Query 002511
Match_columns 914
No_of_seqs 1065 out of 4682
Neff 10.5
Searched_HMMs 29240
Date Tue Mar 26 17:03:07 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002511.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1229-1233//hhsearch_pdb/002511hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkq_A Coatomer beta'-subunit; 1.0 1 1 823.8 94.5 791 3-797 1-813 (814)
2 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 437.1 56.5 549 9-588 609-1247(1249)
3 1nr0_A Actin interacting prote 1.0 1 1 424.6 57.8 539 12-589 15-610 (611)
4 2ymu_A WD-40 repeat protein; u 1.0 1 1 422.0 71.2 535 6-587 7-577 (577)
5 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 414.8 46.1 500 6-547 648-1245(1249)
6 3mkq_A Coatomer beta'-subunit; 1.0 1 1 413.6 62.0 690 48-816 4-803 (814)
7 1nr0_A Actin interacting prote 1.0 1 1 412.8 58.6 463 6-490 50-563 (611)
8 2ymu_A WD-40 repeat protein; u 1.0 1 1 393.6 65.2 457 5-490 47-535 (577)
9 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 373.2 61.7 467 11-490 13-657 (902)
10 1pgu_A Actin interacting prote 1.0 1 1 370.1 56.0 542 12-590 15-614 (615)
No 1
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=1.00 E-value=1 Score=823.85 Aligned_cols=791 Identities=47% Similarity=0.877 Sum_probs=719.8
Q ss_pred CCCHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEE
Q ss_conf 82034234245888889999968999799996699199995899934479640598867999965999999997897799
Q 002511 3 LRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIR 82 (914)
Q Consensus 3 ~~~~~~~~l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~ 82 (914)
|++++++.+.+|++.|++++|||++++|++++.+|.|++||+.++..+..+..|..+|++++|+|++++|++++.||.|+
T Consensus 1 m~l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp -CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEE
T ss_conf 99650004505898568999889999899994799899998999916778733899688999968999899992899499
Q ss_pred EEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEE
Q ss_conf 99889990669981589877999990899999999869929999879992489984058622799999069999999996
Q 002511 83 VYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASAS 162 (914)
Q Consensus 83 iwd~~t~~~~~~~~~h~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l~~~~ 162 (914)
+|++.+++.+..+..|.+.|++++|+|+++++++++.||.|++|++.++......+.+|...+.+++|+|.+++.+++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEE
T ss_conf 99899995879981689978999995899989999289989999899995487998379986889999769999999994
Q ss_pred CCCCEEEEECCCCCCCEEEECCC-CCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCC
Q ss_conf 89929999899999717980689-87469999667995899999869939999789994689842753366999990899
Q 002511 163 LDRTIKIWNLGSPDPNFTLDAHQ-KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPEL 241 (914)
Q Consensus 163 ~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~i~~~~~~ 241 (914)
.||+|++||+.++.....+..+. ..+.+++|+|.+++.++++++.+|.|++||+.++..+..+.+|...+.+++|+|++
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCC
T ss_conf 88949999899996106983588897799999977999899999389979999999991889984788887899985999
Q ss_pred CEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCC--EEEEEECCCEEEEECCCCCCEEEECCCCCEEEEEE
Q ss_conf 9899998799099996998615777503884489999954999--79999628908998178864067708993999960
Q 002511 242 PIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSR--RIVIGYDEGTIMVKIGREEPVASMDNSGKIIWAKH 319 (914)
Q Consensus 242 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~--~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 319 (914)
+++++++.||.|++||..+++....+..+...+++++|+|++. .++++.+++.+.++.....+...+++++..++...
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 320 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGG 320 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCCCEEEECC
T ss_conf 99999908996999989999477784068886799999249995099999079879997679974167779987899776
Q ss_pred CCE-----EEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEE
Q ss_conf 717-----999954326510105896210023433975558805897889979999939909999820333346673569
Q 002511 320 NEI-----QTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALE 394 (914)
Q Consensus 320 ~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~~g~~~i~~~~~~~~~~~~~~~~ 394 (914)
... ....+. ..+....+.........+..+...+..++|+|+|+++++++++.+.+|+...++....+.+.+
T Consensus 321 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~ 397 (814)
T 3mkq_A 321 KNAAASDIFTAVIR---GNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQD 397 (814)
T ss_dssp TTSCTTCEEEEECC---SCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSE
T ss_pred CCCCCEEEEEEECC---CCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEE
T ss_conf 36641124665304---655555676201465117887657740689999998999429889999874544567995479
Q ss_pred EEEECCCCEEEEEC-CCEEEEECCCCCCC--EEEECCCCCCEEECCCEEEEEECCEEEEEECCCCCEEEEEECCEEEEEE
Q ss_conf 99921885899836-98299832575220--0120576310364384999974891999863678178998711208999
Q 002511 395 FVWSSDGEYAVRES-SSKIKIFSKNFQEK--RSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYW 471 (914)
Q Consensus 395 ~~~s~~g~~l~~~~-~~~i~i~~~~~~~~--~~~~~~~s~~~i~~g~~La~~~~~~i~i~d~~~~~~i~~~~~~i~~i~~ 471 (914)
++|+|+++++++.+ ++.+++|+ .+.++ ......|+|++++++.++.....+.|++||+.+++++..+......+.|
T Consensus 398 ~~~spdg~~la~~~~~g~v~l~~-~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~ 476 (814)
T 3mkq_A 398 FVWGPDSNSYALIDETGQIKYYK-NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIW 476 (814)
T ss_dssp EEECTTSSCEEEECTTCCEEEEE-TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEEEEEE
T ss_pred EEEECCCCEEEEEECCCCEEEEE-CCCCCCCEEECCCCCCCCEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 99947998599996898399997-77775243973786755236546999966998999998769599997358887999
Q ss_pred CCCCCEEEEE------ECCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCEEEEECCCCEEE
Q ss_conf 1799999999------4982999993188899766179998744533423575554567786689447899972697499
Q 002511 472 ADSGDLVAIA------SDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNSSWRLN 545 (914)
Q Consensus 472 s~dg~~la~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~i~~~~w~~~~~i~~~~~~~l~ 545 (914)
+|||++++++ +++..+++|++.+.....++.+...+++|.+..|..+.++...+.+++|++++|+|.+..+++.
T Consensus 477 s~dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~w~~~~~i~~t~~~~~~ 556 (814)
T 3mkq_A 477 SDNGELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLN 556 (814)
T ss_dssp CTTSSEEEEEECCCSSCSCSEEEEEECHHHHHHHHHHTCCBTTTBCTTTEEEEEEECSCCSEEEEETTEEEEECTTSEEE
T ss_pred CCCCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCEEEEEEEECCEEEEECCCCEEE
T ss_conf 69999999998676667742899995468866666416876212502221364576427876598088899976887089
Q ss_pred EEECCEEEEEEECCCCEEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCHHHHHH-HCCCCC-CCHHHHHH
Q ss_conf 9988977499830342689989630889999936882689983612676889998069888962-569999-40178999
Q 002511 546 YCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANE-ILPSIP-KEHHNSVA 623 (914)
Q Consensus 546 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~-~l~~i~-~~~~~~~~ 623 (914)
|+.+++...+.+++.+.+++++.+++++++++|+++.+..|.++...++|+.++.+++++.|.. +++.|+ ...+..++
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~i~~~~~~~~~~ 636 (814)
T 3mkq_A 557 YFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIA 636 (814)
T ss_dssp EEETTEEEEEEECSSCCEEEEEEGGGTEEEEECTTCCEEEEECCHHHHHHHHHHHTTCHHHHHHHTGGGCCCHHHHHHHH
T ss_pred EEECCEEEEEEECCCCEEEEEEEECCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99698668999989667999998329999999288887999989099999699870799999988874288467899999
Q ss_pred HHHHHCCCHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH
Q ss_conf 99993998365543145866302200013998999999998099679999999999749911589999881895514778
Q 002511 624 RFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLL 703 (914)
Q Consensus 624 ~~~~~~~~~~~a~~~~~~~~~~f~~~l~l~~~~~A~~~a~~~~~~~~w~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l 703 (914)
+|++++++++.|++++++++++|++++++|+|++|+++|+.++++.+|++||++|++.++++.|++||.+++|++++.++
T Consensus 637 ~~l~~~~~~~~a~~~~~~~~~~f~~~l~~~~~~~A~~~~~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l 716 (814)
T 3mkq_A 637 RFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLL 716 (814)
T ss_dssp HHHHHTTCHHHHHHHCCCHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHCCCHHHHEECCCCCCHHEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
T ss_conf 99986898689605278931425021450999999999986176768999999999849989999999870271355899
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCH--HHHHHHHHHHHHHHC
Q ss_conf 772299888999999999929923988999972998899999998799258899888509970--789999999854200
Q 002511 704 YSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSK--VSEIVAIWRKDLQKV 781 (914)
Q Consensus 704 ~~~~g~~~~~~~~~~~a~~~~~~~~a~~~~~~~g~~~~a~~l~~~~~~~~~A~~~a~~~~~~~--~~~~~~~~~~~L~~~ 781 (914)
|...++.+.+.++++++...|+++.|+.+|+++|++++|+++|++++||++|+++|++|.|++ ++.++++|+++|...
T Consensus 717 ~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~~L~~~ 796 (814)
T 3mkq_A 717 HSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLILN 796 (814)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 87729999999999999985866799999988099999999999869947899999870997578899999999998761
Q ss_pred CH-HHHHHCCCCCCCCC
Q ss_conf 92-43421189934777
Q 002511 782 NP-KAAESLADPEEYSN 797 (914)
Q Consensus 782 ~~-~~a~~l~~p~~~~~ 797 (914)
++ ++|++|++|+++|.
T Consensus 797 ~~~~~a~~l~~~~~~~~ 813 (814)
T 3mkq_A 797 GKNTVSERVCGAEGLPG 813 (814)
T ss_dssp TCHHHHTTBCCGGGCC-
T ss_pred CCHHHHHHHCCCCCCCC
T ss_conf 64668986379112799
No 2
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=437.14 Aligned_cols=549 Identities=13% Similarity=0.193 Sum_probs=409.9
Q ss_pred HHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEECCC
Q ss_conf 34245888889999968999799996699199995899934479640598867999965999999997897799998899
Q 002511 9 RKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNT 88 (914)
Q Consensus 9 ~~l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~iwd~~t 88 (914)
..+.+|.+.|++++|+|+++++++|+.+|.|++||..+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCC
T ss_conf 78716666489999879999899994889499999899978887606777789999926999899981899599987799
Q ss_pred CEEEEEEECCCCCEEEEEEEC--CCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCC
Q ss_conf 906699815898779999908--999999998699299998799924899840586227999990699999999968992
Q 002511 89 MDKVKVFEAHTDYIRCVAVHP--TLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRT 166 (914)
Q Consensus 89 ~~~~~~~~~h~~~i~~i~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l~~~~~dg~ 166 (914)
++.+..+..|...|.++.|+| ++..+++++.|+.|++||+.++ .+...+.+|...|.+++|+| +++.+++++.||+
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-ECRNTMFGHTNSVNHCRFSP-DDELLASCSADGT 766 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-SEEEEECCCSSCEEEEEECS-STTEEEEEESSSE
T ss_pred CCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCC-CHHHEECCCCCCEEEEEEEC-CCCEEEEEECCCE
T ss_conf 936899958997379999840899659999808970999989996-34220127779788999925-9998999978985
Q ss_pred EEEEECCCCCCCEEEEC-------------CCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-CCCCCE
Q ss_conf 99998999997179806-------------8987469999667995899999869939999789994689842-753366
Q 002511 167 IKIWNLGSPDPNFTLDA-------------HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNV 232 (914)
Q Consensus 167 i~iwd~~~~~~~~~~~~-------------~~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~i 232 (914)
|++||+.++.....+.. ....+.+++|+|++. .+++++ ++.+.+|+..++..+..+. +|...+
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~--~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD--KIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS--EEEEEE-TTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred EEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC--EEEEEC-CCCEEEEEECCCCCEEEECCCCCCCE
T ss_conf 999968888655302023210246776445650179999978998--899975-89599999568972357747877760
Q ss_pred EEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCC---------
Q ss_conf 99999089998999987990999969986157775038844899999549997999962890899817886---------
Q 002511 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE--------- 303 (914)
Q Consensus 233 ~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~dg~i~i~~~~~~--------- 303 (914)
.+++|+|++.++++++.+|.|++|+..++.....+..|...+.+++|+|+++.+++++.||.+++|.....
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~ 923 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLK 923 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEE
T ss_pred EEEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCC
T ss_conf 79998278888999947986999986789565322787665689999899998999958972898874665201021133
Q ss_pred -----------------------------------------CEEEECCCCCEEEEEECCEEEEEEEECCCCEECCCCCEE
Q ss_conf -----------------------------------------406770899399996071799995432651010589621
Q 002511 304 -----------------------------------------PVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERL 342 (914)
Q Consensus 304 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 342 (914)
...++.+++..+...... +....|+..+++..
T Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~-------g~i~i~d~~~~~~~ 996 (1249)
T 3sfz_A 924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED-------GAIKIIELPNNRVF 996 (1249)
T ss_dssp EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT-------SCCEEEETTTTSCE
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCEEEEECCC-------CCEEEEECCCCCEE
T ss_conf 10368975998689981377624898447650897256727899995899779998699-------98899975787234
Q ss_pred EEEEEECCCCCCCCCEEEECCCCCEEEEEC-CCCEEEEEEECCC----CCCCCCEEEEEEECCCCEEEEECCCEEEEECC
Q ss_conf 002343397555880589788997999993-9909999820333----34667356999921885899836982998325
Q 002511 343 PLAVKELGTCDLYPQSLKHNPNGRFVVVCG-DGEYIIYTALAWR----NRSFGSALEFVWSSDGEYAVRESSSKIKIFSK 417 (914)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~s~dg~~la~~~-~g~~~i~~~~~~~----~~~~~~~~~~~~s~~g~~l~~~~~~~i~i~~~ 417 (914)
..+..+...+.+++|+|+|+++++++ ++.+.+|+..... ..+...+.++.|++++.+++...++.|++|+.
T Consensus 997 ----~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~ 1072 (1249)
T 3sfz_A 997 ----SSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNV 1072 (1249)
T ss_dssp ----EECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEET
T ss_pred ----EECCCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEC
T ss_conf ----4303677716899998999989998699879999879996689852787389999908995899978896899888
Q ss_pred CCCCCE-EE--------ECCCCCCEEECCCEEEEEECC-EEEEEECCCCCEEEEEE---CCEEEEEECCCCCEEEEEECC
Q ss_conf 752200-12--------057631036438499997489-19998636781789987---112089991799999999498
Q 002511 418 NFQEKR-SV--------RPTFSAERIYGGTLLAMCSND-FICFYDWAECRLIRRID---VTVKNLYWADSGDLVAIASDT 484 (914)
Q Consensus 418 ~~~~~~-~~--------~~~~s~~~i~~g~~La~~~~~-~i~i~d~~~~~~i~~~~---~~i~~i~~s~dg~~la~~~~~ 484 (914)
...... .+ ...|+|+ +.+|++++.+ +|++||+.+++.+..+. ..|.++.|+|+|+++++++.+
T Consensus 1073 ~~~~~~~~~~~~~~~v~~~~~s~d----~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A 1073 ITGRIERDFTCHQGTVLSCAISSD----ATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp TTTCCCEEEECCSSCCCCEEECSS----SSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCCEEEEECCCCCCEEEEEECCC----CCEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 988655887466884899999899----9989998499948998789850012550687767999997999989998289
Q ss_pred EEE-EEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEC--CEEEEECCCCEEEEEEC--CE-EEEEEEC
Q ss_conf 299-999318889976617999874453342357555456778668944--78999726974999988--97-7499830
Q 002511 485 SFY-ILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVG--DCFIYNNSSWRLNYCVG--GE-VTTMFHL 558 (914)
Q Consensus 485 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~i~~~~w~~--~~~i~~~~~~~l~~~~~--~~-~~~i~~~ 558 (914)
+.+ +|+.. .+.....................+.+.+|.. ..++.. . +.+..+.. +. ...+...
T Consensus 1149 g~i~vwd~~---------~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~-~-g~v~vwd~~~g~~~~~~~~~ 1217 (1249)
T 3sfz_A 1149 GEIRIWNVS---------DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSA-G-GYLKWWNVATGDSSQTFYTN 1217 (1249)
T ss_dssp SCCCEEESS---------SSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEE-S-SSEEEBCSSSCBCCCCCCCS
T ss_pred CEEEEEECC---------CCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEC-C-CEEEEEECCCCCEEEEEECC
T ss_conf 979999889---------994578851444442102567428999997899989977-9-85999898889500464004
Q ss_pred CCCEEEEEEEECCCEEEEEECCCCEEEEEE
Q ss_conf 342689989630889999936882689983
Q 002511 559 DRPMYLLGYLASQSRVYLIDKEFNVMGYTL 588 (914)
Q Consensus 559 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~l 588 (914)
..++.-+.+.+++..++..+.++.++.|.+
T Consensus 1218 ~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1218 GTNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp SCCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred CCCCCEEEECCCCCEEEEECCCCEEEEEEE
T ss_conf 775327999789877999668817999764
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=424.64 Aligned_cols=539 Identities=14% Similarity=0.155 Sum_probs=339.4
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCE-
Q ss_conf 4588888999996899979999669919999589993447964059886799996599999999789779999889990-
Q 002511 12 AQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMD- 90 (914)
Q Consensus 12 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~iwd~~t~~- 90 (914)
..+.+.+.+++|+|+|++|++++ ++.|++|++.++.....+.+|...|++++|+|+|++|++|+.|+.|++||+.+++
T Consensus 15 ~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 93 (611)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred CCCCCCEEEEEECCCCCEEEECC-CCEEEEECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCC
T ss_conf 74068236976679999799679-99799945787242737658998659999999996899994899789948989841
Q ss_pred -EEEEEECCCCCEEEEEEECCCCEEEEEECC----CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCC
Q ss_conf -669981589877999990899999999869----929999879992489984058622799999069999999996899
Q 002511 91 -KVKVFEAHTDYIRCVAVHPTLPYVLSSSDD----MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165 (914)
Q Consensus 91 -~~~~~~~h~~~i~~i~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l~~~~~dg 165 (914)
....+..|.+.|.+++|+|++++|++++.+ +.|++||. + .....+.+|...|.+++|+|.+...+++++.|+
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~ 170 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--G-TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN 170 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--C-CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEC--C-CCCCEECCCCCCCEEEEECCCCCEEEEEEECCC
T ss_conf 5667622557844899989999979999899773669999638--9-976325478898369998899982999992898
Q ss_pred CEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-------CCCCCEEEEEEE
Q ss_conf 2999989999971798068987469999667995899999869939999789994689842-------753366999990
Q 002511 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE-------GHTHNVSAVCFH 238 (914)
Q Consensus 166 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~i~~i~~~ 238 (914)
+|++||....+....+.+|...|.+++|+|++. ++++++.|+.|++||..+++++..+. +|...|.+++|+
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~--~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s 248 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS--LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 248 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred EEEEEECCCCEEEEEECCCCCCEEEEEECCCCC--EEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEC
T ss_conf 099997999757665200257169999979999--899998999199988999828665136643235667878999997
Q ss_pred CCCCEEEEEECCCEEEEEECCCCEEEEEEECC---CCCEEEEEEECCCCEEEEEECCCEEEEECCCCC-----------C
Q ss_conf 89998999987990999969986157775038---844899999549997999962890899817886-----------4
Q 002511 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYG---LERVWAIGYMKSSRRIVIGYDEGTIMVKIGREE-----------P 304 (914)
Q Consensus 239 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~v~~i~~~~~~~~l~~~~~dg~i~i~~~~~~-----------~ 304 (914)
|++++|++++.|+.|++||+.+++...++..+ ......+.| ++..+++++.+|.+++|..... .
T Consensus 249 pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~ 326 (611)
T 1nr0_A 249 PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKA 326 (611)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCCCCEEECCCCCC
T ss_conf 99999999908980999968887013440478876640689997--3887999958996899968899744698378888
Q ss_pred E--EEECCCCCEEEEEECCEEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCEEEEEEE
Q ss_conf 0--67708993999960717999954326510105896210023433975558805897889979999939909999820
Q 002511 305 V--ASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTAL 382 (914)
Q Consensus 305 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~~g~~~i~~~~ 382 (914)
+ .++.+++..++....+-.+ ..|+..+++..... ...+...+..++|++++.++..+.++.+.+|+..
T Consensus 327 v~~l~~spdg~~l~s~s~D~~v-------~~Wd~~~~~~~~~~---~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 327 ITALSSSADGKTLFSADAEGHI-------NSWDISTGISNRVF---PDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCE-------EEEETTTCCEEECS---SCSCSSCEEEEEECTTSCEEEEETTTEEEEECSS
T ss_pred EEEEEEECCCCEEEEEECCCCE-------EEEECCCCCEEEEC---CCCCCCEEEEEEECCCCCEEEEECCCCEEEEECC
T ss_conf 8999991899989999589849-------99978879256321---6677650789998789969999848966895468
Q ss_pred CCCC--------CCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCCEE-------EECCCCCCEEECCCEEEEEECC-
Q ss_conf 3333--------46673569999218858998369829983257522001-------2057631036438499997489-
Q 002511 383 AWRN--------RSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQEKRS-------VRPTFSAERIYGGTLLAMCSND- 446 (914)
Q Consensus 383 ~~~~--------~~~~~~~~~~~s~~g~~l~~~~~~~i~i~~~~~~~~~~-------~~~~~s~~~i~~g~~La~~~~~- 446 (914)
.... ...+....++++++++.++...++.+++|+.. . ... ...+|+|+ |++|++++.|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~-~-~~~~~~~~~v~~va~spd----g~~lasgs~D~ 470 (611)
T 1nr0_A 397 GSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG-K-LTEVPISYNSSCVALSND----KQFVAVGGQDS 470 (611)
T ss_dssp SSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT-E-EEEEECSSCEEEEEECTT----SCEEEEEETTS
T ss_pred CCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCEEEEEECC-C-EEEEECCCCCEEEEEECC----CCEEEEECCCC
T ss_conf 85435652120014899707998079969999967639998489-4-346406889549999289----98999968997
Q ss_pred EEEEEECCCCCEE--EE--EECCEEEEEECCCCCEEEEEECCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 1999863678178--99--8711208999179999999949829999931888997661799987445334235755545
Q 002511 447 FICFYDWAECRLI--RR--IDVTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETN 522 (914)
Q Consensus 447 ~i~i~d~~~~~~i--~~--~~~~i~~i~~s~dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 522 (914)
+|++||+.++.+. .. +...|.+++|+|||++|++++.++.+.+|.-.. .+............
T Consensus 471 ~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~--------------~~~~~~~~~~~~H~ 536 (611)
T 1nr0_A 471 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN--------------NFELAHTNSWTFHT 536 (611)
T ss_dssp EEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG--------------TTEESCCCCCCCCS
T ss_pred EEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCC--------------CCCEEEEEEEEECC
T ss_conf 3999994599222410157788607999989999899994899899988577--------------87223210264046
Q ss_pred EEEEEEEEEC--CEEEEECCCCEEEEEECCE---EE-EE-EEC-CCCEEEEEEEECCCEEEEEECCCCEEEEEEC
Q ss_conf 6778668944--7899972697499998897---74-99-830-3426899896308899999368826899836
Q 002511 523 ERVRTGLWVG--DCFIYNNSSWRLNYCVGGE---VT-TM-FHL-DRPMYLLGYLASQSRVYLIDKEFNVMGYTLL 589 (914)
Q Consensus 523 ~~i~~~~w~~--~~~i~~~~~~~l~~~~~~~---~~-~i-~~~-~~~~~~~~~~~~~~~l~~~d~~~~~~~~~l~ 589 (914)
..|.+..|.. ..++.....+.+..+.... .. .+ ... ...+.-+.+.+++. ++....++.+..|++.
T Consensus 537 ~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 537 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCCE-EEEECCCCCEEEEECC
T ss_conf 6425899899899799997997299997887555632644467656711899858997-9995288778998444
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=422.04 Aligned_cols=535 Identities=22% Similarity=0.334 Sum_probs=385.2
Q ss_pred HHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEE
Q ss_conf 34234245888889999968999799996699199995899934479640598867999965999999997897799998
Q 002511 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYN 85 (914)
Q Consensus 6 ~~~~~l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~iwd 85 (914)
+.+++|.||++.|++++|||||++||+++.|+.|+||| .+++.++++.+|..+|.+++|+|++++|++++.|+.|++||
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd-~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC-TTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEE-CCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 89439878998579999989989999993899899997-99978999968989989999989999999996989799998
Q ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCC
Q ss_conf 89990669981589877999990899999999869929999879992489984058622799999069999999996899
Q 002511 86 YNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165 (914)
Q Consensus 86 ~~t~~~~~~~~~h~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l~~~~~dg 165 (914)
. +++.+..+.+|...|.+++|+|+++++++++.|+.+++|+.... .......+...+.++.++| ++..++.++.++
T Consensus 86 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~ 161 (577)
T 2ymu_A 86 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHSSSVWGVAFSP-DGQTIASASDDK 161 (577)
T ss_dssp T-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC--EEEEECCCSSCEEEEEECT-TSSCEEEEETTS
T ss_pred C-CCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCC--EEEECCCCCCCEEEEEEEC-CCCCCEECCCCC
T ss_conf 9-99789999789998899999899998999807983352023552--0011047777435554203-776320025553
Q ss_pred CEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEE
Q ss_conf 29999899999717980689874699996679958999998699399997899946898427533669999908999899
Q 002511 166 TIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245 (914)
Q Consensus 166 ~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~ 245 (914)
.+.+|+... ........+...+.++.++|++. ++++++.|+.|++|+. +++.+..+.+|...|.+++|+|++.+++
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 237 (577)
T 2ymu_A 162 TVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 237 (577)
T ss_dssp EEEEECTTS-CEEEEEECCSSCEEEEEECTTSS--CEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred CEECCCCCE-EEEEECCCCCCCEEEEEECCCCC--EEEEECCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 100000000-00000268776356654169977--8999859998999949-9968999946889889999979999999
Q ss_pred EEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCEE------------EECCCCC
Q ss_conf 9987990999969986157775038844899999549997999962890899817886406------------7708993
Q 002511 246 TGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVA------------SMDNSGK 313 (914)
Q Consensus 246 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~dg~i~i~~~~~~~~~------------~~~~~~~ 313 (914)
+++.|+.|++|+. +++.+..+..+...+.+++|+|+++.+++++.++.+++|........ .+.+++.
T Consensus 238 ~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~ 316 (577)
T 2ymu_A 238 SASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ 316 (577)
T ss_dssp EEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSS
T ss_pred EEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCC
T ss_conf 9918998999959-997999980688987999996899999999599979999489958999706889769999999999
Q ss_pred EEEEEE--CCEEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEC-CCCEEEEEEECCC----C
Q ss_conf 999960--71799995432651010589621002343397555880589788997999993-9909999820333----3
Q 002511 314 IIWAKH--NEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG-DGEYIIYTALAWR----N 386 (914)
Q Consensus 314 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~-~g~~~i~~~~~~~----~ 386 (914)
.+.... +.++. |+..... + ..+..+...+.+++|+|+|+++++++ ++.+.+|+..... .
T Consensus 317 ~l~t~~~d~~i~~---------w~~~~~~-~----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~ 382 (577)
T 2ymu_A 317 TIASASDDKTVKL---------WNRNGQH-L----QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 382 (577)
T ss_dssp EEEEEETTSCEEE---------EETTSCE-E----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE
T ss_pred EEEEEECCCEEEE---------EECCCCE-E----EEEECCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEC
T ss_conf 9999969995999---------9699972-5----787478897799999899999999969998999908997899852
Q ss_pred CCCCCEEEEEEECCCCEEEEEC-CCEEEEECCCCCCCEEEE--------CCCCCCEEECCCEEEEEECC-EEEEEECCCC
Q ss_conf 4667356999921885899836-982998325752200120--------57631036438499997489-1999863678
Q 002511 387 RSFGSALEFVWSSDGEYAVRES-SSKIKIFSKNFQEKRSVR--------PTFSAERIYGGTLLAMCSND-FICFYDWAEC 456 (914)
Q Consensus 387 ~~~~~~~~~~~s~~g~~l~~~~-~~~i~i~~~~~~~~~~~~--------~~~s~~~i~~g~~La~~~~~-~i~i~d~~~~ 456 (914)
.+...+.+++|+|+++++++++ ++.|++|+.+.+....+. ..|+|+ +.+|++++.+ .|++||. ++
T Consensus 383 ~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d----~~~l~~~~~d~~v~~w~~-~~ 457 (577)
T 2ymu_A 383 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD----DQTIASASDDKTVKLWNR-NG 457 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTT----SSEEEEEETTSEEEEEET-TS
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCC----CCEEEEECCCCEEEEEEC-CC
T ss_conf 7889748999989999999994999899996999789896288997579999899----999999939998999979-99
Q ss_pred CEEEEEE---CCEEEEEECCCCCEEEEEECCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEC-
Q ss_conf 1789987---112089991799999999498299999318889976617999874453342357555456778668944-
Q 002511 457 RLIRRID---VTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVG- 532 (914)
Q Consensus 457 ~~i~~~~---~~i~~i~~s~dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~i~~~~w~~- 532 (914)
+.+..+. ..|.+++|+|++++|++++.++.+.+|-. .+. ....+......|.+.+|..
T Consensus 458 ~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~----------------~~~--~~~~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 458 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR----------------NGQ--LLQTLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET----------------TSC--EEEEEECCSSCEEEEEECTT
T ss_pred CEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEECC----------------CCC--EEEEEECCCCCEEEEEECCC
T ss_conf 889997278997789999699999999919897999939----------------997--89998679999899999189
Q ss_pred -CEEEEECCCCEEEEEE--CCEEEEEEECCCCEEEEEEEECCCEEEEEECCCCEEEEE
Q ss_conf -7899972697499998--897749983034268998963088999993688268998
Q 002511 533 -DCFIYNNSSWRLNYCV--GGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYT 587 (914)
Q Consensus 533 -~~~i~~~~~~~l~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 587 (914)
.+++.....+.+..+. +.....+..+..++.-+.+.|++..++....++.++.|+
T Consensus 520 g~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 9999999896999999699978989718888878999968999999990899999969
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=414.79 Aligned_cols=500 Identities=15% Similarity=0.233 Sum_probs=381.1
Q ss_pred HHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEEC--CCCEEEEEECCCEEEE
Q ss_conf 34234245888889999968999799996699199995899934479640598867999965--9999999978977999
Q 002511 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVA--RKQWVVAGADDMFIRV 83 (914)
Q Consensus 6 ~~~~~l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~--~~~~l~~g~~dg~i~i 83 (914)
+....+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+| ++..+++|+.|+.|++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred CEEEEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEE
T ss_conf 78887606777789999926999899981899599987799936899958997379999840899659999808970999
Q ss_pred EECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEEEC-------------CCCCEEEEEE
Q ss_conf 988999066998158987799999089999999986992999987999248998405-------------8622799999
Q 002511 84 YNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEG-------------HSHYVMQVTF 150 (914)
Q Consensus 84 wd~~t~~~~~~~~~h~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~~i~~i~~ 150 (914)
||+.+++....+.+|.+.|++++|+|+++++++++.||.|++||+.++. ....+.. ....+.+++|
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN-ERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE-EEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EECCCCCHHHEECCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCC-CCCEECCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 9899963422012777978899992599989999789859999688886-553020232102467764456501799999
Q ss_pred CCCCCCEEEEEECCCCEEEEECCCCCCCEEEE-CCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCC
Q ss_conf 06999999999689929999899999717980-68987469999667995899999869939999789994689842753
Q 002511 151 NPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229 (914)
Q Consensus 151 ~p~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 229 (914)
+| ++..+++++ ++.+.+|++.++.....+. +|...+.++.|+|++. ++++++.++.|++|++.++..+..+.+|.
T Consensus 807 s~-dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 882 (1249)
T 3sfz_A 807 SA-DGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH--LAVIALSQYCVELWNIDSRLKVADCRGHL 882 (1249)
T ss_dssp CT-TSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT--EEEEECSSSCEEEEETTTTEEEEEECCCS
T ss_pred CC-CCCEEEEEC-CCCEEEEEECCCCCEEEECCCCCCCEEEEEECCCCC--EEEEEECCCEEEEEECCCCCEEEECCCCC
T ss_conf 78-998899975-895999995689723577478777607999827888--89999479869999867895653227876
Q ss_pred CCEEEEEEECCCCEEEEEECCCEEEEEECCCCEE-----------------------------EE--------EEECCCC
Q ss_conf 3669999908999899998799099996998615-----------------------------77--------7503884
Q 002511 230 HNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL-----------------------------EN--------TLNYGLE 272 (914)
Q Consensus 230 ~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----------------------------~~--------~~~~~~~ 272 (914)
..|.+++|+|+++.+++++.||.|++|+..+... .. ....+..
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEA 962 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCS
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCC
T ss_conf 65689999899998999958972898874665201021133103689759986899813776248984476508972567
Q ss_pred CEEEEEEECCCCEEEEEECCCEEEEECCCCCC-------------EEEECCCCCEEEEEE--CCEEEEEEEECCCCEECC
Q ss_conf 48999995499979999628908998178864-------------067708993999960--717999954326510105
Q 002511 273 RVWAIGYMKSSRRIVIGYDEGTIMVKIGREEP-------------VASMDNSGKIIWAKH--NEIQTVNIKSVGADYEVT 337 (914)
Q Consensus 273 ~v~~i~~~~~~~~l~~~~~dg~i~i~~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 337 (914)
.+.+++|+|+++++++|+.+|.+.+|...... ...+.+++..+.... +.+.. |+..
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~v---------wd~~ 1033 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQV---------WNWQ 1033 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEE---------EETT
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEE---------EECC
T ss_conf 2789999589977999869998899975787234430367771689999899998999869987999---------9879
Q ss_pred CCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCC-----CCCCCEEEEEEECCCCEEEEEC-CCE
Q ss_conf 8962100234339755588058978899799999399099998203333-----4667356999921885899836-982
Q 002511 338 DGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYIIYTALAWRN-----RSFGSALEFVWSSDGEYAVRES-SSK 411 (914)
Q Consensus 338 ~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~~g~~~i~~~~~~~~-----~~~~~~~~~~~s~~g~~l~~~~-~~~ 411 (914)
+++... ...+...+..+.++|++.+++.+.++.+.+|+....+. .+.+.+.+++|+|+++++++++ ++.
T Consensus 1034 ~~~~~~-----~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~ 1108 (1249)
T 3sfz_A 1034 TGDYVF-----LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKT 1108 (1249)
T ss_dssp TTEEEC-----CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSC
T ss_pred CCCEEE-----EECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 996689-----852787389999908995899978896899888988655887466884899999899998999849994
Q ss_pred EEEECCCCCC-------CE--EEECCCCCCEEECCCEEEEEECC-EEEEEECCCCCEEEEE------------ECCEEEE
Q ss_conf 9983257522-------00--12057631036438499997489-1999863678178998------------7112089
Q 002511 412 IKIFSKNFQE-------KR--SVRPTFSAERIYGGTLLAMCSND-FICFYDWAECRLIRRI------------DVTVKNL 469 (914)
Q Consensus 412 i~i~~~~~~~-------~~--~~~~~~s~~~i~~g~~La~~~~~-~i~i~d~~~~~~i~~~------------~~~i~~i 469 (914)
|++|+..... +. .....|+|+ |.+|++++.+ .|++||+.+++.+..+ ...|..+
T Consensus 1109 v~iwd~~~~~~~~~l~~h~~~v~~~~~s~d----g~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 1184 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLHELKGHNGCVRCSAFSLD----GILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDV 1184 (1249)
T ss_dssp CCEECSSSSSCSBCCCCCSSCEEEEEECSS----SSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEE
T ss_pred EEEEECCCCCEEEEECCCCCCEEEEEECCC----CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf 899878985001255068776799999799----9989998289979999889994578851444442102567428999
Q ss_pred EECCCCCEEEEEECCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEC--CEEEEECCCCEEEEE
Q ss_conf 991799999999498299999318889976617999874453342357555456778668944--789997269749999
Q 002511 470 YWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVG--DCFIYNNSSWRLNYC 547 (914)
Q Consensus 470 ~~s~dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~i~~~~w~~--~~~i~~~~~~~l~~~ 547 (914)
.|++||+++++++ ..+.+|+... + .....+.. ....+.+..|.. ..++.....+.+..+
T Consensus 1185 ~fs~dg~~l~s~~-g~v~vwd~~~---------g------~~~~~~~~---~~~~i~~~~~s~dg~~l~~~~~dg~v~vw 1245 (1249)
T 3sfz_A 1185 CFSPDSKTLVSAG-GYLKWWNVAT---------G------DSSQTFYT---NGTNLKKIHVSPDFRTYVTVDNLGILYIL 1245 (1249)
T ss_dssp EECTTSSCEEEES-SSEEEBCSSS---------C------BCCCCCCC---SSCCCCCCEECSSSCCEEEECTTCCEEEE
T ss_pred EECCCCCEEEECC-CEEEEEECCC---------C------CEEEEEEC---CCCCCCEEEECCCCCEEEEECCCCEEEEE
T ss_conf 9978999899779-8599989888---------9------50046400---47753279997898779996688179997
No 6
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=1.00 E-value=1 Score=413.63 Aligned_cols=690 Identities=17% Similarity=0.222 Sum_probs=404.6
Q ss_pred CEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEE
Q ss_conf 34479640598867999965999999997897799998899906699815898779999908999999998699299998
Q 002511 48 TMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127 (914)
Q Consensus 48 ~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~iwd~~t~~~~~~~~~h~~~i~~i~~~~~~~~l~~~~~dg~i~iwd 127 (914)
...+.+.+|...|.+++|+|++++|++++.+|.|++|++.+++.+..+..|...|++++|+|++++|++++.||.|++|+
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred CCCEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEE
T ss_conf 50004505898568999889999899994799899998999916778733899688999968999899992899499998
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCC-CCCEEEECCCCCEEEEEEEE-CCCCCEEEEE
Q ss_conf 799924899840586227999990699999999968992999989999-97179806898746999966-7995899999
Q 002511 128 WEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSP-DPNFTLDAHQKGVNCVDYFT-GGDKPYLITG 205 (914)
Q Consensus 128 ~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~-~~~~~~l~~~ 205 (914)
+.++ .....+.+|...|.+++|+| ++..+++++.||.|++|++.++ .....+..|...+.+++|+| ++. +++++
T Consensus 84 ~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--~l~~~ 159 (814)
T 3mkq_A 84 YNTG-EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS--TFASG 159 (814)
T ss_dssp TTTC-CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE--EEEEE
T ss_pred CCCC-CEEEEEECCCCCEEEEEEEC-CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCC--EEEEE
T ss_conf 9999-58799816899789999958-99989999289989999899995487998379986889999769999--99999
Q ss_pred ECCCEEEEEECCCCCEEEEECCCC-CCEEEEEEEC--CCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECC
Q ss_conf 869939999789994689842753-3669999908--9998999987990999969986157775038844899999549
Q 002511 206 SDDHTAKVWDYQTKSCVQTLEGHT-HNVSAVCFHP--ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKS 282 (914)
Q Consensus 206 ~~dg~i~iwd~~~~~~~~~~~~~~-~~i~~i~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~ 282 (914)
+.||.|++||+.++.....+..+. ..+.+++|+| +++++++++.||.|++||..+++....+..|...+.+++|+|+
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred ECCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCC
T ss_conf 48894999989999610698358889779999997799989999938997999999999188998478888789998599
Q ss_pred CCEEEEEECCCEEEEECCCCCCEE-EE------------CCCCC---EEEEEECCEEEEEEEECCCCEECCCCCEEEEEE
Q ss_conf 997999962890899817886406-77------------08993---999960717999954326510105896210023
Q 002511 283 SRRIVIGYDEGTIMVKIGREEPVA-SM------------DNSGK---IIWAKHNEIQTVNIKSVGADYEVTDGERLPLAV 346 (914)
Q Consensus 283 ~~~l~~~~~dg~i~i~~~~~~~~~-~~------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 346 (914)
++.+++++.||.+++|........ .+ .+++. +.......+..+
T Consensus 240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 298 (814)
T 3mkq_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL--------------------- 298 (814)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEE---------------------
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEE---------------------
T ss_conf 99999990899699998999947778406888679999924999509999907987999---------------------
Q ss_pred EECCCCCCCCCEEEECCCCCEEEEECCC----CEEEEEEE------CCC---------CCCCCCEEEEEEECCCCEEEEE
Q ss_conf 4339755588058978899799999399----09999820------333---------3466735699992188589983
Q 002511 347 KELGTCDLYPQSLKHNPNGRFVVVCGDG----EYIIYTAL------AWR---------NRSFGSALEFVWSSDGEYAVRE 407 (914)
Q Consensus 347 ~~~~~~~~~~~~l~~s~dg~~la~~~~g----~~~i~~~~------~~~---------~~~~~~~~~~~~s~~g~~l~~~ 407 (914)
.+. .....+.++|+|+.+++++.. .+...... ... ......+.+++|+|+|+++++.
T Consensus 299 -~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~ 374 (814)
T 3mkq_A 299 -SLG---NDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVV 374 (814)
T ss_dssp -ECS---CCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEE
T ss_pred -ECC---CCCCEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEE
T ss_conf -767---9974167779987899776366411246653046555556762014651178876577406899999989994
Q ss_pred CCCEEEEECCCCCCCEE----EECCCCCCEEECCCEEEEEECC-EEEEEECCCCCEEEEEECCEEEEEECCCC---CEEE
Q ss_conf 69829983257522001----2057631036438499997489-19998636781789987112089991799---9999
Q 002511 408 SSSKIKIFSKNFQEKRS----VRPTFSAERIYGGTLLAMCSND-FICFYDWAECRLIRRIDVTVKNLYWADSG---DLVA 479 (914)
Q Consensus 408 ~~~~i~i~~~~~~~~~~----~~~~~s~~~i~~g~~La~~~~~-~i~i~d~~~~~~i~~~~~~i~~i~~s~dg---~~la 479 (914)
+++.+.+|+........ ....|+|+ +.++++++.+ .+.+|+.- ......+..+.|+++| .+++
T Consensus 375 ~~~~~~i~~~~~~~~~~~~~i~~~~~spd----g~~la~~~~~g~v~l~~~~-----~~~~~~v~~~~~s~dg~~~~~l~ 445 (814)
T 3mkq_A 375 GDGEYVIYTALAWRNKAFGKCQDFVWGPD----SNSYALIDETGQIKYYKNF-----KEVTSWSVPMHSAIDRLFSGALL 445 (814)
T ss_dssp ETTEEEEEETTTTEEEEEEECSEEEECTT----SSCEEEECTTCCEEEEETT-----EECTTCCCCCSSCCCEEECSSSE
T ss_pred CCCEEEEEECCCCCCCCCCCEEEEEEECC----CCEEEEEECCCCEEEEECC-----CCCCCEEECCCCCCCCEECCEEE
T ss_conf 29889999874544567995479999479----9859999689839999777-----77524397378675523654699
Q ss_pred EEECCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEC--CEEEEE------CCCCEEEEEECC-
Q ss_conf 99498299999318889976617999874453342357555456778668944--789997------269749999889-
Q 002511 480 IASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVG--DCFIYN------NSSWRLNYCVGG- 550 (914)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~i~~~~w~~--~~~i~~------~~~~~l~~~~~~- 550 (914)
+++.++.+.+|. ++. +. .+..+........|.. ..++.. .......+....
T Consensus 446 ~~~~d~~v~~~d--------~~~-------~~-----~~~~~~~~~~~v~~s~dg~~la~~~~~~~~~~~~~~~~~~~~~ 505 (814)
T 3mkq_A 446 GVKSDGFVYFFD--------WDN-------GT-----LVRRIDVNAKDVIWSDNGELVMIVNTNSNGDEASGYTLLFNKD 505 (814)
T ss_dssp EEEETTEEEEEC--------TTT-------CC-----EEEEESSCEEEEEECTTSSEEEEEECCCSSCSCSEEEEEECHH
T ss_pred EEECCCEEEEEE--------CCC-------CC-----EEEEEECCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEECHH
T ss_conf 996699899999--------876-------95-----9999735888799969999999998676667742899995468
Q ss_pred -------------------EEEEEEECCCCEE-------EEEEEECCCEEEEEECCCCEEEEEECCH--HHHHHHHHHCC
Q ss_conf -------------------7749983034268-------9989630889999936882689983612--67688999806
Q 002511 551 -------------------EVTTMFHLDRPMY-------LLGYLASQSRVYLIDKEFNVMGYTLLLS--LIEYKTLVMRG 602 (914)
Q Consensus 551 -------------------~~~~i~~~~~~~~-------~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~~~~~~~~~ 602 (914)
....+........ ++-+....+++..+-.........+... +..|...--+-
T Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~w~~~~~i~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 585 (814)
T 3mkq_A 506 AYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKV 585 (814)
T ss_dssp HHHHHHHHTCCBTTTBCTTTEEEEEEECSCCSEEEEETTEEEEECTTSEEEEEETTEEEEEEECSSCCEEEEEEGGGTEE
T ss_pred HHHHHHHCCCCCCCCCHHHHEEEEEEECCEEEEEEEECCEEEEECCCCEEEEEECCEEEEEEECCCCEEEEEEEECCCEE
T ss_conf 86666641687621250222136457642787659808889997688708999698668999989667999998329999
Q ss_pred CHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH-CCCCC------CCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 98889625699994017899999993998365543-14586------630220001399899999999809967999999
Q 002511 603 DLERANEILPSIPKEHHNSVARFLESRGMIEEAIE-VATDP------DYRFELAIQLGRLEVAQEIATEVQSESKWKQLG 675 (914)
Q Consensus 603 ~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~a~~-~~~~~------~~~f~~~l~l~~~~~A~~~a~~~~~~~~w~~la 675 (914)
.+-+.......................+..+.|.. +.... .....+..+++.+++|+++++. + ..-.
T Consensus 586 ~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~i~~~~~~~~~~~~l~~~~~~~~a~~~~~~---~---~~~f 659 (814)
T 3mkq_A 586 YLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPD---Q---DQKF 659 (814)
T ss_dssp EEECTTCCEEEEECCHHHHHHHHHHHTTCHHHHHHHTGGGCCCHHHHHHHHHHHHHTTCHHHHHHHCCC---H---HHHH
T ss_pred EEECCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHEECCCC---C---CHHE
T ss_conf 999288887999989099999699870799999988874288467899999999868986896052789---3---1425
Q ss_pred HHHHHCCCHHHHHHHH----------------HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH
Q ss_conf 9999749911589999----------------881895514778772299888999999999929923988999972998
Q 002511 676 ELAMSTGKLEMAEGCM----------------KQAMDLSGLLLLYSSLGDAEGISKLASLAKEQGKNNVAFLCLFMLGKL 739 (914)
Q Consensus 676 ~~al~~~~~~~A~~~y----------------~~~~d~~~l~~l~~~~g~~~~~~~~~~~a~~~~~~~~a~~~~~~~g~~ 739 (914)
+.++..|+++.|.++. .+.++++.+..+|...+|.+++..+.......++...+...++..|++
T Consensus 660 ~~~l~~~~~~~A~~~~~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~ 739 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKF 739 (814)
T ss_dssp HHHHHHTCHHHHHHHHTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred EHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
T ss_conf 02145099999999998617676899999999984998999999987027135589987729999999999999985866
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 8999999987992588998885099707899999998542009243421189934--7776424799998888875025
Q 002511 740 EDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEE--YSNLFDDWQVALAVESKAAATR 816 (914)
Q Consensus 740 ~~a~~l~~~~~~~~~A~~~a~~~~~~~~~~~~~~~~~~L~~~~~~~a~~l~~p~~--~~~~~~~~~~~~~~e~~~~~~~ 816 (914)
+.|..+|+.++++++|++|++.... |.+++. +|+... |.+ -+.+...|+.+|+..|.++.|.
T Consensus 740 ~~A~~~~~~~g~~~~a~~~~~~~~~---------~~~A~~-----lA~~~~-~~~~~i~~~~~~~~~~L~~~~~~~~a~ 803 (814)
T 3mkq_A 740 NLAFNAYWIAGDIQGAKDLLIKSQR---------FSEAAF-----LGSTYG-LGDNEVNDIVTKWKENLILNGKNTVSE 803 (814)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTTC---------HHHHHH-----HHHHTT-CCHHHHHHHHHHHHHHHHTTTCHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCCC---------HHHHHH-----HHHHHC-CCHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 7999999880999999999998699---------478999-----998709-975788999999999987616466898
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=412.77 Aligned_cols=463 Identities=16% Similarity=0.193 Sum_probs=347.5
Q ss_pred HHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC--CEEEEEEECCCCEEEEEEECCCCEEEEEECC----C
Q ss_conf 342342458888899999689997999966991999958999--3447964059886799996599999999789----7
Q 002511 6 EIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQ--TMAKSFEVTELPVRSAKFVARKQWVVAGADD----M 79 (914)
Q Consensus 6 ~~~~~l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~d----g 79 (914)
...+.+.+|.+.|++++|+|+|.+||+|+.||.|+|||+.++ .....+..|.++|.+++|+|+++.|++++.+ +
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 129 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred CCCEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEE
T ss_conf 42737658998659999999996899994899789948989841566762255784489998999997999989977366
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEEECCCC-EEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEE
Q ss_conf 799998899906699815898779999908999-9999986992999987999248998405862279999906999999
Q 002511 80 FIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTF 158 (914)
Q Consensus 80 ~i~iwd~~t~~~~~~~~~h~~~i~~i~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l 158 (914)
.|++|+ +++....+.+|...|++++|+|+++ .|++++.|+.|++||...+ .+...+.+|...|.+++|+| ++.++
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-~~~~~l~~H~~~V~~v~fsp-dg~~l 205 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-KFKSTFGEHTKFVHSVRYNP-DGSLF 205 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-EEEEEECCCSSCEEEEEECT-TSSEE
T ss_pred EEEEEE--CCCCCCEECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCC-EEEEEECCCCCCEEEEEECC-CCCEE
T ss_conf 999963--899763254788983699988999829999928980999979997-57665200257169999979-99989
Q ss_pred EEEECCCCEEEEECCCCCCCEEEE-------CCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCC---
Q ss_conf 999689929999899999717980-------6898746999966799589999986993999978999468984275---
Q 002511 159 ASASLDRTIKIWNLGSPDPNFTLD-------AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGH--- 228 (914)
Q Consensus 159 ~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--- 228 (914)
++++.|++|++||+.+++....+. +|...|.+++|+|++. ++++++.|++|++||+.+++++.++..+
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~--~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT--KIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCC--EEEEEECCCEEEEEECCCCCEEEEECCCCCC
T ss_conf 99989991999889998286651366432356678789999979999--9999908980999968887013440478876
Q ss_pred CCCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCEEE-
Q ss_conf 3366999990899989999879909999699861577750388448999995499979999628908998178864067-
Q 002511 229 THNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPVAS- 307 (914)
Q Consensus 229 ~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~- 307 (914)
......+.| ++..+++++.|+.+++|+...++....+..|...|++++|+|+++++++++.|+.+++|.........
T Consensus 284 ~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 284 EDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CCEEEEEEE--CCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEE
T ss_conf 640689997--388799995899689996889974469837888889999918999899995898499997887925632
Q ss_pred -------------ECCCCCEEEEE-ECCEEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEECC
Q ss_conf -------------70899399996-0717999954326510105896210023433975558805897889979999939
Q 002511 308 -------------MDNSGKIIWAK-HNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGD 373 (914)
Q Consensus 308 -------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~~ 373 (914)
+.+++.++... .+.++. |+...+........ .......+..++++|+|+.++++.+
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~---------w~~~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~~~~~~~ 431 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKV---------VPAGGSGVDSSKAV-ANKLSSQPLGLAVSADGDIAVAACY 431 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEE---------ECSSSSSSCTTSCC-EEECSSCEEEEEECTTSSCEEEEES
T ss_pred CCCCCCCEEEEEEECCCCCEEEEECCCCEEE---------EECCCCCCCCCCEE-EEECCCCCCEEEEECCCCEEEEEEC
T ss_conf 1667765078999878996999984896689---------54688543565212-0014899707998079969999967
Q ss_pred CCEEEEEEECC-CCCCCCCEEEEEEECCCCEEEEEC-CCEEEEECCCCCCCE----------EEECCCCCCEEECCCEEE
Q ss_conf 90999982033-334667356999921885899836-982998325752200----------120576310364384999
Q 002511 374 GEYIIYTALAW-RNRSFGSALEFVWSSDGEYAVRES-SSKIKIFSKNFQEKR----------SVRPTFSAERIYGGTLLA 441 (914)
Q Consensus 374 g~~~i~~~~~~-~~~~~~~~~~~~~s~~g~~l~~~~-~~~i~i~~~~~~~~~----------~~~~~~s~~~i~~g~~La 441 (914)
+.+.+|+.... .......+.+++|+|+|+++++++ ++.|++|++...... .....|+|+ |++|+
T Consensus 432 ~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspd----g~~la 507 (611)
T 1nr0_A 432 KHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN----GAFLV 507 (611)
T ss_dssp SEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTT----SSEEE
T ss_pred CEEEEEECCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCC----CCEEE
T ss_conf 63999848943464068895499992899899996899739999945992224101577886079999899----99899
Q ss_pred EEECC-EEEEEECCC-CCEEEE-----EECCEEEEEECCCCCEEEEEECCEEEEEE
Q ss_conf 97489-199986367-817899-----87112089991799999999498299999
Q 002511 442 MCSND-FICFYDWAE-CRLIRR-----IDVTVKNLYWADSGDLVAIASDTSFYILK 490 (914)
Q Consensus 442 ~~~~~-~i~i~d~~~-~~~i~~-----~~~~i~~i~~s~dg~~la~~~~~~~~~~~ 490 (914)
+++.+ +|++|++.+ ++++.. +...|.+++|+|||++|++++.|+.+.+|
T Consensus 508 s~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW 563 (611)
T 1nr0_A 508 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 563 (611)
T ss_dssp EEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 99489989998857787223210264046642589989989979999799729999
No 8
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=393.57 Aligned_cols=457 Identities=25% Similarity=0.399 Sum_probs=361.8
Q ss_pred CHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEE
Q ss_conf 03423424588888999996899979999669919999589993447964059886799996599999999789779999
Q 002511 5 LEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVY 84 (914)
Q Consensus 5 ~~~~~~l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~iw 84 (914)
.+..+.+.+|.+.|++++|+|++++|++++.|+.|+|||. +++.+..+.+|..+|.+++|+|++++|++++.|+.+++|
T Consensus 47 ~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~ 125 (577)
T 2ymu_A 47 GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 125 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEC
T ss_conf 9789999689899899999899999999969897999989-997899997899988999998999989998079833520
Q ss_pred ECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECC
Q ss_conf 88999066998158987799999089999999986992999987999248998405862279999906999999999689
Q 002511 85 NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLD 164 (914)
Q Consensus 85 d~~t~~~~~~~~~h~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p~~~~~l~~~~~d 164 (914)
+... ........+...+.++.++|++..+++++.++.+.+|+.... .......+...+.++.++| ++..+++++.|
T Consensus 126 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 201 (577)
T 2ymu_A 126 NRNG-QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHSSSVWGVAFSP-DGQTIASASDD 201 (577)
T ss_dssp ETTC-CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC--EEEEEECCSSCEEEEEECT-TSSCEEEEETT
T ss_pred CCCC-CEEEECCCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCEE--EEEECCCCCCCEEEEEECC-CCCEEEEECCC
T ss_conf 2355-200110477774355542037763200255531000000000--0000268776356654169-97789998599
Q ss_pred CCEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEE
Q ss_conf 92999989999971798068987469999667995899999869939999789994689842753366999990899989
Q 002511 165 RTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPII 244 (914)
Q Consensus 165 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~i~~~~~~~~l 244 (914)
+.|++|+. +++....+..|...+.+++|+|++. ++++++.++.|++|+.. ++.+..+.+|...|.+++|+|+++.+
T Consensus 202 ~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~--~l~~~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l 277 (577)
T 2ymu_A 202 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ--TIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTI 277 (577)
T ss_dssp SEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS--CEEEEETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCC--EEEEEECCCEEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEE
T ss_conf 98999949-9968999946889889999979999--99999189989999599-97999980688987999996899999
Q ss_pred EEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCE------------EEECCCC
Q ss_conf 9998799099996998615777503884489999954999799996289089981788640------------6770899
Q 002511 245 ITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIGREEPV------------ASMDNSG 312 (914)
Q Consensus 245 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~dg~i~i~~~~~~~~------------~~~~~~~ 312 (914)
++++.|+.|++|+.. ++....+..|...+++++|+|+++.+++++.+|.+++|....... ..+.+++
T Consensus 278 ~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g 356 (577)
T 2ymu_A 278 ASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDG 356 (577)
T ss_dssp EEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEECCCEEEEEECC-CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 999599979999489-9589997068897699999999999999969995999969997257874788977999998999
Q ss_pred CEEEEEECC--EEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEC-CCCEEEEEEECCC----
Q ss_conf 399996071--799995432651010589621002343397555880589788997999993-9909999820333----
Q 002511 313 KIIWAKHNE--IQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG-DGEYIIYTALAWR---- 385 (914)
Q Consensus 313 ~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~-~g~~~i~~~~~~~---- 385 (914)
..+...... +.. |+ .+++.+ ..+..+...+++++|+|+|++|++++ ++.+.+|+.....
T Consensus 357 ~~l~~~~~dg~v~~---------~~-~~~~~~----~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 357 QTIASASDDKTVKL---------WN-RNGQLL----QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 422 (577)
T ss_dssp SEEEEEETTSEEEE---------EE-TTCCEE----EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEE
T ss_pred CEEEEEECCCEEEE---------EC-CCCCEE----EEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEE
T ss_conf 99999969998999---------90-899789----98527889748999989999999994999899996999789896
Q ss_pred CCCCCCEEEEEEECCCCEEEEEC-CCEEEEECCCCCCCEEEE--------CCCCCCEEECCCEEEEEECC-EEEEEECCC
Q ss_conf 34667356999921885899836-982998325752200120--------57631036438499997489-199986367
Q 002511 386 NRSFGSALEFVWSSDGEYAVRES-SSKIKIFSKNFQEKRSVR--------PTFSAERIYGGTLLAMCSND-FICFYDWAE 455 (914)
Q Consensus 386 ~~~~~~~~~~~~s~~g~~l~~~~-~~~i~i~~~~~~~~~~~~--------~~~s~~~i~~g~~La~~~~~-~i~i~d~~~ 455 (914)
..+...+.+++|+|+++++++++ ++.|++|+.+.+....+. ..|+|+ +++|++++.+ .|++||. +
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd----~~~las~~~d~~i~iw~~-~ 497 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD----GQTIASASDDKTVKLWNR-N 497 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT----SCEEEEEETTSEEEEEET-T
T ss_pred CCCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEECCC----CCEEEEEECCCEEEEECC-C
T ss_conf 28899757999989999999993999899997999889997278997789999699----999999919897999939-9
Q ss_pred CCEEEEEEC---CEEEEEECCCCCEEEEEECCEEEEEE
Q ss_conf 817899871---12089991799999999498299999
Q 002511 456 CRLIRRIDV---TVKNLYWADSGDLVAIASDTSFYILK 490 (914)
Q Consensus 456 ~~~i~~~~~---~i~~i~~s~dg~~la~~~~~~~~~~~ 490 (914)
+++++.+.+ .|.+++|+|+|++|++++.|+.+.+|
T Consensus 498 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEE
T ss_conf 97899986799998999991899999999896999999
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=373.20 Aligned_cols=467 Identities=12% Similarity=0.080 Sum_probs=342.7
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCE
Q ss_conf 24588888999996899979999669919999589993447964059886799996599999999789779999889990
Q 002511 11 LAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFVARKQWVVAGADDMFIRVYNYNTMD 90 (914)
Q Consensus 11 l~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~i~~s~~~~~l~~g~~dg~i~iwd~~t~~ 90 (914)
..+|.+.|++++|+|++.+||+|+.||.|+||+..+.+....+. |..+|.+++|+| +++|++++.|+.|++||+.+++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred CCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECC-CCCCEEEEEECC-CCEEEEEECCCEEEEEECCCCC
T ss_conf 16889984899997999989999297989999689947999868-999779999908-9889999895959999899996
Q ss_pred EEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCEEE----------EEEECCCCCEEEEEECCCCCCEEEE
Q ss_conf 669981589877999990899999999869929999879992489----------9840586227999990699999999
Q 002511 91 KVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWMCT----------QIFEGHSHYVMQVTFNPKDTNTFAS 160 (914)
Q Consensus 91 ~~~~~~~h~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----------~~~~~~~~~i~~i~~~p~~~~~l~~ 160 (914)
.+..+. |...|++++|+|++.++++|+.||.|++||++++.... ..+.+|...|.+++|+|.+...+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEC-CCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEE
T ss_conf 899974-8998799998799998999949992999999999626503043210002544578973899976699998999
Q ss_pred EECCCCEEEEECCCCCCCEEEECC------------------CCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE
Q ss_conf 968992999989999971798068------------------98746999966799589999986993999978999468
Q 002511 161 ASLDRTIKIWNLGSPDPNFTLDAH------------------QKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCV 222 (914)
Q Consensus 161 ~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~v~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 222 (914)
++.|+.| +||+++++....+..| ...|.+++|+|++. ++++++.||.|++||+++++++
T Consensus 170 g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~--~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL--HIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS--EEEEEETTCCEEEEETTTCCEE
T ss_pred EECCCCE-EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC--EEEEEECCCEEEEEECCCCCEE
T ss_conf 9189849-998778965799833557767776544332345677768999859999--9999989993999987899688
Q ss_pred EE--EC---C-------------CCCCEEEEEEEC----CC-CEEEEEECC-----CEEEEEECC---------------
Q ss_conf 98--42---7-------------533669999908----99-989999879-----909999699---------------
Q 002511 223 QT--LE---G-------------HTHNVSAVCFHP----EL-PIIITGSED-----GTVRIWHAT--------------- 259 (914)
Q Consensus 223 ~~--~~---~-------------~~~~i~~i~~~~----~~-~~l~~~~~d-----g~i~iwd~~--------------- 259 (914)
.. +. . +...|.+++|++ ++ .++++|+.+ ..+.+|+..
T Consensus 247 ~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~ 326 (902)
T 2oaj_A 247 MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKN 326 (902)
T ss_dssp EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 88850123457877767888855567745799973499988789996887777888528999547898755542556546
Q ss_pred ---CCEEEEEEE-CCCCCEEEEEEEC----------CCCEEEEEECCCEEEEECCCCCCEEEECCC-CCEEEEEECCEEE
Q ss_conf ---861577750-3884489999954----------999799996289089981788640677089-9399996071799
Q 002511 260 ---TYRLENTLN-YGLERVWAIGYMK----------SSRRIVIGYDEGTIMVKIGREEPVASMDNS-GKIIWAKHNEIQT 324 (914)
Q Consensus 260 ---~~~~~~~~~-~~~~~v~~i~~~~----------~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 324 (914)
+.+....+. .+...+..+.+.+ +...+++++.+|.+++|............. ...+......+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~ 406 (902)
T 2oaj_A 327 YYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATT 406 (902)
T ss_dssp HHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEE
T ss_pred HHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 64174522787418999547999977889886778785069999179848999789998556555689852235897248
Q ss_pred EEEEEC-CCCEECCC-CCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEC-CCCEEEEEEECCCC---------------
Q ss_conf 995432-65101058-9621002343397555880589788997999993-99099998203333---------------
Q 002511 325 VNIKSV-GADYEVTD-GERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCG-DGEYIIYTALAWRN--------------- 386 (914)
Q Consensus 325 ~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~-~g~~~i~~~~~~~~--------------- 386 (914)
+.+... ...|.... .. ......+..+...+..++|+|++++|++++ |+.+.+|+......
T Consensus 407 ~~~s~~~~~~w~~~~~~~--~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~ 484 (902)
T 2oaj_A 407 SMAASVPNKLWLGALSAA--QNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLN 484 (902)
T ss_dssp EEEEEEEHHHHHHHHHTT--BCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTT
T ss_pred EEEEECCHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHCC
T ss_conf 999974999998888604--699975457857787533366675899965898389997877645677367750154137
Q ss_pred -CCCCCEEEEEEECCCCEEEEEC-CCEEEEECCCCCC-------------------------------------------
Q ss_conf -4667356999921885899836-9829983257522-------------------------------------------
Q 002511 387 -RSFGSALEFVWSSDGEYAVRES-SSKIKIFSKNFQE------------------------------------------- 421 (914)
Q Consensus 387 -~~~~~~~~~~~s~~g~~l~~~~-~~~i~i~~~~~~~------------------------------------------- 421 (914)
.+...+.+++|+|+++++++++ +++|++|+.....
T Consensus 485 ~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 564 (902)
T 2oaj_A 485 KAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQG 564 (902)
T ss_dssp CSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78887646999638999699994585799999248655575455778665113455134679654322423689887776
Q ss_pred ---CEEE-------E-CCCCCCEEECCCEEEEEECC-EEEEEECCCCCEEEEE---------ECCEEEEEEC-----CCC
Q ss_conf ---0012-------0-57631036438499997489-1999863678178998---------7112089991-----799
Q 002511 422 ---KRSV-------R-PTFSAERIYGGTLLAMCSND-FICFYDWAECRLIRRI---------DVTVKNLYWA-----DSG 475 (914)
Q Consensus 422 ---~~~~-------~-~~~s~~~i~~g~~La~~~~~-~i~i~d~~~~~~i~~~---------~~~i~~i~~s-----~dg 475 (914)
...+ . .+|||+ | +||+++.| +|++||+.++..+... ...|++++|+ +||
T Consensus 565 ~~~~~~l~~h~~~V~svafSpd----G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg 639 (902)
T 2oaj_A 565 FMPSTAVHANKGKTSAINNSNI----G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDG 639 (902)
T ss_dssp EEEEEEECCCSCSEEEEEECBT----S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSS
T ss_pred CCEEEEEECCCCCEEEEEECCC----C-EEEEEECCCCEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCC
T ss_conf 0146999868886779996487----6-8999958976999988898399970246726466661399999998417898
Q ss_pred ---CEEEEEECCEEEEEE
Q ss_conf ---999999498299999
Q 002511 476 ---DLVAIASDTSFYILK 490 (914)
Q Consensus 476 ---~~la~~~~~~~~~~~ 490 (914)
.+|++++.|+.+++|
T Consensus 640 ~~~~~l~sgs~D~tv~~w 657 (902)
T 2oaj_A 640 YSSILMVCGTDMGEVITY 657 (902)
T ss_dssp SEEEEEEEEETTSEEEEE
T ss_pred CCCEEEEEEECCCCEEEE
T ss_conf 763389999568739999
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=370.15 Aligned_cols=542 Identities=12% Similarity=0.106 Sum_probs=404.7
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC----CEEEEEEECCCC-EEEEEEEC--CCCEEEEEECCCEEEEE
Q ss_conf 458888899999689997999966991999958999----344796405988-67999965--99999999789779999
Q 002511 12 AQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQ----TMAKSFEVTELP-VRSAKFVA--RKQWVVAGADDMFIRVY 84 (914)
Q Consensus 12 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~----~~~~~~~~~~~~-v~~i~~s~--~~~~l~~g~~dg~i~iw 84 (914)
..|.+.|.+++|+|++++|++++ ++.|.+|++.++ .....+.+|... |.+++|+| ++++|++++.||.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEC-CCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEEEEE
T ss_conf 77658536899889999799935-98499997778877651431880578844999997967899889996489879997
Q ss_pred ECCCC--------EEEEEEECCCCCEEEEEEECCCCEEEEEECC----CEEEEEECCCCCEEEEEEECCCCCEEEEEECC
Q ss_conf 88999--------0669981589877999990899999999869----92999987999248998405862279999906
Q 002511 85 NYNTM--------DKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD----MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNP 152 (914)
Q Consensus 85 d~~t~--------~~~~~~~~h~~~i~~i~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~i~~i~~~p 152 (914)
++.++ +....+..|...|.+++|+|+++++++++.+ +.|.+|+ .+ .....+.+|...|.++.|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~-~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SG-NSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TC-CEEEECCSCSSCEEEEEECS
T ss_pred ECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEE--CC-CCCEEEECCCCCEEEEEECC
T ss_conf 6888765544554200011125663799999079998999316877755799997--89-81031306774388999887
Q ss_pred CCCC-EEEEEECCCCEEEEECCCCCCCEEEECCCC---CEEEEEEEEC-CCCCEEEEEECCCEEEEEECCCCCEEEEE-C
Q ss_conf 9999-999996899299998999997179806898---7469999667-99589999986993999978999468984-2
Q 002511 153 KDTN-TFASASLDRTIKIWNLGSPDPNFTLDAHQK---GVNCVDYFTG-GDKPYLITGSDDHTAKVWDYQTKSCVQTL-E 226 (914)
Q Consensus 153 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~ 226 (914)
++. .+++++.|+.|++||+..++....+..|.. .+.+++|+|+ ++ ++++++.++.|++||+.+++.+..+ .
T Consensus 171 -~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~ 247 (615)
T 1pgu_A 171 -SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE--FVITVGSDRKISCFDGKSGEFLKYIED 247 (615)
T ss_dssp -SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC--EEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred -CCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCC--EEEEEECCCEEEEEECCCCCEEEEECC
T ss_conf -89968999957995999969996101320256777742899997897788--899986898089998999978589525
Q ss_pred ---CCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEECC----CCCEEEEEEECCCCEEEEEECCCEEEEEC
Q ss_conf ---75336699999089998999987990999969986157775038----84489999954999799996289089981
Q 002511 227 ---GHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYG----LERVWAIGYMKSSRRIVIGYDEGTIMVKI 299 (914)
Q Consensus 227 ---~~~~~i~~i~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~i~~~~~~~~l~~~~~dg~i~i~~ 299 (914)
.|...|.+++|+ ++.++++++.||.|++||+.+++....+..+ ...+.++.|. ++..+++++.+|.+.+|.
T Consensus 248 ~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 248 DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred CCCCCCCCEEEEEEC-CCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CCCEEEEEECCCCEEEEE
T ss_conf 444567755899981-899799984899489997888927878847877545714699918-997699997899789998
Q ss_pred CCCCCE-EEECCCCCEEEE-EECCEEEEEEEECCCCEECCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCEE
Q ss_conf 788640-677089939999-607179999543265101058962100234339755588058978899799999399099
Q 002511 300 GREEPV-ASMDNSGKIIWA-KHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYI 377 (914)
Q Consensus 300 ~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~s~dg~~la~~~~g~~~ 377 (914)
...... ..+......+.. .-..+...........|+.. ... ..+...+.+++|++++.+++.+.++.+.
T Consensus 326 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~-------~~~--~~~~~~v~~~~~~~~~~l~~~~~d~~i~ 396 (615)
T 1pgu_A 326 LGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSS-------SMH--QDHSNLIVSLDNSKAQEYSSISWDDTLK 396 (615)
T ss_dssp TTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTT-------EEE--CCCCSCEEEEECCSTTCCEEEETTTEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEECCCCEEEEEECH-------HHC--CCCCCCEEEEEECCCCEEEEEECCCCEE
T ss_conf 8899288999477787899995674898799959998752-------415--7556851799978986799995899799
Q ss_pred EEEEECCCCCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCC-CCEEEECCCCCCEEE-CCCEEEEEEC-C-EEEEEEC
Q ss_conf 9982033334667356999921885899836982998325752-200120576310364-3849999748-9-1999863
Q 002511 378 IYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ-EKRSVRPTFSAERIY-GGTLLAMCSN-D-FICFYDW 453 (914)
Q Consensus 378 i~~~~~~~~~~~~~~~~~~~s~~g~~l~~~~~~~i~i~~~~~~-~~~~~~~~~s~~~i~-~g~~La~~~~-~-~i~i~d~ 453 (914)
+|+....+... ....++|++++.+++...++.+.+|+.... ....+...+.+..+. .+.+|++++. + .|++||+
T Consensus 397 ~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~ 474 (615)
T 1pgu_A 397 VNGITKHEFGS--QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKL 474 (615)
T ss_dssp ETTEEEEECSS--CEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEET
T ss_pred EEECCCCCCCC--CCEEEEECCCCCEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEECCCEEEEEECCCCEEEEEEC
T ss_conf 98866676367--8469998289878999679826999446786655515678720778838889996568986999988
Q ss_pred CCCCEE-EEEE---CCEEEEEECCCCCEEEEEECCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEE
Q ss_conf 678178-9987---112089991799999999498299999318889976617999874453342357555456778668
Q 002511 454 AECRLI-RRID---VTVKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGL 529 (914)
Q Consensus 454 ~~~~~i-~~~~---~~i~~i~~s~dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~i~~~~ 529 (914)
.+++.. ..+. ..|.++.|+|++++|++++.++.+.+|.- .. ......+... ....+.+..
T Consensus 475 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~--------~~------~~~~~~~~~~--h~~~v~~~~ 538 (615)
T 1pgu_A 475 SDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDL--------QS------REVKTSRWAF--RTSKINAIS 538 (615)
T ss_dssp TEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEET--------TT------TEEEECCSCC--CSSCEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEC--------CC------CCCEEEEECC--CCCCEEEEE
T ss_conf 8854353336776575079999899998998179985998657--------77------7624676047--887146999
Q ss_pred E------------ECCEEEEECCCCEEEEEECCEE-EEEEE---CCCCEEEEEEEECCCEEEEEECCCCEEEEEECC
Q ss_conf 9------------4478999726974999988977-49983---034268998963088999993688268998361
Q 002511 530 W------------VGDCFIYNNSSWRLNYCVGGEV-TTMFH---LDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLL 590 (914)
Q Consensus 530 w------------~~~~~i~~~~~~~l~~~~~~~~-~~i~~---~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~l~~ 590 (914)
| ++.+++.....+.+..+..... ..+.. ...++.-+.+.+++. ++....++.+..|++..
T Consensus 539 ~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 539 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred ECCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECHHHHCCCCCEEEEEECCCCC-EEEECCCCEEEEEEEEC
T ss_conf 76832345332468888999817971999977888540311335943058999738997-28845996399996015
Done!