+N CV CG LR+ ++P CYR +
Sbjct: 420 IVSGDSEQIKIKLRFKPNGEGH-SGDFYYLAHKENHCVVCGSTYKILRHSVVPHCYRQYL 478
Query: 598 PEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPL-FIHKVADSRKAEARPGF 656
PE++KSH SHD++LLC DCH + + I+ ++G+PL HKV
Sbjct: 479 PEEIKSHSSHDVLLLCCDCHATMEKRSHIMRMMIAKQYGVPLENDHKVY----------- 527
Query: 657 SASITNFEAGVSPLQLRTAAMALL-------HHGPTMPSNRREELRRIVMRYYGGREISQ 709
ITN SPL + A +L + +P ++ +E+++ ++ Y E +
Sbjct: 528 ---ITN-----SPLVKASKAALVLKKQIEGKNGKGQIPDSKLQEMKKEILDYLNKEEYTT 579
Query: 710 EDLERALLVGMSPRER 725
EDL+ LV +P++R
Sbjct: 580 EDLDS--LVSTNPKQR 593
>gi|289740869|gb|ADD19182.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 568
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 507 VYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFY 566
+Y NC + A DG LLC D++K EWYL + L +E P + L FEP R E +Y
Sbjct: 287 LYDNCLLQAPDGELLCTIDKRKAEWYLQQQLGVKIEAEPFTVRLNFEPASRAIGEVGRYY 346
Query: 567 IQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEK 626
K+N CV CG+ N ++R I+P YR +FP LKSH SHD++LLC CH++++ + K
Sbjct: 347 QTPKENRCVVCGDRNAFVRKNIVPREYRKYFPVVLKSHTSHDVLLLCPKCHQISNISDFK 406
Query: 627 YKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTM 686
+ ++S P H+ K P Q++ AA ALL+H +
Sbjct: 407 VRNKLSEMCDAPCNYHQKLP--KPAELPELR-------------QVKMAARALLNHAEQI 451
Query: 687 PSNRREELRRIVMRYYGGREISQEDLER 714
P RR+ L +V+ ++ E D+ R
Sbjct: 452 PLERRKYLETLVLNHFKESEDINWDMIR 479
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 867 HGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
HG++VV ++G G+++ + WRQ F+ + P +LP WDV H
Sbjct: 496 HGEKVVQKFQTDFG--GLKELEKLWRQHFLNTMEPKYLPPLWDVNH 539
>gi|219126108|ref|XP_002183306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405062|gb|EEC45006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 311
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 121/254 (47%), Gaps = 38/254 (14%)
Query: 56 VLADNSYSPFKHANKEKSSGSHPYELEITALLENPRPEFDFSNVDLDLQRSDSFV----W 111
+L D+ +P +H HPY+ E+T E+ + L S + W
Sbjct: 65 LLPDDLVAPHQHV-------PHPYQHELTHHSESAQRLPPPVVAPPPLTPPRSGILPATW 117
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK--------------- 156
++T + L L+ A+D E HS RSF G L+Q+S
Sbjct: 118 IDTVDEWRRLGERLAHVTEIALDLEAHSYRSFAGMVCLLQLSFRDHHYHDKDDHDTPNDN 177
Query: 157 ----------EDYLVDTIALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV 205
++L+DTI L ++ +L P +P V KV HG+D+D+ WLQRDF +Y+V
Sbjct: 178 DDTNDNSPTVHNFLIDTIVLKPYLNEVLLPVLTNPDVVKVLHGADSDIAWLQRDFGLYIV 237
Query: 206 NLFDTAKACEVLSKPQKSLAYLLETYC-GVATNKFLQREDWRQRPLPAEMLQYAQTDAHY 264
NLFDT +A L P+ S AY+L+ Y G+ +K Q DWR RPLP + QYA D Y
Sbjct: 238 NLFDTMRAARALKFPRASYAYVLQHYVDGLHADKSAQLADWRVRPLPEALQQYAIQDTAY 297
Query: 265 LLYIAKCLVAELKQ 278
LL I + +L Q
Sbjct: 298 LLDIYDRMRYDLSQ 311
>gi|313220222|emb|CBY31081.1| unnamed protein product [Oikopleura dioica]
Length = 597
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 114/218 (52%), Gaps = 23/218 (10%)
Query: 504 KSPVYHNC-RIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIM--LLFEPKGRPED 560
K P+Y+NC ++ A DG +L D+KK +WY+ + L +LVED + + L FEP GRP
Sbjct: 293 KEPLYNNCVKLLAPDGEVLSITDKKKADWYVKKGLGELVEDTETSFIVRLKFEPSGRPNT 352
Query: 561 EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRS----HDIVLLCVDC 616
+ ++Y+ K+N+CV C E N LR ++P YR HFP +K H S HD+VLLC+ C
Sbjct: 353 DSEKYYVTEKENVCVVCNEKNGLLRKNVVPREYRKHFPILMKCHVSREMRHDVVLLCLRC 412
Query: 617 HEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAA 676
H ++ + +I+ +F PL AD KA P ++ R+
Sbjct: 413 HGRSNELDYLKRARIADKFVAPL---GNADLAKAILEPKERRNV------------RSGG 457
Query: 677 MALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLER 714
ALL + +P R EL I+M Y+ + DLE+
Sbjct: 458 NALLKNRAKLPEKRINELESIIMEYFNA-TVWTGDLEQ 494
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 867 HGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
HG++VV L+ G + +++F WRQ F++ + P F+P GW++ H
Sbjct: 515 HGEKVVASLMTSGGIESVKKFEVDWRQHFLDTMDPQFMPEGWNIYH 560
>gi|242001434|ref|XP_002435360.1| 3-5 exonuclease, putative [Ixodes scapularis]
gi|215498690|gb|EEC08184.1| 3-5 exonuclease, putative [Ixodes scapularis]
Length = 587
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 109/204 (53%), Gaps = 21/204 (10%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDN--PPAIMLLFEPKGRPEDE 561
K+P+Y NC + A DG LC CD KK WY+ RDL K+V + P I L FEP RP +
Sbjct: 280 KTPLYDNCILQAPDGEALCTCDYKKAIWYIDRDLGKVVSEQGEPLVIRLNFEPSNRPVLD 339
Query: 562 GNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAH 621
+++YIQ+K N CV CG +R ++P YR FP+ +K H SHDI+LLCV CH++++
Sbjct: 340 -SQYYIQAKDNNCVVCGSAESLVRKNVVPHEYRKFFPKVMKHHISHDILLLCVRCHQLSN 398
Query: 622 AAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLH 681
+ ++ E P+ FS S+ N E ++R+AA ALL
Sbjct: 399 MRDMTLRYALAQECNAPIM------------DGTFSKSVENSEMR----KVRSAARALLM 442
Query: 682 HGPT--MPSNRREELRRIVMRYYG 703
H +P +R L ++ +YG
Sbjct: 443 HSRNNKLPQDRVALLLEVLKDHYG 466
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 844 VQNGFGSSSPTPNSKVSLLGHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHF 903
+ G S + ++KV + + PHG++VV++ + G+ F RWRQ F+E + P F
Sbjct: 470 LSEGHVSMAADIDTKVVNMDYVPHGERVVEHFKKN---GGLVHFELRWRQHFLETMKPKF 526
Query: 904 LPAGWDVMH 912
LPA W V H
Sbjct: 527 LPALWSVDH 535
>gi|224370825|ref|YP_002604989.1| Rnd [Desulfobacterium autotrophicum HRM2]
gi|223693542|gb|ACN16825.1| Rnd [Desulfobacterium autotrophicum HRM2]
Length = 377
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ +E L + L E A D E S+ F L+Q++ + ++VD +++ D
Sbjct: 4 YTLIENDEDLAARCDLLKTEKRLAFDLEADSMHHFKEKVCLVQMADPNDSFVVDPLSI-D 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
++S+L+P F DP + KVFHGSD D+ L RDF I+V NLFDT AC L ++SLA LL
Sbjct: 63 DLSVLKPVFEDPAITKVFHGSDFDIRSLDRDFDIHVNNLFDTEIACRFLGIQKRSLAALL 122
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
E + + +K Q+ DW +RPL EM+ Y+ D YLL ++ L L+ +G
Sbjct: 123 EKHFDLTLDKRFQKTDWSRRPLSKEMIAYSVNDVAYLLELSDILKKRLEDEG 174
>gi|383761955|ref|YP_005440937.1| ribonuclease D [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382223|dbj|BAL99039.1| ribonuclease D [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 395
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 22/218 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQIST------EKEDYLVDTIA 165
+ T S L L + L + FA+DTE +SL S+ G LIQIST E D+LVD +
Sbjct: 12 IYTTSSLRRLVDYLRGQPRFALDTESNSLYSYQGKVCLIQISTYATGKEEILDFLVDPLR 71
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
L D +S L DP + V H +DND++ L R + +FDT A +L Q LA
Sbjct: 72 LKD-LSPLGELLVDPAIEVVMHAADNDILMLYRSYGFRFGRVFDTQLAARILGWKQVGLA 130
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG----- 280
+LE + G+ +NK +QR DW +RPL E + YAQ D HYLL + L EL+++G
Sbjct: 131 AILEKHFGIVSNKRMQRTDWGKRPLTPEQIAYAQMDTHYLLPLRDRLAEELRRKGRWEEA 190
Query: 281 ----------NENSYCPDDKFNFVLEASRRSNTVCLQV 308
+ + PD++ + + A R CL V
Sbjct: 191 LDAFATLTSSDPATRMPDERTFWQMRAVRTVPQECLGV 228
>gi|194743424|ref|XP_001954200.1| GF18156 [Drosophila ananassae]
gi|190627237|gb|EDV42761.1| GF18156 [Drosophila ananassae]
Length = 586
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WY+ ++L + + P + L FEP GR E +Y
Sbjct: 304 YDNCFLQAPDGELLCTIDRRKATWYVDQNLGTRICEEPLTVRLNFEPAGRAVGEVGRYYQ 363
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG+ + YLR ++P YR HFP +KSH SHD++LLC CH++++ + +
Sbjct: 364 TPKENRCVVCGQSDAYLRKNVVPREYRRHFPVVMKSHTSHDVLLLCPSCHQLSNISDLRV 423
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
K +++ + P F H + F ++ +A ALL+HG +P
Sbjct: 424 KNKLAVQCDAP-FKH--------------CDGMVKFHDDPELKRVHSAGKALLYHGDKIP 468
Query: 688 SNRREELRRIVMRYYGGREISQEDLER 714
+ + +++ ++ +Y EDL R
Sbjct: 469 AAKVALMQQTLLDFYTECSEVTEDLLR 495
>gi|403371484|gb|EJY85623.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 1077
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 99/172 (57%), Gaps = 14/172 (8%)
Query: 109 FVWVETKSQL----NELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
F W++++ QL E+ LS +VD E H+L LIQIST +DY++D +
Sbjct: 831 FQWIDSQQQLEASIKEIKEELSHCNLLSVDIEYHNLAKHTCIVCLIQISTYSKDYVIDVL 890
Query: 165 ALHDEIS-ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK-PQK 222
+ ++ +Q F DP + K+FHG D+D+ L D I+VVNLFDTA+A + + K P+
Sbjct: 891 KTKEFVAQYIQEIFVDPSIVKIFHGCDSDIQILASDLDIFVVNLFDTARAYQAIFKLPEN 950
Query: 223 --------SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
SL L + + G+ +KF Q DWR RPLP M+ YA++D+H+L+
Sbjct: 951 APKHVDLTSLESLCDKFLGIQLDKFFQVSDWRIRPLPQGMMDYARSDSHFLI 1002
>gi|145536632|ref|XP_001454038.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421782|emb|CAK86641.1| unnamed protein product [Paramecium tetraurelia]
Length = 529
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Query: 497 FVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKG 556
F +KF+ PVY NCRIY+ G+ LC CD+KK+ WY+ L + +++ +I L F+P
Sbjct: 239 FQEKFTTHKPVYSNCRIYSLSGQQLCCCDQKKISWYVKNGLGEYLDEK--SIKLNFDPVC 296
Query: 557 RPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDC 616
+++ +FY + + N CV CG + L+Y+IIP Y+ + P KSHR+HD+V+LC C
Sbjct: 297 EFDEKEMKFYNEERSNRCVICGASTNILKYQIIPYMYKHYLPNHYKSHRAHDVVILCARC 356
Query: 617 HEVAHAAAEKYKKQISAEFGIPL 639
HE A A +K + +I+ + +PL
Sbjct: 357 HEKASAQQDKKRAEIAKLYEVPL 379
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
F +D E + R LIQIS KE YL D IAL+ E ++ FF + + K+F+
Sbjct: 17 FGIDIEFSNNR-----ICLIQISDGKEIYLFDPIALNLE-QYMREFFKNDAI-KIFYSGA 69
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA----TNKFLQREDWR 246
D+ WL+ ++ I V N D + +P SL L + YCGV K LQ+ DW
Sbjct: 70 QDLKWLKNEYQIVVNNYCDLKVLAQ--KEPDLSLIALWKKYCGVQFEREDKKRLQKSDWF 127
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAE 275
RPL E L YA D YL+ + + L+ +
Sbjct: 128 ARPLTEEQLFYAALDCKYLVVLREILLQQ 156
>gi|449274706|gb|EMC83784.1| Exonuclease 3'-5' domain-containing protein 2 [Columba livia]
Length = 607
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 129/250 (51%), Gaps = 35/250 (14%)
Query: 469 KNQSNKFVYKQ-NGVKVSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRK 527
K ++ K V Q +G + R ++ + L V + KSP+Y NC ++A DG+
Sbjct: 313 KTKNRKSVSGQPSGSQQVRDPRRQKRKPLGVGYSARKSPLYDNCFLHAPDGQ-------- 364
Query: 528 KLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYR 587
+ + + +L+ +P + L FEP GRPE + ++Y+ K+N+CV CG+ Y+R
Sbjct: 365 ----PVDKGIGELISTDPFVVKLRFEPSGRPESQ-VDYYLTVKENLCVVCGKRESYIRKN 419
Query: 588 IIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADS 647
I+P YR HFP Q+K H SHD++LLC CH +++ K+Q++ EFG P+
Sbjct: 420 IVPHEYRRHFPIQMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAEEFGAPI-------- 471
Query: 648 RKAEARPGFSASITNFEAGVSPL--QLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGR 705
G + E PL Q+R+ A ALL + ++P RR EL + + ++
Sbjct: 472 -------GSEEGVRLLE---DPLRRQVRSGARALL-NADSLPDPRRAELLQSIKDFFKTE 520
Query: 706 EISQEDLERA 715
++ E L+ A
Sbjct: 521 AVTPEMLQEA 530
>gi|427783841|gb|JAA57372.1| Putative 3-5 exonuclease [Rhipicephalus pulchellus]
Length = 599
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 120/217 (55%), Gaps = 25/217 (11%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLV--EDNPPAIMLLFEPKGRPEDE 561
K+P+Y NC + A DG L C+ KK++WY+ + L ++V +D P A+ L FEP RP +
Sbjct: 300 KTPLYDNCMLLAPDGEPLSSCNYKKVQWYVDKGLGRVVSRDDEPVAVQLNFEPSNRPVLD 359
Query: 562 GNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAH 621
+++Y Q+K N+CV C +R ++P YR +FPE +K+H SHDI+LLC+ CH++++
Sbjct: 360 -SQYYTQNKDNLCVVCNSKQSLVRKNVVPHEYRKYFPEIMKNHISHDILLLCLRCHQISN 418
Query: 622 AAAEKYKKQISAEFGIPL---FIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMA 678
++ ++ E P+ + KV D E R ++R+A A
Sbjct: 419 LRDGDLRRALAKECNAPIESGVLGKVLDD--PELR-----------------KVRSAGRA 459
Query: 679 LLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
L+ ++P +R E L ++ +++G E++ + + A
Sbjct: 460 LVKARKSLPQDRVELLEDVLRKHFGVDEVTDDVIRTA 496
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
PHG +VV++ G+ F RWRQ F++ + P ++PA W V H
Sbjct: 510 PHGFKVVEHY---KSSSGLVSFEMRWRQHFLDTMKPQYMPAMWSVDH 553
>gi|346470423|gb|AEO35056.1| hypothetical protein [Amblyomma maculatum]
Length = 609
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 19/214 (8%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLV--EDNPPAIMLLFEPKGRPEDE 561
K+P+Y NC + A DG L C+ KK+ WY+ R L +V +D P A+ L FEP RP +
Sbjct: 308 KTPLYDNCILQAPDGERLSSCNYKKVLWYVDRGLGTVVSGDDEPLAVQLNFEPSNRPVLD 367
Query: 562 GNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAH 621
+++YIQ+K NICV C +R ++P YR +FPE +K+H SHDI+LLC+ CH+V++
Sbjct: 368 -SQYYIQNKDNICVVCSSAQSLVRKNVVPHEYRKYFPEIMKNHISHDILLLCLRCHQVSN 426
Query: 622 AAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLH 681
+K ++ E P+ ++ +R+ ++R+A AL +
Sbjct: 427 LRDAALRKALAKECNAPIESGDISKAREDRLLR----------------KVRSAGRALSN 470
Query: 682 HGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
++P +R L ++ ++ E++ E ++ A
Sbjct: 471 ARGSLPEDRVTLLEDVLKEHFNVAEVTDEIIQNA 504
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
PHG++VV++ + G + RWRQ F++++HP ++P W V H
Sbjct: 518 PHGQRVVEHFKKTIG---LANLEMRWRQHFLDSMHPKYMPPLWSVDH 561
>gi|427797585|gb|JAA64244.1| Putative 3-5 exonuclease, partial [Rhipicephalus pulchellus]
Length = 614
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 120/217 (55%), Gaps = 25/217 (11%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLV--EDNPPAIMLLFEPKGRPEDE 561
K+P+Y NC + A DG L C+ KK++WY+ + L ++V +D P A+ L FEP RP +
Sbjct: 315 KTPLYDNCMLLAPDGEPLSSCNYKKVQWYVDKGLGRVVSRDDEPVAVQLNFEPSNRPVLD 374
Query: 562 GNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAH 621
+++Y Q+K N+CV C +R ++P YR +FPE +K+H SHDI+LLC+ CH++++
Sbjct: 375 -SQYYTQNKDNLCVVCNSKQSLVRKNVVPHEYRKYFPEIMKNHISHDILLLCLRCHQISN 433
Query: 622 AAAEKYKKQISAEFGIPL---FIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMA 678
++ ++ E P+ + KV D E R ++R+A A
Sbjct: 434 LRDGDLRRALAKECNAPIESGVLGKVLDD--PELR-----------------KVRSAGRA 474
Query: 679 LLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
L+ ++P +R E L ++ +++G E++ + + A
Sbjct: 475 LVKARKSLPQDRVELLEDVLRKHFGVDEVTDDVIRTA 511
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 866 PHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
PHG +VV++ G+ F RWRQ F++ + P ++PA W V H
Sbjct: 525 PHGFKVVEHY---KSSSGLVSFEMRWRQHFLDTMKPQYMPAMWSVDH 568
>gi|222053523|ref|YP_002535885.1| 3'-5' exonuclease [Geobacter daltonii FRC-32]
gi|221562812|gb|ACM18784.1| 3'-5' exonuclease [Geobacter daltonii FRC-32]
Length = 390
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ET+ LN L LS+E A D E SL + LIQ+S + L+D +A D +S
Sbjct: 23 IETQKDLNLLVEQLSRENILAFDLEADSLHHYTEKVCLIQVSNLSQTALIDPLAPVD-LS 81
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L P AD G+ KVFHG+D D+ L RDF + V N+FDT AC+ L + + LA L+
Sbjct: 82 PLAPVLADRGIRKVFHGADYDMRSLYRDFGLEVCNMFDTMIACQFLGEKEVGLAAALKKR 141
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
GV NK Q+ DW +RP AEM++YA+ D L+ + L EL+ +G
Sbjct: 142 FGVELNKKYQKADWSKRPFSAEMIEYAKMDTALLIRLYLQLEEELRAKG 190
>gi|195444614|ref|XP_002069948.1| GK11793 [Drosophila willistoni]
gi|194166033|gb|EDW80934.1| GK11793 [Drosophila willistoni]
Length = 598
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y NC + A DG LLC DR+K WYL ++L + + L FEP GR E +Y
Sbjct: 308 YDNCLLEAPDGELLCTIDRRKASWYLNQNLGTHIPGETFTVRLNFEPAGRAVGEVGRYYQ 367
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
K+N CV CG + Y+R ++P YR HFPE +KSH SHD++LLC CH++++ + +
Sbjct: 368 TPKENQCVVCGRRDAYIRKNVVPREYRRHFPEVMKSHTSHDVLLLCHTCHQLSNVSDLRI 427
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPL--QLRTAAMALLHHGPT 685
+ +++ + P F H + E P+ ++++A AL +
Sbjct: 428 RTKLATKCDAP-FKHGDGMVKCHE----------------DPILRRVKSAGKALTYQSER 470
Query: 686 MPSNRREELRRIVMRYYGG-REISQEDLERA 715
+P R+ EL +I++ YY EI+ E L+ A
Sbjct: 471 IPQARKAELHQILLDYYKDCNEITDELLKEA 501
>gi|404498237|ref|YP_006722343.1| ribonuclease D [Geobacter metallireducens GS-15]
gi|418065969|ref|ZP_12703338.1| 3'-5' exonuclease [Geobacter metallireducens RCH3]
gi|78195834|gb|ABB33601.1| ribonuclease D, putative [Geobacter metallireducens GS-15]
gi|373561476|gb|EHP87711.1| 3'-5' exonuclease [Geobacter metallireducens RCH3]
Length = 382
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 132/271 (48%), Gaps = 24/271 (8%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + LA+ LS+E + A D E S+ + LIQ + +VD +A+ D ++
Sbjct: 11 ITTPDGVRRLADRLSREPYVACDLEADSMHHYQEKVCLIQFTVPGLAAIVDPLAVAD-LA 69
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L P FA+P + KVFHG+D D+ L RDF I V NLFDT AC+ L + + LA +L
Sbjct: 70 PLAPVFANPSIRKVFHGADYDIRSLHRDFGIEVNNLFDTMIACQFLGEREFGLAAVLRKR 129
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
GV +K QR DW +RPL A M++YA D L+ + L AEL+++G +
Sbjct: 130 FGVELDKQYQRADWSRRPLTAGMIEYAAKDTTLLIELCGRLEAELREKG---------RI 180
Query: 292 NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLC 351
+V E L + + GE +F R G S ++S + ++ +
Sbjct: 181 GWVEE------ECALLARVRVAQRSDGE----PMFLRF----KGASRMASRSLAVLEEIL 226
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+RD A+ D VL + + LA K P
Sbjct: 227 CFRDRRAQQMDVPPFKVLGTETVRELAEKKP 257
>gi|145509024|ref|XP_001440456.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407673|emb|CAK73059.1| unnamed protein product [Paramecium tetraurelia]
Length = 733
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 85/143 (59%), Gaps = 6/143 (4%)
Query: 497 FVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKG 556
FV+K++ K P Y NC+IY + LC CD KK+ WYL + LA L+ ++PP I L F+P G
Sbjct: 422 FVEKYTRKKPAYGNCKIYTKENFFLCNCDEKKVRWYLKQGLADLISEDPPTIQLKFDPSG 481
Query: 557 RPEDEGN--EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCV 614
E+ + ++ + N CV CG+ N L++ I+P Y+ H ++ RS+D+V LC+
Sbjct: 482 FKEEGSDKAQYVTIERVNQCVICGKENELLKFHIVPVVYKKH----IQGKRSYDVVCLCL 537
Query: 615 DCHEVAHAAAEKYKKQISAEFGI 637
CH A A +K K I+ ++ I
Sbjct: 538 TCHHKASALNDKLKATIAEKYNI 560
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
S F ++ +++LN+ S VD E + F G +++QI +++ Y++D I
Sbjct: 38 SKLFKYISNENELNQFQLKGS---IIGVDIEHTNDIGFDGQISIVQIKDDEDVYIIDVIE 94
Query: 166 L----HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ 221
+ I++ + F D + KVF+ DV+WL+RDF I + N FD + + +
Sbjct: 95 IGVDNQKLINVFKQIFEDDKIIKVFYAGSTDVLWLKRDFQITIQNFFDIKEVADECKLSK 154
Query: 222 KSLAYLLETYCGVATNKF----LQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
SL +L + YC +K +Q DW +RPL E L YA D +YL Y+ L+ EL
Sbjct: 155 ISLIFLWKQYCDHQVSKSYKTNMQTSDWAERPLTQEQLIYAAYDCYYLPYLRYVLLEEL 213
>gi|145544186|ref|XP_001457778.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425596|emb|CAK90381.1| unnamed protein product [Paramecium tetraurelia]
Length = 389
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 12/183 (6%)
Query: 459 VLPAKNNWELKNQSNKFVYKQNGVKVSRQVAKKASRDL----------FVQKFSCKSPVY 508
+LP K +K Q Q + + Q+ KK D F +KF+ PVY
Sbjct: 191 LLPQKIYRHIKFQDPFQTDDQKVIGLIEQLTKKHHEDYKEQKKQRFLHFQEKFTTHKPVY 250
Query: 509 HNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQ 568
NCRI++ G+ LC+CD+KK+EWY+ L + +++ +I L F+P +++ +FY +
Sbjct: 251 SNCRIFSLSGQQLCFCDQKKIEWYVKNGLGEYMDEK--SIKLSFDPVCEFDEKEMKFYNE 308
Query: 569 SKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYK 628
+ N CV CG ++ L+Y+IIP Y+ + P KSHR+HD+V++C CHE A A +K +
Sbjct: 309 ERANRCVVCGASSNILKYQIIPYMYKHNLPNHYKSHRAHDVVIICARCHEKASALQDKKR 368
Query: 629 KQI 631
++
Sbjct: 369 AEV 371
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
F +D E + R LIQIS KE YL D IAL+ E ++ FF + + K+F+
Sbjct: 17 FGIDIEFSNKR-----ICLIQISDGKEIYLFDPIALNLE-QYMRDFFQNDAI-KIFYSGA 69
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA----TNKFLQREDWR 246
D+ WL+ ++ I V N D + +P +SL L + YCGV K LQR DW
Sbjct: 70 QDLKWLKTEYQIEVNNYCDLKVLAQ--KEPDQSLIALWKKYCGVQFERDDKKRLQRSDWF 127
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
RPL E L YA D +L+ + L+ + ++
Sbjct: 128 ARPLSQEQLFYAALDCKHLIMLRDILLQQYTEE 160
>gi|32564304|ref|NP_871964.1| Protein CRN-3, isoform b [Caenorhabditis elegans]
gi|26985796|emb|CAD59140.1| Protein CRN-3, isoform b [Caenorhabditis elegans]
Length = 594
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 43/241 (17%)
Query: 3 KKAKIKIAITIASLAA-ISILFTRQQRRRRKLNQCPQYSCYLQSEPKPQHNFKRVLADNS 61
+K + +++ + + +A I + + R RR + + + KPQ + + +DNS
Sbjct: 149 RKTEAEVSAAMRTFSANIGTVLAEKFRERR------EEAAQMVVLEKPQKTYN-ISSDNS 201
Query: 62 YSPF------KHANKEKSSG-----------------------SHPYELEITALLENPRP 92
+PF KH EK +G HPY I +L P
Sbjct: 202 QAPFSSKLTVKHHAIEKRTGIVLHDDDESGRRDWISAETETEEEHPY---IAEILHFKVP 258
Query: 93 EFDFSNVD---LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
E + + + ++TK +L L L+ FAVD E H +RS+LG T L
Sbjct: 259 EAQLKSAECLKFTALKDTPLTMIDTKEKLEALTKTLNSVKEFAVDLEHHQMRSYLGLTCL 318
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQIST ED+++D + D + +L FA+P + KVFHGSD+DV+WLQRD+ ++VVNLFD
Sbjct: 319 IQISTRDEDFIIDPFPIWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVHVVNLFD 378
Query: 210 T 210
T
Sbjct: 379 T 379
>gi|13278238|gb|AAH03952.1| Exosc10 protein, partial [Mus musculus]
Length = 517
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 196 LQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
LQ+DF +YVVN+FDT +A +L+ + SL +LL YCGV +NK Q DWR RPLP EML
Sbjct: 5 LQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEML 64
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEI-- 313
YA+ D HYLLYI + EL ++GN + V + RS +CL+ + K I
Sbjct: 65 SYARDDTHYLLYIYDRMRLELWERGNHQPV----QLQVVWQ---RSRDICLKKFVKPIFT 117
Query: 314 -ESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQ 372
ESY L Q ++S + L AWRD AR DES +VL +
Sbjct: 118 DESY----------LELYRKQK--KHLNSQQLTAFQLLFAWRDKTARREDESYGYVLPNH 165
Query: 373 AIIALANKAP 382
++ +A + P
Sbjct: 166 MMLKIAEELP 175
>gi|408418343|ref|YP_006759757.1| ribonuclease D Rnd [Desulfobacula toluolica Tol2]
gi|405105556|emb|CCK79053.1| Rnd: ribonuclease D [Desulfobacula toluolica Tol2]
Length = 377
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 140/276 (50%), Gaps = 27/276 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ ++E++S+LN + + L KE AVD E S+ F LIQI++ KE +LVD +
Sbjct: 2 NYKFIESESELNHVCDDLLKEKIIAVDLEADSMHCFKEKICLIQIASAKEAFLVDPFEIK 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
+IS + V KVFHGSD D+ L RD+H+ V NLFDT AC L ++ LA L
Sbjct: 62 -KISSFLNVLENNDVMKVFHGSDFDIRSLDRDYHVQVNNLFDTEIACRFLGIKERGLAAL 120
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
L+ V +K Q+ DW QRPL M++Y+ D YL+ + + LK++
Sbjct: 121 LKRNFDVDADKKFQKVDWAQRPLKQAMIEYSVGDVAYLVELQDIIHGRLKEKKR------ 174
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSIS-SVTQDL 346
L ++ + QV + ++P F+ G G + + S +V ++L
Sbjct: 175 -------LAWAKEEFEIQAQVRYENNHTFP--------LFKKFKGAGKMDNRSLAVLENL 219
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
++ R +A+ D+ L V+S+ +++ +A + P
Sbjct: 220 LQ----MRLSIAQKKDQPLFKVISNPSLMTMACEKP 251
>gi|218779802|ref|YP_002431120.1| 3'-5' exonuclease [Desulfatibacillum alkenivorans AK-01]
gi|218761186|gb|ACL03652.1| 3'-5' exonuclease [Desulfatibacillum alkenivorans AK-01]
Length = 388
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 25/276 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
FV V+ + L +L +L + AVD E S+ + L+QI++ +Y+VD + D
Sbjct: 15 FVLVDNDNALADLTQSLQSQKCIAVDLEADSMFHYQEKACLLQITSNGLNYIVDPLCDCD 74
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
+ L P + + K+FHG+D DV L RDF I + NLFDT A L +PQ LA LL
Sbjct: 75 -VKALAPILENDEIQKIFHGADYDVRCLFRDFGIELHNLFDTQVAARFLGEPQTGLAPLL 133
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
E+ GV K Q+++W RPLP EM+ YA D +LL +A+ L EL ++
Sbjct: 134 ESRFGVQLEKKYQKKNWSLRPLPPEMMAYAANDTVHLLELAEILKKELVEK--------- 184
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D+ +V E ++ T + P +F R G + + ++
Sbjct: 185 DRLFWVEEEC--------EILT---HARPMPPNDGPLFLRF----RGAGKLDPRSLQVLE 229
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ RD +A+ + L VL + I+ +A K P N
Sbjct: 230 NILHVRDDLAKKWNRPLFKVLGNTPILEMAQKRPLN 265
>gi|290987283|ref|XP_002676352.1| predicted protein [Naegleria gruberi]
gi|284089954|gb|EFC43608.1| predicted protein [Naegleria gruberi]
Length = 417
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 25/199 (12%)
Query: 508 YHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYI 567
Y + +Y++D LL +++K WYL + LA+ + +N +I L+F PKG + ++FY+
Sbjct: 134 YDDLNLYSDDMVLLAKIEQRKFNWYLKKGLAEQINEN--SIKLMFRPKGYGHKD-DDFYL 190
Query: 568 QSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKY 627
+NICV+CG R+ II YR H PE ++SH SHD+ LLC CHE A K
Sbjct: 191 SKMENICVACGVDKELTRHHIISFEYRKHMPEFVRSHSSHDVCLLCAHCHEKYETEAFKL 250
Query: 628 KKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMP 687
+KQIS ++G PL G + N + + + AA A+L MP
Sbjct: 251 RKQISEKYGSPL---------------GGVGMVKNVDFASA----KKAANAILKSKDKMP 291
Query: 688 SNRREELR---RIVMRYYG 703
+NR EEL RI ++ G
Sbjct: 292 ANRVEELEYELRIFIKSCG 310
>gi|339243881|ref|XP_003377866.1| putative 3'-5' exonuclease [Trichinella spiralis]
gi|316973270|gb|EFV56889.1| putative 3'-5' exonuclease [Trichinella spiralis]
Length = 535
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 33/232 (14%)
Query: 500 KFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLV---------------EDN 544
+F+ K P Y NC + DG LL +KKL WY+ +L +V ED
Sbjct: 258 RFALKGPHYQNCILIGPDGDLLSRLPKKKLMWYVKNNLGDVVSQLSDEHWKLFSCAEEDP 317
Query: 545 PPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSH 604
P + L F+PK E +YI+ K+N CV CG + +R RIIP YR FPE+LKS
Sbjct: 318 PFVVQLRFQPKVVASKES--YYIKEKENQCVVCGRLDLLMRKRIIPHLYRRLFPEELKSF 375
Query: 605 RSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFE 664
RSHDI+LLC DCH A +++ ++ + PL R AE + +
Sbjct: 376 RSHDILLLCFDCHRKAEYYDTLFQRSLAEQCDAPL--------RLAEQQED--------K 419
Query: 665 AGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERAL 716
++R A L H +P +RRE L++ + ++ + + +E+A+
Sbjct: 420 FSKDAFKIRGYARTLKFHFDQLPDDRREYLQKQLALFFQQDKFQLDLIEKAI 471
>gi|281204580|gb|EFA78775.1| 3'-5' exonuclease domain-containing protein [Polysphondylium
pallidum PN500]
Length = 717
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 507 VYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFY 566
+Y NC +Y DG LLC +KK++WYL R+L + +NP +I L F PKG + + +Y
Sbjct: 398 LYDNCPLYGPDGTLLCNVSKKKVQWYLERNLGVITCENPLSIKLTFTPKGNGHAD-DAYY 456
Query: 567 IQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEK 626
+ K+N CV CG LR+ I+P YR + P ++KSH SHD+V+LC +CH +
Sbjct: 457 LSHKENRCVVCGTTKKILRHSIVPHSYRQYLPVEIKSHSSHDVVILCSECHFTMNKRLHF 516
Query: 627 YKKQISAEFGIPL 639
K I+ ++ +P
Sbjct: 517 MKLVIADQYNVPF 529
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 147 TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV-- 204
ALIQIST + YL+ + L DP + KV + D + ++F+I
Sbjct: 192 VALIQISTATDAYLLQMTQMSRIPKSLIAILTDPRILKVGVAINQDATTIFKNFNILTKG 251
Query: 205 -VNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAH 263
V+L A+ SLAY C + N ++ W L AE + YA DA
Sbjct: 252 CVDLVPLARLTNYAGNGLASLAYSTLNGCNLDKNHLVRCSHWELATLSAEQIHYAACDAW 311
Query: 264 YLLYIAKCLVAELKQQGNENSYCPDD 289
L I ++ ++ N CPD+
Sbjct: 312 ISLAIYTQMLQTYRR--NRALSCPDE 335
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 867 HGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGW 908
H KQV+D +L + G++GI++F + WR+ FVE + P FL W
Sbjct: 673 HEKQVMDKVLAD-GDEGIKKFIRAWRRNFVETVQPKFLNEHW 713
>gi|39995551|ref|NP_951502.1| ribonuclease D [Geobacter sulfurreducens PCA]
gi|39982314|gb|AAR33775.1| ribonuclease D, putative [Geobacter sulfurreducens PCA]
Length = 381
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + LA+ L E A D E S+ + LIQ + +VD +A D IS
Sbjct: 11 ITTVDGVRRLADRLGSEPIVACDLEADSMHHYQEKVCLIQFAVPGYAAIVDPLAAPD-IS 69
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L P FA+ + KVFHG+D D+ L RDF I V NLFDT AC++L + + LA L
Sbjct: 70 PLAPLFANAAIRKVFHGADYDIRSLHRDFGIEVNNLFDTMIACQLLGEREFGLAAQLRKR 129
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
GV +K QR DW +RPL M++YA D L+ + + LVAEL+++G
Sbjct: 130 FGVELDKQYQRADWSRRPLTVGMIEYAVKDTTLLIELYRQLVAELEEKGRRG 181
>gi|21397264|gb|AAM51828.1|AC105730_2 Putative nucleolar protein [Oryza sativa Japonica Group]
gi|22773226|gb|AAN06832.1| Putative nucleolar protein [Oryza sativa Japonica Group]
Length = 523
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 97/176 (55%), Gaps = 15/176 (8%)
Query: 47 PKPQHNFKRVLADNSYSPFKHANKEKSS-GSHPYELEITALLENPRPEFDFSNVD----- 100
P+PQ + + +N PF H E++ GS P I L + P +F NV
Sbjct: 81 PRPQDVYA-IRVNNYNVPFDHVWLERTEDGSRP----IHPLEKLPMEQFIDRNVPESEPV 135
Query: 101 --LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
DL+ + F VE K+ L +LA L FAVD E + RSF G T L+QIST ED
Sbjct: 136 KPADLEDT-PFTLVEDKNGLADLAKKLKSVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 194
Query: 159 YLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKA 213
++VDT+ L I + L+ F DP KV HG+D D+MWLQRDFHIYV NLFDT +
Sbjct: 195 FVVDTLKLRIYIGLYLKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNLFDTGQV 250
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 25/137 (18%)
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
+ +RSN +CLQ+Y KE+ + + + Q + + +V L WRD
Sbjct: 249 QVQKRSNEICLQLYEKEL-------LTDTSYLHIYGLQE--HDLDAKQLAVVYALHQWRD 299
Query: 356 LMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSSLPSPSPVV 415
+AR DES +VL ++A+I +A K P D L + S P V
Sbjct: 300 YIAREVDESTGYVLPNKALIEIAKKMP----------------TDTAELKRMVKSKYPFV 343
Query: 416 CSHLDDVERQVCNNVEN 432
+LD V + N E+
Sbjct: 344 DENLDQVVGIIWNATES 360
>gi|404491882|ref|YP_006715988.1| ribonuclease D [Pelobacter carbinolicus DSM 2380]
gi|77544021|gb|ABA87583.1| ribonuclease D, putative [Pelobacter carbinolicus DSM 2380]
Length = 375
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 121 LANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
LA L E AVD E SL S+ L+QIST LVD +A+ D ++ L P ADP
Sbjct: 16 LAQELRDEAVIAVDLEADSLHSYQEKVCLLQISTSTRTVLVDPLAVED-LAALAPVLADP 74
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
+ K+FH +D D+ L RDF I V LFDT AC++L + + LA +L Y V +K
Sbjct: 75 TIRKIFHAADYDIRCLFRDFRIEVQGLFDTMIACQMLGEKRVGLADVLAKYLDVELDKRY 134
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
QR DW +RPL M+ YA D +L + + L L+ G
Sbjct: 135 QRADWSKRPLEEGMILYAMEDTCHLHRLTEILEGRLRDMGR 175
>gi|148266297|ref|YP_001233003.1| 3'-5' exonuclease [Geobacter uraniireducens Rf4]
gi|146399797|gb|ABQ28430.1| 3'-5' exonuclease [Geobacter uraniireducens Rf4]
Length = 409
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+E + LN L L+ E A D E SL + LIQ+ST E L+D +A D +S
Sbjct: 39 IEDQQALNRLVERLNTETTLAFDLEADSLHHYTEKVCLIQVSTNSETALIDPLAPLD-LS 97
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L P A+P V KVFHG+D D+ L RDF V NLFDT A + L + + LA L+
Sbjct: 98 PLAPILANPAVRKVFHGADYDMRSLYRDFGFEVRNLFDTMIASQFLGEKEVGLAAALKKR 157
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
GV +K Q+ DW +RP +M++YA D L+ + L EL+ +G +
Sbjct: 158 FGVELDKKYQKADWSKRPFSPQMIEYAMKDTSLLIKLYLQLEDELRAKG---------RL 208
Query: 292 NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLC 351
+V E S C++ +++ E +F R G + + + ++ +L
Sbjct: 209 AWVEEES--EIVSCVRAASRDNE---------PLFLRF----KGAAKLKPRSLAVLEKLL 253
Query: 352 AWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+RD AR D +L ++ + LA P D+
Sbjct: 254 LFRDERARKRDVPPFRILGNEPLRELAELLPRTAADL 290
>gi|391335538|ref|XP_003742147.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Metaseiulus occidentalis]
Length = 744
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 507 VYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFY 566
VY N + A DG +LC D K++WYL LA L ++PP I L FEP+ R G EFY
Sbjct: 297 VYKNAVMKAPDGEMLCNTDDVKVDWYLKMKLATLESEDPPVIRLNFEPRCRA-ILGGEFY 355
Query: 567 IQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEK 626
I+ K+NICV CG + L+ ++P YR FPE +KSH SHD VL+CV C + +
Sbjct: 356 IEEKRNICVVCGADDLLLKKNVVPLEYRKRFPELMKSHTSHDSVLICVSCQHRSTRHDAE 415
Query: 627 YKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTM 686
+ ++ E I + A + N L+ AA AL G +
Sbjct: 416 LRAKLDTECPIDV-----------------QAPMMN--------SLKRAARALKTAGGKL 450
Query: 687 PSNRREEL 694
P +RR E
Sbjct: 451 PESRRIEF 458
>gi|431904510|gb|ELK09893.1| Exonuclease 3'-5' domain-containing protein 2 [Pteropus alecto]
Length = 253
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 18/179 (10%)
Query: 537 LAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIH 596
L++LV + P + L FEP GRPE G+ +Y+ K+N+CV CG+ + Y+R +IP YR H
Sbjct: 16 LSELVSEEPFVVRLQFEPAGRPESPGD-YYLMVKENLCVVCGKKDSYIRKNVIPHEYRKH 74
Query: 597 FPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGF 656
FP ++K H SHD++LLC CH +++ K+Q++ EF P+ G
Sbjct: 75 FPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFEAPI---------------GS 119
Query: 657 SASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+ E Q+R+ A ALL + ++P++R+EEL + + +Y ++ E L+ A
Sbjct: 120 EEGLRLLE-DPERRQVRSGARALL-NAESLPAHRKEELLQALREFYNTDMVTDEMLQEA 176
>gi|85860425|ref|YP_462627.1| ribonuclease D [Syntrophus aciditrophicus SB]
gi|85723516|gb|ABC78459.1| ribonuclease D [Syntrophus aciditrophicus SB]
Length = 339
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 26/274 (9%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
+S++WV++++++ E L ++DTE S+ F L+Q+ K Y+ D
Sbjct: 54 NSWMWVDSEAKVEEAREDLDSSSLISLDTEYDSMHYFREKLCLVQVRASKRTYVFDPFNG 113
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
D + L+P+FADP + KV H DND+ L+RD+ N+FDT +A +L +L+
Sbjct: 114 ID-LQFLRPYFADPRLLKVTHAGDNDIRILKRDYGFEFRNIFDTHRAAHMLGSQYLALSS 172
Query: 227 LLETYCGVATNKF--LQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
++E Y GV K +QR W RPL L+YA D YL + + L +L +G +
Sbjct: 173 IIEQYLGVEIEKTKKMQRSKWEARPLSEGQLRYAVQDTAYLADLYRHLNEKLSLKGMQER 232
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
F V S R T+ L + + G +S+++ ++
Sbjct: 233 --ARKVFENVAAVSWREKTLDLLGHRR---------------------ISGYASLTADSK 269
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+++L WR AR + ++ +L D A+++L+
Sbjct: 270 GRLKKLYRWRFHKARQTNRAMFLILPDSALLSLS 303
>gi|220917449|ref|YP_002492753.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955303|gb|ACL65687.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
Length = 288
Score = 108 bits (269), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S V+V L+ L +AL+ E A+DTE +S + L+Q+ST +D++VD I++
Sbjct: 8 SPVFVSDPDALSRLLDALAGERVLALDTESNSFHVYRERVCLLQLSTRAQDFVVDPISV- 66
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
++ L D G V HG+D DV L R++ + LFDT A L +P L+ L
Sbjct: 67 -DVRPLGEILCD-GREVVLHGADYDVRCLHREYGWRIPRLFDTMIAARRLGRPGLGLSAL 124
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+E + GV +K QR DW +RPL + L YA D H+LL + L EL +G
Sbjct: 125 VEAHFGVRLSKAFQRSDWGRRPLTPDQLAYASLDTHFLLPLFDLLTGELATRG------- 177
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG-----GVSSISSV 342
LE + + + V +E R+ + +G G + +
Sbjct: 178 ------ALEEAWKESQRIASVVARE---------------RVFDPEGWRRIKGSRELDAP 216
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+ ++R L R+ AR D VL + A++ +A + PA R
Sbjct: 217 GKAVLRALWIAREDRARASDRPPFKVLGEPAMLEIARRRPATR 259
>gi|118582016|ref|YP_903266.1| 3'-5' exonuclease [Pelobacter propionicus DSM 2379]
gi|118504726|gb|ABL01209.1| 3'-5' exonuclease [Pelobacter propionicus DSM 2379]
Length = 382
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 104 QRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDT 163
QR+ + + +L E+A +++ E AVD E SL + LIQIST E +L+D
Sbjct: 6 QRAGACEMITDGGRLAEVAGSINSEREVAVDLEMDSLHHYREKVCLIQISTRTESWLIDP 65
Query: 164 IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
+AL D +S L + + V HG+D D+ L RD I V NLFDT A +L +
Sbjct: 66 LALKD-LSPLAAPLGNRDILIVMHGADYDIRSLHRDHGIEVTNLFDTMIASRLLGITEFG 124
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
LA LL+ G+ NK Q+ DW +RPL EM YA D LL + L EL ++G
Sbjct: 125 LAALLKARFGIELNKKYQKADWSKRPLSPEMRAYAVADTADLLRLYDMLRDELLEKGR 182
>gi|197122666|ref|YP_002134617.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
gi|196172515|gb|ACG73488.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
Length = 288
Score = 107 bits (268), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S V+V L+ L +AL+ E A+DTE +S + L+Q+ST +D++VD I++
Sbjct: 8 SPVFVSDPDALSRLLDALAGERVLALDTESNSFHVYRERVCLLQLSTRAQDFVVDPISV- 66
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
++ L D G V HG+D DV L R++ + LFDT A L +P L+ L
Sbjct: 67 -DVRPLGEILCD-GREVVLHGADYDVRCLHREYGWRIPRLFDTMIAARRLGRPGLGLSAL 124
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+E + GV +K QR DW +RPL + L YA D H+LL + L EL +G
Sbjct: 125 VEAHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLFDLLTGELATRG------- 177
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG-----GVSSISSV 342
LE + + + V +E R+ + +G G + +
Sbjct: 178 ------ALEEAWKESQRIASVVARE---------------RVFDPEGWRRIKGSRELDAP 216
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+ ++R L R+ AR D VL + A++ +A + PA R
Sbjct: 217 GKAVLRALWIAREDRARASDRPPFKVLGEPAMLEIARRRPATR 259
>gi|86158027|ref|YP_464812.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774538|gb|ABC81375.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
Length = 294
Score = 107 bits (268), Expect = 2e-20, Method: Composition-based stats.
Identities = 84/283 (29%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S V+V L L +AL+ E A+DTE +S + L+Q+ST +D++VD I++
Sbjct: 12 SPVFVSDPDALTRLLDALAGERVLALDTESNSFHVYRERVCLLQLSTRTQDFVVDPISV- 70
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYL 227
++ L D G V HG+D DV L R++ + LFDT A L +P L+ L
Sbjct: 71 -DVRPLGEILCD-GREVVLHGADYDVRCLHREYGWRIPRLFDTMIAARRLGRPGLGLSAL 128
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+E++ GV +K QR DW +RPL + L YA D H+LL + L EL +G +
Sbjct: 129 VESHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLFDLLTGELAARGALD---- 184
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG-----GVSSISSV 342
EA + S + V +E R+ + +G G + +
Sbjct: 185 --------EAWKESQRIA-SVVARE---------------RVFDPEGWRRVKGARELDAP 220
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
+ ++R L R+ AR D VL + A++ +A + PA R
Sbjct: 221 GKAVLRALWIAREERARASDRPPFKVLGEPAMLEIARRRPATR 263
>gi|409910998|ref|YP_006889463.1| ribonuclease D [Geobacter sulfurreducens KN400]
gi|298504558|gb|ADI83281.1| ribonuclease D, putative [Geobacter sulfurreducens KN400]
Length = 381
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + LA+ L +E A D E S+ + LIQ + +VD +A D IS
Sbjct: 11 ITTVDGVRRLADRLGREPIVACDLEADSMHHYQEKVCLIQFAVPGYAAIVDPLAAPD-IS 69
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L P FA+ + KVFHG+D D+ L RDF + V NLFDT AC++L + + LA L
Sbjct: 70 PLAPLFANAAIRKVFHGADYDIRSLHRDFGMEVNNLFDTMIACQLLGEREFGLAAQLRKR 129
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
GV +K QR DW +RPL M++YA D L+ + L +L+ +G
Sbjct: 130 FGVELDKQYQRADWSRRPLTPGMIEYAVKDTTLLIELCWQLATDLEAKGRRG 181
>gi|118348280|ref|XP_001007615.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89289382|gb|EAR87370.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 964
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Query: 121 LANALSKEFFFAVDTEQHSLRS--FLGFTALIQISTEKEDYLVDTIALHDEISIL--QPF 176
L + K F +D E +S LGF IQIST D+++D +AL ++I+ L +
Sbjct: 765 LKEEIEKNSIFGIDLEYYSENKDKNLGFVCTIQISTVNMDFMIDAMALRNQINQLLNKSL 824
Query: 177 FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK--SLAYLLETYCGV 234
F + K+ HG +ND+ WL+ DF I +VNLFDT A ++ Q+ SL L + Y GV
Sbjct: 825 FLNKTKIKILHGCENDIKWLKNDFDIDIVNLFDTMFAEMIIKNKQQSYSLKNLSQDYLGV 884
Query: 235 ATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
+K Q DWR RPLP M+ YA+ D+ LL
Sbjct: 885 ELDKSYQISDWRIRPLPTPMMNYARVDSFILL 916
>gi|88800842|ref|ZP_01116397.1| ribonuclease D [Reinekea blandensis MED297]
gi|88776415|gb|EAR07635.1| ribonuclease D [Reinekea sp. MED297]
Length = 380
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 31/284 (10%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
+D F W++ + L ++A+ + A+DTE SF LIQ+ E + +L+D +
Sbjct: 2 TDQFQWIDNNAALAQVADEWAAASVIALDTEFVRTDSFYAHLGLIQVGIEDQVWLIDPLQ 61
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSL 224
++D +++ +DP + KV H D L + + N+FDT A L P Q S
Sbjct: 62 INDWAPLVR-VLSDPAIVKVLHALSEDAEVLAHHLGVELQNVFDTQIAAGFLGHPVQMSY 120
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
A L+E C V K R DW QRPL E YA D +L + + A+LK+Q
Sbjct: 121 ARLVEAICDVELPKEATRSDWLQRPLADEQCFYAAADVLWLYRVYQHCAAQLKEQ----- 175
Query: 285 YCPDDKFNFVLEASRR--SNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
+++ +V E S+R SN P ++ +++ L G + +
Sbjct: 176 ----NRYAWVAEDSQRMVSNN----------RPVPPQS-----YYQKLRGAWKLKGERLL 216
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT 386
L LC WR+ +AR + + +L D+ +I LA K P +R+
Sbjct: 217 VLQL---LCEWRENLARATNSNRGRILQDKDLITLAEKMPTSRS 257
>gi|357601922|gb|EHJ63190.1| 3-5 exonuclease [Danaus plexippus]
Length = 382
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 477 YKQNGVKVSRQVAKKASRDLFVQKFSCK---SPVYHNCRIYANDGRLLCYCDRKKLEWYL 533
YK +K S + KK+ +K+S P+YHNC + A DG +LC CD KK +WYL
Sbjct: 248 YKVKNIKGSHKENKKSKEKTITKKYSHSPRSRPLYHNCFMEAPDGEVLCTCDTKKAKWYL 307
Query: 534 TRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCY 593
LA L++D+P I L FEP GR E +Y K+N CV CG + Y+R ++P Y
Sbjct: 308 DNKLATLIKDDPLTIRLAFEPAGRSVGEVGRYYTLVKENKCVVCGAMDSYIRKNVVPREY 367
Query: 594 RIHFPEQLKSH 604
R +FP L S+
Sbjct: 368 RKYFPGNLVSN 378
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 33/198 (16%)
Query: 87 LENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGF 146
+ + + E N+D+++ V TK+Q +E+ N + + + +L +GF
Sbjct: 28 IRSRKAEDILKNLDINI--------VTTKAQCDEVVNEMRR---------RSTLHQAIGF 70
Query: 147 -------------TALIQISTEKEDYLVDTIALHDEISI-LQPFFADPGVCKVFHGSDND 192
AL+Q+ST + + L E+ + L+ D + KV +D
Sbjct: 71 DCEWVTENGNRQPIALLQLSTFDGFCGLLRLNLLKEVPMSLKELLEDKNIYKVGVAPIDD 130
Query: 193 VMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNK--FLQREDWRQRPL 250
+L +D+ IYV + D E+ LA L TY G+ +K ++ DW L
Sbjct: 131 AKYLIQDYSIYVKSTLDLRHIVELTGHTAGGLAALANTYLGIVLDKNWRIRCSDWAAEEL 190
Query: 251 PAEMLQYAQTDAHYLLYI 268
+ YA TDA+ + I
Sbjct: 191 TERQIHYAATDAYVAIKI 208
>gi|189426679|ref|YP_001953856.1| 3'-5' exonuclease [Geobacter lovleyi SZ]
gi|189422938|gb|ACD97336.1| 3'-5' exonuclease [Geobacter lovleyi SZ]
Length = 381
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+E QL +L L+ E A+D E S+ + L+Q+S +LVD + L D +S
Sbjct: 9 IEHNHQLEQLCAELTDETELALDLEADSMHHYREKVCLLQLSNRAGTWLVDPLRLSD-LS 67
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L+ A PG+ V HG D D+ L RDF I V +FDT A + + LA LL +
Sbjct: 68 PLRVLLARPGLRTVLHGGDYDIRSLHRDFGIVVQQMFDTMVAAQFTGATEFGLAALLREH 127
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
G+ +K Q+ DW +RPL EM YA D +LL +A L A L+Q G
Sbjct: 128 FGIELDKRFQKADWSKRPLTTEMADYAAHDTAHLLELADRLHARLEQLG 176
>gi|428166833|gb|EKX35802.1| hypothetical protein GUITHDRAFT_146260 [Guillardia theta CCMP2712]
Length = 495
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 87/170 (51%), Gaps = 29/170 (17%)
Query: 541 VEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQ 600
+E AI L FEPKGR EGNE+Y+ SK+NICV CG G R+ ++P CYR HFPE
Sbjct: 273 MEGRQFAIRLRFEPKGRGH-EGNEYYLSSKENICVRCGSGQGLHRHSVVPHCYRRHFPEV 331
Query: 601 LKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASI 660
LKS SHDIVLLC C ++A A + +++++ E PL + + E R + +
Sbjct: 332 LKSRSSHDIVLLCTACMQLADMKANELRRELALECSAPLH----SSRSEVEMRDKEAVRV 387
Query: 661 TNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYYGGREISQE 710
+P R+EELR+IV + RE QE
Sbjct: 388 RG----------------------EIPEERKEELRKIVRTFV--REHLQE 413
>gi|387824213|ref|YP_005823684.1| Ribonuclease D [Francisella cf. novicida 3523]
gi|328675812|gb|AEB28487.1| Ribonuclease D [Francisella cf. novicida 3523]
Length = 364
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 28/272 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T QLN++ +S AVDTE + +R++ L+QI+TE E +L+DT+ D S
Sbjct: 3 INTNKQLNDVIEIISNTSQIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLKDLD-FS 61
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L+ F + + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 62 KLKDIFENKDIQKIIHSATNDIPIIKRFFNCEVNNIFDTQLAAAFLGFQTQSSLKTLLKE 121
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ K Q DWR RPL + L YA D YL+ + + L +L + + + +
Sbjct: 122 ILDIEMEKESQFSDWRNRPLTQKQLNYAIKDVEYLIQLKEYLQQQLIKSEYQGFFEQE-- 179
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
++E + ++TK G + TQ +
Sbjct: 180 ---LIEIQKTQFNSIENIHTK---------------------IGNIQKFDEKTQKNAILI 215
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
WR+++A+ + +RF+ +++ + ALA+K P
Sbjct: 216 AQWREMIAQEKNIPVRFIFNNKVLYALAHKNP 247
>gi|167628093|ref|YP_001678593.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167598094|gb|ABZ88092.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 366
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T QLN + L AVDTE + +R++ L+QI+TE E +L+DT+ D S
Sbjct: 3 INTNKQLNNVIEILKSTSQIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLEDLD-FS 61
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL-SKPQKSLAYLLET 230
L+ F D + K+ H + ND+ ++R F V N+FDT A L ++ Q SL LL+
Sbjct: 62 KLKDIFEDTNIQKIIHSATNDIPIIKRFFDCEVNNIFDTQLAASFLGTQSQISLKALLKD 121
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ K Q DWR+RPL + YA D +L+ I L ++L Q + + +
Sbjct: 122 ILDIEMEKESQFSDWRKRPLSQKQFDYALKDVKHLIEIKYHLESKLNQTDYKQYFYEE-- 179
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L++ E + + N G + S TQ +
Sbjct: 180 --------------LLEIQKTEFNTVEN----------IHNKIGNIQKFSEKTQKNAILV 215
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
WR+ MA+ + +RF+ ++ + A+A+K P
Sbjct: 216 AQWRESMAQQKNIPVRFIFDNKILYAIAHKNP 247
>gi|219118483|ref|XP_002180013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408270|gb|EEC48204.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 379
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 29/244 (11%)
Query: 484 VSRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVED 543
+ R++ K++ R + K + K P+Y N R+ DG LL KK WY+ ++LA + D
Sbjct: 78 MERELYKESRRKRMIPKLAMKKPMYDNIRMCDPDGILLSSISLKKARWYVKKNLASWISD 137
Query: 544 NPPAIMLLFEPK------GRPEDEGNEFYIQS-KKNICVSCGEGNHYLRYRIIPSCYRIH 596
+ I L F+PK + + E + Y Q+ K N CV CG Y+R+ ++P YR
Sbjct: 138 D--CIQLNFQPKKGLTRHDQNQQEHRKIYNQNFKINQCVVCGADERYMRHYVVPYVYRSQ 195
Query: 597 FPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGF 656
FP K+H HD+VLLC +CH A+++ + + L + K ++P F
Sbjct: 196 FPSAYKTHLPHDVVLLCPECHVTVEKASQRRMRNLEQALRQQLSVDP-----KLTSQPFF 250
Query: 657 SASITNFEAGVSPL--QLRTAAMALLHHGPTMPSNRREELRRIVMRYY---GGREISQED 711
V P +++++A ALL T+P +R E ++ ++ ++ +
Sbjct: 251 ----------VDPRLHKVQSSAFALLRWKHTLPESRVAEYESLLREWWDLSADESLTVDH 300
Query: 712 LERA 715
LERA
Sbjct: 301 LERA 304
>gi|153005072|ref|YP_001379397.1| 3'-5' exonuclease [Anaeromyxobacter sp. Fw109-5]
gi|152028645|gb|ABS26413.1| 3'-5' exonuclease [Anaeromyxobacter sp. Fw109-5]
Length = 296
Score = 103 bits (257), Expect = 5e-19, Method: Composition-based stats.
Identities = 86/275 (31%), Positives = 120/275 (43%), Gaps = 34/275 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V S L+ L + E A+DTE +S + L+Q+ST DY+VD +A+ + S
Sbjct: 13 VADSSSLSRLVEEVRAEPVVALDTESNSFHVYRERICLLQVSTRAADYIVDPLAV--DPS 70
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETY 231
L D G V HG+D DV L+R++ ++ LFDT A L + L+ L+E +
Sbjct: 71 PLGEVLCD-GRETVLHGADYDVRCLRREYGWHLPRLFDTMAAARRLGRQGLGLSALVEAH 129
Query: 232 CGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKF 291
GV +K QR DW QRPL A L YA D HYLL + L EL G
Sbjct: 130 FGVRLSKTFQRSDWGQRPLTAAQLAYAALDTHYLLALRDMLAGELDTLGAS--------- 180
Query: 292 NFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF----FRLLNGQGGVSSISSVTQDLV 347
E +RR E E A +F FR L G + ++
Sbjct: 181 ----EQARR-----------EFERIAAVVARERVFDPEGFRRLR---GARELDPAGLAVL 222
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
R + R+ A D VL + A+IA+A + P
Sbjct: 223 RAIYVAREERASGLDRPPFKVLGEDAMIAIARRLP 257
>gi|254877166|ref|ZP_05249876.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254843187|gb|EET21601.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 364
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 28/272 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T QLN + L AVDTE + +R++ L+QI+TE E +L+DT+ D S
Sbjct: 3 INTNKQLNNVIEILKSTSQIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLEDLD-FS 61
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL-SKPQKSLAYLLET 230
L+ F D + K+ H + ND+ ++R F V N+FDT A L ++ Q SL LL+
Sbjct: 62 KLKDIFEDTNIQKIIHSATNDIPIIKRFFDCEVNNIFDTQLAASFLGTQSQISLKALLKD 121
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ K Q DWR+RPL + YA D +L+ I L ++L Q + + +
Sbjct: 122 ILDIEMEKESQFSDWRKRPLSQKQFDYALKDVEHLIEIKYHLESKLNQTDYKQYFYEE-- 179
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L + E + + N G + S TQ +
Sbjct: 180 --------------LLDIQKTEFNTVEN----------IHNKIGNIQKFSEKTQKNAILV 215
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
WR+ MA+ + +RF+ ++ + A+A+K P
Sbjct: 216 AQWRESMAQQKNIPVRFIFDNKILYAIAHKNP 247
>gi|308270300|emb|CBX26912.1| hypothetical protein N47_A09410 [uncultured Desulfobacterium sp.]
Length = 382
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 101 LDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYL 160
++L + +ET S L + + +E D E S+ F L+Q++T+ ++
Sbjct: 1 MNLSLTKPVTIIETLSGLKDALVNIKEEKKIGFDLEADSMHHFPEKVCLLQVATKNCIFV 60
Query: 161 VDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
+DTI L E+S+L+P FAD + K+FHG+D DV L RDF+I + NLFD+ A L
Sbjct: 61 IDTIKLK-ELSLLKPIFADNEITKIFHGADYDVRSLFRDFNIEINNLFDSELASRFLGVK 119
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ L ++ V K + DW +RPL +ML YA D YL+ + + L EL G
Sbjct: 120 ETGLEAVIRHRFNVYLEKKFTKRDWSKRPLIDDMLHYAADDVRYLVPLYEILEKELNDIG 179
>gi|328955332|ref|YP_004372665.1| ribonuclease D [Coriobacterium glomerans PW2]
gi|328455656|gb|AEB06850.1| ribonuclease D [Coriobacterium glomerans PW2]
Length = 377
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 26/274 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T QL L +A A+DTE R++ L+Q++T + LVD + + D
Sbjct: 1 MYISTHEQLAALCDAARSFSIVAIDTEFLRERTYHPRLCLVQVATPEVSALVDPLEIED- 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L AD G K+FH D+ L + +FDT A L + Q S L+
Sbjct: 60 LSPLAALMADEGTRKIFHACSQDMEVLLNALDVLPNPIFDTQVAAAFLGERVQMSYDGLV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ +CGV+ K DW RPL AE + YA+ D YL+ + + L+Q+G S+ D
Sbjct: 120 KAFCGVSLPKTASLTDWSHRPLTAEQMDYAEDDVRYLICAYEVMAERLEQRGR-MSWALD 178
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ E+ R + K I S Q GV+ R
Sbjct: 179 EMRPLADESHYRHDRRLAYKRVKRIGSCT-------------RRQLGVA----------R 215
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L AWR+ A HD ++++SD+ ++ALA +AP
Sbjct: 216 ELAAWREGRAESHDIPRKWIMSDEVLLALAKRAP 249
>gi|323453102|gb|EGB08974.1| hypothetical protein AURANDRAFT_63530 [Aureococcus anophagefferens]
Length = 549
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
F VD E H+ S+ L+QIST DY+VD +AL E+ L P FADP + KVFH
Sbjct: 229 FGVDLEAHAEHSYESIACLVQISTADVDYVVDALALRFELRALAPAFADPNIRKVFHACQ 288
Query: 191 N-DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE------ 243
D+ LQRDF I+VVN+FDT +A ++ + L+ Y +R+
Sbjct: 289 GVDIPRLQRDFGIFVVNVFDTQEAARCAARVLGAPLGLVALYASAGVISTARRDELESLK 348
Query: 244 ------DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
DWR RPL L+YA DA +L+ + L EL+
Sbjct: 349 RAYQNCDWRSRPLSPAQLEYAVCDARHLVDLEAYLNRELRH 389
>gi|398348927|ref|ZP_10533630.1| ribonuclease III [Leptospira broomii str. 5399]
Length = 389
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
++DTE ++ LIQIS++ ++Y+ D I L D +S L P F +P + K+FH +
Sbjct: 29 ISIDTESSGYYTYYSKVCLIQISSKGKNYIFDPIRLAD-VSGLGPLFENPAILKIFHSAS 87
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ L+RDF VN+ DT + +L Q SL YL+E Y V +K Q+ +W +RPL
Sbjct: 88 DDIKALKRDFSFKFVNIADTMFSSRLLDLEQNSLLYLVEHYHKVKLSKKEQKSNWEKRPL 147
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
LQYA D YL I + + EL ++
Sbjct: 148 DKSQLQYAALDTVYLESIWEKMREELAKR 176
>gi|398343905|ref|ZP_10528608.1| ribonuclease III [Leptospira inadai serovar Lyme str. 10]
Length = 389
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
++DTE ++ LIQIS++ ++Y+ D I L D +S L P F +P + K+FH +
Sbjct: 29 ISIDTESSGYYTYYSKVCLIQISSKGKNYIFDPIRLAD-VSGLGPLFENPAILKIFHSAS 87
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ L+RDF VN+ DT + +L Q SL YL+E Y V +K Q+ +W +RPL
Sbjct: 88 DDIKALKRDFSFKFVNIADTMFSSRLLDLEQNSLLYLVEHYHKVKLSKKEQKSNWEKRPL 147
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
LQYA D YL I + + EL ++
Sbjct: 148 DKSQLQYAALDTVYLESIWEKMREELAKR 176
>gi|418749157|ref|ZP_13305449.1| 3'-5' exonuclease [Leptospira licerasiae str. MMD4847]
gi|418757399|ref|ZP_13313587.1| 3'-5' exonuclease domain / HRDC domain multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384117070|gb|EIE03327.1| 3'-5' exonuclease domain / HRDC domain multi-domain protein
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404276226|gb|EJZ43540.1| 3'-5' exonuclease [Leptospira licerasiae str. MMD4847]
Length = 389
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q ++ V+ L LS+ ++DTE ++ LIQIS++ ++Y+ D
Sbjct: 1 MQIQSDYIVVDNVRSLQLALITLSQSDCLSIDTESSGYYTYYSKVCLIQISSKGKNYIFD 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
I L D+++ L P F +P + K+FH + +D+ L+RDF +N+ DT + +L Q
Sbjct: 61 PIRL-DDLNGLGPLFENPNILKIFHSASDDIKALKRDFGFKFINIADTMFSSRLLDLEQN 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
SL YL+E Y V +K Q+ +W +RPL LQYA D YL I + EL ++
Sbjct: 120 SLLYLVEHYHKVKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLESIWTKMGEELGKR 176
>gi|226228424|ref|YP_002762530.1| putative ribonuclease [Gemmatimonas aurantiaca T-27]
gi|226091615|dbj|BAH40060.1| putative ribonuclease [Gemmatimonas aurantiaca T-27]
Length = 388
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 130/281 (46%), Gaps = 25/281 (8%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+++T ++ L+ A+DTE S F+ L+Q+ST + ++D + +
Sbjct: 8 YLDTVETVDTFLAGLNGVRAIALDTEGASFHRFVDRIYLLQLSTADHEAVIDPLPIGTPT 67
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
L DP V V H +D D+ L++D+ V +LFDT A ++L LA LLE
Sbjct: 68 R-LGVLLEDPQVEVVLHDADYDLRLLRQDYGWRVTHLFDTRVAAQLLGIRAFGLAALLEQ 126
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ G+ +K QR DW RPL A+ML YA D +LL + L EL Q+G +
Sbjct: 127 FFGIKLDKKHQRADWSMRPLTADMLDYAAHDTRHLLGLRDRLHDELVQKG---------R 177
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
+++ E R+ E + EA +S F RL G ++ +R L
Sbjct: 178 WSWAQEEFTRA----------EGTRWEPEAPDTS-FLRL----KGARDLNRRELARLREL 222
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTT 391
WRD +A D + V ++ ++ LA +APA R ++
Sbjct: 223 VRWRDGIAAELDRATFRVAGNEVLLDLARQAPATRDALFAV 263
>gi|359689033|ref|ZP_09259034.1| ribonuclease D [Leptospira licerasiae serovar Varillal str.
MMD0835]
Length = 372
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Query: 124 ALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVC 183
LS+ ++DTE ++ LIQIS++ ++Y+ D I L D+++ L P F +P +
Sbjct: 5 TLSQSDCLSIDTESSGYYTYYSKVCLIQISSKGKNYIFDPIRL-DDLNGLGPLFENPNIL 63
Query: 184 KVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQRE 243
K+FH + +D+ L+RDF +N+ DT + +L Q SL YL+E Y V +K Q+
Sbjct: 64 KIFHSASDDIKALKRDFGFKFINIADTMFSSRLLDLEQNSLLYLVEHYHKVKLSKKEQKS 123
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
+W +RPL LQYA D YL I + EL ++
Sbjct: 124 NWEKRPLEKSQLQYAALDTVYLESIWTKMGEELGKR 159
>gi|397632843|gb|EJK70719.1| hypothetical protein THAOC_07901 [Thalassiosira oceanica]
Length = 352
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 125/301 (41%), Gaps = 59/301 (19%)
Query: 450 SCPLSVFNYVLPAKNNWELKNQSNKFVYKQNGVKVSRQVAKKASRDLFVQKFSCKSPVYH 509
SCPL V LP+ V R++ K R S K+P+Y
Sbjct: 58 SCPLGVNEEYLPSH--------------------VRREMHKHRKRMSKAAMLSMKTPMYD 97
Query: 510 NCRIYANDGRLLCYCDRKKLEWYLTRDLAKLV-------------EDNPPAIMLLFEPKG 556
N + + +G+ +C KK +WYL + +A+ E I LLFE G
Sbjct: 98 NVFMLSTEGQPMCTISMKKAKWYLKKGIAEWSSLPEHKQWTPEEKEGGAKCIRLLFEHNG 157
Query: 557 RPEDEGNE---FYIQS-KKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLL 612
E + Y++S KKNICVSCG+ H++R+ IIP YR P + KSH SHDI +L
Sbjct: 158 SKERDTTSPESVYLRSVKKNICVSCGDDGHHMRHYIIPYAYRSLLPNEYKSHMSHDICIL 217
Query: 613 CVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQL 672
C +CH +++ KQ+ R R G + +
Sbjct: 218 CPECHVDCERHSKRRMKQM---------------ERDLRTRLGREYNEPAMIEDPILYHV 262
Query: 673 RTAAMALLHHGPTMPSNRREELRRIVMRYYGG-------REISQEDLERALLVGMSPRER 725
R+ A+AL+ MP R +E +V Y E+++ +LE+A V + R
Sbjct: 263 RSCALALVKSRERMPLERIKEYEVVVREYLASTCEIDSEEELTKAELEKACAVNHKVKNR 322
Query: 726 R 726
+
Sbjct: 323 K 323
>gi|337755515|ref|YP_004648026.1| ribonuclease D [Francisella sp. TX077308]
gi|336447120|gb|AEI36426.1| Ribonuclease D [Francisella sp. TX077308]
Length = 364
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 28/272 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T +L ++ AL AVDTE + +R++ L+QI+TE E +L+DT+ D S
Sbjct: 3 IDTNKKLEDVVKALKNAKEIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLEDLD-FS 61
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL-SKPQKSLAYLLET 230
L+ F D + K+ H + ND+ ++R F V N+FDT A L ++ Q SL LL+
Sbjct: 62 KLKDIFEDTNIQKIIHSATNDIPIIKRFFDCEVNNIFDTQLAASFLGTQSQISLKALLKD 121
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ K Q DWR+RPL + YA D +L+ I L ++L Q + + +
Sbjct: 122 ILDIEMEKESQFSDWRKRPLSQKQFDYALKDVEHLIEIKYHLESKLNQTDYKQYFHEE-- 179
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L++ E + + N G + + TQ +
Sbjct: 180 --------------LLEIQKTEFNTIDN----------IHNKIGNIQKFNEKTQKNAILV 215
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
WR+ +A+ + +RF+ ++ + A+A+K P
Sbjct: 216 AQWRESIAQQKNIPVRFIFDNKILYAIAHKNP 247
>gi|256372386|ref|YP_003110210.1| 3'-5' exonuclease [Acidimicrobium ferrooxidans DSM 10331]
gi|256008970|gb|ACU54537.1| 3'-5' exonuclease [Acidimicrobium ferrooxidans DSM 10331]
Length = 396
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 28/285 (9%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
D VW++ +S L+EL A+DTE H R++ AL+Q++ ++ +L+D L
Sbjct: 19 DEPVWLDRQSDLDELVGVGLGVPRIAIDTEFHRERTYYPRLALVQVAIDRRVWLIDP--L 76
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
++S + +F + V VFH +D D+ ++R +FDT A L SL
Sbjct: 77 RVDLSPIAAWFDE--VELVFHAADQDLEIIERAVGARPRRIFDTQVAGGFLGAGHASLGA 134
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
LL+ Y GV+ +K + DW +RPL L YA D YL +A L+ EL +G E+ +
Sbjct: 135 LLDRYLGVSISKAERTSDWLRRPLEPGQLAYAANDVRYLAALADRLLEELHARGRED-WA 193
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ V RR + ++ I G + + +
Sbjct: 194 RSEMARLV---ERRRRDIEPELAWTRIRECRG--------------------LDPTGRRI 230
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTT 391
+ AWR+ A+ D +R VLSD A+ ++A P++ T++ +
Sbjct: 231 AASVAAWRERTAQRDDVPVRTVLSDLAVASVAKARPSSLTELRSV 275
>gi|95928412|ref|ZP_01311160.1| 3'-5' exonuclease [Desulfuromonas acetoxidans DSM 684]
gi|95135683|gb|EAT17334.1| 3'-5' exonuclease [Desulfuromonas acetoxidans DSM 684]
Length = 374
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 114 TKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISIL 173
T + LA L FAVD E S+ S+ L+Q + L+D +A D ++ L
Sbjct: 9 TDDAVVALAKDLETCAVFAVDLEADSMHSYQEKVCLLQFTYHDTTVLLDPLAAGD-LAPL 67
Query: 174 QPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCG 233
+P AD + K+FH +D D+ L RDF I + LFDT A + L + + LA +L Y
Sbjct: 68 KPVLADSSIRKIFHAADYDIRCLARDFDIEIRGLFDTMIASQFLGEEKVGLADVLGKYFD 127
Query: 234 VATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNF 293
V +K QR DW +RPL EM YA D +L + L LK++ + + +++F
Sbjct: 128 VTLDKRFQRADWSKRPLSPEMCHYAAEDTRHLEKLVAILEPALKEK--DRLWWVEEEFRL 185
Query: 294 VLEASRR 300
+ +A R
Sbjct: 186 LEQAKFR 192
>gi|219118334|ref|XP_002179944.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408997|gb|EEC48930.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 700
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 105 RSDSFVWVETKSQLNELANALSKE--FFFAVDTEQHSLRSFLGFTALIQISTEKE-DYLV 161
R + V+T S++ + LS+ A D E ++ + T L+Q+ST+ Y++
Sbjct: 230 RKSEWTLVDTPSKMRACISELSQSPPLALAFDVESYNKSKYTQLTCLLQLSTDHGMAYVI 289
Query: 162 DTIA--LHDEISILQPFFADPGVCKVFHGSDN-DVMWLQRDFHIYVVNLFDTAKACEVLS 218
D +A + +E+ L P FADP + KV H DV L RDF I+V+N FDT +A +VL
Sbjct: 290 DPLAPGVFEEVGGLAPIFADPDIVKVGHSIGGLDVRSLHRDFGIFVINAFDTYEAAKVLC 349
Query: 219 KPQKSLAYLLETYCGVATN--KFLQRE----DWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
LA + E Y T+ K L+ E DWR RPL M+QY + D H+L+ + +
Sbjct: 350 LESHGLAAVCEHYGMKYTDLYKSLKNEYQTCDWRARPLTGPMIQYGRFDVHFLIELRMLM 409
Query: 273 VAELKQ 278
+ +L +
Sbjct: 410 IRDLTK 415
>gi|118497275|ref|YP_898325.1| ribonuclease D [Francisella novicida U112]
gi|194323578|ref|ZP_03057355.1| ribonuclease D [Francisella novicida FTE]
gi|208779068|ref|ZP_03246414.1| ribonuclease D [Francisella novicida FTG]
gi|118423181|gb|ABK89571.1| ribonuclease D [Francisella novicida U112]
gi|194322433|gb|EDX19914.1| ribonuclease D [Francisella tularensis subsp. novicida FTE]
gi|208744868|gb|EDZ91166.1| ribonuclease D [Francisella novicida FTG]
Length = 364
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LEDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDIIKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|254374109|ref|ZP_04989591.1| ribonuclease D [Francisella novicida GA99-3548]
gi|151571829|gb|EDN37483.1| ribonuclease D [Francisella novicida GA99-3548]
Length = 364
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDIIKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|134302344|ref|YP_001122313.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|421752196|ref|ZP_16189228.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|421754061|ref|ZP_16191044.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|421757785|ref|ZP_16194655.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|421759628|ref|ZP_16196457.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|424674949|ref|ZP_18111861.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
gi|134050121|gb|ABO47192.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409085560|gb|EKM85698.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|409085718|gb|EKM85850.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|409090457|gb|EKM90474.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|409091730|gb|EKM91720.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|417434204|gb|EKT89163.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
Length = 364
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
V T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 VNTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|254372648|ref|ZP_04988137.1| ribonuclease III [Francisella tularensis subsp. novicida GA99-3549]
gi|151570375|gb|EDN36029.1| ribonuclease III [Francisella novicida GA99-3549]
Length = 364
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDIIKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|57340046|gb|AAW50010.1| hypothetical protein FTT0776 [synthetic construct]
Length = 399
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 29 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 86
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 87 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 146
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 147 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 205
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 206 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 240
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 241 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 273
>gi|156502902|ref|YP_001428967.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290953633|ref|ZP_06558254.1| ribonuclease D [Francisella tularensis subsp. holarctica URFT1]
gi|423051113|ref|YP_007009547.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
gi|156253505|gb|ABU62011.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|421951835|gb|AFX71084.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
Length = 363
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|345304813|ref|XP_003428262.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Ornithorhynchus anatinus]
Length = 442
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 485 SRQVAKKASRDLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDN 544
R K + L V + KSP+Y NC ++A DG+ LC CDR+K +WYL + + +L+ +
Sbjct: 271 GRDPRKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLDKGIGELMSEE 330
Query: 545 PPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSH 604
P + L FEP GRPE +G ++Y+ K+N+CV CG+ Y+R C + P LK
Sbjct: 331 PFVVKLRFEPSGRPESQG-DYYLTVKENLCVVCGKRESYIRI-----CNESYVPHGLKVV 384
Query: 605 RSH 607
+ H
Sbjct: 385 QCH 387
>gi|89256742|ref|YP_514104.1| ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115315142|ref|YP_763865.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|254368041|ref|ZP_04984061.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|422939063|ref|YP_007012210.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
gi|89144573|emb|CAJ79888.1| Ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115130041|gb|ABI83228.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|134253851|gb|EBA52945.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|407294214|gb|AFT93120.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
Length = 364
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|56707887|ref|YP_169783.1| ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670358|ref|YP_666915.1| ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|254370381|ref|ZP_04986386.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874700|ref|ZP_05247410.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717133|ref|YP_005305469.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|379725737|ref|YP_005317923.1| ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|385794536|ref|YP_005830942.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|421755410|ref|ZP_16192356.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
gi|56604379|emb|CAG45409.1| Ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320691|emb|CAL08792.1| Ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|151568624|gb|EDN34278.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840699|gb|EET19135.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|282159071|gb|ADA78462.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|377827186|gb|AFB80434.1| Ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|377828810|gb|AFB78889.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|409088212|gb|EKM88289.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
Length = 364
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|187931952|ref|YP_001891937.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712861|gb|ACD31158.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
Length = 364
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|385792618|ref|YP_005825594.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676764|gb|AEB27634.1| Ribonuclease D [Francisella cf. novicida Fx1]
Length = 364
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L YA D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYAIKDVEYLIQLKEYLQQQLVKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKTLYTIAHINP 247
>gi|421099052|ref|ZP_15559712.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200901122]
gi|410797786|gb|EKR99885.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200901122]
Length = 388
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 144/341 (42%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ ++DTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ--- 279
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL ++
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELTKRNLY 179
Query: 280 ---------------GNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
G+E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIACEEPGSEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A S+F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDIAKLTEIVGKKDAESLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA + P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNP 340
>gi|359729247|ref|ZP_09267943.1| ribonuclease D [Leptospira weilii str. 2006001855]
gi|417777730|ref|ZP_12425544.1| 3'-5' exonuclease [Leptospira weilii str. 2006001853]
gi|410782027|gb|EKR66592.1| 3'-5' exonuclease [Leptospira weilii str. 2006001853]
Length = 388
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ ++DTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ--- 279
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL ++
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELTKRNLY 179
Query: 280 ---------------GNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
G E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIACEEPGTEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A S+F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDIAKLTEIVGKKDAESLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA + P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNP 340
>gi|45659084|ref|YP_003170.1| ribonuclease D [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|294828464|ref|NP_714272.2| ribonuclease D [Leptospira interrogans serovar Lai str. 56601]
gi|386075688|ref|YP_005990008.1| ribonuclease D [Leptospira interrogans serovar Lai str. IPAV]
gi|417761741|ref|ZP_12409746.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000624]
gi|417771399|ref|ZP_12419294.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417772941|ref|ZP_12420827.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000621]
gi|417785994|ref|ZP_12433691.1| 3'-5' exonuclease [Leptospira interrogans str. C10069]
gi|418667421|ref|ZP_13228833.1| 3'-5' exonuclease [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671067|ref|ZP_13232422.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000623]
gi|418683302|ref|ZP_13244507.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692063|ref|ZP_13253144.1| 3'-5' exonuclease [Leptospira interrogans str. FPW2026]
gi|418702415|ref|ZP_13263323.1| 3'-5' exonuclease [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418704115|ref|ZP_13264995.1| 3'-5' exonuclease [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418710116|ref|ZP_13270898.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418728912|ref|ZP_13287481.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12758]
gi|421083604|ref|ZP_15544478.1| 3'-5' exonuclease [Leptospira santarosai str. HAI1594]
gi|421101603|ref|ZP_15562215.1| 3'-5' exonuclease [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421115524|ref|ZP_15575929.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421126273|ref|ZP_15586510.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135637|ref|ZP_15595758.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|45602330|gb|AAS71807.1| ribonuclease D [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|293386317|gb|AAN51290.2| ribonuclease D [Leptospira interrogans serovar Lai str. 56601]
gi|353459480|gb|AER04025.1| ribonuclease D [Leptospira interrogans serovar Lai str. IPAV]
gi|400324875|gb|EJO77159.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400358126|gb|EJP14242.1| 3'-5' exonuclease [Leptospira interrogans str. FPW2026]
gi|409942474|gb|EKN88086.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000624]
gi|409946596|gb|EKN96605.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409950823|gb|EKO05345.1| 3'-5' exonuclease [Leptospira interrogans str. C10069]
gi|410012826|gb|EKO70912.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020301|gb|EKO87105.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410368775|gb|EKP24151.1| 3'-5' exonuclease [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433965|gb|EKP78302.1| 3'-5' exonuclease [Leptospira santarosai str. HAI1594]
gi|410436223|gb|EKP85342.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410577276|gb|EKQ40272.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000621]
gi|410581930|gb|EKQ49736.1| 3'-5' exonuclease [Leptospira interrogans str. 2002000623]
gi|410757024|gb|EKR18642.1| 3'-5' exonuclease [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410758584|gb|EKR24813.1| 3'-5' exonuclease [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410766337|gb|EKR37024.1| 3'-5' exonuclease [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410769574|gb|EKR44805.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410776315|gb|EKR56294.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12758]
gi|455667095|gb|EMF32456.1| 3'-5' exonuclease [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|455792168|gb|EMF43937.1| 3'-5' exonuclease [Leptospira interrogans serovar Lora str. TE
1992]
gi|456823784|gb|EMF72221.1| 3'-5' exonuclease [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456966971|gb|EMG08438.1| 3'-5' exonuclease [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 388
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTARSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G+E + DKF +LE SR+ N
Sbjct: 180 EEAISEFEKIASEEPGSEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYT--------------KEIESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ K++ G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVVLLMKARRDMKKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I L+ K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNP 340
>gi|421121879|ref|ZP_15582169.1| 3'-5' exonuclease [Leptospira interrogans str. Brem 329]
gi|410345216|gb|EKO96335.1| 3'-5' exonuclease [Leptospira interrogans str. Brem 329]
Length = 388
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTARSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G+E + DKF +LE SR+ N
Sbjct: 180 EEAISEFEKIASEEPGSEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYT--------------KEIESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ K++ G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVVLLMKARRDMKKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKEPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I L+ K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNP 340
>gi|418715523|ref|ZP_13275644.1| 3'-5' exonuclease [Leptospira interrogans str. UI 08452]
gi|418727334|ref|ZP_13285929.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12621]
gi|409959575|gb|EKO23345.1| 3'-5' exonuclease [Leptospira interrogans str. UI 12621]
gi|410788424|gb|EKR82142.1| 3'-5' exonuclease [Leptospira interrogans str. UI 08452]
Length = 388
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTARSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LENLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G+E + DKF +LE SR+ N
Sbjct: 180 EEAISEFEKIASEEPGSEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYT--------------KEIESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ K++ G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVVLLMKARRDMKKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I L+ K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNP 340
>gi|398334995|ref|ZP_10519700.1| ribonuclease III [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 366
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 62/312 (19%)
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
++DTE ++ LIQIS + ++Y++D + L + + L F D + K+FH + +
Sbjct: 8 SIDTESSGYYTYFSKVCLIQISAKGKNYIIDPLKLQN-LDGLGTLFEDKKILKIFHSAID 66
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ L++DF VN+ DT + +L Q SL YL++ Y + +K Q+ +W +RPL
Sbjct: 67 DIKALKKDFGFKFVNIADTGFSSRLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLE 126
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQ------------------GNENSYCPDDKFNF 293
LQYA D YL I + + EL ++ G E + DKF
Sbjct: 127 KSQLQYAALDTVYLETIWEKMKEELTKRNLYEEALSEFEKIASEEPGAEGNSISMDKFPE 186
Query: 294 VLE------------------ASRRSNTVCLQVYTKE--------------IESYPGEAA 321
+LE SR+ N +V+ E + G+
Sbjct: 187 ILEYSADERRFIYDTLVFRDDKSRKLNKAPFRVFNNEKVVLLVKSRRDMAKLTEILGKKD 246
Query: 322 ASSIFFRLLNGQGGV-----------SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
A ++F N G ++++ + +RL WR+ + + S + + S
Sbjct: 247 AETLFQIYANPSGPPIQKSELFKKPGENLTNEEGERFKRLRIWRETIMSIRRMSHQMMPS 306
Query: 371 DQAIIALANKAP 382
++ I LA+K P
Sbjct: 307 NKMIAELAHKNP 318
>gi|456983567|gb|EMG19831.1| 3'-5' exonuclease [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 388
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTARSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLEAS 298
++ G+E + DKF +LE S
Sbjct: 180 EEAISEFEKIASEEPGSEGNSISMDKFPEILEYS 213
>gi|418720286|ref|ZP_13279484.1| 3'-5' exonuclease [Leptospira borgpetersenii str. UI 09149]
gi|418738363|ref|ZP_13294758.1| 3'-5' exonuclease [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410743264|gb|EKQ92007.1| 3'-5' exonuclease [Leptospira borgpetersenii str. UI 09149]
gi|410745856|gb|EKQ98764.1| 3'-5' exonuclease [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456888486|gb|EMF99469.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200701203]
Length = 388
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ ++DTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFHNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ--- 279
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL ++
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELTKRNLY 179
Query: 280 ---------------GNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
G E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIASEEPGAEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A S+F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDMAKLTEIVGKKDAESLFRIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA + P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNP 340
>gi|254369642|ref|ZP_04985652.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122601|gb|EDO66730.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
Length = 364
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 30/273 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD-EI 170
+ T QLN + L AVDTE + +R++ L+Q++TE E +L+DT L D E
Sbjct: 3 INTNKQLNNVIEILKNTSQIAVDTEFYWMRTYYPELCLVQLATENEIFLIDT--LKDLEF 60
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L+ F D + K+ H + ND+ ++R F+ V N+FDT A L + Q SL LL+
Sbjct: 61 KKLKEIFEDKDILKIIHSATNDIPIIKRFFNCEVNNIFDTQLAATFLGFQTQSSLKTLLK 120
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K Q DWR RPL L Y+ D YL+ + + L +L + ++ + +
Sbjct: 121 EILDIEIEKESQFSDWRNRPLTQNQLNYSIKDVEYLIQLKEYLQQQLAKSEYQDFFEQE- 179
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
++E + ++ K G + TQ
Sbjct: 180 ----LIEVQKTQFNSIENIHAK---------------------IGNIQKFDEKTQRNAIL 214
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ WR+ +A+ + +RF+ +++ + +A+ P
Sbjct: 215 IAQWRETIAQEKNIPVRFIFNNKILYTIAHINP 247
>gi|398332245|ref|ZP_10516950.1| ribonuclease III [Leptospira alexanderi serovar Manhao 3 str. L 60]
gi|456860990|gb|EMF79700.1| 3'-5' exonuclease [Leptospira weilii serovar Topaz str. LT2116]
Length = 388
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ ++DTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ--- 279
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL ++
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELTKRNLY 179
Query: 280 ---------------GNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
G E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIACEEPGAEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A S+F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDIAKLTEIVGKKDAESLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA + P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNP 340
>gi|421095097|ref|ZP_15555810.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200801926]
gi|410361807|gb|EKP12847.1| 3'-5' exonuclease [Leptospira borgpetersenii str. 200801926]
Length = 439
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 145/347 (41%), Gaps = 62/347 (17%)
Query: 97 SNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK 156
S V +Q + ++ V+T L + LS+ ++DTE ++ LIQIS +
Sbjct: 46 SQVAFFMQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKG 105
Query: 157 EDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEV 216
++Y++D + L + + L F D + K+FH + +D+ L++DF N+ DT + +
Sbjct: 106 KNYIIDPLKLQN-LDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFHNIADTGFSSRL 164
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L Q SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL
Sbjct: 165 LDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEEL 224
Query: 277 KQQ------------------GNENSYCPDDKFNFVLE------------------ASRR 300
++ G E + DKF +LE SR+
Sbjct: 225 TKRNLYEEALSEFEKIASEEPGAEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRK 284
Query: 301 SNTVCLQVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV---------- 336
N +V+ E + G+ A S+F N G
Sbjct: 285 LNKAPFRVFNNEKVILLVKSRRDMAKLTEIVGKKDAESLFRIYANPSGPPIQKSELFKKP 344
Query: 337 -SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
++++ + +RL WR+ + + S + + S++ I LA + P
Sbjct: 345 GENLTNEEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNP 391
>gi|116329422|ref|YP_799142.1| ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116329974|ref|YP_799692.1| ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116122166|gb|ABJ80209.1| Ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116123663|gb|ABJ74934.1| Ribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 388
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ ++DTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFHNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ--- 279
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL ++
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELTKRNLY 179
Query: 280 ---------------GNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
G E + DKF +LE SR+ N
Sbjct: 180 EEAFSEFEKIASEEPGAEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A S+F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDMAKLTEIVGKKDAESLFRIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA + P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNP 340
>gi|224014276|ref|XP_002296801.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968656|gb|EED87002.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 318
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 55/231 (23%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLA--------KLVEDNPPA-------- 547
KSP+Y N DG+L+C KK WY+ + +A K+ D A
Sbjct: 2 KSPMYDNVFSLDPDGKLMCTISMKKARWYIRKGIAEWCDKDGVKIALDETDAGGTASCND 61
Query: 548 ------IMLLFEPKG---RPEDEGNEFYIQS-KKNICVSCGEGNHYLRYRIIPSCYRIHF 597
I LLF+PKG + E Y+++ K+N+CVSCG+ +++R+ I+P YR
Sbjct: 62 GVDARYIRLLFKPKGGTYQTEGSLENLYLRTPKQNVCVSCGDDGYHMRHFIVPYSYRNLL 121
Query: 598 PEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFS 657
++ KSH SHDIV+LC CH ++K +Q+ E RPG S
Sbjct: 122 TDEYKSHMSHDIVILCPTCHVNCEKMSKKRMRQMEDEL--------------RSKRPGDS 167
Query: 658 ASITNFEAGVSPL-------QLRTAAMALLHHGPTMPSNRREELRRIVMRY 701
SP+ +R+ A+AL+ MP + E R+V Y
Sbjct: 168 C--------CSPVIDDQHLHHVRSCAIALVKWKKNMPHEKVESHERVVREY 210
>gi|418679035|ref|ZP_13240300.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|418685440|ref|ZP_13246616.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418740873|ref|ZP_13297249.1| 3'-5' exonuclease [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421089663|ref|ZP_15550467.1| 3'-5' exonuclease [Leptospira kirschneri str. 200802841]
gi|421131604|ref|ZP_15591784.1| 3'-5' exonuclease [Leptospira kirschneri str. 2008720114]
gi|400320450|gb|EJO68319.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|410001487|gb|EKO52083.1| 3'-5' exonuclease [Leptospira kirschneri str. 200802841]
gi|410356978|gb|EKP04263.1| 3'-5' exonuclease [Leptospira kirschneri str. 2008720114]
gi|410740048|gb|EKQ84770.1| 3'-5' exonuclease [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410751468|gb|EKR08445.1| 3'-5' exonuclease [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 388
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTTRSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWAKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G E + DKF +LE SR+ N
Sbjct: 180 EEAISEFEKIASEEPGPEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVVLLVKARRDMNKLTEIVGKKDAETLFQIYTNPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I L+ K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNP 340
>gi|398340441|ref|ZP_10525144.1| ribonuclease III [Leptospira kirschneri serovar Bim str. 1051]
gi|418693755|ref|ZP_13254804.1| 3'-5' exonuclease [Leptospira kirschneri str. H1]
gi|421106132|ref|ZP_15566708.1| 3'-5' exonuclease [Leptospira kirschneri str. H2]
gi|409958332|gb|EKO17224.1| 3'-5' exonuclease [Leptospira kirschneri str. H1]
gi|410008854|gb|EKO62514.1| 3'-5' exonuclease [Leptospira kirschneri str. H2]
Length = 388
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTTRSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWAKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G E + DKF +LE SR+ N
Sbjct: 180 EEAISEFEKIASEEPGPEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ E + G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVVLLVKARRDMNKLTEIVGKKDAETLFQIYTNPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I L+ K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNP 340
>gi|417767687|ref|ZP_12415623.1| 3'-5' exonuclease [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349705|gb|EJP01993.1| 3'-5' exonuclease [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 388
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + LS+ +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTARSLQLVLINLSQADSISVDTESSGYYTYFSKVCLIQISAKGKNYIID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F D + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLQN-LESLGNLFEDKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL QYA D YL I + + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQFQYAALDTVYLETIWEKMKEELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G+E + DKF +LE SR+ N
Sbjct: 180 EEAISEFEKIASEEPGSEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYT--------------KEIESYPGEAAASSIFFRLLNGQGGV-----------SSISS 341
+V+ K++ G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVVLLMKARRDMKKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I L+ K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELSQKNP 340
>gi|374585390|ref|ZP_09658482.1| 3'-5' exonuclease [Leptonema illini DSM 21528]
gi|373874251|gb|EHQ06245.1| 3'-5' exonuclease [Leptonema illini DSM 21528]
Length = 377
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+++++ + L+ + L K + AVDTE ++ LIQIST+ + +++DT+A
Sbjct: 4 YIYIDRQQPLDLAYSVLDKAPYLAVDTESSGYYTYYSELCLIQISTDSQHFIIDTLA-KL 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLL 228
E+ L FA + K+FH + +D+ +R + N+FDT A L SL L+
Sbjct: 63 ELQRLAHIFAGQNIPKIFHAAASDMGEFRRQYGWSFANVFDTHMAARYLRHEACSLLALV 122
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ Y GV K Q+ +W +RPL L YA D YL I + + EL++ G
Sbjct: 123 QRYVGVELEKKEQKSNWMKRPLTKSQLDYAHLDTVYLYQIMQQMKEELERAG 174
>gi|221194797|ref|ZP_03567854.1| ribonuclease D [Atopobium rimae ATCC 49626]
gi|221185701|gb|EEE18091.1| ribonuclease D [Atopobium rimae ATCC 49626]
Length = 376
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 26/276 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T+ +L + AVDTE +++ L+Q+ST +E +D +++ D+
Sbjct: 1 MYISTQEELISFCLRAAHVPVLAVDTEFLREKTYYPKLCLVQVSTGEEIAAIDPLSI-DD 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L F D + KV H D+ L H +FDT A L + Q S A ++
Sbjct: 60 LSPLVRLFEDQKIVKVIHACSQDLEVLLYGMHCACAPVFDTQLAAAFLGMRQQASYASVV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
E Y GV K DW +RPL E L YA+ D YL I +C+ L + P+
Sbjct: 120 EHYMGVHLPKTESLTDWSRRPLDPEQLVYAEDDVRYLPDIYRCMYERLMKTNRLGWLMPE 179
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ YT E++ + + + + N S++ L R
Sbjct: 180 -----------------MNAYTAP-ENFKRDPKEAYLHLKRSN------SLTRRQMALAR 215
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+CAWR+ A H+ ++++SD+ ++ + ++PA
Sbjct: 216 EICAWREERAAQHNIPRKWIISDETLVEICKRSPAT 251
>gi|410941522|ref|ZP_11373317.1| 3'-5' exonuclease [Leptospira noguchii str. 2006001870]
gi|410783321|gb|EKR72317.1| 3'-5' exonuclease [Leptospira noguchii str. 2006001870]
Length = 372
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 62/312 (19%)
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
+VDTE ++ LIQIS + ++Y++D + L + + L F D + KVFH + +
Sbjct: 8 SVDTESSGYYTYFSKVCLIQISAKGKNYIIDPLKLQN-LEGLGNLFEDKKILKVFHSAID 66
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ L++DF N+ DT + +L Q SL YL++ Y + +K Q+ +W +RPL
Sbjct: 67 DIKALKKDFGFQFQNIADTGFSSRLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPLE 126
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAEL------------------KQQGNENSYCPDDKFNF 293
LQYA D YL I + + EL ++ G E + DKF
Sbjct: 127 KSQLQYAALDTVYLETIWEKMREELIKRNLYEEAISEFEKIASEEPGPEGNSISMDKFPE 186
Query: 294 VLE------------------ASRRSNTVCLQVYTKE--------------IESYPGEAA 321
+LE SR+ N +V+ E + G+
Sbjct: 187 ILEYSADERRFIYDTLVFRDDKSRKLNKAPFRVFNNEKVVLLVKSRRDMNKLTEIVGKKD 246
Query: 322 ASSIFFRLLNGQGGV-----------SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
A ++F N G ++++ + +RL WR+ + + S + + S
Sbjct: 247 AETLFQIYTNPSGPPIQKSELFKKPGENLTNEEGERFKRLRIWRETIMSIRRMSHQMLPS 306
Query: 371 DQAIIALANKAP 382
++ I L+ K P
Sbjct: 307 NKMIAELSQKNP 318
>gi|389581646|ref|ZP_10171673.1| ribonuclease D [Desulfobacter postgatei 2ac9]
gi|389403281|gb|EIM65503.1| ribonuclease D [Desulfobacter postgatei 2ac9]
Length = 404
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ ++ T L ++ L VD E S+ F LIQI+ + +L+D ++D
Sbjct: 31 YQFITTDKDLAQVCLKLEPCEIIGVDLEADSMHCFSEKICLIQIAGPNQAWLLDPFLIND 90
Query: 169 EISILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
+ PF +P + KVFHGSD DV L R+ + + NLFDT AC L+ ++ L
Sbjct: 91 FL----PFSRILENPEIIKVFHGSDFDVRSLDRELSVEIENLFDTEIACRFLNIKERGLG 146
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
LL+++ + +K Q+ DW +RPL EM+ Y+ D L+ + L L++ G
Sbjct: 147 ALLKSFFDIDVDKKYQKVDWSKRPLKEEMIAYSVGDVATLVDLHDLLKERLEKIG 201
>gi|183219597|ref|YP_001837593.1| putative ribonuclease D [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909736|ref|YP_001961291.1| ribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774412|gb|ABZ92713.1| Ribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778019|gb|ABZ96317.1| Putative ribonuclease D (RNase D) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 406
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + +++ V+T L+ L + ++DTE ++ LIQI++ ++YL+D
Sbjct: 1 MQINSNYILVDTAKALDLALINLRQSKIMSIDTESSGYYTYYPKVCLIQINSNGKNYLID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ + + +S L P F DP + K+FH + +D+ L+RDF VN DT + +LS Q
Sbjct: 61 PLKITN-LSALGPLFEDPNILKIFHSAQDDIKALKRDFGFKFVNTADTMISSRLLSLEQS 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
SL++++E Y V +K Q+ +W RPL + L+YA D YL I + +LK++
Sbjct: 120 SLSFVVEHYHKVTLSKVEQKSNWEIRPLQKQQLKYAALDTAYLESIWLKMEEDLKRRS 177
>gi|408791723|ref|ZP_11203333.1| 3'-5' exonuclease [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463133|gb|EKJ86858.1| 3'-5' exonuclease [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 406
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + +++ V+T L+ L + ++DTE ++ LIQI++ ++YL+D
Sbjct: 1 MQINSNYILVDTAKALDLALINLRQSKIMSIDTESSGYYTYYPKVCLIQINSNGKNYLID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ + + +S L P F D + K+FH + +D+ L+RDF VN DT + +LS Q
Sbjct: 61 PLKITN-LSALGPLFKDENILKIFHSAQDDIKALKRDFGFEFVNTADTMISSRLLSLEQS 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
SL++++E Y V +K Q+ +W RPL + L+YA D YL I + ELK++G
Sbjct: 120 SLSHVVEHYHKVTLSKVEQKSNWEIRPLQKQQLKYAALDTAYLESIWLKMEEELKRRG 177
>gi|359684501|ref|ZP_09254502.1| ribonuclease D [Leptospira santarosai str. 2000030832]
gi|410449393|ref|ZP_11303448.1| 3'-5' exonuclease [Leptospira sp. Fiocruz LV3954]
gi|410016618|gb|EKO78695.1| 3'-5' exonuclease [Leptospira sp. Fiocruz LV3954]
Length = 388
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 142/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + L + +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLINLGQADSLSVDTESSGYYTYFSKVCLIQISAKGKNYILD 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F + + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLRN-LDGLGTLFENKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKDELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIASEEPGGEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQG-----------GVSSISS 341
+V+ E + G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDMTKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQKNP 340
>gi|163752438|ref|ZP_02159629.1| ribonuclease D [Shewanella benthica KT99]
gi|161327662|gb|EDP98855.1| ribonuclease D [Shewanella benthica KT99]
Length = 380
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 121/293 (41%), Gaps = 40/293 (13%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F ++E + L L + + +DTE R+F LIQ K L+D +A++
Sbjct: 11 AFEYIEDDASLTALVSQYRQSDLLVLDTEFVRTRTFYARLGLIQAYDGKTLALIDPVAVN 70
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ +S A+PG+ V H D+ R+ H NLFD+ A L L Y
Sbjct: 71 N-LSEFWGLLAEPGITTVLHSCSEDLEVFARNGHCQPANLFDSQIAA-ALCGLGHGLGYA 128
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E ++ +K R DW +RPL L YA D +YL + L+ +L+QQG
Sbjct: 129 KLVEQTLDISLDKGESRTDWMKRPLSEAQLNYAANDVYYLYNLYPQLLEKLQQQG----- 183
Query: 286 CPDDKFNFVLEASRRSNTVCL------QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
+ +V+E R L Q Y K ++ +
Sbjct: 184 ----RLAWVIEEGERMTRGRLTPPDLDQAYLKVKNAF---------------------QL 218
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
S ++ L WR A D ++ FV+ D A+I LA K P N D++ I
Sbjct: 219 SPRQLAYLKVLARWRLKKAITRDLAVGFVVKDHALIGLAKKQPKNSQDLFKMI 271
>gi|378754805|gb|EHY64834.1| hypothetical protein NERG_02237 [Nematocida sp. 1 ERTm2]
Length = 471
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 37/296 (12%)
Query: 96 FSNVDLDLQRSDSFVWVETKSQLNELANA-LSKEFFFAVDTEQHSLRSFLGFTALIQIST 154
NVD + +++T+ + E+AN+ + +E VD + H RS+ GFT IQ++T
Sbjct: 174 LKNVDSAADITPIIYYIKTEEEC-EMANSHIMQEKIIGVDIKTHKFRSYSGFTCYIQVAT 232
Query: 155 EKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKAC 214
+ Y+ D I L + +L F+++P + KVF+ + + WL++D VV+ D
Sbjct: 233 LESVYIFDMIELRNHSKLL-TFWSEPSIVKVFYKASEKIAWLRKDLQYTVVSYIDLLSLH 291
Query: 215 EVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVA 274
+P ++L + G K LQ DWR +P+ EM YLL A +++
Sbjct: 292 GYPEEPIRNLGRAVFYSTGRQVRKKLQLMDWRYKPVSDEMYTDLTEQVGYLLLAAAGMIS 351
Query: 275 ELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG 334
++ + Y + +EA + T P E F L G
Sbjct: 352 RCTEKEFVSGY------KYGVEAVQEPLT-------------PEE-------FLLAKG-- 383
Query: 335 GVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYT 390
T+ LV ++ RD +A+ DES +F+++D+ ++ + P++ +++
Sbjct: 384 -----IEPTESLV-KIVMLRDFIAKQEDESPQFLMTDRQLVRFIKEQPSSPEQIFS 433
>gi|418746085|ref|ZP_13302416.1| 3'-5' exonuclease [Leptospira santarosai str. CBC379]
gi|410792916|gb|EKR90840.1| 3'-5' exonuclease [Leptospira santarosai str. CBC379]
Length = 388
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + L + +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLINLGQADSLSVDTESSGYYTYFSKVCLIQISAKGKNYILD 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F + + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLRN-LDGLGTLFENKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWGKMKDELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIASEEPGGEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQG-----------GVSSISS 341
+V+ E + G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDMTKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQKNP 340
>gi|418752957|ref|ZP_13309213.1| 3'-5' exonuclease [Leptospira santarosai str. MOR084]
gi|422002805|ref|ZP_16350040.1| ribonuclease D [Leptospira santarosai serovar Shermani str. LT 821]
gi|409966640|gb|EKO34481.1| 3'-5' exonuclease [Leptospira santarosai str. MOR084]
gi|417258550|gb|EKT87937.1| ribonuclease D [Leptospira santarosai serovar Shermani str. LT 821]
Length = 388
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 141/341 (41%), Gaps = 62/341 (18%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + ++ V+T L + L + +VDTE ++ LIQIS + ++Y++D
Sbjct: 1 MQINSDYIVVDTIRSLQLVLINLGQADSLSVDTESSGYYTYFSKVCLIQISAKGKNYILD 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ L + + L F + + K+FH + +D+ L++DF N+ DT + +L Q
Sbjct: 61 PLKLRN-LDGLGTLFENKKILKIFHSAIDDIKALKKDFGFQFQNIADTGFSSRLLDHEQY 119
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL------ 276
SL YL++ Y + +K Q+ +W +RPL LQYA D YL I + EL
Sbjct: 120 SLTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWGKMKDELIKRNLY 179
Query: 277 ------------KQQGNENSYCPDDKFNFVLE------------------ASRRSNTVCL 306
++ G E + DKF +LE SR+ N
Sbjct: 180 EEALSEFEKIASEEPGGEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPF 239
Query: 307 QVYTKE--------------IESYPGEAAASSIFFRLLNGQG-----------GVSSISS 341
+V+ E + G+ A ++F N G ++++
Sbjct: 240 RVFNNEKVILLVKSRRDMTKLTEIVGKKDAETLFQIYANPSGPPIQKSELFKKPGENLTN 299
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ +RL WR+ + + S + + S++ I LA K P
Sbjct: 300 EEGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQKNP 340
>gi|115372643|ref|ZP_01459950.1| 3'-5' exonuclease, putative [Stigmatella aurantiaca DW4/3-1]
gi|115370364|gb|EAU69292.1| 3'-5' exonuclease, putative [Stigmatella aurantiaca DW4/3-1]
Length = 379
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
S E A L+ AVD E S+ +F +Q++T + +L DT+A + S+L P
Sbjct: 5 SSAQEAARTLATAGELAVDLEADSMHAFRARLCFLQVATPTDIFLFDTLAPGVDASLLAP 64
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
ADP K FH + D+ +L + I V LFDT +A +L P+ LA + GV
Sbjct: 65 LMADPERTKYFHAAQGDLQFLA-EAGIRVRGLFDTHRAATLLGWPKVGLADIARERLGVE 123
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
K Q+ D+ RPLP EM +Y D YL + +
Sbjct: 124 LPKEHQQSDFSLRPLPPEMREYIANDVRYLCELGR 158
>gi|310823888|ref|YP_003956246.1| ribonuclease d [Stigmatella aurantiaca DW4/3-1]
gi|309396960|gb|ADO74419.1| ribonuclease D [Stigmatella aurantiaca DW4/3-1]
Length = 389
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
S E A L+ AVD E S+ +F +Q++T + +L DT+A + S+L P
Sbjct: 15 SSAQEAARTLATAGELAVDLEADSMHAFRARLCFLQVATPTDIFLFDTLAPGVDASLLAP 74
Query: 176 FFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA 235
ADP K FH + D+ +L + I V LFDT +A +L P+ LA + GV
Sbjct: 75 LMADPERTKYFHAAQGDLQFLA-EAGIRVRGLFDTHRAATLLGWPKVGLADIARERLGVE 133
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAK 270
K Q+ D+ RPLP EM +Y D YL + +
Sbjct: 134 LPKEHQQSDFSLRPLPPEMREYIANDVRYLCELGR 168
>gi|410624162|ref|ZP_11334969.1| ribonuclease D [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410156244|dbj|GAC30343.1| ribonuclease D [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 388
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 28/284 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +++T L++ ++ A+DTE R+ + LIQ+ + L+D +AL
Sbjct: 2 NFEYIDTPEALSDYCARIATADALAIDTEFVRTRTLVPQLGLIQVYDGEHLGLIDPVAL- 60
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
D++S +P + KV H D+ L + + LFD+ A +L Q +L Y
Sbjct: 61 DDLSAFNEILVNPSIIKVLHSCSEDLDALWFNLKVIPAPLFDSQFAANLLDMGQ-TLGYA 119
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E V +K R DW RPL E L+YA D YLL + + L A++++ G
Sbjct: 120 NLVEQMLNVHVDKGESRTDWIARPLSVEQLKYAAADVFYLLPVYRQLAAKIQEIGQTEWV 179
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+ F L +R+ P + A SI I + ++
Sbjct: 180 FAESDF---LSLKKRAEV-------------PSDLAYLSI--------KNNWKIGAQSRQ 215
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ + +WR A+ D ++ FVL +Q ++ +A K P N+ ++
Sbjct: 216 ALKEIASWRLQQAQKRDMAINFVLREQGMLEVAMKLPENKAKLF 259
>gi|456877521|gb|EMF92536.1| 3'-5' exonuclease [Leptospira santarosai str. ST188]
Length = 366
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
+VDTE ++ LIQIS + ++Y++D + L + + L F + + K+FH +
Sbjct: 7 LSVDTESSGYYTYFSKVCLIQISAKGKNYILDPLKLRN-LDGLGTLFENKKILKIFHSAI 65
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ L++DF N+ DT + +L Q SL YL++ Y + +K Q+ +W +RPL
Sbjct: 66 DDIKALKKDFGFQFQNIADTGFSSRLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPL 125
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAEL------------------KQQGNENSYCPDDKFN 292
LQYA D YL I + + EL ++ G E + DKF
Sbjct: 126 EKSQLQYAALDTVYLETIWEKMKDELIKRNLYEEALSEFEKIASEEPGGEGNSISMDKFP 185
Query: 293 FVLE------------------ASRRSNTVCLQVYTKE--------------IESYPGEA 320
+LE SR+ N +V+ E + G+
Sbjct: 186 EILEYSADERRFIYDTLVFRDDKSRKLNKAPFRVFNNEKVILLVKSRRDMTKLTEIVGKK 245
Query: 321 AASSIFFRLLNGQG-----------GVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
A ++F N G ++++ + +RL WR+ + + S + +
Sbjct: 246 DAETLFQIYANPSGPPIQKSELFKKPGENLTNEEGERFKRLRIWRETIMSIRRMSHQMMP 305
Query: 370 SDQAIIALANKAP 382
S++ I LA K P
Sbjct: 306 SNKMIAELAQKNP 318
>gi|257791482|ref|YP_003182088.1| ribonuclease D [Eggerthella lenta DSM 2243]
gi|317490632|ref|ZP_07949102.1| ribonuclease D [Eggerthella sp. 1_3_56FAA]
gi|325831419|ref|ZP_08164673.1| ribonuclease D [Eggerthella sp. HGA1]
gi|257475379|gb|ACV55699.1| ribonuclease D [Eggerthella lenta DSM 2243]
gi|316910256|gb|EFV31895.1| ribonuclease D [Eggerthella sp. 1_3_56FAA]
gi|325486673|gb|EGC89121.1| ribonuclease D [Eggerthella sp. HGA1]
Length = 381
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 26/288 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ + L A A+DTE +++ LIQ++T+ E +VD A+ D+
Sbjct: 1 MYIANQENLAAFAERAMHSSVLAIDTEFLREKTYYAKLCLIQLATDDETAIVDPFAV-DD 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLL 228
+ +L P + V K+FH + D+ L R+ + LFDT A +L Q+ A L+
Sbjct: 60 LKVLAPVLRNENVMKLFHAGNQDLEILLREVGVLPHPLFDTQVAAALLGHTQQIGYAALV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
CGV K DW +RPL L+YA D YL + + + A+L + G + D
Sbjct: 120 HAECGVTLKKIDSFTDWSRRPLSDSQLEYAADDVVYLPRMYERMRAQLVELGRLSWL--D 177
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
F + + +R + E E Y S + R L+ R
Sbjct: 178 RDFEDLADPARYA--------ANERERYKRLKRVSQLSRRQLSA--------------AR 215
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
+ AWR+L A+ D ++V++D+ I+ + P + D++ +D
Sbjct: 216 EVAAWRELEAQRRDVPRKWVVTDEQIVEACKREPRSIDDLFMVRGLSD 263
>gi|196232584|ref|ZP_03131436.1| 3'-5' exonuclease [Chthoniobacter flavus Ellin428]
gi|196223346|gb|EDY17864.1| 3'-5' exonuclease [Chthoniobacter flavus Ellin428]
Length = 352
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T L + L+ +DTE SL + LIQIS D L+D +A IS
Sbjct: 5 IDTAEALQAVPPLLAPHPRIPIDTEADSLHCYFEKLCLIQISVPGHDLLIDPLA---GIS 61
Query: 172 ILQPFF-ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLET 230
LQP F A G + HG+D D+ L+R +FDT A + + SLA L++
Sbjct: 62 -LQPLFEAFAGKELIIHGADYDLRLLRRVGFTVTAPVFDTMIAARLCGIEEFSLAALIKR 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
Y VA K Q+ +W +RPL +M YA D HYLL IA L AEL +
Sbjct: 121 YFDVALTKASQKANWARRPLSPQMADYAVKDTHYLLEIAGILEAELTR 168
>gi|355686733|gb|AER98167.1| exonuclease 3'-5' domain containing 2 [Mustela putorius furo]
Length = 85
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 552 FEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVL 611
FEP GRPE G ++Y+ K+N+CV CG+ + Y+R +IP YR HFP ++K H SHD++L
Sbjct: 1 FEPAGRPESPG-DYYLMVKENLCVVCGKKDSYIRKNVIPHEYRKHFPIEMKDHNSHDVLL 59
Query: 612 LCVDCHEVAHAAAEKYKKQISAEF 635
LC CH V++ K+Q++ EF
Sbjct: 60 LCTSCHAVSNYYDNHLKQQLAREF 83
>gi|139437245|ref|ZP_01771405.1| Hypothetical protein COLAER_00384 [Collinsella aerofaciens ATCC
25986]
gi|133776892|gb|EBA40712.1| ribonuclease D [Collinsella aerofaciens ATCC 25986]
Length = 377
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 43/329 (13%)
Query: 126 SKEF-FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCK 184
++EF AVDTE R+F L+QI+T E VD + + D++S L AD V K
Sbjct: 16 AREFDAIAVDTEFLRERTFHPRLCLVQIATPAESVAVDPLVI-DDLSPLAELMADESVTK 74
Query: 185 VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVATNKFLQRE 243
VFH D+ + + +FDT A L + Q+ S L++T+CGV+ K
Sbjct: 75 VFHACSQDMEVMLHTVGVLPRPIFDTQVAAAFLGERQQISYGALVQTFCGVSLPKTESLT 134
Query: 244 DWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNT 303
DW +RPL + ++YA D YL+ +++ L++ G + ++VL+
Sbjct: 135 DWSRRPLTDKQIEYAIDDVKYLIVAYTEMMSRLRELG---------RVDWVLD------- 178
Query: 304 VCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDE 363
E+ E+ + ++S S + R L AWR+ A +
Sbjct: 179 --------ELRPLADESHYRADRHEAFRKVKRINSCSRHQLGIARELAAWREDRAERRNI 230
Query: 364 SLRFVLSDQAIIALANKAPANRTDVYTTIAQADS----DVDCLNLSSSLPSPSP------ 413
++V+SD ++AL + P R + + +I D DVD ++ + P
Sbjct: 231 PRKWVMSDDTLLALVKRNPV-RVEEFRSIRGTDQLGERDVDGALMAIKRGASCPHDRLPL 289
Query: 414 VVCSHLDDVERQVCNNVENLDDILLANLQ 442
+V H RQ+ +E++ D++ A ++
Sbjct: 290 MVRGH-----RQISPELESVTDLMYALIR 313
>gi|421110867|ref|ZP_15571356.1| 3'-5' exonuclease [Leptospira santarosai str. JET]
gi|410803772|gb|EKS09901.1| 3'-5' exonuclease [Leptospira santarosai str. JET]
Length = 366
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 62/313 (19%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
+VDTE ++ LIQIS + ++Y++D + L + + L F + + K+FH +
Sbjct: 7 LSVDTESSGYYTYFSKVCLIQISAKGKNYILDPLKLRN-LDGLGTLFENKKILKIFHSAI 65
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
+D+ L++DF N+ DT + +L Q SL YL++ Y + +K Q+ +W +RPL
Sbjct: 66 DDIKALKKDFGFQFQNIADTGFSSRLLDHEQYSLTYLVDYYHKIKLSKKEQKSNWEKRPL 125
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAEL------------------KQQGNENSYCPDDKFN 292
LQYA D YL I + EL ++ G E + DKF
Sbjct: 126 EKSQLQYAALDTVYLETIWGKMKDELIKRNLYEEALSEFEKIASEEPGGEGNSISMDKFP 185
Query: 293 FVLE------------------ASRRSNTVCLQVYTKE--------------IESYPGEA 320
+LE SR+ N +V+ E + G+
Sbjct: 186 EILEYSADERRFIYDTLVFRDDKSRKLNKAPFRVFNNEKVILLVKSRRDMTKLTEIVGKK 245
Query: 321 AASSIFFRLLNGQG-----------GVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
A ++F N G ++++ + +RL WR+ + + S + +
Sbjct: 246 DAETLFQIYANPSGPPIQKSELFKKPGENLTNEEGERFKRLRIWRETIMSIRRMSHQMMP 305
Query: 370 SDQAIIALANKAP 382
S++ I LA K P
Sbjct: 306 SNKMIAELAQKNP 318
>gi|355575967|ref|ZP_09045340.1| ribonuclease D [Olsenella sp. oral taxon 809 str. F0356]
gi|354817183|gb|EHF01693.1| ribonuclease D [Olsenella sp. oral taxon 809 str. F0356]
Length = 376
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
AVDTE R++ LIQ++T E VD I + D ++ L+ D V KVFH
Sbjct: 21 VLAVDTEFLRERTYFPRLCLIQVATADESCAVDPILIED-LTPLRRLLEDRSVTKVFHAC 79
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWRQR 248
D+ + +FDT A L + Q L+E CGV K DW +R
Sbjct: 80 TQDLEVILDGMGCVPAPVFDTQLAAAFLGHRQQIGYGALVEACCGVRLPKAESLTDWSRR 139
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PL AE L+YA+ D YL I + +V+EL ++ D+ + LE RS T +V
Sbjct: 140 PLDAEQLRYAEDDVIYLPRIYEQMVSELARR---------DRLAW-LEPEMRSLTDPSRV 189
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
++Y ++S+ R L+ + R CAWR+ A + ++V
Sbjct: 190 ERDPRDAYLHLKRSNSLTRRQLS--------------VAREACAWREREAARRNIPRKWV 235
Query: 369 LSDQAIIALANKAP 382
+SD+ ++ L +AP
Sbjct: 236 VSDEVLVELCKRAP 249
>gi|33152538|ref|NP_873891.1| ribonuclease D [Haemophilus ducreyi 35000HP]
gi|33148762|gb|AAP96280.1| ribonuclease D [Haemophilus ducreyi 35000HP]
Length = 373
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 34/287 (11%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ W++T +L + S + A+DTE RS+ LIQ+ ++ L+D + D
Sbjct: 7 YKWIDTNEKLATVCQQASDKTAIALDTEFIRTRSYYPKFGLIQLFDGEQTSLIDPTTISD 66
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
+ + A+P + KV H D+ Q F+ + L DT + S S+ +
Sbjct: 67 FLPFID-LLANPNIVKVLHACSEDLEIFQHQFNQALTPLIDT-QIMAAFSGLGLSIGFAK 124
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ---QGNEN 283
L+ Y + +K R DW RPL LQYA D +YLL I + L AEL Q Q N
Sbjct: 125 LVNHYLNIELDKGASRTDWLARPLTETQLQYAAADVYYLLPIYQKLQAELAQTNWQEAVN 184
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
C L ++R+ T+ L KEI S + L Q +
Sbjct: 185 QECQ-------LLVNKRNKTLELNDAYKEI----------SYAWTLTRQQLAI------- 220
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYT 390
++ L WR AR D +L FV+ +Q++I +A P + + + T
Sbjct: 221 ---LKLLAKWRIEEARKRDLALNFVIKEQSLIEIAKSQPKHTSQLLT 264
>gi|242003018|ref|XP_002422581.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
gi|212505371|gb|EEB09843.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
Length = 522
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 504 KSPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVE--DNPPAIMLLFEPKGRPED- 560
K+ Y C IY + +LLC CD KK WY+ + LA + D+ I LLFEP GR
Sbjct: 258 KTDYYEKCYIYDPNKKLLCSCDYKKAMWYVNKGLANITHKSDSNIKIQLLFEPAGRANTI 317
Query: 561 EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVA 620
E ++Y Q K+N CV CG Y R+ ++P Y I CHE A
Sbjct: 318 EEEKYYTQLKQNCCVVCGHNTSYSRHYVVPREYSI--------------------CHEKA 357
Query: 621 HAAAEKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALL 680
KK +S PL H N ++G +++R+ A LL
Sbjct: 358 VEKGNILKKSLSILCKAPL--HN-----------------NNRQSGKLQVKIRSYARTLL 398
Query: 681 HHGPTMPSNRREELRRIVMRYYGGREISQEDLERA 715
+G + ++ + I++ Y+G +++Q+ L+ A
Sbjct: 399 SNGDKISWEKKALMVEIILLYFGESKVTQKLLKDA 433
>gi|340504598|gb|EGR31027.1| hypothetical protein IMG5_119000 [Ichthyophthirius multifiliis]
Length = 236
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 535 RDLAKLVEDNPPAIMLLFEPKGRPEDEG--------NEFYIQSKKNICVSCGEGNHYLRY 586
+ LA LV NP I L F P G+ E N FY ++N CV CG+ Y ++
Sbjct: 5 KKLAVLVSSNPSVIQLNFNPSGKGHSELEEELIESENYFYQTERENKCVVCGQDEKYTKF 64
Query: 587 RIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGI 637
I+PS YR HFP + KSHRS D++LLC+ CHE A +E+ K + ++ +
Sbjct: 65 YIVPSFYRRHFPVKYKSHRSFDVLLLCLKCHEKAGKNSERLKAYVLQKYSV 115
>gi|289207511|ref|YP_003459577.1| ribonuclease D [Thioalkalivibrio sp. K90mix]
gi|288943142|gb|ADC70841.1| ribonuclease D [Thioalkalivibrio sp. K90mix]
Length = 392
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 27/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ET L ++++ + A+DTE +++ L+Q +T + +D + L +I
Sbjct: 7 IETPEALQAFLDSIAGTDWIALDTEFLREKTYYPQLCLVQAATLDQLACIDPLRL--DIQ 64
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L P F DPG+ KVFH + D+ L R+ +FDT A +L Q A L++T
Sbjct: 65 QLAPLFRDPGITKVFHAASQDMELLYRELGFVPSPVFDTQIAASMLGYGEQVGYANLVKT 124
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+K R DW +RPL AE ++YA D +L + L+ EL D+
Sbjct: 125 VLERDLDKSQTRTDWSRRPLSAEQIRYAADDVRHLATLFNRLLHELDTH---------DR 175
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
+++ E+E+ A + GV + + +++ +
Sbjct: 176 MHWL---------------RPEMEALSNPALYEPDPEQSWQRVSGVKRLKPKERGVLKCV 220
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
AWR+ A+ + R+VLSD ++ +A + PA+
Sbjct: 221 AAWRERTAQSSNRPRRWVLSDDLLLDIARRTPAD 254
>gi|407715500|ref|YP_006836780.1| ribonuclease D [Cycloclasticus sp. P1]
gi|407255836|gb|AFT66277.1| Ribonuclease D [Cycloclasticus sp. P1]
Length = 383
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+++T QL+E N + E + A+DTE +++ ALIQI+T ++D IA +I
Sbjct: 6 YIDTNEQLSEFCNTIKNEPWLAIDTEFQREKTYRSILALIQIATADIVAIIDPIAC--DI 63
Query: 171 SILQPFFADPGVCKVFHGS--DNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYL 227
L + + KVFH + D ++ + R + V FDT A +L P Q A L
Sbjct: 64 KPLLDILYNQNILKVFHAARQDQEIFYDLRGKPLAPV--FDTQIAAPILGHPEQAGYARL 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ GV +K R DW +RPL E + YA D YL + L +LK++ N P
Sbjct: 122 VDDILGVQLSKAHSRTDWLRRPLSEEQITYAADDVIYLAKLYPLLENQLKEKDRLNWLAP 181
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI-FFRLLNGQGGVSSISSVTQDL 346
F + + S SN P E A I + L G G +S++
Sbjct: 182 --AFADLCKPSLYSN--------------PPELAWKRIRAAKRLKG-GALSAL------- 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++L WR+ +A+ D +++ D +I +A P N
Sbjct: 218 -QKLAEWREDLAQQKDIPRGWIIKDDILIEVAKLKPTN 254
>gi|223939512|ref|ZP_03631388.1| 3'-5' exonuclease [bacterium Ellin514]
gi|223891784|gb|EEF58269.1| 3'-5' exonuclease [bacterium Ellin514]
Length = 372
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+++ L L LS + A+DTE SL ++ L+QI+T D L+D ++ +
Sbjct: 18 IDSDVTLKNLLGRLSSTPWVALDTEADSLHAYPEKVCLLQITTPLGDELIDPLSGINLDP 77
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN-LFDTAKACEVLSKPQKSLAYLLET 230
+L F G + HGSD D+ L R H +V +FDT A +L Q L +L+
Sbjct: 78 LLDTFG---GHELIMHGSDYDLR-LLRKHHAFVPKAIFDTMLASRLLGHTQFGLVHLVAH 133
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
Y GV K Q+ DW +RPL M YA+ D HYL ++A L ++L+ +G
Sbjct: 134 YLGVTLEKGSQKADWAKRPLTPRMEAYARNDTHYLKHLADRLKSDLEVKG 183
>gi|261414901|ref|YP_003248584.1| 3'-5' exonuclease [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385789866|ref|YP_005820989.1| putative ribonuclease D [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371357|gb|ACX74102.1| 3'-5' exonuclease [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327506|gb|ADL26707.1| putative ribonuclease D [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 386
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 29/289 (10%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
+ + ++ V+++ L L L AVDTE S+ + LIQI+ + Y+VD +
Sbjct: 3 KDEKYILVDSEESLANLLADLELYDMAAVDTEADSMYHYTARLCLIQITIGEHHYIVDPL 62
Query: 165 ALHDEISILQPFF-ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
D L P F A +FHG+D D+ L + + ++FDT A ++L +
Sbjct: 63 CGLD----LAPLFKARAMQTLIFHGADYDLRLLWQTYGFSPKSIFDTMLAAKILGEQHLG 118
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
LA L++ Y G K QR DW RPL +M +YA D YL + L +L+Q G N
Sbjct: 119 LADLVKEYFGDELKKENQRADWTIRPLSLDMCEYAIHDTFYLHELCAILAEKLQQAGRMN 178
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
++ N ++E +R N + P SSI+ S
Sbjct: 179 WLT--EQCNTLIEHARTPNAP---------KKDPWRITGSSIY-------------SPCA 214
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
++++ L WR+ A D V+ + ++A+ N ++ +V T
Sbjct: 215 LNILKHLWEWREKQAEELDRPPYKVMQSELMLAIVNAQNSHFPEVSETF 263
>gi|227355430|ref|ZP_03839826.1| ribonuclease D [Proteus mirabilis ATCC 29906]
gi|227164417|gb|EEI49301.1| ribonuclease D [Proteus mirabilis ATCC 29906]
Length = 399
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 30/300 (10%)
Query: 94 FDFSNVDLDLQRSD----SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
F F+ LD++ + ++ ++ T + L ++ A S+ A+DTE +R++ L
Sbjct: 11 FVFTKKSLDIKTQEKPVLNYQFITTNTALEDVCKAASEVSQIALDTEFVRIRTYYPHLGL 70
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQ+ K+ L+D + + + ++ +P V K H D+ F + D
Sbjct: 71 IQMYDGKQISLIDPLTITEWTPFVE-LLTNPAVLKYLHAGSEDLEVFSHQFGCVPTPMID 129
Query: 210 TAKACEVLSKPQK-SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
T L P A L+E Y +A +K R DW RPL + QYA D YLL +
Sbjct: 130 TQVVAAFLGYPISCGFATLVEKYEHIALDKSESRTDWLARPLTEKQCQYASGDVFYLLPL 189
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
AK L+A+ ++ G ++ D+ + A RR TV ++ ++I
Sbjct: 190 AKKLIAQAQEAGYMDAIV--DECEMI--AERRQETVSPELAYRDI--------------- 230
Query: 329 LLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
G + ++ L WR AR D +L FV+ ++ + ++A P + ++
Sbjct: 231 -----GNAWQLRGQQLACLKMLAEWRLNQARARDMALNFVVREEHLWSVARYLPTSLAEL 285
>gi|407852699|gb|EKG06057.1| hypothetical protein TCSYLVIO_002860 [Trypanosoma cruzi]
Length = 806
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYL-TRDLAKLVE-------------DNPPAIMLL 551
P Y N +Y + RL+ D+ K EWY+ + L K++E AI L
Sbjct: 367 PYYDNIFVYDAEMRLVFTVDKSKAEWYVYKKGLGKVIEWRETAVEETQKTEKEIAAIQLN 426
Query: 552 FEPKGRPEDEGN-----EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRS 606
F P ++ + +++ Q+K+N CV CGE +R+ ++P YR +FP SH S
Sbjct: 427 FSPDLSKYNDAHIRRNLDYFRQAKENQCVVCGEKKDLVRFAVVPLAYRKYFPSVYMSHNS 486
Query: 607 HDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPL--FIHKVADSRKAEARPGFSASITN 662
+D++LLC C A ++ +++++ +FG+PL K + +A+ + S +I+N
Sbjct: 487 YDLLLLCTVCFARARRLYDEERRRVAVDFGVPLGHLTPKELELHRAQLQQQMSTNISN 544
>gi|254514489|ref|ZP_05126550.1| ribonuclease D [gamma proteobacterium NOR5-3]
gi|219676732|gb|EED33097.1| ribonuclease D [gamma proteobacterium NOR5-3]
Length = 372
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 120/287 (41%), Gaps = 46/287 (16%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ VE+ L E +ALS AVDTE ++ AL+Q+ ++ +L+D + +
Sbjct: 2 TWTLVESDEALAEALDALSNASEIAVDTEFMRRNTYYPHIALLQLCSDDHAWLIDPLKVT 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
D + L+ D G KV H D+ + + L DT +A +L K L Y
Sbjct: 62 D-LDGLRALMTDTGCWKVLHSCSEDLEVFRHWLGVVPSPLIDTQRATALLGK-GFGLGYR 119
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E GV +K R DW +RPL YA D L+ K L QG
Sbjct: 120 ALIELLLGVELDKGETRSDWLKRPLSDSQCHYAALDVLKLVPAWKILKDLALSQG----- 174
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQG--------GVS 337
+ ++L+ GE A RLLN + S
Sbjct: 175 ----RMEWILDE--------------------GEEA-----IRLLNERDRDIYRRVKSAS 205
Query: 338 SISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+S D +RRLC WR+ +AR D+ +++ D+A IA+A PA+
Sbjct: 206 RLSPRQLDALRRLCEWREALARSVDKPRGWIVEDKACIAIAQSMPAD 252
>gi|389585358|dbj|GAB68089.1| 3'-5' exonuclease domain containing protein [Plasmodium cynomolgi
strain B]
Length = 1136
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 39/264 (14%)
Query: 53 FKRVLAD-NSYSPFKHANKEKSSGSHPYELEITALLENPRPEFD-----FSNVDLDLQRS 106
KR+ D N Y P + S+ HPY EI ++ N E+D F V +LQ+
Sbjct: 412 LKRLDKDINKYGP------QFSNLGHPYNYEINDMI-NRYHEWDESVSPFVKVTPELQKP 464
Query: 107 DSFVWVETK-----SQLNELANAL----SKEFFFAVDTEQHSLRSFLGFTALIQISTEKE 157
E K +L E+ + + SK V +++ R GFT+LI + TE+
Sbjct: 465 VQLSEKECKIISNEGELVEMVHTIKEKCSKMSLSLVVNYKNTYR---GFTSLILVGTEEC 521
Query: 158 DYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL 217
DY++DT+ + +++ L DP + K+ + S N +Q+DF IY VN+ D + + L
Sbjct: 522 DYIIDTLHMFEQMHELNEVTTDPNILKILYKSKNITPVMQKDFSIYFVNIIDISICSDFL 581
Query: 218 SKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
S + SL YL+ Y V+ N + RPL +M+ +T HYL Y+ + + +L
Sbjct: 582 S-VRNSLPYLVHNYFHVSVNSAGHGLNALTRPLSPDMVHNLRTPFHYLYYLFEYVKTDL- 639
Query: 278 QQGNENSYCPDDKFNFVLEASRRS 301
FN++ RR+
Sbjct: 640 ------------YFNYIFAHYRRA 651
>gi|313238124|emb|CBY13222.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 27/254 (10%)
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
A+DTE SL + LIQ S + E L+D + + D +S L + ++ V HG+D
Sbjct: 25 AIDTEADSLHRYRESLCLIQFSAKGESVLIDPLVIED-LSPLGSYLSEATVW--MHGADY 81
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ +R F ++DT +L + L L+ Y GV +K Q+ DW +RPL
Sbjct: 82 DMTMFKRQFGDLPKVVYDTQIGARLLGARRFGLGDLVSLYFGVELSKSSQKADWGKRPLS 141
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTK 311
+M++YA D HYLL + +V +LK G ++ + LE+ + L
Sbjct: 142 PKMIEYALNDVHYLLEMGDLIVTKLKDLG---------RYEWFLESCTAARRRVLDRDDS 192
Query: 312 EIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSD 371
+ E++ + G G + ++ L WRD AR D V+ +
Sbjct: 193 KEETWR------------IQGSGKLDRRGLA---FLKELWTWRDSEARSWDRPSFMVVPN 237
Query: 372 QAIIALANKAPANR 385
+ ++ + A R
Sbjct: 238 RQLLEWSVDLAAGR 251
>gi|71417200|ref|XP_810502.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875040|gb|EAN88651.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 842
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYL-TRDLAKLVE-------------DNPPAIMLL 551
P Y N +Y + RL+ D+ K EWY+ + L K++E AI L
Sbjct: 403 PYYDNIFVYDAEMRLVFTVDKSKAEWYVYKKGLGKVIEWRETAAEETQKTEKEIAAIQLN 462
Query: 552 FEPKGRPEDEGN-----EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRS 606
F P ++ + +++ Q+K+N CV CGE +R+ ++P YR +FP SH S
Sbjct: 463 FSPDLSKYNDAHIRRNLDYFRQAKENQCVVCGEKKDLVRFAVVPLAYRKYFPSVYMSHNS 522
Query: 607 HDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPL--FIHKVADSRKAEARPGFSASITN 662
+D++LLC C A ++ +++++ +FG+PL K + +A+ + S +I+N
Sbjct: 523 YDLLLLCTVCFARARRLYDEERRRVAVDFGVPLGHLTPKELELHRAQLQQQMSTNISN 580
>gi|336317481|ref|ZP_08572333.1| ribonuclease D [Rheinheimera sp. A13L]
gi|335878103|gb|EGM76050.1| ribonuclease D [Rheinheimera sp. A13L]
Length = 381
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 119/267 (44%), Gaps = 40/267 (14%)
Query: 131 FAVDTE---QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
AVDTE Q +L LG LIQ+ K+ LVD +A+ D+ S LQ FA+P VCKV H
Sbjct: 25 LAVDTEFVRQTTLYPKLG---LIQLFDGKQLVLVDPLAI-DDWSSLQQLFANPSVCKVVH 80
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWR 246
+ D+ L + ++ L DT A E+ + A L++ C + +K R DW
Sbjct: 81 SCNEDLEALATQDLLPILPLIDTQLAAELAGWGGSQGYAKLVQRVCAIELDKSESRTDWI 140
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCL 306
RPL A L YA D +LL + + L AEL + + + + +RRS + L
Sbjct: 141 ARPLSALQLDYAAKDVEHLLDVYQALKAELVAKNQYDLLLAEGEHLI----ARRSFALPL 196
Query: 307 QVYTKEIES----YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHD 362
E+++ P E A ++R L WR A+ HD
Sbjct: 197 SFRHLELKNSNLLTPRELA------------------------ILRELVIWRQEYAQQHD 232
Query: 363 ESLRFVLSDQAIIALANKAPANRTDVY 389
+L F+ D ++ +A + P + ++
Sbjct: 233 MALGFIFKDHHLLDIAKRRPGSLESMF 259
>gi|407418656|gb|EKF38221.1| hypothetical protein MOQ_001573, partial [Trypanosoma cruzi
marinkellei]
Length = 750
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 21/178 (11%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYL-TRDLAKLVE-------------DNPPAIMLL 551
P Y N +Y + RL+ D+ K EWY+ + L K++E AI L
Sbjct: 319 PYYDNIFVYDAEMRLVFTVDKSKAEWYVYKKGLGKVIEWRENAVEETKKTETEIAAIQLN 378
Query: 552 FEPKGRPEDEGN-----EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRS 606
F P ++ + +++ Q+K+N CV CGE +R+ ++P YR +FP SH S
Sbjct: 379 FIPDLSKYNDAHIRRNLDYFRQAKENQCVVCGETKDLVRFAVVPLAYRKYFPSVYMSHNS 438
Query: 607 HDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPL--FIHKVADSRKAEARPGFSASITN 662
+D++LLC C A ++ +++++ +FG+PL K R+A+ + S + +N
Sbjct: 439 YDLLLLCTACFSRARQLYDEERRRVAVDFGVPLGHLTPKEVKLRRAQLQQQISTNSSN 496
>gi|254443317|ref|ZP_05056793.1| 3'-5' exonuclease domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198257625|gb|EDY81933.1| 3'-5' exonuclease domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 370
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
D F++V+ + +L +L + L+K+ A+D+E +L F L+Q+ + YL+D A
Sbjct: 4 DGFIYVDKQDELEDLCDHLAKQAEIALDSEADNLHHFETKLCLLQLRFDGTIYLLDVTA- 62
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
++ + + + G+ + HGSD D+ + +LFD+ A ++L + LA
Sbjct: 63 --DLDLDRFWEILSGLHLIMHGSDFDLRLFEEFCGFEAKSLFDSMLASQLLGIKRIGLAA 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
LLE GV K Q+ DW QRPL +ML+YA TD YL + L+A + + G
Sbjct: 121 LLEENFGVKIPKDSQKSDWSQRPLTPKMLKYAATDVLYLHELRDKLMARIDELG 174
>gi|146173426|ref|XP_001018834.2| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|146144882|gb|EAR98589.2| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 634
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 22/325 (6%)
Query: 78 PY-ELEITALLENPRPEFDFSNVDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTE 136
PY E+ L N + F F D D +S S ++++T + N + L D
Sbjct: 64 PYNEIRFFQNLRNIQACFTF---DFDKDQSKS-LYIKTDQEFNRMLELLRNAGVICWDVH 119
Query: 137 QHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWL 196
++ RSF GF ++IST +DY++D ++L +EI L+ F D + K+ + WL
Sbjct: 120 FNTYRSFYGFVCFLEISTIDQDYIIDCLSLRNEIHRLKEIFLDKQIVKITLDLQEKINWL 179
Query: 197 QRDFHIY-VVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEML 255
RDF I +VN D + + L+ P ++YL T K LQ D+R+RPL +
Sbjct: 180 YRDFGILNIVNSIDLSLYLKELNLP-SIISYLCGTLLNYPFQKILQNFDYRKRPLSLNEI 238
Query: 256 QYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES 315
Y + +++ L I L + K + S+ ++ + L K++E+
Sbjct: 239 NYLRAFSYFPLRILSILTNNILS-------IEKSKLEELFNKSQLASCLSL----KQLEN 287
Query: 316 YPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
E F + + Q +R++ WR A++ DES+ ++ I
Sbjct: 288 LLQENLIEKHFEMFCIDRN----YNEQQQYFLRKILKWRIQRAKLEDESVEYIFPACIIE 343
Query: 376 ALANKAPANRTDVYTTIAQADSDVD 400
+ P + V + + +++
Sbjct: 344 KFISVYPTSSQQVLDELVKYQQEIN 368
>gi|308234516|ref|ZP_07665253.1| ribonuclease D [Atopobium vaginae DSM 15829]
gi|328944110|ref|ZP_08241575.1| ribonuclease D [Atopobium vaginae DSM 15829]
gi|327492079|gb|EGF23853.1| ribonuclease D [Atopobium vaginae DSM 15829]
Length = 376
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 30/278 (10%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ET QL +K A+DTE ++F LIQ++T E LVD +++ D
Sbjct: 1 MYIETYEQLASFCERATKSDVLAIDTEFMREKTFYPKLCLIQLATRSEIVLVDPLSIPD- 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L F D + K+FH D+ + F +FDT A L + Q L+
Sbjct: 60 LTDLCKLFLDKKITKIFHACSQDLELIYDIFSCLPKPVFDTQVAAAFLGHRFQIGYGPLV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ C V K DW +RPL E L+YA D YL + L+ ELK++
Sbjct: 120 DALCHVHLPKAESLTDWTRRPLAEEQLEYAADDVRYLPRMYDTLLHELKEK--------- 170
Query: 289 DKFNFVLEASRRSNTVCLQ--VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+++ + LE + VC + V K E+Y + R +SS++ +
Sbjct: 171 ERYAWFLE---EMHEVCNEHHVIKKPQEAY--------LHMR------RISSLTRKQLAI 213
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
R + WRD++A D ++V+ D+ +I L P
Sbjct: 214 AREIGIWRDVIASHKDIPRKWVIPDEIVIDLCKSVPKT 251
>gi|256827062|ref|YP_003151021.1| ribonuclease D [Cryptobacterium curtum DSM 15641]
gi|256583205|gb|ACU94339.1| ribonuclease D [Cryptobacterium curtum DSM 15641]
Length = 399
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 28/277 (10%)
Query: 102 DLQRSDSF--VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
DL R + F V++ +++L A A+DTE +++ L+Q+ T+ E
Sbjct: 9 DLSRLEGFHSVFITDQAELEAFAKRALDSSVLAIDTEFLREKTYYARLCLLQMQTDDETI 68
Query: 160 LVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK 219
+VD A+ D + +L P F + K+ H D+ L R+ + LFDT A +L
Sbjct: 69 IVDPFAVSD-LGVLAPLFQSSSIMKIVHSGRQDLEILNREVGLLPQPLFDTQVAAALLGH 127
Query: 220 PQK-SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
Q+ L+ CGV K DW +RPL A + YA D YL + + EL++
Sbjct: 128 TQQIGYGSLVSAVCGVQLAKMDSFTDWSRRPLSASQISYAADDVIYLPQLYHTMTDELER 187
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
G + PD F +++ + +Y + P + +R L G
Sbjct: 188 LGRIHWLDPD--FAALIDPA---------LYVDD----PRDR------YRRLKRVG---Q 223
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAII 375
+S R + AWR+ AR D ++V++D+ ++
Sbjct: 224 LSRRQLSAAREVAAWREKRARDRDIPRKWVMTDEQVV 260
>gi|197285028|ref|YP_002150900.1| ribonuclease D [Proteus mirabilis HI4320]
gi|425067962|ref|ZP_18471078.1| ribonuclease D [Proteus mirabilis WGLW6]
gi|425072637|ref|ZP_18475743.1| ribonuclease D [Proteus mirabilis WGLW4]
gi|194682515|emb|CAR42495.1| ribonuclease D [Proteus mirabilis HI4320]
gi|404596842|gb|EKA97359.1| ribonuclease D [Proteus mirabilis WGLW4]
gi|404600700|gb|EKB01130.1| ribonuclease D [Proteus mirabilis WGLW6]
Length = 372
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ ++ T + L ++ A S+ A+DTE +R++ LIQ+ K+ L+D + +
Sbjct: 2 NYQFITTNTALEDVCKAASEVSQIALDTEFVRIRTYYPHLGLIQMYDGKQISLIDPLTIT 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAY 226
+ ++ +P V K H D+ F + DT L P A
Sbjct: 62 EWTPFVE-LLTNPAVLKYLHAGSEDLEVFSHQFGCVPTPMIDTQVVAAFLGYPISCGFAT 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E Y +A +K R DW RPL + QYA D YLL +AK L+A+ ++ G ++
Sbjct: 121 LVEKYEHIALDKSESRTDWLARPLTEKQCQYASGDVFYLLPLAKKLIAQAQEAGYMDAIV 180
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
D+ + A RR TV ++ ++I G +
Sbjct: 181 --DECEMI--AERRQETVSPELAYRDI--------------------GNAWQLRGQQLAC 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADS 397
++ L WR AR D +L FV+ ++ + ++A P T++A+ D+
Sbjct: 217 LKMLAEWRLNQARARDMALNFVVREEHLWSVARYLP-------TSLAELDA 260
>gi|302335597|ref|YP_003800804.1| ribonuclease D [Olsenella uli DSM 7084]
gi|301319437|gb|ADK67924.1| ribonuclease D [Olsenella uli DSM 7084]
Length = 376
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 111/274 (40%), Gaps = 26/274 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ L ++ A+DTE R++ LIQ +T E +D I L D+
Sbjct: 1 MYISDHEGLTTFCKRVATSRVLAIDTEFLRERTYFPRLCLIQAATPDESAAIDPI-LIDD 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L D + KVFH D+ + H +FDT A L + Q L+
Sbjct: 60 LSPLARLLTDESITKVFHACSQDLEVIYDALHCVPGPIFDTQLAAAFLGHRQQIGYGALV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ CGV K DW +RPL AE L YA+ D YL I ++AEL + P+
Sbjct: 120 DACCGVRLPKAESLTDWSRRPLDAEQLAYAEDDVRYLPGIYDQMMAELIMRDRLPWLAPE 179
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ V P EA + L G S++ + R
Sbjct: 180 ---------------MAELVSPAHFMRVPEEA------YLHLRRSG---SLTRRQLAIAR 215
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+CAWR+ A D ++V+SD+ I+ +AP
Sbjct: 216 EVCAWRESAAARRDVPRKWVVSDELIVEACKRAP 249
>gi|350563555|ref|ZP_08932376.1| ribonuclease D [Thioalkalimicrobium aerophilum AL3]
gi|349778690|gb|EGZ33041.1| ribonuclease D [Thioalkalimicrobium aerophilum AL3]
Length = 390
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 28/284 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEK-EDYLVDTIAL 166
+F + + LN L L + + AVDTE +F ALIQI+T Y++D +++
Sbjct: 2 NFQLITDDTALNTLCIELKQHKWLAVDTEFMRQDTFFAQLALIQIATPTLAVYIIDPLSI 61
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLA 225
+ I + Q F++ + KVFH + D+ L + + +FDT A L Q S A
Sbjct: 62 KNLIPLWQ-LFSNTNITKVFHAARQDLEILYQQAECMPLPIFDTQIASVFLGLGDQASYA 120
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E CG NK R W RPL E L+YA D +L A+ LK
Sbjct: 121 RLIEKLCGENINKDQARTQWLDRPLLDEQLEYAAADVWHL---AQAYPILLKSLTPTQRQ 177
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
FN + + S +Y E P +A + R+ SS+S+
Sbjct: 178 AIQADFNNLTDPS---------LYRTE----PAQA-----WLRM----KPSSSLSNKQLG 215
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
L++ L AWR+ A ++ +++++D+A+I LA + D++
Sbjct: 216 LLKHLAAWREEQAVTLNQPRKWIVNDEALIQLAKRPVREVQDLH 259
>gi|331005546|ref|ZP_08328920.1| Ribonuclease D [gamma proteobacterium IMCC1989]
gi|330420648|gb|EGG94940.1| Ribonuclease D [gamma proteobacterium IMCC1989]
Length = 383
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ W+++ L +L +LS + A+DTE R++ L+QI+ E YL+D +A+
Sbjct: 17 TYQWIDSDVALADLCQSLSTQSAIALDTEFVRTRTYYPHIGLLQIADENGVYLIDPLAIS 76
Query: 168 DEISILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 224
D QP +P + KV H D+ Q F + +LFDT A + S+
Sbjct: 77 DT----QPMADVLQNPAIVKVVHACSEDLEVFQYAFGVLPESLFDTQVAAG-FAGYGSSI 131
Query: 225 AY--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ 279
Y LL + K R DW QRPL L+YA D YLL I + LV +L+QQ
Sbjct: 132 GYANLLREIKRIDIPKQETRSDWLQRPLSDAQLRYAALDVEYLLEIYRGLVEKLQQQ 188
>gi|221059461|ref|XP_002260376.1| 3'-5' exonuclease [Plasmodium knowlesi strain H]
gi|193810449|emb|CAQ41643.1| 3'-5' exonuclease, putative [Plasmodium knowlesi strain H]
Length = 1124
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
++ GFT+LI + TE+ DY++DT+ + ++I L DP + K+ + S N + +Q+DF
Sbjct: 514 TYRGFTSLILVGTEECDYIIDTLYMFEKIHELNDITTDPNILKILYKSKNIIPVMQKDFS 573
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
IY VN+ D + + LS + SL YL+ Y V N + RPL +++ +
Sbjct: 574 IYFVNMIDISVCSDFLS-VRNSLHYLVHNYFHVNVNSAGNGLNALTRPLSPDLVSNLRMP 632
Query: 262 AHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAA 321
HYL Y+ + + +L FN++ RR N + E E +A
Sbjct: 633 FHYLYYLFEYVKTDL-------------YFNYIFAQYRRPNHAEGE---GECEMDTVDAM 676
Query: 322 ASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
++G V +I ++ + L + R++ VH E+++F
Sbjct: 677 DGLDAMDAMDGMDAVDAIDTLERLLDQDRSPQRNVY--VHFENIKF 720
>gi|442323525|ref|YP_007363546.1| putative ribonuclease D [Myxococcus stipitatus DSM 14675]
gi|441491167|gb|AGC47862.1| putative ribonuclease D [Myxococcus stipitatus DSM 14675]
Length = 389
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E S+ +F +Q++T+ + +L+DT+ E +L P +PG K FH +
Sbjct: 30 LAVDLEADSMHAFRARLCFLQVATDSDVFLLDTLQPGVEARLLAPLMGEPGRTKYFHAAQ 89
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ +L + + V LFDT +A +L P+ LA + GV K Q+ D+ RPL
Sbjct: 90 GDLQFLA-EAGVRVRGLFDTHRAATLLGWPKVGLADIAREKLGVELPKEHQQSDFSLRPL 148
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
P M Y D YL + + + ++ G
Sbjct: 149 PPGMRDYIANDVRYLCELGRQVREATREAG 178
>gi|77362412|ref|YP_341986.1| RNase D, processing tRNA s [Pseudoalteromonas haloplanktis TAC125]
gi|76877323|emb|CAI89540.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
haloplanktis TAC125]
Length = 376
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
+ET++QLN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IETQNQLNTFVEQIKNKPVLAIDTEFMRRRTLYPEVALIQVYDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KVFH D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWQILK----DPAVLKVFHSPSEDIEVFQKYAGFVPTPLFDTQFALQILGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++T + +K R +W QRPL + L+YA DA++LL ++ +K
Sbjct: 122 VKTLLDIEIDKSESRTNWLQRPLTNKQLEYAAADAYHLLPCFNLIIDSVKAA-------- 173
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D FN V+ S L +E ++ P E I + ++
Sbjct: 174 -DLFNIVISESE------LVANKREFQT-PDELLYKDI--------KNAWQLRPHELAIL 217
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
R L WR A + +L FVL + + +A + PA+
Sbjct: 218 RELAVWRRNKAIRKNLALNFVLKEHNMTEIAKRGPAS 254
>gi|346310745|ref|ZP_08852758.1| ribonuclease D [Collinsella tanakaei YIT 12063]
gi|345897238|gb|EGX67165.1| ribonuclease D [Collinsella tanakaei YIT 12063]
Length = 377
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 31/295 (10%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T +L+ ++ AVDTE R++ L+Q++T E ++D IA+ D
Sbjct: 1 MYISTYEELSAFCERAARFDAIAVDTEFLRERTYHPRLCLVQVATPDECVVIDVIAI-DN 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L D G KVFH D+ L +FDT A L + Q S ++
Sbjct: 60 LAPLAILMRDEGTVKVFHACSQDMEVLNYTLGALPAPIFDTQVAAAFLGERMQASYNGMV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+CGV K DW +RPL E ++YA D YL+ ++ L + G S+ D
Sbjct: 120 HAFCGVTLPKSESLTDWSRRPLTPEQIEYALDDVRYLIKAYDVIMERLDKSGR-ASWVLD 178
Query: 289 DKFNFVLEASRRSNTVC-LQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ + + RS+ V +V K ++ V+S++ +
Sbjct: 179 E----IKPLTDRSHYVVDRRVAFKRVKR--------------------VNSLTRRQLAVA 214
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP---ANRTDVYTTIAQADSDV 399
R L AWR+ A + ++++SD+ +IAL+ + P A+ V T +D+DV
Sbjct: 215 RELAAWREARAEYSNIPRKWLMSDEVLIALSKRPPHDAASLRRVRGTEQLSDADV 269
>gi|429332849|ref|ZP_19213559.1| ribonuclease D [Pseudomonas putida CSV86]
gi|428762403|gb|EKX84607.1| ribonuclease D [Pseudomonas putida CSV86]
Length = 377
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ S L E + F A+DTE + +F LIQ+ + +L+D + ++D
Sbjct: 7 WITDDSALAEHCRQWRQLPFVALDTEFMRVDTFYPKAGLIQVGDGQRAFLIDPLLIND-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R V LFDT A L+ S+ Y L+
Sbjct: 66 QPLAGLLEDQGVTKVLHACSEDLEVLARLTGSLPVPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + + L +L ++N++ +
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSQTQVSYAAEDAVHLAELYERLRPQLSD--DKNAWVLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D V++ R EI+ Y L +S ++R
Sbjct: 183 DGAELVIQLCR------------EIDPY-----------ELYRDAKLAWKLSRAQLAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+L AR D +L + A+ +A P N
Sbjct: 220 ELCAWRELEARERDVPRNRILREHAMWPIARTQPDN 255
>gi|296117272|ref|ZP_06835863.1| ribonuclease D [Gluconacetobacter hansenii ATCC 23769]
gi|295976165|gb|EFG82952.1| ribonuclease D [Gluconacetobacter hansenii ATCC 23769]
Length = 421
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V V T ++L ++ L +E F +DTE R++ L+Q+++ E +VD +A +
Sbjct: 34 VLVTTTAELGAVSARLRREPFITIDTEFVRERTYWPELCLVQLASADEVVVVDALAPGMD 93
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L AD GV KVFH + D+ F LFDT A V Q L+
Sbjct: 94 LAPLGELLADEGVIKVFHAARQDLEIFLHLFDRLPQPLFDTQVAAMVAGYGDQVGYDSLV 153
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
+ G +K + DW RPL A ++YA D YL + + LVA+L ++G ++
Sbjct: 154 ASVVGAQIDKSHRFSDWAARPLSAAQIEYAAADVTYLREVYQRLVAQLDREGRKD 208
>gi|398964229|ref|ZP_10680176.1| ribonuclease D [Pseudomonas sp. GM30]
gi|398148804|gb|EJM37472.1| ribonuclease D [Pseudomonas sp. GM30]
Length = 377
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 118/282 (41%), Gaps = 41/282 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+Q+ K YL+D + + D
Sbjct: 7 WIRDNESLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPLTI-DAW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +++A+ V Q G + S D
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSDTQISYAAEDA---VHLAEVFV----QLGPKLS---D 174
Query: 289 DKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
DKF +VLE A+ R T +VY + + + ++L Q V
Sbjct: 175 DKFAWVLEDGAELVANLRRETDPYEVYRE-----------AKLAWKLSRAQLAV------ 217
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R LCAWR+ AR D ++ + ++ LA P N
Sbjct: 218 ----LRELCAWREKEARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|119775068|ref|YP_927808.1| ribonuclease D [Shewanella amazonensis SB2B]
gi|119767568|gb|ABM00139.1| ribonuclease D [Shewanella amazonensis SB2B]
Length = 371
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 118/282 (41%), Gaps = 28/282 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V+ L L + S+ +DTE R++ LIQ+ L+D + + D
Sbjct: 4 FHYVKDDEALTALVDQYSQSRLLVLDTEFVRTRTYYAKLGLIQVYDGNTLALIDPLDIQD 63
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
+S +P + K+ H D+ R + LFD+ A LS L Y
Sbjct: 64 -LSGFWALLTNPNILKLVHSCSEDLEVFARYGKVQPTPLFDSQIAA-ALSGMGHGLGYAK 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E G +K R DW +RPL LQYA D YL + L +LK G
Sbjct: 122 LVEECLGQTLDKGESRTDWIKRPLTDAQLQYAANDVFYLYQLYPQLEQKLKTLG------ 175
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+F++VLE R LQ A++ + ++ N ++
Sbjct: 176 ---RFDWVLEEGARLTEGRLQ-----------RPEAATAYLKVKNA----FQLTPKQLAY 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
++ L AWR A D +L FV+ D A+IALA K P + +D+
Sbjct: 218 LKVLAAWRLERALDRDLALGFVIKDHALIALAKKPPRSISDL 259
>gi|320103484|ref|YP_004179075.1| ribonuclease D [Isosphaera pallida ATCC 43644]
gi|319750766|gb|ADV62526.1| ribonuclease D [Isosphaera pallida ATCC 43644]
Length = 396
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 34/276 (12%)
Query: 118 LNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFF 177
L +LA+ L E F DTE + S+ LIQ++T + ++D +A D L PF+
Sbjct: 16 LRDLADHLRAEGRFGFDTEFVAEESYEPILCLIQVATASKLVVIDALAFSD----LSPFW 71
Query: 178 ---ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT--AKACEVLSKPQKSLAYLLETYC 232
DP + V H D+ + +FD A LS P SL L
Sbjct: 72 DAVLDPKLEVVVHAGGEDLRICKIKTGRLPERVFDVQLAAGFTGLSYPL-SLTNLAREVL 130
Query: 233 GVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFN 292
GV R DWR+RPL + YA D +LL +A L ++L++ G + +
Sbjct: 131 GVQLVGGESRTDWRKRPLSVAQMNYALEDVRHLLDLADALRSKLERMG---------RLD 181
Query: 293 FVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCA 352
+V+E +R + +I A + RL G+ ++ ++ RRL
Sbjct: 182 WVIEETR--------AFLDDISQ---NQDADDRWRRL----PGLHQLNRRGLEIARRLAE 226
Query: 353 WRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
WR A++ ++ LRF++ D ++A+A + P ++ D+
Sbjct: 227 WRMEDAQIQNKPLRFLMKDDLLVAIAKRQPKDKRDL 262
>gi|328698648|ref|XP_001946371.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Acyrthosiphon pisum]
Length = 522
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 505 SPVYHNCRIYANDGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNE 564
+ VY NC + DG ++ C KK++WY+++ LA+LV + P I L F + + +
Sbjct: 266 AKVYDNCLMENVDGTVMSTCSHKKVDWYISQGLAELVNNEPKTIRLNFSADLK--NRKDN 323
Query: 565 FYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAA 624
F + ++NIC CG ++ + IIP + H P K+H HD +LLC CH ++A
Sbjct: 324 FSVLPRENICTVCGRSEYFRKKSIIPKEFVRHMPTVHKTHIPHDTLLLCYWCHIKSNAFD 383
Query: 625 EKYKKQISAEFGIPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGP 684
+K++ I E P I A V ++ ++ A LL
Sbjct: 384 FTIRKKLFNMCQI------------KELNPNEYQKI---PAYVKIMRSKSLAKTLLKSRH 428
Query: 685 TMPSNRREELRRIVMRYYGGR 705
++P ELR + Y +
Sbjct: 429 SLPDKVANELRLEIAETYNMK 449
>gi|220933694|ref|YP_002512593.1| ribonuclease D [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995004|gb|ACL71606.1| ribonuclease D [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 396
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 26/283 (9%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
L+ +D +++T L ++ + A+DTE +++ L+Q++T +D
Sbjct: 8 LRVTDEIRFIDTAEGLAAFCGEIAGAQWIALDTEFVREKTYYPRLCLVQVATPDALACID 67
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQ 221
IAL D + L DP V KV H + D+ L + +FDT A +L Q
Sbjct: 68 PIALPD-LGPLAALLHDPAVTKVVHAAHQDMEILLQSTGRVPTPVFDTQVAVSLLGHGDQ 126
Query: 222 KSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
A +++ Y + +K R DW QRPL L+YA D +L + ++ +L+++G
Sbjct: 127 IGYARMVQIYLDLELDKGHTRTDWSQRPLETAQLRYAADDVRHLARVYPMILKDLEEKGR 186
Query: 282 ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISS 341
+ D F + E SR Y + P A +R + GQ +
Sbjct: 187 LDWLSED--FAAISEESR---------YLPD----PDNA------WRRIKGQ---KYLKG 222
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+++ L AWR+ A D R++LSD + L+ ++P +
Sbjct: 223 AQLAVLQALAAWRERQAMEKDLPKRWILSDDVLTELSQRSPTD 265
>gi|405355820|ref|ZP_11024932.1| Ribonuclease D [Chondromyces apiculatus DSM 436]
gi|397091092|gb|EJJ21919.1| Ribonuclease D [Myxococcus sp. (contaminant ex DSM 436)]
Length = 378
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E S+ +F +Q++T+ E +L+DT+ +L P ADP K FH +
Sbjct: 19 IAVDLEADSMHAFRARLCFLQLATDAEVFLLDTLQPGVVPDMLAPLMADPARTKFFHAAQ 78
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ +L + + V LFDT +A +L P+ LA L GV K Q+ D+ RPL
Sbjct: 79 GDLQFLA-EVGVRVQGLFDTHRAATLLGWPKVGLADLARERLGVELPKEHQQSDFSIRPL 137
Query: 251 PAEMLQYAQTDAHYLLYIAK 270
P M +Y D YL + +
Sbjct: 138 PPGMREYIANDVRYLCELGR 157
>gi|335420266|ref|ZP_08551304.1| ribonuclease D [Salinisphaera shabanensis E1L3A]
gi|334894625|gb|EGM32810.1| ribonuclease D [Salinisphaera shabanensis E1L3A]
Length = 382
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 26/277 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
V + + L E A + + + A+DTE ++ L+QI+ E L+D IAL D
Sbjct: 9 VVTITDDAALAEFAARMRERDWIAIDTEFLRESTYYPELCLVQIADAHEIGLIDVIAL-D 67
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYL 227
++ L D V KVFH ++ D+ L + F LFDT A ++ Q A L
Sbjct: 68 DLEPLAALLTDTSVLKVFHSAEQDLEVLYQRFGTMPAPLFDTQVAAPLVGLDDQMGYARL 127
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ + K R DW +RPLP L YA D Y L +A ++ + ++
Sbjct: 128 IKALLDIELPKAHTRTDWSKRPLPTGALDYAADDVRY-LALAYHVIGNTLVEHEREAWLV 186
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
DD F +++ R V + I+S+ RL Q Q +
Sbjct: 187 DD-FEQMVQPERFD--VDTSAAWRRIKSW----------HRLNPAQ----------QQAL 223
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ WR+ A D R++L+D +I LA + P N
Sbjct: 224 AEIADWREREAMASDRPRRWILADDIVIELAKRRPQN 260
>gi|92113585|ref|YP_573513.1| ribonuclease D [Chromohalobacter salexigens DSM 3043]
gi|91796675|gb|ABE58814.1| ribonuclease D [Chromohalobacter salexigens DSM 3043]
Length = 375
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 141/345 (40%), Gaps = 46/345 (13%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDE 169
WV T L++ +AL+ + AVDTE H +F AL+Q+ + Y+VD A+
Sbjct: 9 WVATPGALDDACDALAGAEWLAVDTEFHRESTFFPIAALVQLYAGGDAVYMVDPRAVSAS 68
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--L 227
+ LQ + G K+ H S D+ L+ + V + DT A +L Q SL Y L
Sbjct: 69 PA-LQALLSVSGPLKLLHASGEDLEVLESWAEVGVAPIADTQVAQSLLGT-QASLGYQRL 126
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+E + G K R DW QRPL LQYA D YL I + L ++G
Sbjct: 127 VEHWTGDVLPKEETRSDWLQRPLSDAQLQYAALDVVYLPRIWEAQRDALMREGRLAWL-- 184
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+++ + +A+RR Y + + + E +++ Q L
Sbjct: 185 EEECARLCDANRRDVNADEHWYRRHRQLWRLEPRQLALY-----------------QSLT 227
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR-----------------TDVYT 390
R WR+ R D ++ SD+ + A+A P NR D
Sbjct: 228 R----WREGEVRRRDVPRGWLASDKVLFAIAMAMPRNRHQLAAVEGVRPTLIKHDGDALL 283
Query: 391 TIAQADSDVDCLNLSSSLPSP-SPVVCSHLDDVERQVCNNVENLD 434
+ QA + + L +LP+P SP S L ++ V E LD
Sbjct: 284 EMVQAAAHLAEDALPRALPAPQSPAFKSRLKALKSVVNREAERLD 328
>gi|257784443|ref|YP_003179660.1| ribonuclease D [Atopobium parvulum DSM 20469]
gi|257472950|gb|ACV51069.1| ribonuclease D [Atopobium parvulum DSM 20469]
Length = 379
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 26/276 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T +L AVDTE +++ L+Q+ST E +D + L D+
Sbjct: 4 LYIATSEELFAFCERAKTSHILAVDTEFLREKTYFPKLCLVQVSTGSEIAAIDPL-LIDD 62
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L+ +P + K+ H D+ L +FDT A L + Q S A L+
Sbjct: 63 LTPLKELLENPEIVKILHACSQDLEVLLEKMDCACAPVFDTQVAAAFLGMRQQVSYAGLV 122
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
E + V K DW +RPL E L YA+ D YL I +V +L + + P+
Sbjct: 123 ENFANVKLAKAESLTDWSKRPLDKEQLVYAEDDVRYLPAIYNQMVEKLIKLDRLSWLKPE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ ++ RR P +A + RL S++ + R
Sbjct: 183 MDQHTNIDQYRRD---------------PYQA-----YLRLKRS----GSLTRRQLAIAR 218
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+CAWR+ +A D ++VLSD+ II + + P
Sbjct: 219 EVCAWREEIAAKRDVPRKWVLSDELIIEICRRVPTT 254
>gi|410611226|ref|ZP_11322325.1| ribonuclease D [Glaciecola psychrophila 170]
gi|410169077|dbj|GAC36214.1| ribonuclease D [Glaciecola psychrophila 170]
Length = 388
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ + +L + + S+ AVDTE R+ LIQI K+ LVD +A+ D+ S
Sbjct: 6 ITSNQELADFCHQASQVEAIAVDTEFVRTRTLYPQLGLIQIYDGKQLVLVDPLAI-DDFS 64
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK-PQKSLAYLLET 230
L +P V KV H D+ F + +FD+ A ++ P A L+E
Sbjct: 65 SLTALLTNPNVVKVLHSCSEDLETFWHAFKVMPSPIFDSQFAASIVGMGPALGYAKLVEI 124
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
V +K R DW RPL E YA D YL + L A + +Q DK
Sbjct: 125 MLEVTVDKGESRTDWLARPLRIEQCDYAAKDVLYLFQLYPELKARVIEQ---------DK 175
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
++V S L V + + S++ + N +SS ++++L
Sbjct: 176 LSWV-----YSEIAHLSVKKQTL------LPLDSVYLTIKNNW----KLSSKAVMILKKL 220
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
AWR AR+ D +L FV+ ++ ++++A P ++ ++
Sbjct: 221 AAWRTSTARLCDMALNFVVREENLLSIAMLQPTSKNEL 258
>gi|406894045|gb|EKD38950.1| hypothetical protein ACD_75C00553G0006 [uncultured bacterium]
Length = 378
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 26/273 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDEI 170
++T+++L+ L + A+DTE R++ LIQI+ ED YL+D +A+ + +
Sbjct: 8 IQTEAELDILVRRAKQTDAVALDTEFVWERTYYPQLGLIQIALSDEDCYLIDPVAVKN-L 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLE 229
L +D GV K+ H + D+ LQR N+FDT A + P SL L++
Sbjct: 67 QALGQLLSDRGVVKILHDAPQDLAILQRATGATPQNIFDTRLAAGFSNLPATLSLGNLVK 126
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ +K R +W QRPL E ++YA D YL + L++ + G + +
Sbjct: 127 ELLDIELSKEETRTNWLQRPLTEEQVRYALDDVRYLRAVRVLLLSRII--GPKIRSWLQE 184
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
N + + +Y G A + R+ N + ++ ++
Sbjct: 185 DLNLLNNPA----------------TYCG-TPADERYLRIRN----IGTLDRPGLAILMN 223
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L WRD MA+ HD ++ D ++ +A K P
Sbjct: 224 LTTWRDGMAKKHDRPRGHIIKDTILLEIARKKP 256
>gi|338532921|ref|YP_004666255.1| putative ribonuclease D [Myxococcus fulvus HW-1]
gi|337259017|gb|AEI65177.1| putative ribonuclease D [Myxococcus fulvus HW-1]
Length = 378
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E S+ +F +Q++T+ E +L+DT+ +L P ADP K FH +
Sbjct: 19 IAVDLEADSMHAFRARLCFLQLATDDEVFLLDTLQPGVVPGMLAPLMADPARTKFFHAAQ 78
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ +L + + V LFDT +A +L P+ LA + GV K Q+ D+ RPL
Sbjct: 79 GDLQFLA-EVGVRVQGLFDTHRAATLLGWPKVGLADIARERLGVELPKEHQQSDFSIRPL 137
Query: 251 PAEMLQYAQTDAHYLLYIAK 270
P M +Y D YL + +
Sbjct: 138 PPGMREYIANDVRYLCELGR 157
>gi|77457615|ref|YP_347120.1| ribonuclease D [Pseudomonas fluorescens Pf0-1]
gi|398979427|ref|ZP_10688437.1| ribonuclease D [Pseudomonas sp. GM25]
gi|77381618|gb|ABA73131.1| putative ribonuclease [Pseudomonas fluorescens Pf0-1]
gi|398135857|gb|EJM24962.1| ribonuclease D [Pseudomonas sp. GM25]
Length = 377
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 135/337 (40%), Gaps = 64/337 (18%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+Q+ K YL+D + I
Sbjct: 7 WIRDNDSLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPLT----I 62
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ QP A +P V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 63 NAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL + YA DA +L + L +L
Sbjct: 122 RLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLS-------- 173
Query: 286 CPDDKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
DDKF +VLE A+ R T +VY + + + ++L Q V
Sbjct: 174 --DDKFAWVLEDGAELVANLRRETDPYEVYRE-----------AKLAWKLSRAQLAV--- 217
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT------DVYTTIA 393
+R LCAWR+ AR D ++ + ++ LA P N + D++
Sbjct: 218 -------LRELCAWREREARARDLPRNRIVREHSLWPLARTQPDNLSALGKIEDMHPRTV 270
Query: 394 QADSD--VDCLNLSSS---------LPSPSPVVCSHL 419
+ D + +D + S S +P P P+ + L
Sbjct: 271 RQDGEFLLDLIKRSGSVGPDQWPPAVPEPLPIEAAAL 307
>gi|210632651|ref|ZP_03297493.1| hypothetical protein COLSTE_01396 [Collinsella stercoris DSM 13279]
gi|210159428|gb|EEA90399.1| ribonuclease D [Collinsella stercoris DSM 13279]
Length = 377
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 32/282 (11%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T L+ A+DTE R++ L+Q++T E ++D + + D+
Sbjct: 1 MYISTYDDLSAFCGRARCHVAIAIDTEFLRERTYHAKLCLVQVATPDECVVIDPLTI-DD 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L AD KVFH D+ L + +FDT A L + Q S L+
Sbjct: 60 LSPLAELMADVDTLKVFHACSQDMEVLVHTLGVCPAPIFDTQVAAGFLGERAQCSYHNLV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
++CGV+ K DW +RPL + ++YA D YL+ + + ++L G ++ D
Sbjct: 120 HSFCGVSLPKTESLTDWSRRPLSPQQIEYAVDDVRYLIDAYRVIESKLHSLGR-TAWVRD 178
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ---D 345
+ A RS+ S F R V I++ T+
Sbjct: 179 EIRPLADPAHYRSD-------------------PRSAFKR-------VKRINACTRRQLA 212
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTD 387
+ R L AWR+ A D ++V+SD+ ++AL + P D
Sbjct: 213 VARELAAWREHRAEDRDIPRKWVMSDEVLVALCRRVPKTIED 254
>gi|212556582|gb|ACJ29036.1| Ribonuclease D [Shewanella piezotolerans WP3]
Length = 369
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 118/284 (41%), Gaps = 28/284 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +++ + L L + +DTE R++ LIQ K L+D +A+
Sbjct: 3 AFQYIDDDTSLAALVAQYREAKLLVIDTEFVRTRTYYARLGLIQAYDGKTLALIDPLAVT 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ +S+ D + K+ H D+ ++ LFD+ A L L Y
Sbjct: 63 N-LSLFWALLTDSSIIKLLHSCSEDLEVFAKNGACQPNKLFDSQIAAG-LCGMGYGLGYA 120
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E + +K R DW +RPL L YA D +YL + LV +L+ QG
Sbjct: 121 KLVEQTLDITLDKGESRTDWLKRPLSEAQLNYAANDVYYLYELYPQLVDKLESQG----- 175
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+ ++V E R L E+ + A F+LL Q V
Sbjct: 176 ----RLDWVYEDGERMTQGRLDAPDPEVAYLKVKNA-----FQLLPRQLAV--------- 217
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ L WR A + D +L FV+ D A+IALA K P N D+Y
Sbjct: 218 -LKALAKWRLKRALIKDLALGFVVKDHALIALAKKMPKNSNDLY 260
>gi|90416003|ref|ZP_01223936.1| ribonuclease D [gamma proteobacterium HTCC2207]
gi|90332377|gb|EAS47574.1| ribonuclease D [gamma proteobacterium HTCC2207]
Length = 374
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 40/316 (12%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W++ QL EL L A+DTE +F ALIQ+S ++ +L+DT A+ +++
Sbjct: 7 WIDNSQQLAELCEQLQDATELAIDTEFMRSDTFFAKLALIQLSDGEQCWLIDTPAI-EQL 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLE 229
L P + VFH D+ L + + LFD+ A +++ A L+E
Sbjct: 66 QPLTALLNGPQLTLVFHSCGEDLEVLDQVLSVRPKKLFDSQVAAGIVNIGYSMGYARLVE 125
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ K R DW RPL +YA D YL I K L+ L+QQ + S+ ++
Sbjct: 126 NMLQIELGKEDTRSDWLARPLSDRQKRYAADDVLYLFRIYKLLLELLEQQQRQ-SWFAEE 184
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
+ A+ R A + R+ G + +++ +++R
Sbjct: 185 MLDLQRVAAERRE-------------------ALDYYLRV----KGAWRLDALSLAVLKR 221
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTT--------------IAQA 395
LC WR+ AR D+ ++ D ++ LAN P + + ++ + Q
Sbjct: 222 LCEWRERAARALDKPRSHIVKDNVLLELANNKPTHMSQLHQIDDWYSRSVKRFGEQVLQE 281
Query: 396 DSDVDCLNLSSSLPSP 411
++VD +L LP P
Sbjct: 282 IANVDHNDLPDELPQP 297
>gi|156100329|ref|XP_001615892.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax
Sal-1]
gi|148804766|gb|EDL46165.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax]
Length = 1114
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
++ GFT+LI + TE+ DY++D + + +++ L DP + K+ + S + + +QRDF
Sbjct: 495 TYRGFTSLILVGTEECDYILDALHIFEQMHALNEVTTDPNILKIVYKSKSIIPVMQRDFS 554
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
IY VN+ D + C + SLA+L+ Y V+ N Q + RPL + +Q +
Sbjct: 555 IYFVNIIDIS-VCSDFLNVRNSLAFLVHNYFHVSVNSAGQGFNALTRPLSTDAVQNLRMP 613
Query: 262 AHYLLYIAKCLVAEL 276
HYL Y+ + + +L
Sbjct: 614 FHYLYYLFEYVKTDL 628
>gi|398925909|ref|ZP_10662148.1| ribonuclease D [Pseudomonas sp. GM48]
gi|398171503|gb|EJM59405.1| ribonuclease D [Pseudomonas sp. GM48]
Length = 377
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L L + F A+DTE + +F L+Q+ + YL+D +++ +
Sbjct: 7 WIRDNDSLGRLCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGERAYLIDPLSIDN-- 64
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
QPF A +P V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 65 --WQPFAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL + YA DA +L + L +L
Sbjct: 122 RLVQEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPKLS-------- 173
Query: 286 CPDDKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
DDK+ +VLE A+ R T +VY + + + ++L Q V
Sbjct: 174 --DDKYAWVLEDGAELVANLRRETDPYEVYRE-----------AKLAWKLSRAQLAV--- 217
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R LCAWR+ AR D ++ + ++ LA P N
Sbjct: 218 -------LRELCAWREKEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|398854783|ref|ZP_10611319.1| ribonuclease D [Pseudomonas sp. GM80]
gi|398234335|gb|EJN20213.1| ribonuclease D [Pseudomonas sp. GM80]
Length = 377
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 115/285 (40%), Gaps = 47/285 (16%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+Q+ K YL+D + I
Sbjct: 7 WIRDNESLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPLT----I 62
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ QP A +P V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 63 NAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL + YA DA +L + L +L
Sbjct: 122 RLVQAVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLS-------- 173
Query: 286 CPDDKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
DDKF +VLE A+ R T +VY + + ++L Q V
Sbjct: 174 --DDKFAWVLEDGAELVANLRRETDPYEVYRD-----------AKLAWKLSRAQLAV--- 217
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R LCAWR+ AR D ++ + ++ LA P N
Sbjct: 218 -------LRELCAWRETEARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|108760811|ref|YP_634116.1| ribonuclease D [Myxococcus xanthus DK 1622]
gi|108464691|gb|ABF89876.1| putative ribonuclease D [Myxococcus xanthus DK 1622]
Length = 389
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E S+ +F +Q++T+ + +L+DT+ +L P ADP K FH +
Sbjct: 30 IAVDLEADSMHAFRARLCFLQLATDDQVFLLDTLQPGVVPGMLAPLMADPARTKFFHAAQ 89
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ +L + + V LFDT +A +L P+ LA L GV K Q+ D+ RPL
Sbjct: 90 GDLQFLA-EVGVRVQGLFDTHRAATLLGWPKVGLADLARERLGVELPKEHQQSDFSIRPL 148
Query: 251 PAEMLQYAQTDAHYLLYIAK 270
P M +Y D YL + +
Sbjct: 149 PPGMREYIANDVRYLCELGR 168
>gi|372269240|ref|ZP_09505288.1| ribonuclease D [Alteromonas sp. S89]
Length = 386
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 30/276 (10%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+W+++ QL EL + A+DTE R+F AL+Q+ K YL+D +A+ D
Sbjct: 23 IWIDSDEQLAELCARWRTQSAIALDTEFMRSRTFYPQPALVQVGDGKHCYLIDNLAI-DN 81
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--L 227
+ L+ D V K+ H D+ L+R + +FDT A + S L Y
Sbjct: 82 LVPLKELLQDTRVVKIMHSCSEDLETLERLLGVIPDPIFDTQIAAAI-SGMGAGLGYAAT 140
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ + K R DW QRPL YA D +L + LV L++Q
Sbjct: 141 VSQLLQIDLPKSETRSDWLQRPLSDSQKNYAALDVVWLPLVYGILVKRLREQ-------- 192
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSIS-SVTQDL 346
D+ +++ E C + + P ++++R + G + +V QD
Sbjct: 193 -DRLDWLWED-------CTAMVAAARQPEP-----PALYYRKVKGAWRLRQNQLAVLQD- 238
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
LCAWR+ AR D ++ + +ALA P
Sbjct: 239 ---LCAWREREARARDMPRNHLIKENVCMALAQHMP 271
>gi|387126864|ref|YP_006295469.1| ribonuclease D [Methylophaga sp. JAM1]
gi|386273926|gb|AFI83824.1| Ribonuclease D [Methylophaga sp. JAM1]
Length = 382
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+ +++++ + L + + + + A+DTE +++ LIQI+ + VD IA+
Sbjct: 2 TVLYIDSDTALTQFCSEIQHSKWLAIDTEFLREKTYYPQLCLIQIANDDIIACVDPIAIK 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK-PQKSLAY 226
D +L + P + VFH + D+ L + NLFDT A +L Q
Sbjct: 62 DLTPLLNLLY-QPDITLVFHAARQDLELLYLLKNSLPPNLFDTQLAATILGDGDQIGYGN 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L++ V+ +K R DW QRPL E L+YA D YL + + A+L++Q
Sbjct: 121 LVKQRLDVSLDKAHSRADWTQRPLSPEQLEYAADDVRYLCELYHQMSADLEKQ------- 173
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
T L+ + + A +R + G G + + +
Sbjct: 174 --------------QRTEWLKEDFAALSNADNYVADPETIWRKIRGAGKLKGVQLA---V 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+++L AWR+ A D R++L D+ ++ LA AP
Sbjct: 217 LQQLAAWREQRAMDRDRPRRWILKDEVMLDLARFAP 252
>gi|410632890|ref|ZP_11343540.1| ribonuclease D [Glaciecola arctica BSs20135]
gi|410147563|dbj|GAC20407.1| ribonuclease D [Glaciecola arctica BSs20135]
Length = 388
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 28/260 (10%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVDTE R+ LIQI K+ LVD + + D+ S L+ +P V KV H
Sbjct: 25 IAVDTEFVRTRTLYPQLGLIQIYDGKQLVLVDPLVI-DDFSSLKELLTNPNVVKVLHSCS 83
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQR 248
D+ F I +FD+ A V+ +L Y L+E + +K R DW R
Sbjct: 84 EDLETFWHAFKIMPSPIFDSQFAASVVGM-GTALGYAKLVEIMLEITVDKGESRTDWLAR 142
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PL E YA D YL L ELK + E + P A+++ + L
Sbjct: 143 PLRDEQCDYAAKDVLYLFQ----LYPELKARVEEQNKLPWVYAEIAHLATKKQTPIPL-- 196
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
S++ + N +SS ++++L AWR AR D +L FV
Sbjct: 197 --------------DSMYLTIKNNW----KLSSKALLILKKLAAWRTSTARQRDMALNFV 238
Query: 369 LSDQAIIALANKAPANRTDV 388
+ ++ ++++A P N+ ++
Sbjct: 239 VREENLVSIAMMQPLNKNEL 258
>gi|348029631|ref|YP_004872317.1| ribonuclease D [Glaciecola nitratireducens FR1064]
gi|347946974|gb|AEP30324.1| ribonuclease D [Glaciecola nitratireducens FR1064]
Length = 388
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +++T L++ +S A+DTE R+ + LIQ+ + L+D +AL
Sbjct: 2 NFEYIDTPEALSDFCERISAADALAIDTEFVRTRTLVPQLGLIQVYDGEHLGLIDPVAL- 60
Query: 168 DEISILQPFFADPGVCKVFHG--SDNDVMWLQRDFHIYVVN--LFDTAKACEVLSKPQKS 223
D++S +P + KV H D D +W F++ V+ LFD+ A +L Q +
Sbjct: 61 DDLSPFSDILVNPSIIKVLHSCSEDLDALW----FNLKVIPSPLFDSQFAANLLDMGQ-T 115
Query: 224 LAY--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
L Y L+E + +K R DW RPL E L YA D +LL + + + ++++ G
Sbjct: 116 LGYANLVEKILDIHVDKGESRTDWIARPLSPEQLVYAAADVFHLLPVYRQIAEQVEELGQ 175
Query: 282 ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISS 341
+ +F L +R+ E + + N I +
Sbjct: 176 TEWVFAESEF---LSLKKRA-----------------EIPVDLTYLSIKNNW----KIGA 211
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ ++ + +WR A+ D ++ FVL +Q ++ +A K P N+ ++
Sbjct: 212 QSRQALKEIASWRLQQAQKRDMAINFVLREQGMLEVAMKLPENKAKLF 259
>gi|387592700|gb|EIJ87724.1| hypothetical protein NEQG_02271 [Nematocida parisii ERTm3]
gi|387595329|gb|EIJ92954.1| hypothetical protein NEPG_02353 [Nematocida parisii ERTm1]
Length = 471
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 46/297 (15%)
Query: 99 VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
+D+ + S + +++T + + +E VD + H RS+ GFT IQ++T +
Sbjct: 178 IDVTTEISPNIYYIKTAEECKMANTHILQEAAVGVDIKTHKFRSYSGFTCYIQVATLESI 237
Query: 159 YLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYV---VNLFDTAKACE 215
YL D I L + +L F+++P V KVF+ + V WL++D V V+L E
Sbjct: 238 YLFDMIELRNNSELL-TFWSNPSVVKVFYKATEKVYWLKKDLQYTVKAYVDLLSIYGYPE 296
Query: 216 VLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAE 275
++ +++ Y G K LQ DWR +P+ EM YLL VA
Sbjct: 297 EVTNLGRAVMYA----TGRKLRKQLQLMDWRYKPISVEMCTDLTEQVGYLL----LSVAG 348
Query: 276 LKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIES--YPGEAAASSIFFRLLNGQ 333
+ ++ E + +N+ K+IES P E LL+
Sbjct: 349 MAKKCTEEQFVSG--YNY---------------KAKKIESDLSPEEF--------LLSKN 383
Query: 334 GGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYT 390
+ IS +L RD +A+ DES +F+++D+ ++ + P + V++
Sbjct: 384 IEPAEISV-------KLHMLRDFIAKQEDESPQFLMTDKQLVRFIKEQPTTQEQVFS 433
>gi|389602482|ref|XP_001567294.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505469|emb|CAM42724.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 913
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTR-DLAKLVEDNPPA----------------- 547
P Y N ++ D +L+ D+ K WY+ + LA++V+ PA
Sbjct: 390 PYYDNINVFDPDMQLVFTVDKSKANWYVKKKGLARVVQWRTPAGAIVTEEEKGAFSDAEH 449
Query: 548 -----IMLLFEPK-GRPED----EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHF 597
I L F P R D +++ Q K NICV CG G +R+ ++P YR F
Sbjct: 450 LKVSAIQLSFAPDLARYNDVHIRRNMDYFKQQKDNICVVCGSGGSLVRFAVVPLMYRRFF 509
Query: 598 PEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPL 639
P SH S+D++LLC C + ++ ++ ++ +FGIPL
Sbjct: 510 PRVYMSHNSYDLLLLCPPCFAKSRLLYDRLRQNVADDFGIPL 551
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 867 HGKQVVDYLLREY---------GEDGIRQFCQRWRQVFVEALHPHFLPAGW 908
H VV LL +Y G+ + QF RWR FVE +HP LP GW
Sbjct: 855 HAFLVVRLLLEKYSDSSLYAKTGDHAVGQFIFRWRSSFVEGMHPQHLPCGW 905
>gi|418294438|ref|ZP_12906333.1| ribonuclease D [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065816|gb|EHY78559.1| ribonuclease D [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 374
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV L L + + AVDTE + +F L+Q+ + YL+D +++ D
Sbjct: 7 WVLDDEHLTRLCAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLSVRD-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S DP V KV H D+ L R + LFDT A L+ S+ Y L+
Sbjct: 66 SAFAGVLQDPAVVKVLHACSEDLEVLLRLTGSLPLPLFDTQLAAGYLNI-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL +QYA DA +L + + L+ +L ++ ++ D
Sbjct: 125 QAVLGIELPKGETRSDWLQRPLSEMQVQYAAEDAQHLAELYEALLPKLSD--DKRAWVLD 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA +RL Q V +
Sbjct: 183 DGAELVANLQR--------------ESDPDEAYRDVKQAWRLKPQQLAVLKV-------- 220
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L AWR+ AR+ ++ VL + ++ LA P +
Sbjct: 221 --LTAWRERQARIRNQPRNRVLREASLWPLARTQPRD 255
>gi|89094008|ref|ZP_01166952.1| ribonuclease D [Neptuniibacter caesariensis]
gi|89081682|gb|EAR60910.1| ribonuclease D [Oceanospirillum sp. MED92]
Length = 397
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 43/289 (14%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+W+ + QL+E A+DTE + +F LIQ++ ++ YL+D + + D
Sbjct: 20 IWITSAEQLSECCEKWRNLPLIALDTEFQRVDTFYPLPGLIQVADDQACYLIDPLEISD- 78
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLL 228
S L F D GV KV H + D+ ++ V LFDT A +++ L +L
Sbjct: 79 FSSLSTLFKDEGVVKVMHAATEDLELFHKEIGALPVPLFDTQIAAALINWGFSMGLQRML 138
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
E+ V K +W QRPL + +YA D YL I + EL +G+
Sbjct: 139 ESCLSVQLEKHETTSNWLQRPLTSSQEKYAALDVAYLPAIYEIQRQELLSRGH------- 191
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ---- 344
F++V +E + +AA + G S + TQ
Sbjct: 192 --FHWV---------------EQECSAMLADAAIDDV--------DGFSYYTRFTQMWRL 226
Query: 345 -----DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+R L AWR+ AR + +L +QAI+ + + P D+
Sbjct: 227 PKHKLAALRDLTAWREQQARKRNVPRNRILRNQAILQIIEQWPKGLADL 275
>gi|195328901|ref|XP_002031150.1| GM25821 [Drosophila sechellia]
gi|194120093|gb|EDW42136.1| GM25821 [Drosophila sechellia]
Length = 532
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 17/176 (9%)
Query: 207 LFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLL 266
+FDT +A + L+ + SLAYLL+ Y + +K LQ DWR RPLP +++ YA+ D H+L+
Sbjct: 1 MFDTHRAAKALNMARLSLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLI 60
Query: 267 YIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIF 326
Y+ + + +L QQ E + ++S VC + Y K P S +
Sbjct: 61 YVYERMTNDLLQQQAEP--------GLLGSVYQQSTDVCKKRYNK-----PHIGPESHLD 107
Query: 327 FRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ S + +R + WRD AR DES +VL + ++ +A P
Sbjct: 108 L----VRKTKRSFDNRQLYALRGIFEWRDATARSEDESYGYVLPNHMMLQIAESLP 159
>gi|149919604|ref|ZP_01908083.1| ribonuclease D, putative [Plesiocystis pacifica SIR-1]
gi|149819547|gb|EDM78975.1| ribonuclease D, putative [Plesiocystis pacifica SIR-1]
Length = 386
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 8/174 (4%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE- 169
WV T ++L LA + + A+D+E +S+ ++ L+Q++ +LVDT+AL +
Sbjct: 9 WVRTDAELTALAQRMRDAAWVALDSESNSMFAYRERVCLLQLNVAGALFLVDTLALAGDS 68
Query: 170 -------ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
++ L A P + HG + DV L+RDF I + LFDT +A L +
Sbjct: 69 GEPRAEALAALAEPLASPSLRLWIHGGEYDVACLKRDFGIALGGLFDTQQAASFLGWSRT 128
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
A ++E C K ++ DW +RP+ A+ L+YA D +L + + L A +
Sbjct: 129 GYAAVVEAVCEQKLPKAHKQHDWGRRPIDAKALRYALDDVVHLPRVGRELEARI 182
>gi|152985900|ref|YP_001349451.1| ribonuclease D [Pseudomonas aeruginosa PA7]
gi|150961058|gb|ABR83083.1| ribonuclease D [Pseudomonas aeruginosa PA7]
Length = 393
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ + ++L+D + + D
Sbjct: 27 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRREWLIDPLLVRDWG 86
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
+ DP V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 87 PFAE-LLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 144
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 145 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 202
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 203 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 238
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 239 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 279
>gi|398020401|ref|XP_003863364.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501596|emb|CBZ36676.1| hypothetical protein, conserved [Leishmania donovani]
Length = 891
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 29/164 (17%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTR-DLAKLVEDNPPA----------------- 547
P Y N ++ D +L+ D+ K +WY+ + LA++V+ PA
Sbjct: 370 PYYDNISVFDPDMQLVFTVDKTKADWYVNKKGLARVVQWRTPAGAIVREEEKATLSDSVD 429
Query: 548 ------IMLLFEPK-GRPED----EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIH 596
I L F P R D +++ Q K+NICV CG G +R+ ++P YR
Sbjct: 430 NLVVTAIQLSFVPDFSRYNDVHIRRNMDYFKQPKENICVVCGSGGMLVRFAVVPLMYRRF 489
Query: 597 FPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLF 640
FP SH S+D++LLC C + ++ ++ ++ +FGIPL
Sbjct: 490 FPSVYMSHNSYDLLLLCPHCFAKSRRLYDRLRQNVADDFGIPLM 533
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 837 DECENSSVQNGFGSSSP---TPNSKVSLLGH-GPHGKQVVDYLLREY---------GEDG 883
DE S+ SS P T +S+VS + + H VV LL +Y GE
Sbjct: 799 DETRESNGGPAQRSSPPADMTADSEVSEVPYVDSHAFLVVRLLLEKYSDASSGAKTGEHA 858
Query: 884 IRQFCQRWRQVFVEALHPHFLPAGW 908
+ QF RWR FVE +HP LP GW
Sbjct: 859 VGQFIFRWRSSFVEGMHPQHLPRGW 883
>gi|398989100|ref|ZP_10692585.1| ribonuclease D [Pseudomonas sp. GM24]
gi|399012536|ref|ZP_10714856.1| ribonuclease D [Pseudomonas sp. GM16]
gi|398115369|gb|EJM05153.1| ribonuclease D [Pseudomonas sp. GM16]
gi|398148360|gb|EJM37041.1| ribonuclease D [Pseudomonas sp. GM24]
Length = 377
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 116/285 (40%), Gaps = 47/285 (16%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+Q+ K YL+D + I
Sbjct: 7 WIRDNESLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPLT----I 62
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ QP A +P V KV H D+ L R +FDT A L+ S+ Y
Sbjct: 63 NAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPMFDTQLAAAYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL + YA DA +L + L +L
Sbjct: 122 RLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLS-------- 173
Query: 286 CPDDKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
DDKF +VLE A+ R T +VY + + + ++L Q V
Sbjct: 174 --DDKFAWVLEDGAELVANLRRETDPYEVYRE-----------AKLAWKLSRAQLAV--- 217
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R LCAWR+ AR D ++ + ++ LA P N
Sbjct: 218 -------LRELCAWRETEARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|374619794|ref|ZP_09692328.1| ribonuclease D [gamma proteobacterium HIMB55]
gi|374303021|gb|EHQ57205.1| ribonuclease D [gamma proteobacterium HIMB55]
Length = 366
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 34/279 (12%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
SF + ++ +LNE+ E F AVDTE +F AL+Q+ + YL+D
Sbjct: 2 SFELITSERRLNEVLAEHEGEQFVAVDTEFRRRDTFYPQVALVQLCWRETAYLIDPTRF- 60
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
E S L+ + V K+ H D+ + LFDT +A +L + Y
Sbjct: 61 SEFSALRELLVNEAVIKLLHSPSEDLEVFDHWLGVLPTPLFDTQRAMALLGH-GFGIGYR 119
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
++ + GV +K DW +RPL A+ L YA D YL I
Sbjct: 120 PMVAQFVGVEISKEETTSDWLKRPLSAQQLNYAALDVTYLRSIG---------------- 163
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+K + E + R +Y PG +S F +S+ Q
Sbjct: 164 ---EKLHVQAEKACR----LAWIYEDTANQKPGGKGVASKF-------KSAWKLSTGEQG 209
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L+ L AWR+ + D ++L D+ ++ALA +APA+
Sbjct: 210 LLSALIAWREDESHRLDRPRSWILPDKVMVALARRAPAH 248
>gi|146095489|ref|XP_001467593.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134071958|emb|CAM70655.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 891
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 29/164 (17%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTR-DLAKLVEDNPPA----------------- 547
P Y N ++ D +L+ D+ K +WY+ + LA++V+ PA
Sbjct: 370 PYYDNISVFDPDMQLVFTVDKTKADWYVNKKGLARVVQWRTPAGAIVREEEKATLSDAVD 429
Query: 548 ------IMLLFEPK-GRPED----EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIH 596
I L F P R D +++ Q K+NICV CG G +R+ ++P YR
Sbjct: 430 NLVVTAIQLSFVPDFSRYNDVHIRRNMDYFKQPKENICVVCGSGGMLVRFAVVPLMYRRF 489
Query: 597 FPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLF 640
FP SH S+D++LLC C + ++ ++ ++ +FGIPL
Sbjct: 490 FPSVYMSHNSYDLLLLCPHCFAKSRRLYDRLRQNVADDFGIPLM 533
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 837 DECENSSVQNGFGSSSP---TPNSKVSLLGH-GPHGKQVVDYLLREY---------GEDG 883
DE S+ SS P T +S+VS + + H VV LL +Y GE
Sbjct: 799 DETRESNGGPAQRSSPPADMTADSEVSEVPYVDSHAFLVVRLLLEKYSDASSGAKTGEHA 858
Query: 884 IRQFCQRWRQVFVEALHPHFLPAGW 908
+ QF RWR FVE +HP LP GW
Sbjct: 859 VGQFIFRWRSSFVEGMHPQHLPRGW 883
>gi|308509326|ref|XP_003116846.1| CRE-CRN-3 protein [Caenorhabditis remanei]
gi|308241760|gb|EFO85712.1| CRE-CRN-3 protein [Caenorhabditis remanei]
Length = 488
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 217 LSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
L P+ SLAYL + V +K Q DWR RPL M+ YA+ D HYLLY L +L
Sbjct: 4 LKYPKFSLAYLAFRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQL 63
Query: 277 KQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGV 336
+Q ++ N V N +C++VY K + G + F
Sbjct: 64 LKQDKKD-------LNVVYS---ECNDLCVRVYKKPVFKPKGYLTDLKLRF--------- 104
Query: 337 SSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
+ +S + L WRD++AR DES +FVL + ++ALA + P + +Y
Sbjct: 105 -TFNSRQDHALTSLYKWRDVVARQEDESPQFVLPNHMLLALAEQLPRDVGGIY 156
>gi|342179232|sp|A6V8R6.2|RND_PSEA7 RecName: Full=Ribonuclease D; Short=RNase D
Length = 376
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ + ++L+D + + D
Sbjct: 10 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRREWLIDPLLVRDWG 69
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
+ DP V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 70 PFAE-LLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 127
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 128 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 185
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 186 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 221
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 222 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 262
>gi|70728873|ref|YP_258622.1| ribonuclease D [Pseudomonas protegens Pf-5]
gi|68343172|gb|AAY90778.1| ribonuclease D [Pseudomonas protegens Pf-5]
Length = 377
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 116/276 (42%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L +L + F A+DTE + +F AL+QI + YL+D + + D
Sbjct: 7 WIRDNDSLGQLCAQWQQLPFVALDTEFMRVDTFYPIAALLQIGDGQRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + EL+ + +E
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAQV----FTELRPRLSE------ 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYRWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR + ++ + A+ LA P N
Sbjct: 220 ELCAWREREARARNLPRNRIVREHALWPLAKTQPDN 255
>gi|410666113|ref|YP_006918484.1| ribonuclease D [Simiduia agarivorans SA1 = DSM 21679]
gi|409028470|gb|AFV00755.1| ribonuclease D [Simiduia agarivorans SA1 = DSM 21679]
Length = 383
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+WV+T+++L +L S++ A+DTE +++ LIQ+ K YL+D +A+ D
Sbjct: 9 IWVDTEAELAQLCARWSQQAAIAIDTEFMRSQTYYPHAGLIQVGDGKGCYLIDPLAIKD- 67
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--L 227
+S L +P V KV H D+ + + LFDT A + S+ Y L
Sbjct: 68 LSALAQLLVNPSVIKVIHSCSEDLETFRFLLGVVPKPLFDTQVAA-AFANIGFSMGYANL 126
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
++ G+ +K R DW QRPL + YA D YLL + ++ LK
Sbjct: 127 VKDQLGIELDKGETRSDWMQRPLSQSQMHYAALDVAYLLVVYGKILIRLK 176
>gi|347755007|ref|YP_004862571.1| ribonuclease D [Candidatus Chloracidobacterium thermophilum B]
gi|347587525|gb|AEP12055.1| ribonuclease D [Candidatus Chloracidobacterium thermophilum B]
Length = 405
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 27/278 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+W++T E + + A+D E + L+Q+ VD ++
Sbjct: 1 MWIDTDRAFQEFCHQAYTQTELAIDLEFQGEGRYTPLLCLVQLGLRDRCVAVDPFRVN-- 58
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS-LAYLL 228
++ L P PG+ K+ H D++ L+R+ V++FDT A L + + A L
Sbjct: 59 LTPLAPLLTHPGIRKIVHAGGQDIVLLRRETDAIPVSVFDTQIAAAFLGYGEATGYAALA 118
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + V+ +K Q DW +RPL E ++YA D YL + L+ +L Q G
Sbjct: 119 QRFAKVSLSKKQQFTDWTRRPLLPEQIEYALNDVRYLFPVYDGLLEQLAQHG-------- 170
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ ++VL+A ++ V V +E + ++ G + S+S ++R
Sbjct: 171 -RTDWVLDAC--ADAVAQAVRVRE---------TGQEYLKI----GKLGSMSRRELAVLR 214
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT 386
L WR+ AR + + +L D + +A P T
Sbjct: 215 ELYQWREATARSRNRPVGTILHDDVLRQIAYTLPRTET 252
>gi|294141241|ref|YP_003557219.1| ribonuclease D [Shewanella violacea DSS12]
gi|293327710|dbj|BAJ02441.1| ribonuclease D [Shewanella violacea DSS12]
Length = 369
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F ++E + L L + + +DTE R++ LIQ K L+D +A++
Sbjct: 3 AFEYIEDDASLTALVSQYRQSDLLVLDTEFVRTRTYYANLGLIQAYDGKTLALIDPVAIN 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ +S +PG+ V H D+ R+ NLFD+ A L L Y
Sbjct: 63 N-LSEFWSLLTEPGITTVLHSCSEDLEVFARNGACQPYNLFDSQIAA-ALCGFGHGLGYA 120
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E ++ +K R DW +RPL L YA D +YL + L+ +L++QG
Sbjct: 121 KLVEQTLDISLDKGESRTDWMKRPLSEAQLNYAANDVYYLYNLYPQLLEKLQEQG----- 175
Query: 286 CPDDKFNFVLEASRRSNTVCL------QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI 339
+ ++ E R + L Q Y K ++ +
Sbjct: 176 ----RLAWLFEEGERMTSGRLTPPDLEQAYLKVKNAF---------------------QL 210
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
S ++ L WR A + ++ FV+ D A+I LA K P N D+Y I
Sbjct: 211 SPKQLAYLKVLARWRLNKAITRNLAVGFVVKDHALIGLAKKQPQNSQDLYKMI 263
>gi|226329911|ref|ZP_03805429.1| hypothetical protein PROPEN_03824 [Proteus penneri ATCC 35198]
gi|225200706|gb|EEG83060.1| ribonuclease D [Proteus penneri ATCC 35198]
Length = 372
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 26/278 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + L+ A S+ A+DTE +R++ LIQ+ K+ L+D +A+ D
Sbjct: 6 ITTDTALDTACKAASEASQIALDTEFVRIRTYYPHLGLIQMYDGKQISLIDPLAIKDWTP 65
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLET 230
++ + G+ K H D+ F + DT L P A L+E
Sbjct: 66 FVE-LLTNQGIMKFLHAGSEDLEVFSHQFGCVPTPMIDTQVVAAFLGHPISCGFATLVEK 124
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
Y VA +K R DW RPL + QYA D YLL +A+ L+ E ++ G ++ D+
Sbjct: 125 YENVALDKSESRTDWLARPLTEKQCQYASGDVFYLLPLAEKLIKEAEEAGYMDAIA--DE 182
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
+ A RR TV ++ ++I + L GQ ++ L
Sbjct: 183 CEMI--AERRQETVVPELAYRDISNAWQ-----------LKGQQLAC---------LQML 220
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
WR A+ D +L FV+ ++ + ++A P++ ++
Sbjct: 221 AQWRLNQAKSRDMALNFVVREEHLWSVARYLPSSLAEL 258
>gi|330808098|ref|YP_004352560.1| ribonuclease D [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695883|ref|ZP_17670373.1| ribonuclease D [Pseudomonas fluorescens Q8r1-96]
gi|327376206|gb|AEA67556.1| ribonuclease D [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388009164|gb|EIK70415.1| ribonuclease D [Pseudomonas fluorescens Q8r1-96]
Length = 377
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 112/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI K YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVLLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 EKYRWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|170726464|ref|YP_001760490.1| ribonuclease D [Shewanella woodyi ATCC 51908]
gi|169811811|gb|ACA86395.1| ribonuclease D [Shewanella woodyi ATCC 51908]
Length = 369
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 28/287 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +++ + L +L + + +DTE R+F LIQ K L+D +A+
Sbjct: 3 AFQYIDDDASLAKLVSQYRESQLLVLDTEFVRTRTFYARLGLIQAYDGKTLALIDPVAVS 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
D +S +P + + H D+ R+ V LFD+ A L L Y
Sbjct: 63 D-LSGFWSLLTEPSITTILHSCSEDLEVFARNGQCQPVKLFDSQIAA-ALCGFGHGLGYA 120
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E + +K R DW +RPL L YA D +YL + LV +L++Q
Sbjct: 121 KLVEQTLNIPLDKGESRTDWMKRPLSEAQLNYAANDVYYLYQLYPQLVEKLEEQ------ 174
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
++ +V E R L E+ + R+ N +S
Sbjct: 175 ---NRLGWVFEEGERMTQGRLSPPDLELA-----------YLRVKNA----FQLSPKQLA 216
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
++ L WR A D ++ FV+ D +I LA K P N +++Y I
Sbjct: 217 YLKVLAKWRLSKALSRDLAVGFVVKDHGLIGLAKKQPKNSSELYKMI 263
>gi|440793720|gb|ELR14896.1| 3'5' exonuclease domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 317
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 28/265 (10%)
Query: 125 LSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH--DEISI--LQPFFADP 180
++K + A+DTE + L + LIQ++ E + DT+AL D +++ L+P+ D
Sbjct: 21 VAKAQWLAIDTESNILFVYQPRVCLIQMNVEGVLLVFDTMALMQADPLALEPLRPYLEDG 80
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFL 240
HG+ NDV +RDF I + LFDT +A ++ + ++E+ V+ +K
Sbjct: 81 QRLIFAHGAANDVSTFKRDFDISLNGLFDTQRAAQLAGLAHTNYGAVVESLLSVSLSKDY 140
Query: 241 QREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEA-SR 299
+W RP+ E L+YA D YL + L A +++ G E ++ + + R
Sbjct: 141 THYNWGLRPIELEPLRYALEDVVYLPQVGHMLRARVQELGVEEELAAVNRMLMAMPSHPR 200
Query: 300 RSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMAR 359
R + + L++ G ++ V ++ L WRD AR
Sbjct: 201 RLDDLA-----------------------LVHSIRGTGNLDPVQLGVMGALFLWRDAKAR 237
Query: 360 VHDESLRFVLSDQAIIALANKAPAN 384
D V+S++ ++ +A N
Sbjct: 238 EFDRPCGSVISNERLVKIARALDPN 262
>gi|430761955|ref|YP_007217812.1| Ribonuclease D [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011579|gb|AGA34331.1| Ribonuclease D [Thioalkalivibrio nitratireducens DSM 14787]
Length = 382
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 26/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T++ L L +A++ + A+DTE +++ LIQ++T VD +AL I
Sbjct: 7 ITTETGLRALLDAIAGSEWVAMDTEFIREKTYFPKLCLIQLATPDHIACVDPLALGG-IG 65
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L D V KVFH + D+ L +FDT A +L Q A L+E
Sbjct: 66 QLDQLLQDSAVLKVFHAASQDLEVLYLVTGKVASPVFDTQVAASLLGHGEQVGYANLVEA 125
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+K R DW +RPL L+YA+ D +L + L EL G + P+
Sbjct: 126 VLHRELDKTQSRTDWARRPLQPAQLEYARDDVRFLTELFVQLQKELDALGRLDWLQPE-- 183
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
++ T+ + P A A + R+ G + ++R L
Sbjct: 184 ---------------MEALTRPEQYRPDPARA---WLRV----SGHKRLKPRDLAVLREL 221
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
AWR+ AR D R+V+SD A++ +A PA+
Sbjct: 222 AAWRETEARDLDRPRRWVISDDALLTIARTRPAD 255
>gi|157873497|ref|XP_001685257.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68128328|emb|CAJ08493.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 891
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 29/164 (17%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTR-DLAKLVEDNPPA----------------- 547
P Y N ++ + +L+ D+ K +WY+ + LA++V+ PA
Sbjct: 370 PYYDNISVFDPNMQLVFTVDKTKADWYVNKKGLARVVQWRTPAGAIVREEEKATLSGAVD 429
Query: 548 ------IMLLFEPK-GRPED----EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIH 596
I L F P R D +++ Q K+NICV CG G +R+ ++P YR
Sbjct: 430 NLEVTAIQLSFAPNFSRYNDVHIRRNMDYFKQPKENICVVCGSGGSLVRFAVVPLMYRRF 489
Query: 597 FPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLF 640
FP SH S+D++LLC C + ++ ++ ++ +FGIPL
Sbjct: 490 FPSVYMSHNSYDLLLLCSHCFAKSRRLHDRLRQNVADDFGIPLM 533
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 867 HGKQVVDYLLREY---------GEDGIRQFCQRWRQVFVEALHPHFLPAGW 908
H VV LL +Y G+ + QF RWR FVE +HP LP GW
Sbjct: 833 HAFLVVRLLLEKYSDASSGAKTGDHAVGQFIFRWRSSFVEGMHPQHLPRGW 883
>gi|424921925|ref|ZP_18345286.1| ribonuclease D [Pseudomonas fluorescens R124]
gi|404303085|gb|EJZ57047.1| ribonuclease D [Pseudomonas fluorescens R124]
Length = 377
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 132/334 (39%), Gaps = 58/334 (17%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+Q+ K YL+D + + D
Sbjct: 7 WIRDNESLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPLTI-DAW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAVLLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSDTQVSYAAEDAVHLAEVFVQLRPKLS----------D 174
Query: 289 DKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
DKF +VLE A+ R T +VY + + + ++L Q V
Sbjct: 175 DKFAWVLEDGAELVANLRRETDPYEVYRE-----------AKLAWKLSRAQLAV------ 217
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT------DVYTTIAQAD 396
+R LCAWR+ AR + ++ + ++ LA P N D++ + D
Sbjct: 218 ----LRELCAWREREARARNLPRNRIVREHSLWPLARTQPDNLAALGKIEDMHPRTVRQD 273
Query: 397 SD--VDCLNLSSS---------LPSPSPVVCSHL 419
+ +D + S S +P P PV + L
Sbjct: 274 GEFLLDLIKRSGSVGPDQWPPAVPEPLPVEAAAL 307
>gi|374623203|ref|ZP_09695717.1| ribonuclease D [Ectothiorhodospira sp. PHS-1]
gi|373942318|gb|EHQ52863.1| ribonuclease D [Ectothiorhodospira sp. PHS-1]
Length = 381
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 28/284 (9%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
D +++T L L L + A+DTE +++ LIQ++T +D +AL
Sbjct: 2 DHARFIDTPEALEALCRDLESCAWLALDTEFIREKTYYPQLCLIQVATPDLVACIDPLAL 61
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDV-MWLQRDFHIYVVNLFDTAKACEVLS-KPQKSL 224
D ++ L P + KV H + D+ ++ RD + +FDT A +L Q
Sbjct: 62 ED-LAPLDRLLRRPDLLKVLHAAGQDLEIFYHRDGTV-PAPIFDTQVAASLLGHGDQIGY 119
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
L++ GV K R DW +RPL E L YA D YL + L++ G
Sbjct: 120 GKLIQAVLGVELEKGHSRTDWARRPLDPEQLTYAADDVRYLAQAYPLIRDALERSG---- 175
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
+ ++ E RR + G A +R L G++++ +
Sbjct: 176 -----RLTWLEEDFRR------------LADPTGYEPAPDAMWRRLK---GINTLRGIQL 215
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ R L WR+ A D R++L D+ I+ LA + P+ D+
Sbjct: 216 AIARELARWREQEAMRADRPRRWLLQDEVILDLARRKPSTPADL 259
>gi|378949376|ref|YP_005206864.1| ribonuclease D [Pseudomonas fluorescens F113]
gi|359759390|gb|AEV61469.1| Ribonuclease D [Pseudomonas fluorescens F113]
Length = 377
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 112/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI K YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVLLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 EKYRWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREHEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|146306804|ref|YP_001187269.1| ribonuclease D [Pseudomonas mendocina ymp]
gi|145575005|gb|ABP84537.1| ribonuclease D [Pseudomonas mendocina ymp]
Length = 377
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 114/281 (40%), Gaps = 29/281 (10%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
++ W+ + L E A F A+DTE + +F L+Q+S + YL+D +
Sbjct: 2 ANDIYWIRDNASLAEHCAAWRALPFVALDTEFMRVDTFYPIAGLLQVSGGDKAYLIDPLC 61
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
+ D+ L V KV H D+ R V LFDT A L+ S+
Sbjct: 62 I-DDWRPLAELLQAQTVVKVLHSCSEDLEVFLRLTGSLPVPLFDTQVAAGYLNL-GFSMG 119
Query: 226 Y--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
Y L++T G+ K R DW QRPL A + YA D +L+ + + L L ++
Sbjct: 120 YSRLVQTLLGIELPKGETRSDWLQRPLSATQISYAAEDVLHLVEVYQALTQRLS--AEKH 177
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
++ +D V SR E P E L +S
Sbjct: 178 AWVLEDGAELVAALSR--------------EVDPDE---------LWREAKLAWKLSRQQ 214
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
Q ++R LCAWR+ AR ++ +L + ++ LA P N
Sbjct: 215 QAVLRALCAWRERQARARNQPRNRILREHSLWPLARTQPDN 255
>gi|425898087|ref|ZP_18874678.1| ribonuclease D [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397891324|gb|EJL07802.1| ribonuclease D [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 377
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 113/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + K F A+DTE + +F L+Q+ + YL+D + + D+
Sbjct: 7 WIRDNDSLGQFCTEWQKLPFVALDTEFMRVDTFYPIAGLLQVGDGQRAYLIDPLTI-DDW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L + V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENSAVVKVVHACSEDLEVLLRLTGSLPTPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L +
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFTRLRPKLSE---------- 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+N+VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYNWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLAKSQPDN 255
>gi|302846314|ref|XP_002954694.1| hypothetical protein VOLCADRAFT_106479 [Volvox carteri f.
nagariensis]
gi|300260113|gb|EFJ44335.1| hypothetical protein VOLCADRAFT_106479 [Volvox carteri f.
nagariensis]
Length = 756
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED------------ 158
WV + QL L L +E +DTE L + G LIQ+S +
Sbjct: 203 WVSSPKQLYWLGQRLRQERQIGLDTEASPLLCYHGRVCLIQLSVWDDTASPCDGGDDGGS 262
Query: 159 -----------------YLVDTIALHDEI-SILQPFFADPGVCKVFHGSDNDVMWLQRDF 200
+LVD +AL + + L ADP V KV HG NDV+WLQRDF
Sbjct: 263 SGCSSGSGGSGGGGGHVWLVDALALRGHVGAALGGLMADPRVVKVLHGGGNDVVWLQRDF 322
Query: 201 HIYVVNLFDTAKACE 215
+Y+VN+FDT KA +
Sbjct: 323 RVYLVNVFDTEKASQ 337
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 215 EVLSKPQKSLAYLLETYCGV---ATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKC 271
+VL ++LA LL G+ A QR DWR+RPLP +L+YA D YL Y+A
Sbjct: 399 KVLGYENRALASLLSRIVGLDVGAEKAAGQRADWRRRPLPPALLRYAAADVAYLPYLADV 458
Query: 272 LVAELKQQG 280
L EL G
Sbjct: 459 LRRELAALG 467
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 863 GHGPHGKQVVDYLLREYGEDGIRQFCQRWRQVFVEALHPHFLPAGWDVMH 912
GH HG+ VV ++ GE + Q +R+R FVEAL P +LP W V H
Sbjct: 646 GHLWHGECVVKLAMQRGGEQELMQLIKRFRTCFVEALQPQYLPPAWGVDH 695
>gi|229815608|ref|ZP_04445935.1| hypothetical protein COLINT_02659 [Collinsella intestinalis DSM
13280]
gi|229808838|gb|EEP44613.1| hypothetical protein COLINT_02659 [Collinsella intestinalis DSM
13280]
Length = 377
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 26/279 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T L N A+DTE +++ L+Q++T E ++D +A+ D+
Sbjct: 1 MYISTNEDLTAFCNRARAFSAIAIDTEFLREKTYHAKLCLVQVATPDECVVIDPLAI-DD 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+ L D KVFH D+ L +FDT A L + Q S L+
Sbjct: 60 LGPLAELMTDVDTLKVFHACSQDMEVLCHALGSVPAPIFDTQVAAGFLGERAQCSYHNLV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
T+CGV+ K DW +RPL + ++YA D YL+ + + ++L G ++ D
Sbjct: 120 STFCGVSLPKTESLTDWSRRPLSPKQIEYALDDVRYLIDAYRVIESKLHSLGR-TAWVRD 178
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ A RS+ + F R+ V++ + + R
Sbjct: 179 EIRPLADPAHYRSD-------------------PRAAFKRVKR----VNACTRRQLAVAR 215
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTD 387
L +WR+ A D ++V+SD+ ++AL +AP D
Sbjct: 216 ELASWREQRAETRDIPRKWVMSDEVLLALCKRAPQTVED 254
>gi|330991792|ref|ZP_08315742.1| Ribonuclease D [Gluconacetobacter sp. SXCC-1]
gi|329761260|gb|EGG77754.1| Ribonuclease D [Gluconacetobacter sp. SXCC-1]
Length = 395
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 14/225 (6%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V V T ++L + L +E F +DTE R++ L+Q++ E + ++DT A +
Sbjct: 13 VLVTTTAELEAVTARLRREPFVTIDTEFVRERTYWPELCLVQLAGENDVVVIDTTAPGID 72
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L D GV KVFH + D+ F LFDT A V Q L+
Sbjct: 73 LSSLGGLLDDAGVIKVFHAARQDLEIFLHLFDRLPAALFDTQVAAMVAGYGDQVGYDNLV 132
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG-------- 280
+ GV +K + DW RPL A + YA D YL + L+A+L+++G
Sbjct: 133 WSLLGVQIDKSHRFSDWSVRPLSAAQIGYAAADVTYLRQVYGQLLAQLEKEGRLDWVAAE 192
Query: 281 -----NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA 320
N ++ PD + R SN L V + GEA
Sbjct: 193 LDVLNNPATFRPDPLTLWEKMRPRTSNRRMLGVLRAIVAWREGEA 237
>gi|192361069|ref|YP_001982899.1| ribonuclease D [Cellvibrio japonicus Ueda107]
gi|190687234|gb|ACE84912.1| ribonuclease D [Cellvibrio japonicus Ueda107]
Length = 378
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 112/278 (40%), Gaps = 30/278 (10%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+W+E QL EL ++ AVDTE +F L+QI K YL+D +A+ D
Sbjct: 8 IWIERADQLAELCVGWRQQGAIAVDTEFMRTDTFYPIAGLLQIGDGKGCYLIDPLAIAD- 66
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--L 227
L+ D V KV H D+ QR + LFDT + + L Y L
Sbjct: 67 WQPLRELLLDGKVIKVLHSCSEDLEVFQRWLDLVPSPLFDT-QIGAAFANLGFGLGYANL 125
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD-AHYLLYIAKCLVAELKQQGNENSYC 286
++T G+ K R DW QRPL L+YA D AH L+ K L
Sbjct: 126 VKTLLGIEIPKDETRSDWLQRPLSQSQLKYAALDVAHMLVVYGKLLQ------------- 172
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+L+ S+R L+ + +A A F G + +
Sbjct: 173 -------ILKTSQR-----LEWVKSDCADLVEQARAPDHFDDAYQKVGFAWKLRPQELAV 220
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R+LC WR+ AR D ++ + ++ +A K P +
Sbjct: 221 LRQLCIWRETQARQRDIPRNRLIKEPSLWDIARKKPRD 258
>gi|399007815|ref|ZP_10710314.1| ribonuclease D [Pseudomonas sp. GM17]
gi|398119266|gb|EJM08970.1| ribonuclease D [Pseudomonas sp. GM17]
Length = 377
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 113/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + K F A+DTE + +F L+Q+ + YL+D + + D+
Sbjct: 7 WIRDNDSLGQFCTEWQKLPFVALDTEFMRVDTFYPIAGLLQVGDGQRAYLIDPLTI-DDW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L + V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENSAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L +
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFTRLRPKLSE---------- 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+N+VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYNWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLAKSQPDN 255
>gi|218892602|ref|YP_002441471.1| ribonuclease D [Pseudomonas aeruginosa LESB58]
gi|254239667|ref|ZP_04932989.1| ribonuclease D [Pseudomonas aeruginosa 2192]
gi|386059670|ref|YP_005976192.1| ribonuclease D [Pseudomonas aeruginosa M18]
gi|421181719|ref|ZP_15639210.1| ribonuclease D [Pseudomonas aeruginosa E2]
gi|126193045|gb|EAZ57108.1| ribonuclease D [Pseudomonas aeruginosa 2192]
gi|218772830|emb|CAW28624.1| ribonuclease D [Pseudomonas aeruginosa LESB58]
gi|347305976|gb|AEO76090.1| ribonuclease D [Pseudomonas aeruginosa M18]
gi|404543287|gb|EKA52574.1| ribonuclease D [Pseudomonas aeruginosa E2]
Length = 374
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 8 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 67 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 125
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 126 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 184 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 219
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 220 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 260
>gi|421504183|ref|ZP_15951127.1| ribonuclease D [Pseudomonas mendocina DLHK]
gi|400345284|gb|EJO93650.1| ribonuclease D [Pseudomonas mendocina DLHK]
Length = 377
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 112/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L E A F A+DTE + +F L+Q+S + YL+D + + D+
Sbjct: 7 WIRDNASLAEHCAAWRALPFVALDTEFMRVDTFYPIAGLLQVSGGDKAYLIDPLCI-DDW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L V KV H D+ R V LFDT A L+ S+ Y L+
Sbjct: 66 RPLAELLQAQTVVKVLHSCSEDLEVFLRLTGSLPVPLFDTQVAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+T G+ K R DW QRPL A + YA D +L+ + + L L ++++ +
Sbjct: 125 QTLLGIELPKGETRSDWLQRPLSATQISYAAEDVLHLVEVYQVLTQRLS--AEKHAWVLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D V SR E P E L +S Q ++R
Sbjct: 183 DGAELVAALSR--------------EVDPDE---------LWREAKLAWKLSRQQQAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR ++ +L + ++ LA P N
Sbjct: 220 ALCAWRERQARARNQPRNRILREHSLWPLARTQPDN 255
>gi|350559619|ref|ZP_08928459.1| ribonuclease D [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781887|gb|EGZ36170.1| ribonuclease D [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 381
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + L L +A++ + A+DTE +++ LIQ++T VD +AL I
Sbjct: 7 ITTDTALRALLDAIAGSHWVAMDTEFIREKTYFPKLCLIQLATPDHIACVDPLALGG-IG 65
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVN------LFDTAKACEVLSK-PQKSL 224
L D V KVFH + D+ L Y+V +FDT A +L Q
Sbjct: 66 ALDELLQDSSVLKVFHAASQDLEVL------YLVTGKVPSPVFDTQVAASLLGHGEQVGY 119
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
A L+E +K R DW +RPL L+YA+ D +L + L EL+ G +
Sbjct: 120 ANLVEAVLHRELDKTQSRTDWARRPLQPAQLEYARDDVRFLTELFLQLQKELEALGRLDW 179
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
P+ ++ T+ + P A A +R ++G +
Sbjct: 180 LQPE-----------------MEALTRPEQYRPDPAQA----WRRVSGH---KRLKPRDL 215
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++R L AWR+ AR D R+VLSD A++ +A P +
Sbjct: 216 AVLRELAAWRENEARNLDRPRRWVLSDDALLTIARTRPQD 255
>gi|387889084|ref|YP_006319382.1| ribonuclease D [Escherichia blattae DSM 4481]
gi|414595188|ref|ZP_11444817.1| ribonuclease D [Escherichia blattae NBRC 105725]
gi|386923917|gb|AFJ46871.1| ribonuclease D [Escherichia blattae DSM 4481]
gi|403193863|dbj|GAB82469.1| ribonuclease D [Escherichia blattae NBRC 105725]
Length = 374
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 26/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T L E+ A + +DTE R++ LIQ+ + L+D +A+ D S
Sbjct: 7 ITTNEALAEVCQAARQFPVLTLDTEFVRTRTYYPQLGLIQLYDSERISLIDPLAISD-WS 65
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLET 230
+ AD V K+ H D+ F + + DT +P A L+E
Sbjct: 66 PFKALLADRNVTKILHAGSEDLEVFANSFGMMPDPMIDTQVLAAFCGRPLSCGFATLVEA 125
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
YCGV +K R DW RPL +YA D ++LL IA+ L+ E + G ++ + +
Sbjct: 126 YCGVVLDKSESRTDWLARPLTERQCEYAAGDVYWLLPIARKLIDETQTSGWMDAAMDECR 185
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L +RR++ + Q +EI G + + ++ L
Sbjct: 186 ----LMMARRADVLDPQEAWREI--------------------GNAWQLRTRQLGCLQLL 221
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+WR AR D ++ F++ ++ + +A P +
Sbjct: 222 ASWRLRKARERDMAVNFIVREEHLWQVARYMPGS 255
>gi|116049246|ref|YP_791951.1| ribonuclease D [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390324|ref|ZP_06879799.1| ribonuclease D [Pseudomonas aeruginosa PAb1]
gi|416873541|ref|ZP_11917580.1| ribonuclease D [Pseudomonas aeruginosa 152504]
gi|421175630|ref|ZP_15633306.1| ribonuclease D [Pseudomonas aeruginosa CI27]
gi|115584467|gb|ABJ10482.1| ribonuclease D [Pseudomonas aeruginosa UCBPP-PA14]
gi|334844716|gb|EGM23287.1| ribonuclease D [Pseudomonas aeruginosa 152504]
gi|404532027|gb|EKA41953.1| ribonuclease D [Pseudomonas aeruginosa CI27]
Length = 374
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 8 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 67 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 125
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 126 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 184 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 219
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 220 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 260
>gi|313106280|ref|ZP_07792525.1| ribonuclease D [Pseudomonas aeruginosa 39016]
gi|355645431|ref|ZP_09054144.1| ribonuclease D [Pseudomonas sp. 2_1_26]
gi|386065119|ref|YP_005980423.1| ribonuclease D [Pseudomonas aeruginosa NCGM2.S1]
gi|421155212|ref|ZP_15614693.1| ribonuclease D [Pseudomonas aeruginosa ATCC 14886]
gi|421169151|ref|ZP_15627193.1| ribonuclease D [Pseudomonas aeruginosa ATCC 700888]
gi|310879027|gb|EFQ37621.1| ribonuclease D [Pseudomonas aeruginosa 39016]
gi|348033678|dbj|BAK89038.1| ribonuclease D [Pseudomonas aeruginosa NCGM2.S1]
gi|354828894|gb|EHF12994.1| ribonuclease D [Pseudomonas sp. 2_1_26]
gi|404520842|gb|EKA31492.1| ribonuclease D [Pseudomonas aeruginosa ATCC 14886]
gi|404527609|gb|EKA37756.1| ribonuclease D [Pseudomonas aeruginosa ATCC 700888]
Length = 374
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 8 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 67 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 125
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 126 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 184 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 219
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 220 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 260
>gi|157375657|ref|YP_001474257.1| ribonuclease D [Shewanella sediminis HAW-EB3]
gi|157318031|gb|ABV37129.1| ribonuclease D [Shewanella sediminis HAW-EB3]
Length = 369
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 119/293 (40%), Gaps = 28/293 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +++ + L EL + + +DTE R++ LIQ K L+D IA+
Sbjct: 3 AFQYIDDDASLTELVSQYRQSTLLVLDTEFVRTRTYYARLGLIQAYDGKTLALIDPIAVG 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ +S +P + V H D+ R+ + LFD+ A L L Y
Sbjct: 63 N-LSEFWSLLTEPEITTVLHSCSEDLEVFARNGQCQPIRLFDSQIAAS-LCGFGHGLGYA 120
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E +A +K R DW +RPL L YA D +YL + L+ +L+
Sbjct: 121 KLVEQTLNIALDKGESRTDWMKRPLSKAQLTYAANDVYYLYELYPQLIQKLEDT------ 174
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
D+ ++V E R L E+ + ++ N +SS
Sbjct: 175 ---DRLDWVFEEGERMTQGRLTPPDLELA-----------YLKVKNA----FQLSSQQLA 216
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSD 398
++ L WR A D ++ FV+ D A+I LA K P N ++ I D +
Sbjct: 217 YLKVLAKWRLKKALSRDLAVGFVVKDHALIGLAKKQPKNTNELNKMIELTDQE 269
>gi|336452077|ref|ZP_08622510.1| ribonuclease D [Idiomarina sp. A28L]
gi|336281124|gb|EGN74408.1| ribonuclease D [Idiomarina sp. A28L]
Length = 379
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 115/287 (40%), Gaps = 28/287 (9%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
S +F + +L + + A+DTE R+ L+Q T +E LVD +
Sbjct: 2 SKNFRMINATEELVAFCDLAKANGWLALDTEFVRTRTLYAELGLVQARTGEEIVLVDPLN 61
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK-PQKSL 224
D ++ Q +D + V H + D+ QR+ + LFDT A +S Q
Sbjct: 62 GVDLSALWQLLRSD--IITVLHAAGEDLEIFQRN-NAAPRFLFDTQIANAFISDGTQIGY 118
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
A L+E V+ +K R DW QRPL L+YA D YL + L A+ G E
Sbjct: 119 AGLVEQMLNVSVDKSQSRTDWLQRPLSPAQLEYAAADVEYLAELYPTLRAKTIDSGMETL 178
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
+ C + K E A I GGVS + +
Sbjct: 179 VLAE----------------CQEQVAKRARETVAELAWRDI--------GGVSLLDGSGR 214
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTT 391
++R L WR +AR + +L FV D + +A P+NR ++ T
Sbjct: 215 AILRELAQWRLELARERNIALPFVARDHILTDIARNKPSNRHELSQT 261
>gi|416856557|ref|ZP_11912131.1| ribonuclease D [Pseudomonas aeruginosa 138244]
gi|420140701|ref|ZP_14648441.1| ribonuclease D [Pseudomonas aeruginosa CIG1]
gi|421161990|ref|ZP_15620882.1| ribonuclease D [Pseudomonas aeruginosa ATCC 25324]
gi|424940506|ref|ZP_18356269.1| ribonuclease D [Pseudomonas aeruginosa NCMG1179]
gi|451988440|ref|ZP_21936569.1| Ribonuclease D [Pseudomonas aeruginosa 18A]
gi|334841819|gb|EGM20440.1| ribonuclease D [Pseudomonas aeruginosa 138244]
gi|346056952|dbj|GAA16835.1| ribonuclease D [Pseudomonas aeruginosa NCMG1179]
gi|403246543|gb|EJY60259.1| ribonuclease D [Pseudomonas aeruginosa CIG1]
gi|404537329|gb|EKA46933.1| ribonuclease D [Pseudomonas aeruginosa ATCC 25324]
gi|451753938|emb|CCQ89092.1| Ribonuclease D [Pseudomonas aeruginosa 18A]
Length = 374
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 8 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 67 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 125
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 126 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 184 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 219
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 220 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 260
>gi|392985222|ref|YP_006483809.1| ribonuclease D [Pseudomonas aeruginosa DK2]
gi|419751377|ref|ZP_14277789.1| ribonuclease D [Pseudomonas aeruginosa PADK2_CF510]
gi|384402151|gb|EIE48502.1| ribonuclease D [Pseudomonas aeruginosa PADK2_CF510]
gi|392320727|gb|AFM66107.1| ribonuclease D [Pseudomonas aeruginosa DK2]
Length = 376
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 10 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 68
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 69 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 127
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 128 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 185
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 186 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 221
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 222 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 262
>gi|298245785|ref|ZP_06969591.1| 3'-5' exonuclease [Ktedonobacter racemifer DSM 44963]
gi|297553266|gb|EFH87131.1| 3'-5' exonuclease [Ktedonobacter racemifer DSM 44963]
Length = 402
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT--------ALIQISTEKEDYLV 161
+W+E QL L + A+D E +RS + AL+Q++ EK+ ++V
Sbjct: 37 LWIENSEQLLHAVELLKQSPVVAIDAEFTQVRSLSAESNGSTVPRLALLQLAIEKQCFVV 96
Query: 162 DTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT-AKACEVLSKP 220
DT+ L D +S L +DP V + HG+ D+ + + ++V + +D A + V +
Sbjct: 97 DTLRLKD-LSPLNTVVSDPDVIVLLHGAGADLR-VMAERGVFVAHYYDLEATSRSVFGQH 154
Query: 221 QKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCL 272
+ SLA +L + +K LQR DW +RPLP M+ YA DA L + L
Sbjct: 155 ESSLAAMLWRAFHMRLDKSLQRTDWTRRPLPPAMVAYAARDAEATLALYSWL 206
>gi|453046792|gb|EME94507.1| ribonuclease D [Pseudomonas aeruginosa PA21_ST175]
Length = 393
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 27 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 85
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 86 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 144
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 145 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 202
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 203 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 238
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 239 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 279
>gi|407365829|ref|ZP_11112361.1| ribonuclease D [Pseudomonas mandelii JR-1]
Length = 377
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 134/328 (40%), Gaps = 46/328 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA L++A+ + +L+ + D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDA---LHLAEVFI-QLRPK------LSD 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +EI+ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREIDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR------TDVYTTIAQADSD--VD 400
LCAWR+ AR D ++ + ++ LA P N D++ + D + +D
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLD 279
Query: 401 CLNLSSS---------LPSPSPVVCSHL 419
+ S S +P P PV ++L
Sbjct: 280 LIKRSGSVSPDQWPPAVPEPLPVDAANL 307
>gi|254282849|ref|ZP_04957817.1| ribonuclease D [gamma proteobacterium NOR51-B]
gi|219679052|gb|EED35401.1| ribonuclease D [gamma proteobacterium NOR51-B]
Length = 372
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 111/276 (40%), Gaps = 32/276 (11%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S+ WV++ L E+ + F A+DTE +F AL+QI+T + +L+D + L
Sbjct: 2 SWEWVDSDRGLAEVVAQVIDGDFVAIDTEFRRRDTFWPEVALVQIATADQVWLIDPLPLT 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAY 226
D L + KV H + D+ Q + LFDT KA +L S A
Sbjct: 62 D-TGPLAELLQKSTLTKVLHSAGEDLEVFQAWLGVLPSPLFDTQKAAALLGYGFGLSYAK 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E C V+ +K DW RPL + +YA D YL+ + L+ + QG
Sbjct: 121 LVEAVCQVSLDKDETNSDWLVRPLTSAQCRYAAQDVTYLVDVYSRLLGDAGTQG------ 174
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++LE + K ++ + A ++ + LL+
Sbjct: 175 ---RLEWILEEGEGVSVGGRGPLAKFRNAWKLQPEALAVLYGLLD--------------- 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
WR+ AR D ++L D+ I + P
Sbjct: 217 ------WREQQARERDRPRNWILHDKVINEIVRALP 246
>gi|71404660|ref|XP_805018.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70868258|gb|EAN83167.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 429
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 21/165 (12%)
Query: 519 RLLCYCDRKKLEWYL-TRDLAKLVE-------------DNPPAIMLLFEPKGRPEDEGN- 563
RL+ D+ K EWY+ + L K++E AI L F P ++ +
Sbjct: 2 RLVFTVDKSKAEWYVYKKGLGKVIEWRETAVEETQKTEKEIAAIQLNFSPDFSKYNDAHI 61
Query: 564 ----EFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEV 619
+++ ++K+N CV CGE +R+ ++P YR +FP SH S+D++LLC C
Sbjct: 62 RRNLDYFRRAKENQCVVCGETKELVRFAVVPLAYRKYFPSVYMSHNSYDLLLLCTVCFAR 121
Query: 620 AHAAAEKYKKQISAEFGIPL--FIHKVADSRKAEARPGFSASITN 662
A ++ +++++ +FG+PL K ++ R+A+ + +I+N
Sbjct: 122 ARRLYDEERRRVAVDFGVPLGHLTPKESELRRAQLQQQMPTNISN 166
>gi|430742153|ref|YP_007201282.1| ribonuclease D [Singulisphaera acidiphila DSM 18658]
gi|430013873|gb|AGA25587.1| ribonuclease D [Singulisphaera acidiphila DSM 18658]
Length = 402
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 124/281 (44%), Gaps = 33/281 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T S L EL + L FA DTE S +F LIQ++T + ++D +A+ D
Sbjct: 10 IATPSALGELVDHLRASGRFAFDTEFVSEETFEPVLCLIQVATRERLAVIDPLAIED--- 66
Query: 172 ILQPFF---ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
L PF+ DP V V H + D+ + +FD A ++ SL L
Sbjct: 67 -LSPFWDLVIDPTVEVVMHAASEDLRICRFKTGTVPRRVFDVQIAAGLVGFGYPLSLVNL 125
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ + + R DWR+RPL L+YA D YLL +A L A+LK+ G + +
Sbjct: 126 IGQALRITVSGGETRTDWRRRPLTGAQLRYALDDVRYLLDLADLLSAQLKELGRVD-WAE 184
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ FV +++ +V + PG LN +G S+
Sbjct: 185 GEFAQFV-------SSIQNRVEEERWRRLPG--------LHQLNRRGLESA--------- 220
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
RRL WR AR + +R +L D ++A+A + PA+R D+
Sbjct: 221 RRLAEWRFGEARRSNRPIRQLLRDDLLVAIAKRQPASRRDL 261
>gi|118395219|ref|XP_001029962.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89284244|gb|EAR82299.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1087
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 144 LGFTALIQISTEKEDYLVDTIALHDEISI-LQPFFADPGVCKVFHGSDNDVMWLQRDFHI 202
L F +Q+ST ++++D + L +S+ L+ F P KVFHG + D+ L++D +
Sbjct: 912 LSFICTLQLSTLSSNFVIDILNLSKSVSVHLKSIFESPKFVKVFHGGETDLKLLKKDLNF 971
Query: 203 YVVNLFDTAKACEVLSK--PQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQT 260
+VN+FDTAKA +K SL+ L + Y +K Q DWR RPLP ML YA
Sbjct: 972 NLVNIFDTAKAYLKQNKGAGSVSLSSLSQQYLNYNVDKQYQTSDWRIRPLPKPMLNYAMY 1031
Query: 261 DAHYLLYIAKCLVAELKQQ 279
D+ L + + + + Q+
Sbjct: 1032 DSFITLILFFVMKSTISQE 1050
>gi|387892742|ref|YP_006323039.1| ribonuclease D [Pseudomonas fluorescens A506]
gi|387162947|gb|AFJ58146.1| ribonuclease D [Pseudomonas fluorescens A506]
Length = 377
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLSRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYTRLRPQLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+EI+ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREIDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|254786713|ref|YP_003074142.1| ribonuclease D [Teredinibacter turnerae T7901]
gi|237686111|gb|ACR13375.1| ribonuclease D [Teredinibacter turnerae T7901]
Length = 393
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 124/325 (38%), Gaps = 43/325 (13%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
R W+ T ++L + + AVDTE +++ T LIQ++ YL+D +
Sbjct: 6 RKQPVQWITTAAELKACCDKWITQRMLAVDTEFMRSQTYYPITGLIQVNDGNTSYLIDPL 65
Query: 165 ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKS 223
A D+ + L +PGV KV H D+ R I ++ DT A +
Sbjct: 66 AF-DDFTPLAELMENPGVLKVLHSCSEDLEVFHRFLGIVPKHMLDTQIASALCGYGFSVG 124
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
L+ G K R DW RPL + + YA D YL +A LV +LK G
Sbjct: 125 FGKLVHAVLGEELPKEETRSDWLHRPLSSAQIDYAAIDVEYLYKLASILVLKLKNLGRLT 184
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
D EA R + ++ A +RL Q +
Sbjct: 185 WVAED------CEAMLRQFA--------DNQAVDNSDARIKQAWRLSQRQLAI------- 223
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN---------------RTDV 388
+++L WR+ +A+ D V+ + +++ LA + P + RTD
Sbjct: 224 ---LKKLAQWREEVAQRRDVPRNRVIKEHSLLDLAQRTPDHVAQLRKLDGINERMIRTDG 280
Query: 389 YTTIA--QADSDVDCLNLSSSLPSP 411
IA QA DV L + LP P
Sbjct: 281 ADLIACIQAGMDVPEHELPAPLPRP 305
>gi|398861072|ref|ZP_10616709.1| ribonuclease D [Pseudomonas sp. GM79]
gi|398233675|gb|EJN19587.1| ribonuclease D [Pseudomonas sp. GM79]
Length = 377
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA L++A+ V +L+ + D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDA---LHLAEVFV-QLRPK------LSD 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|404401962|ref|ZP_10993546.1| ribonuclease D [Pseudomonas fuscovaginae UPB0736]
Length = 377
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + F A+DTE + +F LIQI YL+D + + D
Sbjct: 7 WIRDNDSLGRHCTEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGSSAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLDNPAVVKVVHACSEDLEVLLRLTGSLPTPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQVSYAAEDALHLAEVYSRLRPQLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREVDPYEVYRDA-KLAWKLSRSQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIIREHSLWPLAKSQPDN 255
>gi|398863884|ref|ZP_10619426.1| ribonuclease D [Pseudomonas sp. GM78]
gi|398246299|gb|EJN31795.1| ribonuclease D [Pseudomonas sp. GM78]
Length = 377
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 111/282 (39%), Gaps = 41/282 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + F A+DTE + +F L+Q+ + YL+D + + D
Sbjct: 7 WIRDNDSLGRFCTEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGERAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPQLS----------D 174
Query: 289 DKFNFVLE------ASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
DK+ +VLE A+ R +VY + + ++L Q V
Sbjct: 175 DKYAWVLEDGAELVANLRREIDPFEVYRD-----------AKLAWKLSRAQLAV------ 217
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R LCAWR+ AR D ++ + ++ LA P N
Sbjct: 218 ----LRELCAWREQEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|335043651|ref|ZP_08536678.1| ribonuclease D [Methylophaga aminisulfidivorans MP]
gi|333790265|gb|EGL56147.1| ribonuclease D [Methylophaga aminisulfidivorans MP]
Length = 381
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 119/274 (43%), Gaps = 26/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V T++ LN L L+ + AVDTE H +++ LIQ+++ VD +A+ D +S
Sbjct: 6 VNTEAGLNTLCQQLADSEWLAVDTEFHREKTYFPQLCLIQVASNDVIACVDPLAISD-LS 64
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L F + VFH + D+ + +FDT A VL Q L++
Sbjct: 65 PLMALFYSENITIVFHAARQDLELFFLMKNALPPKVFDTQLAATVLGYGDQIGYGNLVKQ 124
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
GV +K R DWRQRPL + YA D YL + LV EL + G + DD
Sbjct: 125 CLGVELDKGQARTDWRQRPLSEAQVDYAADDVRYLRQLYLQLVDELNRTGR-VEWLSDD- 182
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
F ++ E+Y + S + R + G G + S V +++ L
Sbjct: 183 --FAALTAK--------------ETYQEDPQQS--WLR-VKGAGRLKSQQLV---ILQEL 220
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
AWR+ A D R++L D ++ LA +P
Sbjct: 221 GAWREKRAIEVDLPRRWILKDDVMLDLARFSPTT 254
>gi|389685256|ref|ZP_10176580.1| ribonuclease D [Pseudomonas chlororaphis O6]
gi|388550909|gb|EIM14178.1| ribonuclease D [Pseudomonas chlororaphis O6]
Length = 377
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 112/274 (40%), Gaps = 29/274 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + K F A+DTE + +F L+Q+ + YL+D + + D+
Sbjct: 7 WIRDNDSLGQFCTEWQKLPFVALDTEFMRVDTFYPIAGLLQVGDGQRAYLIDPLTI-DDW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L + V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENSAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L +
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFTQLRPKLSE---------- 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+N+VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYNWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
LCAWR+ AR D ++ + ++ LA P
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLAKSQP 253
>gi|398941935|ref|ZP_10670028.1| ribonuclease D [Pseudomonas sp. GM41(2012)]
gi|398161300|gb|EJM49536.1| ribonuclease D [Pseudomonas sp. GM41(2012)]
Length = 377
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 116/276 (42%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI YL+D +++ D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLSI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA L++A+ V +L+ + D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDA---LHLAEVFV-QLRPK------LSD 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|339444858|ref|YP_004710862.1| ribonuclease D [Eggerthella sp. YY7918]
gi|338904610|dbj|BAK44461.1| ribonuclease D [Eggerthella sp. YY7918]
Length = 381
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
A+DTE +++ LIQ++T+ E +VD AL D++ L P + V K+FH
Sbjct: 22 LAIDTEFMREKTYYAKLCLIQLATDDEVAIVDPFAL-DDLGALAPVLQNEQVMKLFHAGR 80
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVATNKFLQREDWRQRP 249
D+ + R+ + LFDT A +L Q+ A L+ CGV K DW +RP
Sbjct: 81 QDLEIILREVGVLPKPLFDTQVAAALLGHTQQIGYAALVHAECGVTLKKIDSFTDWSRRP 140
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
L L+YA D YL + + + +L + + PD F + SN +
Sbjct: 141 LSESQLEYAADDVVYLPRMYERMRGQLMKLNRLSWLDPD--FEEL------SNPAKYAIN 192
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
+E +R L VS +S R + +WR+L A+ D ++V+
Sbjct: 193 ERE-------------RYRRLK---RVSQLSRRQLAAAREVASWRELEAQRRDVPRKWVM 236
Query: 370 SDQAII 375
+D+ I+
Sbjct: 237 TDEQIV 242
>gi|124809664|ref|XP_001348647.1| Rrp6 homologue, putative [Plasmodium falciparum 3D7]
gi|23497545|gb|AAN37086.1| Rrp6 homologue, putative [Plasmodium falciparum 3D7]
Length = 1136
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 76 SHPYELEITALLENPRPEFD------FSNVDLDLQR-----SDSFVWVETKSQLNELANA 124
+HPY+ EI +++ R + + F ++++L++ ++ ++ K+ L + N
Sbjct: 495 NHPYKYEIENIIKEYRNDNNNVTISNFLEINIELKKLGDINKKAYKIIDNKNDLINMINN 554
Query: 125 LS---KEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPG 181
+ +E ++ + + R++ GFT++I I T +Y++D + +++ I+ DP
Sbjct: 555 IKLNYEEKKISIMIKVNYKRTYRGFTSIIMIGTNNMNYIIDVFNMFEDLYIINDITTDPN 614
Query: 182 VCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVA---TNK 238
+ K+ + + N + LQ+DF IY VN+FD A C + +L YL+ Y NK
Sbjct: 615 ILKITYNAPNIINQLQKDFSIYFVNIFDIA-ICSNYLNFKNNLNYLIYKYFNTVLYYKNK 673
Query: 239 FLQREDWRQRPLPAEMLQYAQTDAHYL 265
LQ RP+ +M+ Q + +L
Sbjct: 674 ILQNV-LITRPIEPDMVDVIQNEFTFL 699
>gi|398888278|ref|ZP_10642709.1| ribonuclease D [Pseudomonas sp. GM55]
gi|398191107|gb|EJM78308.1| ribonuclease D [Pseudomonas sp. GM55]
Length = 377
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 113/277 (40%), Gaps = 31/277 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L L + F A+DTE + +F L+Q+ + YL+D + + D
Sbjct: 7 WIRDNDSLGRLCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGERAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEA-AASSIFFRLLNGQGGVSSISSVTQDLV 347
DK+ +VLE + +EI+ P E + + ++L Q V +
Sbjct: 175 DKYVWVLE----DGAELVANLRREID--PNEVYRDAKLAWKLSRAQLAV----------L 218
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
R LCAWR+ AR D ++ + ++ LA P N
Sbjct: 219 RELCAWREKEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|107100745|ref|ZP_01364663.1| hypothetical protein PaerPA_01001773 [Pseudomonas aeruginosa PACS2]
gi|421515925|ref|ZP_15962611.1| ribonuclease D [Pseudomonas aeruginosa PAO579]
gi|404349653|gb|EJZ75990.1| ribonuclease D [Pseudomonas aeruginosa PAO579]
Length = 380
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 14 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 72
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 73 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 131
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L L ++ + ++ +
Sbjct: 132 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEE--KRAWLLE 189
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 190 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 225
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 226 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 266
>gi|401426606|ref|XP_003877787.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494033|emb|CBZ29329.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 890
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 29/164 (17%)
Query: 506 PVYHNCRIYANDGRLLCYCDRKKLEWYLTR-DLAKLVEDNPPA----------------- 547
P Y N ++ D +L D+ K +WY+ + LA++V+ PA
Sbjct: 370 PYYDNISVFDPDMQLAFTVDKTKADWYVNKKGLARVVQWRTPAGAIVREEEKATFSEAVD 429
Query: 548 ------IMLLFEPK-GRPED----EGNEFYIQSKKNICVSCGEGNHYLRYRIIPSCYRIH 596
I L F P R D +++ Q K+NICV C G +R+ ++P YR
Sbjct: 430 NLEVSAIQLSFAPDFSRYSDVHIRRNMDYFRQPKENICVVCSSGGSLVRFAVVPLMYRRF 489
Query: 597 FPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLF 640
FP SH S+D++LLC C + ++ ++ ++ +FGIPL
Sbjct: 490 FPSVYMSHNSYDLLLLCPHCFAKSRRLYDRLRQNVADDFGIPLM 533
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 837 DECENSSVQNGFGSSSP---TPNSKVSLLGH-GPHGKQVVDYLLREY---------GEDG 883
DE S+ SS P T +S+VS + + H V+ LL +Y G+
Sbjct: 798 DEMRESNGSLSQRSSPPADMTADSEVSEVPYVDSHAFLVIRLLLEKYSYAPSLAKTGDHA 857
Query: 884 IRQFCQRWRQVFVEALHPHFLPAGW 908
+ QF RWR F+E +HP LP GW
Sbjct: 858 VGQFIFRWRSSFLEGMHPQHLPRGW 882
>gi|423096745|ref|ZP_17084541.1| ribonuclease D [Pseudomonas fluorescens Q2-87]
gi|397886382|gb|EJL02865.1| ribonuclease D [Pseudomonas fluorescens Q2-87]
Length = 377
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 132/328 (40%), Gaps = 46/328 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI K YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L + ++++ +
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLSDE--KSAWVLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D V A+ R +VY + + + ++L Q V +R
Sbjct: 183 DGAELV--ANLRREVDPYEVYRE-----------AKLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR------TDVYTTIAQADSD--VD 400
LCAWR+ AR D ++ + ++ LA P N D++ + D + +D
Sbjct: 220 ELCAWREREARARDLPRNRIIREHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLD 279
Query: 401 CLNLSSSLP---------SPSPVVCSHL 419
+ ++S+P P P+ S L
Sbjct: 280 LIKRAASVPPEQWPPAVAEPLPIEASAL 307
>gi|15596491|ref|NP_249985.1| ribonuclease D [Pseudomonas aeruginosa PAO1]
gi|9947230|gb|AAG04683.1|AE004559_2 ribonuclease D [Pseudomonas aeruginosa PAO1]
Length = 374
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 8 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 67 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 125
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L L ++ + ++ +
Sbjct: 126 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEE--KRAWLLE 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 184 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 219
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 220 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 260
>gi|152996550|ref|YP_001341385.1| ribonuclease D [Marinomonas sp. MWYL1]
gi|150837474|gb|ABR71450.1| ribonuclease D [Marinomonas sp. MWYL1]
Length = 384
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 110/286 (38%), Gaps = 34/286 (11%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+ VWV L + + AVDTE ++ T LIQIS + L+D +++
Sbjct: 14 NIVWVADNESLASWCDYWADLPVIAVDTEFIRRTTYFPITGLIQISEGDKAVLIDPLSI- 72
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
DE L+ DP V KVFH D+ R + +DT + E + Q SL+Y
Sbjct: 73 DEWEPLRNLMVDPSVMKVFHACSEDLDVFDRLLGVLPTPFYDT-QIGEAYASAQWSLSYV 131
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQ---GNE 282
L+ Y + K R DW QRPL +YA D YL + +A L+ + G
Sbjct: 132 KLIHEYLQIEVAKDETRSDWVQRPLTDAQKRYAALDVVYLAKVYPMQIARLEAKNMLGWV 191
Query: 283 NSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
C K+ + + + N +G ++
Sbjct: 192 MEDCDSLKWQYQMNSDPEQN---------------------------WDGIKTAWRLTPA 224
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L+R L WRD AR D +L D+ + +LA P + V
Sbjct: 225 GLTLLRLLFIWRDGQARKEDVPKGQILKDRTLWSLAKTLPTHHKAV 270
>gi|395798789|ref|ZP_10478072.1| ribonuclease D [Pseudomonas sp. Ag1]
gi|395337023|gb|EJF68881.1| ribonuclease D [Pseudomonas sp. Ag1]
Length = 377
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGARAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYTRLRPKLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|171910647|ref|ZP_02926117.1| ribonuclease D, putative [Verrucomicrobium spinosum DSM 4136]
Length = 381
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 109 FVWVETKSQLNELANALSKEFFFA------VDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+ W++T+ QL LA L+ +DTE SL F LIQ++ L+D
Sbjct: 14 YYWIDTEEQLRGLAADLNSLITRGELTRVYLDTEADSLHHFQEKLCLIQLAANGIYALID 73
Query: 163 TIALHDEISILQPFFADPGVCKV-FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ 221
+ L D L P +V FH +D D+ L+R + +L DT A +
Sbjct: 74 PLVLSD----LGPLLEVVDNAEVWFHSADYDLTLLKRTCNWTPTHLKDTQVAARLTGHRT 129
Query: 222 KSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
LA L+E +CGV K Q+EDW RPLPA+M YA D YL + + +L
Sbjct: 130 FGLAALVEQHCGVTLCKSSQKEDWSLRPLPAKMQAYAVDDVRYLGRLVDIFMTDL 184
>gi|398958756|ref|ZP_10677721.1| ribonuclease D [Pseudomonas sp. GM33]
gi|398145975|gb|EJM34744.1| ribonuclease D [Pseudomonas sp. GM33]
Length = 377
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + F A+DTE + +F L+Q+ K YL+D + + D
Sbjct: 7 WIRDNDSLGRFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVLKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +EI+ Y A + ++L Q V +R
Sbjct: 175 EKYAWVLE----DGAELVANLRREIDPYEVYRDA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREKEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|423690595|ref|ZP_17665115.1| ribonuclease D [Pseudomonas fluorescens SS101]
gi|388002106|gb|EIK63435.1| ribonuclease D [Pseudomonas fluorescens SS101]
Length = 377
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYTRLRPQLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+EI+ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREIDPYELYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|381393851|ref|ZP_09919569.1| ribonuclease D [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330123|dbj|GAB54702.1| ribonuclease D [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 403
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 36/303 (11%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
++ +++V+T +QL +L S + A+DTE ++ LIQ+ + + L+D +
Sbjct: 6 KTYEYLYVDTPAQLTQLCAHYSTQEVLAIDTEFVRTQTLTPILGLIQVFDKHQVALIDPV 65
Query: 165 ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKS 223
A+ D +S +P + KV H D+ L HI LFDT A +L
Sbjct: 66 AIKD-LSEFSSILTNPNIVKVAHACSEDLEALWHHLHIIPTPLFDTQFAAAMLGLGVSVG 124
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
A L+E + +K R DW QRPL + YA D +L+ + + + E +
Sbjct: 125 YANLVENLFEITVDKGESRTDWIQRPLSSAQCAYASADVTHLMALYEHIYKETQIL---- 180
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
K ++VL+ Q+ K+ P E A ++ L N +
Sbjct: 181 -----QKTDWVLDEIH-------QLGLKKSIPLPTEIA----YYSLKNNW----KLKGKQ 220
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLN 403
++ L WR +AR + ++ FV+ + A+ +A+K P ++ DC N
Sbjct: 221 LSALKELAKWRLEVARKENMAVNFVIKEIALFEIASKVPETPQALF----------DCHN 270
Query: 404 LSS 406
L S
Sbjct: 271 LYS 273
>gi|418583147|ref|ZP_13147217.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P1]
gi|375047367|gb|EHS39913.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P1]
Length = 376
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 10 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 68
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 69 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 127
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L L ++ + ++ +
Sbjct: 128 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEE--KRAWLLE 185
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 186 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 221
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 222 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 262
>gi|418594535|ref|ZP_13158323.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P2]
gi|375043331|gb|EHS35959.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P2]
Length = 393
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + +F L+Q+ ++++L+D + + D
Sbjct: 27 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQD-W 85
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 86 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 144
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L L ++ + ++ +
Sbjct: 145 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEE--KRAWLLE 202
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 203 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 238
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 239 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 279
>gi|182412681|ref|YP_001817747.1| 3'-5' exonuclease [Opitutus terrae PB90-1]
gi|177839895|gb|ACB74147.1| 3'-5' exonuclease [Opitutus terrae PB90-1]
Length = 391
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
R +V ++ QL L AL + A+DTE ++ + L+Q +E +LVD +
Sbjct: 21 RPPEYVLIDQPGQLAPLLAALDRVDEVALDTEADNMFHYRTRVCLLQFLVGREIFLVDVL 80
Query: 165 ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 224
A L A+ + + HGSD D+ L ++FDT A +++++P+ L
Sbjct: 81 A-PLPFEGLWARLAEKNL--IMHGSDFDLRLLHDFCRFRPKSIFDTMLAAQLINRPRIGL 137
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
A LLE + GV +K Q+ +W +RPL +ML YA D +L + L EL + G
Sbjct: 138 ASLLEDHFGVKLSKESQKANWSKRPLTKKMLDYAALDVFHLPALRDILTRELTKLGR 194
>gi|398993941|ref|ZP_10696872.1| ribonuclease D [Pseudomonas sp. GM21]
gi|398133446|gb|EJM22646.1| ribonuclease D [Pseudomonas sp. GM21]
Length = 377
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|340776383|ref|ZP_08696326.1| ribonuclease D [Acetobacter aceti NBRC 14818]
Length = 408
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ + + L E L E F VDTE +++ L+QI+ EKE L+D +A +++
Sbjct: 15 ITSTTDLAETVERLRNETFVTVDTEFMREKTYWPELCLLQIAGEKEVVLIDAVAPDIDLT 74
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L F D V KVFH + D+ F LFDT A V Q L+
Sbjct: 75 PLTALFDDQSVVKVFHAARQDLEIFLHLFDRLPQPLFDTQVAAMVAGYGDQVGYDNLVGA 134
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
G + +K + DW RPL L YA D YL + + L+ +L+++G
Sbjct: 135 VTGASIDKSHRFTDWSVRPLSPAQLTYAAADVTYLRLVYESLLKQLEREG 184
>gi|395500119|ref|ZP_10431698.1| ribonuclease D [Pseudomonas sp. PAMC 25886]
gi|421139416|ref|ZP_15599455.1| Ribonuclease D [Pseudomonas fluorescens BBc6R8]
gi|404509332|gb|EKA23263.1| Ribonuclease D [Pseudomonas fluorescens BBc6R8]
Length = 377
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYTRLRPKLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|431928090|ref|YP_007241124.1| ribonuclease D [Pseudomonas stutzeri RCH2]
gi|431826377|gb|AGA87494.1| ribonuclease D [Pseudomonas stutzeri RCH2]
Length = 374
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 113/274 (41%), Gaps = 29/274 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV L L + + AVDTE + +F L+Q+ + YL+D +A+HD
Sbjct: 7 WVLDDEHLTHLCAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLAVHD-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 SAFAAVLQDNAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL +QYA DA +L + + L+ +L + ++ ++ +
Sbjct: 125 QAVLGIELPKGETRSDWLQRPLSDMQVQYAAEDAQHLAELYEALLPKLSE--DKRAWVLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D V R S+ E+Y A +RL Q V +
Sbjct: 183 DGAELVANLQRESDPE---------EAYREVKQA----WRLKPQQLAVLKV--------- 220
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L AWR+ AR ++ VL + ++ LA P
Sbjct: 221 -LTAWRERQARARNQPRNRVLREASLWPLARTQP 253
>gi|153000417|ref|YP_001366098.1| ribonuclease D [Shewanella baltica OS185]
gi|160875014|ref|YP_001554330.1| ribonuclease D [Shewanella baltica OS195]
gi|217973594|ref|YP_002358345.1| ribonuclease D [Shewanella baltica OS223]
gi|378708257|ref|YP_005273151.1| ribonuclease D [Shewanella baltica OS678]
gi|418024903|ref|ZP_12663884.1| ribonuclease D [Shewanella baltica OS625]
gi|151365035|gb|ABS08035.1| ribonuclease D [Shewanella baltica OS185]
gi|160860536|gb|ABX49070.1| ribonuclease D [Shewanella baltica OS195]
gi|217498729|gb|ACK46922.1| ribonuclease D [Shewanella baltica OS223]
gi|315267246|gb|ADT94099.1| ribonuclease D [Shewanella baltica OS678]
gi|353535758|gb|EHC05319.1| ribonuclease D [Shewanella baltica OS625]
Length = 369
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 26/283 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +V ++ LN L + +DTE R++ LIQ K L+D +AL
Sbjct: 3 AFQYVSDEASLNALVAQYKQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALP 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAY 226
D ++ +DP + K+ H D+ LFD+ A + A
Sbjct: 63 D-LAQFWALLSDPNIIKLVHSCSEDLEVFAHYGKCQPTPLFDSQIAASLCGMGHGVGYAK 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ET G +K R DW +RPL L YA D YL + L A+L QG
Sbjct: 122 LVETCLGEVIDKGESRTDWIRRPLTEAQLSYAANDVLYLYQLYPQLEAKLSAQG------ 175
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++ E R + + + + ++ N ++ +
Sbjct: 176 ---RLAWLYEEGERMT-----------QGRLADPDLDTAYLKVKNA----FQLTEIQLAY 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ L WR A V D +L FV+ D +IALA K P + D++
Sbjct: 218 LKVLAKWRLEKALVRDLALGFVVKDHGLIALAKKQPKSSADLF 260
>gi|392420519|ref|YP_006457123.1| ribonuclease D [Pseudomonas stutzeri CCUG 29243]
gi|390982707|gb|AFM32700.1| ribonuclease D [Pseudomonas stutzeri CCUG 29243]
Length = 374
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 113/277 (40%), Gaps = 31/277 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV L L + + AVDTE + +F LIQ+ + YL+D +++ D
Sbjct: 7 WVLDDEHLTRLCAEWRQLPYVAVDTEFMRVDTFYPIAGLIQVGDGRRAYLIDPLSVRD-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S DP V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 SAFAALLQDPAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL ++YA DA +L + + L+ +L + ++ ++ +
Sbjct: 125 QAVLGIELPKGETRSDWLQRPLSDMQVRYAAEDAQHLAELYEALLPKLSE--DKRAWVLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA +RL Q V +
Sbjct: 183 DGAELVANLQR--------------ESDPDEAYRDVKQAWRLKPQQLAVLKV-------- 220
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L AWR+ AR ++ VL + ++ LA P +
Sbjct: 221 --LAAWRERQARARNQPRNRVLREASLWPLARTQPRD 255
>gi|170723061|ref|YP_001750749.1| ribonuclease D [Pseudomonas putida W619]
gi|169761064|gb|ACA74380.1| ribonuclease D [Pseudomonas putida W619]
Length = 377
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L EL F A+DTE + +F LIQI + YL+D + + D
Sbjct: 7 WIRDDQTLAELCQRWRTLPFVALDTEFMRVDTFYPKAGLIQIGDGERAYLIDPLLIVD-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLGELLEDAGVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L L D
Sbjct: 125 QEVLGLELPKGETRSDWLQRPLSDTQVSYAAEDAVHLAELFAALRPRLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E+E E + G+ ++ ++R
Sbjct: 175 DKYAWVLE----DGAELVAALRREVEP---ETLYRDVKLAWKLGRQQLA--------VLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D +L + ++ +A P N
Sbjct: 220 ELCAWREREARSRDVPRNRILKEHSLWPMAKNQPDN 255
>gi|146281747|ref|YP_001171900.1| ribonuclease D [Pseudomonas stutzeri A1501]
gi|145569952|gb|ABP79058.1| ribonuclease D [Pseudomonas stutzeri A1501]
Length = 401
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV + L L + F AVDTE + +F L+Q+ + YL+D +A+ D
Sbjct: 34 WVVDDAHLARLCAEWRQLPFVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLAVRD-- 91
Query: 171 SILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
PF D V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 92 --WHPFATLLDDAAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYS 148
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL ++YA DA +L + + L+ +L
Sbjct: 149 RLVQAVLGIELPKGETRSDWLQRPLSEMQVRYAAEDAQHLAELYEALLPKLS-------- 200
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQ 344
DDK +VLE V + ES P EA +RL Q V +
Sbjct: 201 --DDKRAWVLEDG------AELVANLQRESDPEEAYREVKQAWRLKPQQLAVLKV----- 247
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
L AWR+ AR ++ VL + ++ LA P + T+A+ D
Sbjct: 248 -----LTAWRERQARARNQPRNRVLREASLWPLARTQPCD----LVTLARID 290
>gi|126174091|ref|YP_001050240.1| ribonuclease D [Shewanella baltica OS155]
gi|386340851|ref|YP_006037217.1| ribonuclease D [Shewanella baltica OS117]
gi|125997296|gb|ABN61371.1| ribonuclease D [Shewanella baltica OS155]
gi|334863252|gb|AEH13723.1| ribonuclease D [Shewanella baltica OS117]
Length = 369
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 26/283 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +V ++ LN L + +DTE R++ LIQ K L+D +AL
Sbjct: 3 AFQYVSDEASLNALVAQYKQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALP 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAY 226
D ++ +DP + K+ H D+ LFD+ A + A
Sbjct: 63 D-LAQFWALLSDPNIVKLVHSCSEDLEVFAHYGKCQPTPLFDSQIAASLCGMGHGVGYAK 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ET G +K R DW +RPL L YA D YL + L A+L QG
Sbjct: 122 LVETCLGEVIDKGESRTDWIRRPLTEAQLSYAANDVLYLYQLYPQLEAKLSAQG------ 175
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++ E R L + + + ++ N ++ +
Sbjct: 176 ---RLAWLYEEGERMTLGRL-----------ADPDLDTAYLKVKNA----FQLTEIQLAY 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ L WR A V D +L FV+ D +IALA K P + D++
Sbjct: 218 LKVLAKWRLEKALVRDLALGFVVKDHGLIALAKKQPKSSADLF 260
>gi|408483085|ref|ZP_11189304.1| ribonuclease D [Pseudomonas sp. R81]
Length = 377
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVSAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSETQVSYAAEDAVHLAEVYTRLRPQLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|452749487|ref|ZP_21949248.1| ribonuclease D [Pseudomonas stutzeri NF13]
gi|452006600|gb|EMD98871.1| ribonuclease D [Pseudomonas stutzeri NF13]
Length = 374
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 113/277 (40%), Gaps = 31/277 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV L L + + AVDTE + +F LIQ+ + YL+D +++ D
Sbjct: 7 WVLDDEHLTRLCAEWRQLPYVAVDTEFMRVDTFYPIAGLIQVGDGRRAYLIDPLSVRD-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S DP V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 SSFAALLQDPAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL ++YA DA +L + + L+ +L + ++ ++ +
Sbjct: 125 QAVLGIELPKGETRSDWLQRPLSDMQVRYAAEDAQHLAELYEALLPKLSE--DKRAWVLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA +RL Q V +
Sbjct: 183 DGAELVTNLQR--------------ESDPNEAYRDVKQAWRLKPQQLAVLKV-------- 220
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L AWR+ AR ++ VL + ++ LA P +
Sbjct: 221 --LTAWRERQARARNQPRNRVLREASLWPLARTQPRD 255
>gi|349687992|ref|ZP_08899134.1| ribonuclease D [Gluconacetobacter oboediens 174Bp2]
Length = 395
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V V T ++L + L E F +DTE R++ L+Q++ EK+ ++DTIA +
Sbjct: 13 VLVTTTAELEAVTARLRHEPFVTIDTEFVRERTYWPELCLVQLAGEKDVVVIDTIAPGID 72
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L D V KVFH + D+ F LFDT A V Q L+
Sbjct: 73 LTSLGALLDDASVVKVFHAARQDLEIFLHLFDHLPAALFDTQVAAMVAGYGDQVGYDNLV 132
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ GV +K + DW RPL + YA D YL + + L+ +L+++G
Sbjct: 133 SSLLGVQIDKSHRFSDWAARPLSPAQIGYAAADVTYLRLVYEKLLVQLEREG 184
>gi|357496257|ref|XP_003618417.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355493432|gb|AES74635.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
Length = 90
Score = 76.6 bits (187), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 116 SQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQP 175
+QLN L + L + F +D E RS+L +L+QIS D +VDT+ LHD I ++
Sbjct: 6 NQLNSLIDILKNQKIFGLDLEHSKHRSYLRIVSLMQISFLNRDLIVDTLKLHDSIYQMKI 65
Query: 176 FFADPGVCKVFHGSDNDVMWLQR 198
F D +CKV HG ND++WL++
Sbjct: 66 IFEDVNICKVIHGGTNDILWLRK 88
>gi|167623763|ref|YP_001674057.1| ribonuclease D [Shewanella halifaxensis HAW-EB4]
gi|167353785|gb|ABZ76398.1| ribonuclease D [Shewanella halifaxensis HAW-EB4]
Length = 369
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 28/283 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F ++E + L L + +DTE R++ LIQ K L+D +A+ +
Sbjct: 4 FQYIEDDASLAALVEQYQEADLLVLDTEFVRTRTYYARLGLIQAYDGKTLALIDPLAVSN 63
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
+ + K+ H D+ R NLFD+ A L+ L Y
Sbjct: 64 -LELFWQLLNKESSVKLLHSCSEDLEVFARYGQCQPTNLFDSQIAAG-LAGMGHGLGYAK 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E V+ +K R DW +RPL L YA D +YL + LV +LK+QG
Sbjct: 122 LVEQTLEVSLDKGESRTDWLKRPLTEAQLNYAANDVYYLYKLYPQLVDKLKEQG------ 175
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++V E R L ++ + A F+L + Q V
Sbjct: 176 ---RLDWVYEEGVRMTQGRLDTPDPDLAYLKVKNA-----FQLTSNQLAV---------- 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
+R L WR A D +L FV+ D A+I LA K P D+Y
Sbjct: 218 LRDLAKWRMQRALQKDLALGFVVKDHALIGLAKKLPKTSNDLY 260
>gi|373949231|ref|ZP_09609192.1| ribonuclease D [Shewanella baltica OS183]
gi|386324929|ref|YP_006021046.1| ribonuclease D [Shewanella baltica BA175]
gi|333819074|gb|AEG11740.1| ribonuclease D [Shewanella baltica BA175]
gi|373885831|gb|EHQ14723.1| ribonuclease D [Shewanella baltica OS183]
Length = 369
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 113/283 (39%), Gaps = 26/283 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +V ++ LN L + +DTE R++ LIQ K L+D +AL
Sbjct: 3 AFQYVSDEASLNALVAQYKQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALP 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAY 226
D ++ +DP + K+ H D+ LFD+ A + A
Sbjct: 63 D-LAQFWALLSDPNIIKLVHSCSEDLEVFAHYGKCQPTPLFDSQIAASLCGMGHGVGYAK 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ET G +K R DW +RPL L YA D YL + L A+L QG
Sbjct: 122 LVETCLGEVIDKGESRTDWIRRPLTEAQLSYAANDVLYLYQLYPQLEAKLSVQG------ 175
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++ E R + + + + ++ N ++ +
Sbjct: 176 ---RLAWLYEEGERMT-----------QGRLADPDLDTAYLKVKNA----FQLTEIQLAY 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ L WR A V D +L FV+ D +IALA K P + D++
Sbjct: 218 LKVLAKWRLEKALVRDLALGFVVKDHGLIALAKKQPKSSADLF 260
>gi|88658362|ref|YP_507121.1| putative ribonuclease D [Ehrlichia chaffeensis str. Arkansas]
gi|88599819|gb|ABD45288.1| putative ribonuclease D [Ehrlichia chaffeensis str. Arkansas]
Length = 387
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 112 VETKSQLNELANALS--KEFFFAVDTE-QHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
++T +L L N L + F AVDTE S + LIQI+ KE +++D +A
Sbjct: 3 IDTVKELERLCNQLLVLQPKFIAVDTEFVRSSSEYYPKLCLIQIAYGKEQFVIDVLAKDM 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
++S+L F + + KVFH D+ L F +FDT A ++ Y
Sbjct: 63 DLSVLGHIFYNESIIKVFHDCRQDIDALLTKFPEIPSPIFDTQIAAMFCCCYDNAVGYSK 122
Query: 227 LLETYCGVATNKF-LQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E + G++ +K L+R +W RPL A+ +QYA D YL + + L L G +
Sbjct: 123 LVEQFLGISLDKLSLKRSNWALRPLSADKIQYALNDVIYLYELYQILYNNLLDAGKLPWF 182
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
++ N ++ N VC +I + + I
Sbjct: 183 L--EEMNNIVLQEVNCNDVC------DIPDFGSDMTKEEII------------------- 215
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+VR + WR+ +A+ + + F+L ++ +++L
Sbjct: 216 VVRSVIEWRERLAKFFNLNREFILKNKVMLSLV 248
>gi|398875377|ref|ZP_10630554.1| ribonuclease D [Pseudomonas sp. GM67]
gi|398886982|ref|ZP_10641816.1| ribonuclease D [Pseudomonas sp. GM60]
gi|398186628|gb|EJM73998.1| ribonuclease D [Pseudomonas sp. GM60]
gi|398208032|gb|EJM94773.1| ribonuclease D [Pseudomonas sp. GM67]
Length = 377
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 114/276 (41%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGRFCAEWQQLPYVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA L++A+ V +L+ + D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDA---LHLAEVFV-QLRPK------LSD 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREVDPYEVYREA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|339493381|ref|YP_004713674.1| ribonuclease D [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800753|gb|AEJ04585.1| ribonuclease D [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 374
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV + L L + F AVDTE + +F L+Q+ + YL+D +A+ D
Sbjct: 7 WVVDDAHLARLCAEWRQLPFVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLAVRD-- 64
Query: 171 SILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+PF D V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 65 --WRPFATLLDDAAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL ++YA DA +L + + L+ +L
Sbjct: 122 RLVQAVLGIELPKGETRSDWLQRPLSEMQVRYAAEDAQHLAELYEALLPKLS-------- 173
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQ 344
DDK +VLE V + ES P EA +RL Q V +
Sbjct: 174 --DDKRAWVLEDG------AELVANLQRESDPEEAYREVKQAWRLKPQQLAVLKV----- 220
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
L AWR+ AR ++ VL + ++ LA P + T+A+ D
Sbjct: 221 -----LTAWRERQARARNQPRNRVLREASLWPLARTQPRD----LVTLARID 263
>gi|399004514|ref|ZP_10707136.1| ribonuclease D [Pseudomonas sp. GM18]
gi|398119286|gb|EJM08988.1| ribonuclease D [Pseudomonas sp. GM18]
Length = 377
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 111/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGQFCTEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QDVLGIDLPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 EKYAWVLE----DGAELVANLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|379736670|ref|YP_005330176.1| ribonuclease D (modular protein) [Blastococcus saxobsidens DD2]
gi|378784477|emb|CCG04146.1| Ribonuclease D (modular protein) [Blastococcus saxobsidens DD2]
Length = 443
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 112 VETKSQLNELANAL-SKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY-LVDTIALHDE 169
+ET +QL E A AL + AVD E+ S + L+Q+ LVD + L D
Sbjct: 62 IETSTQLVEYAAALRAGTGPVAVDAERASGYRYGQKAYLVQLRRNGSGTGLVDPVPLPD- 120
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+S++Q AD V H ++ D+ L + + +FDT A + P+ L ++E
Sbjct: 121 LSVIQQAIAD--TEWVLHAANQDLPCLA-EIGLVPARIFDTELAARLAGLPRVGLGAVVE 177
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ G + K DW RPLP E L YA D L+ + L A L +QG +
Sbjct: 178 SLLGYSLQKGHSAADWSTRPLPEEWLVYAALDVEVLVDLRDALAAILGEQG--KTEWARQ 235
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
+F +L A G A +R +G G+ S + ++R
Sbjct: 236 EFEAILAA--------------------GPPAPKQDPWRRTSGVHGLRSRRQLG--MLRA 273
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ RD +AR D + VL D A++A P N
Sbjct: 274 IWEARDDLARRRDIAPGRVLPDSAMVAAVQADPKN 308
>gi|85712692|ref|ZP_01043738.1| Ribonuclease D [Idiomarina baltica OS145]
gi|85693542|gb|EAQ31494.1| Ribonuclease D [Idiomarina baltica OS145]
Length = 367
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 55/313 (17%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
FA+DTE +++ L+Q++ + E +++D + + +++ L ADP V V H
Sbjct: 15 FAIDTEFVRRKTYFANLGLVQLNVDGETFIIDPL-IDIDLTALWQLIADPDVVTVLHAGG 73
Query: 191 NDVMWLQRDFHIYVVN------LFDTAKACEVLSKPQKSLAY--LLE-TYCGVATNKFLQ 241
D+ + + N +FDT A + SL Y L+E + GV +K
Sbjct: 74 EDI-----ELFYHQSNGQKPRAVFDTQIAAGFIGMG-SSLGYASLVEQLFDGVTLDKSQS 127
Query: 242 REDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRS 301
R DW +RPL E L YA D YL + LV ++ Q + + + L+ S+R+
Sbjct: 128 RTDWLKRPLSEEQLTYAAADVSYLNSMYPWLVEQVAQAHVADIVVEESQ----LQVSKRT 183
Query: 302 NTV---CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMA 358
+ L ++ G ++ +++ L AWR A
Sbjct: 184 QVIPRHLLYLFV-----------------------GNAWQLNQKQLQVMKALAAWRLDKA 220
Query: 359 RVHDESLRFVLSDQAIIALANKAPANRTDVY--------TTIAQADSDVDCLNLSSSL-P 409
+ L F+ D ++ LA K P +++D+Y T ++ ++ + L+ ++ P
Sbjct: 221 MSENMPLGFIFKDGVLLELARKMPQSKSDLYKIKDLAPMTRKYSGEAIIEQIGLALAVDP 280
Query: 410 SPSPVVCSHLDDV 422
S P LDD+
Sbjct: 281 SQWPQTLQRLDDM 293
>gi|384485434|gb|EIE77614.1| hypothetical protein RO3G_02318 [Rhizopus delemar RA 99-880]
Length = 244
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 526 RKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVSCGEGNHYLR 585
+K ++WYL R LA +E P AI L FE KG G+ + I+ + N+CVSCG+ +H
Sbjct: 6 KKVVQWYLQRKLATTLESEPNAIKLNFEAKGDGHKAGD-YMIEERTNVCVSCGKMDHLTL 64
Query: 586 YRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFGIPLFIHKVA 645
+ ++P YR P +KS CH A KKQ++ F IPL
Sbjct: 65 HHVVPDMYRQWMPLVIKSKSQ---------CHTDYEVHATTLKKQLAKRFDIPLEGKGWV 115
Query: 646 D---SRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRRIVMRYY 702
D RKA R AA ALL +P +R+ L ++ ++
Sbjct: 116 DLPEHRKA----------------------RKAASALLKASDKIPKDRQLVLEMVIKNFW 153
>gi|53803525|ref|YP_114794.1| ribonuclease D [Methylococcus capsulatus str. Bath]
gi|53757286|gb|AAU91577.1| ribonuclease D [Methylococcus capsulatus str. Bath]
Length = 388
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 26/276 (9%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
++++ ++L ++ + AVDTE +++ L+QI+ + +D +A+ D +
Sbjct: 11 YIDSPAELAAFCRSIGGSPWIAVDTEFMRDKTYYPKFCLLQIANGTQAACIDPLAIED-L 69
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLE 229
++ + + KVFH + D+ F +FDT A ++ P Q A L+
Sbjct: 70 REVECLLFNRAITKVFHAARQDLEIFFHRFRAVPAPIFDTQLAAPLVGHPEQVGYASLVS 129
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
GV +K R DW QRPL A +YA D +L + + +L++ G D
Sbjct: 130 AMLGVTVDKEHTRTDWSQRPLSAAQKEYAANDVIHLAALYPRMREQLERLGRYAWLV--D 187
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
+F + E +Y E A I GG+ + L R
Sbjct: 188 EFAALEEPD---------LYVNRPED-----AWQRI--------GGLDRLKPEQFALAVR 225
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANR 385
L AWR+ A+ +D ++L D+A++ +A + P NR
Sbjct: 226 LAAWRENTAQQNDLPRNWILRDEALLEIALRRPRNR 261
>gi|386313555|ref|YP_006009720.1| ribonuclease D [Shewanella putrefaciens 200]
gi|319426180|gb|ADV54254.1| ribonuclease D [Shewanella putrefaciens 200]
Length = 369
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V + LN L + +DTE R++ LIQ K L+D +AL D
Sbjct: 4 FHYVSDEVSLNALVAQYQQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 63
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
++ L A+P + K+ H D+ V LFD+ A + A L
Sbjct: 64 -LAKLWALLANPNIIKLVHSCSEDLEVFAHYGQCQPVPLFDSQIAASLCGMGHGVGYAKL 122
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L A+L QG
Sbjct: 123 VETCLGEVIDKGESRTDWIRRPLTEAQLAYAANDVLYLHQLYPQLEAKLVAQG------- 175
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ N++ E R E + + ++ N ++ + +
Sbjct: 176 --RLNWLYEEGVRMT-----------EGRLDTPDLDTAYLKVKNA----FQLTEIQLAYL 218
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + T++
Sbjct: 219 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMTEL 259
>gi|440738701|ref|ZP_20918227.1| ribonuclease D [Pseudomonas fluorescens BRIP34879]
gi|447915829|ref|YP_007396397.1| ribonuclease D [Pseudomonas poae RE*1-1-14]
gi|440380806|gb|ELQ17363.1| ribonuclease D [Pseudomonas fluorescens BRIP34879]
gi|445199692|gb|AGE24901.1| ribonuclease D [Pseudomonas poae RE*1-1-14]
Length = 377
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSDTQVSYAAEDAVHLAEVYIRLRPQLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+EI+ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREIDPYELYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|407802045|ref|ZP_11148887.1| ribonuclease D [Alcanivorax sp. W11-5]
gi|407023720|gb|EKE35465.1| ribonuclease D [Alcanivorax sp. W11-5]
Length = 361
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 28/276 (10%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ W++ L + LS + +DTE R+F AL+Q++T +L+D AL
Sbjct: 2 TYRWIDRVDDLQDAMAGLSAQQPLYLDTEFMRERTFWPQLALVQVNTGDAIWLIDAPALA 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAY 226
D + L P A G V H D+ L V + DT A + Q S
Sbjct: 62 DPTT-LAPLCA--GHPLVMHACSEDIEALNVFTGAAPVAIEDTQIAAALCGHDLQCSYQR 118
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ G K R DW +RPL + L YA+ D +L +A+ L +L G
Sbjct: 119 LVRELTGTELPKDATRTDWLKRPLSPQQLAYARDDVVWLPELAERLREQLAGLGR----- 173
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ E R ++V QV P E A +R + G G + ++
Sbjct: 174 ---LVWWQEECQRLLDSVQAQV--------PAEDA-----WRQVKGAGHLQGVALAR--- 214
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+++L AWRD MAR D F++ D A++ALA + P
Sbjct: 215 LQQLAAWRDRMARERDLPRGFIIRDPALLALAQQPP 250
>gi|402701916|ref|ZP_10849895.1| ribonuclease D [Pseudomonas fragi A22]
Length = 377
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 123/309 (39%), Gaps = 37/309 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + F A+DTE + +F LIQI + YL+D + + D
Sbjct: 7 WIRDNDSLGQHCAEWQSLPFVALDTEFMRVDTFYPIAGLIQIGDGERAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLSDLLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL + YA DA +L + L L D
Sbjct: 125 KEVLDLDLPKGETRSDWLQRPLSETQISYAAEDALHLAEVYVLLRPRLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 EKYAWVLE----DGAELVANLRREVDPYEVYREAK-LAWKLSPAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT------DVYTTIAQADSD--VD 400
+CAWR+ AR D V+ + A+ LA P N D++ + D + +D
Sbjct: 220 EICAWREQQARARDLPRNRVVREHALWPLAKTQPDNLVALARIEDMHPRTVRQDGEFLLD 279
Query: 401 CLNLSSSLP 409
+ ++SLP
Sbjct: 280 MIKRAASLP 288
>gi|383458490|ref|YP_005372479.1| putative ribonuclease D [Corallococcus coralloides DSM 2259]
gi|380734173|gb|AFE10175.1| putative ribonuclease D [Corallococcus coralloides DSM 2259]
Length = 381
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 132 AVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDN 191
AVD E ++ +F +Q+ T+ + +L DT+ + +L P DP K FH +
Sbjct: 23 AVDLEADAMHAFRARLCFLQLGTDTDIFLFDTLQPGVDPRLLSPMMEDPARTKYFHAAQG 82
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ +L + + V LFDT +A +L P+ LA L GV K Q+ D+ RPLP
Sbjct: 83 DLQFLA-EAGVRVRGLFDTHRAVTLLGWPKVGLADLARERLGVELPKEHQQSDFSLRPLP 141
Query: 252 AEMLQYAQTDAHYLLYIAK 270
M Y D YL + +
Sbjct: 142 PGMRDYIANDVRYLCELGR 160
>gi|386020022|ref|YP_005938046.1| ribonuclease D [Pseudomonas stutzeri DSM 4166]
gi|327479994|gb|AEA83304.1| ribonuclease D [Pseudomonas stutzeri DSM 4166]
Length = 374
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV + L L + F AVDTE + +F L+Q+ + YL+D +A+ D
Sbjct: 7 WVVDDAHLARLCAEWRQLPFVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLAVRD-- 64
Query: 171 SILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
PF D V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 65 --WHPFATLLDDAAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL ++YA DA +L + + L+ +L
Sbjct: 122 RLVQAVLGIELPKGETRSDWLQRPLSEMQVRYAAEDAQHLAELYEALLPKLS-------- 173
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQ 344
DDK +VLE V + ES P EA +RL Q V +
Sbjct: 174 --DDKRAWVLEDGAEL------VANLQRESDPEEAYREVKQAWRLKPQQLAVLKV----- 220
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
L AWR+ AR ++ VL + ++ LA P + T+A+ D
Sbjct: 221 -----LTAWRERQARARNQPRNRVLREASLWPLARTQPCD----LVTLARID 263
>gi|397670259|ref|YP_006511794.1| putative ribonuclease D [Propionibacterium propionicum F0230a]
gi|395143550|gb|AFN47657.1| putative ribonuclease D [Propionibacterium propionicum F0230a]
Length = 403
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 114/274 (41%), Gaps = 31/274 (11%)
Query: 112 VETKSQLNELANALSKEFF-FAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDE 169
V+T L+ ++LS A D E+ + L QI E +L+D IAL D
Sbjct: 16 VDTPETLDACLDSLSHGTGPVAFDAERAHGHRYWPKAYLFQIRREGAGTWLIDPIALEDG 75
Query: 170 ISILQPFFADPGVCK----VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
+ D C + H + D+ D I LFDT A +L P LA
Sbjct: 76 AEVRLGGLVD--ACSDALWIIHAASQDLP-CMLDVGIRPPALFDTELAGRLLGAPSVGLA 132
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
LLET G+ K ++W RPLP L YA D YL+ +A L EL GN ++
Sbjct: 133 ALLETKLGIRLRKAHSADNWATRPLPTSWLIYAALDVDYLIELADLLRTELV-AGNRIAW 191
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+++F ++T + S P A +R L+G G+ +
Sbjct: 192 A-EEEF----------------IHTLRVFSTP--PAPRREPWRRLSGIQGLKHPRQLA-- 230
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
+ R L RDL+AR D +L+D AII A+
Sbjct: 231 VARALWQERDLVARRRDRPPSRILADAAIIEFAS 264
>gi|254234416|ref|ZP_04927739.1| ribonuclease D [Pseudomonas aeruginosa C3719]
gi|126166347|gb|EAZ51858.1| ribonuclease D [Pseudomonas aeruginosa C3719]
Length = 374
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 31/281 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L + + + A+DTE + + L+Q+ ++++L+D + + D
Sbjct: 8 WIRDDASLAQQCREWRTQPYLALDTEFMRVDTSYPAAGLVQVGDGRQEWLIDPLLIQD-W 66
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
S D V KV H D+ R V LFDT A L S+ Y L+
Sbjct: 67 SPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAH-SMGYSKLV 125
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL ++YA D +L + L A L ++ + ++ +
Sbjct: 126 KEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEE--KRAWLLE 183
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLV 347
D V R ES P EA + +RL Q V +
Sbjct: 184 DGAELVANLCR--------------ESDPREAYREVKLGWRLRPQQLAV----------L 219
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
R LCAWR+ AR+ + VL ++ + LA P N+TD+
Sbjct: 220 RELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDL 260
>gi|70925113|ref|XP_735299.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508837|emb|CAH86321.1| hypothetical protein PC301947.00.0 [Plasmodium chabaudi chabaudi]
Length = 237
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 142 SFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFH 201
S+ GFT+LI I T+ DY++D + ++I +L DP + K+ + S+N +++ Q+DF
Sbjct: 91 SYHGFTSLILIGTKDVDYIIDVFNMFEDIYLLNEITTDPKILKITYNSENLILFFQKDFS 150
Query: 202 IYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTD 261
IY +N D L+ + S+ YL+ Y V RPL +E +Q +T
Sbjct: 151 IYFINTIDLLLCANCLNI-KNSIPYLVFNYFNVNIGLTSITSVSLDRPLISEAIQIFKTH 209
Query: 262 AHYLLYIAKCLVAEL 276
+HYL ++ ++ +L
Sbjct: 210 SHYLYHLFDYVITDL 224
>gi|312959586|ref|ZP_07774103.1| ribonuclease D [Pseudomonas fluorescens WH6]
gi|311286303|gb|EFQ64867.1| ribonuclease D [Pseudomonas fluorescens WH6]
Length = 377
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPSVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L +L DDK+ +VLE +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYTRLRPKLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|419956034|ref|ZP_14472150.1| ribonuclease D [Pseudomonas stutzeri TS44]
gi|387967148|gb|EIK51457.1| ribonuclease D [Pseudomonas stutzeri TS44]
Length = 405
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 142/355 (40%), Gaps = 58/355 (16%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV + L L + F A+DTE + +F L+Q+ + YL+D +A+ D
Sbjct: 37 WVLDDAHLARLCAEWRQLPFVALDTEFMRVDTFYPIAGLVQVGDGRCAYLIDPLAVKD-- 94
Query: 171 SILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
QPF D V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 95 --WQPFAGLLQDSAVVKVLHACGEDLEVLSRLTGQLPAPLFDTQLAGGYLNL-GFSMGYS 151
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ G+ K R DW QRPL ++YA D +L + L+ L
Sbjct: 152 RLVQAVLGLDLPKDETRSDWLQRPLSEMQVRYAAQDVQHLAELYAALLPRLS-------- 203
Query: 286 CPDDKFNFVLEASRRSNTVC-LQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
DDK +V+E + V LQ T E+Y A +RL Q V
Sbjct: 204 --DDKRRWVMEDG--AELVANLQRETDPDEAYREVKQA----WRLRPQQLAV-------- 247
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP------ANRTDVYTTIAQADSD 398
+R L AWR+ ARV ++ +L + ++ LA P A D++ + D +
Sbjct: 248 --LRALAAWRERQARVRNQPRNRILREASLWPLARTQPKDLVALARIDDMHPRTVRQDGE 305
Query: 399 -----------VDCLNLSSSLPSPSPV----VCSHLDDVERQVCNNVENLDDILL 438
+ + ++LP P P+ V L V ++ ++ +I+L
Sbjct: 306 TLLELIRQAAALPAQDWPAALPEPLPLEVSAVLKKLRAVGQRTAKELDITPEIML 360
>gi|398839457|ref|ZP_10596704.1| ribonuclease D [Pseudomonas sp. GM102]
gi|398906633|ref|ZP_10653534.1| ribonuclease D [Pseudomonas sp. GM50]
gi|398112791|gb|EJM02645.1| ribonuclease D [Pseudomonas sp. GM102]
gi|398172749|gb|EJM60605.1| ribonuclease D [Pseudomonas sp. GM50]
Length = 377
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA L++A+ V +L+ + D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSDTQISYAAEDA---LHLAEVFV-QLRPK------LSD 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +E++ Y A + ++L Q V +R
Sbjct: 175 EKYAWVLE----DGAELVANLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREREARARDLPRNRIVREHSLWPLARTQPDN 255
>gi|300723126|ref|YP_003712424.1| ribonuclease D [Xenorhabdus nematophila ATCC 19061]
gi|297629641|emb|CBJ90244.1| RNase D, processes tRNA precursor [Xenorhabdus nematophila ATCC
19061]
Length = 379
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 109/277 (39%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V T +QL + K A+DTE R++ LIQ+ ++ L+D + EIS
Sbjct: 9 VTTDAQLQSVCEQAKKHARIALDTEFVRTRTYYPQLGLIQLFDGEQLSLIDPL----EIS 64
Query: 172 ILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
QP DP V K+ H D+ F + DT + P A L
Sbjct: 65 QWQPLKALLVDPDVLKLIHAGSEDLEVFGNSFQCLPTPMIDTQVLAAFIGHPISCGFATL 124
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ Y V +K R DW RPL + +YA D +YLL +A L+ + +Q G Y
Sbjct: 125 VAEYLHVELDKSESRTDWLARPLSRKQCEYAAADVYYLLPLADILLKKTEQAG----YFD 180
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
K L A RR V + K+I G + +
Sbjct: 181 AAKDESDLIAQRRKEIVVPECAYKDI--------------------GNAWQLRPKQLACL 220
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++L AWR AR D ++ FV+ ++ + +A P +
Sbjct: 221 KKLAAWRLNQARERDLAVNFVIREENLWQVARYMPTS 257
>gi|349700964|ref|ZP_08902593.1| ribonuclease D [Gluconacetobacter europaeus LMG 18494]
Length = 395
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V V T ++L + L E F +DTE R++ L+Q++ EK+ ++DT A +
Sbjct: 13 VLVTTTAELEAVTARLRHEPFVTIDTEFVRERTYWPELCLVQLAGEKDVVVIDTTAPGID 72
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L D V KVFH + D+ F LFDT A V Q L+
Sbjct: 73 LSPLGALLDDASVVKVFHAARQDLEIFLHLFDRLPAALFDTQVAAMVAGYGDQVGYDNLV 132
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ GV +K + DW RPL + YA D YL + + L+ +L+++G
Sbjct: 133 SSLLGVQIDKSHRFSDWAARPLSPAQIGYAAADVTYLRLVYEKLLVQLEREG 184
>gi|269959116|ref|YP_003328905.1| ribonuclease D [Anaplasma centrale str. Israel]
gi|269848947|gb|ACZ49591.1| ribonuclease D [Anaplasma centrale str. Israel]
Length = 389
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 131 FAVDTEQHSLRSFLGF---TALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFH 187
AVDTE +RSF + L+Q++ + +VD + ++S LQ F D G+CKVFH
Sbjct: 28 LAVDTE--FVRSFNDYYPRLCLLQMAYQGGQCVVDVLDERLDLSPLQEIFDDEGICKVFH 85
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFL-QRED 244
D+ L + F +FDT A + S+ Y L+E + GV NK L +R D
Sbjct: 86 DCRQDLDALSQRFLRLPKPIFDTQTASMLCEYHDNSVGYSKLVEQFLGVKLNKLLFKRVD 145
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
W RPL ++YA D YL + L+ L +G
Sbjct: 146 WSHRPLSEGKVRYALDDVTYLHELYGVLLDILVAKGR----------------------- 182
Query: 305 CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDES 364
L + +E+ G A+ + LL G S + + R + WR+ +AR+ + +
Sbjct: 183 -LTWFREEMAGIAG--ASVDNYDSLLEGMDFFSELGEAEAIVARSIIEWREKIARLFNVN 239
Query: 365 LRFVLSDQAIIALANKAPANR 385
V++ ++++ NR
Sbjct: 240 RNIVMNSKSVLCATQAFLRNR 260
>gi|239791657|dbj|BAH72266.1| ACYPI000909 [Acyrthosiphon pisum]
Length = 249
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 517 DGRLLCYCDRKKLEWYLTRDLAKLVEDNPPAIMLLFEPKGRPEDEGNEFYIQSKKNICVS 576
DG ++ C KK++WY+++ LA+LV + P I L F + + + F + ++NIC
Sbjct: 5 DGTVMSTCSHKKVDWYISQGLAELVNNEPKTIRLNFSADLK--NRKDNFSVLPRENICTV 62
Query: 577 CGEGNHYLRYRIIPSCYRIHFPEQLKSHRSHDIVLLCVDCHEVAHAAAEKYKKQISAEFG 636
CG ++ + IIP + H P K+H HD +LLC CH ++A +K++
Sbjct: 63 CGRSEYFRKKSIIPKEFVRHMPTVHKTHIPHDTLLLCYWCHIKSNAFDFTIRKKLFNMCQ 122
Query: 637 IPLFIHKVADSRKAEARPGFSASITNFEAGVSPLQLRTAAMALLHHGPTMPSNRREELRR 696
I E P I A V ++ ++ A LL ++P ELR
Sbjct: 123 I------------KELNPNEYQKIP---AYVKIMRSKSLAKTLLKSRHSLPDKVANELRL 167
Query: 697 IVMRYYGGR 705
+ Y +
Sbjct: 168 EIAETYNMK 176
>gi|414071398|ref|ZP_11407368.1| ribonuclease D [Pseudoalteromonas sp. Bsw20308]
gi|410806239|gb|EKS12235.1| ribonuclease D [Pseudoalteromonas sp. Bsw20308]
Length = 376
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
+ET++QLN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IETQNQLNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KV H D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWQILK----DPTVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ G+ +K R +W QRPL + L YA D +LL K ++ +K
Sbjct: 122 VKELLGIEIDKSESRTNWLQRPLTTKQLDYAAADTFHLLPCFKLIIERIKAA-------- 173
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D F+ V+ S + K P E I + ++
Sbjct: 174 -DLFDIVINESEL-------IANKRAFQTPDELLYKDI--------KNAWQLKPHELAVL 217
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ L WR A + +L FVL + + +A + P++
Sbjct: 218 KELAVWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|217976404|ref|YP_002360551.1| ribonuclease D [Methylocella silvestris BL2]
gi|217501780|gb|ACK49189.1| ribonuclease D [Methylocella silvestris BL2]
Length = 405
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T L E+ L+ F VDTE +F ++Q+++ E VD +A +++
Sbjct: 10 ITTTEALAEVCQRLASHAFVTVDTEFLRETTFWPKLCVVQLASADEAVAVDALASGLDLA 69
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L ADP V KVFH + D+ + I LFDT A V Q S L++T
Sbjct: 70 PLFELMADPAVVKVFHAARQDLEIVWNLAKIIPAPLFDTQVAAMVCGFGDQVSYGDLVQT 129
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
C V+ +K + DW +RPL + YA D YL I L +LK+ G
Sbjct: 130 VCKVSLDKSSRFTDWSRRPLLPAQVDYAIADVTYLRDIYAILQDKLKETG 179
>gi|342179229|sp|B8EN54.2|RND_METSB RecName: Full=Ribonuclease D; Short=RNase D
Length = 399
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T L E+ L+ F VDTE +F ++Q+++ E VD +A +++
Sbjct: 4 ITTTEALAEVCQRLASHAFVTVDTEFLRETTFWPKLCVVQLASADEAVAVDALASGLDLA 63
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L ADP V KVFH + D+ + I LFDT A V Q S L++T
Sbjct: 64 PLFELMADPAVVKVFHAARQDLEIVWNLAKIIPAPLFDTQVAAMVCGFGDQVSYGDLVQT 123
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
C V+ +K + DW +RPL + YA D YL I L +LK+ G
Sbjct: 124 VCKVSLDKSSRFTDWSRRPLLPAQVDYAIADVTYLRDIYAILQDKLKETG 173
>gi|359452611|ref|ZP_09241954.1| ribonuclease D [Pseudoalteromonas sp. BSi20495]
gi|358050322|dbj|GAA78203.1| ribonuclease D [Pseudoalteromonas sp. BSi20495]
Length = 376
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
+ET++QLN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IETQNQLNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KV H D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWQILK----DPTVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ G+ +K R +W QRPL + L YA D +LL K ++ +K
Sbjct: 122 VKELLGIEIDKSESRTNWLQRPLTTKQLDYAAADTFHLLPCFKLIIERIKAA-------- 173
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D F+ V+ S + K P E I + ++
Sbjct: 174 -DLFDIVINESEL-------IANKRAFQTPDELLYKDI--------KNAWQLKPHELAVL 217
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ L WR A + +L FVL + + +A + P++
Sbjct: 218 KELAVWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|308049432|ref|YP_003912998.1| ribonuclease D [Ferrimonas balearica DSM 9799]
gi|307631622|gb|ADN75924.1| ribonuclease D [Ferrimonas balearica DSM 9799]
Length = 374
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 36/303 (11%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+Q + W++ L L ++ A+DTE R+ LIQ+ + L+D
Sbjct: 1 MQPMPQWQWIDNDDDLAALCRQCRQKDAVALDTEFVRTRTLHAQLGLIQLYDGETLALID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK 222
+ + D + L AD V KV H + D+ + LFDT + VL
Sbjct: 61 PLEIQD-LGPLWQLIADKNVVKVLHSASEDLEIFAYRGGVIPQPLFDT-QVAGVLLNLGG 118
Query: 223 SLAY--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
++ Y L+ Y G+ +K R DW +RPL + L YA D +YLL + + + +++ G
Sbjct: 119 AMGYGKLIHHYLGLELDKGEARTDWLKRPLSEKQLTYAAADVYYLLQVYRMMRPAIEEMG 178
Query: 281 NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSIS 340
+ +++ + R+ L+ P +A + ++ N +
Sbjct: 179 ---------RLDWLWQEGERACRGRLK------PDDPNKA-----YLKVKNAW----QLK 214
Query: 341 SVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVD 400
+++ L AWR +A D +L FV+ D A++ LA +AP R+ Y +++D
Sbjct: 215 PKQLAVLKALAAWRLGVAEQKDLALSFVVKDAALLNLARRAP--RSMAYL------ANMD 266
Query: 401 CLN 403
CL+
Sbjct: 267 CLH 269
>gi|157962268|ref|YP_001502302.1| ribonuclease D [Shewanella pealeana ATCC 700345]
gi|157847268|gb|ABV87767.1| ribonuclease D [Shewanella pealeana ATCC 700345]
Length = 369
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 119/284 (41%), Gaps = 28/284 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F ++E + L L +DTE R++ LIQ K L+D +A+
Sbjct: 3 AFQYIEDDASLAALVEQYQDADLLVLDTEFVRTRTYYARLGLIQAYDGKTLALIDPLAVS 62
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
+ + + + K+ H D+ R + NLFD+ A L+ L Y
Sbjct: 63 N-LELFWQLLSKESSVKLLHSCSEDLEVFARYGNCQPTNLFDSQIAAG-LAGMGHGLGYA 120
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E V+ +K R DW +RPL L YA D +YL + LV L++QG
Sbjct: 121 KLVEQTLEVSLDKGESRTDWLKRPLTEAQLNYAANDVYYLYKLYPQLVKLLEEQG----- 175
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+ ++V E R L T E E + + ++ N +SS
Sbjct: 176 ----RLDWVYEEGVRMTQGRLD--TPEPE---------TAYLKVKNA----FQLSSNQLA 216
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++R L WR A D +L FV+ D A+IALA K P + D++
Sbjct: 217 VLRDLSQWRLKRALQKDLALGFVVKDHALIALAKKQPKSTNDLF 260
>gi|330504002|ref|YP_004380871.1| ribonuclease D [Pseudomonas mendocina NK-01]
gi|328918288|gb|AEB59119.1| ribonuclease D [Pseudomonas mendocina NK-01]
Length = 377
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L E A F A+DTE + +F L+Q+S YL+D + I
Sbjct: 7 WILDDAGLAEHCAAWQALPFVALDTEFMRVDTFYPIAGLLQVSGGDGAYLIDPL----RI 62
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
S +PF A P V KV H D+ R LFDT A L+ S+ Y
Sbjct: 63 SDWRPFAALLEAPNVVKVLHSCSEDLEVFLRLSGSLPAPLFDTQLAAGYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ + K R DW QRPL ++YA D +L+ + + L+A L Q E +
Sbjct: 122 RLVQALLDIELPKGETRSDWLQRPLSELQVRYAAEDVLHLVEVYRALMARLAPQKVE--W 179
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+D V SR E P +A + +S Q
Sbjct: 180 VLEDGAELVANLSR--------------EVAPEDAWREAKL---------AWKLSRQQQA 216
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++R LCAWR+ AR ++ VL + ++ LA P N
Sbjct: 217 VLRALCAWREREARARNQPRNRVLREHSLWPLARTQPDN 255
>gi|398871648|ref|ZP_10626961.1| ribonuclease D [Pseudomonas sp. GM74]
gi|398205901|gb|EJM92679.1| ribonuclease D [Pseudomonas sp. GM74]
Length = 377
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L L + F A+DTE + +F L+QI L+D + + D
Sbjct: 7 WIRDNDSLGRLCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRACLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLATLLENPAVLKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +EI+ Y A + ++L Q V +R
Sbjct: 175 DKYAWVLE----DGAELVANLRREIDPYEVYRDA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREKEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|187735079|ref|YP_001877191.1| 3'-5' exonuclease [Akkermansia muciniphila ATCC BAA-835]
gi|187425131|gb|ACD04410.1| 3'-5' exonuclease [Akkermansia muciniphila ATCC BAA-835]
Length = 352
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
Query: 133 VDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVF-HGSDN 191
+D E SL + LIQ + E L+D +++ D + PF+ +V+ HG+D
Sbjct: 25 LDLEADSLHRYQEKICLIQYADETGSCLIDPLSIED----MGPFYNWLKETEVWMHGADY 80
Query: 192 DVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPLP 251
D+ Q + ++DT A +L Q LA L+E + G+ +K Q+ DW +RPL
Sbjct: 81 DMSLFQNAWETLPAMIWDTQTAARLLGFRQFGLAALVEHFHGITLSKSSQKADWARRPLS 140
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
M+ YA D +Y+L +A L A L+++G
Sbjct: 141 PTMVTYALNDVNYMLDMADKLTAALRKKG 169
>gi|388543349|ref|ZP_10146640.1| ribonuclease D [Pseudomonas sp. M47T1]
gi|388278661|gb|EIK98232.1| ribonuclease D [Pseudomonas sp. M47T1]
Length = 377
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 127/310 (40%), Gaps = 48/310 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
+ A+DTE + +F LIQI +L+D +++ + L DPGV KV H
Sbjct: 26 YVALDTEFMRVDTFYPIAGLIQIGDGACAWLIDPLSIK-QWQPLARLLEDPGVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLVRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + + L +L D+++ +VLE +
Sbjct: 144 RPLSDTQISYAAEDAVHLAEVYEKLRPQLS----------DERYTWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q GV +R LCAWR+ AR D
Sbjct: 190 QLRREVDPYELYRDA-KLAWKLSRQQLGV----------LRELCAWREREARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPANRT------DVYTTIAQADSDVDCLNL------------SSSLP 409
++ + ++ LA P N D++ + D ++ LNL +LP
Sbjct: 239 IVREHSLWPLARTQPDNLAALAKIEDMHPRTVRQDGEL-LLNLIKDAGSIAPEQWPQALP 297
Query: 410 SPSPVVCSHL 419
P P+ S +
Sbjct: 298 EPLPIEASGI 307
>gi|256822615|ref|YP_003146578.1| ribonuclease D [Kangiella koreensis DSM 16069]
gi|256796154|gb|ACV26810.1| ribonuclease D [Kangiella koreensis DSM 16069]
Length = 384
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 32/292 (10%)
Query: 104 QRSDSFVWVETKS---QLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYL 160
Q DS V VET S +L EL + AVDTE ++ ALIQI KE YL
Sbjct: 8 QHQDS-VHVETVSDPERLQELCQSWLALKELAVDTEFDRTNTYFHRLALIQIYDGKEIYL 66
Query: 161 VDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP 220
+D +A D++S L FA V K H D+ L + +FDT A L
Sbjct: 67 IDPLAF-DDLSALTELFASTSVVKALHSCSEDLEALYHQYGFEFNQVFDTQIAAS-LDGI 124
Query: 221 QKSLAY--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
S+ Y ++E + V +K + DW QRPL E YA D YL+ + L L +
Sbjct: 125 GLSVGYGNIVEHFLSVVLDKEHTKTDWLQRPLSQEQRVYAAQDVQYLMPVYYRLRDSLLE 184
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
+G C + N + A +++ E+Y A FRL
Sbjct: 185 KGLFE--CVIEDVNSIFAAIIQADDYA--------EAYLKVKGA----FRL--------- 221
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYT 390
+ + +++L WR+ +AR ++ FV D +I ++ K + D+ +
Sbjct: 222 -NQFQLNRLQKLAQWRETLARDNNIPKTFVFRDHHLIEVSQKEKTSIGDLLS 272
>gi|90020985|ref|YP_526812.1| ribonuclease D [Saccharophagus degradans 2-40]
gi|89950585|gb|ABD80600.1| ribonuclease D [Saccharophagus degradans 2-40]
Length = 386
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 26/273 (9%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ T +L E + AVDTE +++ LIQ++ + +YL+D + D+
Sbjct: 12 WISTVEELEECCERWQSKKLLAVDTEFMRSQTYYPIAGLIQVNDGEANYLLDPTTI-DDF 70
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLE 229
S D + K H D+ F LFDT A ++ A +++
Sbjct: 71 SPFAEILVDDDIIKAIHSCSEDLEVFYHSFGFLPQRLFDTQIAGAFVNLGYSMGFARMVQ 130
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
GV K R DW QRPL YA D YL +A L+ ELK + +
Sbjct: 131 GVLGVELPKTETRSDWLQRPLSVAQKHYAALDVEYLYLLAGKLLTELKAK---------E 181
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
+ ++V + T+ ++++ + R+ N + ++ Q+
Sbjct: 182 RLDWVFGEGK---TI--------VKNFSDNLDPKLSYLRVKNAWKLNAKQLAIFQN---- 226
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
LC WR+L A+ D+ ++ + + A+A K P
Sbjct: 227 LCEWRELTAQKRDKPRNRIVKENTLFAMALKRP 259
>gi|83645396|ref|YP_433831.1| ribonuclease D [Hahella chejuensis KCTC 2396]
gi|83633439|gb|ABC29406.1| ribonuclease D [Hahella chejuensis KCTC 2396]
Length = 398
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 108/273 (39%), Gaps = 26/273 (9%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W++T + L E L K + AVDTE +F AL+Q+ + YLVD + + D
Sbjct: 19 WIDTPAALQEALLRLEKTDWLAVDTEFIRGTTFYPAPALLQLYDRQCVYLVDMLKITD-W 77
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVL-SKPQKSLAYLLE 229
S + F + KV H D+ L DT A +L + + L L+
Sbjct: 78 SGVSRLFESRDILKVVHACSEDLELFNCVGLSQPCGLIDTQVANALLDGELNEGLQSLVR 137
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
G+ K R DW QRPL + +QYAQ D L + + L L+ G
Sbjct: 138 QNLGIELEKHATRSDWTQRPLTDKQIQYAQEDVVVLWPLYQKLAEALRLSG--------- 188
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
K+ LE E E+ AA R G + Q L+ +
Sbjct: 189 KYEIALE---------------EGEAMRLAAAGVQDMGRYYLKLRGGWRLRKGAQQLLAK 233
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L AWR+ AR D + + D +IA+A + P
Sbjct: 234 LAAWREQEARGRDIPRKKICPDDELIAIAQRRP 266
>gi|426408211|ref|YP_007028310.1| ribonuclease D [Pseudomonas sp. UW4]
gi|426266428|gb|AFY18505.1| ribonuclease D [Pseudomonas sp. UW4]
Length = 377
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 109/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + F A+DTE + +F L+Q+ + YL+D + + D
Sbjct: 7 WIRDNDSLGRFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGERAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVLKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L D
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPKLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+K+ +VLE + +EI+ Y A + +S ++R
Sbjct: 175 EKYAWVLE----DGAELVANLRREIDPYEVYRDAKLAW-----------KLSRAQLVVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREKEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|68171541|ref|ZP_00544920.1| 3'-5' exonuclease [Ehrlichia chaffeensis str. Sapulpa]
gi|67999046|gb|EAM85718.1| 3'-5' exonuclease [Ehrlichia chaffeensis str. Sapulpa]
Length = 387
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 33/273 (12%)
Query: 112 VETKSQLNELANALS--KEFFFAVDTE-QHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
++T +L L N L + F AVDTE S + LIQI+ KE +++D +A
Sbjct: 3 IDTVKELERLCNQLLVLQPKFIAVDTEFVRSSSEYYPKLCLIQIAYGKEQFVIDVLAKDM 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
++S+L F + + KVFH D+ L F +FDT A ++ Y
Sbjct: 63 DLSVLGHIFYNESIIKVFHDCRQDIDALLTKFPEIPSPIFDTQIAAMFCCCYDNAVGYSK 122
Query: 227 LLETYCGVATNKF-LQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+E + G++ +K L+R +W RPL A+ +QYA D YL + + L L G
Sbjct: 123 LVEQFLGISLDKLSLKRSNWALRPLSADKIQYALNDVIYLYELYQILYNNLLDAG----- 177
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
K + LE +N V +V ++ P S ++
Sbjct: 178 ----KLPWFLE--EMNNIVLQEVNCNDVFDIPDFG----------------SDMTKEEII 215
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+VR + WR+ +A+ + + F+L ++ +++L
Sbjct: 216 VVRSVIEWRERLAKFFNLNREFILKNKVMLSLV 248
>gi|399521199|ref|ZP_10761939.1| unnamed protein product [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110437|emb|CCH38498.1| unnamed protein product [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 373
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 128/331 (38%), Gaps = 52/331 (15%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ + L A F A+DTE + +F L+Q+S + YL+D + + D
Sbjct: 7 WILDDASLARHCAAWQALPFVALDTEFMRVDTFYPIAGLLQVSAGEGAYLIDPLRIDD-- 64
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
QPF A P V KV H D+ R LFDT A L+ S+ Y
Sbjct: 65 --WQPFAALLEAPNVVKVLHSCSEDLEVFLRLTGSLPAPLFDTQLAAGYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ + K R DW QRPL ++YA D +L+ + + L+A L Q E +
Sbjct: 122 RLVQALLDIELPKGETRSDWLQRPLSELQVRYAAEDVLHLVEVYRALMARLAPQKVE--W 179
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+D V R E P +A + +S Q
Sbjct: 180 ILEDGAELVANLGR--------------EVAPEDAWRDAKL---------AWKLSRQQQA 216
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT------DVYT--------T 391
++R LCAWR+ AR ++ +L + ++ LA P N D++ T
Sbjct: 217 VLRALCAWREREARARNQPRNRILREHSLWPLARTQPDNLVALARIEDMHPKTVRQDGET 276
Query: 392 IAQADSDVDCL---NLSSSLPSPSPVVCSHL 419
+ Q D L +LP P P+ S L
Sbjct: 277 LLQLIHDAAALPPEQWPEALPEPLPIEASAL 307
>gi|347760629|ref|YP_004868190.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
gi|347579599|dbj|BAK83820.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
Length = 395
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V + T ++L + L E F +DTE R++ L+Q++ + + ++DT A +
Sbjct: 13 VLITTTAELEAVTTRLRGEPFVTIDTEFVRERTYWPELCLVQLAGKDDVVVIDTTAPGID 72
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+S L D GV KVFH + D+ F LFDT A V Q L+
Sbjct: 73 LSSLGELLDDAGVVKVFHAARQDLEIFLHLFDRLPAALFDTQVAAMVAGHGDQVGYDNLV 132
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ GV +K + DW RPL + YA D YL + L+ +L+Q+G
Sbjct: 133 WSLLGVQIDKSHRFSDWSARPLSPAQIGYAAADVTYLRLVYDKLLTQLQQEG 184
>gi|127513115|ref|YP_001094312.1| ribonuclease D [Shewanella loihica PV-4]
gi|126638410|gb|ABO24053.1| ribonuclease D [Shewanella loihica PV-4]
Length = 368
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 117/283 (41%), Gaps = 26/283 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
+F +VE + L EL + + +DTE R++ LIQ+ + L+D +A+
Sbjct: 2 TFQYVEDDASLTELVDKYRQAKVLMLDTEFVRTRTYYAKLGLIQVYDGETLALIDPVAVS 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAY 226
D +S + V H D+ L R LFD+ A A
Sbjct: 62 D-LSAFWALLERDDMISVLHSCSEDLEVLARYGRCQPKVLFDSQIAAAFCGWGHGMGYAK 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E GV +K R DW +RPL LQYA D YL + L+ +L++ G
Sbjct: 121 LVEHCLGVQLDKGESRTDWMKRPLSDAQLQYAANDVDYLYRLYPQLLEKLQESG------ 174
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ ++LE R +ES G+ A + ++ N +S
Sbjct: 175 ---RMPWLLEEGERMT-------QGRLESPDGDTA----YLKVKNA----FQLSPKQLAY 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++ L WR A D +L FV+ D A++ALA K P + +++
Sbjct: 217 LKVLAKWRLQKALDRDLALGFVIKDHALLALAKKQPKSTGEIF 259
>gi|120599067|ref|YP_963641.1| ribonuclease D [Shewanella sp. W3-18-1]
gi|120559160|gb|ABM25087.1| ribonuclease D [Shewanella sp. W3-18-1]
Length = 367
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V + LN L + +DTE R++ LIQ K L+D +AL D
Sbjct: 2 FHYVSDEVSLNALVAQYQQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 61
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
++ A+P + K+ H D+ V LFD+ A + A L
Sbjct: 62 -LAKFWALLANPNIIKLVHSCSEDLEVFAHYGQCQPVPLFDSQIAASLCGMGHGVGYAKL 120
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L A+L QG
Sbjct: 121 VETCLGEVIDKGESRTDWIRRPLTEAQLAYAANDVLYLHQLYPQLEAKLVAQG------- 173
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ N++ E R E ++ + ++ N ++ + +
Sbjct: 174 --RLNWLYEEGVRMT-----------EGRLDTPDLNTAYLKVKNA----FQLTEIQLAYL 216
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + T++
Sbjct: 217 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMTEL 257
>gi|114047748|ref|YP_738298.1| ribonuclease D [Shewanella sp. MR-7]
gi|113889190|gb|ABI43241.1| ribonuclease D [Shewanella sp. MR-7]
Length = 384
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 108/281 (38%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V ++ LN L + +DTE R++ LIQ K L+D +AL D
Sbjct: 19 FQYVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 78
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
+S +P + K+ H D+ LFD+ A + A L
Sbjct: 79 -LSAFWSLLDNPNIIKLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKL 137
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L +LK Q
Sbjct: 138 VETCLGEVIDKGESRTDWMRRPLTEAQLSYAANDVLYLYQLYPQLADKLKAQ-------- 189
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D+ ++ E R E + + R+ N ++ +
Sbjct: 190 -DRLGWLYEEGERMT-----------EGRLAPPDMDTAYLRVKNA----FQLTENQLAYL 233
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + +D+
Sbjct: 234 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMSDL 274
>gi|113970513|ref|YP_734306.1| ribonuclease D [Shewanella sp. MR-4]
gi|113885197|gb|ABI39249.1| ribonuclease D [Shewanella sp. MR-4]
Length = 384
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 108/281 (38%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V ++ LN L + +DTE R++ LIQ K L+D +AL D
Sbjct: 19 FQYVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 78
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
+S +P + K+ H D+ LFD+ A + A L
Sbjct: 79 -LSAFWSLLDNPNIIKLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKL 137
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L +LK Q
Sbjct: 138 VETCLGEVIDKGESRTDWMRRPLTEAQLSYAANDVLYLYQLYPQLADKLKAQ-------- 189
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D+ ++ E R E + + R+ N ++ +
Sbjct: 190 -DRLGWLYEEGERMT-----------EGRLAPPDMDTAYLRVKNA----FQLTENQLAYL 233
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + +D+
Sbjct: 234 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMSDL 274
>gi|398912875|ref|ZP_10656174.1| ribonuclease D [Pseudomonas sp. GM49]
gi|398181586|gb|EJM69141.1| ribonuclease D [Pseudomonas sp. GM49]
Length = 377
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L L + F A+DTE + +F L+QI YL+D + + D
Sbjct: 7 WIRDNDSLGRLCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGVRAYLIDPLTI-DNW 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L +P V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAALLENPAVVKVVHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L +L +
Sbjct: 125 QEVLGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVKLRPKLSAE--------- 175
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
K+ +VLE + +EI+ Y A + ++L Q V +R
Sbjct: 176 -KYAWVLE----DGAELVANLRREIDPYEVYRDA-KLAWKLSRAQLAV----------LR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D ++ + ++ LA P N
Sbjct: 220 ELCAWREQEARARDLPRNRIIREHSLWPLARTQPDN 255
>gi|388470220|ref|ZP_10144429.1| ribonuclease D [Pseudomonas synxantha BG33R]
gi|388006917|gb|EIK68183.1| ribonuclease D [Pseudomonas synxantha BG33R]
Length = 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 105/263 (39%), Gaps = 41/263 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGARAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPAPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLE------ASRRS 301
RPL + YA DA +L + L +L DDK+ +VLE A+ R
Sbjct: 144 RPLSETQVSYAAEDAVHLAEVYIRLRPQLS----------DDKYAWVLEDGAELVANLRR 193
Query: 302 NTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVH 361
+VY + + ++L Q V +R LCAWR+ AR
Sbjct: 194 EIDPFEVYRD-----------AKLAWKLSRAQLAV----------LRELCAWREQQARAR 232
Query: 362 DESLRFVLSDQAIIALANKAPAN 384
D ++ + ++ LA P N
Sbjct: 233 DLPRNRIIREHSLWPLAKSQPDN 255
>gi|213969693|ref|ZP_03397828.1| ribonuclease D [Pseudomonas syringae pv. tomato T1]
gi|301383544|ref|ZP_07231962.1| ribonuclease D [Pseudomonas syringae pv. tomato Max13]
gi|302062110|ref|ZP_07253651.1| ribonuclease D [Pseudomonas syringae pv. tomato K40]
gi|302130100|ref|ZP_07256090.1| ribonuclease D [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213925501|gb|EEB59061.1| ribonuclease D [Pseudomonas syringae pv. tomato T1]
Length = 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 46/304 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D + L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WAPLSALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSDTQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR++ AR +
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREVQARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN------------RT-----DVYTTIAQADSDVDCLNLSSSLPS 410
++ + ++ LA P N RT + + Q ++V +LP
Sbjct: 239 IIREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIQTAANVPAAEWPPALPE 298
Query: 411 PSPV 414
P P+
Sbjct: 299 PLPI 302
>gi|300717019|ref|YP_003741822.1| ribonuclease D [Erwinia billingiae Eb661]
gi|299062855|emb|CAX59975.1| Ribonuclease D [Erwinia billingiae Eb661]
Length = 373
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 26/278 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ + T L EL + A+DTE R++ LIQ+ + L+D + +
Sbjct: 2 NYTMITTNEALAELCLTARQFPALALDTEFVRTRTYYPGLGLIQMYDGENIALIDPLPI- 60
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAY 226
E + + D V K H D+ ++ + V + DT +P A
Sbjct: 61 TEWAPFRDLLLDEKVIKFLHAGSEDLEVFLHEYDVLPVPMIDTQILAAFTGRPLSCGFAT 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
++E++ G+A +K R DW RPL + QYA D YLL IA L+AE ++ G N+
Sbjct: 121 IVESFTGIALDKSESRTDWLARPLTEKQCQYAAADVFYLLPIAHKLLAEAEESGRINAAL 180
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ L RR V Q E+Y A + R L
Sbjct: 181 NECS----LLCQRRQMVVAPQ------EAYRDITNAWQLRPRQLAA-------------- 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R + AWR +AR D ++ FV+ ++ + +A P +
Sbjct: 217 LRLMAAWRLELAREKDMAVNFVVREENLWKVARYMPGS 254
>gi|148261351|ref|YP_001235478.1| ribonuclease D [Acidiphilium cryptum JF-5]
gi|342179221|sp|A5G127.1|RND_ACICJ RecName: Full=Ribonuclease D; Short=RNase D
gi|146403032|gb|ABQ31559.1| ribonuclease D [Acidiphilium cryptum JF-5]
Length = 392
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 29/286 (10%)
Query: 103 LQRSDSF---VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
++ S SF V +ET L L + L+ E F VDTE +++ ++Q+ +
Sbjct: 1 MKPSPSFPEPVLIETTEALAALCDRLAAEPFVTVDTEFMREKTYFPELCVVQLGGANDVA 60
Query: 160 LVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS- 218
++D A +++ L FA+P V KVFH D+ F LFDT A V
Sbjct: 61 VIDAQAEGLDLAPLGALFANPAVTKVFHACRQDIEIFLLKFGAVPAPLFDTQVAAMVAGF 120
Query: 219 KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
Q L+ + G +K + DW RPL + YA D +L + + L A L +
Sbjct: 121 GDQVGYDTLVSSLAGGRIDKAHRFSDWSARPLSRAQIAYAAADVTWLRPVYEGLRARLTR 180
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
+G + ++V E + V T E P +A +R L +GG
Sbjct: 181 EG---------RLDWVAEEA----AVLADPATYRTE--PEDA------WRRLKLRGG--- 216
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ LV+ + AWR+ A + + ++ D+ I LA APA+
Sbjct: 217 -NRRQLALVKAIAAWREREAMRVNVPRQRIVRDEQIPELAALAPAD 261
>gi|410089289|ref|ZP_11285915.1| ribonuclease D [Pseudomonas viridiflava UASWS0038]
gi|409763576|gb|EKN48536.1| ribonuclease D [Pseudomonas viridiflava UASWS0038]
Length = 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI +L+D + ++D + L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGSRAWLIDPLLIND-WTPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L D+KF ++LE +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFTILRPRLS----------DEKFAWLLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+EI+ Y A + ++L Q V +R LCAWR++ AR +
Sbjct: 190 NLRREIDPYEVYREAK-LAWKLSRAQLAV----------LRGLCAWREVQARARNVPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|24374123|ref|NP_718166.1| ribonuclease D Rnd [Shewanella oneidensis MR-1]
gi|24348616|gb|AAN55610.1| ribonuclease D Rnd [Shewanella oneidensis MR-1]
Length = 367
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V ++ LN L + +DTE R++ LIQ K L+D IAL D
Sbjct: 2 FQYVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPIALPD 61
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
+S +P + K+ H D+ LFD+ A + A L
Sbjct: 62 -LSAFWALLDNPNIIKLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKL 120
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L +L+ Q
Sbjct: 121 VETCLGEVIDKGESRTDWMRRPLTDAQLSYAANDVLYLYQLYPQLAEKLQTQ-------- 172
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D+ +++ E R E A + + ++ N ++ +
Sbjct: 173 -DRLDWLYEEGERMT-----------EGRLASPDAETAYLKVKNA----FQLTEHQLAYL 216
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + +D+
Sbjct: 217 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMSDL 257
>gi|28871074|ref|NP_793693.1| ribonuclease D [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854324|gb|AAO57388.1| ribonuclease D [Pseudomonas syringae pv. tomato str. DC3000]
Length = 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D + L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WAPLSALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSDTQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR++ AR +
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREVQARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN------------RT-----DVYTTIAQADSDVDCLNLSSSLPS 410
++ + ++ LA P N RT + + Q + V +LP
Sbjct: 239 IIREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIQTAASVPAAEWPPALPE 298
Query: 411 PSPV 414
P PV
Sbjct: 299 PLPV 302
>gi|334143457|ref|YP_004536613.1| ribonuclease D [Thioalkalimicrobium cyclicum ALM1]
gi|333964368|gb|AEG31134.1| ribonuclease D [Thioalkalimicrobium cyclicum ALM1]
Length = 388
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 28/274 (10%)
Query: 118 LNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDEISILQPF 176
LN L N L + + AVDTE +F A++QI+T D YL+D +++ + + L
Sbjct: 12 LNSLCNQLQQHKWLAVDTEFMRQDTFFAQLAMVQIATPTLDVYLIDPLSISN-LDNLWAL 70
Query: 177 FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLETYCGVA 235
A+ + KVFH + D+ L + +FDT A L Q A L+E C
Sbjct: 71 LANQTILKVFHAARQDLEVLYQQADRMPSPIFDTQLAGVFLGLGDQVGYARLVEELCQEK 130
Query: 236 TNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVL 295
NK R W RPL E L YA D +L ++ +L + L
Sbjct: 131 LNKDQARTPWLDRPLNPEQLAYAAADVWFLAQAYPKIIRQLSPTQRQ-----------AL 179
Query: 296 EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRD 355
EA + + E+ + A I F S +S L++ + AWR+
Sbjct: 180 EADFDA------ISNPELYRINPDQAWLRIKFS--------SGLSPKQSALLKHITAWRE 225
Query: 356 LMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
A ++ ++++SD AI+ LA + D+Y
Sbjct: 226 TQAVSSNQPRKWIISDDAILQLAKRPVREVQDLY 259
>gi|374299652|ref|YP_005051291.1| ribonuclease D [Desulfovibrio africanus str. Walvis Bay]
gi|332552588|gb|EGJ49632.1| ribonuclease D [Desulfovibrio africanus str. Walvis Bay]
Length = 409
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 26/280 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+ V++ L EL + L +DTE R++ LIQ+ + +LVD + + D+
Sbjct: 27 ILVQSAEALGELCSRLRGCDAVGMDTEFVRSRTYFPTLGLIQLVADGGVFLVDPLGV-DD 85
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLL 228
+S L ADP + K+FH D+ L +FDT A L Q L+
Sbjct: 86 LSPLVEILADPRLIKIFHSCQEDLEALYYLCGFAPGPVFDTQVAASFLGYGFQPGYGSLV 145
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ GV +K R +W +RPL L YA D YL + L L +QG S+ +
Sbjct: 146 KALFGVELDKDETRSNWIKRPLSESQLIYAAQDVRYLPAMYSILGQALTEQGR-LSWARE 204
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+ EA ++ C + + + + A+ +R
Sbjct: 205 ECAALEGEARFETDAACYYLRMRSLWQFDRRELAA-----------------------LR 241
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L AWR+ A D FVL D+++ A+ P D+
Sbjct: 242 DLSAWREHEAMSRDLPRSFVLDDKSLRAVVRDWPGKLADL 281
>gi|433631783|ref|YP_007265411.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070010]
gi|432163376|emb|CCK60784.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070010]
Length = 440
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 24/263 (9%)
Query: 131 FAVDTEQHSLRSFLGFTALIQIS-TEKEDYLVDTIA-LHDEISILQPFFADPGVCK-VFH 187
FAVD E+ S + G LIQI E L+D ++ D +++L P G + + H
Sbjct: 54 FAVDAERASGFRYSGRAYLIQIRRAEAGTVLIDPVSHGGDPLTVLAPVAEVLGTNEWILH 113
Query: 188 GSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQ 247
+D D+ L + + L+DT A + + +LA ++E G+ K DW +
Sbjct: 114 SADQDLPCLA-EVGMRPPALYDTELAGRLAGFDRVNLAAMVERLLGLGLTKGHGAADWSK 172
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPLP+ L YA D L+ + + L +QG N +F
Sbjct: 173 RPLPSAWLNYAALDVELLIELRAAISRVLAEQGKTNWAA--QEFE--------------- 215
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+ + ES P +AAA +R +G V + VR L RD +A+ D + R
Sbjct: 216 -HLRSFESRPPQAAARQDRWRRTSGIHKVQDRRGLAA--VRELWTARDRIAQRRDIAPRR 272
Query: 368 VLSDQAIIALANKAPANRTDVYT 390
+L D AII A P + D+
Sbjct: 273 ILPDSAIIDAAIADPKSVDDLVA 295
>gi|422299641|ref|ZP_16387202.1| ribonuclease D [Pseudomonas avellanae BPIC 631]
gi|407988396|gb|EKG30945.1| ribonuclease D [Pseudomonas avellanae BPIC 631]
Length = 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D + L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WAPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSDTQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR++ AR +
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREVQARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN------------RT-----DVYTTIAQADSDVDCLNLSSSLPS 410
++ + ++ LA P N RT + + Q ++V ++LP
Sbjct: 239 IVREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIQTAANVPAAEWPAALPE 298
Query: 411 PSPV 414
P P+
Sbjct: 299 PLPI 302
>gi|146292862|ref|YP_001183286.1| ribonuclease D [Shewanella putrefaciens CN-32]
gi|145564552|gb|ABP75487.1| ribonuclease D [Shewanella putrefaciens CN-32]
Length = 367
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 111/281 (39%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V + LN L + +DTE R++ LIQ K L+D +AL D
Sbjct: 2 FHYVSDEVSLNALVAQYQQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 61
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
++ A+P + K+ H D+ V LFD+ A + A L
Sbjct: 62 -LAKFWALLANPNIIKLVHSCSEDLEVFAHYGQCQPVPLFDSQIAASLCGMGHGVGYAKL 120
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L A+L QG
Sbjct: 121 VETCLGEVIDKGESRTDWIRRPLTEAQLAYAANDVLYLHQLYPQLEAKLVAQG------- 173
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ N++ E R E + + ++ N ++ + +
Sbjct: 174 --RLNWLYEEGVRMT-----------EGRLDTPDLDTAYLKVKNA----FQLTEIQLAYL 216
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + T++
Sbjct: 217 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMTEL 257
>gi|444911412|ref|ZP_21231587.1| Ribonuclease D [Cystobacter fuscus DSM 2262]
gi|444718170|gb|ELW58986.1| Ribonuclease D [Cystobacter fuscus DSM 2262]
Length = 388
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 110/259 (42%), Gaps = 31/259 (11%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
+VD E ++ SF +Q++T+ + +L DT+ S+L DP K FH +
Sbjct: 30 LSVDVETDAMHSFRARLCFLQLATDTDVFLFDTLQPGVHPSLLARVMEDPERTKFFHAAS 89
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ +L + + V LFDT +A +L P+ LA L GV K Q+ D+ RPL
Sbjct: 90 GDLPFLA-EAGVRVRGLFDTHRAATLLGWPKVGLADLARERLGVELPKEHQQSDFALRPL 148
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
P M Y D YL+ EL +Q E D +L+ R +C
Sbjct: 149 PPGMRDYIANDVRYLV--------ELGRQVREECRKADVLEEVLLDCQR----MC----- 191
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSS-----ISSVTQDLVRRLCAWRDLMARVHDESL 365
E + P A F+ +GG++ +++ Q L ++ W A + +
Sbjct: 192 DEAAARPDVGAE----FKPKLPKGGLTPAQLLLANTIAQALHKKRLEW----AEAENVPM 243
Query: 366 RFVLSDQAIIALANKAPAN 384
LS+ AI +A K P N
Sbjct: 244 GRTLSNMAITDIAIKPPGN 262
>gi|269215504|ref|ZP_06159358.1| ribonuclease D [Slackia exigua ATCC 700122]
gi|269130991|gb|EEZ62066.1| ribonuclease D [Slackia exigua ATCC 700122]
Length = 399
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ QL E A+DTE R + LIQ+ T++ +VD + +HD
Sbjct: 3 LYITDTKQLEEFVAFARTCDVVAIDTEFLRERCYWAKLCLIQLGTDERSVVVDPLKVHD- 61
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLL 228
+S L+ D V KVFH + D+ L + + +FDT A +L + Q L+
Sbjct: 62 LSPLRDLMVDTSVVKVFHAATQDLDILFHELDVMPDPIFDTQVAAALLGQTVQVGYGTLV 121
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
CGV K DW +RPL + + YA D YL I + L L+ G S+
Sbjct: 122 LNECGVRLKKADSFTDWARRPLSSSQINYALEDVVYLPRIYRQLTERLEALGRA-SWLEH 180
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D V + R + + K + G A + +
Sbjct: 181 DFAELVDPSRYRVDPENRWRHLKNVNQLSGRQLACA-----------------------K 217
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
+ AWR+ A + + VLSD I+ + + P + D++
Sbjct: 218 HVAAWRERKAMERNIPRKAVLSDVQIVEICRREPRSIDDMF 258
>gi|395215204|ref|ZP_10400856.1| 3'-5' exonuclease [Pontibacter sp. BAB1700]
gi|394455924|gb|EJF10318.1| 3'-5' exonuclease [Pontibacter sp. BAB1700]
Length = 395
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 36/259 (13%)
Query: 131 FAVDTEQHSLRSFLGFT-ALIQISTEKED-YLVDTIALHDEISILQPFFA---DPGVCKV 185
AVD E R GF LIQI+ K + +++D + D L PFF DP + K+
Sbjct: 35 LAVDLEFDQNRFTYGFNLCLIQIADGKGNCFIIDPFYIDD----LTPFFQLMEDPTITKI 90
Query: 186 FHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDW 245
H S+ND++ L + V + DT A ++L+ + SLA +L+ +K Q +W
Sbjct: 91 IHHSNNDILLLDK-MGCSVKGIVDTDVAAKILNYERSSLATVLKEEFDKEIDKSQQSSNW 149
Query: 246 RQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVC 305
+RPL + L+YA D YL I L+ E+++ D+ ++ E N +
Sbjct: 150 NKRPLTEDQLRYAAIDVIYLHKIKAKLLQEIEKL---------DRMHWFEE----ENHLL 196
Query: 306 LQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESL 365
Q+ E E+ P S +RL + Q L++ L A+R+ MAR ++
Sbjct: 197 EQLKYTESEN-PHLRLKHS--YRL----------NYYQQYLLKGLYAFRENMARQFNKPA 243
Query: 366 RFVLSDQAIIALANKAPAN 384
FV+ + A++ LAN A+
Sbjct: 244 HFVIPNDALVELANNPNAD 262
>gi|315123522|ref|YP_004065528.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas sp.
SM9913]
gi|315017282|gb|ADT70619.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas sp.
SM9913]
Length = 376
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 50/286 (17%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
++T+++LN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IQTQNELNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVYDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KV H D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWQILK----DPKVLKVLHSPSEDIEVFQKYAGFVPYPLFDTQFALQLLGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++T + +K R +W QRPL + L+YA D ++LL + ++ +K
Sbjct: 122 VKTLLNIEIDKSESRTNWLQRPLTQKQLEYAAADTYHLLPCFELIIDSIKAA-------- 173
Query: 288 DDKFNFV-----LEASRRSNTVCLQVYTKEIESY----PGEAAASSIFFRLLNGQGGVSS 338
D F+ V L A++R+ + ++ KEI++ P E A
Sbjct: 174 -DLFDIVINESELVANKRAFQIPDELLYKEIKNAWQLKPHELA----------------- 215
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+++ L WR A + +L FVL + + +A + P++
Sbjct: 216 -------VLKELAVWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|399154517|ref|ZP_10754584.1| Ribonuclease D [gamma proteobacterium SCGC AAA007-O20]
Length = 345
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 140/328 (42%), Gaps = 39/328 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T+ QL ++ + A+DTE + ++ L+QI+T +D +++ D
Sbjct: 2 IQTRPQLERYLKTINGDSRIAIDTEFKRVNTYYPKLCLVQIATSHFAECIDVLSIKD--- 58
Query: 172 ILQPFFADPGVCK---VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYL 227
L+P F K V H + D+ L +LFDT A +L+ P Q S L
Sbjct: 59 -LEPLFEKLYHNKTEWVVHSARQDIEALYHLSKRIPSSLFDTQIAASLLNYPLQISYQAL 117
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
E GV +K R DW RPLPA +++YA D YLL K L EL ++
Sbjct: 118 TEILQGVQLDKSFTRFDWTTRPLPANVVEYALDDVRYLLPNFKKLKHEL--IISKKIQWL 175
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D++ F+L+ ++Y IE ++ G+S + QD
Sbjct: 176 DEETRFLLD---------YKLYNPNIE-------------QICYKTKGLSRLGKKFQDRA 213
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALA---NKAPANRTDVYTTIAQADSDVDCLNL 404
+L WR+ A+ ++ ++++SD ++ A NK + Y + S + L+L
Sbjct: 214 IKLAVWREYNAQQKNKPRKWIMSDNKLLDYACGKNKLSTHSQKHYDDFVKESS--ETLSL 271
Query: 405 SSSLPSPSPVVCSHLDDVE--RQVCNNV 430
L P+ S + +++ NN+
Sbjct: 272 PELLTPQKPLTSSEKNKKNELQRIINNI 299
>gi|40063706|gb|AAR38487.1| ribonuclease D, putative [uncultured marine bacterium 583]
Length = 341
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 43/317 (13%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T SQL ++ + A+DTE + ++ L+QI+T +D ++++D
Sbjct: 2 IQTTSQLERYLKTINSDSRLAIDTEFKRINTYYPQLCLVQIATTHSLECIDVLSIND--- 58
Query: 172 ILQPFFADPGVCK---VFHGSDNDVMWLQRDFHI---YVVNLFDTAKACEVLSKP-QKSL 224
L+P F K + H + D+ + +H+ V+LFDT A +L+ P Q S
Sbjct: 59 -LEPLFEKLYRSKTEWIVHSARQDI---EAFYHLSKRIPVSLFDTQIAASLLNYPLQISY 114
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
+ E + +K R DW RPLPA++++YA D YLL + L EL ++
Sbjct: 115 QLITEVLQDIQLDKSFTRFDWTTRPLPADVVEYALDDVRYLLPNFEKLKHEL--TISKKI 172
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
D++ F+L+ +Y IE ++ G+S + Q
Sbjct: 173 QWLDEETRFLLDQD---------LYEPSIE-------------KICYKTKGLSQLGKKFQ 210
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALA---NKAPANRTDVYTTIAQADSDVDC 401
D +L AWR+ A+ ++ ++++SD+ ++ A NK ++ + S+
Sbjct: 211 DKAIKLAAWRENNAQQKNKPRKWIMSDEKLLDYACGKNKLSTRSEKLFDNFVKDTSET-- 268
Query: 402 LNLSSSLPSPSPVVCSH 418
LS L P+ S
Sbjct: 269 FTLSKMLTPQKPLTRSE 285
>gi|387771659|ref|ZP_10127817.1| ribonuclease D [Haemophilus parahaemolyticus HK385]
gi|386908519|gb|EIJ73212.1| ribonuclease D [Haemophilus parahaemolyticus HK385]
Length = 372
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+ S ++WVE + QL E+ + + A+DTE R+F LIQ+ K+ L+D
Sbjct: 1 MNSSIHYLWVENEQQLAEVCQSARQVPVVALDTEFIRERTFYPKLGLIQLFDGKQVSLID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQ 221
+ D S AD V KV H D+ + F+ L DT L+
Sbjct: 61 PTTIKD-FSPFVALLADQDVAKVLHACSEDLEVFECAFNQLPTPLVDTQVMATFLNLGTS 119
Query: 222 KSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
A L+ Y V +K R DW RPL LQYA D YLL I + + AEL Q
Sbjct: 120 VGFAKLVLHYLDVELDKGASRTDWLVRPLSETQLQYAAADVWYLLPIYQKMQAELAQTNW 179
Query: 282 ENS 284
+N+
Sbjct: 180 QNA 182
>gi|409397310|ref|ZP_11248230.1| ribonuclease D [Pseudomonas sp. Chol1]
gi|409398328|ref|ZP_11249142.1| ribonuclease D [Pseudomonas sp. Chol1]
gi|409117258|gb|EKM93693.1| ribonuclease D [Pseudomonas sp. Chol1]
gi|409118194|gb|EKM94598.1| ribonuclease D [Pseudomonas sp. Chol1]
Length = 405
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 148/381 (38%), Gaps = 63/381 (16%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV + L L + F A+DTE + +F L+QI + YL+D + + D
Sbjct: 37 WVLDDAHLARLCAEWRQLPFVALDTEFMRVDTFYPIAGLVQIGDGRCAYLIDPLTVKD-- 94
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
QPF A D V KV H D+ L R LFDT A L+ S+ Y
Sbjct: 95 --WQPFAALLQDTAVVKVLHACGEDLEVLSRLTGQLPAPLFDTQLAGGYLNL-GFSMGYS 151
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L+ G+ K R DW QRPL ++YA D +L + L+ L
Sbjct: 152 RLVHAVLGLDLPKDETRSDWLQRPLSEMQMRYAAEDVQHLAELYAALLPRLS-------- 203
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+DK +V+E LQ T E+Y A +RL Q V
Sbjct: 204 --EDKRRWVVEDG-AELVANLQRETDPDEAYREVKQA----WRLRPQQLAV--------- 247
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP------ANRTDVYTTIAQADSD- 398
+R L AWR+ AR ++ +L + ++ LA P A D++ + D +
Sbjct: 248 -LRVLTAWRERQARARNQPRNRILREASLWPLARTQPKDLVALARIEDMHPRTVRQDGET 306
Query: 399 ----------VDCLNLSSSLPSPSPV----VCSHLDDVERQVCNNVENLDDILLAN---- 440
+ ++LP P P+ V L V ++ N ++ +I+L
Sbjct: 307 LLELIRQAAALPAQEWPAALPEPLPLEAASVLKKLRAVGQRTANELDIAPEIMLRKKILE 366
Query: 441 -LQKCLGPNG--SCPLSVFNY 458
L K PNG S P S+ +
Sbjct: 367 ALLKSGYPNGPYSLPESLRGW 387
>gi|395648338|ref|ZP_10436188.1| ribonuclease D [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 377
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 118/290 (40%), Gaps = 37/290 (12%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L + DK+ +VLE +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYIRLRPRLSE----------DKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPANRT------DVYTTIAQADSD--VDCLNLSSSLP 409
++ + ++ LA P N D++ + D +D + ++SLP
Sbjct: 239 IVREHSLWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAASLP 288
>gi|149196457|ref|ZP_01873512.1| hypothetical protein LNTAR_14907 [Lentisphaera araneosa HTCC2155]
gi|149140718|gb|EDM29116.1| hypothetical protein LNTAR_14907 [Lentisphaera araneosa HTCC2155]
Length = 372
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 2/171 (1%)
Query: 121 LANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADP 180
L+ ALS E A+DTE ++F L+QI + E +L+D + + IL+
Sbjct: 14 LSRALS-EKDIALDTEFVWTKTFHPIPGLLQIKSAGEIHLIDLLIENFPKEILKELLESR 72
Query: 181 GVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLETYCGVATNKF 239
VCK+ H D D+ + N+FDT A P Q SLA L + +K
Sbjct: 73 DVCKILHSPDQDLKLFKLFCDAEAKNIFDTQLAYAFTGAPKQVSLAKLCLEMMDIEISKT 132
Query: 240 LQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
Q DW +RPL L YA D YL+ I + L +LK+ G + + ++K
Sbjct: 133 QQVSDWTKRPLKDSQLNYAAEDVRYLIEITETLREKLKENGRYDWFLEENK 183
>gi|440231154|ref|YP_007344947.1| ribonuclease D [Serratia marcescens FGI94]
gi|440052859|gb|AGB82762.1| ribonuclease D [Serratia marcescens FGI94]
Length = 373
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 32/285 (11%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ + T + L ++ A+DTE R++ LIQ+ ++ L+D +
Sbjct: 2 NYTLITTDAGLQQVCEQARTHAQIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLP-- 59
Query: 168 DEISILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-S 223
I+ QPF +D V K H D+ F L DT +P
Sbjct: 60 --ITRWQPFIDLLSDKAVVKYLHAGSEDLEVFLNAFQTLPTPLVDTQILAAFTGRPLSCG 117
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
A L+ Y V +K R DW RPL QYA D YLL +A LV E++Q G
Sbjct: 118 FATLVAAYMQVELDKSESRTDWLARPLTERQCQYAAADVFYLLPMAGQLVQEVEQAG--- 174
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
+ +L RRS T+ ++ +EI + ++L Q G
Sbjct: 175 -WTEAASNECLLLCQRRSETLAPELAYREINNA----------WQLRPRQLGC------- 216
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+++L AWR AR D ++ FV+ ++ + A+A P + ++
Sbjct: 217 ---LQKLAAWRLQQARQRDLAVNFVVREENLWAVARHMPTSMGEL 258
>gi|409422781|ref|ZP_11259865.1| ribonuclease D [Pseudomonas sp. HYS]
Length = 377
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQ+ YL+D + + D L DP V KV H
Sbjct: 26 FVALDTEFMRVDTFYPKAGLIQVGDGARAYLIDPLRIGD-WQPLAGLLEDPQVIKVLHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R LFDT A L+ S+ Y L++ G+ K R DW Q
Sbjct: 85 SEDLEVLSRLTGSLPAPLFDTQLAAGYLNL-GFSMGYSRLVQEVLGIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + + L +L +++++ +D V A R T +
Sbjct: 144 RPLSETQVSYAAEDAVHLAELYERLRPQLS--ADKHAWVLEDGAELV--AQLRRETDPYE 199
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+Y + + + ++L Q V +R LCAWR+ AR D
Sbjct: 200 LYRE-----------AKLAWKLSRAQLAV----------LRELCAWREREARARDLPRNR 238
Query: 368 VLSDQAIIALANKAP 382
++ + A+ +A P
Sbjct: 239 IVRENALWPMARTQP 253
>gi|359441689|ref|ZP_09231579.1| ribonuclease D [Pseudoalteromonas sp. BSi20429]
gi|358036517|dbj|GAA67828.1| ribonuclease D [Pseudoalteromonas sp. BSi20429]
Length = 376
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 40/281 (14%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
+ET++QLN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IETQNQLNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KV H D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWEILK----DPAVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ G+ +K R +W QRPL + L YA D YLL + ++ + G +
Sbjct: 122 VKELQGIEIDKSESRTNWLQRPLTKKQLDYAAADTFYLLPCFELIIDRINAAGFFDIVIN 181
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESY----PGEAAASSIFFRLLNGQGGVSSISSVT 343
+ + L A +R+ ++ K+I++ P E A
Sbjct: 182 ESE----LIAKKRAFQTPDELLYKDIKNAWQLKPHELA---------------------- 215
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+++ L WR A + +L FVL + + +A + P++
Sbjct: 216 --VLKELAVWRRNKAIKKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|392532926|ref|ZP_10280063.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
arctica A 37-1-2]
Length = 376
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 40/281 (14%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
+ET++QLN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IETQNQLNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KV H D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWEILK----DPAVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ G+ +K R +W QRPL + L YA D YLL + ++ + G +
Sbjct: 122 VKELQGIEIDKSESRTNWLQRPLTKKQLDYAAADTFYLLPCFELIIDRINAAGFFDIVIN 181
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESY----PGEAAASSIFFRLLNGQGGVSSISSVT 343
+ + L A +R+ ++ K+I++ P E A
Sbjct: 182 ESE----LIAKKRAFQTPDELLYKDIKNAWQLKPHELA---------------------- 215
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+++ L WR A + +L FVL + + +A + P++
Sbjct: 216 --VLKELAVWRRNKAIKKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|298709045|emb|CBJ30994.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 216
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 18/193 (9%)
Query: 41 CYLQSEPKPQHNFKRVLADNSYSPFKHANKEKSSGSHPYELEI--TALLENPRPEFDFSN 98
C+ S + F++ L N+ P N + + +E+E TA LE P
Sbjct: 7 CFHASVQLHEPGFEQWLRANA-PPASLPNAYGYAAALDFEVEKAQTAFLEWP-------- 57
Query: 99 VDLDLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKED 158
L + +V+T ++L+ LA L+ ++ D E H+ R++ G L+QISTE +D
Sbjct: 58 ----LLHDVEYEYVDTPAKLSALAEDLNACREWSFDVEAHNARTYYGLACLLQISTEWKD 113
Query: 159 YLVDTIA--LHDEISILQPFFADPGVCKVFHGSDN-DVMWLQRDFHIYVVNLFDTAKACE 215
Y+VD +A + D + +L+ F +P V K+ H + DV L RDF +VN DT +A
Sbjct: 114 YVVDPLAEGMWDNMGLLRDAFGNPDVLKIGHSIRSLDVPSLFRDFGFVIVNAVDTEEAVH 173
Query: 216 VLSKPQKSLAYLL 228
L Q +L +L
Sbjct: 174 ALGGKQSALGKVL 186
>gi|332290211|ref|YP_004421063.1| ribonuclease D [Gallibacterium anatis UMN179]
gi|330433107|gb|AEC18166.1| ribonuclease D [Gallibacterium anatis UMN179]
Length = 377
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
S+ ++ +QL +L A+DTE +RS+ LIQ+ + L+D + +
Sbjct: 3 SYQIIQQDAQLKQLCEQARHYSVVALDTEFERVRSYYAKLGLIQLYFGADVALIDPLTIT 62
Query: 168 DEISILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS- 223
D QPF AD V K+ H S D+ + F + DT L PQ +
Sbjct: 63 D----WQPFIALLADANVLKILHASGEDIEIFHQQFQQIPTPMLDTQIMANFLGFPQSAG 118
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAEL 276
A L + Y V +K R DW +RPL L YA D +YLL I + + A +
Sbjct: 119 FALLAQHYLQVELDKKASRTDWLKRPLSERQLNYAAADVYYLLPIYQKMAATM 171
>gi|326332250|ref|ZP_08198530.1| putative ribonuclease D [Nocardioidaceae bacterium Broad-1]
gi|325949956|gb|EGD42016.1| putative ribonuclease D [Nocardioidaceae bacterium Broad-1]
Length = 422
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDEISILQPFF-ADPGVCKVFHG 188
+D E+ S + LIQ+ E +L+D I E++ +QP A G + H
Sbjct: 54 VGIDAERASGYRYSNRAYLIQLRREGSGIWLIDPI----ELTTMQPLVEALEGTEWILHA 109
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+ D+ L D ++ LFDT A +L P+ L L+ET G K DW R
Sbjct: 110 ATQDLPCLS-DLGLHPAALFDTELAGRLLGYPRVGLGTLVETVLGFTMLKEHSAADWSTR 168
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PLP L+YA D L+ + + L AEL QG +A R L+
Sbjct: 169 PLPDAWLEYAALDVEVLVELREALAAELVAQGK--------------DAWARQEFDWLRG 214
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
+ + + +A + + G+ G+++ VR L RD +A+ D + +
Sbjct: 215 FEAPVRT---DAWRRTSGMHRVRGRRGLAA--------VRELWTERDRIAQQRDVTPSRI 263
Query: 369 LSDQAIIALANKAPANR 385
+ D AI+A A P ++
Sbjct: 264 IPDAAIVAAAQDLPQDK 280
>gi|375094980|ref|ZP_09741245.1| ribonuclease D [Saccharomonospora marina XMU15]
gi|374655713|gb|EHR50546.1| ribonuclease D [Saccharomonospora marina XMU15]
Length = 402
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 27/246 (10%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDEISILQPFFADPGVCKVFHGS 189
A+DTE+ S + L+Q+ E L+D I L D + L AD V H +
Sbjct: 38 IAIDTERASGYRYWPRAYLVQLRREGSGTLLIDPIPLRDHLEPLGAVLAD--TEWVLHAA 95
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRP 249
D+ L D + +LFDT A + + +L L+E G K DW +RP
Sbjct: 96 SQDLPCLA-DLGLRPPSLFDTELAGRLAGHERVALGTLVENLLGYKLEKGHSAADWSKRP 154
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
LP + L YA D L+ + + L AEL QG LE +R+
Sbjct: 155 LPTDWLNYAALDVELLVPLREKLEAELAAQGK-------------LEWARQE-------- 193
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
+ + + G+ A S +R +G V + + VR L RD +AR D + +L
Sbjct: 194 FEWVRTSGGQPAPRSEPWRRTSGIHKVRTARGLAA--VRALWQARDELARKRDRAPSRIL 251
Query: 370 SDQAII 375
D AII
Sbjct: 252 PDSAII 257
>gi|167035116|ref|YP_001670347.1| ribonuclease D [Pseudomonas putida GB-1]
gi|166861604|gb|ABZ00012.1| ribonuclease D [Pseudomonas putida GB-1]
Length = 377
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 111/276 (40%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L E + F AVDTE + +F LIQI + +L+D + + D
Sbjct: 7 WIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGD-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLADLLEDSGVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L L EL+ + D
Sbjct: 125 QDVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHL----AELFTELRPR------LSD 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E+E +R + ++ ++R
Sbjct: 175 DKYTWVLE----DGAELVAALRREVE--------PETLYRDVK---LAWKLAPQQLAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D +L + ++ +A P N
Sbjct: 220 ELCAWREREARHRDVPRNRILKEHSLWPMAKSQPNN 255
>gi|28493361|ref|NP_787522.1| ribonuclease D [Tropheryma whipplei str. Twist]
gi|28476402|gb|AAO44491.1| ribonuclease D [Tropheryma whipplei str. Twist]
Length = 391
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 VETKSQLNELANALSKEFF-FAVDTEQ-HSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+ET Q E L F FA+DTE+ + + F L+Q+ + + D
Sbjct: 19 IETNRQYEEALEGLRSGFGPFAIDTERANRFKYDQEFPWLVQLYRRPTGCFIFDTSKIDN 78
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
+S L V V H + ND+ L+R I++ NLFDT AC +L+ P+ +L+Y+ E
Sbjct: 79 LSKLGDLIGSEEV--VIHAAINDIKSLKR-VGIHITNLFDTEIACRLLNIPKVNLSYVTE 135
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
+ V K +W RPL + L+YA+ D +LL +++ L L+ + N+ ++
Sbjct: 136 KFINVKLRKEYSTVNWSARPLNKKYLEYAEGDVKHLLDLSQALKTALRAE-NKLEIAKEE 194
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
+ + +S L + +E A A +++
Sbjct: 195 FSHVFMVVKHQSEIDKLDKFCHGLEDDMQRAVAKNLW----------------------- 231
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
RD +AR D +LS++AI LA + P N ++ T+ + D
Sbjct: 232 --KARDEIARSKDIFTPRILSNKAIRILAKQVPEN-LEILKTLLKKD 275
>gi|397565072|gb|EJK44464.1| hypothetical protein THAOC_36991 [Thalassiosira oceanica]
Length = 735
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 157 EDYLVDTIA--LHDEI-SILQPFFADPGVCKVFHG-SDNDVMWLQRDFHIYVVNLFDTAK 212
+D+++D +A + D I SIL P FADP V K+ H D L +DF I VVN FDT +
Sbjct: 334 KDFVIDPLAPGVWDAIPSILGPIFADPSVVKIGHAIGGMDTKSLHQDFGILVVNAFDTYE 393
Query: 213 ACEVLSKPQKS---LAYLLETYCGVATNKF------LQREDWRQRPLPAEMLQYAQTDAH 263
+C VL + LA L Y K+ Q+ DWR RPL L Y + D
Sbjct: 394 SCRVLMGARDGGLGLAKLCRRYGLPDWEKYQALKNRYQKSDWRMRPLDDGALTYGRYDVR 453
Query: 264 YLLYIAKCLVAELKQQGNENSYCP 287
YL + + L+ +L G + CP
Sbjct: 454 YLCALRRLLMRDL--VGKDMLGCP 475
>gi|195328899|ref|XP_002031149.1| GM25820 [Drosophila sechellia]
gi|194120092|gb|EDW42135.1| GM25820 [Drosophila sechellia]
Length = 355
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 48 KPQHNFKRVLADNSYSPFKHANKEK-------------------SSGSHPYELEITALLE 88
+PQ F+ + +++ +PF KEK S HPYE E+ E
Sbjct: 191 RPQTQFREPVDNSAQNPFVPRLKEKPNSLKPLALLPEYDDAGNVQSYLHPYEFELLKF-E 249
Query: 89 NPRPEFDFSNVDLD-LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT 147
P + L L + V+T +L + L + A+D E HS R+F+G T
Sbjct: 250 PPTEQLQKQKPVLPALMAETELMVVDTVEKLKQALEELRQAPQIAIDVEHHSYRTFMGIT 309
Query: 148 ALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHG 188
L+Q+ST +DY+ DT+ L D++ IL DP K+ HG
Sbjct: 310 CLVQMSTRSKDYIFDTLILRDDMHILNLVLTDPKKLKILHG 350
>gi|90419527|ref|ZP_01227437.1| ribonuclease D [Aurantimonas manganoxydans SI85-9A1]
gi|90336464|gb|EAS50205.1| ribonuclease D [Aurantimonas manganoxydans SI85-9A1]
Length = 385
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T ++L+E + L+ F VDTE +F LIQ++++ LVD +A D +
Sbjct: 6 ITTTAELSEACSRLAAAEFVTVDTEFIRETTFWPELCLIQMASDDLAVLVDPLA--DGLD 63
Query: 172 ILQPFF---ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
L PFF D + KVFH + DV + + I V LFDT A V + S+AY
Sbjct: 64 -LAPFFDLMRDERIVKVFHAARQDVEIIHKLGDIIPVPLFDTQVAAMVCGFGE-SIAYDQ 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ +K + DWR+RPL + L YA D YL + + L A+L ++G +
Sbjct: 122 LVARTTDGRIDKTSRFTDWRRRPLSDQQLAYALADVTYLRDVYRFLSAQLAEKG--RTRW 179
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
D++ + + + + +P +A +R L + + +
Sbjct: 180 VDEEMAVLTDPA-------------TYDLHPDDA------WRRLK----LRVRKPIELQI 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ + AWR+ AR D+ +L D AI +A +AP +
Sbjct: 217 LKEVAAWREREAREADKPRGRILKDDAIYEIAQQAPTD 254
>gi|40063040|gb|AAR37896.1| ribonuclease D, putative [uncultured marine bacterium 560]
Length = 358
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 32/271 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T+ QL ++ + A+DTE + ++ L+QI+T + +D ++++D
Sbjct: 15 IQTRPQLERYLKTINNDSSLAIDTEFKRINTYYPELCLVQIATTQFAECIDVLSIND--- 71
Query: 172 ILQPFFADPGVCK---VFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYL 227
L+P F K + H + D+ L V+LFDT A +L+ P Q S L
Sbjct: 72 -LEPLFEKLYHNKTEWIVHSARQDIEALYHLSKRIPVSLFDTQIAASLLNYPLQISYQAL 130
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
E V +K R DW RPLPA +++YA D YLL + L EL ++
Sbjct: 131 TEILQDVLLDKSYTRFDWTTRPLPANVVEYALDDVRYLLPNFEKLKHEL--TISKKIQWL 188
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D++ F+L+ ++Y IE ++ G+S + QD
Sbjct: 189 DEETRFLLDQ---------ELYKPSIE-------------QICYKTKGLSKLGKKFQDKA 226
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALA 378
+L WR+ A+ ++ ++++SDQ ++ A
Sbjct: 227 IKLVTWREKSAQQKNKPRKWIMSDQKLLDYA 257
>gi|117920828|ref|YP_870020.1| ribonuclease D [Shewanella sp. ANA-3]
gi|342179224|sp|A0KXU5.1|RND_SHESA RecName: Full=Ribonuclease D; Short=RNase D
gi|117613160|gb|ABK48614.1| ribonuclease D [Shewanella sp. ANA-3]
Length = 388
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 107/281 (38%), Gaps = 26/281 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
F +V ++ LN L + +DTE R++ LIQ K L+D +AL D
Sbjct: 23 FQYVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVALPD 82
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
+S +P + K+ H D+ LFD+ A + A L
Sbjct: 83 -LSAFWSLLDNPNIIKLVHSCSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKL 141
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ET G +K R DW +RPL L YA D YL + L +LK Q
Sbjct: 142 VETCLGEVIDKGESRTDWMRRPLTEAQLSYAANDVLYLYQLYPQLADKLKAQ-------- 193
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D+ ++ E R E + + R+ N ++ +
Sbjct: 194 -DRLGWLYEEGERMT-----------EGRLATPDMDTAYLRVKNA----FQLTEHQLAYL 237
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ L WR A D +L FV+ D +IALA K P + D+
Sbjct: 238 KVLAKWRLEKALARDLALGFVIKDHGLIALAKKQPKSMGDL 278
>gi|148546540|ref|YP_001266642.1| ribonuclease D [Pseudomonas putida F1]
gi|421524076|ref|ZP_15970703.1| ribonuclease D [Pseudomonas putida LS46]
gi|148510598|gb|ABQ77458.1| ribonuclease D [Pseudomonas putida F1]
gi|402752321|gb|EJX12828.1| ribonuclease D [Pseudomonas putida LS46]
Length = 377
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 128/321 (39%), Gaps = 48/321 (14%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L E + F AVDTE + +F LIQI + +L+D + + +
Sbjct: 7 WIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGN-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLADLLEDSGVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L L D
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E+E E+ + ++ ++R
Sbjct: 175 DKYAWVLE----DGAELVAALRREVEP---ESLYRDVKL--------AWKLAPQQLAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADS--------DVD 400
LCAWR+ AR D +L + ++ +A P N + +A+ D D +
Sbjct: 220 ELCAWREREARNRDVPRNRILKEHSLWPMAKSQPNN----LSALAKIDEMHPRTIRQDGE 275
Query: 401 CL----NLSSSLPS---PSPV 414
CL ++SLP+ P+P+
Sbjct: 276 CLIQLIKRAASLPAEQWPAPL 296
>gi|392554671|ref|ZP_10301808.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
undina NCIMB 2128]
Length = 376
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA---LHD 168
++T+++LN + + A+DTE R+ ALIQ+ + L+D +A L D
Sbjct: 6 IQTQNELNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVYDGEHLALIDPLAELSLFD 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
IL+ DP V KV H D+ Q+ LFDT A ++L + A +
Sbjct: 66 FWQILK----DPNVLKVLHSPSEDIEVFQKYAGFVPYPLFDTQFALQLLGEGNCMGFALM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++T + +K R +W QRPL + L+YA D ++LL + ++ +K
Sbjct: 122 VKTLLNIEIDKSESRTNWLQRPLTQKQLEYAAADTYHLLPCFELIIDSIKAA-------- 173
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D F+ V+ S V K P E + ++ + + V ++
Sbjct: 174 -DLFDIVINESEL-------VANKRAFQTPDE-----LLYKEIKNAWQLKPHELV---VL 217
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ L WR A + +L FVL + + +A + P++
Sbjct: 218 KELAVWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|407692384|ref|YP_006817173.1| ribonuclease D [Actinobacillus suis H91-0380]
gi|407388441|gb|AFU18934.1| ribonuclease D [Actinobacillus suis H91-0380]
Length = 371
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
++WV+T +L E+ S++ A+DTE R++ LIQ+ ++ L+D + D
Sbjct: 7 YIWVDTNQKLAEVCRNASQKPAVALDTEFIRTRTYYPKLGLIQLFDGEQVSLIDPTTI-D 65
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYL 227
E S A+ V KV H D+ Q F L DT A L
Sbjct: 66 EFSPFIALLANQQVVKVLHACSEDLEVFQHRFKQLPTPLVDTQIMAGFAGIGVSMGFAKL 125
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ Y + +K R DW RPL E LQYA D YLL + + LV +
Sbjct: 126 VAHYLQIELDKGASRTDWLARPLSEEQLQYAAADVWYLLPVYQRLVVD------------ 173
Query: 288 DDKFNFVLEASRRSNTV---CLQVYTKEIESYPGEAAAS---SIFFRLLNGQGGVSSISS 341
L+ +R N V C Q ++ ++ P + A S +RL Q V +
Sbjct: 174 -------LDVTRWQNAVEEEC-QTLLEKRQNLPNSSKAYKDISNAWRLTPAQLAVLQV-- 223
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L WR A D +L FV+ +Q + +A P + + +
Sbjct: 224 --------LAKWRMEEAEKRDLALNFVVKEQNLFEIAKLQPKHTSQL 262
>gi|338983706|ref|ZP_08632871.1| Ribonuclease D [Acidiphilium sp. PM]
gi|338207356|gb|EGO95328.1| Ribonuclease D [Acidiphilium sp. PM]
Length = 392
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 29/286 (10%)
Query: 103 LQRSDSF---VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
++ S SF V +ET L L + L+ E F VDTE +++ ++Q+ +
Sbjct: 1 MKPSPSFPEPVLIETTEALAALCDRLAAEPFVTVDTEFMREKTYFPELCVVQLGGANDVA 60
Query: 160 LVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS- 218
++D + +++ L FA+P V KVFH D+ F LFDT A V
Sbjct: 61 VIDAQSEGLDLAPLGALFANPAVTKVFHACRQDIEIFLLKFGAVPAPLFDTQVAAMVAGF 120
Query: 219 KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
Q L+ + G +K + DW RPL + YA D +L + + L A L +
Sbjct: 121 GDQVGYDTLVSSLAGGRIDKAHRFSDWSARPLSRAQIAYAAADVTWLRPVYEGLRARLTR 180
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
+G + ++V E + V T E P +A +R L +GG
Sbjct: 181 EG---------RLDWVAEEA----AVLADPATYRTE--PEDA------WRRLKLRGG--- 216
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ LV+ + AWR+ A + + ++ D+ I LA APA+
Sbjct: 217 -NRRQLALVKAIAAWREREAMRVNVPRQRIVRDEQIPELAALAPAD 261
>gi|405983331|ref|ZP_11041637.1| ribonuclease D [Slackia piriformis YIT 12062]
gi|404388937|gb|EJZ84018.1| ribonuclease D [Slackia piriformis YIT 12062]
Length = 382
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 26/274 (9%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ + QL E + AVDTE +++ LIQ++TE+ VD + D
Sbjct: 1 MYITDQKQLKEFVAHAKQSSVLAVDTEFLREKTYWPKLCLIQLATEEVSVAVDPFEIKD- 59
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLL 228
++ L F D + K+FH + D+ + + +FDT A +L Q L+
Sbjct: 60 LTPLIDLFVDESITKLFHAAVQDMELIVHALGVVPKPVFDTQVAASLLGDTLQIGYGALV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ CGV K DW +RPL ++YA D YL + + + +L++ G + D
Sbjct: 120 MSECGVRLKKADSFTDWSRRPLTDSQIEYALDDVIYLPMLYRSMKKKLEELGRLSWL--D 177
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
F+ + + R YT + + F RL V+ +SS R
Sbjct: 178 RDFDDLSDIRR---------YTVDPRTR---------FKRLKR----VNQLSSKQLSAAR 215
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ AWR+ +A + +++LSD+ +I + + P
Sbjct: 216 EIAAWREELAMKRNIPRKWILSDEQVIEICKREP 249
>gi|254480593|ref|ZP_05093840.1| ribonuclease D [marine gamma proteobacterium HTCC2148]
gi|214039176|gb|EEB79836.1| ribonuclease D [marine gamma proteobacterium HTCC2148]
Length = 373
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 125/294 (42%), Gaps = 46/294 (15%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQI-----STEKEDYLVDTIAL 166
VE+ + L EL NA VDTE +F AL+Q+ +++D + +
Sbjct: 6 VESDAALAELMNAAIGCDAVMVDTEFMRRNTFYPQVALVQLCFCGGGATGTAWMIDPLKI 65
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
D + L F D GV K+ H + D+ QR + + LFDT KA ++ L Y
Sbjct: 66 EDP-APLANLFKDAGVIKILHSASEDLEVFQRWLGVLPLPLFDTQKAAALVGL-DFGLGY 123
Query: 227 --LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
++ C K R DW QRPL YA D +LL A ++AE
Sbjct: 124 RSMVLELCNEDLPKGETRSDWLQRPLTESQCHYAAQDVIWLLD-AYQIIAERCHSMQ--- 179
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI-FFRLLNGQGG-----VSS 338
++++VLE E+ G A+ SS ++R + G +++
Sbjct: 180 -----RYDWVLEDGE--------------EACRGLASMSSAQYYRRIKGAWKLEPRELAA 220
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTI 392
+ ++++ WR+ AR D+ +++ D+A + LA PAN D+ + I
Sbjct: 221 LIAISE--------WRERTAREKDKPRSWIIDDKACLQLAQVGPANMNDLRSKI 266
>gi|339999645|ref|YP_004730528.1| ribonuclease D [Salmonella bongori NCTC 12419]
gi|339513006|emb|CCC30750.1| ribonuclease D [Salmonella bongori NCTC 12419]
Length = 375
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 87/217 (40%), Gaps = 19/217 (8%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ET L L A+ A+DTE R++ LIQ+ L+D I + D S
Sbjct: 6 IETDDALASLCAAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGAHVALIDPIGITD-WS 64
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLET 230
L+ D G+ K H D+ + F L DT +P A ++E
Sbjct: 65 PLKAVLRDAGITKFLHAGSEDLEVFLKAFGELPEPLIDTQILAAFCGRPLSWGFASMVEE 124
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAE--------------- 275
Y GVA +K R DW RPL +YA D YLL IAK L+ E
Sbjct: 125 YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR 184
Query: 276 LKQQGNENSYCPDDKFNFVLEAS--RRSNTVCLQVYT 310
L QQ + P++ + + A R CLQ+ T
Sbjct: 185 LMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLT 221
>gi|422645745|ref|ZP_16708880.1| ribonuclease D [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330959294|gb|EGH59554.1| ribonuclease D [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 377
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 122/290 (42%), Gaps = 37/290 (12%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI K +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGKSAWLIDPLLIND-WRPLSALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPANR------TDVYTTIAQADSD--VDCLNLSSSLP 409
++ + ++ LA P N D++ + D + ++ + +SSLP
Sbjct: 239 IVREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIKTASSLP 288
>gi|422631988|ref|ZP_16697165.1| ribonuclease D [Pseudomonas syringae pv. pisi str. 1704B]
gi|330941897|gb|EGH44622.1| ribonuclease D [Pseudomonas syringae pv. pisi str. 1704B]
Length = 377
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WRPLSALLENPDVIKVLHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLDIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L A L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFTILRARLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|333900086|ref|YP_004473959.1| ribonuclease D [Pseudomonas fulva 12-X]
gi|333115351|gb|AEF21865.1| ribonuclease D [Pseudomonas fulva 12-X]
Length = 377
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 35/281 (12%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
VW+ + L K+ F A+DTE + +F L+Q+S + YL+D + + D
Sbjct: 5 IVWIRDDASLAAQCAVWRKQPFVALDTEFMRVDTFYPIAGLLQVSEGERAYLIDPLLIGD 64
Query: 169 EISILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
PF A DP V KV H D+ R LFD+ A L+ S+
Sbjct: 65 ----WAPFAALLEDPQVVKVVHACSEDLEVFLRLTGSLPAPLFDSQLAAGYLNL-GFSMG 119
Query: 226 Y--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
Y L++ + K R DW QRPL + YA D +L + + L A L +N
Sbjct: 120 YSRLVQAVLDIELPKGETRSDWLQRPLSETQVSYAAEDVVHLAELYRRLQARLS--AEKN 177
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
++ +D L A R T + Y + + ++L Q V
Sbjct: 178 AWVLEDGAE--LAAGLRRETPPEEAYKD-----------AKLAWKLSRAQLAV------- 217
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+R LC WR+ AR ++ ++ + ++ LA P++
Sbjct: 218 ---LRALCTWRERQARARNQPRNRIIREHSLWPLARHQPSD 255
>gi|421615623|ref|ZP_16056645.1| ribonuclease D [Pseudomonas stutzeri KOS6]
gi|409782427|gb|EKN61988.1| ribonuclease D [Pseudomonas stutzeri KOS6]
Length = 359
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 121/288 (42%), Gaps = 33/288 (11%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV L L + + AVDTE + +F L+Q+ + YL+D +A+ +
Sbjct: 7 WVLDDEHLARLCAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPLAVRN-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
+ DP V KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 TAFAGVLQDPAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNI-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL ++YA DA +L + + L+ +L + ++ ++ +
Sbjct: 125 QAVLGIELPKGETRSDWLQRPLSEMQVRYAAEDAQHLAELYEALLPKLSE--DKRAWLLE 182
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D V R S+ + +E++ +RL Q V ++
Sbjct: 183 DGAELVANLQRESDP---EEAYREVKQA----------WRLKPQQLAV----------LK 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQAD 396
L AWR+ AR ++ VL + ++ LA P + T+A+ D
Sbjct: 220 ALTAWRERQARARNQPRNRVLREASLWPLARTQPRD----LVTLARID 263
>gi|386010914|ref|YP_005929191.1| Rnd [Pseudomonas putida BIRD-1]
gi|313497620|gb|ADR58986.1| Rnd [Pseudomonas putida BIRD-1]
Length = 377
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 128/317 (40%), Gaps = 40/317 (12%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L E + F AVDTE + +F LIQI + +L+D + + +
Sbjct: 7 WIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGN-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLADLLEDSGVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L L D
Sbjct: 125 QEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFSVLRPRLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E+E E+ + ++ ++R
Sbjct: 175 DKYAWVLE----DGAELVAALRREVEP---ESLYRDVKL--------AWKLAPQQLAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT------DVYTTIAQADSD--VD 400
LCAWR+ AR D +L + ++ +A P N + +++ + D + +
Sbjct: 220 ELCAWREREARNRDVPRNRILKEHSLWPMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQ 279
Query: 401 CLNLSSSLPS---PSPV 414
+ ++SLP+ P+P+
Sbjct: 280 LIKRAASLPAEQWPAPL 296
>gi|293395838|ref|ZP_06640120.1| ribonuclease D [Serratia odorifera DSM 4582]
gi|291421775|gb|EFE95022.1| ribonuclease D [Serratia odorifera DSM 4582]
Length = 373
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 32/281 (11%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ + T + L ++ K A+DTE R++ LIQ+ ++ L+D +
Sbjct: 2 NYTLITTDAGLQQVCEQARKHAQIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLP-- 59
Query: 168 DEISILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-S 223
I QPF AD V K H D+ F+ L DT KP
Sbjct: 60 --IKQWQPFVDLLADSAVVKFLHAGSEDLEVFLNAFNTLPTPLVDTQILAAFTGKPLSCG 117
Query: 224 LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
A L+ Y V +K R DW RPL YA D YLL +A+ LV E +Q G
Sbjct: 118 FATLVAQYMQVELDKSESRTDWLARPLTERQCVYAAADVFYLLPMARQLVQETEQAG--- 174
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
+ +L RRS T+ ++ +EI + ++L Q G
Sbjct: 175 -WTAAASSECLLLCQRRSETLAPELAYREITNA----------WQLRARQLGC------- 216
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+++L WR AR D ++ FV+ ++ + A+A P +
Sbjct: 217 ---LQKLAEWRLRQARERDLAVNFVVREENLWAVARHMPGS 254
>gi|152978783|ref|YP_001344412.1| ribonuclease D [Actinobacillus succinogenes 130Z]
gi|150840506|gb|ABR74477.1| ribonuclease D [Actinobacillus succinogenes 130Z]
Length = 383
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 26/288 (9%)
Query: 102 DLQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLV 161
++Q F + T S L + ++ A+DTE +RS+ LIQ+ + L+
Sbjct: 4 EIQNLPQFNLITTNSGLKTVCEQAQQKSAVALDTEFIRIRSYYPKLGLIQLYDGERVSLI 63
Query: 162 DTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ 221
D + D S AD V KV H D+ F + DT L+ P
Sbjct: 64 DPTTITD-FSPFTALLADINVIKVLHACYEDLEVFSHYFQQLPEPIMDTQVMAGFLAFPH 122
Query: 222 KS-LAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+ LA L+ Y + +K R DW RPL + LQYA D YLL + + + EL +
Sbjct: 123 STGLASLIRHYLALEIDKGASRTDWLARPLSEKQLQYAAADVWYLLPLYEKMAVELAKTR 182
Query: 281 NENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSIS 340
+++ D +LE R C++ A S + + N +S
Sbjct: 183 WQSAVEFD--CGLLLEKQR-----CVK-------------EAESAYLNVPNAW----RLS 218
Query: 341 SVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
V ++ L WR A D +L FV+ ++++ +A AP N +++
Sbjct: 219 PVELMRLKLLAKWRQEEAVKRDLALNFVVHNESLWTVAKHAPKNTSEL 266
>gi|333996585|ref|YP_004529197.1| 3'-5' exonuclease domain-containing protein [Treponema primitia
ZAS-2]
gi|333741449|gb|AEF86939.1| 3'-5' exonuclease domain protein [Treponema primitia ZAS-2]
Length = 282
Score = 73.2 bits (178), Expect = 7e-10, Method: Composition-based stats.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 107 DSFVWVETKSQLNELANALSKEFF--FAVDTE-QHSLRSFLGFTALIQISTEKEDYLVDT 163
D+F +E +S L N L +E ++D E ++L ++ LIQI K +++D
Sbjct: 2 DNFTLIENESGLIAFRNYLHRENIDKISMDFEGDYNLHAYGEKLCLIQIFDGKRYFIIDP 61
Query: 164 IALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS 223
+ + +E IL FF + + K +G+++D+ + + + + + ++FD ++L +
Sbjct: 62 LKIRNEELIL--FFENKKIVKYMYGTESDISLIYKQYGVKLASVFDQKILVDLLEIEPRG 119
Query: 224 LAYLLETYCGVATN--KFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
L +L+ + T K Q +W +RP+ E LQYA D YL I L+ + ++
Sbjct: 120 LDAILKNILNIETKNKKKFQMLNWLRRPIDKEALQYALNDVAYLFQINAILMDRIIKENK 179
Query: 282 ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISS 341
N + +L +R V E E PG FR + +++
Sbjct: 180 YN--------DLLLSIIKRDFEV-------EKERVPG-------VFRKIE----FKNLAK 213
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALAN 379
+D ++ A RD +AR ++ +LS++AI L N
Sbjct: 214 GKKDTFTKIHALRDEIAREYNLPPNNLLSNEAIFNLVN 251
>gi|229589039|ref|YP_002871158.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
gi|229360905|emb|CAY47765.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
Length = 377
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F LIQI YL+D + + D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPLTI-DNWQPLAALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQAVLDIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L D+K+ +VL+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAEVYTRLRPRLS----------DEKYAWVLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR D
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREQQARARDLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IIREHSLWPLAKSQPDN 255
>gi|407794360|ref|ZP_11141387.1| ribonuclease D [Idiomarina xiamenensis 10-D-4]
gi|407212960|gb|EKE82821.1| ribonuclease D [Idiomarina xiamenensis 10-D-4]
Length = 387
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 127/284 (44%), Gaps = 36/284 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ ++QL E + ++ + A+D+E R++ L+Q + L+D + D
Sbjct: 17 ITAQAQLLEFCQQVREQGWVAIDSEFVRTRTYYAKLGLLQANCGHGAVLIDPLVGLD--- 73
Query: 172 ILQPFF---ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
L+PF+ D + KV H + D+ + + +L D+ A L SL Y
Sbjct: 74 -LKPFWRLVGDADIVKVMHAAGEDIQLFWQQGGVQPQHLLDSQIAAAFLGWG-DSLGYAA 131
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E Y ++ +K R DW RPL L YA D ++Y+A+ A+L+++
Sbjct: 132 LVERYYDISLDKSQSRTDWLARPLSEAQLAYAADD---VIYLAR-FYADLRER-----LV 182
Query: 287 PDDKFNFVL-EASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
+++ L E++++ + C + + R L+ G +++
Sbjct: 183 SEERLQLTLQESAQQVDKRCFE---------------PPLALRYLDV-GNAWQLNTRQLA 226
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++R LC WR A+ D L FV+ + A++ALA + P + +Y
Sbjct: 227 VLRELCQWRVSRAQQQDIPLNFVVKEGALMALAKRPPQQKQHLY 270
>gi|422660413|ref|ZP_16722825.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M302278]
gi|331019018|gb|EGH99074.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M302278]
Length = 377
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D + L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WAPLSALLENPAVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSDTQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR++ AR +
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSCAQLAV----------LRELCAWREVQARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN------------RT-----DVYTTIAQADSDVDCLNLSSSLPS 410
++ + ++ LA P N RT + + Q + V +LP
Sbjct: 239 IIREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIQTAASVPAAEWPPALPE 298
Query: 411 PSPV 414
P PV
Sbjct: 299 PLPV 302
>gi|88705065|ref|ZP_01102777.1| ribonuclease D [Congregibacter litoralis KT71]
gi|88700760|gb|EAQ97867.1| ribonuclease D [Congregibacter litoralis KT71]
Length = 370
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 46/283 (16%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
VE L +L+ AVDTE S+ AL+Q+ T+ +L+D + + + +
Sbjct: 6 VENDDSLRGALASLAGADEIAVDTEFMRRNSYYPHIALLQLCTDDHAWLIDPLTISN-LD 64
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLE 229
L+ D KV H D+ + + L DT +A +L K L Y L++
Sbjct: 65 GLRALLTDSACIKVLHSCSEDLEVFRHWLGVLPSPLVDTQRATALLGK-GFGLGYRALVK 123
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
GV +K R DW +RPL YA D L+ + L ++QG
Sbjct: 124 ELLGVELDKGETRSDWLKRPLSESQCHYAALDVLELVPAWRILRELAEEQG--------- 174
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGG--------VSSISS 341
+ +VL+ GE A RLL + G S +S
Sbjct: 175 RMQWVLDE--------------------GEEA-----IRLLKDRDGQIYRRVKSASRLSR 209
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ +RRLC WR+ +AR D+ +++ D+A +A+A P +
Sbjct: 210 RQLEALRRLCEWREDLARAVDKPRGWIVEDKAFLAIAMAIPED 252
>gi|423140318|ref|ZP_17127956.1| ribonuclease D [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379052872|gb|EHY70763.1| ribonuclease D [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 371
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 85/215 (39%), Gaps = 19/215 (8%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ET L L A+ A+DTE R++ LIQ+ L+D + + D S
Sbjct: 2 IETDDALASLCGAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISD-WS 60
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLET 230
L+ D G+ K H D+ F L DT +P A ++E
Sbjct: 61 PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPAPLIDTQILAAFCGRPLSWGFASMVEE 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAE--------------- 275
Y GVA +K R DW RPL +YA D YLL IAK L+ E
Sbjct: 121 YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR 180
Query: 276 LKQQGNENSYCPDDKFNFVLEAS--RRSNTVCLQV 308
L QQ + P+D + + A R CLQ+
Sbjct: 181 LMQQRRQEIQVPEDAWRDITNAWQLRTRQLACLQL 215
>gi|357404370|ref|YP_004916294.1| ribonuclease D [Methylomicrobium alcaliphilum 20Z]
gi|351717035|emb|CCE22700.1| Ribonuclease D [Methylomicrobium alcaliphilum 20Z]
Length = 386
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 26/275 (9%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+++T +L+EL ++KE + A+DTE +++ L+QI+T + VD IAL D++
Sbjct: 6 YIDTPQKLDELCRQIAKESWLALDTEFLREKTYYPKFCLLQIATPEWVACVDPIAL-DDL 64
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLE 229
L +P + KVFH D+ + +FDT A +L + A L+
Sbjct: 65 GALFEVIYNPKIIKVFHSCRQDLEIFYQLTGKIPQPIFDTQIAAPLLGYQENPGYAMLVS 124
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
++ + +K R DW RPL LQYA D YL I + ++ +L + N + D
Sbjct: 125 SFLNINLSKAHTRTDWTVRPLSQAQLQYAADDVIYLCQIYQTMLKKLAEL-NRLDWLESD 183
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRR 349
F + + E Y E + + + ++ G + ++ +V+
Sbjct: 184 ---FAM--------------LNDPELY--EISPKNAWLKI----RGKNKLTGKQLSIVQT 220
Query: 350 LCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L WR+ A+ D ++L D + LA + P
Sbjct: 221 LAEWREQTAQKEDRPRNWLLRDDMMFELAKQQPGT 255
>gi|304321318|ref|YP_003854961.1| ribonuclease D [Parvularcula bermudensis HTCC2503]
gi|303300220|gb|ADM09819.1| ribonuclease D [Parvularcula bermudensis HTCC2503]
Length = 383
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 112 VETKSQ-LNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
+ T++Q L L L+K F VDTE R++ LIQ+++ +E ++D +A ++
Sbjct: 3 IVTQTQDLTALCGRLAKHDFVTVDTEFMRERTYYPKLCLIQVASTEEAAIIDPLAAALDL 62
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDT---AKACEVLSKPQKSLAYL 227
+ ADP V KVFH + D+ + LFDT A AC Q L
Sbjct: 63 APFLELLADPSVLKVFHAARQDLEIFYKLMGKVPAPLFDTQIAAMACG--HGDQVGYEAL 120
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
+ G +K + DW +RPL + L YA D +L+ + L+ EL+++G
Sbjct: 121 IREVTGAQVDKGSRFTDWAKRPLSDKQLTYALGDVTHLVDAYQALITELEEKGR 174
>gi|71278230|ref|YP_270192.1| ribonuclease D [Colwellia psychrerythraea 34H]
gi|71143970|gb|AAZ24443.1| ribonuclease D [Colwellia psychrerythraea 34H]
Length = 379
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+E + LN L L K A+DTE R+ L+Q+ ++ L+D +A+ D
Sbjct: 6 IEDQKSLNNLCEQLVKAKVLAIDTEFVRTRTLYAKLGLLQVCDGEQLALIDPLAIDD--- 62
Query: 172 ILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
L PF+A + + KV H D+ + VNL D+ L SL Y
Sbjct: 63 -LAPFWALLTNENITKVLHACSEDLEVFLTAGNCKPVNLIDSQIMMSFLGHGL-SLGYAA 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
+++ + + +K R DW +RPL + L YA D +L I L+AE+ Q G
Sbjct: 121 MVKHFTDIELDKSESRTDWTKRPLTEKQLDYASADVDHLFDIYPKLLAEITQAG------ 174
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRL-LNGQGGVSSISSVTQD 345
F+ A + ++ + +T IE S ++ + +N + + +
Sbjct: 175 ------FLAYAQIETQSMIDKKFTPIIE--------SEMYLNIKMNWRLNPKQL-----N 215
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
L++ L +WR A+ D L FV D ++ALA P
Sbjct: 216 LLKYLASWRFQQAKKRDLPLGFVAKDHTLMALAQSNP 252
>gi|392537406|ref|ZP_10284543.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
marina mano4]
Length = 376
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 30/276 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T+ QLN + + A+DTE R+ ALIQ+ + L+D +A E+S
Sbjct: 6 IQTQVQLNTFVEQIQNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLA---ELS 62
Query: 172 ILQPF--FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYLL 228
+ + DP V KV H D+ Q+ LFDT A ++L + A ++
Sbjct: 63 LFDFWQVLKDPAVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALMV 122
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+T G+ +K R +W QRPL + L YA D +LL + ++ + +
Sbjct: 123 KTLLGIEIDKSESRTNWLQRPLTTKQLDYAAADTFHLLPCFELIIDRINKA--------- 173
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D F VL+ S + K P E I + +++
Sbjct: 174 DLFEIVLDESEL-------IANKRAFQTPDELLYKDI--------KNAWQLKPHELAVLK 218
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L WR A + +L FVL + + +A + P++
Sbjct: 219 ELAIWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|296536446|ref|ZP_06898543.1| ribonuclease D [Roseomonas cervicalis ATCC 49957]
gi|296263225|gb|EFH09753.1| ribonuclease D [Roseomonas cervicalis ATCC 49957]
Length = 394
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V + T L EL L E F VDTE R++ ++Q++ ++ ++D A +
Sbjct: 13 VLITTTEALAELCARLRTEPFVTVDTEFMRERTYWPELCVVQLAGAEDVAVIDAQAEGLD 72
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L ADP V KVFH + DV F LFDT A V Q S L+
Sbjct: 73 LAPLGELLADPKVTKVFHAARQDVEICILRFGAPPRPLFDTQIAAMVAGFGDQASYDSLV 132
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
G +K + DW RPL + YA D +L + LV L Q+G
Sbjct: 133 RALAGAQIDKAHRFSDWAARPLSPAQINYAAADVTHLRRVYTALVERLTQEGR 185
>gi|387814091|ref|YP_005429574.1| ribonuclease D [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339104|emb|CCG95151.1| ribonuclease D [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 383
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
D+ W+E QL++ L A+DTE + +F L+Q+ + + +LVD +
Sbjct: 15 DTVRWLEAPEQLDQWLGCLDPGIPVALDTEFERVSTFYPIPGLVQLGADGQFWLVDP-EV 73
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
+ + AD K+ + D+ + ++ + D + L+ S+ Y
Sbjct: 74 AEAAGSFRAMLADESRPKLLYAMSEDLELFRHWLNVEPAGVLDL-QIGAALAGAGFSVGY 132
Query: 227 --LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
L+ET G A +K R DW RPL +YA D +L + ++A L+Q+ E++
Sbjct: 133 ARLVETLFGEALDKSATRSDWVSRPLTPAQERYALDDIRFLEPLYGWVLANLRQRNLEHA 192
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
D+ F EA+ + + + +L G +++ Q
Sbjct: 193 LA-DESRRFANEAATQEDP-------------------EQHYLKLRGGW----TLNREQQ 228
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++R L AWR+ R D VL+D +IA+A + P++
Sbjct: 229 AVLRALVAWREQECRRQDRPRNRVLNDGLLIAIAERLPSS 268
>gi|120554530|ref|YP_958881.1| 3'-5' exonuclease [Marinobacter aquaeolei VT8]
gi|120324379|gb|ABM18694.1| 3'-5' exonuclease [Marinobacter aquaeolei VT8]
Length = 383
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 107 DSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIAL 166
D+ W+ET L++ L A+DTE + +F L+Q+ + + +LVD +
Sbjct: 15 DTVRWLETPELLDQWLGGLDPGIPVALDTEFERVSTFYPIPGLVQLGADGQFWLVDP-EV 73
Query: 167 HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY 226
+ + AD K+ + D+ + ++ + D + L+ S+ Y
Sbjct: 74 AEAAGSFRAMLADESRPKLLYAMSEDLELFRHWLNVEPAGVLDL-QIGAALAGAGFSVGY 132
Query: 227 --LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENS 284
L+ET G A +K R DW RPL +YA D +L + ++A L+Q+ E++
Sbjct: 133 ARLVETLFGEALDKSATRSDWVSRPLTPAQERYALDDIRFLEPLYGWVLANLRQRNLEHA 192
Query: 285 YCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ 344
D+ F EA+ + + + +L G +++ Q
Sbjct: 193 LA-DESRRFANEAATQEDP-------------------EQHYLKLRGGW----TLNREQQ 228
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++R L AWR+ R D VL+D +IA+A + P++
Sbjct: 229 AVLRALVAWREQECRRQDRPRNRVLNDGLLIAIAERLPSS 268
>gi|269468831|gb|EEZ80435.1| ribonuclease D [uncultured SUP05 cluster bacterium]
Length = 345
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T +QL + +++ E A+DTE + ++ L+QI+T+K +D + L D
Sbjct: 2 IQTPTQLRDFLHSIKDETELAIDTEFKRVNTYYPVLCLVQIATKKNTDCIDVLTLDDLSP 61
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLET 230
+ + D + + H + D+ L LFDT A +++ P Q S L E+
Sbjct: 62 LFDKLYQDDCLW-IVHSARQDIEALHYLSKQLPKQLFDTQIAASLVNYPAQISYQALTES 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
V K R DW RPLP E ++YA D YLL + L +L+ ++K
Sbjct: 121 LQNVHLEKAYTRLDWTIRPLPDEAIEYALDDVRYLLKNYRQLKTQLE---------VEEK 171
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
++ E + + + + +Y +I+ G S ++ Q +L
Sbjct: 172 STWIEEEGK--SLLDINLYNPDIKDAWQRV-------------KGFSRLAKKYQLKAAQL 216
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIA 376
AWR+ A+ ++ +++LSD +I+
Sbjct: 217 SAWREYQAKKKNKPRKWILSDDKLIS 242
>gi|441508350|ref|ZP_20990274.1| putative ribonuclease [Gordonia aichiensis NBRC 108223]
gi|441447378|dbj|GAC48235.1| putative ribonuclease [Gordonia aichiensis NBRC 108223]
Length = 432
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 30/256 (11%)
Query: 131 FAVDTEQHSLRSFLGFTALIQIS-TEKEDYLVDTIALHDEISILQPFF-ADPGVCKVFHG 188
AVDTE+ S + LIQ+ T +L+D I+ E L P A G V H
Sbjct: 57 IAVDTERASGYRYSQRAYLIQLRRTGAGSFLLDPIS---EPEALAPVIEALDGPEWVLHA 113
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+D D+ L R+ + +FDT A +L +P+ +LA ++ T+ G+ K DW +R
Sbjct: 114 ADQDLPCL-RELGFHCETVFDTELAGRLLGEPKVNLAAMVATHLGLGLQKGHGAADWSRR 172
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PLP + L YA D L+ + + A L + G + +F VL+ R + +
Sbjct: 173 PLPDDWLNYAALDVEVLVELRDAVQAALIEAGKDE--WARQEFQHVLD--RPAPPPRIDR 228
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
+ K ++ + NG+ S+++ VR LC+ R+ +A+ D + +
Sbjct: 229 WRK-----------TANVHTVKNGR----SLAA-----VRELCSAREELAQRRDVAPGRI 268
Query: 369 LSDQAIIALANKAPAN 384
L D AI+ AN P +
Sbjct: 269 LPDSAIVTAANAMPTS 284
>gi|221134772|ref|ZP_03561075.1| ribonuclease D [Glaciecola sp. HTCC2999]
Length = 382
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
S ++ +++ L + +++ AVDTE R+F L+QI + L+D IA
Sbjct: 2 SHPYLLIDSYDALLQYCQQAAQQSVIAVDTEFVRTRTFYPHIGLVQIYDGVDIALIDPIA 61
Query: 166 LHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLA 225
+ D++S L +P V KV H D+ + + LFDT A + L+ S+
Sbjct: 62 I-DDLSPLSQLMTNPQVIKVLHACSEDLETFEFALGVMPEPLFDTQVAAQ-LAGLGNSVG 119
Query: 226 Y--LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
Y L+E + K R DW +RPL E L YA D YLL L +L + ++
Sbjct: 120 YGRLVELLQDITLEKGESRTDWIRRPLSPEQLIYAAEDVLYLLPCYFKLAEKL--EASQQ 177
Query: 284 SYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
+ D+ N ++ +R+N P A + LL +S ++
Sbjct: 178 LHWVYDEVNQLIR-RKRANI------------DPKHA------YLLLKNTWKLSPLNLYA 218
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
L L WR AR HD + F+L +Q++ +A+ P ++ ++
Sbjct: 219 MQL---LAQWRLTFAREHDITQNFILREQSMFDIASCLPGHKGALF 261
>gi|395232376|ref|ZP_10410627.1| ribonuclease D [Enterobacter sp. Ag1]
gi|394733362|gb|EJF32990.1| ribonuclease D [Enterobacter sp. Ag1]
Length = 373
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 37/278 (13%)
Query: 131 FAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
A+DTE R++ LIQ+ ++ L+D +A+ D S + DP K H
Sbjct: 25 LALDTEFVRTRTYYPQLGLIQLYDGQQVSLIDPLAIGD-WSPFKALLQDPDTIKYLHAGS 83
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLETYCGVATNKFLQREDWRQRP 249
D+ F + DT +P A ++E+Y G+A +K R DW RP
Sbjct: 84 EDLEVFLNAFGMLPDPFIDTQILASFTGRPLSCGFATIVESYTGIALDKSESRTDWLARP 143
Query: 250 LPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVY 309
L +YA D YLL IA+ L+AE + G + + L SRR + + +
Sbjct: 144 LTERQCEYAAADVLYLLPIAEKLMAETEAAGWIGAALDECH----LMCSRRRDQLDPEEA 199
Query: 310 TKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVL 369
+EI G + + +++L AWR AR D ++ FV+
Sbjct: 200 WREI--------------------GNAWQLRTRQLACLKKLAAWRLRKARERDMAVNFVV 239
Query: 370 SDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSS 407
++ + +A P + ++D L LS S
Sbjct: 240 REENLWQVARYMPGSL-----------GELDSLGLSGS 266
>gi|339488844|ref|YP_004703372.1| ribonuclease D [Pseudomonas putida S16]
gi|431803860|ref|YP_007230763.1| ribonuclease D [Pseudomonas putida HB3267]
gi|338839687|gb|AEJ14492.1| ribonuclease D [Pseudomonas putida S16]
gi|430794625|gb|AGA74820.1| ribonuclease D [Pseudomonas putida HB3267]
Length = 377
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L E + F AVDTE + +F LIQI + +L+D + + +
Sbjct: 7 WIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGN-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLAELLDDSGVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G+ K R DW QRPL + YA DA +L + L L D
Sbjct: 125 QDVLGIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E+E E+ + ++ ++R
Sbjct: 175 DKYAWVLE----DGAELVAALRREVEP---ESLYRDVKL--------AWKLAPQQLAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D +L + ++ +A P+N
Sbjct: 220 ELCAWREREARNRDVPRNRILKEHSLWPMAKSQPSN 255
>gi|440741870|ref|ZP_20921202.1| ribonuclease D [Pseudomonas syringae BRIP39023]
gi|440378394|gb|ELQ15016.1| ribonuclease D [Pseudomonas syringae BRIP39023]
Length = 377
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D +L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WRLLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLDIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFTILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|359450878|ref|ZP_09240297.1| ribonuclease D [Pseudoalteromonas sp. BSi20480]
gi|358043252|dbj|GAA76546.1| ribonuclease D [Pseudoalteromonas sp. BSi20480]
Length = 376
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 30/276 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T+ QLN + + A+DTE R+ ALIQ+ + L+D +A E+S
Sbjct: 6 IQTQVQLNTFVEQIQNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLA---ELS 62
Query: 172 ILQPF--FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYLL 228
+ + DP V KV H D+ Q+ LFDT A ++L + A ++
Sbjct: 63 LFDFWQVLKDPAVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALMV 122
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+T G+ +K R +W QRPL + L YA D +LL + ++ + +
Sbjct: 123 KTLLGIEIDKSESRTNWLQRPLTTKQLDYAAADTFHLLPCFELIIDRINKA--------- 173
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D F VL+ S + K P E I + +++
Sbjct: 174 DLFEIVLDESEL-------IANKRAFQTPDELLYKDI--------KNAWQLKPHELAVLK 218
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L WR A + +L FVL + + +A + P++
Sbjct: 219 ELAIWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|395447806|ref|YP_006388059.1| ribonuclease D [Pseudomonas putida ND6]
gi|397695883|ref|YP_006533766.1| ribonuclease D [Pseudomonas putida DOT-T1E]
gi|388561803|gb|AFK70944.1| ribonuclease D [Pseudomonas putida ND6]
gi|397332613|gb|AFO48972.1| ribonuclease D [Pseudomonas putida DOT-T1E]
Length = 377
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 123/302 (40%), Gaps = 48/302 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F AVDTE + +F LIQI + +L+D + + + L D GV KV H
Sbjct: 26 FVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGN-WQPLADLLEDSGVVKVLHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R LFDT A L+ S+ Y L++ G+ K R DW Q
Sbjct: 85 SEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLVQEVLGIELPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ +VLE +
Sbjct: 144 RPLSETQVSYAAEDAVHLAELFTVLRPRLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E+E E+ + ++ ++R LCAWR+ AR D
Sbjct: 190 ALRREVEP---ESLYRDVKL--------AWKLAPQQLAVLRELCAWREREARNRDVPRNR 238
Query: 368 VLSDQAIIALANKAPANRTDVYTTIAQADS--------DVDCL----NLSSSLPS---PS 412
+L + ++ +A P N + +A+ D D +CL ++SLP+ P+
Sbjct: 239 ILKEHSLWPMAKSQPNN----LSALAKIDEMHPRTIRQDGECLIQLIKRAASLPAEQWPA 294
Query: 413 PV 414
P+
Sbjct: 295 PL 296
>gi|398846869|ref|ZP_10603820.1| ribonuclease D [Pseudomonas sp. GM84]
gi|398252150|gb|EJN37356.1| ribonuclease D [Pseudomonas sp. GM84]
Length = 377
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 109/276 (39%), Gaps = 29/276 (10%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L E + F AVDTE + +F LIQI + +L+D + ++D
Sbjct: 7 WIRDDQTLAEGCRKWRELPFVAVDTEFMRVDTFYPKAGLIQIGDGQCAFLIDPLLIND-W 65
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
L D GV KV H D+ L R LFDT A L+ S+ Y L+
Sbjct: 66 QPLGDLLDDSGVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLV 124
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ + K R DW QRPL + YA DA +L + L L D
Sbjct: 125 QEVLAIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFSALQPRLS----------D 174
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
DK+ +VLE + +E+E +R + +S ++R
Sbjct: 175 DKYAWVLE----DGAELVAALRREVE--------PETLYRDVK---LAWKLSRQQLAVLR 219
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
LCAWR+ AR D +L + ++ +A P N
Sbjct: 220 ELCAWREREARSRDVPRNRILKEHSLWPMAKMQPDN 255
>gi|352106222|ref|ZP_08961273.1| ribonuclease D [Halomonas sp. HAL1]
gi|350597870|gb|EHA13995.1| ribonuclease D [Halomonas sp. HAL1]
Length = 377
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 30/286 (10%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
+ SF W++T L+ + ++ A+DTE +F ALIQ + +E YL+D +A
Sbjct: 7 TPSFQWLDTPEALDAACDQVADASVIALDTEFFRENTFFPVPALIQFTAGEEAYLIDPVA 66
Query: 166 L--HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK-PQK 222
+ D+ L A K+ H D+ Q + V L DT L + P
Sbjct: 67 VPCTDKFRALLQNRA----IKLLHSCSEDLEVFQHWAGVLPVPLIDTQVVQGFLGENPGM 122
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNE 282
L+E + G K R +W RPL YA D YLL + +L G
Sbjct: 123 GYQKLVEFWVGETLPKEETRSNWLVRPLSPAQCHYAALDVIYLLKVWTLQAEKLTTLGRR 182
Query: 283 NSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
D + ++E + RS Q YT++ + +RLL Q
Sbjct: 183 EWV--DAECASLIEQAGRSVDNDQQWYTRQRQ-----------LWRLLPRQ--------- 220
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ R + WR+ R D +++SD+ + A+A K P+NR ++
Sbjct: 221 -MEAYRLMTTWREGETRRRDLPRNWLISDKLLFAIAEKMPSNRFEL 265
>gi|284006971|emb|CBA72245.1| ribonuclease D [Arsenophonus nasoniae]
Length = 386
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 126/296 (42%), Gaps = 37/296 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T +QL E+ A SK A+DTE ++++ +LIQ+ ++ L+D IA I+
Sbjct: 18 ITTDAQLKEVCQAASKASKIALDTEFVRVKTYYPQLSLIQLYDGEQLSLIDPIA----IT 73
Query: 172 ILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKS-LAYL 227
++PF D V K+ H D+ + DT + P S A L
Sbjct: 74 NMEPFKNLLTDGKVTKILHAGSEDIEVFFHHLACVPQPMLDTQIMAAFVGHPISSGFASL 133
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ Y +A +K R DW RPL + QYA D +LL +A+ +L+Q ++ Y P
Sbjct: 134 VNKYLTIALDKSESRTDWLVRPLSDKQCQYAAADVFFLLPLAE----KLQQLVDKLGYLP 189
Query: 288 --DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQD 345
D+ +L RR + P EA S L Q
Sbjct: 190 AVTDECQRIL--LRRQEILT-----------PAEAYKSIKNSWQLRAQQLAC-------- 228
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDC 401
+++L AWR AR D ++ FV+ ++ + +A P + T++ TI ++ C
Sbjct: 229 -LKQLAAWRLNQARRRDLAINFVVREEHLWKIARYLPNSLTEL-QTIGLTGQEIRC 282
>gi|403737804|ref|ZP_10950532.1| ribonuclease D [Austwickia chelonae NBRC 105200]
gi|403191916|dbj|GAB77302.1| ribonuclease D [Austwickia chelonae NBRC 105200]
Length = 479
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 32/280 (11%)
Query: 112 VETKSQLNELANALSKEFF-FAVDTEQHSLRSFLGFTALIQISTEKE-DYLVDTIALHDE 169
V+ + L E+A AL + AVD E+ S + L+Q+ E +L+D +A D
Sbjct: 101 VDDEQGLAEVAAALRRGAGPIAVDAERASGYRYGQRAYLVQLRREGAGSFLIDPVACPD- 159
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLE 229
++ L P AD V H + D+ L + ++ LFDT + +P+ LA +LE
Sbjct: 160 LTPLNPTLAD--AEWVLHAATQDLPCLA-ELGLHPTRLFDTELGARLAGQPRVGLAAVLE 216
Query: 230 TYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDD 289
Y GV K DW RPLP L+YA D L+ + + +L QG S
Sbjct: 217 HYLGVTLAKEHSAVDWSTRPLPEPWLRYAVLDVEVLVTLRDAVEKDLHDQG--KSEWARQ 274
Query: 290 KFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSI-SSVTQDLVR 348
+F+ + S+ G A + RL G+ I T + R
Sbjct: 275 EFH-------------------ALTSFAGPARRVDPWRRL----SGLHKIRDRRTMAVAR 311
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L RD +AR D S V+ D A++ +A+ P + ++V
Sbjct: 312 ELWFARDDVARSRDISPSRVIPDAALLDIAHALPQSLSEV 351
>gi|386390385|ref|ZP_10075174.1| ribonuclease D [Haemophilus paraphrohaemolyticus HK411]
gi|385693110|gb|EIG23765.1| ribonuclease D [Haemophilus paraphrohaemolyticus HK411]
Length = 372
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 111/285 (38%), Gaps = 30/285 (10%)
Query: 103 LQRSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVD 162
+ S ++WVE + QL E+ + A+DTE R+F LIQ+ K+ L+D
Sbjct: 1 MNSSIHYLWVENEQQLAEVCQNARQVPAVALDTEFIRERTFYPKLGLIQLFDGKQVSLID 60
Query: 163 TIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQ 221
+ D S AD V KV H D+ + F+ L DT L+
Sbjct: 61 PTTIED-FSPFIALLADQNVIKVLHACSEDLEVFECSFNQLPTPLVDTQVMANFLNLGIS 119
Query: 222 KSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
A L+ Y + +K R DW RPL LQYA D YLL I + + EL Q
Sbjct: 120 VGFAKLVLHYLDIELDKGASRTDWLARPLSETQLQYATADVWYLLPIYQKMQTELAQTNW 179
Query: 282 ENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI--FFRLLNGQGGVSSI 339
+N+ N C TK + A I +RL Q V
Sbjct: 180 QNAV----------------NEECSAFLTKREREDDLDKAYIKISNAWRLEPQQLAV--- 220
Query: 340 SSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ L WR AR + +L FV+ + ++ +A P N
Sbjct: 221 -------LKLLAKWRVEEARSRNLALNFVVKEASLYEIARILPKN 258
>gi|292899665|ref|YP_003539034.1| ribonuclease D [Erwinia amylovora ATCC 49946]
gi|291199513|emb|CBJ46630.1| ribonuclease D [Erwinia amylovora ATCC 49946]
Length = 373
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 26/282 (9%)
Query: 108 SFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALH 167
++ + T + L E+ + A+DTE R++ LIQ+ + L+D + +
Sbjct: 2 NYTMITTNAALCEVCQRARQVPALALDTEFVRTRTYYPRLGLIQLYDGETICLIDPLPIT 61
Query: 168 DEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAY 226
D + + D V K H D+ Q +F + + DT +P A
Sbjct: 62 D-WTPFRDLLLDQQVIKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFAT 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
++E++ G+ +K R DW RPL + +YA D YLL IA+ LVAE + G +
Sbjct: 121 IVESFTGIVLDKSESRTDWLARPLSEKQCRYAAADVFYLLPIAEKLVAETEAAGQMAAAL 180
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
+ + L RR++ + K E+Y A A + R L
Sbjct: 181 DECR----LLCQRRTSVL------KPQEAYREIANAWQLRPRQLAA-------------- 216
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+R++ AWR +AR D ++ FV+ ++ + A P + ++
Sbjct: 217 LRQMAAWRLEVAREKDMAVNFVVREENLWKAARFMPGSLAEL 258
>gi|326404838|ref|YP_004284920.1| ribonuclease D [Acidiphilium multivorum AIU301]
gi|325051700|dbj|BAJ82038.1| ribonuclease D [Acidiphilium multivorum AIU301]
Length = 392
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 121/286 (42%), Gaps = 29/286 (10%)
Query: 103 LQRSDSF---VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDY 159
++ S SF V + T L L + L+ E F VDTE +++ ++Q+ +
Sbjct: 1 MKPSPSFPEPVLIATTEALAALCDRLAAEPFVTVDTEFMREKTYFPELCVVQLGGANDVA 60
Query: 160 LVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS- 218
++D A +++ L FA+P V KVFH D+ F LFDT A V
Sbjct: 61 VIDAQAEGLDLAPLGALFANPAVTKVFHACRQDIEIFLLKFGAVPTPLFDTQVAAMVAGF 120
Query: 219 KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQ 278
Q L+ + G +K + DW RPL + YA D +L + + L A L +
Sbjct: 121 GDQVGYDTLVSSLAGGRIDKAHRFSDWSARPLSRAQIAYAAADVTWLRPVYEGLRARLTR 180
Query: 279 QGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSS 338
+G + ++V E + V T E P +A +R L +GG
Sbjct: 181 EG---------RLDWVAEEA----AVLADPATYRTE--PEDA------WRRLKLRGG--- 216
Query: 339 ISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
+ LV+ + AWR+ A + + ++ D+ I LA APA+
Sbjct: 217 -NRRQLALVKAIAAWREREAMRVNVPRQRIVRDEQIPELAALAPAD 261
>gi|322514433|ref|ZP_08067476.1| ribonuclease D [Actinobacillus ureae ATCC 25976]
gi|322119681|gb|EFX91739.1| ribonuclease D [Actinobacillus ureae ATCC 25976]
Length = 371
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
++WV+T +L E+ S++ +DTE +R++ LIQ+ ++ L+D + D
Sbjct: 7 YIWVDTNQKLAEVCQNASQKPAVTLDTEFIRIRTYYPKLGLIQLFDGEQVSLIDPTKIDD 66
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYL 227
++ A+ V KV H D+ Q F L DT + A L
Sbjct: 67 FAPFIE-LLANQQVVKVLHACGEDLEVFQHRFKQLPTPLVDTQIMADFAGIGVSMGFAKL 125
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ Y + +K R DW RPL E LQYA D YLL + + LV +
Sbjct: 126 VAHYLQIELDKGASRTDWLARPLSEEQLQYAAADVWYLLPVYQRLVVD------------ 173
Query: 288 DDKFNFVLEASRRSNTV---CLQVYTKEIESYPGEAAAS---SIFFRLLNGQGGVSSISS 341
L+ +R N V C Q ++ ++ P + A S +RL + Q V +
Sbjct: 174 -------LDVTRWQNAVEEEC-QTLLEKRQNLPNSSKAYKDISNVWRLTSAQLAVLQV-- 223
Query: 342 VTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L WR A D +L FV+ Q + +A P + + +
Sbjct: 224 --------LAKWRMEEAEKRDLALNFVVKGQNLFEIAKLQPKHTSQL 262
>gi|391232023|ref|ZP_10268229.1| ribonuclease D [Opitutaceae bacterium TAV1]
gi|391221684|gb|EIQ00105.1| ribonuclease D [Opitutaceae bacterium TAV1]
Length = 375
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
R SF ++ +QL L A+ + A+DTE ++ + L+Q + + YLVD +
Sbjct: 9 RPPSFQLIDQPAQLAPLLAAIDRVDEVALDTEADNMYHYHTRVCLLQFLVDGDVYLVDLM 68
Query: 165 ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 224
+ + V HGSD D+ L +LFDT A ++L++ + L
Sbjct: 69 PPLPLAPLWEKLSKK---HLVMHGSDFDLRLLHDLCEFRPKSLFDTMLAAQLLNRKRIGL 125
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
A LL + GV +K Q+ +W +RPL A++L YA D +L + L EL + G
Sbjct: 126 AALLSDHFGVTLDKGGQKANWSRRPLTAKLLDYASLDVWHLFELRDILTRELARLGR 182
>gi|119470938|ref|ZP_01613522.1| putative RNase D, processing tRNA precursors [Alteromonadales
bacterium TW-7]
gi|119445960|gb|EAW27240.1| putative RNase D, processing tRNA precursors [Alteromonadales
bacterium TW-7]
Length = 376
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 30/276 (10%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T+ QLN + + A+DTE R+ ALIQ+ + L+D +A E+S
Sbjct: 6 IQTQVQLNTFVEQIQNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLA---ELS 62
Query: 172 ILQPF--FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYLL 228
+ + DP V KV H D+ Q+ LFDT A ++L + A ++
Sbjct: 63 LFDFWQVLKDPAVLKVLHSPSEDIEVFQKYAGFVPAPLFDTQFALQLLGEGNCMGFALMV 122
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+T G+ +K R +W QRPL + L YA D +LL + ++ +
Sbjct: 123 KTLLGIEIDKSESRTNWLQRPLTTKQLDYAAADTFHLLPCFELIIDRINNA--------- 173
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
D F VL+ S + K P E I + +++
Sbjct: 174 DLFEIVLDESEL-------IANKRAFQTPDELLYKDI--------KNAWQLKPHELAVLK 218
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
L WR A + +L FVL + + +A + P++
Sbjct: 219 ELAIWRRNKAIRKNLALNFVLKEHNMTEIAKRGPSS 254
>gi|373853941|ref|ZP_09596739.1| 3'-5' exonuclease [Opitutaceae bacterium TAV5]
gi|372471808|gb|EHP31820.1| 3'-5' exonuclease [Opitutaceae bacterium TAV5]
Length = 375
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 105 RSDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTI 164
R SF ++ +QL L A+ + A+DTE ++ + L+Q + + YLVD +
Sbjct: 9 RPPSFQLIDQPAQLAPLLAAIDRVDEVALDTEADNMYHYHTRVCLLQFLVDGDVYLVDLM 68
Query: 165 ALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 224
+ + V HGSD D+ L +LFDT A ++L++ + L
Sbjct: 69 PPLPLAPLWEKLSKK---HLVMHGSDFDLRLLHDLCEFRPKSLFDTMLAAQLLNRKRIGL 125
Query: 225 AYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGN 281
A LL + GV +K Q+ +W +RPL A++L YA D +L + L EL + G
Sbjct: 126 AALLSDHFGVTLDKGGQKANWSRRPLTAKLLDYASLDVWHLFELRDILTRELGRLGR 182
>gi|338211062|ref|YP_004655113.1| 3'-5' exonuclease [Runella slithyformis DSM 19594]
gi|336304879|gb|AEI47981.1| 3'-5' exonuclease [Runella slithyformis DSM 19594]
Length = 383
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFT-ALIQISTEKEDYLVDTIALHD 168
V ++T+ + ++ LS FA+DTE GFT LIQI+ YL+D ++ D
Sbjct: 5 VMIQTQEEFEKVVKHLSGLEAFAIDTEFDHNHYAYGFTLCLIQIAAPDTCYLIDPFSIPD 64
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVV---NLFDTAKACEVLSKPQKSLA 225
S+ + D KVFH D+ R H++ N+FDT+ A ++LS + L+
Sbjct: 65 LTSLWR-VLEDERSEKVFHDCGEDL----RLLHLHGCSPRNIFDTSVAAKMLSFEKIGLS 119
Query: 226 YLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQG 280
+L GV ++K Q+ +W +RPL L+YA TD +LL + K L+ Q
Sbjct: 120 SVLNELLGVESSKKKQQSNWLKRPLLPLQLEYAATDVIHLLALRKVFAERLQAQN 174
>gi|325277926|ref|ZP_08143467.1| ribonuclease D [Pseudomonas sp. TJI-51]
gi|324096941|gb|EGB95246.1| ribonuclease D [Pseudomonas sp. TJI-51]
Length = 377
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 40/298 (13%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F AVDTE + +F LIQI + +L+D + + + L + GV KV H
Sbjct: 26 FVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPLLIGN-WQPLAELLENSGVVKVLHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R LFDT A L+ S+ Y L++ G+ K R DW Q
Sbjct: 85 SEDLEVLLRLTGKLPQPLFDTQLAAGYLNL-GFSMGYSRLVQEVLGIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ +VLE +
Sbjct: 144 RPLSDTQVSYAAEDAVHLAELFTVLRPRLS----------DDKYAWVLE----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E+E + +R + ++ ++R LCAWR+ AR D
Sbjct: 190 ALRREVE--------PATLYRDVK---LAWKLAPQQLAVLRELCAWRERTARSRDVPRNR 238
Query: 368 VLSDQAIIALANKAPANRT------DVYTTIAQADSD--VDCLNLSSSLPS---PSPV 414
VL + ++ +A P+N + +++ + D + + + ++SLP+ P+P+
Sbjct: 239 VLKEHSLWPIAKNQPSNLSALAKVEEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPL 296
>gi|223995113|ref|XP_002287240.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976356|gb|EED94683.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 743
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Query: 147 TALIQIS--TEKEDYLVDTIA--LHDEI-SILQPFFADPGVCKVFHG-SDNDVMWLQRDF 200
T LIQ++ T +DY++D +A + D I L P F+DP + K+ HG D L RDF
Sbjct: 322 TCLIQMTANTVVKDYVIDPLAPNVWDAIPHYLGPLFSDPRIVKIGHGIGGMDTTSLHRDF 381
Query: 201 HIYVVNLFDTAKACEVLSKPQKS---LAYLLETYCGVATNKF------LQREDWRQRPLP 251
I +VN FDT +A VL +K LA L + Y + Q DWR+RPL
Sbjct: 382 GIVIVNAFDTFEASAVLLHGKKGGLGLAKLCKHYGLPCWQDYANLKSQFQCSDWRKRPLC 441
Query: 252 AEMLQYAQTDAHYLLYIAKCLVAEL 276
+ L+Y + D +L+ I + L+ +L
Sbjct: 442 DDALEYGRYDVRFLITIRQLLLRDL 466
>gi|114704849|ref|ZP_01437757.1| probable ribonuclease d protein [Fulvimarina pelagi HTCC2506]
gi|114539634|gb|EAU42754.1| probable ribonuclease d protein [Fulvimarina pelagi HTCC2506]
Length = 383
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
++T L ALS+ + VDTE +F LIQ++++ + LVD +A +
Sbjct: 4 IKTTEALTRACEALSRSPYVTVDTEFIRETTFWPELCLIQMASDDTEVLVDPLA---KGL 60
Query: 172 ILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
L PFFA D V KVFH + D+ + + + LFDT A V + S+AY
Sbjct: 61 SLDPFFALMADESVVKVFHAARQDLEIVYKLGAVIPKPLFDTQIAAMVCGFGE-SIAYDQ 119
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ +K + DWR RPL + L YA D +L + K L A+L ++ + +S+
Sbjct: 120 LVARLTDGRIDKSSRFTDWRHRPLSDKQLTYALADVTHLRDVYKALKAQL-EETSRHSWL 178
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
D++ + + Q Y + +P +A +R + + + +
Sbjct: 179 -DEEMAILADP---------QTY----DLHPDDA------WRRMK----MRVKKPIELQI 214
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
++ + AWR+ AR +D +L D AI +A + PA+ D+
Sbjct: 215 LKEVAAWREREARSNDRPRGRILKDDAIYEIAQQKPASEADL 256
>gi|374702966|ref|ZP_09709836.1| ribonuclease D [Pseudomonas sp. S9]
Length = 382
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 135/332 (40%), Gaps = 54/332 (16%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
W+ L + + F A+DTE + +F LIQ+S + YL+D + + D
Sbjct: 7 WISDNQGLAQHCEQWQRLGFVALDTEFMRVDTFYPIAGLIQVSEGERAYLIDPLLISD-- 64
Query: 171 SILQPFFA---DPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY- 226
PF A +P V KV H D+ R V LFD+ A L+ S+ Y
Sbjct: 65 --WAPFAALLENPEVIKVVHACSEDLEVFLRLTGSLPVPLFDSQIAAGYLNL-GFSMGYS 121
Query: 227 -LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSY 285
L++ + K R DW +RPL + YA D +L ++ + L A+L
Sbjct: 122 RLVKAVLDIELPKGETRSDWLKRPLSETQVSYAAEDVLHLAHVYRELQAKLS-------- 173
Query: 286 CPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEA-AASSIFFRLLNGQGGVSSISSVTQ 344
+K+ +VLE + +E+E P EA + + ++L Q V
Sbjct: 174 --PEKYQWVLE----DCADMVNHLGREVE--PQEAYREAKLAWKLSRAQLAV-------- 217
Query: 345 DLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRT------DVYTTIAQADSD 398
+R LCAWR+ AR ++ +L + ++ LA P N D++ + D +
Sbjct: 218 --LRELCAWREREARARNQPRNRILREHSLWPLAKTQPDNLQSLARIEDMHPKTVRQDGE 275
Query: 399 V------DCLNLSSS-----LPSPSPVVCSHL 419
D L +S LP P P+ S +
Sbjct: 276 FILQLIKDAAALPASQWPEALPEPLPIEASGI 307
>gi|350552229|ref|ZP_08921434.1| ribonuclease D [Thiorhodospira sibirica ATCC 700588]
gi|349794882|gb|EGZ48690.1| ribonuclease D [Thiorhodospira sibirica ATCC 700588]
Length = 391
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 34/276 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+++ L L L ++ +FA+DTE +++ LIQ++T ++ +D + IS
Sbjct: 7 IDSAEALEALCAHLQQQRWFALDTEFVREKTYYPKLCLIQVATAQQVACIDPL----HIS 62
Query: 172 ILQPFFA---DPGVCKVFHGSDNDV-MWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAY 226
L PF A +P + KV H + D+ ++ D + +FDT A +L Q A
Sbjct: 63 DLSPFLACLHNPAITKVLHAASQDLELFYCLDGRV-PAPIFDTQLAGALLGYGDQAGYAK 121
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+ GV +K + R DW QRPL A L+YA+ D YL + + +L +
Sbjct: 122 LVSAMLGVELDKDMTRTDWSQRPLSAAQLRYAEDDVRYLAQLYPLMHTQLSETRRLEWLA 181
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
D F + EA + ES P +A ++ + G ++ +
Sbjct: 182 SD--FAALSEA-------------RHYESQPAKA------WKRIKGH---QTLRGPQLAV 217
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ L +WR+ A + R++++D ++ +A + P
Sbjct: 218 LASLASWRESEAMRANRPRRWIIADDPLLDMARQQP 253
>gi|416249475|ref|ZP_11636572.1| ribonuclease D [Moraxella catarrhalis CO72]
gi|326575647|gb|EGE25570.1| ribonuclease D [Moraxella catarrhalis CO72]
Length = 407
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 119/295 (40%), Gaps = 30/295 (10%)
Query: 92 PEFDFSNVDLDLQRSDSF--VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
P +F ++ D +WV+ L L + + A+DTE ++ AL
Sbjct: 4 PTLEFPKFTINQAACDGLPTIWVQNDDDLYALIDEIDASDVVALDTEFIKRTTYYPILAL 63
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQI+T YL+D L D Q P + G D + +L + N+FD
Sbjct: 64 IQINTGNAIYLIDAPKL-DLTEFWQALAEVPTMVWYACGEDLGIFYLLAKCPP-LTNIFD 121
Query: 210 TAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
LS K Q + L G+ +K + +W RPL E YA D YLL +
Sbjct: 122 VQIGVAYLSGKLQAGYSQALNEMLGIEIDKGESQSNWLARPLSYEQETYAANDVRYLLKL 181
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
+ + EL +G N VLE SN +++T I++ P E +
Sbjct: 182 YEVVRTELAARG---------ILNCVLE---DSNHYARELHT--IQNQPDEMLYLDLLAP 227
Query: 329 LLN-GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ N Q GV +++L WR+ +AR +E F++S QA+ + P
Sbjct: 228 IYNRRQLGV----------LQQLTIWREALARATNEPRSFIISKQALREIVQDMP 272
>gi|163792851|ref|ZP_02186827.1| Ribonuclease D [alpha proteobacterium BAL199]
gi|159181497|gb|EDP66009.1| Ribonuclease D [alpha proteobacterium BAL199]
Length = 386
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 26/272 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
V + L+ L + L++E + AVDTE +++ L+Q++ E VDT+A +++
Sbjct: 4 VTDTASLSALCDRLARERYVAVDTEFMRDKTYYAKLCLVQLAGADEAVAVDTLAPGIDLA 63
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLLET 230
L A+P V KVFH + DV LFDT A V S L+
Sbjct: 64 PLYALMANPDVLKVFHAARQDVEIFVHQADAVPAPLFDTQIAAMVCGFGDAVSYDRLVRG 123
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
GV +K + DW RPL + ++YA D +L + L +L++ G
Sbjct: 124 LTGVKLDKTSRFTDWSHRPLSSRQIEYALADVIHLRPAYEKLHRKLEKTGR--------- 174
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
LE V T ++ P E + + R S ++R L
Sbjct: 175 ----LEWLSEEMAVLTDTATYKV---PPEQSWRRLKIR---------STKPKFLTVLREL 218
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
AWR+ A+ D +L D A++ +A + P
Sbjct: 219 AAWREREAQARDVPRNRILRDDALVDVAAQTP 250
>gi|237800267|ref|ZP_04588728.1| ribonuclease D [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023124|gb|EGI03181.1| ribonuclease D [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 377
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 122/290 (42%), Gaps = 37/290 (12%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI K +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGKSAWLIDPLLIND-WRPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLDIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYRDA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPANR------TDVYTTIAQADSD--VDCLNLSSSLP 409
++ + ++ LA P N D++ + D + ++ + +SSLP
Sbjct: 239 IVREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIKTASSLP 288
>gi|416158145|ref|ZP_11605584.1| ribonuclease D [Moraxella catarrhalis 101P30B1]
gi|416225038|ref|ZP_11626778.1| ribonuclease D [Moraxella catarrhalis 103P14B1]
gi|416229459|ref|ZP_11628056.1| ribonuclease D [Moraxella catarrhalis 46P47B1]
gi|416242581|ref|ZP_11633617.1| ribonuclease D [Moraxella catarrhalis BC7]
gi|416254805|ref|ZP_11638907.1| ribonuclease D [Moraxella catarrhalis O35E]
gi|326561643|gb|EGE11980.1| ribonuclease D [Moraxella catarrhalis 103P14B1]
gi|326562606|gb|EGE12917.1| ribonuclease D [Moraxella catarrhalis 46P47B1]
gi|326571165|gb|EGE21189.1| ribonuclease D [Moraxella catarrhalis BC7]
gi|326573455|gb|EGE23423.1| ribonuclease D [Moraxella catarrhalis 101P30B1]
gi|326577111|gb|EGE27005.1| ribonuclease D [Moraxella catarrhalis O35E]
Length = 407
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 119/295 (40%), Gaps = 30/295 (10%)
Query: 92 PEFDFSNVDLDLQRSDSF--VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
P +F ++ D +WV+ L L + + A+DTE ++ AL
Sbjct: 4 PTLEFPKFTINQAACDGLPTIWVQNDDDLYALIDEIDASDVVALDTEFIKRTTYYPILAL 63
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQI+T YL+D L D Q P + G D + +L + N+FD
Sbjct: 64 IQINTGNAIYLIDAPKL-DLTEFWQALAEVPTMVWYACGEDLGIFYLLAKCPP-LTNIFD 121
Query: 210 TAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
LS K Q + L G+ +K + +W RPL E YA D YLL +
Sbjct: 122 VQIGVAYLSGKLQAGYSQALNEMLGIEIDKGESQSNWLARPLSYEQETYAANDVRYLLKL 181
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
+ + EL +G N VLE SN +++T I++ P E +
Sbjct: 182 YEVVRTELAARG---------ILNCVLE---DSNHYARELHT--IQNQPDEMLYLDLLAP 227
Query: 329 LLN-GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ N Q GV +++L WR+ +AR +E F++S QA+ + P
Sbjct: 228 IYNRRQLGV----------LQQLTIWREALARATNEPRSFIISKQALREIVQDMP 272
>gi|162146523|ref|YP_001600982.1| ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
gi|209543478|ref|YP_002275707.1| ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
gi|342179222|sp|A9H9B7.1|RND_GLUDA RecName: Full=Ribonuclease D; Short=RNase D
gi|161785098|emb|CAP54642.1| putative Ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
gi|209531155|gb|ACI51092.1| ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
Length = 393
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
V + T L + L +E F ++DTE R++ L+Q++ + E +VDT+A +
Sbjct: 13 VLITTTEDLTGVVERLRREPFVSIDTEFVRERTYWPELCLVQLAGQDEVVVVDTLAPGID 72
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
++ L DP V KVFH + D+ F LFDT A V Q L+
Sbjct: 73 LAPLGVLLDDPEVVKVFHAARQDLEIFLYLFGHLPAALFDTQVAAMVAGFGDQVGYDNLV 132
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ G +K + DW RPL + YA D +L + + L+ L+++G + D
Sbjct: 133 ASLTGAHIDKAHRFSDWSARPLSEAQIAYAAADVTHLRTVYQLLLERLEREGRLDWVASD 192
>gi|421600132|ref|ZP_16043201.1| ribonuclease D [Bradyrhizobium sp. CCGE-LA001]
gi|404267757|gb|EJZ32368.1| ribonuclease D [Bradyrhizobium sp. CCGE-LA001]
Length = 382
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + L + L+K VDTE ++ ++Q+++ +E ++DT+A E
Sbjct: 4 ITTTADLAAACSRLAKHPVITVDTEFLRETTYYPLLCVVQMASPEEAVVIDTLA---EGI 60
Query: 172 ILQPFF---ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
L+PFF + GV KVFH + D+ + +I +FDT A VL S+AY
Sbjct: 61 DLKPFFELMGNEGVLKVFHAARQDIEIIWHQANIIPHPVFDTQVAAMVLGYGD-SIAYDQ 119
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E G +K + DW +RPL E + YA +D +L + L A+LK++
Sbjct: 120 LVEKVTGHRPDKTHRFTDWSRRPLTKEQMHYAVSDVTHLRDVFAALDADLKKR------- 172
Query: 287 PDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
RRS V +++ E+ + P + F + + +DL
Sbjct: 173 ------------RRSEWVSIEM---EVLTSP-----RTYDFHPERAWERLKTRVRKPKDL 212
Query: 347 --VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ + AWR+ A+ D VL D+AI +A AP
Sbjct: 213 AVLMEVAAWREQEAQSRDVPRGRVLRDEAITDIATHAP 250
>gi|359298919|ref|ZP_09184758.1| ribonuclease D [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305636|ref|ZP_10824695.1| ribonuclease D [Haemophilus sputorum HK 2154]
gi|400376749|gb|EJP29636.1| ribonuclease D [Haemophilus sputorum HK 2154]
Length = 370
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 115/282 (40%), Gaps = 28/282 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
++WV++ +L E+ A ++ A+DTE +R+F LIQ+ + L+D + D
Sbjct: 5 YLWVDSNEKLREVCEAARQKKVVALDTEFIRIRTFYPQLGLIQLFDGQTVSLIDPKKIQD 64
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYL 227
S AD V KV H D+ Q F + DT L A L
Sbjct: 65 -FSAFCHLLADEQVIKVLHACSEDLEVFQHRFQQLPTPMIDTQIMAGFLGLGASIGFAKL 123
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ Y + +K R DW RPL L YA D YLL I + ++++ EN + P
Sbjct: 124 VAHYLEIELDKGASRTDWLARPLSEVQLDYAAADVWYLLPIYQ----KMQEAMQENRWMP 179
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDL 346
A R LQ K + P +A S ++L Q V +
Sbjct: 180 ---------AVREECEQLLQKRQKTVN--PNKAYLDISQAWQLTPQQLAVLQV------- 221
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
L WR A+ D +L FV+ +Q++ +A P + +++
Sbjct: 222 ---LAKWRLEEAQKRDLALNFVVKEQSLFEIAKTQPKHTSEL 260
>gi|296113063|ref|YP_003627001.1| ribonuclease D [Moraxella catarrhalis RH4]
gi|416235897|ref|ZP_11630366.1| ribonuclease D [Moraxella catarrhalis 12P80B1]
gi|295920757|gb|ADG61108.1| ribonuclease D [Moraxella catarrhalis BBH18]
gi|326563584|gb|EGE13838.1| ribonuclease D [Moraxella catarrhalis 12P80B1]
Length = 407
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 119/295 (40%), Gaps = 30/295 (10%)
Query: 92 PEFDFSNVDLDLQRSDSF--VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
P +F ++ D +WV+ L L + + A+DTE ++ AL
Sbjct: 4 PTLEFPKFTINQAACDGLPTIWVQNDDDLYALIDEIDASDVVALDTEFIKRTTYYPILAL 63
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQI+T YL+D L D Q P + G D + +L + N+FD
Sbjct: 64 IQINTGNAIYLIDAPKL-DLTEFWQALAEVPTMVWYACGEDLGIFYLLAKCPP-LTNIFD 121
Query: 210 TAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
LS K Q + L G+ +K + +W RPL E YA D YLL +
Sbjct: 122 VQIGVAYLSGKLQAGYSQALNEMLGIEIDKGESQSNWLARPLSYEQETYAANDVRYLLKL 181
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
+ + EL +G N VLE SN +++T I++ P E +
Sbjct: 182 YEVVRTELAARG---------ILNCVLE---DSNHYARELHT--IQNQPDEMLYLDLLAP 227
Query: 329 LLN-GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ N Q GV +++L WR+ +AR +E F++S QA+ + P
Sbjct: 228 IYNRRQLGV----------LQQLTIWREALARATNEPRSFIISKQALREIVQDMP 272
>gi|312172621|emb|CBX80877.1| Ribonuclease D [Erwinia amylovora ATCC BAA-2158]
Length = 369
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 26/278 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + L E+ + A+DTE R++ LIQ+ + L+D + + D +
Sbjct: 2 ITTNAALCEVCQRARQVPALALDTEFVRTRTYYPRLGLIQLYDGETICLIDPLPITD-WT 60
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLET 230
+ D V K H D+ Q +F + + DT +P A ++E+
Sbjct: 61 PFRDLLLDQQVIKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFATIVES 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ G+ +K R DW RPL + +YA D YLL IA+ LVAE + G + + +
Sbjct: 121 FTGIVLDKSESRTDWLARPLSEKQCRYAAADVFYLLPIAEKLVAETEAAGQMAAALDECR 180
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L RR++ + K E+Y A A + R L +R++
Sbjct: 181 ----LLCQRRTSVL------KPQEAYREIANAWQLRPRQLAA--------------LRQM 216
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
AWR +AR D ++ FV+ ++ + A P + ++
Sbjct: 217 AAWRLEVAREKDMAVNFVVREENLWKAARFMPGSLAEL 254
>gi|292488477|ref|YP_003531361.1| ribonuclease D [Erwinia amylovora CFBP1430]
gi|428785421|ref|ZP_19002912.1| ribonuclease D [Erwinia amylovora ACW56400]
gi|291553908|emb|CBA20953.1| Ribonuclease D [Erwinia amylovora CFBP1430]
gi|426276983|gb|EKV54710.1| ribonuclease D [Erwinia amylovora ACW56400]
Length = 369
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 26/278 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T + L E+ + A+DTE R++ LIQ+ + L+D + + D +
Sbjct: 2 ITTNAALCEVCQRARQVPALALDTEFVRTRTYYPRLGLIQLYDGETICLIDPLPITD-WT 60
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLET 230
+ D V K H D+ Q +F + + DT +P A ++E+
Sbjct: 61 PFRDLLLDQQVIKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFATIVES 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
+ G+ +K R DW RPL + +YA D YLL IA+ LVAE + G + + +
Sbjct: 121 FTGIVLDKSESRTDWLARPLSEKQCRYAAADVFYLLPIAEKLVAETEAAGQMAAALDECR 180
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L RR++ + K E+Y A A + R L +R++
Sbjct: 181 ----LLCQRRTSVL------KPQEAYREIANAWQLRPRQLAA--------------LRQM 216
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
AWR +AR D ++ FV+ ++ + A P + ++
Sbjct: 217 AAWRLEVAREKDMAVNFVVREENLWKAARFMPGSLAEL 254
>gi|422651784|ref|ZP_16714576.1| ribonuclease D [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330964859|gb|EGH65119.1| ribonuclease D [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 377
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 46/304 (15%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + +++ + L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLINN-WAPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSDTQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR++ AR +
Sbjct: 190 NLRREVDPYEVYRDAK-LAWKLSRAQLAV----------LRELCAWREVQARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN------------RT-----DVYTTIAQADSDVDCLNLSSSLPS 410
++ + ++ LA P N RT + + Q ++V +LP
Sbjct: 239 IVREHSLWPLAKTQPDNLGALARIEDMHPRTVRHDGEFLLELIQTAANVPAAEWPPALPE 298
Query: 411 PSPV 414
P P+
Sbjct: 299 PLPI 302
>gi|71735861|ref|YP_273799.1| ribonuclease D [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556414|gb|AAZ35625.1| ribonuclease D [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 377
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WQPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFSILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYREA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|256375684|ref|YP_003099344.1| 3'-5' exonuclease [Actinosynnema mirum DSM 43827]
gi|255919987|gb|ACU35498.1| 3'-5' exonuclease [Actinosynnema mirum DSM 43827]
Length = 414
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 128 EFFFAVDTEQHSLRSFLGFTALIQISTEKED-YLVDTIALHDEISILQPFFADPGVCKVF 186
E AVDTE+ S + L+Q+ E LVD IAL + L A G V
Sbjct: 47 EGPVAVDTERASGYRYSQRAYLVQLRREGAGTVLVDPIALGGRLDPL--VEALEGTEWVL 104
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWR 246
H + D+ L + + LFDT A + + +L L+E G K DW
Sbjct: 105 HAASQDLPCLA-ELGLTPSALFDTELAGRLAGFERVALGTLVELLLGYRLEKGHGAADWS 163
Query: 247 QRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCL 306
+RPLPA+ L YA D L+ + L EL+QQG K + LE + T L
Sbjct: 164 RRPLPADWLNYAALDVELLVQLRDVLEEELRQQG---------KLEWALEEFDAARTAPL 214
Query: 307 QVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQ-DLVRRLCAWRDLMARVHDESL 365
E +R + G+ I S Q VR L RD +AR D +
Sbjct: 215 PKPRAEP-------------WRRTS---GIHRIRSTRQLAAVRSLWETRDALARERDLAP 258
Query: 366 RFVLSDQAIIALANKAPAN 384
VL D A++ A + PA+
Sbjct: 259 GRVLPDSALVDAATRNPAD 277
>gi|86749614|ref|YP_486110.1| ribonuclease D [Rhodopseudomonas palustris HaA2]
gi|86572642|gb|ABD07199.1| ribonuclease D [Rhodopseudomonas palustris HaA2]
Length = 382
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ T QL L+ VDTE ++ ++Q+++ E +VDT+A +
Sbjct: 4 ISTTEQLASACTRLASHPVITVDTEFLRETTYYPLLCVVQMASRDEAVVVDTLAPGID-- 61
Query: 172 ILQPFF---ADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
L+PFF A+ V KVFH + D+ + I +FDT A VL S+AY
Sbjct: 62 -LKPFFDLMANENVLKVFHAARQDIEIVWHRAGIVPHPIFDTQVAAMVLGY-GDSIAYDQ 119
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNEN 283
L+E G +K + DW +RPL E L YA +D +L + L A+LKQ+G +
Sbjct: 120 LVERITGHRPDKTHRFTDWSRRPLTDEQLHYAVSDVTHLRDVFAALDADLKQRGRSD 176
>gi|393762499|ref|ZP_10351126.1| ribonuclease D [Alishewanella agri BL06]
gi|392606734|gb|EIW89618.1| ribonuclease D [Alishewanella agri BL06]
Length = 377
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTE---QHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
V T L + ++ A+DTE Q +L LG LIQ+ LVD + + D
Sbjct: 4 VTTNQALADFCRQAIEQPLLALDTEFIRQSTLYPKLG---LIQLYDGSRLALVDPLTITD 60
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYL 227
LQ A GV K+ H D+ L + LFDT A E+L A L
Sbjct: 61 -WQPLQALLAATGVTKILHSCTEDLEALATIGITNIAPLFDTQLAAEILGWGGSMGYARL 119
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+E G +K R DW RPL + L YA D +LL + + L+AEL NS
Sbjct: 120 VEQLTGEVLDKSESRTDWLARPLAQKQLDYAANDVKFLLPVYQRLLAELS-----NS--- 171
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
K +L + + + + P E F+ L + S ++S ++
Sbjct: 172 -TKLALLLAEGQ-------TLMARRQQQLPAE-------FKYLEIKNS-SQLNSRELAIL 215
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
R L +WR A D +L V+ D + LA + PA
Sbjct: 216 RELVSWRYQYASSKDLALGLVVKDAQLFELAKRKPAT 252
>gi|119505873|ref|ZP_01627938.1| ribonuclease D [marine gamma proteobacterium HTCC2080]
gi|119458301|gb|EAW39411.1| ribonuclease D [marine gamma proteobacterium HTCC2080]
Length = 380
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 38/289 (13%)
Query: 111 WVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEI 170
WV + LNE+ +S+E F AVDTE +F ALIQ++ + +L+D + L D+
Sbjct: 11 WVRDTTALNEMVALISQEAFVAVDTEFRRRDTFYPEVALIQLAAAGQCWLLDPLTL-DDT 69
Query: 171 SILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LL 228
LQ F + K+ H + D+ +R + + DT KA +L L+Y L+
Sbjct: 70 QPLQKLFRQTDLIKILHSASEDLEVFERWLGVLPRPMIDTQKAAAMLGL-GFGLSYRDLV 128
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
+ K + DW RPL YA D +L A+C L+ + + Y
Sbjct: 129 HDLLSIDVAKDETQSDWLVRPLTDAQCHYAMQDVTFL---AQCWPI-LEARAEASGY--- 181
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVR 348
+++LE S T K ++ + ++ L++
Sbjct: 182 --LSWILEESAAMVTGGRGPLAKFKSAWKLNSQQLAVLLDLID----------------- 222
Query: 349 RLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADS 397
WR+ AR + ++L D+ I+ LA + P + +A ADS
Sbjct: 223 ----WRESKARDRNRPRNWILHDKVILDLAKRIPTS----MPQLAAADS 263
>gi|359395589|ref|ZP_09188641.1| Ribonuclease D [Halomonas boliviensis LC1]
gi|357969854|gb|EHJ92301.1| Ribonuclease D [Halomonas boliviensis LC1]
Length = 378
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 30/286 (10%)
Query: 106 SDSFVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIA 165
+ S+ W++T L+ ++ A+DTE +F ALIQ + +E YL+D +A
Sbjct: 7 TPSYQWLDTPDALDTACEQVADAAVIALDTEFFRENTFFPVPALIQFTAGEEAYLIDPVA 66
Query: 166 L--HDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSK-PQK 222
+ D+ L K+ H D+ Q + V L DT L + P
Sbjct: 67 VPCTDKFRAL----LQNSAIKLLHACSEDLEVFQYWAGVLPVPLIDTQVVQGFLGENPGM 122
Query: 223 SLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNE 282
L+E + G K R +W RPL YA D YLL + +L G
Sbjct: 123 GYQKLVEFWVGETLPKEETRSNWLVRPLSPAQCHYAALDVIYLLKVWTLQAEKLTTLGRR 182
Query: 283 NSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSV 342
D + +++ + RS LQ YT++ + +RL+ Q
Sbjct: 183 EWV--DAECASLIDQAGRSVDNDLQWYTRQRQ-----------LWRLMPRQ--------- 220
Query: 343 TQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDV 388
+ R + WR+ R D +++SD+ + A+A K P+NR ++
Sbjct: 221 -MEAYRLMTTWREGETRRRDLPRNWLISDKLLFAIAEKMPSNRFEL 265
>gi|257483935|ref|ZP_05637976.1| ribonuclease D [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|416015238|ref|ZP_11562851.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. B076]
gi|416028348|ref|ZP_11571404.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. race 4]
gi|422592336|ref|ZP_16666944.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422683803|ref|ZP_16742060.1| ribonuclease D [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|320325216|gb|EFW81283.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. B076]
gi|320327790|gb|EFW83798.1| ribonuclease D [Pseudomonas syringae pv. glycinea str. race 4]
gi|330989388|gb|EGH87491.1| ribonuclease D [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331013134|gb|EGH93190.1| ribonuclease D [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 377
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WQPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFSILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYREA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|359780230|ref|ZP_09283456.1| ribonuclease D [Pseudomonas psychrotolerans L19]
gi|359371542|gb|EHK72107.1| ribonuclease D [Pseudomonas psychrotolerans L19]
Length = 384
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 118/295 (40%), Gaps = 43/295 (14%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFA---DPGVCKVF 186
F A+DTE + +F LIQI ++ YLVD + + D PF A DP V KV
Sbjct: 26 FIALDTEFMRVDTFYPKAGLIQIGDGEQAYLVDPLCIGD----WTPFAALLEDPAVVKVL 81
Query: 187 HGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQRED 244
H D+ L R L+DT A L S+ Y L+ + K R D
Sbjct: 82 HACSEDLEVLLRLTGSLPQPLYDTQLAAAYLGL-AHSMGYSRLVAEVLKIDIPKDETRSD 140
Query: 245 WRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTV 304
W QRPL +YA D YL+ + L A L Q ++ +D V R S+
Sbjct: 141 WLQRPLTPLQERYAAADVTYLVDVYLYLDARLDDQ--RRAWLLEDGAELVANLRRVSD-- 196
Query: 305 CLQVYTKEIESYPGEAAAS-SIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDE 363
P EA + +RL Q V +R LC WR++ AR D+
Sbjct: 197 ------------PWEAYRDVKLAWRLSRQQLAV----------LRVLCHWREVQARERDQ 234
Query: 364 SLRFVLSDQAIIALANKAPANRT------DVYTTIAQADSDVDCLNLSSSLPSPS 412
VL ++++ LA P ++ D++ + D D ++ +P+
Sbjct: 235 PRNHVLRERSLWPLARFQPTDKQALARIDDMHPRTVRQDGDTLLALIAEGAATPA 289
>gi|418859987|ref|ZP_13414574.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392828353|gb|EJA84048.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
Length = 371
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 119/297 (40%), Gaps = 37/297 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ET L L A+ A+DTE R++ LIQ+ L+D + + D S
Sbjct: 2 IETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISD-WS 60
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLET 230
L+ D G+ K H D+ F L DT +P A ++E
Sbjct: 61 PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEE 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
Y GVA +K R DW RPL +YA D YLL IAK L+ E + G + P
Sbjct: 121 YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAG----WLPAAL 176
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L RR +EI++ P EA ++ + N + + ++ L
Sbjct: 177 DECRLMQQRR----------QEIQA-PEEA-----WWDITNAW----QLRTRQLACLQLL 216
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSS 407
WR AR D ++ FV+ ++ + A+A P + ++D L LS S
Sbjct: 217 ADWRLRKARERDMAVNFVVREENLWAVARYMPGSL-----------GELDSLGLSGS 262
>gi|392545413|ref|ZP_10292550.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
rubra ATCC 29570]
Length = 377
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 26/277 (9%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ +++ +++L+ L+ A+DTE R+ ALIQ+ + L+D ++ D
Sbjct: 3 YQFIQHQTELDAFTAKLADSDVLAIDTEFMRRRTLYPEIALIQVYNGEHLALIDPLSELD 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
S L D + KV H D+ Q+ LFDT A ++L + A +
Sbjct: 63 -FSGLWHLLRDEQIVKVLHSPSEDIEVFQKFAGFVPAPLFDTQFALQLLGEGNCVGFANM 121
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
++ V +K + R DW +RPL A L+YA D YLL + L ++ ++G +
Sbjct: 122 VKMMLDVELDKSMSRTDWLKRPLQASQLEYAAADVFYLLPCYESLSKKIAEKGLSDIVIS 181
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
+ + A R + + P + A ++
Sbjct: 182 ESQLIAQKRAFRTPDAYLYLSVKNVWQLKPRDLA------------------------VL 217
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
R L +WR A + +L FVL +Q ++ +A + P++
Sbjct: 218 RELASWRQSKAEKKNLALNFVLKEQNMVEIAKRRPSS 254
>gi|421493809|ref|ZP_15941163.1| RND [Morganella morganii subsp. morganii KT]
gi|455739242|ref|YP_007505508.1| Ribonuclease D [Morganella morganii subsp. morganii KT]
gi|400191853|gb|EJO24995.1| RND [Morganella morganii subsp. morganii KT]
gi|455420805|gb|AGG31135.1| Ribonuclease D [Morganella morganii subsp. morganii KT]
Length = 381
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 26/274 (9%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ + + L ++ + + A+DTE +R++ L+Q+ + LVD + + D +
Sbjct: 6 ITSDTHLAAYCGQVTGKPYLALDTEFVRIRTYYPHLGLVQLYDGEHLALVDPLGITD-WT 64
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYLLET 230
L+ A P + K H D+ L DT P A L+ET
Sbjct: 65 PLKTLLAAPDMIKYLHAGSEDIEVFFNSMGCVPQPLVDTQVLAAFTGHPLSCGFATLVET 124
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
Y GV +K R DW RPL + +YA D +YLL +A+ L +++ G Y +
Sbjct: 125 YLGVTLDKSESRTDWLARPLTEKQCEYAAADVYYLLPLAEKLTEKVRAAG----YLASAE 180
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
+ A RR ++ P EA +R + G + + +++L
Sbjct: 181 EECAMMAQRRIT-----------QTDPAEA------YRDFS---GAAQLRPQQLACLQKL 220
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
WR AR D ++ FV+ ++ + +A P +
Sbjct: 221 AQWRLEQARQRDMAVNFVVREEHLWKVARYMPTS 254
>gi|422609123|ref|ZP_16681077.1| ribonuclease D [Pseudomonas syringae pv. mori str. 301020]
gi|330894750|gb|EGH27411.1| ribonuclease D [Pseudomonas syringae pv. mori str. 301020]
Length = 377
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQNAWLIDPLLIND-WQPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYREA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|359773330|ref|ZP_09276728.1| putative ribonuclease, partial [Gordonia effusa NBRC 100432]
gi|359309527|dbj|GAB19506.1| putative ribonuclease, partial [Gordonia effusa NBRC 100432]
Length = 427
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 30/260 (11%)
Query: 131 FAVDTEQHSLRSFLGFTALIQIS-TEKEDYLVDTIALHDEISILQPFF-ADPGVCKVFHG 188
AVDTE+ S + LIQ+ T +L+D I H E L P A G + H
Sbjct: 62 IAVDTERASGYKYSARAYLIQLRRTGSGSFLIDPIE-HPEA--LGPIIEALDGPEWILHA 118
Query: 189 SDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQR 248
+D D+ L R+ + L+DT A +L P+ +LA ++ + G+ K DW +R
Sbjct: 119 ADQDLPCL-RELDFHCAALYDTELAGRLLGLPRVNLAAMIAHFLGLGLAKGHGAADWSRR 177
Query: 249 PLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQV 308
PLPA+ L YA D L+ + + + EL G + +F++VL
Sbjct: 178 PLPADWLNYAALDVEVLVELREAIADELAATGKSDWAA--QEFDYVLHRPPSPPRTDRWR 235
Query: 309 YTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFV 368
T I S + Q G+++ VR L R+ MA D + V
Sbjct: 236 RTSNIHS--------------IKTQRGLAT--------VRELWTAREDMAARRDIAPGRV 273
Query: 369 LSDQAIIALANKAPANRTDV 388
L D AI+ A P + +++
Sbjct: 274 LPDSAIVTAATADPKSMSEL 293
>gi|88857337|ref|ZP_01131980.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
tunicata D2]
gi|88820534|gb|EAR30346.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
tunicata D2]
Length = 375
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 31/285 (10%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ +++ +SQL+E A+S + A+DTE R+ ALIQ+ + L+D D
Sbjct: 3 YQYIQEQSQLDEFLQAISTQSVLAIDTEFMRRRTLYPEIALIQVFDGQHLGLIDPCCDLD 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQ-KSLAYL 227
+S +D + KV H DV + I +FDT A +L A +
Sbjct: 63 -LSRFWQIMSDAAILKVLHSPSEDVEVFLKHGCI-PSPIFDTQFALSLLGGANCLGFAIM 120
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+E + G+ +K R +W QRPL A L+YA D YLL + + AE++ G N
Sbjct: 121 VERFLGLTIDKSESRTNWLQRPLSASQLEYAAGDVFYLLPCFEKIRAEIEALGFMNIVIG 180
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSI--FFRLLNGQGGVSSISSVTQD 345
+ + TK P E I ++L Q V
Sbjct: 181 EGDL----------------LVTKRAYQTPDEMLHIDINNSWQLQPAQLAV--------- 215
Query: 346 LVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYT 390
+ +L WR AR + +L F+L + + +A + P + + T
Sbjct: 216 -LNQLAVWRRDKAREKNLALGFILKEPTLFEIARRQPQSMNQLRT 259
>gi|290475404|ref|YP_003468292.1| RNase D, processes tRNA [Xenorhabdus bovienii SS-2004]
gi|289174725|emb|CBJ81524.1| RNase D, processes tRNA precursor [Xenorhabdus bovienii SS-2004]
Length = 385
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 109/277 (39%), Gaps = 32/277 (11%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ + +QL + K A+DTE R++ LIQ+ ++ L+D + +IS
Sbjct: 16 ITSDAQLQSICERAKKHATIALDTEFVRTRTYYPQLGLIQLFDGEQLSLIDPL----DIS 71
Query: 172 ILQPF---FADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQK-SLAYL 227
QPF D V K H D+ F + DT + P A L
Sbjct: 72 EWQPFRELLTDRDVLKFIHAGSEDLEVFWNSFQCLPTPMIDTQVLAAFIGHPMSCGFATL 131
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCP 287
+ Y V +K R DW RPL + +YA D +YLL +A L+A +Q G +
Sbjct: 132 VAQYLHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILMAATEQAGYMGA-AQ 190
Query: 288 DDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLV 347
D+ + L A RR + + K+I G + +
Sbjct: 191 DESY---LIAQRRKEILMPECAYKDI--------------------GNAWQLRPKQLACL 227
Query: 348 RRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++L WR AR D ++ FV+ ++ + +A P +
Sbjct: 228 KKLAGWRLNQARERDLAINFVIREENLWQVARYMPTS 264
>gi|418863385|ref|ZP_13417923.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392833253|gb|EJA88868.1| ribonuclease D [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 371
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 119/297 (40%), Gaps = 37/297 (12%)
Query: 112 VETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEIS 171
+ET L L A+ A+DTE R++ LIQ+ L+D + + D S
Sbjct: 2 IETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISD-WS 60
Query: 172 ILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKP-QKSLAYLLET 230
L+ D G+ K H D+ F L DT +P A ++E
Sbjct: 61 PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEE 120
Query: 231 YCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDK 290
Y GVA +K R DW RPL +YA D YLL IAK L+ E + G + P
Sbjct: 121 YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAG----WLPAAL 176
Query: 291 FNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRL 350
L RR +EI++ P EA ++ + N + + ++ L
Sbjct: 177 DECRLMQQRR----------QEIQA-PEEA-----WWDITNAW----QLRTRQLACLQLL 216
Query: 351 CAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQADSDVDCLNLSSS 407
WR AR D ++ FV+ ++ + A+A P + ++D L LS S
Sbjct: 217 ADWRLRKARERDMAVNFVVREENLWAVARYMPGSL-----------GELDSLGLSGS 262
>gi|388257528|ref|ZP_10134707.1| ribonuclease D [Cellvibrio sp. BR]
gi|387938695|gb|EIK45247.1| ribonuclease D [Cellvibrio sp. BR]
Length = 378
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+W++ QL EL ++ A+DTE +F L+QI K YL+D +A+ +
Sbjct: 8 IWIDQDDQLAELCVRWQQQAALAIDTEFMRSDTFYPIAGLLQIGDGKGCYLIDPLAIGN- 66
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--L 227
+ L+ +P V KV H D+ Q + LFDT A + L Y L
Sbjct: 67 LEPLRELMLNPAVTKVLHSCSEDLEVFQCWLGVVPAPLFDTQVAA-AFAGLGFGLGYANL 125
Query: 228 LETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELK 277
++ + K R DW QRPL A L+YA D ++L + L+ LK
Sbjct: 126 VKNLLTIEIPKEETRSDWLQRPLSAAQLKYAALDVAHMLIVYGKLLQLLK 175
>gi|289628944|ref|ZP_06461898.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651074|ref|ZP_06482417.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. 2250]
gi|422583224|ref|ZP_16658351.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|298159138|gb|EFI00196.1| Ribonuclease D [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330868058|gb|EGH02767.1| ribonuclease D [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 377
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 29/257 (11%)
Query: 130 FFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGS 189
F A+DTE + +F AL+QI + +L+D + ++D L +P V KV H
Sbjct: 26 FVALDTEFMRVDTFYPIAALLQIGDGQSAWLIDPLLIND-WRPLSALLENPDVIKVVHAC 84
Query: 190 DNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY--LLETYCGVATNKFLQREDWRQ 247
D+ L R V LFDT A L+ S+ Y L++ + K R DW Q
Sbjct: 85 SEDLEVLLRLTGSLPVPLFDTQLAAAYLNL-GFSMGYSRLVQEVLNIDLPKGETRSDWLQ 143
Query: 248 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQ 307
RPL + YA DA +L + L L DDK+ ++L+ +
Sbjct: 144 RPLSETQISYAAEDAVHLAELFAILRPRLS----------DDKYAWLLD----DGAELVA 189
Query: 308 VYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRF 367
+E++ Y A + ++L Q V +R LCAWR+ AR +
Sbjct: 190 NLRREVDPYEVYREA-KLAWKLSRAQLAV----------LRELCAWREREARARNLPRNR 238
Query: 368 VLSDQAIIALANKAPAN 384
++ + ++ LA P N
Sbjct: 239 IVREHSLWPLAKTQPDN 255
>gi|118340523|gb|ABK80573.1| putative ribonuclease D [uncultured marine Nitrospinaceae
bacterium]
Length = 386
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 29/278 (10%)
Query: 110 VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHDE 169
+++ T QL + VDTE R++ T LIQ+ + +D IAL D
Sbjct: 1 MYITTTDQLKTFCENIQSADVLVVDTEFVRERTYFHRTGLIQVGGGEHFAAIDPIALPDM 60
Query: 170 ISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLS-KPQKSLAYLL 228
+L+ DP KVFH + D+ L R + +FDT A ++ Q S A ++
Sbjct: 61 TPLLE-LLKDPTKVKVFHAARQDLEILVRFCGQVIPPIFDTQIAAALVGWGTQISFAKIV 119
Query: 229 ETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPD 288
G +K DW +RPL ++YA D YL+ + L+ LK+ G
Sbjct: 120 YKALGKKIHKSETYTDWCRRPLSDSQIEYAIDDVRYLMPVYNKLIERLKKMGR------- 172
Query: 289 DKFNFVLEASRRSNTVCLQVYTKEIESY--PGEAAASSIFFRLLNGQGGVSSISSVTQDL 346
L E+ ++ P A + R + + + S+ +
Sbjct: 173 -----------------LDWVQGEVNAWEDPKTFALPDPYQRFMKIK-NLRSLRPRNLAV 214
Query: 347 VRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPAN 384
++ + AWR+ A D + ++ D+ ++ +A KAP +
Sbjct: 215 LQEIAAWREGEAVKRDCLAKAIIRDETLLEIARKAPRD 252
>gi|410635757|ref|ZP_11346365.1| ribonuclease D [Glaciecola lipolytica E3]
gi|410144840|dbj|GAC13570.1| ribonuclease D [Glaciecola lipolytica E3]
Length = 382
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 34/286 (11%)
Query: 109 FVWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTALIQISTEKEDYLVDTIALHD 168
+ + T LN S AVDTE R+ LIQI LVD + + D
Sbjct: 3 YTLITTFEALNSFCIQASNAPAIAVDTEFVRTRTLYPRLGLIQIYDGVTLVLVDPLGIED 62
Query: 169 EISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAY-- 226
+S L +P V KV H D+ ++ +FDT A +L+K +L Y
Sbjct: 63 -LSPLANLLTNPNVVKVLHSCSEDLETFWHSLNVIPNPIFDTQFAACLLNK-GATLGYAA 120
Query: 227 LLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYC 286
L+E + +K R DW RPL + QYA D YL + EL +Q
Sbjct: 121 LIELMLDIKLDKGESRTDWIARPLSEQQCQYAANDVLYLFQV----YPELHEQ------- 169
Query: 287 PDDKFNFVLEASRRSNTV---CLQVYTKEIESYPGEAAASSIFFRLLNGQGGVSSISSVT 343
+EA R+ V Q+ K+ + P + A + + N +S ++
Sbjct: 170 --------IEALGRTEWVYQEMQQLALKKSVNLPADLA----YLNIKNNW----KLSGLS 213
Query: 344 QDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVY 389
++++L WR AR+ D +L FV+ + ++ +A P ++ ++
Sbjct: 214 LYVLKQLAKWRIEQARIRDLALNFVVRESNLVEIALTLPTHKGAIF 259
>gi|416217690|ref|ZP_11624423.1| ribonuclease D [Moraxella catarrhalis 7169]
gi|416240506|ref|ZP_11632477.1| ribonuclease D [Moraxella catarrhalis BC1]
gi|416246669|ref|ZP_11635127.1| ribonuclease D [Moraxella catarrhalis BC8]
gi|421779889|ref|ZP_16216379.1| ribonuclease D [Moraxella catarrhalis RH4]
gi|326560439|gb|EGE10821.1| ribonuclease D [Moraxella catarrhalis 7169]
gi|326565826|gb|EGE15988.1| ribonuclease D [Moraxella catarrhalis BC1]
gi|326570481|gb|EGE20521.1| ribonuclease D [Moraxella catarrhalis BC8]
gi|407812683|gb|EKF83467.1| ribonuclease D [Moraxella catarrhalis RH4]
Length = 407
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 119/295 (40%), Gaps = 30/295 (10%)
Query: 92 PEFDFSNVDLDLQRSDSF--VWVETKSQLNELANALSKEFFFAVDTEQHSLRSFLGFTAL 149
P +F ++ D +WV+ L L + + A+DTE ++ AL
Sbjct: 4 PTLEFPKFTINQAACDGLPTIWVQNDDDLYALIDEIDASDVVALDTEFIKRTTYYPILAL 63
Query: 150 IQISTEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSDNDVMWLQRDFHIYVVNLFD 209
IQI+T YL+D L D Q P + G D + +L + N+FD
Sbjct: 64 IQINTGNAIYLIDAPKL-DLTEFWQALAEVPIMVWYACGEDLGIFYLLAKCPP-LTNIFD 121
Query: 210 TAKACEVLS-KPQKSLAYLLETYCGVATNKFLQREDWRQRPLPAEMLQYAQTDAHYLLYI 268
LS K Q + L G+ +K + +W RPL E YA D YLL +
Sbjct: 122 VQIGVAYLSGKLQAGYSQALNEMLGIEIDKGESQSNWLARPLSYEQETYAANDVRYLLKL 181
Query: 269 AKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYTKEIESYPGEAAASSIFFR 328
+ + EL +G N VLE SN +++T I++ P E +
Sbjct: 182 YEVVRTELAARG---------ILNCVLE---DSNHYARELHT--IQNQPDEMLYLDLLAP 227
Query: 329 LLN-GQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAP 382
+ N Q GV +++L WR+ +AR +E F++S QA+ + P
Sbjct: 228 IYNRRQLGV----------LQQLTIWREALARATNEPRSFIISKQALREIVQDMP 272
>gi|385652990|ref|ZP_10047543.1| ribonuclease D [Leucobacter chromiiresistens JG 31]
Length = 396
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 29/258 (11%)
Query: 132 AVDTEQHSLRSFLGFTALIQI-STEKEDYLVDTIALHDEISILQPFFADPGVCKVFHGSD 190
AVD E+ S + G L+Q+ E +L+D I + D S LQ D +FH +
Sbjct: 36 AVDAERASGFRYGGEAYLVQVHRAEAGTFLIDPIGIPD-FSPLQRAIGD--AEWIFHAAS 92
Query: 191 NDVMWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYCGVATNKFLQREDWRQRPL 250
D+ L + +FDT A +L + L ++E G+A K DW QRPL
Sbjct: 93 QDLPCLA-SIGLVPSRIFDTELAARLLGFERVGLGAIVEMLLGIALEKAHSAADWSQRPL 151
Query: 251 PAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNTVCLQVYT 310
PAE L+YA D L + + +L +QG K F A++ V L+
Sbjct: 152 PAEWLEYAALDVVLLPELRSVIAEQLDEQG---------KTEF---AAQEFEAVRLRPEK 199
Query: 311 KEIESYPGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLS 370
E +R L+G + + ++ L R L RD +AR D + ++
Sbjct: 200 PRPEEP----------WRKLSGSHALKTPRALA--LARELWEARDALARERDTAPGRLIP 247
Query: 371 DQAIIALANKAPANRTDV 388
D +I+A + P + D+
Sbjct: 248 DSSIVAASIANPRSPGDL 265
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,306,691,443
Number of Sequences: 23463169
Number of extensions: 604519523
Number of successful extensions: 1398755
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 1338
Number of HSP's that attempted gapping in prelim test: 1392512
Number of HSP's gapped (non-prelim): 4435
length of query: 914
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 762
effective length of database: 8,792,793,679
effective search space: 6700108783398
effective search space used: 6700108783398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)