BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002510
(914 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QVS|B Chain B, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
Length = 310
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 24/302 (7%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT E+ ++ A D LF+ L Q +LD M V+ + V+ QG +GD FYV+
Sbjct: 26 HPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNFYVI 85
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G ++++ T++ + V + R SFGELALMYN P A++ A + G LW L
Sbjct: 86 ERGTYDILVTKDNQTRSVGQYDNR------GSFGELALMYNTPRAATIIATSEGSLWGLD 139
Query: 581 REDFRGILMSEFSNLSSL--KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNE 638
R FR I++ + + + SV L L + + + D + E + G+ I+ E
Sbjct: 140 RVTFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYKDGERIIAQGE 199
Query: 639 GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698
+ YII+ G+V I + SN N G Q + K G YFGE
Sbjct: 200 KADSFYIIESGEVSILIRSKTKSNKN------------GGNQEVEIAHCHK--GQYFGEL 245
Query: 699 TLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSI 758
L+ + +A V DV C ++ + F+ ++GP I +N Y + K ++
Sbjct: 246 ALVTNKPRAASAYGVGDVKCLVMDVQAFERLLGPCMDIMK--RNISHYEEQLVKMFGSNL 303
Query: 759 DI 760
D+
Sbjct: 304 DL 305
>pdb|1CX4|A Chain A, Crystal Structure Of A Deletion Mutant Of The Type Ii Beta
Regulatory Subunit Of Camp-Dependent Protein Kinase
Length = 305
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 35/284 (12%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 22 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 81
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 82 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPRAATITATSPGALWGLD 135
Query: 581 REDFRGILMSEFSN--------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
R FR I++ + + SL L+S+++ RL ++ D + ++ G+
Sbjct: 136 RVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVV------DVIGTKVYNDGEQ 189
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEG 692
I+ + + +I++ G+VRIT KSD+ E+ + ++ L G
Sbjct: 190 IIAQGDSADSFFIVESGEVRITMKR---------KGKSDIE-ENGAVEIARCL-----RG 234
Query: 693 SYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
YFGE L+ + +A A+ V C + + F+ ++GP +I
Sbjct: 235 QYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 278
>pdb|3OF1|A Chain A, Crystal Structure Of Bcy1, The Yeast Regulatory Subunit Of
Pka
Length = 246
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 121/265 (45%), Gaps = 37/265 (13%)
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
+E+++ ++FLF KL ++++C++ V G ++KQG +GD FYVV G +
Sbjct: 4 RLEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV 63
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILM 589
+ N P SSFGELALMYN P A+V A ++ +LWAL R FR IL+
Sbjct: 64 NDNKVNSSGPG----------SSFGELALMYNSPRAATVVATSDCLLWALDRLTFRKILL 113
Query: 590 -SEFSN-LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQ 647
S F L LL+S+ +L LT + LAD L + G+TI+ + Y+I+
Sbjct: 114 GSSFKKRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIE 173
Query: 648 RGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGS 707
G V D ++ + + + + YFGE LL +
Sbjct: 174 YGAV-------------------------DVSKKGQGVINKLKDHDYFGEVALLNDLPRQ 208
Query: 708 LTAVAVDDVVCAILTKEKFDLVVGP 732
T A A L K F ++GP
Sbjct: 209 ATVTATKRTKVATLGKSGFQRLLGP 233
>pdb|3TNP|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|E Chain E, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 41/287 (14%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 133 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 192
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 193 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPKAATITATSPGALWGLD 246
Query: 581 REDFRGILMSEFSN--------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
R FR I++ + + SL L+S+++ RL ++ D + ++ G+
Sbjct: 247 RVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVV------DVIGTKVYNDGEQ 300
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS-- 690
I+ + + +I++ G+V+IT K VE++G +VE +
Sbjct: 301 IIAQGDLADSFFIVESGEVKITM-----------KRKGKSEVEENG-------AVEIARC 342
Query: 691 -EGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
G YFGE L+ + +A A+ V C + + F+ ++GP +I
Sbjct: 343 FRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 389
>pdb|3TNQ|A Chain A, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 416
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 41/287 (14%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 133 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 192
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 193 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPKAATITATSPGALWGLD 246
Query: 581 REDFRGILMSEFSN--------LSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
R FR I++ + + SL L+S+++ RL ++ D + ++ G+
Sbjct: 247 RVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEVSERLKVV------DVIGTKVYNDGEQ 300
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKS-- 690
I+ + + +I++ G+V+IT K VE++G +VE +
Sbjct: 301 IIAQGDLADSFFIVESGEVKITM-----------KRKGKSEVEENG-------AVEIARC 342
Query: 691 -EGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736
G YFGE L+ + +A A+ V C + + F+ ++GP +I
Sbjct: 343 FRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEI 389
>pdb|2QCS|B Chain B, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
Length = 291
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 29 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 88
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 89 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 138
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S+D RLT+ AD L V F GQ
Sbjct: 139 SYRRILMGSTLRKRKMYEEF--LSKVSILESLDKWERLTV------ADALEPVQFEDGQK 190
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE- 691
IV E +II G +A V +S+ E VE
Sbjct: 191 IVVQGEPGDEFFIILEG------------SAAVLQRRSE-----------NEEFVEVGRL 227
Query: 692 --GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y+S
Sbjct: 228 GPSDYFGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLGPCSDILK--RNIQQYNS 284
>pdb|1RL3|A Chain A, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RL3|B Chain B, Crystal Structure Of Camp-free R1a Subunit Of Pka
pdb|1RGS|A Chain A, Regulatory Subunit Of Camp Dependent Protein Kinase
Length = 288
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 27 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 86
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 87 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 136
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S+D RLT+ AD L V F GQ
Sbjct: 137 SYRRILMGSTLRKRKMYEEF--LSKVSILESLDKWERLTV------ADALEPVQFEDGQK 188
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE- 691
IV E +II G +A V +S+ E VE
Sbjct: 189 IVVQGEPGDEFFIILEG------------SAAVLQRRSE-----------NEEFVEVGRL 225
Query: 692 --GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y+S
Sbjct: 226 GPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILK--RNIQQYNS 282
>pdb|1NE4|A Chain A, Crystal Structure Of Rp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
pdb|1NE6|A Chain A, Crystal Structure Of Sp-Camp Binding R1a Subunit Of Camp-
Dependent Protein Kinase
Length = 283
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 134/299 (44%), Gaps = 56/299 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 25 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 84
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 85 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 134
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S+D RLT+ AD L V F GQ
Sbjct: 135 SYRRILMGSTLRKRKMYEEF--LSKVSILESLDKWERLTV------ADALEPVQFEDGQK 186
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE- 691
IV E +II G +A V +S+ E VE
Sbjct: 187 IVVQGEPGDEFFIILEG------------SAAVLQRRSE-----------NEEFVEVGRL 223
Query: 692 --GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSS 748
YFGE LL + T VA + C L + +F+ V+GP + I +N + Y+S
Sbjct: 224 GPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILK--RNIQQYNS 280
>pdb|4DIN|B Chain B, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 381
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 137/300 (45%), Gaps = 54/300 (18%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ + +A+ + LF L D++ + D M V AG+ V++QG EGD FYVV
Sbjct: 120 KDYKTMTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQ 179
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V NGE + SFGELAL+Y P A+V+A T+ LW + R+
Sbjct: 180 GEVDVYV-----NGE-----WVTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRD 229
Query: 583 DFRGILMS----------EFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQT 632
+R ILM EF LS + +L S++ RLT+ AD L V F G+
Sbjct: 230 SYRRILMGSTLRKRKMYEEF--LSKVSILESLEKWERLTV------ADALEPVQFEDGEK 281
Query: 633 IVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKS--DLHVEDDGTQSSKELSVEKS 690
IV E YII G A+V +S + +VE S
Sbjct: 282 IVVQGEPGDDFYIITEG------------TASVLQRRSPNEEYVEVGRLGPS-------- 321
Query: 691 EGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDI 750
YFGE LL + T VA + C L + +F+ V+GP ++I +N + Y+S I
Sbjct: 322 --DYFGEIALLLNRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILK--RNIQRYNSFI 377
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 452 QIWVPSSSAHRKTWEEEAHIERALHDHFL-----FRKLTDSQCHVLLDCMQRVEVQAGDI 506
++W ++R+ +R +++ FL L + + D ++ V+ + G+
Sbjct: 222 KLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEK 281
Query: 507 VVKQGGEGDCFYVVGSGEFEVMA--TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPL 564
+V QG GD FY++ G V+ + E+ EV R+ FGE+AL+ N+P
Sbjct: 282 IVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPS------DYFGEIALLLNRPR 335
Query: 565 QASVRAVTNGMLWALKREDFRGIL 588
A+V A L R F +L
Sbjct: 336 AATVVARGPLKCVKLDRPRFERVL 359
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 585 RGILMSEFSNLSSL-KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAAL 643
R ++ ++ +++L K + L + L + S + D + V+ AG+T++
Sbjct: 115 RKVIPKDYKTMTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNF 174
Query: 644 YIIQRGQVRITFDADLLSN 662
Y++ +G+V + + + ++N
Sbjct: 175 YVVDQGEVDVYVNGEWVTN 193
>pdb|3SHR|A Chain A, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
pdb|3SHR|B Chain B, Crystal Structure Of Cgmp-Dependent Protein Kinase Reveals
Novel Site Of Interchain Communication
Length = 299
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 457 SSSAHRKTWEEEAH---IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGE 513
S A RK + E I+ A+ D+ + L SQ ++DCM VE ++K+G
Sbjct: 20 SMQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDV 79
Query: 514 GDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTN 573
G YV+ G+ EV K G ++ T FGELA++YN A+V+ + N
Sbjct: 80 GSLVYVMEDGKVEVT-----KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVN 129
Query: 574 GMLWALKREDFRGILMSE--FSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQ 631
LWA+ R+ F+ I+M + ++ L+SV L LS LAD L E + G+
Sbjct: 130 VKLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGE 189
Query: 632 TIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSE 691
I+ +II +G+V +T +D +
Sbjct: 190 YIIRQGARGDTFFIISKGKVNVT--------------------REDSPNEDPVFLRTLGK 229
Query: 692 GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738
G +FGE L GE + + +A + V C ++ ++ F ++G L +S+
Sbjct: 230 GDWFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSN 276
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 140/302 (46%), Gaps = 62/302 (20%)
Query: 112 KANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVK---RKLCENLLRNNKFHED 167
K N+D F F D+ +F V+DGHG G + F K +LL K E
Sbjct: 134 KENEDRF----DFAQLTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLET 187
Query: 168 -------AVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR-GRTIYVANSGDSRAVL 219
+D SS+ ++L AD + SGTTA L+R G + VA+ GDSRA+L
Sbjct: 188 LLTLAFLEIDKAFSSH----ARLSADATLLT-SGTTATVALLRDGIELVVASVGDSRAIL 242
Query: 220 AERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDG 279
R+GK + L+ID TP R+DE ER+K G V L P V
Sbjct: 243 C-RKGK---PMKLTIDHTPERKDEKERIKKCGGFV----AWNSLGQPHV----------- 283
Query: 280 DPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTN-DHPFFVLASDGVFEF 338
NG A TRSIGD +T GV+A PE +L + D F VL +DG+
Sbjct: 284 --------NGRL---AMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFM 332
Query: 339 LSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHING---LKNTAVN 395
++SQ + D V + DP +A A+ ++ +QY T D+ T +VV KN+ +N
Sbjct: 333 VNSQEICDFVNQCHDPNEAAHAVTEQA----IQYGTE-DNSTAVVVPFGAWGKYKNSEIN 387
Query: 396 QS 397
S
Sbjct: 388 FS 389
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 132/285 (46%), Gaps = 58/285 (20%)
Query: 112 KANQDSFCIHTPFGTSQDD-HFFGVFDGHGEFGAQCSQFVK---RKLCENLLRNNKFHED 167
K N+D F F D+ +F V+DGHG G + F K +LL K E
Sbjct: 20 KENEDRF----DFAQLTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLET 73
Query: 168 -------AVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR-GRTIYVANSGDSRAVL 219
+D SS+ ++L AD + SGTTA L+R G + VA+ GDSRA+L
Sbjct: 74 LLTLAFLEIDKAFSSH----ARLSADATLLT-SGTTATVALLRDGIELVVASVGDSRAIL 128
Query: 220 AERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDG 279
R+GK + L+ID TP R+DE ER+K G V L P V
Sbjct: 129 C-RKGKPM---KLTIDHTPERKDEKERIKKCGGFV----AWNSLGQPHV----------- 169
Query: 280 DPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTN-DHPFFVLASDGVFEF 338
NG A TRSIGD +T GV+A PE +L + D F VL +DG+
Sbjct: 170 --------NGRL---AMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFM 218
Query: 339 LSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIV 383
++SQ + D V + DP +A A+ ++ +QY T + V+V
Sbjct: 219 VNSQEICDFVNQCHDPNEAAHAVTEQA----IQYGTEDNSTAVVV 259
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 77/298 (25%)
Query: 131 HFFGVFDGHGEFGAQCSQFVKRK----LCENLLR-------NNKFHEDAVDACHSSYLTT 179
HFFGV+DGHG G+Q + + + + L E +++ + + E A +S++
Sbjct: 60 HFFGVYDGHG--GSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRV 117
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPF 239
+S++ G+T+V +V I+VAN GDSRAVL RGK +A LS+D P
Sbjct: 118 DSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLC--RGKTPLA--LSVDHKPD 173
Query: 240 REDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRS 299
R+DE R++ +G +V+ W ++ A +RS
Sbjct: 174 RDDEAARIEAAGGKVIR----------------------------WNGARVFGVLAMSRS 205
Query: 300 IGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY-------- 351
IGD + V+ +PE+ + +LASDG+++ ++++ V D+ K
Sbjct: 206 IGDRYLKP-SVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKN 264
Query: 352 ----------------KDPRDACAAIVAESY--RLWLQYETRTDDITVIVVHINGLKN 391
KDP AA+ A Y ++ LQ ++ D+I+V+VV + G++
Sbjct: 265 AMAGEALLPAEKRGEGKDP----AAMSAAEYLSKMALQKGSK-DNISVVVVDLKGIRK 317
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 56/273 (20%)
Query: 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD--------HFFGVFDGHGEFGAQCSQ 148
Y F S G P+ D + + + G+ D HFFGV+DGHG G+Q +
Sbjct: 11 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVAN 68
Query: 149 FVKRK----LCENLLRNNKFHEDA-------VDACHSSYLTTNSQLHADVLDDSMSGTTA 197
+ + + L E + + D A +S+L +S++ + + G+T+
Sbjct: 69 YCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTS 126
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V +V I+VAN GDSRAVL RGK A+ LS+D P REDE R++ +G +V+
Sbjct: 127 VVAVVFPSHIFVANCGDSRAVLC--RGK--TALPLSVDHKPDREDEAARIEAAGGKVIQ- 181
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
W ++ A +RSIGD + ++ +PE+
Sbjct: 182 ---------------------------WNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVT 213
Query: 318 VWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK 350
+ + +LASDGV++ ++ + +M K
Sbjct: 214 AVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 56/273 (20%)
Query: 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD--------HFFGVFDGHGEFGAQCSQ 148
Y F S G P+ D + + + G+ D HFFGV+DGHG G+Q +
Sbjct: 14 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVAN 71
Query: 149 FVKRK----LCENLLR-------NNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTA 197
+ + + L E + + + + E A +S+L +S++ + + G+T+
Sbjct: 72 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTS 129
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V +V I+VAN GDSRAVL RGK A+ LS+D P REDE R++ +G +V+
Sbjct: 130 VVAVVFPSHIFVANCGDSRAVLC--RGK--TALPLSVDHKPDREDEAARIEAAGGKVIQ- 184
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
W ++ A +RSIGD + ++ +PE+
Sbjct: 185 ---------------------------WNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVT 216
Query: 318 VWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK 350
+ + +LASDGV++ ++ + +M K
Sbjct: 217 AVKRVKEDDCLILASDGVWDVMTDEEACEMARK 249
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 56/273 (20%)
Query: 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDD--------HFFGVFDGHGEFGAQCSQ 148
Y F S G P+ D + + + G+ D HFFGV+DGHG G+Q +
Sbjct: 26 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVAN 83
Query: 149 FVKRK----LCENLLR-------NNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTA 197
+ + + L E + + + + E A +S+L +S++ + + G+T+
Sbjct: 84 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTS 141
Query: 198 VTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTL 257
V +V I+VAN GDSRAVL RGK A+ LS+D P REDE R++ +G +V+
Sbjct: 142 VVAVVFPSHIFVANCGDSRAVLC--RGK--TALPLSVDHKPDREDEAARIEAAGGKVIQ- 196
Query: 258 DQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIV 317
W ++ A +RSIGD + ++ +PE+
Sbjct: 197 ---------------------------WNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVT 228
Query: 318 VWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK 350
+ + +LASDGV++ ++ + +M K
Sbjct: 229 AVKRVKEDDCLILASDGVWDVMTDEEACEMARK 261
>pdb|3IDB|B Chain B, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
Length = 161
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 26 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 85
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 86 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPRAATITATSPGALWGLD 139
Query: 581 REDFRGILMSEFSNLSSLKLLRS 603
R FR I++ +N K+ S
Sbjct: 140 RVTFRRIIVK--NNAKKRKMYES 160
>pdb|3IDC|B Chain B, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
Length = 164
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 461 HRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVV 520
H KT ++ ++ A D LF+ L Q +LD M V+ G+ V+ QG +GD FYV+
Sbjct: 32 HPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVI 91
Query: 521 GSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALK 580
G F++ K V R + Y + SFGELALMYN P A++ A + G LW L
Sbjct: 92 DRGTFDIYV----KCDGVGRCVGNY--DNRGSFGELALMYNTPRAATITATSPGALWGLD 145
Query: 581 REDFRGILMS 590
R FR I++
Sbjct: 146 RVTFRRIIVK 155
>pdb|3PVB|B Chain B, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 160
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 35 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 94
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 95 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 144
Query: 583 DFRGILM 589
+R ILM
Sbjct: 145 SYRRILM 151
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 585 RGILMSEFSNLSSL-KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAAL 643
R ++ ++ +++L K + L S L + S + D + VSF AG+T++ +
Sbjct: 30 RKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNF 89
Query: 644 YIIQRGQVRI 653
Y+I +G++ +
Sbjct: 90 YVIDQGEMDV 99
>pdb|3FHI|B Chain B, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
pdb|3IIA|A Chain A, Crystal Structure Of Apo (91-244) Ria Subunit Of
Camp-Dependent Protein Kinase
pdb|3PLQ|A Chain A, Crystal Structure Of Pka Type I Regulatory Subunit Bound
With Rp-8-Br- Camps
pdb|3PNA|A Chain A, Crystal Structure Of Camp Bound (91-244)ria Subunit Of
Camp-Dependent Protein Kinase
pdb|3PNA|B Chain B, Crystal Structure Of Camp Bound (91-244)ria Subunit Of
Camp-Dependent Protein Kinase
Length = 154
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K ++ A + +A+ + LF L D++ + D M V AG+ V++QG EGD FYV+
Sbjct: 28 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 87
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
GE +V E + + SFGELAL+Y P A+V+A TN LW + R+
Sbjct: 88 GEMDVYVNNEWAT----------SVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRD 137
Query: 583 DFRGILM 589
+R ILM
Sbjct: 138 SYRRILM 144
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 585 RGILMSEFSNLSSL-KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAAL 643
R ++ ++ +++L K + L S L + S + D + VSF AG+T++ +
Sbjct: 23 RKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNF 82
Query: 644 YIIQRGQVRI 653
Y+I +G++ +
Sbjct: 83 YVIDQGEMDV 92
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 43 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 102
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 103 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 160
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 161 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 199
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 200 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 247
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 248 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 305
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 306 K-DNISIIVIDLK 317
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 60 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 119
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 120 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 177
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 178 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 216
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 217 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 264
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 265 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 322
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 323 K-DNISIIVIDLK 334
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 58 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 117
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 118 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 175
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 176 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 214
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 215 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 262
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 263 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 320
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 321 K-DNISIIVIDLK 332
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 67 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 126
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 127 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 184
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 185 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 223
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 224 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 271
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 272 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 329
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 330 K-DNISIIVIDLK 341
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG------------EFG-AQCSQFVKRKLCE-NLLRNNKFHED 167
+P T HFFGV+DGHG F A+ + +K +LC+ N + D
Sbjct: 54 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 113
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 114 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 171
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 172 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 210
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 211 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 258
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 259 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 316
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 317 K-DNISIIVIDLK 328
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 127/313 (40%), Gaps = 85/313 (27%)
Query: 122 TPFGTSQDDHFFGVFDGHG--EFGAQCSQFVKRKLCENLLR------------NNKFHED 167
+P T HFFGV+DGHG + C + L E + R + D
Sbjct: 57 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWD 116
Query: 168 AVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYVANSG 213
V S +LT + ++ + + G+TAV LV I V+N G
Sbjct: 117 KVFT--SCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 174
Query: 214 DSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGT 273
DSRAVL RGKE A+ LS+D P REDE R++ +G +V+
Sbjct: 175 DSRAVLF--RGKE--AMPLSVDHKPDREDEYARIENAGGKVIQ----------------- 213
Query: 274 EEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASD 333
W ++ A +RSIGD + V+ PE+ + + +LASD
Sbjct: 214 -----------WQGARVFGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASD 261
Query: 334 GVFEFLSSQAVVDMV-------------------AKYKDPRDACAAIVAESYRLWLQYET 374
G+++ +++Q V ++ K DP AC A L LQ +
Sbjct: 262 GLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDP--ACQAAADYLSMLALQKGS 319
Query: 375 RTDDITVIVVHIN 387
+ D+I++IV+ +
Sbjct: 320 K-DNISIIVIDLK 331
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 116/287 (40%), Gaps = 68/287 (23%)
Query: 132 FFGVFDGHGEFGAQCSQFVK--------------RKLCENLLRNNKFHEDAV----DACH 173
FF V+DGHG GA+ +Q+ RK E L+ DA
Sbjct: 53 FFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIE 110
Query: 174 SSYLTTNSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLS 233
+ + +D SG TAV L+ G+ +YVAN+GDSR V+ R GK A+++S
Sbjct: 111 ELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVC-RNGK---ALEMS 166
Query: 234 IDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG 293
D P E +R++ +G RV ++ G G
Sbjct: 167 FDHKPEDTVEYQRIEKAGGRVTLDGRVNG------------------------------G 196
Query: 294 TAFTRSIGDS--------IAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVV 345
+R+IGD AE + A P+I + + F VLA DG++ F++S+ VV
Sbjct: 197 LNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVV 256
Query: 346 DMVA-KYKDPRDACAAIVAESYRLWLQYETR-----TDDITVIVVHI 386
V + P + I E + L TR D++T I+V
Sbjct: 257 QFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQF 303
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLA-ERRGKEIVAVDLSIDQTP 238
NS L+ VL + SG TA V G ++VAN+GDSRA+L + AV LS D
Sbjct: 186 NSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNA 245
Query: 239 FREDELERVKLSGAR-----VLTLDQIEGLKNP-------------DVQCWGTEEGDDGD 280
E EL+R+KL + V+ D++ GL P D+Q E G D
Sbjct: 246 QNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPD-- 303
Query: 281 PPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLS 340
+T+ I + + A PE+ L F VLA+DG++E +
Sbjct: 304 ---------QLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 341 SQAVVDMVAKYKDPRDACAAIVAESYRLWL 370
Q VV +V +Y I Y++ L
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTL 384
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 180 NSQLHADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLA-ERRGKEIVAVDLSIDQTP 238
NS L+ VL + SG TA V G ++VAN+GDSRA+L + AV LS D
Sbjct: 186 NSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNA 245
Query: 239 FREDELERVKLSGAR-----VLTLDQIEGLKNP-------------DVQCWGTEEGDDGD 280
E E+ER+KL + V+ D++ GL P D+Q E G D
Sbjct: 246 QNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPD-- 303
Query: 281 PPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLS 340
+T+ I + + A PE+ L F VLA+DG++E +
Sbjct: 304 ---------QLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH 354
Query: 341 SQAVVDMVAKYKDPRDACAAIVAESYRLWL 370
Q VV +V +Y I Y++ L
Sbjct: 355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTL 384
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
K SL D + + L + + L+ R + + ++K K+ V L K+V+ ++ LM
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEHTNDERLML 60
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSARFCAASVVAALE 882
S+ + ++ T D+ ++++ L S+L A+F AA V ALE
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 883 DLHKRGVLYRGVSPDVLMLDKSGHLQV 909
LH + ++YR + P+ ++LDK+GH+++
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKI 147
>pdb|3OCP|A Chain A, Crystal Structure Of Camp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OCP|B Chain B, Crystal Structure Of Camp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OD0|A Chain A, Crystal Structure Of Cgmp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OD0|B Chain B, Crystal Structure Of Cgmp Bound Cgmp-Dependent Protein
Kinase(92-227)
pdb|3OGJ|A Chain A, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|B Chain B, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|C Chain C, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
pdb|3OGJ|D Chain D, Crystal Structure Of Partial Apo (92-227) Of
Cgmp-Dependent Protein Kinase
Length = 139
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 463 KTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGS 522
K+ + + I+ A+ D+ + L SQ ++DCM VE ++K+G G YV+
Sbjct: 13 KSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMED 72
Query: 523 GEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKRE 582
G+ EV K G ++ T FGELA++YN A+V+ + N LWA+ R+
Sbjct: 73 GKVEVT-----KEG-----VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQ 122
Query: 583 DFRGILM 589
F+ I+M
Sbjct: 123 CFQTIMM 129
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 783 SEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842
E+ LV + S+ ++K SK ++ +E+++M + + S V Q+ C D
Sbjct: 89 GEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLFCAFQDD 147
Query: 843 MHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901
+ +++ L +++ + + E+ A+F A VV AL+ +H G+++R V PD ++L
Sbjct: 148 KYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 207
Query: 902 DKSGHLQV 909
DK GHL++
Sbjct: 208 DKHGHLKL 215
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 69/351 (19%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
LRY S +G+ ++ + + I P G + FF V+DGH G+Q +++ L
Sbjct: 22 LRYGLSSMQGW---RVEMEDAHTAVIGLPSGL-ESWSFFAVYDGHA--GSQVAKYCCEHL 75
Query: 155 CENLLRNNKFH--------EDAVDACHSSYLTTNSQLHADVLDDSM-----SGTTAVTVL 201
+++ N F E+ + + +L + H V+ + SG+TAV VL
Sbjct: 76 LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDE--HMRVMSEKKHGADRSGSTAVGVL 133
Query: 202 VRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIE 261
+ + Y N GDSR +L R + D P E ER++ +G V+ + ++
Sbjct: 134 ISPQHTYFINCGDSRGLLCRNRKVHF----FTQDHKPSNPLEKERIQNAGGSVM-IQRVN 188
Query: 262 GLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIG--------VVAN 313
G A +R++GD + + V
Sbjct: 189 G------------------------------SLAVSRALGDFDYKCVHGKGPTEQLVSPE 218
Query: 314 PEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQY 372
PE+ E + D F +LA DG+++ + ++ + D V + D + E L Y
Sbjct: 219 PEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-Y 277
Query: 373 ETRTDDITVIVV---HINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESP 420
+ D+++VI++ + + AV + +L V ++I+ G P
Sbjct: 278 KGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVP 328
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 65/296 (21%)
Query: 77 FLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVF 136
FL + A LRY S +G+ + D + + P G +D FF V+
Sbjct: 6 FLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDA---HTAVVGIPHGL-EDWSFFAVY 61
Query: 137 DGHGEFGAQCSQFVKRKLCENLLRNNKFH-------------EDAVDACHSSYLTTNSQL 183
DGH G++ + + L E++ N F E+ + + +L + +
Sbjct: 62 DGHA--GSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYM 119
Query: 184 -HADVLDDSM--SGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFR 240
+ L + M SG+TAV V++ + IY N GDSRAVL R G+ + D P
Sbjct: 120 RNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLY-RNGQVCFSTQ---DHKPCN 175
Query: 241 EDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSI 300
E ER++ +G V+ + ++ G A +R++
Sbjct: 176 PREKERIQNAGGSVM-IQRVNG------------------------------SLAVSRAL 204
Query: 301 GDSIAETIG------VVANPEIVVWEL--TNDHPFFVLASDGVFEFLSSQAVVDMV 348
GD + + + +PE V+E+ + F +LA DG+++ +S++ + + V
Sbjct: 205 GDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYV 260
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 140/351 (39%), Gaps = 69/351 (19%)
Query: 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKL 154
LRY S +G+ ++ + + I P G + FF V+DGH G+Q +++ L
Sbjct: 22 LRYGLSSMQGW---RVEMEDAHTAVIGLPSGL-ESWSFFAVYDGHA--GSQVAKYCCEHL 75
Query: 155 CENLLRNNKFH--------EDAVDACHSSYLTTNSQLHADVLDDSM-----SGTTAVTVL 201
+++ N F E+ + + +L + H V+ + SG+TAV VL
Sbjct: 76 LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDE--HMRVMSEKKHGADRSGSTAVGVL 133
Query: 202 VRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIE 261
+ + Y N GDSR +L R + D P E ER++ +G V+ + ++
Sbjct: 134 ISPQHTYFINCGDSRGLLCRNRKVHF----FTQDHKPSNPLEKERIQNAGGSVM-IQRVN 188
Query: 262 GLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIG--------VVAN 313
G A +R++GD + + V
Sbjct: 189 G------------------------------SLAVSRALGDFDYKCVHGKGPTEQLVSPE 218
Query: 314 PEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQY 372
PE+ E + D F +LA DG+++ + ++ + D V + D + E L Y
Sbjct: 219 PEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-Y 277
Query: 373 ETRTDDITVIVV---HINGLKNTAVNQSIPPGVFLRTPVPQVIEVTGSESP 420
+ D+++VI++ + + AV + +L V ++I+ G P
Sbjct: 278 KGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVP 328
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
++ D E K + E+ LV + + ++K SK ++ +E+++M
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM- 128
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALED 883
+ + S V Q+ D + +++ L +++ + + E+ ARF A VV AL+
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 884 LHKRGVLYRGVSPDVLMLDKSGHLQV 909
+H G ++R V PD ++LDKSGHL++
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKL 214
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
++ D E K + E+ LV + + ++K SK ++ +E+++M
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM- 123
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALED 883
+ + S V Q+ D + +++ L +++ + + E+ ARF A VV AL+
Sbjct: 124 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 183
Query: 884 LHKRGVLYRGVSPDVLMLDKSGHLQV 909
+H G ++R V PD ++LDKSGHL++
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKL 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
++ D E K + E+ LV + + ++K SK ++ +E+++M
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM- 128
Query: 825 SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL-HTPLDEQSARFCAASVVAALED 883
+ + S V Q+ D + +++ L +++ + + E+ ARF A VV AL+
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 884 LHKRGVLYRGVSPDVLMLDKSGHLQV 909
+H G ++R V PD ++LDKSGHL++
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKL 214
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLIIDQQGYIQV 182
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 106
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 167 DLKPENLLIDQQGYIQV 183
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 126
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 187 DLKPENLLIDQQGYIQV 203
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 92
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 153 DLKPENLLIDEQGYIQV 169
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 100
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 161 DLKPENLLIDQQGYIQV 177
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 126
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 187 DLKPENLLIDQQGYIQV 203
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQ 834
K L + + LV ++S N ++K KQKV L + L EK ++++V+ V +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV-K 105
Query: 835 ILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLHKRGVLYR 892
+ + D+ + +++ + S L E ARF AA +V E LH ++YR
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 893 GVSPDVLMLDKSGHLQV 909
+ P+ L++D+ G++QV
Sbjct: 166 DLKPENLLIDQQGYIQV 182
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV 183
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV 183
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 93 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQV 175
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV 183
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 121 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQV 203
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQV 182
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 93 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQV 175
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV +++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKV 183
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQV 182
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 86 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQV 168
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV 183
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV 183
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV 182
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G++QV
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV 183
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKV 182
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKV 182
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKV 182
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 269
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 906 HLQV 909
H+++
Sbjct: 330 HVRI 333
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 211 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 268
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 269 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 328
Query: 906 HLQV 909
H+++
Sbjct: 329 HVRI 332
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 269
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 906 HLQV 909
H+++
Sbjct: 330 HVRI 333
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 792 DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851
D+ ++K K+++K E L E+ ++ VS C P I+C + + H L+
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCM-SYAFHTPDKLSF 269
Query: 852 YLACPLASILHTPLD------EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905
L LH L E RF AA ++ LE +H R V+YR + P ++LD+ G
Sbjct: 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329
Query: 906 HLQV 909
H+++
Sbjct: 330 HVRI 333
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
+ ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKV 183
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
+ ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKV 183
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Query: 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLM 823
AKV++ D ++ K L ++ LV + + + ++K K+ + + + E ++
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 824 KSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP----LDEQSARFCAASVVA 879
++ A H L A H E+ ARF A +V+
Sbjct: 63 QNTRHPFLTA---LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS 119
Query: 880 ALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
ALE LH R V+YR + + LMLDK GH+++
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIKI 149
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K L + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
+ ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ LM+D+ G+++V
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKV 183
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E + L + + LV +++ N ++K KQKV L + L EK + ++V+
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + ++L + S L E ARF AA +V E LH
Sbjct: 101 FPFLV-KLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G+++V
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKV 183
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K + + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G+++V
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKV 182
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+++
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+++
Sbjct: 109 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 151
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K + + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G+++V
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKV 182
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+++
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+++
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS 827
L E K + + + LV ++ N ++K KQKV L + L EK ++++V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 828 PSACVPQILCTCADSMHAGLLLNTYLACPLASILHT--PLDEQSARFCAASVVAALEDLH 885
V ++ + D+ + +++ + S L E ARF AA +V E LH
Sbjct: 100 FPFLV-KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 886 KRGVLYRGVSPDVLMLDKSGHLQV 909
++YR + P+ L++D+ G+++V
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKV 182
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+++
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ ARF A +V+ALE LH R V+YR + + LMLDK GH+++
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829
D E K + SE+ +V ++ + ++K +K + G EV +E+ +
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRG-EVSCFREERDVLVNGDR 120
Query: 830 ACVPQILCTCADSMHAGLLLNTYLACPLASILHT---PLDEQSARFCAASVVAALEDLHK 886
+ Q+ D + L++ Y+ L ++L + + ARF A +V A++ +H+
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 887 RGVLYRGVSPDVLMLDKSGHLQV 909
G ++R + PD ++LD+ GH+++
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRL 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ-VLKEKNLM 823
K+ + D E K L ++ L + + F ++K K+ V + +V+ + EK ++
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 72
Query: 824 KSVSPSACVPQILCT---------CADSMHAGLLLNTYLACPLASILHTPLDEQSARFCA 874
+ + CT + ++ G L+ +C D A F A
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-------HKFDLSRATFYA 125
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
A ++ L+ LH +G++YR + D ++LDK GH+++
Sbjct: 126 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI 160
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 719 AILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLY 778
A+ + D++V T+ SH Y ++ + + ++ D E K +
Sbjct: 40 ALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIG 99
Query: 779 STDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838
E+ +V ++++E ++K +K ++ + +E++++ + + +
Sbjct: 100 RGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITALHYA 158
Query: 839 CADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
D H L+++ Y+ L ++L L E ARF +V A++ +H+ ++R +
Sbjct: 159 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIK 218
Query: 896 PDVLMLDKSGHLQV 909
PD ++LD +GH+++
Sbjct: 219 PDNVLLDVNGHIRL 232
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 719 AILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDMEWRKCLY 778
A+ + D++V T+ SH Y ++ + + ++ D E K +
Sbjct: 24 ALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIG 83
Query: 779 STDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838
E+ +V ++++E ++K +K ++ + +E++++ + + +
Sbjct: 84 RGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITALHYA 142
Query: 839 CADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVS 895
D H L+++ Y+ L ++L L E ARF +V A++ +H+ ++R +
Sbjct: 143 FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIK 202
Query: 896 PDVLMLDKSGHLQV 909
PD ++LD +GH+++
Sbjct: 203 PDNVLLDVNGHIRL 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 753 KPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGK 812
K I ++S ++ + + E+ + L ++ L ++++ + ++K K +
Sbjct: 7 KEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD 66
Query: 813 EVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSA 870
+ EK ++ + Q+ C ++ L + DE A
Sbjct: 67 VECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA 126
Query: 871 RFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
RF AA +++AL LH +G++YR + D ++LD GH ++
Sbjct: 127 RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKL 165
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ-VLKEKNLM 823
K+ + D K L ++ L + + F ++K K+ V + +V+ + EK ++
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 71
Query: 824 KSVSPSACVPQILCT---------CADSMHAGLLLNTYLACPLASILHTPLDEQSARFCA 874
+ + CT + ++ G L+ +C D A F A
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-------HKFDLSRATFYA 124
Query: 875 ASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
A ++ L+ LH +G++YR + D ++LDK GH+++
Sbjct: 125 AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI 159
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEK 820
++A+V++ + E+ K L ++ LV + + + ++K K+ + + L E
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 821 NLMK--------SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARF 872
+++ ++ S LC + + G L + + E ARF
Sbjct: 61 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVF----SEDRARF 113
Query: 873 CAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQV 909
A +V+AL+ LH ++ V+YR + + LMLDK GH+++
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI 151
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829
D E K + E+ +V L++++ ++K +K ++ + +E++++ + S
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDS 133
Query: 830 ACVPQILCTCADSMHAGLLLNTYLACPLASIL---HTPLDEQSARFCAASVVAALEDLHK 886
+ + D + L+++ Y+ L ++L L E+ ARF A +V A++ +H+
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 887 RGVLYRGVSPDVLMLDKSGHLQV 909
++R + PD +++D +GH+++
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRL 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
L E+ ARF +A + AL LH+RG++YR + D ++LD GH+++
Sbjct: 150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL 194
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 170
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 126 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 170
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 148
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 150
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 151
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 149
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 111 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 155
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
L E+ ARF +A + AL LH+RG++YR + D ++LD GH+++
Sbjct: 103 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL 147
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
L E+ ARF +A + AL LH+RG++YR + D ++LD GH+++
Sbjct: 118 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL 162
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 66/254 (25%)
Query: 124 FGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDA---------VDAC 172
F + + +GVF+G+ G + + FV ++L LL N H +A D
Sbjct: 58 FRSENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVV 115
Query: 173 HSSYLTTNSQLHAD----------VLDDSMSG-TTAVTVLVRGRTIYVANSGDSRAVLAE 221
S+L + A+ L+ +SG AV ++ +YVAN G +RA+L +
Sbjct: 116 ERSFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCK 175
Query: 222 RRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDP 281
+ L++D T EDEL R+ G + Q+
Sbjct: 176 STVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV--------------------- 214
Query: 282 PRLWVPNGMYPGTAFTRSIGD-------------SIAETIGVVANPEI-VVWELTNDHPF 327
G+ G TR IGD S A++ ++A PEI L F
Sbjct: 215 -------GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 267
Query: 328 FVLASDGVFEFLSS 341
VL S+G+++ L +
Sbjct: 268 LVLMSEGLYKALEA 281
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 171
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
L E+ ARF +A + AL LH+RG++YR + D ++LD GH+++
Sbjct: 107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL 151
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 173
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 171
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 171
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 127 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 171
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 173
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 174
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 134 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 178
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 173
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 130 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 174
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 173
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 173
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 132 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 176
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
DE RF A +V+ALE LH +G+++R + P+ ++L++ H+Q+
Sbjct: 129 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 173
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 736 ISHDDQNSKDYSSDIPKKPAKSIDIS-SLAK----VSLTDMEWRKCLYSTDCSEIGLVLL 790
+ ++ D+ S P + + ++ SLAK V++ + E+ K L ++ LV
Sbjct: 113 LKKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKE 172
Query: 791 RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK--------SVSPSACVPQILCTCADS 842
+ + + ++K K+ + + L E +++ ++ S LC +
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 232
Query: 843 MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLML 901
+ G L + + E ARF A +V+AL+ LH ++ V+YR + + LML
Sbjct: 233 ANGGEL---FFHLSRERVF----SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 902 DKSGHLQV 909
DK GH+++
Sbjct: 286 DKDGHIKI 293
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 745 DYSSDIPKKPAKSIDIS-SLAK----VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSL 799
D+ S P + + ++ SLAK V++ + E+ K L ++ LV + + + ++
Sbjct: 119 DFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAM 178
Query: 800 KRFSKQKVKCLGKEVQVLKEKNLMK--------SVSPSACVPQILCTCADSMHAGLLLNT 851
K K+ + + L E +++ ++ S LC + + G L
Sbjct: 179 KILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--- 235
Query: 852 YLACPLASILHTPLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQV 909
+ + E ARF A +V+AL+ LH ++ V+YR + + LMLDK GH+++
Sbjct: 236 FFHLSRERVF----SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI 290
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLM 823
++V++ + E+ K L ++ LV + + + ++K K+ + + L E ++
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 824 K--------SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAA 875
+ ++ S LC + + G L + + E ARF A
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVF----SEDRARFYGA 115
Query: 876 SVVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQV 909
+V+AL+ LH ++ V+YR + + LMLDK GH+++
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI 150
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F AA + LEDLH+ ++YR + P+ ++LD GH+++
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI 327
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F AA + LEDLH+ ++YR + P+ ++LD GH+++
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI 327
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMK 824
+V++ + E+ K L ++ LV + + + ++K K+ + + L E +++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 825 --------SVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAAS 876
++ S LC + + G L + + E ARF A
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVF----SEDRARFYGAE 118
Query: 877 VVAALEDLH-KRGVLYRGVSPDVLMLDKSGHLQV 909
+V+AL+ LH ++ V+YR + + LMLDK GH+++
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI 152
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEK 820
SS +D + K + ++ L + E F ++K K+ + +E ++ E+
Sbjct: 30 SSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 821 N-LMKSVS-PSACVPQILCTCADSMHAGLLLNTYLACPLASILHTP--LDEQSARFCAAS 876
N L+K+V P AD ++ +L+ L L E ARF AA
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLY--FVLDYINGGELFYHLQRERCFLEPRARFYAAE 147
Query: 877 VVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
+ +AL LH ++YR + P+ ++LD GH+
Sbjct: 148 IASALGYLHSLNIVYRDLKPENILLDSQGHI 178
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F AA + L LHKRG++YR + D +MLD GH+++
Sbjct: 117 FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKI 161
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH+++
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 167
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH+++
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 167
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ +F A + AL+ LH G++YR + P+ ++LD+ GH+++
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 168
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 40/299 (13%)
Query: 112 KANQDSFCIHTPFGTSQDD-HFFGVFDGH-GEFGAQCSQFVKRKLCENLLRNNKFHE--- 166
K +D F + +DD FFGVFDG G+F S+ VK + L+ + + E
Sbjct: 34 KHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDF---ASENVKDLVVPQLISSPAWQEVTE 90
Query: 167 --------DAVD---------ACHSSYLTTNSQL--HADVLDDSMSGTTAVTVLVRGRTI 207
VD A Y +++L + L+ + +T+VT ++ +
Sbjct: 91 XLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFV 150
Query: 208 YVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPD 267
V + GDSR + L++D P E R+ +G V E L N +
Sbjct: 151 AVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSV------EYLHNHN 204
Query: 268 VQCWGTEEGDDGDPPRLWVPNGMYPGT-AFTRSIGDSIAETIGVVANPEIVVWELTNDHP 326
+ + GD G P ++R+ G + G+ P++ V +T H
Sbjct: 205 NKPF-IRGGDFS----FRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHR 259
Query: 327 FFVLASDGVFEFLSSQAVVDMVAKYK-DPRDACAAIVAESYRLWLQYETRTDDITVIVV 384
+LA+DG+++ S+ V++ + + + R+ A+V + D+IT V
Sbjct: 260 VXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQALVEXTLAEQQSRNQSADNITAXTV 318
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 784 EIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS- 842
++ +V D++ ++K +KQK + V KE +M+ + V + + D
Sbjct: 30 KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV-NLWYSFQDEE 88
Query: 843 ---MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899
M LLL L L +H E++ + +V AL+ L + +++R + PD +
Sbjct: 89 DMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNI 146
Query: 900 MLDKSGHLQV 909
+LD+ GH+ +
Sbjct: 147 LLDEHGHVHI 156
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 85/273 (31%)
Query: 124 FGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDA---------VDAC 172
F + + +GVF+G+ G + + FV ++L LL N H +A D
Sbjct: 56 FRSENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVV 113
Query: 173 HSSYLTT-----------NSQLHADV------------------LDDSMSG-TTAVTVLV 202
S+L + SQL V L+ +SG AV ++
Sbjct: 114 ERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVL 173
Query: 203 RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEG 262
+YVAN G +RA+L + + L++D T EDEL R+ G + Q+
Sbjct: 174 LNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV-- 231
Query: 263 LKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD-------------SIAETIG 309
G+ G TR IGD S A++
Sbjct: 232 --------------------------GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKP 265
Query: 310 VVANPEI-VVWELTNDHPFFVLASDGVFEFLSS 341
++A PEI L F VL S+G+++ L +
Sbjct: 266 IIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEA 298
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 85/273 (31%)
Query: 124 FGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN--NKFHEDA---------VDAC 172
F + + +GVF+G+ G + + FV ++L LL N H +A D
Sbjct: 58 FRSENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVV 115
Query: 173 HSSYLTT-----------NSQLHADV------------------LDDSMSG-TTAVTVLV 202
S+L + SQL V L+ +SG AV ++
Sbjct: 116 ERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVL 175
Query: 203 RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEG 262
+YVAN G +RA+L + + L++D T EDEL R+ G + Q+
Sbjct: 176 LNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQV-- 233
Query: 263 LKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD-------------SIAETIG 309
G+ G TR IGD S A++
Sbjct: 234 --------------------------GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKP 267
Query: 310 VVANPEI-VVWELTNDHPFFVLASDGVFEFLSS 341
++A PEI L F VL S+G+++ L +
Sbjct: 268 IIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEA 300
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E +A F A + AL LH++G++YR + P+ +ML+ GH+++
Sbjct: 120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKL 162
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E +A F A + AL LH++G++YR + P+ +ML+ GH+++
Sbjct: 120 EDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKL 162
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F A +V+ LE LH+R ++YR + P+ ++LD G++++
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRI 330
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E+ +F A + L+ LH G++YR + P+ ++LD+ GH+++
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKL 171
>pdb|4EV0|A Chain A, Crystal Structure Of Thermus Thermophilus Catabolite
Activator Protein
pdb|4EV0|D Chain D, Crystal Structure Of Thermus Thermophilus Catabolite
Activator Protein
Length = 216
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF L + + L QR G + QG G Y+V SG+ + T G
Sbjct: 6 LFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHL---GGQE 62
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
R L +L FGE++L+ AS AV + L AL RED+ ++
Sbjct: 63 RTLALLGPGEL--FGEMSLLDEGERSASAVAVEDTELLALFREDYLALI 109
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 692 GSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHD 739
G FGE +LL E S +AVAV+D L +E + ++ L ++H+
Sbjct: 71 GELFGEMSLLDEGERSASAVAVEDTELLALFREDYLALIRRLPLVAHN 118
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
PL E ARF ++ +E LH + +++R + P L++ + GH+++
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKI 178
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 867 EQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907
E + +V ALE LHK G++YR + + ++LD +GH+
Sbjct: 158 EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHV 198
>pdb|3CO2|A Chain A, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
pdb|3CO2|B Chain B, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
pdb|3CO2|C Chain C, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
pdb|3CO2|D Chain D, Mlotik1 Ion Channel Cyclic-Nucleotide Binding Domain
Mutant
Length = 140
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 20 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 76
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 77 ---------PGAFFGEMALISGEPWSATVSAATTVSLLSLHSADFQ 113
>pdb|1U12|A Chain A, M. Loti Cyclic Nucleotide Binding Domain Mutant
pdb|1U12|B Chain B, M. Loti Cyclic Nucleotide Binding Domain Mutant
Length = 138
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 18 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 74
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 75 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 111
>pdb|3POT|B Chain B, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
pdb|3POT|E Chain E, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
Length = 443
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
A L NT A L++IL EQ+A F V A E +H G+ Y+G++ D L+ D
Sbjct: 202 AATLKNTLQAAALSTIL-----EQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFD 254
>pdb|1VP6|A Chain A, M.Loti Ion Channel Cylic Nucleotide Binding Domain
pdb|1VP6|C Chain C, M.Loti Ion Channel Cylic Nucleotide Binding Domain
Length = 138
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 18 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 74
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 75 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 111
>pdb|1MRO|B Chain B, Methyl-Coenzyme M Reductase
pdb|1MRO|E Chain E, Methyl-Coenzyme M Reductase
pdb|1HBM|B Chain B, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBM|E Chain E, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBN|B Chain B, Methyl-Coenzyme M Reductase
pdb|1HBN|E Chain E, Methyl-Coenzyme M Reductase
pdb|1HBO|B Chain B, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBO|E Chain E, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBU|B Chain B, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|1HBU|E Chain E, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|3M1V|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M1V|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|B Chain B, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|E Chain E, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
Length = 442
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
A L NT A L++IL EQ+A F V A E +H G+ Y+G++ D L+ D
Sbjct: 201 AATLKNTLQAAALSTIL-----EQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFD 253
>pdb|3CL1|A Chain A, M. Loti Cyclic-Nucleotide Binding Domain, Cyclic-Gmp Bound
pdb|3CL1|B Chain B, M. Loti Cyclic-Nucleotide Binding Domain, Cyclic-Gmp Bound
Length = 140
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 20 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 76
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 77 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 113
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F AA + L L +G++YR + D +MLD GH+++
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI 162
>pdb|2PQQ|A Chain A, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
pdb|2PQQ|B Chain B, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
pdb|2PQQ|C Chain C, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
pdb|2PQQ|D Chain D, Structural Genomics, The Crystal Structure Of The
N-Terminal Domain Of A Transcriptional Regulator From
Streptomyces Coelicolor A3(2)
Length = 149
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
H + L + LF L D Q L V + GD + +G GD YVV G+ ++
Sbjct: 1 GHXDDVLRRNPLFAALDDEQSAELRASXSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLH 60
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
T + L +L GEL+L P A+ A+T L AL D +
Sbjct: 61 RTSPDGR---ENXLAVVGPSEL--IGELSLFDPGPRTATGTALTEVKLLALGHGDLQ 112
>pdb|2K0G|A Chain A, Solution Structure Of A Bacterial Cyclic Nucleotide-
Activated K+ Channel Binding Domain In Complex With Camp
pdb|2KXL|A Chain A, Solution Structure Of A Bacterial Cyclic
Nucleotide-Activated K+ Channel Binding Domain In The
Unliganded State
Length = 142
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 22 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 78
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 79 ---------PGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 115
>pdb|3E97|A Chain A, Crystal Structure Of Transcriptional Regulator Of CrpFNR
Family (Yp_604437.1) From Deinococcus Geothermalis Dsm
11300 At 1.86 A Resolution
Length = 231
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+ + + L + Q ++VV+Q EG+ ++V +G V+ G
Sbjct: 13 LFQNVPEDAXREALKVVTERNFQPDELVVEQDAEGEALHLVTTG---VVRVSRVSLGGRE 69
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
RVL A + GE A++ ++ ASVRA+T L RE F IL
Sbjct: 70 RVLGDIYAPGV--VGETAVLAHQERSASVRALTPVRTLXLHREHFELIL 116
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
E A F AA + L L +G++YR + D +MLD GH+++
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI 483
>pdb|3CLP|A Chain A, M. Loti Cyclic-Nucleotide Binding Domain Mutant 2
pdb|3CLP|C Chain C, M. Loti Cyclic-Nucleotide Binding Domain Mutant 2
Length = 140
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 20 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELG--- 76
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 77 ---------PGAFFGEMALISGEPESATVSAATTVSLLSLHSADFQ 113
>pdb|3BEH|A Chain A, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|3BEH|B Chain B, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|3BEH|C Chain C, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|3BEH|D Chain D, Structure Of A Bacterial Cyclic Nucleotide Regulated Ion
Channel
pdb|2ZD9|A Chain A, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
pdb|2ZD9|B Chain B, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
pdb|2ZD9|C Chain C, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
pdb|2ZD9|D Chain D, Structure Of A Bacterial Cyclic-Nucleotide Regulated Ion
Channel
Length = 355
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVP 539
LF+KL + ++ ++ V AG ++ + G GD + V G V + G
Sbjct: 235 LFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVELGPG- 293
Query: 540 RVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ FGE+AL+ +P A+V A T L +L DF+
Sbjct: 294 -----------AFFGEMALISGEPRSATVSAATTVSLLSLHSADFQ 328
>pdb|3ETQ|A Chain A, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
pdb|3ETQ|B Chain B, X-Ray Structure Of Cysteine-Free Fragment Of Mhcn2 C-
Terminal Region From Amino Acids 443-630 Including
C508n, C584s, And C601s Mutations
Length = 204
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE++L
Sbjct: 103 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEISL 149
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 150 LTRGRRTASVRADTYSRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 200
Score = 30.4 bits (67), Expect = 5.1, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 28/130 (21%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N ++ KL+ S+ L + ++ + L F G I+
Sbjct: 58 ELNGPLREEIVNFNNRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 117
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLL- 701
+Y IQ G V + T+ +KE+ + S+GSYFGE +LL
Sbjct: 118 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEISLLT 151
Query: 702 -GEHMGSLTA 710
G S+ A
Sbjct: 152 RGRRTASVRA 161
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ SV+ AL LH +GV++R + D ++L G +++
Sbjct: 133 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKL 182
>pdb|3U0Z|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U0Z|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAE-KL---SS 552
R EV Q GD ++++G G Y + G V V+ + + E KL S
Sbjct: 99 RFEVFQPGDYIIREGAVGKKMYFIQHG--------------VAGVITKSSKEMKLTDGSY 144
Query: 553 FGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
FGE+ L+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 145 FGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 201
>pdb|3OTF|A Chain A, Structural Basis For The Camp-Dependent Gating In Human
Hcn4 Channel
Length = 220
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL 556
R EV Q GD ++++G G Y + G V++ + N E Y FGE+
Sbjct: 93 RFEVFQPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKETKLADGSY-------FGEI 142
Query: 557 ALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
L+ ASVRA T L++L ++F +L
Sbjct: 143 CLLTRGRRTASVRADTYCRLYSLSVDNFNEVL 174
>pdb|3U11|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
pdb|3U11|B Chain B, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL---SSF 553
R EV Q GD ++++G G Y + G V++ + N E KL S F
Sbjct: 99 RFEVFQPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKET----------KLADGSYF 145
Query: 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
GE+ L+ ASVRA T L++L ++F +L
Sbjct: 146 GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVL 180
>pdb|3U10|A Chain A, Tetramerization Dynamics Of The C-Terminus Underlies
Isoform-Specific Camp-Gating In Hcn Channels
Length = 210
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 104 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 150
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 151 LTRGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 201
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 59 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 118
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 119 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 152
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 153 R--GRRTASVRADTYCRLYS 170
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 123 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 175
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 123 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 175
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 122 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 174
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|1Q3E|A Chain A, Hcn2j 443-645 In The Presence Of Cgmp
pdb|1Q3E|B Chain B, Hcn2j 443-645 In The Presence Of Cgmp
Length = 207
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 101 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 147
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGIL 588
+ ASVRA T L++L ++F +L
Sbjct: 148 LTRGRRTASVRADTYCRLYSLSVDNFNEVL 177
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 56 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 115
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 116 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 149
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 150 R--GRRTASVRADTYCRLYS 167
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 129 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 181
>pdb|2Z69|A Chain A, Crystal Structure Of The Sensor Domain Of The
Transcriptional Regulator Dnr From Pseudomonas
Aeruginosa
pdb|2Z69|B Chain B, Crystal Structure Of The Sensor Domain Of The
Transcriptional Regulator Dnr From Pseudomonas
Aeruginosa
pdb|2Z69|C Chain C, Crystal Structure Of The Sensor Domain Of The
Transcriptional Regulator Dnr From Pseudomonas
Aeruginosa
Length = 154
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ 531
++ L H LF L+ Q LL V + G V +QG FY + SG ++
Sbjct: 11 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLT 70
Query: 532 EEKNGEVPRVLQRYTAEKLSSFGELALMYNKP-LQASVRAVTNGMLWALKREDF 584
E ++ V T E+ ++F E + + P A+ +AV L+ + +
Sbjct: 71 PEGQEKILEV----TNER-NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAY 119
>pdb|3FFQ|A Chain A, Hcn2i 443-640 Apo-State
pdb|3FFQ|B Chain B, Hcn2i 443-640 Apo-State
Length = 202
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 101 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 147
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 148 LTRGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 198
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 56 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 115
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 116 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 149
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 150 R--GRRTASVRADTYCRLYS 167
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 766 VSLTDMEWRKCLYSTDCSEIG----------LVLLRDSEN--FLSLKRFSKQKVKCLGKE 813
+L +M RK ++ D +IG + L R+ +N ++LK K +++ G E
Sbjct: 2 TALAEMPKRK--FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE 59
Query: 814 VQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSAR 871
Q+ +E + + + ++ D L+L L L H DEQ +
Sbjct: 60 HQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
+ AL H+R V++R + P+ L++ G L++ W
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW 161
>pdb|3BPZ|A Chain A, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|B Chain B, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|C Chain C, Hcn2-I 443-460 E502k In The Presence Of Camp
pdb|3BPZ|D Chain D, Hcn2-I 443-460 E502k In The Presence Of Camp
Length = 202
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 101 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 147
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRL 610
+ ASVRA T L++L ++F +L E+ + ++D L R+
Sbjct: 148 LTRGRRTASVRADTYCRLYSLSVDNFNEVL-EEYPMMRRAFETVAIDRLDRI 198
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L + N + KL+ S+ L + ++ + L F G I+
Sbjct: 56 ELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 115
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 116 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 149
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 150 R--GRRTASVRADTYCRLYS 167
>pdb|2Q0A|A Chain A, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
pdb|2Q0A|B Chain B, Structure And Rearrangements In The Carboxy-Terminal
Region Of Spih Channels
Length = 200
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS---FGELAL 558
Q GD ++++G G Y + G V++ + N E+ KLS FGE+ L
Sbjct: 99 QPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKEM----------KLSDGSYFGEICL 145
Query: 559 MYNKPLQASVRAVTNGMLWALKREDFRGIL 588
+ ASVRA T L++L ++F +L
Sbjct: 146 LTRGRRTASVRADTYCRLYSLSVDNFNEVL 175
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 583 DFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAA 642
+ G L E N + KL+ S+ L + ++ + L F G I+
Sbjct: 54 ELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKK 113
Query: 643 LYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLG 702
+Y IQ G V + T+ +KE+ + S+GSYFGE LL
Sbjct: 114 MYFIQHGVVSVL------------------------TKGNKEMKL--SDGSYFGEICLLT 147
Query: 703 EHMGSLTAVAVDDVVCAILT 722
G TA D C + +
Sbjct: 148 R--GRRTASVRADTYCRLYS 165
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 766 VSLTDMEWRKCLYSTDCSEIG----------LVLLRDSEN--FLSLKRFSKQKVKCLGKE 813
+L +M RK ++ D +IG + L R+ +N ++LK K +++ G E
Sbjct: 1 TALAEMPKRK--FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE 58
Query: 814 VQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSAR 871
Q+ +E + + + ++ D L+L L L H DEQ +
Sbjct: 59 HQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 872 FCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
+ AL H+R V++R + P+ L++ G L++ W
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW 160
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 862 HTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
H DEQ + + AL H+R V++R + P+ L++ G L++ W
Sbjct: 108 HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW 160
>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
pdb|3AGR|B Chain B, Crystal Structure Of Nucleoside Triphosphate Hydrolases
From Neospora Caninum
Length = 602
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 515 DCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS-FGELALMYNKPLQASVRAVTN 573
DCF +VG+G+F+ Q E+ PR E SS F + ++ AS +T
Sbjct: 408 DCFQIVGTGDFDTCQAQVEELLVSPRFPLPANIEAASSGFESVGQVFKFASTASPMVITG 467
Query: 574 GMLWA---------LKREDFRG---ILMSEFSNLSSLKLLRSVDLLSRLTILQLSHLADT 621
G ++A L +DF+G L++ S ++ + D L ++QL +
Sbjct: 468 GAMYASISTMQGLGLLPKDFQGDLEQLIAASRTYCSSPVVNNGDGL----VIQLPNAEQK 523
Query: 622 LSEVSFSAGQTI 633
L+ +++ +TI
Sbjct: 524 LTSMNYDLCKTI 535
>pdb|3DKW|A Chain A, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|B Chain B, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|C Chain C, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|D Chain D, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|E Chain E, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|F Chain F, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|G Chain G, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|H Chain H, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|I Chain I, Crystal Structure Of Dnr From Pseudomonas Aeruginosa.
pdb|3DKW|J Chain J, Crystal Structure Of Dnr From Pseudomonas Aeruginosa
Length = 227
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ 531
++ L H LF L+ Q LL V + G V +QG FY + SG ++
Sbjct: 8 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLT 67
Query: 532 EEKNGEVPRVLQRYTAEKLSSFGELALMYNKP-LQASVRAVTNGMLWALKREDF 584
E ++ V T E+ ++F E + + P A+ +AV L+ + +
Sbjct: 68 PEGQEKILEV----TNER-NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAY 116
>pdb|4HBN|A Chain A, Crystal Structure Of The Human Hcn4 Channel C-terminus
Carrying The S672r Mutation
Length = 205
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 17/95 (17%)
Query: 498 RVEV-QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL---SSF 553
R EV Q GD ++++G G Y + G V++ + N E KL S F
Sbjct: 93 RFEVFQPGDYIIREGTIGKKMYFIQHG---VVSVLTKGNKET----------KLADGSYF 139
Query: 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGIL 588
GE+ L+ A VRA T L++L ++F +L
Sbjct: 140 GEICLLTRGRRTARVRADTYCRLYSLSVDNFNEVL 174
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ +V+ AL LH +GV++R + D ++L G +++
Sbjct: 108 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 157
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
R+C++ C E + ++ + FS ++V+ L + LKE ++++ VS +
Sbjct: 34 RRCIHKPTCKEYAVKII----DVTGGGSFSAEEVQELRE--ATLKEVDILRKVSGHPNII 87
Query: 834 QILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLY 891
Q+ T + L+ + L L L E+ R +++ + LHK +++
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 892 RGVSPDVLMLDKSGHLQV 909
R + P+ ++LD ++++
Sbjct: 148 RDLKPENILLDDDMNIKL 165
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ +V+ AL LH +GV++R + D ++L G +++
Sbjct: 112 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 161
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ +V+ AL LH +GV++R + D ++L G +++
Sbjct: 117 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 166
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
R+C++ C E + ++ + FS ++V+ L + LKE ++++ VS +
Sbjct: 34 RRCIHKPTCKEYAVKII----DVTGGGSFSAEEVQELRE--ATLKEVDILRKVSGHPNII 87
Query: 834 QILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLY 891
Q+ T + L+ + L L L E+ R +++ + LHK +++
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 892 RGVSPDVLMLDKSGHLQV 909
R + P+ ++LD ++++
Sbjct: 148 RDLKPENILLDDDMNIKL 165
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ +V+ AL LH +GV++R + D ++L G +++
Sbjct: 239 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 288
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ +V+ AL LH +GV++R + D ++L G +++
Sbjct: 119 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 168
>pdb|1Q43|A Chain A, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q43|B Chain B, Hcn2i 443-640 In The Presence Of Camp, Selenomethionine
Derivative
pdb|1Q5O|A Chain A, Hcn2j 443-645 In The Presence Of Camp, Selenomethionine
Derivative
Length = 207
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
Q GD ++++G G Y + G V+ T+ K ++ S FGE+ L+
Sbjct: 101 QPGDYIIREGTIGKKXYFIQHGVVSVL-TKGNKEXKLS---------DGSYFGEICLLTR 150
Query: 562 KPLQASVRAVTNGMLWALKREDFRGIL 588
ASVRA T L++L ++F +L
Sbjct: 151 GRRTASVRADTYCRLYSLSVDNFNEVL 177
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVP 833
R+C++ C E + ++ + FS ++V+ L + LKE ++++ VS +
Sbjct: 21 RRCIHKPTCKEYAVKII----DVTGGGSFSAEEVQELRE--ATLKEVDILRKVSGHPNII 74
Query: 834 QILCTCADSMHAGLLLNTYLACPLASIL--HTPLDEQSARFCAASVVAALEDLHKRGVLY 891
Q+ T + L+ + L L L E+ R +++ + LHK +++
Sbjct: 75 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 134
Query: 892 RGVSPDVLMLDKSGHLQV 909
R + P+ ++LD ++++
Sbjct: 135 RDLKPENILLDDDMNIKL 152
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 860 ILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+ HT ++E+ +V+ AL LH +GV++R + D ++L G +++
Sbjct: 162 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 211
>pdb|3I54|A Chain A, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|B Chain B, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|C Chain C, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I54|D Chain D, Crystal Structure Of Mtbcrp In Complex With Camp
pdb|3I59|B Chain B, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 468 EAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEV 527
++H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 23 QSHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKI 82
Query: 528 MATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + ++ FGEL++ P +S +T ++ R+ R
Sbjct: 83 GRRAPDGRENLLTIMG-----PSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 135
>pdb|1O7F|A Chain A, Crystal Structure Of The Regulatory Domain Of Epac2
Length = 469
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G ++ QG EG +Y++ G V+ + G V T + FG+LAL+ +
Sbjct: 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGK---GVV------CTLHEGDDFGKLALVND 417
Query: 562 KPLQAS-VRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
P AS V N + +EDF IL +N LK
Sbjct: 418 APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 456
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L L + RF ++ AL+ H G+++R V P +M+D H ++R W
Sbjct: 124 LRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDW 176
>pdb|2BYV|E Chain E, Structure Of The Camp Responsive Exchange Factor Epac2 In
Its Auto-Inhibited State
Length = 999
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G ++ QG EG +Y++ G V+ + G V T + FG+LAL+ +
Sbjct: 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGK---GVV------CTLHEGDDFGKLALVND 417
Query: 562 KPLQAS-VRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
P AS V N + +EDF IL +N LK
Sbjct: 418 APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 456
>pdb|3R6S|A Chain A, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|B Chain B, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|C Chain C, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|D Chain D, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|E Chain E, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
pdb|3R6S|F Chain F, Crystal Structure Of Glxr Transcription Factor From
Corynebacterium Glutamicum With Camp
Length = 247
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 605 DLLSRLTILQ------LSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA- 657
++LSR I Q +++L + V F G TI + E LYII G+V++ A
Sbjct: 26 EILSRAGIFQGVDPTAVNNLIQDMETVRFPRGATIFDEGEPGDRLYIITSGKVKLARHAP 85
Query: 658 ----DLLSNANVCSLKSDLHVEDDGTQSSKELSV 687
+LL+ + +L + D G ++S + V
Sbjct: 86 DGRENLLTIMGPSDMFGELSIFDPGPRTSSAVCV 119
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 864 PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
PL E +R VVAA++ H RGV++R + + +++D
Sbjct: 135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID 173
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQVRSTFW 914
L+ L + RF ++ AL+ H G+++R V P +++D H ++R W
Sbjct: 124 LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE-HRKLRLIDW 176
>pdb|3D0S|A Chain A, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|3D0S|B Chain B, Camp Receptor Protein From M.Tuberculosis, Camp-Free Form
pdb|4A2U|A Chain A, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|B Chain B, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|C Chain C, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|D Chain D, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|E Chain E, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|F Chain F, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|G Chain G, Crp(Cap) From Myco. Tuberculosis, With Camp
pdb|4A2U|H Chain H, Crp(Cap) From Myco. Tuberculosis, With Camp
Length = 227
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVM 528
+H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 2 SHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIG 61
Query: 529 ATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + ++ FGEL++ P +S +T ++ R+ R
Sbjct: 62 RRAPDGRENLLTIMG-----PSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 113
>pdb|3MZH|A Chain A, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
pdb|3MZH|B Chain B, Crystal Structure Of Camp Receptor Protein From
Mycobacterium Tuberculosis In Complex With Camp And Its
Dna Binding Element
Length = 225
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMA 529
H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 1 HMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGR 60
Query: 530 TQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFR 585
+ + ++ FGEL++ P +S +T ++ R+ R
Sbjct: 61 RAPDGRENLLTIMG-----PSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALR 111
>pdb|3CF6|E Chain E, Structure Of Epac2 In Complex With Cyclic-Amp And Rap
Length = 694
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561
+ G ++ QG EG +Y++ G V+ + G V T + FG+LAL+ +
Sbjct: 62 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGK---GVV------CTLHEGDDFGKLALVND 112
Query: 562 KPLQAS-VRAVTNGMLWALKREDFRGILMSEFSNLSSLK 599
P AS V N + +EDF IL +N LK
Sbjct: 113 APRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 151
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 118 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 161
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 117 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 117 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSP-DVLMLDKSGH 906
E+ A F ++ +E LH +GV++R + P ++L +D+SG+
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 859 SILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
+L+ L + R+ ++ AL+ H +G+++R V P +M+D
Sbjct: 137 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 180
>pdb|3I59|A Chain A, Crystal Structure Of Mtbcrp In Complex With N6-Camp
Length = 249
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 468 EAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEV 527
++H++ L +F+ + S L +Q V+ G V +G GD Y++ SG+ ++
Sbjct: 23 QSHMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKI 82
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSP-DVLMLDKSGH 906
E+ A F ++ +E LH +GV++R + P ++L +D+SG+
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 866 DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
+EQ A C A V+ AL LH +GV++R + D ++L G +++
Sbjct: 140 EEQIATVCEA-VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL 182
>pdb|1MJ9|A Chain A, Crystal Structure Of Yeast Esa1(C304s) Mutant Complexed
With Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|3TO6|A Chain A, Crystal Structure Of Yeast Esa1 Hat Domain Complexed With
H4k16coa Bisubstrate Inhibitor
pdb|3TO7|A Chain A, Crystal Structure Of Yeast Esa1 Hat Domain Bound To
Coenzyme A With Active Site Lysine Acetylated
Length = 276
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 180 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 227
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 228 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 270
>pdb|1MJB|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
E338q Mutant Complexed With Acetyl Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|1FY7|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
Domain Complexed With Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|1MJA|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
Domain Complexed With Acetyl Coenzyme A
Length = 278
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 182 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 229
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 230 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 272
>pdb|3TO9|A Chain A, Crystal Structure Of Yeast Esa1 E338q Hat Domain Bound To
Coenzyme A With Active Site Lysine Acetylated
Length = 276
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 562 KPLQ----ASVRAVTNGMLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSH 617
KPL S RA + L L E + I + E S+++S+ + D+L H
Sbjct: 180 KPLSDLGLLSYRAYWSDTLITLLVEHQKEITIDEISSMTSMT---TTDIL---------H 227
Query: 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL 660
A TL+ + + GQ I+ +NE + Y + + R T D + L
Sbjct: 228 TAKTLNILRYYKGQHIIFLNEDILDRYNRLKAKKRRTIDPNRL 270
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
L+ L + RF ++ AL+ H +G+++R V P +M+D
Sbjct: 130 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 861 LHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902
L+ L + RF ++ AL+ H +G+++R V P +M+D
Sbjct: 125 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
LDE + V+ LE LHK G ++R V ++L + G +Q+
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
>pdb|3PUM|A Chain A, Crystal Structure Of P Domain Dimer Of Norovirus Va207
pdb|3PUM|B Chain B, Crystal Structure Of P Domain Dimer Of Norovirus Va207
pdb|3PUN|A Chain A, Crystal Structure Of P Domain Dimer Of Norovirus Va207
With Lewis Y Tetrasaccharide
pdb|3PUN|B Chain B, Crystal Structure Of P Domain Dimer Of Norovirus Va207
With Lewis Y Tetrasaccharide
pdb|3PVD|A Chain A, Crystal Structure Of P Domain Dimer Of Norovirus Va207
Complexed With 3'-Sialyl-Lewis X Tetrasaccharide
pdb|3PVD|B Chain B, Crystal Structure Of P Domain Dimer Of Norovirus Va207
Complexed With 3'-Sialyl-Lewis X Tetrasaccharide
Length = 316
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 610 LTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLL-----SNAN 664
+ +L++S + + S Q + +EG+ ++Q R T D +LL S +
Sbjct: 8 IPVLKISEMTN--SRFPVPVDQMYTSRSEGI----VVQPQNGRATIDGELLGTTLVSPVS 61
Query: 665 VCSLKSDLHVEDDGTQSSKELSVEKSEGS 693
VC+ K +L E G +L + +GS
Sbjct: 62 VCNFKGNLQAEVPGQHQLYQLQLTNLDGS 90
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 865 LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
LDE + V+ LE LHK G ++R V ++L + G +Q+
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHLQV 909
L + P+ E+ ++V AL L K GV++R V P ++LD+ G +++
Sbjct: 113 LKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 857 LASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQV 909
L ++H LD + + ++ ++ LH G+++R + P +++ L++
Sbjct: 115 LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,233,048
Number of Sequences: 62578
Number of extensions: 1089844
Number of successful extensions: 2724
Number of sequences better than 100.0: 251
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 2348
Number of HSP's gapped (non-prelim): 308
length of query: 914
length of database: 14,973,337
effective HSP length: 108
effective length of query: 806
effective length of database: 8,214,913
effective search space: 6621219878
effective search space used: 6621219878
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)