BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002511
(914 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 1665 bits (4313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 801/918 (87%), Positives = 866/918 (94%), Gaps = 15/918 (1%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRLEIKRKLAQRSERVKSVDLHP+EPWILASLYSGT+CIWNYQ+Q MAKSFEVTELPV
Sbjct: 1 MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RSAKFVARKQWVVAGADDM+IRVYNYNTMDKVKVFEAH+DYIRCVAVHPTLPYVLSSSDD
Sbjct: 61 RSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDWEKGW CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
Sbjct: 121 MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY+KSSRR+VIGYDEGTIMVK+G
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
RE PVASMDN+GKIIWAKHNEIQT NIKS+GADYEVTDGERLPL+VKELGTCDLYPQSLK
Sbjct: 301 REIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLSVKELGTCDLYPQSLK 360
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ 420
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGS LEFVWSS+GE AVRESSSKIKIFSKNFQ
Sbjct: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ 420
Query: 421 EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 480
EKRS+RPTFSAE+I+GGTLLAMCS+DFICFYDWAECRLI+RIDVTVKNLYWADSGDLVAI
Sbjct: 421 EKRSIRPTFSAEKIFGGTLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAI 480
Query: 481 ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS 540
ASDTSFYILK+NRD+V+++ DSG+P +E+GVEDAFE+LHE +ERVRTG+WVGDCFIYNNS
Sbjct: 481 ASDTSFYILKFNRDLVTSHFDSGRPTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS 540
Query: 541 SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
SW+LNYCVGGEVTTM+HLDRPMYLLGYLASQSRV+L+DKEFNV+GYTLLLSLIEYKTLVM
Sbjct: 541 SWKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM 600
Query: 601 RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE 660
RGDL++A+EILP+IPK+ HNSVA FLESRGMIE+A+E+ATDPDYRFELAIQLGRLE+AQE
Sbjct: 601 RGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQE 660
Query: 661 IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA 720
IA EVQSESKWKQLGELAMS+GKL+MAE CMK AMDLSGLLLLYSSLGDAEG++KLA+LA
Sbjct: 661 IAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLA 720
Query: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK 780
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVA+WRKDL K
Sbjct: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK 780
Query: 781 VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF 840
VN KAAESLADPEEYSNLF+DWQVAL+VE+KA TRGV+ A+DY +HADKS MTLVEAF
Sbjct: 781 VNSKAAESLADPEEYSNLFEDWQVALSVEAKAVETRGVYTGAKDYPSHADKSSMTLVEAF 840
Query: 841 RHMQIEEEDTLENGDLAHEGSEQNGEENAEEQNGEEGSQEEPV-------------VVDA 887
R++Q+EEE++LENGD+ HE E EEN EQ E+ E +VD
Sbjct: 841 RNLQVEEEESLENGDMDHE--EVVAEENGNEQRNEDDVAEHVEEHHEEKEAEEEEGIVDG 898
Query: 888 DSTDGAVLVNGNEAEEQW 905
DSTDGAVLVNG+EA+E+W
Sbjct: 899 DSTDGAVLVNGSEADEEW 916
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 1642 bits (4253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 796/925 (86%), Positives = 857/925 (92%), Gaps = 18/925 (1%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRLEIKRK AQRSERVKSVDLHP+EPWILASLYSGT+CIWNYQ+QTM KSF+VTELPV
Sbjct: 1 MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RSAKF+ARKQWVVAGADDMFIRVYNYNTMDK+KVFEAH DYIRCVAVHPTLPYVLSSSDD
Sbjct: 61 RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDWEKGW+CTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
Sbjct: 121 MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
LDAH KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV FHPE
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIG++K SRR+VIGYDEG+IMVK+G
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
RE PVASMDNSGKIIWAKHNEI TVNIKSVGAD EVTDGERLPLAVKELGTCDLYPQSLK
Sbjct: 301 REIPVASMDNSGKIIWAKHNEIHTVNIKSVGAD-EVTDGERLPLAVKELGTCDLYPQSLK 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ 420
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGE+AVRESS+KIKIFSKNFQ
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEHAVRESSTKIKIFSKNFQ 419
Query: 421 EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 480
EK++VRPTFSAE I+GGTLL MCS+DFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
Sbjct: 420 EKKTVRPTFSAEHIFGGTLLTMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 479
Query: 481 ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS 540
ASDTSFYILK+NRD+VS+Y D GK +DE+G+EDAFELL+ETNERVRTGLWVGDCFIY NS
Sbjct: 480 ASDTSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNS 539
Query: 541 SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
SWRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNV+GYTLLLSLIEYKTLVM
Sbjct: 540 SWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVM 599
Query: 601 RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE 660
RGDLE+ANE+LPSIPKEHHNSVA FLESRGM E+A+EVATDPDYRFELAIQLGRL VA++
Sbjct: 600 RGDLEQANEVLPSIPKEHHNSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKD 659
Query: 661 IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA 720
IA E Q+ESKWKQLGELAMS+GKL+MAE CM+ AMDLSGLLLLYSSLGDA+G+ KLA+LA
Sbjct: 660 IAVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALA 719
Query: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK 780
KEQGKNNVAFLCLFMLG++EDCL LLVESNRIPEAALMARSYLPSKVSEIVA+WR DL K
Sbjct: 720 KEQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTK 779
Query: 781 VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF 840
++PKAAESLADPEEY NLF++WQVAL++E++AA TRGVHPPA DY +HAD+ + TLV+AF
Sbjct: 780 ISPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVHPPAGDYCSHADRDHTTLVDAF 839
Query: 841 RHMQIEEEDTLENGDL-------------AHEGSEQNGEENAEEQNGEEGSQEEPVVVDA 887
R MQIEEE LE GD+ E Q + +QN E EE VVVDA
Sbjct: 840 RIMQIEEEGRLEQGDVLDEVGEEGEDGEEEEEEDRQEESSDGRQQNVE----EEAVVVDA 895
Query: 888 DSTDGAVLVNGNEAEEQWVLTPRHQ 912
DSTDGAVLVNGNE+EEQWVLTP +
Sbjct: 896 DSTDGAVLVNGNESEEQWVLTPPQE 920
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 1619 bits (4193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 786/912 (86%), Positives = 860/912 (94%), Gaps = 8/912 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRK AQRSERVKSVDLHP+EPWILASLYSGTVCIWNYQ+QT+ KSFEVTELPV
Sbjct: 1 MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RSAKF+ RKQWVVAGADDM+IRVYNYNTMDKVKVFEAH+DYIRCVAVHPTLPYVLSSSDD
Sbjct: 61 RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDWE GW CTQIFEGHSHYVMQV FNPKDTNTFASASLDRTIKIWNLGSPDPNFT
Sbjct: 121 MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL+GHTHNVSAVCFHPE
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY+KSSRR+VIGYDEGTIMVK+G
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
RE PVASMD+SGKIIWAKHNEIQT NIKS+GA YE TDGERLPL+VKELGTCDLYPQSLK
Sbjct: 301 REIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEATDGERLPLSVKELGTCDLYPQSLK 360
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ 420
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGS LEFVWSS+GE AVRESSSKIKIFSKNFQ
Sbjct: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ 420
Query: 421 EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 480
E++S+RPTFSAE+I+GGTLLAMCSNDFICFYDWAECRLI++IDVTVKNLYWA+SGDLVAI
Sbjct: 421 ERKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQQIDVTVKNLYWAESGDLVAI 480
Query: 481 ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS 540
ASDTSFYILKYNR++VS++ DSG+P DE+GVEDAFE+LHE +ERVRTG+WVGDCFIYNNS
Sbjct: 481 ASDTSFYILKYNRELVSSHFDSGRPTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS 540
Query: 541 SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
SW+LNYCVGGEVTTM+HLDRPMYLLGY+A+QSRVYL+DKEFNV+GYTLLLSLIEYKTLVM
Sbjct: 541 SWKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM 600
Query: 601 RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE 660
RGDL+RAN+ILP+IPKE HN+VA FLESRGMIE+A+E+ATDPDY+F+LAIQLGRLE+A+E
Sbjct: 601 RGDLDRANQILPTIPKEQHNNVAHFLESRGMIEDALEIATDPDYKFDLAIQLGRLEIAKE 660
Query: 661 IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA 720
IA EVQSESKWKQLGELAMS+GKL++AE CMK AMDLSGLLLLYSSLGDAEG+SKLA LA
Sbjct: 661 IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLA 720
Query: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK 780
KEQGKNNVAFLCLF LG+LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVA+WR+DL K
Sbjct: 721 KEQGKNNVAFLCLFTLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK 780
Query: 781 VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF 840
VNPKAAESLADPEEYSNLF+DWQVAL+VE+ A TRGV+ AE+Y +HADK +TLVEAF
Sbjct: 781 VNPKAAESLADPEEYSNLFEDWQVALSVEANTAETRGVYTAAENYPSHADKPSITLVEAF 840
Query: 841 RHMQIEEEDTLENGDLAHEGSEQNGE---ENAEEQNGEEGSQEEPVVVDADSTDGAVLVN 897
R++Q+E E++LENG++ HE +E+NG E EE+ EE EE VVDADSTDGAVLVN
Sbjct: 841 RNLQVEAEESLENGNIDHEVAEENGHVENEGDEEEQQEEEVNEEEGVVDADSTDGAVLVN 900
Query: 898 GNEAEEQWVLTP 909
G+E VLTP
Sbjct: 901 GSE-----VLTP 907
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 1614 bits (4180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/910 (84%), Positives = 845/910 (92%), Gaps = 8/910 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRLEIKRK AQRSERVKSVDLHP+EPWIL+SLYSG+VCIW+YQSQTM KSFEV+ELPV
Sbjct: 1 MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RSAKF++RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
Sbjct: 61 RSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRT KIW+LGSPDPNFT
Sbjct: 121 MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLGSPDPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
LD HQKGVNCVDYFTGGD+PYLITGSDD TAKVWDYQTKSCVQTLEGHTHN+SAVCFHPE
Sbjct: 181 LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH+TTYRLENTLNYGLERVWA+GYMK SRR+VIGYDEGTIM+K+G
Sbjct: 241 LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
RE PVASMD SGKIIWAKHNEIQTVNIK+VGA +EVTDGERLPLAVKELG+CDLYPQSLK
Sbjct: 301 REVPVASMDTSGKIIWAKHNEIQTVNIKTVGAGFEVTDGERLPLAVKELGSCDLYPQSLK 360
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ 420
HNPNGRFVVVCGDGE+IIYTALAWRNRSFGSALEFVWSS+GEYA+RES+S+IKIFSK+FQ
Sbjct: 361 HNPNGRFVVVCGDGEFIIYTALAWRNRSFGSALEFVWSSEGEYAIRESTSRIKIFSKSFQ 420
Query: 421 EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 480
EK+++RPTFSAERI+GG LLAMCS+DFICFYDWA+CRLIRRIDV VKNLYWADSGDLVAI
Sbjct: 421 EKKTIRPTFSAERIFGGILLAMCSSDFICFYDWADCRLIRRIDVNVKNLYWADSGDLVAI 480
Query: 481 ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS 540
ASDTSFYILKYNRDVV++YL+SGKPVDE+GVEDAFELLHE NERVRTG+WVGDCFIYNNS
Sbjct: 481 ASDTSFYILKYNRDVVASYLESGKPVDEEGVEDAFELLHEVNERVRTGIWVGDCFIYNNS 540
Query: 541 SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
SWRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
Sbjct: 541 SWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
Query: 601 RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE 660
RGD+ERAN+ILPSIPK +N+VA FLESRGM+EEA+E+ATD DYRF+LA+QLG+LEVA+
Sbjct: 601 RGDIERANDILPSIPKAQYNNVAHFLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKA 660
Query: 661 IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA 720
IA E QSESKWKQLGELAMSTGKL+MAE C+ QA DLSGLLLLYSSLGDAEGI KLAS A
Sbjct: 661 IAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQA 720
Query: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK 780
KE GKNNVAFLCLFMLGKLEDC+QLL++SNRIPEAALMARSYLPSKVSEIVAIWR DL K
Sbjct: 721 KEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSK 780
Query: 781 VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF 840
VNPKAAESLADP EY NLF+DWQVAL VE A+ R +PPA++Y+NHA+KS MTLVEAF
Sbjct: 781 VNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHYPPADEYLNHAEKSDMTLVEAF 840
Query: 841 RHMQIEEEDTLENGDLAHEGSEQNGEENAE--EQNGEEGSQEEPVVVDADSTDGAVLVNG 898
+ MQ+ E++ E+ ++NGE + E E+N E S +E V VDAD + VLVNG
Sbjct: 841 KRMQVIEDEETED------ALDENGEPDEEVLEENKVEESTDEAVEVDADEPEETVLVNG 894
Query: 899 NEAEEQWVLT 908
E EEQWVLT
Sbjct: 895 KEGEEQWVLT 904
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 1560 bits (4040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 750/910 (82%), Positives = 834/910 (91%), Gaps = 14/910 (1%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKLAQRSERVKSVDLHP+EPWIL+SLYSG+VCIWNYQ+QTM KSFEVTELPV
Sbjct: 1 MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RS+KF+ARKQW+VAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT P+VLSSSDD
Sbjct: 61 RSSKFIARKQWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRT+K+W+LGSPDPNFT
Sbjct: 121 MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLGSPDPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
LD H KGVNCVDYFTGGD+PYLITGSDD TAKVWDYQTKSCVQTLEGH HNVSAVCFHPE
Sbjct: 181 LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPI +TGSEDGTVR+WH+TTYRLENTLNYGLERVWA+GYMK SRR+VIGYDEGTIM+KIG
Sbjct: 241 LPITLTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
RE PVASMD+SGKIIW+KHNEIQTVNIK++GAD E+ DGERLPLAVKELGTCDLYPQSL+
Sbjct: 301 REVPVASMDSSGKIIWSKHNEIQTVNIKTIGADNEIADGERLPLAVKELGTCDLYPQSLR 360
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ 420
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWS DGEYAVRES+S+IKI+SKNFQ
Sbjct: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSVDGEYAVRESTSRIKIYSKNFQ 420
Query: 421 EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 480
E++S+RP FSAERI+GG LLAMC+NDFICF+DWAE R+IRRIDV VKNLYWADSGDLV I
Sbjct: 421 ERKSIRPPFSAERIFGGVLLAMCTNDFICFHDWAEGRMIRRIDVNVKNLYWADSGDLVTI 480
Query: 481 ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS 540
ASDTSFYILKYNRDVVS++LD G V E+GVEDAFELLHE NER+RTGLWVGDCFIYNNS
Sbjct: 481 ASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNS 540
Query: 541 SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
S RLNYCVGGEVTT+FHLDR MYLLGYLA+QSRVYLIDK+FNV+GYTLLL++IEYKTLVM
Sbjct: 541 SSRLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVM 600
Query: 601 RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE 660
RGD +RAN +LPSIPKE H+SVARFLES+GM+EEA+E+ATD +YRF+LA+QLGRLEVA+
Sbjct: 601 RGDFDRANALLPSIPKEQHDSVARFLESQGMLEEALEIATDSNYRFDLAVQLGRLEVAKA 660
Query: 661 IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA 720
IA E QSESKW+QLGELAMSTGKL+MAE C+ AMDLSGLLLLYSSLGDAEG++KL S+A
Sbjct: 661 IAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMA 720
Query: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK 780
KEQGKNNVAFLC FMLGKLE+CLQLL+ESNRIPEAALM+RSYLPSKV EIV +W+KDLQK
Sbjct: 721 KEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMSRSYLPSKVPEIVTLWKKDLQK 780
Query: 781 VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF 840
VNPKAAESLADP+EY NLF+DWQ+AL VE+ A RG++PPAE+Y+ HA++ TLVEAF
Sbjct: 781 VNPKAAESLADPDEYPNLFEDWQIALNVEANVAPKRGIYPPAEEYIIHAERPNETLVEAF 840
Query: 841 RHMQIEEEDTL--ENGDLAHEGSEQNGEENAEEQNGEEGSQEEPVVVDAD---STDGAVL 895
+ M I E+ L ENGD HE A E+NG E SQE+ V VD + STDGAVL
Sbjct: 841 KSMHIHLEEVLPDENGDDTHE---------AIEENGVEESQEDAVEVDVEADGSTDGAVL 891
Query: 896 VNGNEAEEQW 905
VNGN+ EEQW
Sbjct: 892 VNGNDTEEQW 901
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 1557 bits (4031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/910 (82%), Positives = 832/910 (91%), Gaps = 14/910 (1%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKLAQRSER KSVDLHP+EPWIL+SLYSG+VCIWNYQ+QTM KSFEVTELPV
Sbjct: 1 MPLRLDIKRKLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RS+KF+ RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPT P+VLSSSDD
Sbjct: 61 RSSKFITRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRT+K+W+LGSPDPNFT
Sbjct: 121 MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKVWSLGSPDPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
LD H KGVNCVDYFTGGD+PYLITGSDD TAKVWDYQTKSCVQTLEGH HNVSAVCFHPE
Sbjct: 181 LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPII+TGSEDGTVR+WH+TTYRLENTLNYGLERVWA+GYMK SRR+VIGYDEGTIM+KIG
Sbjct: 241 LPIILTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
RE PVASMD+SGKIIW+KHNEIQTVNIK++GAD E+ DGERLPL VKELGTCDLYPQSL+
Sbjct: 301 REVPVASMDSSGKIIWSKHNEIQTVNIKTIGADNEIADGERLPLVVKELGTCDLYPQSLR 360
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ 420
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWS DGEYAVRES+S+IKI+SKNFQ
Sbjct: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSLDGEYAVRESTSRIKIYSKNFQ 420
Query: 421 EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI 480
E++S+RP FSAERI+GG LLAMC+NDFICF+DWAE R+IRRIDV VKNLYWADSGDLV I
Sbjct: 421 ERKSIRPPFSAERIFGGVLLAMCTNDFICFHDWAEGRMIRRIDVNVKNLYWADSGDLVTI 480
Query: 481 ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS 540
ASDTSFYILKYNRDVVS++LD G V E+GVEDAFELLHE NER+RTGLWVGDCFIYNNS
Sbjct: 481 ASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERIRTGLWVGDCFIYNNS 540
Query: 541 SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM 600
S RLNYCVGGEVTT+FHLDR MYLLGYLA+QSRVYLIDK+FNV+GYTLLL++IEYKTLVM
Sbjct: 541 SSRLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVM 600
Query: 601 RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE 660
RGD +RAN +LPSIPKE H+SVARFLESRGM+EEA+E+ATD +YRF+LA+QLGRLEVA+
Sbjct: 601 RGDFDRANALLPSIPKEQHDSVARFLESRGMLEEALEIATDSNYRFDLAVQLGRLEVAKA 660
Query: 661 IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA 720
IA E QSESKW+QLGELAMSTGKL+MAE C+ AMDLSGLLLLYSSLGDAEG++KL S+A
Sbjct: 661 IAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMA 720
Query: 721 KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK 780
KEQGKNNVAFLC FMLGKLE+CLQLL+ESNRIPEAALM+RSYLPSKV EIV +W+KDLQK
Sbjct: 721 KEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMSRSYLPSKVPEIVTLWKKDLQK 780
Query: 781 VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF 840
VNPKAAESLADP EY NLF+DWQ+AL VE+ A RG++ PA++Y+ HA++ TLVEAF
Sbjct: 781 VNPKAAESLADPNEYPNLFEDWQIALNVEANVAPKRGIYAPAKEYIIHAERPNETLVEAF 840
Query: 841 RHMQIEEEDTL--ENGDLAHEGSEQNGEENAEEQNGEEGSQEEPVVVDAD---STDGAVL 895
++M+I +E+ L ENGD HE A E+NG E SQE+ V VD + STDG VL
Sbjct: 841 KNMRIHQEEVLPDENGDDTHE---------AIEENGVEESQEDAVEVDVEADGSTDGTVL 891
Query: 896 VNGNEAEEQW 905
VNGN+ EEQW
Sbjct: 892 VNGNDTEEQW 901
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/826 (61%), Positives = 662/826 (80%), Gaps = 3/826 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DTEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVRESSSKIKIFSKNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RES+S +KIF KNF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIF-KNF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D GLLLL ++ G+A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/826 (61%), Positives = 662/826 (80%), Gaps = 3/826 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVRESSSKIKIFSKNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RES+S +KIF KNF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIF-KNF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIISYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D GLLLL ++ G+A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/826 (61%), Positives = 662/826 (80%), Gaps = 3/826 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVRESSSKIKIFSKNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RES+S +KIF KNF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIF-KNF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAVQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D GLLLL ++ G+A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHAELWPAKQY 824
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/826 (61%), Positives = 661/826 (80%), Gaps = 3/826 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVRESSSKIKIFSKNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RES+S +KIF KNF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIF-KNF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+ED FE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D GLLLL ++ G+A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/826 (61%), Positives = 660/826 (79%), Gaps = 3/826 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL S+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQT EGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +GYDEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G D E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-DTEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVRESSSKIKIFSKNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RES+S +KIF KNF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIF-KNF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+DSG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D GLLLL ++ G+A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ Y
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQY 824
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/826 (61%), Positives = 660/826 (79%), Gaps = 3/826 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL+IKRKL RS+RVKSVDLHP+EPW+LASLY+G+VC+WN+++QT+ K+FEV +LPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFVARK WVV GADDM IRV+NYNT+++V +FEAH+DYIRC+AVHPT P++L+SSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLWDW+K W C+Q+FEGH+HYVMQ+ NPKD N FASASLDRTIK+W LGS PNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNC+DY++GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH NVS FHPE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPIIITGSEDGTVRIWH++TYRLE+TLNYG+ERVW + ++ S + +G DEG+I+VK+G
Sbjct: 241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGCDEGSIIVKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK 360
REEP SMD +GKIIWAKH+E+Q N+K++G + E+ DGERLPLAVK++G+C++YPQ+++
Sbjct: 301 REEPAMSMDANGKIIWAKHSEVQQANLKAMG-NAEIKDGERLPLAVKDMGSCEIYPQTIQ 359
Query: 361 HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDG-EYAVRESSSKIKIFSKNF 419
HNPNGRFVVVCGDGEYIIYTA+A RN+SFGSA EF W+ D EYA+RES+S +KIF KNF
Sbjct: 360 HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIF-KNF 418
Query: 420 QEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVA 479
+EK+S +P F AE IYGG LL + S + + FYDW LIRRI++ K+++W+ SG+LV
Sbjct: 419 KEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSGSGELVC 478
Query: 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNN 539
IA++ SF+ILKY + V A ++ + V E G+EDAFE+L E E V+TGLWVGDCFIY +
Sbjct: 479 IATEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTS 538
Query: 540 SSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLV 599
S RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T V
Sbjct: 539 SVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAV 598
Query: 600 MRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQ 659
MR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A
Sbjct: 599 MRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAY 658
Query: 660 EIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASL 719
++A E +SE KWKQL ELA+S + +A+ C+ A D GLLLL ++ G+A ++KLA
Sbjct: 659 QLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEG 718
Query: 720 AKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQ 779
A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L
Sbjct: 719 AERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLS 778
Query: 780 KVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY 825
KVN KAAESLADP EY NLF + A VE T PA+ +
Sbjct: 779 KVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQH 824
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/833 (57%), Positives = 657/833 (78%), Gaps = 6/833 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVT-ELP 59
MPLRL+IK+KL+ RS+RVKSVD+HP+EPWILASLY G V IWNY++Q M KSFEV+ P
Sbjct: 1 MPLRLDIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNP 60
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSD 119
VR+A+F+A+KQW+V G+DD +IRVYNYNTM+K+K FEAH DYIRC+ VHPTLPY+LSSSD
Sbjct: 61 VRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSD 120
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
DM IKLWD+EKGW TQ+FEGHSHYVM + +NPKDTN FA+ASLD+T+K+W++ SP P+F
Sbjct: 121 DMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHF 180
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
TL+ H+KG+N V+YF+GG+KPYLI+G+DD K+WDYQ+K+CVQTLEGH++NVS VC+HP
Sbjct: 181 TLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHP 240
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKI 299
ELP+I++GSEDGTV++WH++TYRLE TLNYG+ VW++ +++ S I +GYD+GT+++KI
Sbjct: 241 ELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKI 300
Query: 300 GREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSL 359
G+ +P SMD GK+I+AKHNEI+ NI S + EV DGE+L L K+LG C+++PQSL
Sbjct: 301 GKNKPPVSMDQGGKVIYAKHNEIRISNISST-LEQEVQDGEKLSLQSKDLGNCEVFPQSL 359
Query: 360 KHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSD-GEYAVRESSSKIKIFSKN 418
+HN NGRFV VCGDGE+IIYTALAWRN+SFG+ALEFVW+ D G+YAVRES+S+IKIF KN
Sbjct: 360 QHNSNGRFVSVCGDGEFIIYTALAWRNKSFGNALEFVWAEDSGQYAVRESTSRIKIF-KN 418
Query: 419 FQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTV-KNLYWADSGDL 477
F+E S +P+FSAE I+GG+LL + SND +CFY W +IRRI+ T KN++W+++GD
Sbjct: 419 FKETHSFKPSFSAEGIFGGSLLGVKSNDTLCFYSWDSADIIRRIEKTSPKNIFWSENGDY 478
Query: 478 VAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIY 537
+AI +D S +IL+Y +D V Y++SG+P+ E G+E+AF+++HE + + TGLWVGDCFIY
Sbjct: 479 LAIVTDKSTFILRYYKDTVQKYIESGQPIGELGIENAFDVVHEIEDTIGTGLWVGDCFIY 538
Query: 538 NNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKT 597
N S +LNYCVG EV T+ HL++ MYLL YL R+YL DK N++ Y L +S+I Y+T
Sbjct: 539 INRSSKLNYCVGTEVVTISHLEKHMYLLKYLPQSGRLYLSDKNLNIVSYKLHISVISYQT 598
Query: 598 LVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEV 657
++RGDLE A ILP IP++ NS+A FLES+G E+A+EV+TD D+RFELAIQL L+V
Sbjct: 599 SILRGDLEGAERILPKIPQDQRNSIAHFLESQGYKEKALEVSTDLDHRFELAIQLENLDV 658
Query: 658 AQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLA 717
A EIA + SE+K+K LG+LA+S G++++AE C+K+A DL GLLLLY+S GD EG+ LA
Sbjct: 659 AHEIALKSDSETKFKHLGDLALSIGEIKLAENCLKKAEDLPGLLLLYTSTGDIEGMKMLA 718
Query: 718 SLAKEQGKNNVAFLC-LFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRK 776
L++E+G+ N++F+C L + L +CL L S EAA MAR+YLPS V ++V W++
Sbjct: 719 KLSEEKGQTNISFICNLLLPNSLLNCLNTLCASGDYSEAAFMARTYLPSMVPDMVEKWKE 778
Query: 777 DLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHA 829
L+ + KA+++L++P ++ NLF + +++ E + R + DY+ +A
Sbjct: 779 SLKSTSSKASDALSNPIDFPNLFPQYDLSIKAEKYFESLRSQPKSSFDYLKNA 831
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/824 (56%), Positives = 632/824 (76%), Gaps = 3/824 (0%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPL+L+IKR+L RS+RVK VDLHP+EPW+L +LY+G V I NY++Q M K FEV ++PV
Sbjct: 1 MPLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
RSA+FVARK W++ G+DDM IRV+NYNT++KV FEAH+DY+RC+AVHPT P VL+SSDD
Sbjct: 61 RSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
MLIKLW+WEK W C ++FEGH+HYVMQ+ FNPKD NTFASASLDRT+K+W LGS NFT
Sbjct: 121 MLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNCVDY+ GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH N+SAVCFHPE
Sbjct: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LPI++TGSEDGTVRIWH+ TYRLE LNYG ERVW I M+ + + +GYDEG+I++K+G
Sbjct: 241 LPIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVG 300
Query: 301 REEPVASMDNSG-KIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSL 359
REEP SMD G KIIWAKH+E+Q VN+K++ E+ DGERLP+A K++G C++YPQ++
Sbjct: 301 REEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGTEIKDGERLPVATKDMGACEIYPQTI 360
Query: 360 KHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWS-SDGEYAVRESSSKIKIFSKN 418
HNPNGRFVVVCGDGEYIIYT++A RN++FGSA EFVW+ EYA+RE++ +++F +N
Sbjct: 361 AHNPNGRFVVVCGDGEYIIYTSMALRNKAFGSAQEFVWALESNEYAIRENNGTVRLF-RN 419
Query: 419 FQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLV 478
F+E++S P + AE IYGG + ++ + FYDW +L+RRI+V KN++W +SG LV
Sbjct: 420 FKERKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEVQPKNVFWNESGSLV 479
Query: 479 AIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYN 538
+A+D S+++L + V+ +++ + +++ GVE AF +L E +E V+TGLWVGDCFIY
Sbjct: 480 CLATDDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYT 539
Query: 539 NSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTL 598
NS R+NY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE NV+ + L LS++EY+T
Sbjct: 540 NSVNRINYYVGGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTA 599
Query: 599 VMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVA 658
VMR D ERA+ +LP+IPKEH VA FLE +G +A++V+TD D++F+LA+Q+G LE+A
Sbjct: 600 VMRRDFERADVVLPTIPKEHRTRVAHFLEKQGFKSQALQVSTDADHKFDLALQIGDLEIA 659
Query: 659 QEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLAS 718
++A E ++ KW QL ++A S + + + CM++A DLSGLLLL ++ GDA+ + + +
Sbjct: 660 LKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGA 719
Query: 719 LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDL 778
QG +N+AFL F+ +E CL++L+E+NR+PEAA AR+YLPS++S IV +WR+ L
Sbjct: 720 AGSAQGHHNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTYLPSQMSRIVELWREKL 779
Query: 779 QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPA 822
KVN KA +SLADP +Y+NLF AL VE R PA
Sbjct: 780 GKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPA 823
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/879 (52%), Positives = 634/879 (72%), Gaps = 21/879 (2%)
Query: 1 MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV 60
MPLRL++KRKL RS+RVK VDLHP E W+LA+LY+G V IWNY++QT+ KSFEV ++PV
Sbjct: 1 MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPV 60
Query: 61 RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD 120
R+AKFV RK WVV G+DDM IRV+NYNT+++V FEAH+DY+R + VHPTLPYV+SSSDD
Sbjct: 61 RAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDD 120
Query: 121 MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
ML+K+WDW+ W Q FEGH+HYVMQ+ NPKD NTFA+ASLD+T+K+W GS PNFT
Sbjct: 121 MLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFT 180
Query: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
L+ H+KGVNCVDY+ GG+KPY+I+G+DDH K+WDYQ K+CVQTL+GH NVS+VCFHPE
Sbjct: 181 LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPE 240
Query: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG 300
LP+IITGSED TVR+WHA TYRLE TLNYGLERVW I K + I IGYDEG++ +K+G
Sbjct: 241 LPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKLG 300
Query: 301 REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYE--VTDGERLPLAVKELGTCDLYPQS 358
REEP SMD+SGKI+WAKH+EIQ N+K++ + + DGERLPL+VK+LG+ ++YPQ+
Sbjct: 301 REEPAVSMDSSGKILWAKHSEIQQANLKTISTEESEAIQDGERLPLSVKDLGSSEIYPQT 360
Query: 359 LKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGE-YAVRESSSKIKIFSK 417
L H+ NGRFVV CGDGEYI+YTA+A RN+ FG LEFVW+ D +AVRES++ +KI K
Sbjct: 361 LAHSSNGRFVVACGDGEYIVYTAMALRNKDFGQGLEFVWAVDPNMFAVRESATNVKI-KK 419
Query: 418 NFQEKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDL 477
NF++ +S+R E I GG LLA+ SN+ +CF+DW L+RRI++T K++YW+D+G++
Sbjct: 420 NFKDHKSIRSDMVLEGISGGPLLALRSNNSLCFFDWESAVLVRRIEITSKSIYWSDNGEM 479
Query: 478 VAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIY 537
VAI D SFY+LKY+ + V+ + V E G+EDAFE++ E E V+TG W+GDCFI+
Sbjct: 480 VAICGDDSFYVLKYSAEAVA----NATEVTEDGIEDAFEVIGEQAEAVKTGFWIGDCFIF 535
Query: 538 NNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKT 597
+ R+NY VGGE+ T+ H+DRP+YLLGY+A +SRVY +DK+ NV+ Y LLLS++EY+T
Sbjct: 536 TTALNRINYYVGGEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLNVISYKLLLSVLEYQT 595
Query: 598 LVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEV 657
VMR D + A+++L +IPKE VA FLE +G ++A+ V+ DPD++F+L++ LG L+
Sbjct: 596 AVMRRDFDTADKVLTTIPKEQRTRVAHFLEKQGFKKQALAVSQDPDHKFDLSVALGDLKT 655
Query: 658 AQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLA 717
A ++A + SE KWK L A +L +A C+ +A D GL+LL + G A + KLA
Sbjct: 656 AYDLALQSDSEEKWKALSNAATLKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLA 715
Query: 718 SLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKD 777
+ +N++FL +LG ++ CL L+ + R+PEAA +AR++ PS+VS I+ +W+
Sbjct: 716 DDSAAAESHNISFLSSLLLGDIDACLDKLISTGRLPEAAFLARTHAPSRVSSILELWKAK 775
Query: 778 L----QKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSY 833
+K + K ESLADP +Y NLF + +L ES + PA V A
Sbjct: 776 ASGHSEKSSRKIGESLADPVKYENLFPGFTQSLKAESFVREISKIPVPASVRVPSA---- 831
Query: 834 MTLVEAFRHMQIEEEDTLENGDLAHEGSEQNGEENAEEQ 872
A R++Q E ++ + +G ++ Q +NA Q
Sbjct: 832 -----ATRNIQEELDEAVASGAVSFTDDGQAVLKNAPRQ 865
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/792 (46%), Positives = 533/792 (67%), Gaps = 1/792 (0%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS 62
+RL+ +RKL +ERVK+VD HP+EPW++AS Y+G V IWNY +QT+ +SF++ ++P+R+
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRA 61
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
F+ARK W V G+DD +RVYNYNT +KV FEAH DYIR + VHPT P++L+SSDDM
Sbjct: 62 CAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMT 121
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
IK ++W+ W C Q FEGHS YVM + NPKDTNTFAS+ LD T+K+W+ GS NFTL
Sbjct: 122 IKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ 181
Query: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP 242
AH +GVN V+Y+ GDKPYLIT DD+ KVWDYQTK+CV+ LEGHT+NVS FH + P
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFP 241
Query: 243 IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGRE 302
III+GSEDGTV+IWH +Y L + N+ L+R W I K + + +G+D G I +GR+
Sbjct: 242 IIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLITFSLGRD 301
Query: 303 EPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHN 362
EP +MD+SGK++W+ +NE+ + I+ ++TDG + L+VKELGT +LYP LKH+
Sbjct: 302 EPSVTMDSSGKVVWSNYNEVMSAMIRPAKEQSDLTDGSLISLSVKELGTTELYPAVLKHS 361
Query: 363 PNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEK 422
PNGRFV VCG+GEYI+YTALAWRN+++G AL+F WS+D +S + + KNF+E
Sbjct: 362 PNGRFVSVCGNGEYIVYTALAWRNKAYGKALDFAWSADSNVYGSRTSDRSIVIHKNFKES 421
Query: 423 RSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIAS 482
+ ++S ++I+GG LL + +DFICFYDW L+R+IDV K +YW D G V +A
Sbjct: 422 NRLDLSYSCDKIFGGFLLGVVGSDFICFYDWDTGILVRKIDVKPKGVYWNDDGRFVILAC 481
Query: 483 DTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSW 542
D FY+L +N ++ + ++SG +E+GV D+FE L + +E V G WV + FIY ++
Sbjct: 482 DDDFYLLGFNAEMFYSAVESGTADEEEGVADSFEALADVSESVVNGKWVAETFIYTTTAA 541
Query: 543 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRG 602
RLNY +G + + +++ YLLGY+ R+YL D++ NV+ Y+ L++IEY++LV++G
Sbjct: 542 RLNYLIGDQTYKIANVESSFYLLGYIPRDDRIYLTDRDMNVVSYSFNLAIIEYQSLVLKG 601
Query: 603 DLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIA 662
DLE A +L I + ++ FL G E A+E++ D RFELA+ RL++A +IA
Sbjct: 602 DLEAAQGLLEQISETDRPRLSDFLSRLGYKEAALELSGDSVQRFELALDAQRLDIASQIA 661
Query: 663 TEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKE 722
E+ KW+ LG+ A++ +A+ C ++ D L+LLY++ + EG+ +L+ L K
Sbjct: 662 QELDDPLKWRSLGDAALNAWDFVLAQECFEKGKDYGSLVLLYTATNNHEGLKELSQLTKS 721
Query: 723 QGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVN 782
NN AF+C ++ + +C+ +L + R PEA L A +Y P +V ++ W+ DL K
Sbjct: 722 TKINNTAFICSWLTNQPAECVNILTSTQRYPEANLFAATYCPDEVKNVLPEWKVDLTKNQ 781
Query: 783 P-KAAESLADPE 793
+ A+SL D E
Sbjct: 782 KERIADSLGDLE 793
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/794 (46%), Positives = 535/794 (67%), Gaps = 19/794 (2%)
Query: 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRS 62
++L+IK+ + RS+RVK +D HP+EPW+L +LYSG V +WNY++Q +S +VTE PVR+
Sbjct: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60
Query: 63 AKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDML 122
KF+ARK W++ G+DD IRV+NYNT +KV FEAH DYIR +AVHPT PYVLS SDD+
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120
Query: 123 IKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
+KLW+WE W Q FEGH H+VM V FNPKD +TFAS LDRT+K+W+LG PNFTL
Sbjct: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 183 AHQ-KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
Q +GVN VDY+ DKPY+IT SDD T K+WDYQTKSCV TLEGH NVS FHP L
Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRR--IVIGYDEGTIMVKI 299
PIII+GSEDGT++IW+++TY++E TLN GLER W I + R+ I G+D G ++ +
Sbjct: 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300
Query: 300 GREEPVASMDNSGKIIWA--KHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQ 357
G +EP S+D GK++W+ K+ + + + EV E L L KELG+ D++PQ
Sbjct: 301 GNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360
Query: 358 SLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSD-GEYAVRESSSKIKIFS 416
SL H+PNGRFV V GDGEY+IYTALAWRN++FG +FVW D YA+ + + +IK +
Sbjct: 361 SLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYY- 419
Query: 417 KNFQEKRSVR-PTFSA-ERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADS 474
KNF+E S P SA +R++ G LL + S+ F+ F+DW L+RRIDV K++ W+D+
Sbjct: 420 KNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDN 479
Query: 475 GDLVAIAS------DTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTG 528
G+LV I + + S Y L +N+D ++G D +GV++AF++L+E +E + +G
Sbjct: 480 GELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSG 539
Query: 529 LWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTL 588
WVGD FI+ ++ RLNY VGG+ + H + MYLLGYLA ++VYL D+E +V GY +
Sbjct: 540 KWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEI 599
Query: 589 LLSLIEYKTLVMRGDLERANE-ILPSIP-KEHHNSVARFLESRGMIEEAIEVATDPDYRF 646
L ++E++TL +RG++E A E +LP++ K+ +ARFLE + EEA+ ++ D D +F
Sbjct: 600 SLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKF 659
Query: 647 ELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSS 706
ELA+++G+L +A+++ T+ +E KW+ LG+ ++ ++A A DL L LL+SS
Sbjct: 660 ELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSS 719
Query: 707 LGDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY--LP 764
+ EG+ LA A+ GK N+AF ++ G ++ LL++S R EAA + +Y
Sbjct: 720 FNNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGD 779
Query: 765 SKVSEIVAIWRKDL 778
V++IV W+++L
Sbjct: 780 DAVNDIVTKWKENL 793
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 292 bits (747), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 222/816 (27%), Positives = 389/816 (47%), Gaps = 93/816 (11%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ E PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-----SPDP------- 177
C + GH+HYVM +F+PK+ + SASLD+T+++W++G S P
Sbjct: 124 SR-TCISVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSASPADDLMRF 181
Query: 178 ---------------NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC 221
+ L+ H +GVN + P +++G+DD K+W +TK+
Sbjct: 182 SQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
Query: 222 -VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
V TL GH +NVS+V FH + II++ SED ++R+W AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVH 299
Query: 281 KSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT--- 337
+ G+D G I+ K+ RE P ++ + + +AK ++ YE +
Sbjct: 300 PEINLLAAGHDNGMIVFKLERERPAFAL-SGDSLFYAKDRFLRY---------YEYSTQK 349
Query: 338 DGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD---GEYIIYT--------ALAWRN 386
D + +P+ + + P++L ++P V++C D G Y +Y + ++
Sbjct: 350 DSQVIPIRRPGTPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQD 409
Query: 387 RSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQE---KRSVRPTFSAERIYGGTLLAMC 443
G+ V+ + +AV E S+ ++ KN + K+S P + Y GT +C
Sbjct: 410 AKRGTGGSAVFIARNRFAVLEKSTS-QVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLC 468
Query: 444 -SNDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLD 501
S D + +D + ++ + V+ + W++ + VA+ S + I
Sbjct: 469 RSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMESVALLSKHTIII------------- 515
Query: 502 SGKPVDEQGVEDAFELLHETNERVRTGLWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLD 559
+ K + Q LHET RV++G W + FIY + + YC+ G+ + LD
Sbjct: 516 ASKKLVLQCT------LHET-IRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLD 567
Query: 560 RPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHH 619
P+Y+ S + ++ +D++ T+ + +K ++R + ++ +
Sbjct: 568 VPIYITK--VSGNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQLCGQ 625
Query: 620 NSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAM 679
+A +L+ +G E A+ D RF LA++ G + VA ATE+ + W +LG A+
Sbjct: 626 AMIA-YLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATEINEKDHWYRLGVEAL 684
Query: 680 STGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVA--FLCLFMLG 737
G + E +Q + L LY G+ + +SKL +A + KNNV F LG
Sbjct: 685 RQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIA--EVKNNVMGQFHNALYLG 742
Query: 738 KLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAI 773
+++ +++L + +P A + A + + ++E +AI
Sbjct: 743 DVKERVKILENAGHLPLAYITASVHGLTDIAERLAI 778
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 286 bits (733), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 220/817 (26%), Positives = 389/817 (47%), Gaps = 97/817 (11%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ E PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
C + GH+HYVM +F+PK+ + SASLD+T+++W++G SP +
Sbjct: 124 SR-TCVSVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDIMRL 181
Query: 179 ----------------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY-QTKSC 221
+ L+ H +GVN + P +++G+DD K+W +TK+
Sbjct: 182 TQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETKAW 239
Query: 222 -VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
V TL GH +NVS+V FH + II++ SED ++R+W AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVH 299
Query: 281 KSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVT--- 337
+ G+D G I+ K+ RE P ++ + + +AK ++ YE +
Sbjct: 300 PEMNLLAAGHDSGMIVFKLERERPAFAL-SGDSLFYAKDRFLRY---------YEYSTQR 349
Query: 338 DGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD---GEYIIYT--------ALAWRN 386
D + +P+ + + P++L ++P V++C D G Y +Y + ++
Sbjct: 350 DSQVIPIRRPGTPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQD 409
Query: 387 RSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQE---KRSVRPTFSAERIYGGTLLAMC 443
G+ V+ + +AV E S+ ++ KN + K+S P + Y GT +C
Sbjct: 410 AKRGTGGSAVFIARNRFAVLEKSTS-QVLVKNLKNEVVKKSPLPIPTDAIFYAGTGNLLC 468
Query: 444 -SNDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLD 501
S D + +D + ++ + V+ + W+ + VA+ S + I
Sbjct: 469 RSEDKVVIFDLQQRLVLGELQTPFVRYVVWSSDMESVALLSKHTIII------------- 515
Query: 502 SGKPVDEQGVEDAFELLHETNERVRTGLWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLD 559
+ K + Q LHET RV++G W + FIY + + YC+ G+ + LD
Sbjct: 516 ASKKLVLQCT------LHET-IRVKSGAWDDNGVFIYTTLN-HIKYCLPNGDSGIIRTLD 567
Query: 560 RPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEH- 618
P+Y+ S + ++ +D++ T+ + +K ++R +R + ++ I
Sbjct: 568 VPIYITK--VSGNTIFCLDRDGKNKAITINATEYIFKLSLLR---KRYDHVMSMIKNSQL 622
Query: 619 -HNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGEL 677
++ +L+ +G E A+ D RF LA++ G + VA AT++ + W +LG
Sbjct: 623 CGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATQINEKDHWYRLGVE 682
Query: 678 AMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVA--FLCLFM 735
A+ G + E +Q + L LY G+ + +SKL +A + KNNV F
Sbjct: 683 ALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIA--EVKNNVMGQFHNALY 740
Query: 736 LGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVA 772
LG +++ +++L + +P A + A + + ++E +A
Sbjct: 741 LGDVKERVKILENAGHLPLAYITASVHGLNDIAERLA 777
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 286 bits (731), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 240/936 (25%), Positives = 421/936 (44%), Gaps = 130/936 (13%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ + PVR F A +
Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
C + GH+HYVM +F+PK+ + SASLD+T+++W++G SP +
Sbjct: 124 SR-TCVAVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
Query: 179 ----------------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC- 221
+ L+ H +GVN + P +++G+DD K+W
Sbjct: 182 TQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKLWRMNDTKAW 239
Query: 222 -VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
V TL GH +NVS V FH + II++ SED ++RIW AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAH 299
Query: 281 KSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGE 340
+ G+D G I+ K+ RE P S+ SG ++ + +E T +
Sbjct: 300 PEMNLLAAGHDSGMIVFKLERERPAFSV--SGDTVFYVKDRFLRF--------FEFTTQK 349
Query: 341 RLPLA-VKELGTCDL--YPQSLKHNPNGRFVVVCGD---GEYIIYT--------ALAWRN 386
+ LA ++ G+ L P++L ++P V++C D G Y +Y A ++
Sbjct: 350 EVQLAPIRRPGSVSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQD 409
Query: 387 RSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQE---KRSVRPTFSAERIYGGTLLAMC 443
G+ V+ + +AV E SS ++ KN + K+S P + Y GT +C
Sbjct: 410 AKKGAGGSAVFVARNRFAVLEKSSN-QVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLC 468
Query: 444 -SNDFICFYDWAECRLIRRIDV-TVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLD 501
+ D + +D + ++ + +VK + W+ + VA+ S + I N+ +V
Sbjct: 469 KAEDRVTIFDLQQRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIA--NKKLVHRC-- 524
Query: 502 SGKPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLD 559
LHET RV++G W FIY + + YC+ G+ + LD
Sbjct: 525 ---------------TLHETI-RVKSGAWDENGVFIYTTLN-HIKYCLPNGDSGIIKTLD 567
Query: 560 RPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEH- 618
P+Y+ + + ++ +D++ T+ S +K ++R +R + ++ I
Sbjct: 568 VPIYITRVIGNN--IFCLDRDGKNKLVTVDASEYIFKLALLR---KRYDHVMSMIKNSQL 622
Query: 619 -HNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGEL 677
+V +L+ +G E A+ D RF LA++ G +++A A E+ + W +LG
Sbjct: 623 CGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIE 682
Query: 678 AMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLG 737
A+ G + + E ++ + L LY G + + + +A + F LG
Sbjct: 683 ALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLG 742
Query: 738 KLEDCLQLLVESNRIPEAALMARSYLPSKVSE-IVAIWRKDLQKVNPKAAESLADPEEYS 796
+++L + ++P A + A ++ +++++ + A +++ + A SL P
Sbjct: 743 DALKRVEILENAGQLPLAYITATTHGLTEIADRLAAELGENIPSLPEGKARSLLIPPAPL 802
Query: 797 NLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTLENGD- 855
DW + R +H E ++ K+ ++EE+D D
Sbjct: 803 TASGDWPL----------LRVMHGIFEGGLDATGKA-----------ELEEDDEAAGADW 841
Query: 856 -------------LAHEGSEQNGEEN-AEEQNGEEG 877
+A+ G + EE A E++GEEG
Sbjct: 842 GDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEG 877
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 286 bits (731), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 238/936 (25%), Positives = 418/936 (44%), Gaps = 130/936 (13%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ + PVR F A +
Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
C + GH+HYVM +F+PK+ + SASLD+T+++W++ SP +
Sbjct: 124 SR-TCVAVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDISALRKKSVSPADDILRL 181
Query: 179 ----------------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC- 221
+ L+ H +GVN + P +++G+DD K+W
Sbjct: 182 TQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKIWRMNDTKAW 239
Query: 222 -VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
V TL GH +NVS V FH + II++ SED ++RIW AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAH 299
Query: 281 KSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGE 340
+ G+D G I+ K+ RE P S+ SG ++ + +E T +
Sbjct: 300 PEMNLLAAGHDSGMIVFKLERERPAFSV--SGDTVFYVKDRFLRF--------FEFTTQK 349
Query: 341 RLPLA-VKELGTCDL--YPQSLKHNPNGRFVVVCGD---GEYIIYT--------ALAWRN 386
+ LA ++ G+ L P++L ++P V++C D G Y +Y A ++
Sbjct: 350 EVQLAPIRRPGSVSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQD 409
Query: 387 RSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQE---KRSVRPTFSAERIYGGTLLAMC 443
G+ V+ + +AV E SS ++ +N + K+S P + Y GT +C
Sbjct: 410 AKKGAGGSAVFVARNRFAVLEKSSN-QVLVRNLKNEIVKKSPLPIATDAIYYAGTGSLLC 468
Query: 444 -SNDFICFYDWAECRLIRRIDV-TVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLD 501
+ D + +D + ++ + +VK + W S D+ ++A + ++ N+ +V
Sbjct: 469 KAEDRVTIFDLQQRLILGELQAPSVKYVVW--SSDMESVALLSKHAVVIANKKLVHRC-- 524
Query: 502 SGKPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLD 559
LHET RV++G W FIY + + YC+ G+ + LD
Sbjct: 525 ---------------TLHETI-RVKSGAWDENGVFIYTTLN-HIKYCLPNGDSGIIKTLD 567
Query: 560 RPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEH- 618
P+Y+ + + ++ +D++ T+ S +K ++R +R + ++ I
Sbjct: 568 VPIYITRVIGNN--IFCLDRDGKNKLVTVDASEYIFKLALLR---KRYDHVMSMIKNSQL 622
Query: 619 -HNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGEL 677
+V +L+ +G E A+ D RF LA++ G +++A A E+ + W +LG
Sbjct: 623 CGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIE 682
Query: 678 AMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLG 737
A+ G + + E ++ + L LY G + + + +A + F LG
Sbjct: 683 ALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLG 742
Query: 738 KLEDCLQLLVESNRIPEAALMARSYLPSKVSE-IVAIWRKDLQKVNPKAAESLADPEEYS 796
+++L + ++P A + A ++ +++++ + A +++ + A SL P
Sbjct: 743 DAMKRVEILENAGQLPLAYITATTHGLTEIADRLAAELGENIPSLPEGKARSLLIPPAPL 802
Query: 797 NLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTLENGDL 856
DW + + RG+ D A ++EE+D D
Sbjct: 803 TASGDWPLLRVM-------RGIFEGGLDATGKA--------------ELEEDDEAAGADW 841
Query: 857 AHEG--------SEQNG-------EENAEEQNGEEG 877
EG + NG E A E++GEEG
Sbjct: 842 GDEGLDIVDASEAMANGGDGFDAEEGEANEEDGEEG 877
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 215/849 (25%), Positives = 380/849 (44%), Gaps = 106/849 (12%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
+E+ K RS R K V HP++PWIL SL++G + +W+Y+ T+ F+ + PVR
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA 60
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + V+G DD + V+NY + + H DY+R H P++LS SDD I+
Sbjct: 61 FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Query: 125 LWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL------------ 172
+W+W+ C I GHSHYVM F+P + + SASLD+T+++W++
Sbjct: 121 IWNWQSR-NCIAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVWDISGLRMKNAAPVS 178
Query: 173 -------------------GSPDP--NFTLDAHQKGVN-CVDYFTGGDKPYLITGSDDHT 210
GS D F L+ H +GVN C + T P +++ DD
Sbjct: 179 MSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPT---LPLILSAGDDRL 235
Query: 211 AKVWDYQTKSC--VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
K+W V T GH +NVS FHP +I++ SED T+R+W T
Sbjct: 236 VKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFR 295
Query: 269 YGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIK 328
+R W I +D G ++ K+ RE P +++ N + VN +
Sbjct: 296 RDNDRFWFITVHPKLNLFAAAHDSGVMVFKLERERPAHALNI---------NTLLYVNKE 346
Query: 329 SVGADYEVTDGERLPLA-VKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNR 387
Y++ + +A VK LG+ L P+SL +NP + ++ + +Y + +R
Sbjct: 347 KSIVSYDLLRAQSTTVASVKHLGSAWLPPRSLSYNPAEKVALLTSSADNGVYELVNVSSR 406
Query: 388 SFGSALEFVWSSDGEYAVRESSSKIKIFS----------------KNFQEKRSVRPTFSA 431
S L+ G+ A+ + ++ +FS K Q R F A
Sbjct: 407 SNSLPLKDNIKGPGDDAIFVARNRFAVFSRSDQTIEIKDLSNKVTKTIQLPEKTRDIFFA 466
Query: 432 ERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILK 490
G LL+ + + +D + +++ + VK + W++ A+ YI+K
Sbjct: 467 G--MGHVLLSTATQ--VHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVK 522
Query: 491 YNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLNYCV-G 549
N +++++ +HET R+++ +WV + + + L Y +
Sbjct: 523 KNLELITS-------------------IHET-IRIKSAVWVENNVLLYATLDHLKYALMS 562
Query: 550 GEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANE 609
G+ + L+ +YL+ A + V+ +++ + + + + +K ++R D E+
Sbjct: 563 GDTGVIKTLESTLYLVK--AKGNMVFALNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLH 620
Query: 610 ILPSIPKEHHNSVAR----FLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEV 665
++ ++ N V + +L+ +G E A++ DP RFELA++ G LE A E+A +
Sbjct: 621 LI-----QNSNLVGQAIIAYLQKKGYPEIALQFVEDPSTRFELALECGNLETALELARTI 675
Query: 666 QSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGK 725
W +L AMS G ++AE ++ L LY G+AE + K+A +A+++
Sbjct: 676 DRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITGNAEKLQKMAIIAEKRND 735
Query: 726 NNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY-LPSKVSEIVAIWRKDLQKVN-P 783
F L ++E + +L ++ P A L A+S L K +I++ K +++ P
Sbjct: 736 TLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKAQQILSHCNKTEEEIKLP 795
Query: 784 KAAESLADP 792
+ P
Sbjct: 796 SLGSAFTTP 804
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 237/936 (25%), Positives = 416/936 (44%), Gaps = 130/936 (13%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWILASL+SG + +W+Y+ T+ F+ + PVR F A +
Sbjct: 4 KFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY T + H DYIR V H P+++S+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-------SPDPN---- 178
C + GH+HYVM +F+PK+ + SASLD+T+++W++G SP +
Sbjct: 124 SR-TCVAVLTGHNHYVMCASFHPKE-DLVVSASLDQTVRVWDIGALRKKTVSPADDILRL 181
Query: 179 ----------------FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC- 221
+ L+ H +GVN + P +++G+DD K+W
Sbjct: 182 TQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKLWRMNDTKAW 239
Query: 222 -VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYM 280
V TL GH +NVS V FH + II++ SED ++R+W AT T +R W +
Sbjct: 240 EVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAH 299
Query: 281 KSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGE 340
+ G+D G I+ K+ RE P S+ SG ++ + +E + +
Sbjct: 300 PEMNLLAAGHDNGMIVFKLERERPAFSV--SGDTVFYVKDRFLRF--------FEYSTQK 349
Query: 341 RLPLA-VKELGTCDL--YPQSLKHNPNGRFVVVCGDGE------YIIYTALAWRNRSF-- 389
+ LA ++ G+ L P++L ++P V++C D + YI+ A R
Sbjct: 350 EVQLAPIRRPGSVSLNQSPRTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRTDYLQE 409
Query: 390 ---GSALEFVWSSDGEYAVRESSSKIKIFSKNFQE---KRSVRPTFSAERIYGGTLLAMC 443
G+ V+ + +AV E SS ++ KN + K+S P Y GT +C
Sbjct: 410 AKKGAGGSAVFVARNRFAVLEKSSN-QVLVKNLKNEIVKKSPLPIAMDAIYYAGTGNLLC 468
Query: 444 -SNDFICFYDWAECRLIRRIDV-TVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLD 501
+ D + +D + ++ + VK + W S D+ +IA + ++ N+ +V
Sbjct: 469 KAEDRVTIFDLQQRLILGELQAPAVKYVVW--SSDMESIALLSKHAVVIANKKLVHRC-- 524
Query: 502 SGKPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLD 559
LHET RV++G W FIY + + YC+ G+ + LD
Sbjct: 525 ---------------TLHETI-RVKSGAWDENGVFIYTTLN-HIKYCLPNGDSGIIKTLD 567
Query: 560 RPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEH- 618
P+Y+ + + ++ +D++ T+ S +K ++R +R + ++ I
Sbjct: 568 VPIYITRAIGNN--IFCLDRDGKNKLITVDASEYIFKLALLR---KRYDHVMSMIKNSQL 622
Query: 619 -HNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGEL 677
+V +L+ +G E A+ D RF LA++ G +++A A E+ + W +LG
Sbjct: 623 CGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIE 682
Query: 678 AMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLG 737
A+ G + + E ++ + L LY G + + + +A + F LG
Sbjct: 683 ALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLG 742
Query: 738 KLEDCLQLLVESNRIPEAALMARSYLPSKVSE-IVAIWRKDLQKVNPKAAESLADPEEYS 796
+++L + ++P A + A ++ +++++ + A +++ + SL P
Sbjct: 743 DAMKRVEILENAGQLPLAYITAATHGLTEIADRLAAELGENIPSLPEGKTRSLLIPPAPL 802
Query: 797 NLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAFRHMQIEEEDTLENGD- 855
DW + + RG+ D A ++EE+D D
Sbjct: 803 TASGDWPLLRVM-------RGIFEGGLDATGKA--------------ELEEDDEAAGADW 841
Query: 856 -------------LAHEGSEQNGEEN-AEEQNGEEG 877
+A+ G + EE A E++GEEG
Sbjct: 842 GDEDLDMVDASEAMANGGDGFDAEEGEANEEDGEEG 877
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 207/791 (26%), Positives = 368/791 (46%), Gaps = 103/791 (13%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K ++ RVK + HP+ PWILASL+SG++ +++Y+ +T+ + F+ E PVR F +
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + + H DYIR V H P+++SSSDDM+I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGS-------------PD 176
C GH+HYVM F+PKD + SASLD+TI+IW++ D
Sbjct: 124 SR-TCIAELNGHNHYVMSALFHPKD-DLVVSASLDQTIRIWDISGLKKKMTTVKPYREND 181
Query: 177 P--------------NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV 222
P +L+ H +GVN + +PY+++ SDDH K+W V
Sbjct: 182 PMRLQDELFGTDISVRLSLEGHDRGVNWASFHP--TQPYIVSASDDHQVKLWR-MNDPIV 238
Query: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKS 282
T GH +NVS FHP +II+ SED T+R+W + + +R W + +
Sbjct: 239 DTFRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPN 298
Query: 283 SRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERL 342
G+D G I+ K+ RE P+ + + + K + + ++ G + +L
Sbjct: 299 QNLFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQA-GRTVSLFHISKL 357
Query: 343 PLAVKELGTCDLYPQSLKHNPNGRFVVVCGD---GEYIIYTALAWR----NRSFGSALEF 395
P GT Q++ +N R ++V D G Y +Y N G+ +
Sbjct: 358 P---SNNGT-----QTMSYNQTERAILVSSDAEGGSYHLYKIPPKDSNTVNTKKGTGVAA 409
Query: 396 VWSSDGEYAVRESSSKIKIFSKNFQEKRSVRPTFSAERIY----GGTLLAMCSNDFICFY 451
++ +AV + + + I +E + + F+ + IY GT+L + S D I +
Sbjct: 410 IFVGRDRFAVLDKGNNVVIRDLENEEIKRCQIPFTIDWIYPSGSPGTIL-IQSEDKIHMF 468
Query: 452 DWAECRLIRRIDV-TVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQG 510
D + +++ I V V+ + W+ + VA T +I+ N+ +
Sbjct: 469 DIQQKKMLCEIQVHGVRYVIWSKDRNYVAFL--TRDFIVLANKKL--------------- 511
Query: 511 VEDAFELLHETNERVRTGLWVGD-CFIYNNSSWRLNYCV-GGEVTTMFHLDRPMYLLGYL 568
+ ++HET ++G+W + FIY+ S+ L Y + G+ T+ L+ +Y+ G
Sbjct: 512 --EQICMIHET-VLPKSGVWDDNGVFIYSTSN-HLKYLLQNGDNGTIRTLESTIYITG-- 565
Query: 569 ASQSRVYLIDKEF-------NVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHH-- 619
++V+ ID+EF + Y L LSL++ + N+++ +I +E+
Sbjct: 566 VKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQ----------QNYNQVM-TILRENRLV 614
Query: 620 -NSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELA 678
++ +L+ +G + + D RF LA+ G +++A A + + W +LG A
Sbjct: 615 GKAIIAYLQKKGY-PDVVHFVKDDRTRFNLALDAGNIDIALSSAKILDDKDCWNRLGVEA 673
Query: 679 MSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLGK 738
+ G ++ E + + L LY +G+ + K+ S + F LG
Sbjct: 674 LKQGNYQVVEMAYSRTSEFDRLSFLYLLVGNLSTLKKMISYESSDIMSRFHF--SLYLGD 731
Query: 739 LEDCLQLLVES 749
+E+ +++L E+
Sbjct: 732 VEERIKILQEA 742
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 2 PLRLE---------IKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKS 52
P+RL+ ++ L V HP++P+I+++ V +W + + +
Sbjct: 182 PMRLQDELFGTDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWR-MNDPIVDT 240
Query: 53 FEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP 112
F V A F R+ +++ ++D IRV++ V + D +A HP
Sbjct: 241 FRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQN 300
Query: 113 YVLSSSDDMLI 123
+ D +I
Sbjct: 301 LFAAGHDSGMI 311
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 204/803 (25%), Positives = 364/803 (45%), Gaps = 91/803 (11%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPTE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK----------------------PYLITGSDDHTAKVWDYQTKSC-- 221
+G+ VD F D P +++G+DD K+W
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE 241
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
V T GH +NVS FHP +I++ SED ++R+W + T +R W +
Sbjct: 242 VDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301
Query: 282 SSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVG--ADYEVTDG 339
+ G+D G I+ K+ RE P ++ + + + K ++ ++ S A ++ G
Sbjct: 302 NLNLFAAGHDGGMIVFKLERERPAYAV-HGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 340 ERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG------DGEYIIYTALAWRNR------ 387
+ P+ ++ +NP V++C + Y +YT +
Sbjct: 361 SKFPVF------------NMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAP 408
Query: 388 --SFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEKRSVRPTFSAERIYGGT-LLAMCS 444
S L VW + +AV + + I + + + V+ E Y GT L +
Sbjct: 409 EGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRD 468
Query: 445 NDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSG 503
D I +D + R + + ++ VK + W S D+ +A I+ NR +
Sbjct: 469 ADSITLFDVQQKRTLASVKISKVKYVIW--SADMSHVALLAKHAIVICNRKL-------- 518
Query: 504 KPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLDRP 561
DA +HE N RV++G W FIY S+ + Y V G+ + LD P
Sbjct: 519 ---------DALCNIHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLP 567
Query: 562 MYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHH 619
+Y+ + VY +D+E T+ + ++K ++ + +E+L + K
Sbjct: 568 IYVTR--VKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVG 622
Query: 620 NSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAM 679
S+ +L+ +G E A+ D RF LA++ G +E+A E A + ++ W++LGE+A+
Sbjct: 623 QSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVAL 682
Query: 680 STGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLGKL 739
G ++ E C ++ + L LY G+ E + K+ +A+ + + + LG +
Sbjct: 683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742
Query: 740 EDCLQLLVESNRIPEAALMARSY 762
+ +++L + A L A ++
Sbjct: 743 SERVRILKNCGQKSLAYLTAATH 765
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 203/803 (25%), Positives = 364/803 (45%), Gaps = 91/803 (11%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK----------------------PYLITGSDDHTAKVWDYQTKSC-- 221
+G+ VD F D P +++G+DD K+W
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE 241
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
V T GH +NVS FHP +I++ SED ++R+W + T +R W +
Sbjct: 242 VDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301
Query: 282 SSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVG--ADYEVTDG 339
+ G+D G I+ K+ RE P ++ + + + K ++ ++ S A ++ G
Sbjct: 302 NLNLFAAGHDGGMIVFKLERERPAYAV-HGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 340 ERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG------DGEYIIYTALAWRNR------ 387
+ P+ ++ +NP V++C + Y +YT +
Sbjct: 361 SKFPVF------------NMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAP 408
Query: 388 --SFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEKRSVRPTFSAERIYGGT-LLAMCS 444
S L VW + +AV + + I + + + ++ E Y GT L +
Sbjct: 409 EGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRD 468
Query: 445 NDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSG 503
D I +D + R + + ++ VK + W S D+ +A I+ NR +
Sbjct: 469 ADSITLFDVQQKRTLASVKISKVKYVIW--SADMSHVALLAKHAIVICNRKL-------- 518
Query: 504 KPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLDRP 561
DA +HE N RV++G W FIY S+ + Y V G+ + LD P
Sbjct: 519 ---------DALCNIHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDHGIIRTLDLP 567
Query: 562 MYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHH 619
+Y+ + VY +D+E T+ + ++K ++ + +E+L + K
Sbjct: 568 IYVTR--VKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVG 622
Query: 620 NSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAM 679
S+ +L+ +G E A+ D RF LA++ G +E+A E A + ++ W++LGE+A+
Sbjct: 623 QSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVAL 682
Query: 680 STGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLGKL 739
G ++ E C ++ + L LY G+ E + K+ +A+ + + + LG +
Sbjct: 683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742
Query: 740 EDCLQLLVESNRIPEAALMARSY 762
+ +++L + A L A ++
Sbjct: 743 SERVRILKNCGQKSLAYLSAATH 765
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 260 bits (664), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 203/803 (25%), Positives = 364/803 (45%), Gaps = 91/803 (11%)
Query: 10 KLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARK 69
K +S RVK + HP PWIL SL++G + +W+Y+ T+ F+ + PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
V+G DD I+V+NY + H DYIR H P++LS+SDD I++W+W+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL-GSPDPNFT---LDAHQ 185
C + GH+HYVM F+P + + SASLD+T+++W++ G N + +++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSE-DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYFTGGDK----------------------PYLITGSDDHTAKVWDYQTKSC-- 221
+G+ VD F D P +++G+DD K+W
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWE 241
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
V T GH +NVS FHP +I++ SED ++R+W + T +R W +
Sbjct: 242 VDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301
Query: 282 SSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVG--ADYEVTDG 339
+ G+D G I+ K+ RE P ++ + + + K ++ ++ S A ++ G
Sbjct: 302 NLNLFAAGHDGGMIVFKLERERPAYAV-HGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG 360
Query: 340 ERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG------DGEYIIYTALAWRNR------ 387
+ P+ S+ +NP V++C + Y +YT +
Sbjct: 361 SKFPVF------------SMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADTQNPDAP 408
Query: 388 --SFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEKRSVRPTFSAERIYGGT-LLAMCS 444
S L VW + +AV + + I + + + V+ E Y GT L +
Sbjct: 409 EGKRSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRD 468
Query: 445 NDFICFYDWAECRLIRRIDVT-VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSG 503
+ I +D + R + + ++ VK + W S D+ +A I+ NR +
Sbjct: 469 AESITLFDVQQKRTLASVKISKVKYVIW--SADMSHVALLAKHAIVICNRKL-------- 518
Query: 504 KPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCV-GGEVTTMFHLDRP 561
+A +HE N RV++G W FIY S+ + Y V G+ + LD P
Sbjct: 519 ---------EALCNIHE-NIRVKSGAWDESGVFIYTTSN-HIKYAVTTGDYGIIRTLDLP 567
Query: 562 MYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSI--PKEHH 619
+Y+ + VY +D+E T+ + ++K ++ + +E+L + K
Sbjct: 568 IYVTR--VKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN---RKYDEVLHMVRNAKLVG 622
Query: 620 NSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAM 679
S+ +L+ +G E A+ D RF LA++ G +E+A E A + ++ W++LGE+A+
Sbjct: 623 QSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVAL 682
Query: 680 STGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLGKL 739
G ++ E C ++ + L LY G+ E + K+ +A+ + + + LG +
Sbjct: 683 LQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDV 742
Query: 740 EDCLQLLVESNRIPEAALMARSY 762
+ +++L + A L A ++
Sbjct: 743 SERVRILKNCGQKSLAYLTAATH 765
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 243 bits (619), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 201/812 (24%), Positives = 355/812 (43%), Gaps = 99/812 (12%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
+++ K +S R K + HPS PW+L +L+S T+ +W+Y+ T+ FE E PVR
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIK 124
F + V+ DD I+V++ +T + H DY+R V H LP+++S+SDD I+
Sbjct: 61 FHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIR 120
Query: 125 LWDWE--KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN----------- 171
+W+W+ K C GH+H+VM F+P D + SASLD TI+IW+
Sbjct: 121 IWNWQNRKEIAC---LTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAP 176
Query: 172 -------------------LGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
LG F L+ H +GVN + P +++GSDD K
Sbjct: 177 GTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPT--LPLIVSGSDDRQVK 234
Query: 213 VWDYQTKSC--VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG 270
+W V T GHT+NV +V FHP +II+ ED T+R+W
Sbjct: 235 LWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRE 294
Query: 271 LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSV 330
+R W I +D G ++ K+ RE P + + + +IQ+ N +
Sbjct: 295 NDRFWLIAAHPHINLFGAAHDSGIMVFKLDRERPCSFIHQNQLFFVNAEKQIQSFNFQKR 354
Query: 331 GADYEVTDGERLPLA-VKELGTCDLYPQSLKHNP----------NGRFVVV------CGD 373
A LP A +K +G +S+ +NP NG+F +V G
Sbjct: 355 VAS--------LPYASLKGIGQPWDAFRSISYNPSQHSVLVNEANGKFALVILPKQPVGA 406
Query: 374 GEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEKRSVRPTFSAER 433
E T +F FV + +V S + K+ ++N + + +VR +A
Sbjct: 407 VEPTSVTQDTGNFATFVGRNRFVVYNKNTESVEVRSLENKV-TRNIKVEETVRTIVAAG- 464
Query: 434 IYGGTLLAMCSNDFICFYDWAECRLIRRIDV-TVKNLYWADSGDLVAIASDTSFYILKYN 492
G++L + + I YD + + + ++ V VK + W+ G VA+ S + +
Sbjct: 465 --PGSVLVIHPREVI-LYDVQQGKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKK 521
Query: 493 RDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLW-VGDCFIYNNSSWRLNYCVGGE 551
+++++ +HET R+++ W IY+ + + G+
Sbjct: 522 LELINS-------------------MHETI-RIKSAAWDETGVLIYSTLNHIRYSLLNGD 561
Query: 552 VTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEIL 611
+ L++ +Y+ VY +++E + T+ + +K ++ + E+L
Sbjct: 562 RGIIKTLEKTLYITK--VQGKLVYCLNREGEIEILTIDPTEYRFKKALVNKNFP---EVL 616
Query: 612 PSIPKEH--HNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSES 669
I + ++ +L+ G E A++ DP RF+LA++ G L+VA + A ++ S
Sbjct: 617 RLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRFDLALEYGNLDVALDEAKKLNDSS 676
Query: 670 KWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVA 729
W++L + A++ G +AE + L LY GD +SK+ ++A+ +
Sbjct: 677 TWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSM 736
Query: 730 FLCLFMLGKLEDCLQLLVESNRIPEAALMARS 761
L F ++ + E +P A +A++
Sbjct: 737 LLNTFYNNSTKERSSIFAEGGSLPLAYAVAKA 768
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
T+ IW+ S T ++ E V S F ++ V +G+DD I++++ + + E
Sbjct: 864 TIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEG 923
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
H ++ VA P V S SDD IK+WD G CTQ EGH V+ V F+P D
Sbjct: 924 HGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASG-TCTQTLEGHGSSVLSVAFSP-DGQR 981
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D+TIKIW+ S TL+ H V V + G + + +GSDD T K+WD
Sbjct: 982 VASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR--VASGSDDKTIKIWDTA 1039
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
+ +C QTLEGH V +V F P+ + +GS+D T++IW A + TL + VW++
Sbjct: 1040 SGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSV 1099
Query: 278 GYMKSSRRIVIGYDEGTIMV 297
+ +R+ G +GTI +
Sbjct: 1100 AFSPDGQRVASGSIDGTIKI 1119
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P + + T+ IW+ S T ++ E V+S F Q V +G+D
Sbjct: 886 VWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD 945
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I++++ + + E H + VA P V S S D IK+WD G CTQ
Sbjct: 946 DHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASG-TCTQT 1004
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
EGH V V F+P D AS S D+TIKIW+ S TL+ H V V + G
Sbjct: 1005 LEGHGGSVWSVAFSP-DGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDG 1063
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ + +GSDDHT K+WD + +C QTLEGH +V +V F P+ + +GS DGT++IW
Sbjct: 1064 QR--VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWD 1121
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
A + TL V ++ + +R+ G +GTI +
Sbjct: 1122 AASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKI 1161
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 136/281 (48%), Gaps = 4/281 (1%)
Query: 17 RVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGA 76
RV+SV P + + T+ IW+ S T ++ E V S F Q V +G+
Sbjct: 927 RVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGS 986
Query: 77 DDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQ 136
D I++++ + + E H + VA P V S SDD IK+WD G CTQ
Sbjct: 987 GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG-TCTQ 1045
Query: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
EGH +V V F+P D AS S D TIKIW+ S TL+ H V V +
Sbjct: 1046 TLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPD 1104
Query: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
G + + +GS D T K+WD + +C QTLEGH V +V F P+ + +GS DGT++IW
Sbjct: 1105 GQR--VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162
Query: 257 HATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
A + TL V ++ + +R+ G + TI +
Sbjct: 1163 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKI 1203
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 4/289 (1%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
+ L V SV P + + T+ IW+ S T ++ E V S F
Sbjct: 961 QTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPD 1020
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Q V +G+DD I++++ + + E H +++ V P V S SDD IK+WD
Sbjct: 1021 GQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDA 1080
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
G CTQ EGH V V F+P D AS S+D TIKIW+ S TL+ H V
Sbjct: 1081 VSG-TCTQTLEGHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWV 1138
Query: 189 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGS 248
+ V + G + + +GS D T K+WD + +C QTLEGH V +V F P+ + +GS
Sbjct: 1139 HSVAFSPDGQR--VASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGS 1196
Query: 249 EDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
D T++IW + TL V ++ + +R+ G + TI +
Sbjct: 1197 SDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKI 1245
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 125/253 (49%), Gaps = 4/253 (1%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P + + T+ IW+ S T ++ E V+S F Q V +G+D
Sbjct: 1012 VWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSD 1071
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D I++++ + + E H D + VA P V S S D IK+WD G CTQ
Sbjct: 1072 DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG-TCTQT 1130
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
EGH +V V F+P D AS S+D TIKIW+ S TL+ H V V + G
Sbjct: 1131 LEGHGGWVHSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDG 1189
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
+ + +GS D T K+WD + +C QTLEGH V +V F P+ + +GS D T++IW
Sbjct: 1190 QR--VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247
Query: 258 ATTYRLENTLNYG 270
+ TLN G
Sbjct: 1248 TASGTCTQTLNVG 1260
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 127/256 (49%), Gaps = 8/256 (3%)
Query: 42 WNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDY 101
WN +QT+ E V S F A Q V +G+DD I++++ + + E H
Sbjct: 830 WNACTQTL----EGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGS 885
Query: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
+ VA P V S SDD IK+WD G CTQ EGH V V F+P D AS
Sbjct: 886 VWSVAFSPDRERVASGSDDKTIKIWDAASG-TCTQTLEGHGGRVQSVAFSP-DGQRVASG 943
Query: 162 SLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSC 221
S D TIKIW+ S TL+ H V V + G + + +GS D T K+WD + +C
Sbjct: 944 SDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQR--VASGSGDKTIKIWDTASGTC 1001
Query: 222 VQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMK 281
QTLEGH +V +V F P+ + +GS+D T++IW + TL V ++ +
Sbjct: 1002 TQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP 1061
Query: 282 SSRRIVIGYDEGTIMV 297
+R+ G D+ TI +
Sbjct: 1062 DGQRVASGSDDHTIKI 1077
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
+ L + V SV P + + GT+ IW+ S T ++ E V S F
Sbjct: 1087 QTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPD 1146
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Q V +G+ D I++++ + + E H +++ VA P V S S D IK+WD
Sbjct: 1147 GQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDT 1206
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
G CTQ EGH +V V F+P D AS S D TIKIW+ S TL+
Sbjct: 1207 ASG-TCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDNTIKIWDTASGTCTQTLN 1258
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNY 269
T V + + +C QTLEGH +V +V F + + +GS+D T++IW + TL
Sbjct: 822 TISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEG 881
Query: 270 GLERVWAIGYMKSSRRIVIGYDEGTIMV 297
VW++ + R+ G D+ TI +
Sbjct: 882 HGGSVWSVAFSPDRERVASGSDDKTIKI 909
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
+ V HP ++++ T+ IW+Y++ ++ + V+ F + + + + +
Sbjct: 109 ITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSA 168
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
DM I+++++ T + +K H + V P +++S+S D IK+W+ G+ C +
Sbjct: 169 DMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGY-CVKT 227
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY---- 193
F GH +V V N +D + AS S D+T+++W + + + L H+ V C+ +
Sbjct: 228 FTGHREWVRTVRVN-QDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPES 286
Query: 194 -------FTGGDK-----PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241
G +K P+L++GS D T K+WD T C+ TL GH + V V +HP
Sbjct: 287 CNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGG 346
Query: 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
II+ S+D T+R+W R + TL +I + +S+ ++ G + T+ V
Sbjct: 347 KYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKV 402
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKF 65
+ +R L ++ V+ V + + T+ +W++Q+ K+ + V S F
Sbjct: 139 DFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHF 198
Query: 66 VARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKL 125
+ ++++ + D I+++ T VK F H +++R V V+ + S S+D +++
Sbjct: 199 MPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRV 258
Query: 126 WDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT-----------------FASASLDRTIK 168
W C H H V + + P+ N S S D+TIK
Sbjct: 259 WVVANK-ECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIK 317
Query: 169 IWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGH 228
+W++ + TL H V V + GG Y+I+ SDD T +VWDY+ K C +TLE H
Sbjct: 318 MWDISTGVCIMTLVGHDNWVRGVVWHPGGK--YIISASDDKTIRVWDYKNKRCQKTLEAH 375
Query: 229 THNVSAVCFHPELPIIITGSEDGTVRIW 256
H +++ FH P +ITGS D TV++W
Sbjct: 376 QHFCTSIDFHRSAPYVITGSVDQTVKVW 403
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H I V HP ++S+S+D IK+WD+E G + +GH+ V V+F+ +
Sbjct: 102 LSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDF-ERTLKGHTDAVQDVSFD-QQ 159
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + + T+ H V+ V + GD +LI+ S D T K+W
Sbjct: 160 GKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGD--FLISASRDKTIKMW 217
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ T CV+T GH V V + + ++ + S D TVR+W
Sbjct: 218 ELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVW 259
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P+ +++++ T+ +W + K+F VR+ + + + ++
Sbjct: 193 VSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSN 252
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHP------------------TLPYVLSSSD 119
D +RV+ + H + C+A P + P++LS S
Sbjct: 253 DQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSR 312
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
D IK+WD G +C GH ++V V ++P SAS D+TI++W+ +
Sbjct: 313 DKTIKMWDISTG-VCIMTLVGHDNWVRGVVWHP-GGKYIISASDDKTIRVWDYKNKRCQK 370
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
TL+AHQ +D+ PY+ITGS D T KVW+
Sbjct: 371 TLEAHQHFCTSIDFHRSA--PYVITGSVDQTVKVWE 404
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
+L GH ++ V FHP ++++ SED T++IW T E TL
Sbjct: 101 SLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLK 145
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 20/305 (6%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L+ V V HP ++++ T+ +W+Y++ ++ + V+ F +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGK 163
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+ + + DM I+++++ + + ++ H + VA+ P +++S+S D +K+W+
Sbjct: 164 LLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVAT 223
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G+ C + F GH +V V N +D AS S D+T+++W + S + L H+ V C
Sbjct: 224 GY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVEC 281
Query: 191 VDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
+ + +G P+L++GS D T K+WD T C+ TL GH + V
Sbjct: 282 ISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341
Query: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDE 292
V FHP I+T ++D T+RIW R TL V ++ + K++ +V G +
Sbjct: 342 RGVLFHPGGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTGSVD 401
Query: 293 GTIMV 297
T+ V
Sbjct: 402 QTVKV 406
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 24/283 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDLTG 162
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ S + T+ H V+ V GD ++I+ S D T K+W
Sbjct: 163 -KLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGD--HIISASRDKTMKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ T CV+T GH V V + + +I + S D TVR+W + + L V
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + S I + K G+ P + K I +
Sbjct: 280 ECISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTI----------------KMW 323
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377
+V+ G + + L D + + + +P G+F+V C D + +
Sbjct: 324 DVSTG----MCLMTLVGHDNWVRGVLFHPGGKFIVTCADDKTL 362
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL-------- 111
+ + ++D +RV+ + + H + C++ HPT+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILDATSSES 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+P A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHPGGKFIVTCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T++IW+ + TL AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAA--PYVVTGSVDQTVKVWE 408
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ + T+ V
Sbjct: 399 FVDQTVKV 406
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TG D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGFVDQTVKVWE 408
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 139/278 (50%), Gaps = 4/278 (1%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV +P + + TV +W S +F+ V S F + +G+
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ ++ + F+ HT+++ VA +P + S S D ++LW+ C
Sbjct: 1263 DKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSS-KCLHT 1321
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F+GH+ +V VTF+P D AS S D+T+++W++ S + +T H V V +
Sbjct: 1322 FQGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIF--SP 1378
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L +GS D T ++W + C+ TL+GH + V ++ F P+ ++ +GS+D TVR+W+
Sbjct: 1379 DGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWN 1438
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
++ TL+ + V ++ + + G D+ TI
Sbjct: 1439 ISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETI 1476
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V+SV P + + V +W+ S + + VR F + G+
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ ++ + + HT+++ VA P + S S D ++LWD C I
Sbjct: 1137 DQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSS-KCLYI 1195
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
+GH+ +V V FNP D +T AS S D+T+++W + S T H VN V +
Sbjct: 1196 LQGHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVF--NP 1252
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L +GS D T ++WD + C+ T +GHT+ V++V F+P+ ++ +GS D TVR+W
Sbjct: 1253 DGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWE 1312
Query: 258 ATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
++ + +T V ++ + + G D+ T+
Sbjct: 1313 ISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTV 1350
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSD 119
V S F + + +G+DD +R+++ ++ +K F+ HT +R V P + S S
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSS 968
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
D ++LWD G C IF+GH+ +V V FN D + A+ S D+T+++W++ S +
Sbjct: 969 DQTVRLWDISSG-ECLYIFQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDISSSQCFY 1026
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
H V V + D L +GSDD T ++WD + +C+ TL+GHT V +V F P
Sbjct: 1027 IFQGHTSCVRSVVF--SSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP 1084
Query: 240 ELPIIITGSEDGTVRIWHATT 260
+ ++ +G +D VR+W ++
Sbjct: 1085 DGAMLASGGDDQIVRLWDISS 1105
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 115/219 (52%), Gaps = 4/219 (1%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
TV +W+ S F+ VRS F + + +G+DD +R+++ ++ + + +
Sbjct: 1013 TVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQG 1072
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT +R V P + S DD +++LWD G C +G++ +V + F+P T
Sbjct: 1073 HTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSG-NCLYTLQGYTSWVRFLVFSPNGV-T 1130
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
A+ S D+ +++W++ S +TL H VN V + D L +GS D T ++WD
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAF--SPDGATLASGSGDQTVRLWDIS 1188
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
+ C+ L+GHT V++V F+P+ + +GS D TVR+W
Sbjct: 1189 SSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 123/250 (49%), Gaps = 4/250 (1%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV +P + + TV +W+ S +F+ V S F + +G+
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R++ ++ + F+ HT ++ V P + S SDD ++LW G C
Sbjct: 1305 DQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG-ECLYT 1363
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
F GH+++V V F+P D AS S D+T+++W++ S +TL H V + +
Sbjct: 1364 FLGHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVF--SP 1420
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
D L +GSDD T ++W+ + C+ TL GH ++V +V F + I+ +GS+D T+++W
Sbjct: 1421 DGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWD 1480
Query: 258 ATTYRLENTL 267
T TL
Sbjct: 1481 VKTGECIKTL 1490
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 121/248 (48%), Gaps = 4/248 (1%)
Query: 15 SERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVA 74
+ RV+SV P+ + + TV +W+ S F+ V S F +
Sbjct: 948 TSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLAT 1007
Query: 75 GADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMC 134
G+ D +R+++ ++ +F+ HT +R V + S SDD ++LWD G C
Sbjct: 1008 GSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSG-NC 1066
Query: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF 194
+GH+ V V F+P D AS D+ +++W++ S + +TL + V + +
Sbjct: 1067 LYTLQGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFS 1125
Query: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
G L GS D ++WD +K C+ TL+GHT+ V+AV F P+ + +GS D TVR
Sbjct: 1126 PNG--VTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVR 1183
Query: 255 IWHATTYR 262
+W ++ +
Sbjct: 1184 LWDISSSK 1191
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 4/258 (1%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
TV +W+ S K+F+ VRS F + +G+ D +R+++ ++ + + +F+
Sbjct: 929 TVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQG 988
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HT ++ VA + + + S D ++LWD C IF+GH+ V V F+ D
Sbjct: 989 HTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSS-QCFYIFQGHTSCVRSVVFS-SDGAM 1046
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
AS S D+T+++W++ S + +TL H V V + D L +G DD ++WD
Sbjct: 1047 LASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVF--SPDGAMLASGGDDQIVRLWDIS 1104
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
+ +C+ TL+G+T V + F P + GS D VR+W ++ + TL V A+
Sbjct: 1105 SGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAV 1164
Query: 278 GYMKSSRRIVIGYDEGTI 295
+ + G + T+
Sbjct: 1165 AFSPDGATLASGSGDQTV 1182
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV +P + + TV +W S +F+ V S F + +G+D
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSD 1346
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
D +R+++ ++ + + F HT+++ V P + S S D ++LW G C
Sbjct: 1347 DQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG-KCLYT 1405
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG 197
+GH+++V + F+P D AS S D+T+++WN+ S + +TL H V V +
Sbjct: 1406 LQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAF--SS 1462
Query: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLE 226
D L +GSDD T K+WD +T C++TL+
Sbjct: 1463 DGLILASGSDDETIKLWDVKTGECIKTLK 1491
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 17/279 (6%)
Query: 40 CIWNYQSQTMAKS-FEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAH 98
C+ N+ +A S F V + F + G +R + T ++ + H
Sbjct: 847 CV-NFTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGH 905
Query: 99 TDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTF 158
++ V + S SDD ++LWD G C + F+GH+ V V F+P ++
Sbjct: 906 NSWVNSVGFSQDGKMLASGSDDQTVRLWDISSG-QCLKTFKGHTSRVRSVVFSP-NSLML 963
Query: 159 ASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 218
AS S D+T+++W++ S + + H V V + D L TGS D T ++WD +
Sbjct: 964 ASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAF--NLDGSMLATGSGDQTVRLWDISS 1021
Query: 219 KSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIG 278
C +GHT V +V F + ++ +GS+D TVR+W ++ TL G
Sbjct: 1022 SQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQ---------G 1072
Query: 279 YMKSSRRIVIGYDEGTIMVKIGREEPVASMD-NSGKIIW 316
+ R +V D G ++ G ++ V D +SG ++
Sbjct: 1073 HTSCVRSVVFSPD-GAMLASGGDDQIVRLWDISSGNCLY 1110
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++ + T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD C+ TL GH
Sbjct: 279 VECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FHP I++ ++D T+RIW R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 24/283 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++++S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + S I G+ K G+ P + K I +
Sbjct: 280 ECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTI----------------KMW 323
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377
+++ G + + L D + + ++ +P G+F++ C D + I
Sbjct: 324 DISIG----MCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTI 362
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+P + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISIG-MCLMTLVGHDNWVRGVQFHPGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+TI+IW+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D +K+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VATGY-CVKTFTGHREWVRMVRPN-QDGTLLASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FHP +++ ++D T+RIW R TL+ V ++ + K+S +V G
Sbjct: 339 NWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDF-ERTLKGHTDSVQDISFD-QT 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTMKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ T CV+T GH V V + + ++ + S D TVR+W T + L V
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + S I G+ K G+ P + K I +
Sbjct: 280 ECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTI----------------KMW 323
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377
+++ G + + L D + + + +P GRFVV C D + +
Sbjct: 324 DISTG----MCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTL 362
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL-------- 111
+ + ++D +RV+ T + H + C++ HPT+
Sbjct: 242 PNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSEN 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+P + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTG-MCLMTLVGHDNWVRGVLFHPGGRFVVSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T++IW+ + TL AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAS--PYVVTGSVDQTVKVWE 408
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++ + T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD C+ TL GH
Sbjct: 279 VECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FHP I++ ++D T+RIW R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 24/283 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++++S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + S I G+ + G+ P + K I I + VG D
Sbjct: 280 ECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDN 339
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377
V + ++ +P G+F++ C D + I
Sbjct: 340 WV--------------------RGVQFHPGGKFILSCADDKTI 362
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+P + A D
Sbjct: 302 KRSGKPGPFLLSGSRDKTIKMWDISIG-MCLMTLVGHDNWVRGVQFHPGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+TI+IW+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 26/298 (8%)
Query: 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVAR 68
+ L ++ V+ V P + +S T+ +W+ ++ + VRS F A
Sbjct: 762 QTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSAD 821
Query: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Q + +G+ D I+++NY+T + +K + HT+ + +A P ++S S D IKLWD
Sbjct: 822 GQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDC 881
Query: 129 EKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGV 188
+ +C + GH++ V V F+P D T A SLD+++++WN +
Sbjct: 882 QTH-ICIKTLHGHTNEVCSVAFSP-DGQTLACVSLDQSVRLWNC-------------RTG 926
Query: 189 NCVDYFTGG-----------DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
C+ + G D+ L +GS+D T K+WD+QT + +LEGHT + + F
Sbjct: 927 QCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAF 986
Query: 238 HPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTI 295
P+ + + S D +VR+W+ +T + L + V+A+ + + I G + T+
Sbjct: 987 SPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTV 1044
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 119/232 (51%), Gaps = 5/232 (2%)
Query: 30 ILASLYSG-TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88
ILAS + V +W+ + K+ E V S F + + + + D I++++
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQD 757
Query: 89 MDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQV 148
++ HTD++RCVA P + SS+ D IKLWD +G C + + H+ +V V
Sbjct: 758 GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQG-KCLRTLKSHTGWVRSV 816
Query: 149 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDD 208
F+ D T AS S DRTIKIWN + + T H V + Y D L++GS D
Sbjct: 817 AFSA-DGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAY--SPDSKILVSGSGD 873
Query: 209 HTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
T K+WD QT C++TL GHT+ V +V F P+ + S D +VR+W+ T
Sbjct: 874 RTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRT 925
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 60 VRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSD 119
VR F + + + D +++++ +K H + VA HP + S+S
Sbjct: 687 VRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASG 746
Query: 120 DMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
D IKLWD + G C Q GH+ +V V F+P D NT AS++ D TIK+W++
Sbjct: 747 DKTIKLWDIQDG-TCLQTLTGHTDWVRCVAFSP-DGNTLASSAADHTIKLWDVSQGKCLR 804
Query: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
TL +H V V + D L +GS D T K+W+Y T C++T GHT++V ++ + P
Sbjct: 805 TLKSHTGWVRSVAF--SADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGY 279
+ I+++GS D T+++W T+ TL+ V ++ +
Sbjct: 863 DSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAF 902
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 4/260 (1%)
Query: 38 TVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEA 97
TV +W++Q+ S E + F Q + + + D +R++N +T ++
Sbjct: 959 TVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLE 1018
Query: 98 HTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT 157
HTD++ V HP + + S D +KLW+ G C + HS ++ + ++P D
Sbjct: 1019 HTDWVYAVVFHPQGKIIATGSADCTVKLWNISTG-QCLKTLSEHSDKILGMAWSP-DGQL 1076
Query: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
ASAS D+++++W+ + L H V + G+ + T S D T K+WD+Q
Sbjct: 1077 LASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGE--IIATCSTDQTVKIWDWQ 1134
Query: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAI 277
C++TL GHT+ V + F P+ I+ + S D TVRIW T + + V ++
Sbjct: 1135 QGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSV 1194
Query: 278 GYMKSSRRIVIGYDEGTIMV 297
+ + G + T+ +
Sbjct: 1195 AFSPDGEVVASGSQDQTVRI 1214
Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQS-QTMAKSFEVTELPVRSAKFVARK 69
L ++ + + P + ++ +V +WN + Q E T+ V + F +
Sbjct: 974 LEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDW-VYAVVFHPQG 1032
Query: 70 QWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
+ + G+ D ++++N +T +K H+D I +A P + S+S D ++LWD
Sbjct: 1033 KIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCC 1092
Query: 130 KGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
G C I GHS+ V F+P + A+ S D+T+KIW+ TL H V
Sbjct: 1093 TG-RCVGILRGHSNRVYSAIFSP-NGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWV- 1149
Query: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
D D L + S D T ++WD T C GHTH VS+V F P+ ++ +GS+
Sbjct: 1150 -FDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQ 1208
Query: 250 DGTVRIWHATT 260
D TVRIW+ T
Sbjct: 1209 DQTVRIWNVKT 1219
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L + ++ V +V HP I TV +WN + K+ + + Q
Sbjct: 1016 LLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQ 1075
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+ + + D +R+++ T V + H++ + P + + S D +K+WDW++
Sbjct: 1076 LLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ 1135
Query: 131 GWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNC 190
G C + GH+++V + F+P D ASAS D+T++IW++ + + H V+
Sbjct: 1136 G-KCLKTLTGHTNWVFDIAFSP-DGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSS 1193
Query: 191 VDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
V + G+ + +GS D T ++W+ +T C+Q L
Sbjct: 1194 VAFSPDGE--VVASGSQDQTVRIWNVKTGECLQIL 1226
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 94 VFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPK 153
VF I A P + + D +++W+ + G + I GHS++V V F+P
Sbjct: 637 VFTETLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLL-ICRGHSNWVRFVVFSP- 694
Query: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
D AS D +K+W++ TL H+ V V + G+ L + S D T K+
Sbjct: 695 DGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGET--LASASGDKTIKL 752
Query: 214 WDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLER 273
WD Q +C+QTL GHT V V F P+ + + + D T+++W + + TL
Sbjct: 753 WDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGW 812
Query: 274 VWAIGYMKSSRRIVIGYDEGTIMV 297
V ++ + + + G + TI +
Sbjct: 813 VRSVAFSADGQTLASGSGDRTIKI 836
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Query: 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQ 70
L S RV S P+ I TV IW++Q K+ V F +
Sbjct: 1100 LRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGK 1159
Query: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
+ + + D +R+++ NT + HT + VA P V S S D +++W+ +
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKT 1219
Query: 131 GWMCTQIFEGHSHY 144
G C QI Y
Sbjct: 1220 G-ECLQILRAKRLY 1232
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HT 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSTISEATGSETKKSGKPGP 309
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
S S D TIK+W+ + T+ H V+ V GD +L++ S D T K+W
Sbjct: 162 GKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HLVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ ++++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 147/308 (47%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVEDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 21/309 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ + V HP+ +L++ + IW++++ +S + V+ F +
Sbjct: 101 KFSLSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDS 160
Query: 68 RKQWVVAGADDMFIRVYNYN-TMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
+ + + + + D+ I+++++ + D VK H + VA P YVLS+S D IK+W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMW 220
Query: 127 DWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
+ G+ C + + GH ++ V + D N FAS S+D +I+IW++ S D L AH
Sbjct: 221 EVATGY-CVKTYSGHREWIRMVRVH-MDGNIFASCSIDHSIRIWSINSRDCKAELRAHDH 278
Query: 187 GVNCVDYF-----------TGGDK-------PYLITGSDDHTAKVWDYQTKSCVQTLEGH 228
V C+ + G D P+L +GS D T +VWD C+ L GH
Sbjct: 279 TVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLTGH 338
Query: 229 THNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVI 288
+ V + FHP +++ S+D T+R+W R TL ++ + K ++
Sbjct: 339 DNWVRELTFHPGGKYLVSASDDKTIRVWDLRNKRFMKTLYAHQHFCTSVDFHKKLPYVIS 398
Query: 289 GYDEGTIMV 297
G + T+ V
Sbjct: 399 GSVDNTVKV 407
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 25/272 (9%)
Query: 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSG-TVCIWNYQ-SQTMAKSFEVTELPVRSA 63
E +R L + V+ + S+ +LAS + ++ +W++Q S K+ + V S
Sbjct: 141 EYERSLKGHTSSVQDIAF-DSQGKLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSV 199
Query: 64 KFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI 123
FV +V++ + D I+++ T VK + H ++IR V VH S S D I
Sbjct: 200 AFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHREWIRMVRVHMDGNIFASCSIDHSI 259
Query: 124 KLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNT-------------------FASASLD 164
++W C H H V + + P + T AS S D
Sbjct: 260 RIWSINSR-DCKAELRAHDHTVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRD 318
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT 224
+TI++W++G F L H V + + GG YL++ SDD T +VWD + K ++T
Sbjct: 319 KTIRVWDVGVGLCLFVLTGHDNWVRELTFHPGG--KYLVSASDDKTIRVWDLRNKRFMKT 376
Query: 225 LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
L H H ++V FH +LP +I+GS D TV++W
Sbjct: 377 LYAHQHFCTSVDFHKKLPYVISGSVDNTVKVW 408
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V SV P+ ++L++ T+ +W + K++ +R + + +
Sbjct: 196 VSSVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHREWIRMVRVHMDGNIFASCSI 255
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL--------------------PYVLSS 117
D IR+++ N+ D AH + C+A P + P++ S
Sbjct: 256 DHSIRIWSINSRDCKAELRAHDHTVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASG 315
Query: 118 SDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDP 177
S D I++WD G +C + GH ++V ++TF+P SAS D+TI++W+L +
Sbjct: 316 SRDKTIRVWDVGVG-LCLFVLTGHDNWVRELTFHP-GGKYLVSASDDKTIRVWDLRNKRF 373
Query: 178 NFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
TL AHQ VD+ PY+I+GS D+T KVW+
Sbjct: 374 MKTLYAHQHFCTSVDFHK--KLPYVISGSVDNTVKVWE 409
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + ++ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ + + F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSIQDIPFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S++ D IK+W+
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
+ G+ C + F GH +V V N +D AS S D+T+++W + + + L H+
Sbjct: 221 VQTGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD T C+ TL GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V FH I++ ++D T+R+W R TLN V ++ + K++ +V G
Sbjct: 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HS 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ + D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSAARDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ QT CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEP 304
I + S I G+ K G+ P
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGP 309
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W Q+ K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTL------------- 111
+ + ++D +RV+ T + H + C++ P
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V F+ + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T+++W+ + TL+AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 147/308 (47%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP I+++ T+ +W++++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G+ C + F GH +V V N +D AS+S D+T+++W + + + L H+
Sbjct: 221 VATGY-CVKTFTGHREWVRMVRPN-QDGTLIASSSNDQTVRVWVVATKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD C+ TL GH
Sbjct: 279 VECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V V HP I++ ++D T+RIW R TL+ V ++ + K++ +V G
Sbjct: 339 NWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 24/279 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDF-ERTLKGHTDSVQDISFD-HT 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ T CV+T GH V V + + +I + S D TVR+W T + L V
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + S I G+ K G+ P + K I +
Sbjct: 280 ECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTI----------------KMW 323
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD 373
+V+ G + + L D + + + +P G+++V C D
Sbjct: 324 DVSIG----MCLMTLVGHDNWVRGVLVHPGGKYIVSCAD 358
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL-------- 111
+ + ++D +RV+ T + H + C++ HPT+
Sbjct: 242 PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSET 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V +P + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIG-MCLMTLVGHDNWVRGVLVHPGGKYIVSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T++IW+ + TL AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 20/308 (6%)
Query: 8 KRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA 67
K L+ V V HP ++++ T+ +W+Y++ ++ + V+ F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 68 RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
+ + + + DM I+++++ + ++ H + VA+ P +++S+S D IK+W+
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
G+ C + F GH +V V N +D AS S D+T+++W + S + L H+
Sbjct: 221 VATGY-CVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVASKECKAELREHEHV 278
Query: 188 VNCVDYF------------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
V C+ + +G P+L++GS D T K+WD C+ TL GH
Sbjct: 279 VECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHD 338
Query: 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIG 289
+ V + HP I++ ++D T+RIW R TL V ++ + K++ +V G
Sbjct: 339 NWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCMKTLGAHEHFVTSLDFHKNAPYVVTG 398
Query: 290 YDEGTIMV 297
+ T+ V
Sbjct: 399 SVDQTVKV 406
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 24/279 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP ++S+S+D IK+WD+E G + +GH+ V ++F+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFD-HT 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ T CV+T GH V V + + +I + S D TVR+W + + L V
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + S I G+ K G+ P + K I +
Sbjct: 280 ECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTI----------------KMW 323
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD 373
+V+ G + + L D + + + +P G+F++ C D
Sbjct: 324 DVSIG----MCLMTLVGHDNWVRGMLVHPGGKFILSCAD 358
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL-------- 111
+ + ++D +RV+ + + H + C++ HPT+
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSES 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V + +P + A D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIG-MCLMTLVGHDNWVRGMLVHPGGKFILSCAD-D 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T++IW+ + TL AH+ V +D+ PY++TGS D T KVW+
Sbjct: 360 KTLRIWDYKNKRCMKTLGAHEHFVTSLDFHKNA--PYVVTGSVDQTVKVWE 408
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 18 VKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
V V HP ++ S T+ +W+Y++ ++ + V+ F + + + +
Sbjct: 111 VTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA 170
Query: 78 DMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQI 137
DM I+++++ + ++ H + VA+ P +++S+S D IK+W+ G+ C +
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY-CVKT 229
Query: 138 FEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYF--- 194
F GH +V V N +D + AS S D+T+++W S + L H+ V C+ +
Sbjct: 230 FTGHREWVRMVRPN-QDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDT 288
Query: 195 ---------------TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
G P+L++GS D T K+WD T C+ TL GH + V V HP
Sbjct: 289 AHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHP 348
Query: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMV 297
I++ ++D T+RIW R TL V ++ +++ +V G + T+ V
Sbjct: 349 GGRFIVSCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDMHQTAPYVVTGSVDQTVKV 406
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 24/283 (8%)
Query: 95 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKD 154
H + V HP +++SS+D IK+WD+E G + +GH+ V ++F+ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDF-ERTLKGHTDSVQDISFD-QT 161
Query: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
AS S D TIK+W+ + T+ H V+ V GD ++++ S D T K+W
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMW 219
Query: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
+ T CV+T GH V V + + +I + S D TVR+W AT+ + L V
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVV 279
Query: 275 WAIGYMKSSRRIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKHNEIQTVNIKSVGADY 334
I + + I + K G+ P + K I +
Sbjct: 280 ECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTI----------------KMW 323
Query: 335 EVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377
+++ G + + L D + + + +P GRF+V C D + +
Sbjct: 324 DISTG----MCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTL 362
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAK 64
E R + V SV + P+ I+++ T+ +W + K+F VR +
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 65 FVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVA-----VHPTL-------- 111
+ + ++D +RV+ + + H + C+A HPT+
Sbjct: 242 PNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSES 301
Query: 112 -------PYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164
P++LS S D IK+WD G MC GH ++V V +P S + D
Sbjct: 302 KKNGKSGPFLLSGSRDKTIKMWDISTG-MCLMTLVGHDNWVRGVLVHPGG-RFIVSCADD 359
Query: 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
+T++IW+ + TL AH+ V +D PY++TGS D T KVW+
Sbjct: 360 KTLRIWDYKNKRCMKTLCAHEHFVTSLDMHQTA--PYVVTGSVDQTVKVWE 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 347,940,191
Number of Sequences: 539616
Number of extensions: 15042923
Number of successful extensions: 64486
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 692
Number of HSP's that attempted gapping in prelim test: 46330
Number of HSP's gapped (non-prelim): 9215
length of query: 914
length of database: 191,569,459
effective HSP length: 127
effective length of query: 787
effective length of database: 123,038,227
effective search space: 96831084649
effective search space used: 96831084649
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)