Your job contains 1 sequence.
>002516
MGSVEEKIKAGGLVIRAQTTLLEEMKLLKEMQDQSGARKAINSELWHACAGPLVFLPQVG
SLVYYFPQGHSEQADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTA
SDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT
TGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAA
AHAASNRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYM
GTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTSGLK
RPFHSGILATETEWGSLIKRPLACPEIAPGVMPYSSISNLCSEQLIKMMLKPQLVNNPGS
FAASSLQETSGAKGAHLEEVKTLQSTINQKPRLVPSEMNRIDNQNCSQICLNQADTVNSS
LSRINIPEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKPSGPLNP
QNLVNQHAFHNQNEGLLQLQSSWPMQSQLESVFQAQQINVPQSDSTAHSGSLPILDTDEW
MSHTSCNSLAGTYNRSPGPLPMFGLQEPSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSP
VDPLTSFTQQDHCSLNSSGLRDLSDESNNQSGIYSCLNIDVSNGGSTMIDHSVSSAILDE
FCTLKDANFQNPPDCLMNTFSSSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNVDF
DESSLLQNTSWQPVVPPMRTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMFGLEGLLN
DPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNSAAM
QGIDCTKPEGGRA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002516
(913 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 1605 4.1e-262 3
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 1069 1.4e-167 4
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 1017 2.6e-158 4
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 998 1.8e-147 4
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 793 2.8e-115 3
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 749 2.8e-111 3
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 734 1.7e-107 3
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 700 3.8e-102 4
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 701 5.5e-99 3
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 773 2.1e-88 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 596 1.2e-85 3
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 602 4.5e-83 3
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 583 8.3e-83 3
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 704 1.1e-82 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 608 2.6e-75 2
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 566 1.4e-70 2
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 381 1.4e-65 4
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 397 3.5e-56 3
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 372 2.2e-44 3
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 341 8.2e-39 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 258 3.7e-31 2
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 142 1.4e-08 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 139 2.9e-08 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 157 3.0e-08 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 152 1.8e-07 1
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 147 2.3e-07 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 150 2.6e-07 2
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 148 3.5e-07 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 148 4.2e-07 1
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 143 6.0e-07 3
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 133 6.4e-07 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 146 7.6e-07 1
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 125 9.1e-07 1
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 121 2.4e-06 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 141 2.8e-06 1
UNIPROTKB|Q6H543 - symbol:IAA7 "Auxin-responsive protein ... 108 3.2e-06 2
UNIPROTKB|Q5NB25 - symbol:IAA3 "Auxin-responsive protein ... 137 3.7e-06 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 134 6.2e-06 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 137 7.0e-06 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 135 7.7e-06 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 116 8.3e-06 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 122 1.1e-05 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 132 1.4e-05 1
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 119 2.4e-05 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 122 4.4e-05 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 118 5.7e-05 2
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 122 5.9e-05 1
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 118 7.1e-05 1
TAIR|locus:2119976 - symbol:PAP2 "AT4G29080" species:3702... 96 7.2e-05 2
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 125 0.00011 2
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 118 0.00015 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 120 0.00018 2
TAIR|locus:2034200 - symbol:IAA15 "indole-3-acetic acid i... 115 0.00024 1
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 117 0.00044 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 112 0.00051 1
TAIR|locus:2174562 - symbol:IAA33 "indole-3-acetic acid i... 111 0.00057 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 112 0.00096 1
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 1605 (570.0 bits), Expect = 4.1e-262, Sum P(3) = 4.1e-262
Identities = 317/463 (68%), Positives = 368/463 (79%)
Query: 74 ADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSVP 132
ADKD+DEIYAQMSLQPV+SE+DVFP+PDFG L+ SKHP+EFFCKTLTASDTSTHGGFSVP
Sbjct: 117 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVP 176
Query: 133 RRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 192
RRAAEKLFPPLDY+ QPPTQELVVRDLH+NTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL
Sbjct: 177 RRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 236
Query: 193 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFTI 252
RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL +NR+ F I
Sbjct: 237 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 296
Query: 253 FYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDPL 312
FYNPRACP++FVIPLAKYRK++ G+Q+SVGMRFGMMFETE+SGKRRYMGTIVGISDLDPL
Sbjct: 297 FYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 356
Query: 313 RWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTSGLKRPFHSGILATET 372
RWPGSKWRNLQVEWDEPGC+DK RVSPW+IETPESLFIFPSLTSGLKR H A ET
Sbjct: 357 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTSGLKRQLHPSYFAGET 416
Query: 373 EWGSLIKRPLA-CPEIAPGVMPYSSISNLCSEQLIKMMLKPQLVNNPGSFAASSLQETSG 431
EWGSLIKRPL P+ A G+MPY+S ++ SEQL+KMM++P N SF + Q
Sbjct: 417 EWGSLIKRPLIRVPDSANGIMPYASFPSMASEQLMKMMMRPHNNQNVPSFMSEMQQNIVM 476
Query: 432 AKGAHLEEVKTLQSTI-NQKPRLVPSEMNRIDNQNCSQICLNQADTVNSSLSRINIPEKP 490
G L ++K Q + NQK SEM + QN ++ +N + + N+S N+ +
Sbjct: 477 GNGGLLGDMKMQQPLMMNQK-----SEM--VQPQN--KLTVNPSAS-NTSGQEQNLSQSM 526
Query: 491 HPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEK 533
P+K E G ++ ++ QS+EQ+S +T++ C+ EK
Sbjct: 527 SAPAKPENSTLSGCSSGRVQHGLEQSMEQASQVTTSTVCNEEK 569
Score = 753 (270.1 bits), Expect = 4.1e-262, Sum P(3) = 4.1e-262
Identities = 191/422 (45%), Positives = 251/422 (59%)
Query: 499 QAPPGMN--TDHLKSEPRQSIEQSSNLTSAADCSMEKP-SGPLNPQNLVNQHAFHNQNEG 555
Q P MN ++ ++ + + ++ S++ TS + ++ + S P P+N + G
Sbjct: 488 QQPLMMNQKSEMVQPQNKLTVNPSASNTSGQEQNLSQSMSAPAKPEN----STLSGCSSG 543
Query: 556 LLQ--LQSSWPMQSQLESVFQAQQINVPQSDSTAHSGSLPILDTDEWMSHTSCNSLAGTY 613
+Q L+ S SQ+ + + V Q + S P+ D+ + T Y
Sbjct: 544 RVQHGLEQSMEQASQVTTSTVCNEEKVNQLLQKPGASS-PV-QADQCLDITH-----QIY 596
Query: 614 NRSPGPLPMFGLQEPSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSPV--DPLTSFTQQD 671
P+ F E + +V + S G L++ + V D S D
Sbjct: 597 QPQSDPINGFSFLETDELTSQV-SSFQSLAGSYKQPFILSSQDSSAVVLPDSTNSPLFHD 655
Query: 672 HCSLNSSGLRDLSDESNNQSGIYSCLNIDVSNGG-STMIDHSVSSAILDEFCTLKDANFQ 730
+GL+ Q +Y+ NI +SN S ++D +S+ +LD+FC +KD +FQ
Sbjct: 656 VWDTQLNGLKFDQFSPLMQQDLYASQNICMSNSTTSNILDPPLSNTVLDDFCAIKDTDFQ 715
Query: 731 NPPD-CLM--NTFSSSQDVQSQITSASLADSQAFSRQDFPDNSGGT--SSSNVDFDESSL 785
N P CL+ N S +QDVQSQITSAS ADSQAFSRQDFPDNSGGT SSSNVDFD+ SL
Sbjct: 716 NHPSGCLVGNNNTSFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSL 775
Query: 786 LQNT---SWQPVVPP-MRTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMFGLEGLLND 841
QN+ SWQ + P +RTYTKVQKTGSVGRSIDVT+FK+Y+EL SAIE MFGLEGLL
Sbjct: 776 RQNSKGSSWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTH 835
Query: 842 PRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNSAAMQ 901
P+ + WKLVYVDYE+DVLLVGDDPWEEFVGCVRCIRILSP EV+QMSEEGMKLLNSA +
Sbjct: 836 PQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAGIN 895
Query: 902 GI 903
+
Sbjct: 896 DL 897
Score = 205 (77.2 bits), Expect = 4.1e-262, Sum P(3) = 4.1e-262
Identities = 46/84 (54%), Positives = 51/84 (60%)
Query: 1 MGSVEEKIKA-----GGLVIRAQTTXXXXXXXXXXXQDQSGARK-AINSELWHACAGPLV 54
+ VE+K+K GG I T+ +DQSG RK INSELWHACAGPLV
Sbjct: 5 LSCVEDKMKTSCLVNGGGTITTTTSQSTLLEEMKLLKDQSGTRKPVINSELWHACAGPLV 64
Query: 55 FLPQVGSLVYYFPQGHSEQADKDT 78
LPQVGSLVYYF QGHSEQ T
Sbjct: 65 CLPQVGSLVYYFSQGHSEQVAVST 88
Score = 40 (19.1 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 414 LVNNPGSFAASSLQETSGAKGAHLEEVKTLQSTINQKPRLVPSEM 458
LVN G+ ++ Q T LEE+K L+ + ++ SE+
Sbjct: 17 LVNGGGTITTTTSQSTL------LEEMKLLKDQSGTRKPVINSEL 55
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 1069 (381.4 bits), Expect = 1.4e-167, Sum P(4) = 1.4e-167
Identities = 272/637 (42%), Positives = 362/637 (56%)
Query: 74 ADKDTDEIYAQMSLQPVNS-EKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVP 132
AD +TDE+YAQM+LQPVN +++ D GLK ++ P+EFFCKTLTASDTSTHGGFSVP
Sbjct: 85 ADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 133 RRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 192
RRAAEK+FPPLD++MQPP QE+V +DLHD TWTFRHIYRGQPKRHLLTTGWS+FV +KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 193 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFTI 252
AGDSVLF+RDEKSQLM+G+RRANRQ L SSV+S+DSMHIG+L +N S FTI
Sbjct: 205 FAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTI 264
Query: 253 FYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDPL 312
F+NPRA PS+FV+PLAKY K++Y Q+S+GMRF MMFETE+ G RRYMGT+ GISDLDP+
Sbjct: 265 FFNPRASPSEFVVPLAKYNKALYA-QVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPV 323
Query: 313 RWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE---TPESLFIFPSLTSGLKRPFHSGILA 369
RW GS+WRNLQV WDE D+ RVS WEIE TP +I P K P G+
Sbjct: 324 RWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP--FYICPPPFFRPKYPRQPGMPD 381
Query: 370 TETEWGSLIKRPLACPEIAPGV-MPYSSISNLCSEQLIKMMLKPQLVNNPGSFAASSLQE 428
E + + KR A P + M + S L++ M Q NNP S +A+ Q
Sbjct: 382 DELDMENAFKR--AMPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQ--NNPLSGSATP-QL 436
Query: 429 TSGAKGAHLEE---VKTLQSTIN-QKPRL--VPSEMNRIDNQN-CSQICLNQADTVNSSL 481
S +L +N Q P L S+ N+ + N SQ Q V S
Sbjct: 437 PSALSSFNLPNNFASNDPSKLLNFQSPNLSSANSQFNKPNTVNHISQQMQAQPAMVKSQQ 496
Query: 482 SRINIPEK-PHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKPSGPLN- 539
+ ++ H + ++Q M+ ++ +Q I + + A S + P+ P
Sbjct: 497 QQQQQQQQHQHQQQQLQQQQQLQMSQQQVQ---QQGIYNNGTIAVANQVSCQSPNQPTGF 553
Query: 540 PQNLVNQHAFHNQNEGLL-QLQSSWPMQ--SQLESVFQAQQINVPQSDSTAHSGSLPILD 596
Q+ + Q + + Q +S + SQ+ S Q Q Q H+ S + +
Sbjct: 554 SQSQLQQQSMLPTGAKMTHQNINSMGNKGLSQMTSFAQEMQF---QQQLEMHNSSQLLRN 610
Query: 597 TDEWMSHTSCNSLAGTYNRSPGPLPMFGLQEPSTMLPEVINPSLSFPGQEMWDHQLNNLR 656
E +S +SL +++P L M Q+ S+ P +PS Q + +L +
Sbjct: 611 QQE---QSSLHSLQQNLSQNPQQLQM---QQQSSK-P---SPSQQLQLQLL--QKLQQQQ 658
Query: 657 FLSPVDPLTSFTQQDHCSLN---SSGLRDLSDESNNQ 690
+ P++S Q +L S L+ L N Q
Sbjct: 659 QQQSIPPVSSSLQPQLSALQQTQSHQLQQLLSSQNQQ 695
Score = 387 (141.3 bits), Expect = 1.4e-167, Sum P(4) = 1.4e-167
Identities = 87/196 (44%), Positives = 121/196 (61%)
Query: 719 DEFCTLKDANFQNPPDCLMNTFSSSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNV 778
D + KD FQN + N ++ +D++++++SA+++ SQ+F P G S+
Sbjct: 884 DPLYSQKD--FQN---LVPNYGNTPRDIETELSSAAIS-SQSFGIPSIPFKPG-CSNEVG 936
Query: 779 DFDESSLLQNTS-WQPVVPPMRTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMFGLEG 837
++S ++ W MRTYTKVQK GSVGRSIDVT + YDEL + RMFG+EG
Sbjct: 937 GINDSGIMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEG 996
Query: 838 LLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNS 897
L DP ++WKLVY D+END+LLVGDDPWEEFV CV+ I+ILS EV+QMS +G
Sbjct: 997 QLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDGDLAAIP 1056
Query: 898 AAMQGIDCTKPEGGRA 913
Q C++ + G A
Sbjct: 1057 TTNQA--CSETDSGNA 1070
Score = 172 (65.6 bits), Expect = 1.4e-167, Sum P(4) = 1.4e-167
Identities = 35/50 (70%), Positives = 37/50 (74%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQA----DKDTDEI 81
G +K INS+LWHACAGPLV LP VGSLV YFPQGHSEQ K TD I
Sbjct: 15 GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFI 64
Score = 80 (33.2 bits), Expect = 5.0e-49, Sum P(4) = 5.0e-49
Identities = 49/195 (25%), Positives = 80/195 (41%)
Query: 413 QLVNNPGSFAASSLQETS----GAKGAHLEEVKTLQSTINQKPRLVPSEMN---RIDNQN 465
Q N P F+ S LQ+ S GAK H + + ++ + + EM +++ N
Sbjct: 545 QSPNQPTGFSQSQLQQQSMLPTGAKMTH-QNINSMGNKGLSQMTSFAQEMQFQQQLEMHN 603
Query: 466 CSQICLNQADTVNSSLSRI--NIPEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNL 523
SQ+ NQ + SSL + N+ + P ++ + P + L+ + Q ++Q
Sbjct: 604 SSQLLRNQQE--QSSLHSLQQNLSQNPQQLQMQQQSSKPSPS-QQLQLQLLQKLQQQQQQ 660
Query: 524 TSAADCSMEKPSGPLNPQNLVNQHAFHNQNEGLLQLQSSWPM----QSQLESVF-QAQQI 578
S + S L PQ Q +Q + LL Q+ P+ S S F Q QI
Sbjct: 661 QS-----IPPVSSSLQPQLSALQQTQSHQLQQLLSSQNQQPLAHGNNSFPASTFMQPPQI 715
Query: 579 NV-PQSDSTAHSGSL 592
V PQ + +L
Sbjct: 716 QVSPQQQGQMSNKNL 730
Score = 51 (23.0 bits), Expect = 1.4e-167, Sum P(4) = 1.4e-167
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 638 PSLSFPGQEMWDHQLNNLRFLSPVDPLTS---FTQQDHCSL 675
PS F G H NNL F ++ +TS ++Q+D +L
Sbjct: 855 PSFGFDGDCQSHHPRNNLAFPGNLEAVTSDPLYSQKDFQNL 895
Score = 49 (22.3 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 64 YYFPQGHSEQADKDT-DEIYAQMSLQPVNSEKDVFPIPDFGLK---PSKHP 110
+ F ++Q D T Y + PV ++ FP+P FG S HP
Sbjct: 819 FRFKSAVTDQIDVSTAGTTYCPDVVGPVQQQQ-TFPLPSFGFDGDCQSHHP 868
Score = 44 (20.5 bits), Expect = 2.7e-45, Sum P(4) = 2.7e-45
Identities = 37/176 (21%), Positives = 70/176 (39%)
Query: 402 SEQL-IKMMLKPQLVNNPGSF--AASSLQ-ETSGAKGAHLEEVKTLQSTINQKPRLVPSE 457
S+QL ++++ K Q S +SSLQ + S + +++ L S+ NQ+P +
Sbjct: 643 SQQLQLQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSHQLQQLLSSQNQQPLAHGNN 702
Query: 458 MNRIDN-QNCSQICLN---QADTVNSSLSRINIPEKPHPPSKCEK--QAPPGMNTDHLKS 511
QI ++ Q N +L H + +P NT H
Sbjct: 703 SFPASTFMQPPQIQVSPQQQGQMSNKNLVAAGRSHSGHTDGEAPSCSTSPSANNTGHDNV 762
Query: 512 EPRQSIEQSSNL-----TSAADCSMEKPSGPLNPQNLVNQHAFHNQNEGLLQLQSS 562
P + ++ SA+D E+ S P+ Q L + ++G++ ++S+
Sbjct: 763 SPTNFLSRNQQQGQAASVSASDSVFERASNPV--QELYTKTE-SRISQGMMNMKSA 815
Score = 37 (18.1 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 22/91 (24%), Positives = 34/91 (37%)
Query: 625 LQEPST-MLPEVINPSLSFP-GQEMWDHQLNNLRFLSPVDPLTSFTQQDHCSLNSSGLRD 682
++ PS LP N P ++W L L PV L + Q H ++ ++
Sbjct: 1 MKAPSNGFLPSS-NEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQK 59
Query: 683 LSDESNNQSGIYS---CLNIDVSNGGSTMID 710
+D N + S CL V+ T D
Sbjct: 60 QTDFIPNYPNLPSKLICLLHSVTLHADTETD 90
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 1017 (363.1 bits), Expect = 2.6e-158, Sum P(4) = 2.6e-158
Identities = 195/316 (61%), Positives = 244/316 (77%)
Query: 74 ADKDTDEIYAQMSLQPVNSEKDVFP-IP-DFGLKPSKHPSEFFCKTLTASDTSTHGGFSV 131
AD +TDE+YAQM+LQP+N+++ P +P + G+ PS+ P+ +FCKTLTASDTSTHGGFSV
Sbjct: 88 ADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV-PSRQPTNYFCKTLTASDTSTHGGFSV 146
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
PRRAAEK+FPPLDY+ QPP QEL+ RDLHDN W FRHI+RGQPKRHLLTTGWS+FV +KR
Sbjct: 147 PRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L AGDSVLFI ++K+QL++G+RRANR QT +PSSVLS+DSMH+G+L + S+FT
Sbjct: 207 LVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFT 266
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
IFYNPRA PS+FVIPLAKY K+VY T++SVGMRF M+FETEES RRYMGTI GI DLDP
Sbjct: 267 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDP 326
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPS-LTSGLKRPFHSGILA- 369
RW S WR+++V WDE ++Q RVS WEIE + ++PS LKRP+ G+ +
Sbjct: 327 TRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSF 386
Query: 370 ---TETEWGSLIKRPL 382
E + G + PL
Sbjct: 387 HGLKEDDMGMSMSSPL 402
Score = 357 (130.7 bits), Expect = 2.6e-158, Sum P(4) = 2.6e-158
Identities = 78/162 (48%), Positives = 104/162 (64%)
Query: 752 SASLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNT-SWQPVVPPMRTYTKVQKTGSV 810
S +L + + DF N T+ S+ DES LQ++ + P T+ KV K+GS
Sbjct: 749 STTLPFTSSNFNNDFSGNLAMTTPSSC-IDESGFLQSSENLGSENPQSNTFVKVYKSGSF 807
Query: 811 GRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFV 870
GRS+D++ F +Y EL S + RMFGLEG L DP + W+LV+VD ENDVLL+GDDPW EFV
Sbjct: 808 GRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFV 867
Query: 871 GCVRCIRILSPQEVEQMSEEGMKLLNSA-AMQGIDCTKPEGG 911
V CI+ILSPQEV+QM + G++LLNSA + +D P G
Sbjct: 868 SSVWCIKILSPQEVQQMGKRGLELLNSAPSSNNVD-KLPSNG 908
Score = 170 (64.9 bits), Expect = 2.6e-158, Sum P(4) = 2.6e-158
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 35 SGARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTD-EIYAQMSLQP 89
+G ++ +NSELWHACAGPLV LP VGS V YFPQGHSEQ T+ E+ A + P
Sbjct: 16 TGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYP 71
Score = 89 (36.4 bits), Expect = 2.4e-126, Sum P(3) = 2.4e-126
Identities = 70/350 (20%), Positives = 135/350 (38%)
Query: 413 QLVNNPG-SFAASSLQETSGAKGAHLEEVKTLQSTINQKPRLVPSEMNRIDNQNCSQICL 471
Q N+PG S + SL + + ++ + L Q+ +L + ++ Q Q+
Sbjct: 464 QFQNSPGFSMQSPSLVQPQMLQQQLSQQQQQLSQQQQQQQQLSQQQQQQLSQQQQQQLSQ 523
Query: 472 NQADTVNSSLSR---INIPEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAAD 528
Q ++ + + +PE P S+ + Q+ +HL + +Q ++ + S+A
Sbjct: 524 QQQQQLSQQQQQQAYLGVPETHQPQSQAQSQS-----NNHLSQQQQQVVDNHNPSASSAA 578
Query: 529 C--------SMEKPS-GPLNPQ-NLVNQHAFHNQNEGLLQLQSSWPMQSQLESVFQAQQI 578
S +P+ PL +L +Q +F + N G + + S +Q +
Sbjct: 579 VVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGGNNPISPLHTLLSNFSQDESSQLL 638
Query: 579 NVPQSDSTAHSGSLPILD--TDEWMSHTSCNSLAGTYNRSPGPLPMFGLQEPSTMLPEVI 636
++ +++S S P D H+ AG N + L G S + P +
Sbjct: 639 HLTRTNSAMTSSGWPSKRPAVDSSFQHSG----AGN-NNTQSVLEQLGQSHTSNVPPNAV 693
Query: 637 NPSLSFPG-QEMWDHQLNNLRFLSPVDPLTSFTQQDHCSL---NS-SGLRDLSDESNNQS 691
+ FPG +E Q + P L D SL N S LR + E + +
Sbjct: 694 SLP-PFPGGRECSIEQEGSAS--DPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDST 750
Query: 692 GI-YSCLNIDVSNGGSTMIDHSVSSAILDEFCTLKDANFQNPPDCLMNTF 740
+ ++ N + G+ + + S+ +DE L+ + + NTF
Sbjct: 751 TLPFTSSNFNNDFSGNLAM--TTPSSCIDESGFLQSSENLGSENPQSNTF 798
Score = 64 (27.6 bits), Expect = 1.0e-123, Sum P(3) = 1.0e-123
Identities = 44/183 (24%), Positives = 75/183 (40%)
Query: 613 YNRSPGPLPMFGLQEPSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSPVDPLTSFTQQDH 672
+ SPG F +Q PS + P+++ LS Q++ Q + LS +QQ
Sbjct: 465 FQNSPG----FSMQSPSLVQPQMLQQQLSQQQQQLSQQQQQQQQ-LSQQQQ-QQLSQQQQ 518
Query: 673 CSLNSSGLRDLSDESNNQSGIYSCLNIDVSNGGSTMIDHSVSSAILDEFCTLKDANFQNP 732
L+ + LS + Q+ Y L + ++ + ++ + + + D + +
Sbjct: 519 QQLSQQQQQQLSQQQQQQA--Y--LGVPETHQPQSQAQSQSNNHLSQQQQQVVDNHNPSA 574
Query: 733 PDCL----MNTF-SSSQDVQSQITS-ASLADSQAFSRQDFPDNSGG---TSSSNVDFDES 783
M+ F S+SQ S + S SL Q+FS + +N T SN DES
Sbjct: 575 SSAAVVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTNGGNNPISPLHTLLSNFSQDES 634
Query: 784 SLL 786
S L
Sbjct: 635 SQL 637
Score = 47 (21.6 bits), Expect = 2.6e-158, Sum P(4) = 2.6e-158
Identities = 30/162 (18%), Positives = 66/162 (40%)
Query: 389 PGVMPYSSISNLCSEQLIKMMLKPQLVNNPGSFAASSLQETSGAKGAHLEEVKTLQSTI- 447
P P S+++LC +Q +P S+ + ++ HL + ++
Sbjct: 592 PNTSPLQSMTSLCHQQSFSDTNGGNNPISPLHTLLSNFSQDESSQLLHLTRTNSAMTSSG 651
Query: 448 --NQKPRLVPS-EMNRIDNQNCSQIC--LNQADTVNSSLSRINIPEKPHPPSK-CEKQAP 501
+++P + S + + N N + L Q+ T N + +++P P P + C
Sbjct: 652 WPSKRPAVDSSFQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVSLP--PFPGGRECS---- 705
Query: 502 PGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKPSGPLNPQNL 543
+ + S+P + N+ S+ S+ P+G N +++
Sbjct: 706 --IEQEGSASDPHSHLLFGVNIDSS---SLLMPNGMSNLRSI 742
Score = 45 (20.9 bits), Expect = 4.2e-158, Sum P(4) = 4.2e-158
Identities = 39/139 (28%), Positives = 57/139 (41%)
Query: 617 PGPLPMF-GLQEPSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSP-VDPLTSFTQQDHCS 674
PG LP F GL+E + S+S P MWD L +L F V+P + Q
Sbjct: 381 PG-LPSFHGLKEDD------MGMSMSSP--LMWDRGLQSLNFQGMGVNP---WMQP---R 425
Query: 675 LNSSGLRDLSDESNNQSGIYSCLNIDVSNGGSTMIDHSVSSAILDEFCTLKDANFQNP-- 732
L++SGL + Q+ +Y + ID + ++A L +F + Q+P
Sbjct: 426 LDTSGLLGM------QNDVYQAMAAAALQD-MRGIDPAKAAASLLQFQNSPGFSMQSPSL 478
Query: 733 --PDCLMNTFSSSQDVQSQ 749
P L S Q SQ
Sbjct: 479 VQPQMLQQQLSQQQQQLSQ 497
Score = 45 (20.9 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 487 PEKPHP-PSKCEKQAPPGMNTDHLKSEPRQSIEQSSNL 523
P P P P + ++ PPG+ + H E + SS L
Sbjct: 365 PMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPL 402
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 998 (356.4 bits), Expect = 1.8e-147, Sum P(4) = 1.8e-147
Identities = 191/297 (64%), Positives = 235/297 (79%)
Query: 74 ADKDTDEIYAQMSLQPVNSE--KDVF-PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFS 130
AD +TDE+YAQM+LQP+ E K+ F PI + G+ PSK PS +FCKTLTASDTSTHGGFS
Sbjct: 85 ADVETDEVYAQMTLQPLTPEEQKETFVPI-ELGI-PSKQPSNYFCKTLTASDTSTHGGFS 142
Query: 131 VPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSK 190
VPRRAAEK+FPPLDYT+QPP QEL+ RDLHD W FRHI+RGQPKRHLLTTGWS+FV +K
Sbjct: 143 VPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 202
Query: 191 RLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQF 250
RL AGDSV+FIR+EK+QL +G+R A R QT +PSSVLS+DSMHIG+L + S F
Sbjct: 203 RLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCF 262
Query: 251 TIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLD 310
T+F++PRA S+FVI L+KY K+V+ T++SVGMRF M+FETEES RRYMGTI GISDLD
Sbjct: 263 TVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLD 322
Query: 311 PLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTS-GLKRPFHSG 366
+RWP S WR+++V WDE ++Q RVS WEIE + ++PSL LKRP+H+G
Sbjct: 323 SVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHAG 379
Score = 278 (102.9 bits), Expect = 1.8e-147, Sum P(4) = 1.8e-147
Identities = 50/93 (53%), Positives = 69/93 (74%)
Query: 799 RTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDV 858
+ + KV K+GSVGRS+D++ F +Y EL + +MF +EGLL DP + W+LV+VD END+
Sbjct: 705 KNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDI 764
Query: 859 LLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEG 891
LL+GDDPWE FV V I+ILSP++V QM + G
Sbjct: 765 LLLGDDPWESFVNNVWYIKILSPEDVHQMGDHG 797
Score = 158 (60.7 bits), Expect = 1.8e-147, Sum P(4) = 1.8e-147
Identities = 31/49 (63%), Positives = 34/49 (69%)
Query: 32 QDQSGARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDE 80
Q G K +NSELWHACAGPLV LP GS V YFPQGHSEQ T++
Sbjct: 11 QGHEG-EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 58
Score = 54 (24.1 bits), Expect = 1.8e-147, Sum P(4) = 1.8e-147
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 730 QNPP-DCLMNTFSSSQDVQSQITSASLADSQAFSRQDFPDNSG--GTSSSNVDFDESSLL 786
Q P + +N F Q S S +F + DF D+S T++S D + L
Sbjct: 527 QQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPASGDGNLLN 586
Query: 787 QNTSWQPVVPPMRT 800
+ + Q V+P T
Sbjct: 587 FSITGQSVLPEQLT 600
Score = 51 (23.0 bits), Expect = 3.6e-147, Sum P(4) = 3.6e-147
Identities = 53/254 (20%), Positives = 101/254 (39%)
Query: 512 EPR-QSIEQSSNLTSAADCSMEKPSGPLNPQNLVNQHAFHNQNEGLLQLQSSWPMQSQLE 570
EP Q ++QS++ S D +++ Q ++H H Q + + + M+ ++
Sbjct: 464 EPHHQYLQQSASHNS--DLMLQQQQ-----QQQASRHLMHAQTQIMSENLPQQNMRQEVS 516
Query: 571 SVFQAQQINVPQSDSTAHSGSLPILD--TDEWMSHTSCNSLAGTYNRSPGPLPMFGLQ-E 627
+ QQ + Q D A+ + + + +W + S + + F
Sbjct: 517 NQPAGQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTAS 576
Query: 628 PSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSPVDPLTSFTQQDHCSLNSS--GLRDLSD 685
P++ ++N S++ GQ + QL + P S T + SL + G + L+
Sbjct: 577 PASGDGNLLNFSIT--GQSVLPEQLTTEGW----SPKASNTFSEPLSLPQAYPG-KSLAL 629
Query: 686 ESNNQSGIYSCLNIDVSNG---GSTMIDHSVSSAILDEF-CTLKDANFQNPP-DCLMNTF 740
E N S +D +G ST+ + SS + +L D+ FQN C+ +T
Sbjct: 630 EPGNPQNP-SLFGVDPDSGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTT 688
Query: 741 SSSQDVQSQITSAS 754
QI S++
Sbjct: 689 HELLHGAGQINSSN 702
Score = 42 (19.8 bits), Expect = 4.0e-118, Sum P(3) = 4.0e-118
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 644 GQEMWDHQLNNLRFLSPVDPLTSFTQQDHCSLNSSGL 680
G + W+ +NN+ ++ + P DH S GL
Sbjct: 768 GDDPWESFVNNVWYIKILSPEDVHQMGDHGE-GSGGL 803
Score = 42 (19.8 bits), Expect = 1.4e-32, Sum P(4) = 1.4e-32
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 449 QKPRLVPSEMNRIDNQNCSQIC--LNQADTVNSSLSRINIP----EKPHPPSKCEKQAP 501
QK VP E+ Q + C L +DT S+ ++P EK PP Q P
Sbjct: 106 QKETFVPIELGIPSKQPSNYFCKTLTASDT--STHGGFSVPRRAAEKVFPPLDYTLQPP 162
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 793 (284.2 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 164/340 (48%), Positives = 217/340 (63%)
Query: 73 QADKDTDEIYAQMSLQP-VNSEKDVF----PIPDFGLKPSKHPSEFFCKTLTASDTSTHG 127
+A+ DTDE+YAQ++L P N +++ P+P P + FCKTLTASDTSTHG
Sbjct: 122 KAEADTDEVYAQITLLPEANQDENAIEKEAPLPP----PPRFQVHSFCKTLTASDTSTHG 177
Query: 128 GFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 187
GFSV RR A++ PPLD + QPPTQELV +DLH N W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 188 GSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNR 247
SKRL AGD+ +F+R E +L VGVRRA RQQ +PSSV+S+ SMH+GVL S
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 248 SQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGIS 307
+ FT++Y PR PS+F++P +Y +SV S+GMRF M FE EE+ ++R+ GTIVGI
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNY-SIGMRFKMRFEGEEAPEQRFTGTIVGIE 356
Query: 308 DLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE---TPESLFIFPSLTSGLKRPFH 364
+ DP RWP SKWR+L+V WDE + RVSPW++E P +L P KRP
Sbjct: 357 ESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRP--KRP-R 413
Query: 365 SGILATETEWGSLIKRPLACPEIAPGVMPYSSISNLCSEQ 404
S I + + L + + P +P S +S + Q
Sbjct: 414 SNIAPSSPDSSMLTREGTTKANMDP--LPASGLSRVLQGQ 451
Score = 242 (90.2 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 57/159 (35%), Positives = 90/159 (56%)
Query: 737 MNTFSSSQDVQSQITSAS-LADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPV- 794
MN S+ ++ + A+ L + QD D S G+ S+N ++ Q + P
Sbjct: 665 MNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKD 724
Query: 795 ----VPPMRTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKL 849
R+ TKV K G ++GRS+D++ F+NY+EL + ++R+F G L P+ +W +
Sbjct: 725 AQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLI 783
Query: 850 VYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMS 888
VY D END++LVGDDPW+EF VR I I + +EV +M+
Sbjct: 784 VYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
Score = 136 (52.9 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 40 AINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQ-MSLQPVNSE 93
A+ ELWHACAGPLV +P+ V+YFPQGH EQ + T++ Q M L + S+
Sbjct: 57 ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSK 111
Score = 45 (20.9 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 576 QQINVPQSDSTAHSGSLPILDTDEW 600
QQ NVP S ++HS L +L T W
Sbjct: 268 QQGNVPSSVISSHSMHLGVLAT-AW 291
Score = 39 (18.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/94 (19%), Positives = 41/94 (43%)
Query: 352 FPSLTSGLKR--PFHSGILATETEWGSLIKRPLACPEIAPGVMPYSSISNLCSEQLIKMM 409
+ L + L R F+ ++A + +W ++ + G P+ C + I +
Sbjct: 757 YEELVAELDRLFEFNGELMAPKKDW-LIVYTDEENDMMLVGDDPWQEFC--CMVRKIFIY 813
Query: 410 LKPQLVN-NPGSFAASSLQETSGAKGAHLEEVKT 442
K ++ NPG+ + S +E +G+ ++ K+
Sbjct: 814 TKEEVRKMNPGTLSCRSEEEAVVGEGSDAKDAKS 847
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 749 (268.7 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 158/319 (49%), Positives = 202/319 (63%)
Query: 74 ADKDTDEIYAQMSLQPV------NSE-KDVFPIPDF----GLKPSKHPSEFFCKTLTASD 122
A+KDTDE+Y Q++L P+ N E K+V + G K FCKTLTASD
Sbjct: 126 ANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTASD 185
Query: 123 TSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG 182
TSTHGGFSVPRRAAE F PLDY Q P+QEL+ +DLH W FRHIYRGQP+RHLLTTG
Sbjct: 186 TSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTG 245
Query: 183 WSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXX 242
WS+FV K L +GD+VLF+RDE +L +G+RRA R + LP S++ +S +L
Sbjct: 246 WSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NILSLVAN 304
Query: 243 XXSNRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGT 302
S +S F +FY+PRA ++FVIP KY S+ + + +G RF M FE ++S +RR G
Sbjct: 305 AVSTKSMFHVFYSPRATHAEFVIPYEKYITSIR-SPVCIGTRFRMRFEMDDSPERRCAGV 363
Query: 303 IVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTSGL-KR 361
+ G+ DLDP RWP SKWR L V WDE SD Q+RVSPWEI+ SL +S KR
Sbjct: 364 VTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKR 423
Query: 362 PFHSGILATETEWGSLIKR 380
P+ +G+L T + KR
Sbjct: 424 PW-AGLLDTTPPGNPITKR 441
Score = 239 (89.2 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 50/133 (37%), Positives = 77/133 (57%)
Query: 769 NSGGTSSSNVDFDESSLLQNTSWQPVVPPMRTYTKVQKTGS-VGRSIDVTNFKNYDELCS 827
N +S + F S ++ + +P R TKV K GS VGR+ID++ YD+L
Sbjct: 636 NMNASSGCKL-FGFSLPVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLM 694
Query: 828 AIERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQM 887
+ER+F +EGLL DP W+++Y D END+++VGDDPW +F V I + + +EVE
Sbjct: 695 ELERLFNMEGLLRDPE-KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENA 753
Query: 888 SEEGMKLLNSAAM 900
+++ L AA+
Sbjct: 754 NDDNKSCLEQAAL 766
Score = 145 (56.1 bits), Expect = 2.8e-111, Sum P(3) = 2.8e-111
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 7 KIKAGGLVIRAQTTXXXXXXXXXXXQDQSGARKAINSELWHACAGPLVFLPQVGSLVYYF 66
+I G L I + ++ +G+ +I SELWHACAGPL LP+ G++V YF
Sbjct: 29 RIDKGRLGI-SPSSSSSCSSGSSSSSSSTGSASSIYSELWHACAGPLTCLPKKGNVVVYF 87
Query: 67 PQGHSEQ 73
PQGH EQ
Sbjct: 88 PQGHLEQ 94
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 734 (263.4 bits), Expect = 1.7e-107, Sum P(3) = 1.7e-107
Identities = 157/332 (47%), Positives = 211/332 (63%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLK-PSKHPSEFFCKTLTASDTSTHGGFSV 131
+A+ +TDE+YAQ++L P + + PD ++ P K FCKTLTASDTSTHGGFSV
Sbjct: 83 RAEPETDEVYAQITLLPELDQSEPTS-PDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSV 141
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
RR A+ PPLD + QPP QELV DLH++ W FRHI+RGQP+RHLLTTGWS+FV SK+
Sbjct: 142 LRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKK 201
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L AGD+ +F+R E +L VGVRR RQQT +PSSV+S+ SMHIGVL + + F+
Sbjct: 202 LVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFS 261
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQ-MSVGMRFGMMFETEESGKRRYMGTIVGISDLD 310
+FY PR S+F++ + +Y ++ TQ +SVGMRF M FE EE+ ++R+ GTIVG+ +
Sbjct: 262 VFYKPRTSRSEFIVSVNRYLEAK--TQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENK 319
Query: 311 PLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE------TPESLFIFPSLTS-----GL 359
W S+WR+L+V+WDEP + +RVSPWE+E TP S P GL
Sbjct: 320 SSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGL 379
Query: 360 KRPFH--SGILATETEWGSLIKRPLACPEIAP 389
P SG + + W S P + P +P
Sbjct: 380 PSPATGPSGPVTPDGVWKSPADTPSSVPLFSP 411
Score = 226 (84.6 bits), Expect = 1.7e-107, Sum P(3) = 1.7e-107
Identities = 59/161 (36%), Positives = 93/161 (57%)
Query: 744 QDVQS-QITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRTYT 802
Q V S + S ++ ++ D P SG S++ + S Q+ +R+ T
Sbjct: 495 QPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQES--QSRQ-------IRSCT 545
Query: 803 KVQKTGS-VGRSIDVTNFKNYDELCSAIERMFGLEG-LLNDPRGTEWKLVYVDYENDVLL 860
KV GS VGR+ID+T + Y++L +E MF ++G LL + +W++VY D E+D+++
Sbjct: 546 KVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTK--KWQVVYTDDEDDMMM 603
Query: 861 VGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNSAAMQ 901
VGDDPW EF G VR I I +P+EV+++S + KL +A MQ
Sbjct: 604 VGDDPWNEFCGMVRKIFIYTPEEVKKLSPKN-KLAVNARMQ 643
Score = 137 (53.3 bits), Expect = 1.7e-107, Sum P(3) = 1.7e-107
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 40 AINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQAD 75
A+ ELWHACAGPLV LP+ G VYYFP+GH EQ +
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLE 53
Score = 45 (20.9 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 21/106 (19%), Positives = 40/106 (37%)
Query: 489 KPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKP--SGPLNPQNLVNQ 546
+P PP + ++ PPG+ + + P + S AD P S P
Sbjct: 364 QPQPPQRNKRPRPPGLPSP--ATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATF--G 419
Query: 547 HAFHNQNEGLLQLQSSWPMQSQLESVFQAQQINVPQSDSTAHSGSL 592
H N++ G+ + WP + + A N ++ +G++
Sbjct: 420 HG-GNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNV 464
Score = 44 (20.5 bits), Expect = 4.3e-24, Sum P(3) = 4.3e-24
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 576 QQINVPQSDSTAHSGSLPILDT 597
QQ N+P S ++HS + +L T
Sbjct: 228 QQTNIPSSVISSHSMHIGVLAT 249
Score = 41 (19.5 bits), Expect = 4.7e-88, Sum P(3) = 4.7e-88
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 564 PMQS-QLESVFQAQQINVPQSDSTAHSG 590
P+ S + +S Q++ +N+ QSD + SG
Sbjct: 496 PVPSNEFDSGQQSEPLNINQSDIPSGSG 523
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 700 (251.5 bits), Expect = 3.8e-102, Sum P(4) = 3.8e-102
Identities = 139/273 (50%), Positives = 181/273 (66%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVP 132
+A+ +TDE+YAQ++LQP + + + + P+K F K LTASDTSTHGGFSV
Sbjct: 87 KAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVL 146
Query: 133 RRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 192
R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 147 RKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRL 206
Query: 193 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFTI 252
AGD+ +F+R E L VGVRR R Q+ +P+SV+S+ SMH+GVL + F +
Sbjct: 207 VAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVV 266
Query: 253 FYNPRACPSDFVIPLAKYRKSV-YGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
FY PR S F++ + KY +++ +G S+G RF M FE EES +R + GTIVG DL
Sbjct: 267 FYKPRI--SQFIVGVNKYMEAIKHG--FSLGTRFRMRFEGEESPERIFTGTIVGSGDLSS 322
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
+WP SKWR+LQV+WDEP + +VSPWEIE
Sbjct: 323 -QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE 354
Score = 190 (71.9 bits), Expect = 3.8e-102, Sum P(4) = 3.8e-102
Identities = 42/100 (42%), Positives = 64/100 (64%)
Query: 799 RTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYEND 857
R+ TKVQ G +VGR++D+T K+YDEL +E MF ++G L +W +V+ D E D
Sbjct: 489 RSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEGD 546
Query: 858 VLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNS 897
++L GDDPW EF + I I S EV++M+ + +K+ +S
Sbjct: 547 MMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTK-LKISSS 585
Score = 119 (46.9 bits), Expect = 3.8e-102, Sum P(4) = 3.8e-102
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 43 SELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPVNSEK-DVFPIP 100
+ELW CAGPLV +P+ V+YFPQGH EQ T+ Q +NSE+ VF +P
Sbjct: 24 TELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTN--------QGINSEEIPVFDLP 74
Score = 47 (21.6 bits), Expect = 3.8e-102, Sum P(4) = 3.8e-102
Identities = 16/72 (22%), Positives = 28/72 (38%)
Query: 487 PEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKPSGPLNPQNLVNQ 546
PE P PP+ C + G + P +Q + AA C ++P P + Q
Sbjct: 429 PETPPPPTNCSYRLF-GFDLTSNSPAPIPQDKQPMDTCGAAKC--QEPITPTSMSEQKKQ 485
Query: 547 HAFHNQNEGLLQ 558
++ + +Q
Sbjct: 486 QTSRSRTKVQMQ 497
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 701 (251.8 bits), Expect = 5.5e-99, Sum P(3) = 5.5e-99
Identities = 139/284 (48%), Positives = 188/284 (66%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVP 132
+A+ +TDE+YAQ++LQP + + + ++P+K + F K LTASDTSTHGGFSV
Sbjct: 104 KAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVL 163
Query: 133 RRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 192
R+ A + P LD T PTQELV RDLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 164 RKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 223
Query: 193 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFTI 252
AGD+ +F+R E L VGVRR +QQ+ +P+SV+S+ SM +GVL + + F +
Sbjct: 224 VAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVV 283
Query: 253 FYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDPL 312
FY PR S F+I + KY ++ S+GMR+ M FE EES +R + GTI+G DL
Sbjct: 284 FYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRMRFEGEESPERIFTGTIIGSGDLSS- 339
Query: 313 RWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE--TPESLFIFPS 354
+WP SKWR+LQ++WDEP + +VSPWEIE +P +L P+
Sbjct: 340 QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 383
Score = 190 (71.9 bits), Expect = 5.5e-99, Sum P(3) = 5.5e-99
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 776 SNVDFDESSLLQ--NTSWQPVVPPMRTYT----KVQKTGS-VGRSIDVTNFKNYDELCSA 828
SN+ D ++ Q N+S P +T T KVQ G+ VGR++D+T ++YDEL
Sbjct: 483 SNIS-DSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKE 541
Query: 829 IERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMS 888
+E+MF +EG L+ P+ +W +V+ D E D +LVGDDPW EF + + I EV++M
Sbjct: 542 LEKMFEIEGELS-PKD-KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMR 599
Query: 889 EEGM 892
+ +
Sbjct: 600 SKSL 603
Score = 125 (49.1 bits), Expect = 5.5e-99, Sum P(3) = 5.5e-99
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 43 SELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDE 80
+ELW ACAGPLV +P+ G V+YFPQGH EQ T++
Sbjct: 41 TELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQ 78
Score = 51 (23.0 bits), Expect = 2.2e-84, Sum P(3) = 2.2e-84
Identities = 43/154 (27%), Positives = 64/154 (41%)
Query: 616 SPGPLPMFGLQEPSTMLPEVI-NP-SLSFPGQEMWDHQLN-NLRFLSPVDPLTSFTQQDH 672
+P P + S + E+ +P + SF H+ N +++ L DP T + +
Sbjct: 379 TPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESNPSVKLLFQ-DPATE--RNSN 435
Query: 673 CSLNSSGLRDLSDESNNQSGIYSC--LNIDV-SNGGSTMIDH-----SVSSAILDEFCTL 724
S+ SSGL+ E+ S SC D+ S S I H SV S I D
Sbjct: 436 KSVFSSGLQCKITEAPVTS---SCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKC 492
Query: 725 KDANFQNPP-DCLMNTFSSSQ-DVQSQITSASLA 756
+D N N P + T + S+ VQ Q T+ A
Sbjct: 493 QDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRA 526
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 773 (277.2 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 206/554 (37%), Positives = 294/554 (53%)
Query: 71 SEQADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPS-EFFCKTLTASDTSTHGGF 129
S QA+KDTDE+YAQ++L PV +E D PD + P F K LTASDTSTHGGF
Sbjct: 72 SLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGF 131
Query: 130 SVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGS 189
SV R+ A + PPLD T Q PTQELV D+H W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 132 SVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTS 191
Query: 190 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQ 249
KRL AGD+ +F+R E +L VGVRRAN QQ+++PSSV+S+ SMH+GVL ++
Sbjct: 192 KRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTM 251
Query: 250 FTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDL 309
F ++Y PR S F+I L KY +++ + SVGMRF M FE E+S +RRY GT++G+ D
Sbjct: 252 FIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDC 308
Query: 310 DPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIET-PESLFIFPSLTSGLKRP------ 362
P W SKWR L+V WDEP + +VSPWEIE S + S+ KRP
Sbjct: 309 SP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPRQVSEV 367
Query: 363 --FHSGILATETEWGSLIKRPLACPEIAPGVMPYS-SISNLCSEQLIKMMLKPQLVNNPG 419
GI A+ W S++ +P E A + S C + K +NN
Sbjct: 368 SALDVGITASNL-WSSVLTQP---HEFAQSCITSQWSSPQQCHRDANEDAKKSDWLNN-- 421
Query: 420 SFAASSLQETSGAKGAHLEEVKTLQSTINQK-PRLVPS-EMNRIDNQNCSQICLNQADTV 477
S++ S++ AK + L + + S + QK P + + ID + S + + + T
Sbjct: 422 SYSVSNV-----AKDSTLND--QMVSPVEQKKPETTANYRLFGIDLMS-SSLAVPEEKT- 472
Query: 478 NSSLSRINIPEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIE---QSSNLTSAADCSMEKP 534
+ + INI KP S + ++ ++ K EP + QS +S + +
Sbjct: 473 -APMRPINI-SKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQM 530
Query: 535 SG-PLNPQNLVNQHAFHNQNEGLLQLQSSWPMQSQLESVFQAQQINVPQSDSTAHSGSLP 593
G P+ V+ +A NE + ++ + ++ +L S Q + +D G +
Sbjct: 531 QGVPVG--RAVDLNALKGYNELIDDIEKLFDIKGELRS---RNQWEIVFTDD---EGDMM 582
Query: 594 ILDTDEWMSHTSCN 607
++ D W CN
Sbjct: 583 LVGDDPWPEF--CN 594
Score = 195 (73.7 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 40/91 (43%), Positives = 60/91 (65%)
Query: 799 RTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYEND 857
R+ TKVQ G VGR++D+ K Y+EL IE++F ++G L +W++V+ D E D
Sbjct: 523 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRN--QWEIVFTDDEGD 580
Query: 858 VLLVGDDPWEEFVGCVRCIRILSPQEVEQMS 888
++LVGDDPW EF V+ I I S +EV++M+
Sbjct: 581 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
Score = 129 (50.5 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 44 ELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPVNSEKDVFPIP 100
ELW CAGPLV +PQ VYYFPQGH EQ + T ++ +N+ K +F +P
Sbjct: 12 ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQV-------DLNTMKPLFVLP 61
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 513 PRQSIEQSSNLTSAADCSMEKPSGPLNPQNLVN 545
P+ +EQ T D + KP L P+ L N
Sbjct: 35 PQGHMEQLEASTQQVDLNTMKPLFVLPPKILCN 67
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 596 (214.9 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 120/279 (43%), Positives = 173/279 (62%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSV 131
+ + ++DE YA+++L P ++ + V P + +P + F K LTASDTS HGGFSV
Sbjct: 88 KVENNSDETYAEITLMP-DTTQVVIPTQNQNQFRPLVNS---FTKVLTASDTSVHGGFSV 143
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
P++ A + PPLD + PTQE++ DLH N W FRHIYRG +RHLLT GW+ F SK+
Sbjct: 144 PKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKK 203
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L GD ++F+R E +L VG+RRA QQ +PSS++S +SM G++ N+ F
Sbjct: 204 LVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFI 263
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
+ Y PR+ S F++ K+ V + +VG RF M FE ++ +RR GTI+G+SD P
Sbjct: 264 VVYKPRS--SQFIVSYDKFL-DVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP 320
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE--TPES 348
W S+WR+L+V+WDE + +VSPW+IE TP S
Sbjct: 321 -HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWS 358
Score = 179 (68.1 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 43/121 (35%), Positives = 70/121 (57%)
Query: 780 FDESSLLQN-TSWQPV-VPPMRTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLE 836
F +S +L++ T Q RT TKVQ G ++GR++D++ YD+L +E++F L+
Sbjct: 489 FGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLK 548
Query: 837 GLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLN 896
G L +W++ + + E D +LVG+DPW EF V+ I I S +EV+ + K L+
Sbjct: 549 GQLQ--ARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSR--KSLS 604
Query: 897 S 897
S
Sbjct: 605 S 605
Score = 126 (49.4 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPV 90
G++ + +LW CAGPL +P++G VYYFPQGH E + T E + LQP+
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNE--LQPI 71
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 602 (217.0 bits), Expect = 4.5e-83, Sum P(3) = 4.5e-83
Identities = 121/273 (44%), Positives = 171/273 (62%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSV 131
+ + ++DE YA+++L P ++ + V P + +P + F K LTASDTS GGF V
Sbjct: 88 KVENNSDETYAEITLMP-DTTQVVIPTQNENQFRPLVNS---FTKVLTASDTS--GGFFV 141
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
P++ A + PPLD + PTQEL+ DLH N W F H YRG P+RHLLTTGW+ F SK+
Sbjct: 142 PKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKK 201
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L AGD ++F+R E +L VG+RRA QQ +PSS++S +SM GV+ N+ F
Sbjct: 202 LVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFI 261
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
+ Y PR+ S F++ K+ +V + +VG RF M FE ++ +RRY GTI+G+SD P
Sbjct: 262 VVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSP 318
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
W S+WRNL+V+WDE + +VSPWEIE
Sbjct: 319 -HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIE 350
Score = 159 (61.0 bits), Expect = 4.5e-83, Sum P(3) = 4.5e-83
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 799 RTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYEND 857
RT TKVQ G ++ R++D++ YD+L +E +F L+G L +W++ + D ++D
Sbjct: 509 RTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRN--QWEIAFTDSDDD 566
Query: 858 VLLVGDDPWEEFVGCVRCIRI 878
+LVGDDPW EF V+ I I
Sbjct: 567 KMLVGDDPWPEFCNMVKKILI 587
Score = 114 (45.2 bits), Expect = 4.5e-83, Sum P(3) = 4.5e-83
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDE 80
G++ + +LW CAGPL +P++G +YYFPQG+ E + T E
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTRE 63
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 583 (210.3 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 118/273 (43%), Positives = 168/273 (61%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSV 131
+ + ++DE YA+++L P ++ + V P + +P + F K LTASDTS HGGF V
Sbjct: 88 KVENNSDETYAEITLMP-DTTQVVIPTQNENQFRPLVNS---FTKVLTASDTSAHGGFFV 143
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
P++ A + P LD + P QEL+ DLH N W F H YRG P+RHLLTTGW+ F SK+
Sbjct: 144 PKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKK 203
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L AGD ++F+R E +L VG+RRA QQ +PSS++S D M GV+ N+ FT
Sbjct: 204 LVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFT 263
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
+ Y PR+ S F++ K+ +V + +VG RF M E ++ +RR GTI+G+SD P
Sbjct: 264 VVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSP 320
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
W S+WR+L+V+WDE K+VSPW+IE
Sbjct: 321 -HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIE 352
Score = 165 (63.1 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 799 RTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYEND 857
RT TKVQ G ++GR++D++ YD+L +E++F ++G L +W++ + D + D
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRN--QWEIAFTDSDED 568
Query: 858 VLLVGDDPWEEFVGCVRCIRI 878
+LVGDDPW EF V+ I I
Sbjct: 569 KMLVGDDPWPEFCNMVKKIFI 589
Score = 128 (50.1 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPV 90
G++ + +LW CAGPL +P++G VYYFPQGH E + T E + LQP+
Sbjct: 19 GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNE--LQPI 71
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 704 (252.9 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 164/354 (46%), Positives = 210/354 (59%)
Query: 74 ADKDTDEIYAQMSLQPVNSE------KDVFPIP----DFG-LKPSKHPSEFFCKTLTASD 122
A+ TDE+YAQ+SL P + + + + + D+ LK S P FCKTLTASD
Sbjct: 109 AETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTP-HMFCKTLTASD 167
Query: 123 TSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG 182
TSTHGGFSVPRRAAE FPPLDY+ P+QEL+ RDLH W FRHIYRGQP+RHLLTTG
Sbjct: 168 TSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTG 227
Query: 183 WSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXX 242
WS FV K+L +GD+VLF+R + +L +GVRRA++ + S +M+
Sbjct: 228 WSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAH 287
Query: 243 XXSNRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGT 302
S S F+I YNP+A S+F+IP K+ K V +GMRF E+E++ +RR G
Sbjct: 288 AISTHSVFSISYNPKASWSNFIIPAPKFLK-VVDYPFCIGMRFKARVESEDASERRSPGI 346
Query: 303 IVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPS-LTSGLKR 361
I GISDLDP+RWPGSKWR L V WD+ + Q+RVSPWEIE S+ S +T+G KR
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKR 406
Query: 362 ------------PFHSGILATETEWGSLIKRPLACPEIAPGVMPYSSISNLCSE 403
P GI AT+ E +R L EI PG + N CS+
Sbjct: 407 SRIGFSSGKPDIPVSEGIRATDFEESLRFQRVLQGQEIFPGFI------NTCSD 454
Score = 144 (55.7 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 27/39 (69%), Positives = 30/39 (76%)
Query: 44 ELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIY 82
ELWHACAGPL+ LP+ GSLV YFPQGH EQA + IY
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAIY 92
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 608 (219.1 bits), Expect = 2.6e-75, Sum P(2) = 2.6e-75
Identities = 120/273 (43%), Positives = 172/273 (63%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSV 131
+ + ++DEIYA+++L P ++ + V P +P + F K LTASDTS +GGFSV
Sbjct: 88 KVENNSDEIYAEITLMP-DTTQVVIPTQSENRFRPLVNS---FTKVLTASDTSAYGGFSV 143
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
P++ A + PPLD + P QE++ DLHDN W FRH YRG P+RH LTTGW+ F+ SK+
Sbjct: 144 PKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKK 203
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L GD ++F+R E +L VG+RRA QQ +PSS++S D M GV+ N+ F
Sbjct: 204 LVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFI 263
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
+ Y PR+ S F++ K+ +V + +VG RF M FE ++ +RRY GTI+G+SD P
Sbjct: 264 VVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSP 320
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
W S+WR+L+V+WDE + +VSPWEIE
Sbjct: 321 -HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
Score = 176 (67.0 bits), Expect = 2.6e-75, Sum P(2) = 2.6e-75
Identities = 38/100 (38%), Positives = 60/100 (60%)
Query: 799 RTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYEND 857
RT TKVQ G ++GR++D++ YD+L +E++F ++G L +WK+ + D +
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRN--QWKIAFTDSDGY 568
Query: 858 VLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNS 897
+LVGDDPW EF V+ I I S +EV+ + K L+S
Sbjct: 569 EMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSS--KSLSS 606
Score = 119 (46.9 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 34/110 (30%), Positives = 52/110 (47%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPVNS--E 93
G++ + +LW CAGPL +P++G VYYFPQG+ E T E + LQP+
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNE--LQPICDLPS 76
Query: 94 KDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPL 143
K + LK + E + + DT+ +P ++ E F PL
Sbjct: 77 KLQCRVIAIHLKVENNSDEIYAEITLMPDTTQ---VVIPTQS-ENRFRPL 122
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 566 (204.3 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 114/273 (41%), Positives = 164/273 (60%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSV 131
+ + ++DE YA+++L P ++ + V P +P + F K LTASDTS +GGF V
Sbjct: 88 KVENNSDETYAEITLMP-DTTQVVIPTQSENQFRPLVNS---FTKVLTASDTSAYGGFFV 143
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
P++ A + PPL P QEL+ +DLH N W FRH YRG P+RH LTTGW+ F SK+
Sbjct: 144 PKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKK 199
Query: 192 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFT 251
L GD ++F+R E +L VG+RRA QQ +PSS++S D M GV+ N+ F
Sbjct: 200 LVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFI 259
Query: 252 IFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDP 311
+ Y P S F++ K+ ++ + VG RF M FE ++ +RRY GTI+G++D P
Sbjct: 260 VVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDFSP 318
Query: 312 LRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
W S+WR+L+V+WDE + +VSPWEIE
Sbjct: 319 -HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 350
Score = 178 (67.7 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 799 RTYTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYEND 857
RT TKVQ G ++GR++D++ YD+L +E++F L+G L +WK+ + D +
Sbjct: 495 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRN--QWKIAFTDSDGY 552
Query: 858 VLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGMKLLNS 897
+LVGDDPW EF V+ I I S +EV+ + K L+S
Sbjct: 553 EMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSS--KSLSS 590
Score = 123 (48.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPVNS--E 93
G++ + +LW CAGPL +P++G VYYFPQG+ E D T E + LQP+
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNE--LQPICDLPS 76
Query: 94 KDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPL 143
K + LK + E + + DT+ +P ++ E F PL
Sbjct: 77 KLQCRVIAIHLKVENNSDETYAEITLMPDTTQ---VVIPTQS-ENQFRPL 122
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 381 (139.2 bits), Expect = 1.4e-65, Sum P(4) = 1.4e-65
Identities = 77/187 (41%), Positives = 110/187 (58%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVP 132
+ DK+TDE+YAQ+SL P +E +P + FF K LTASD S GG +P
Sbjct: 86 KVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRPIVY---FFSKILTASDVSLSGGLIIP 142
Query: 133 RRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTG--WSLFVGSK 190
++ A + FPPLD + TQ LV +DL+ W+F+H++RG P+RH+ T+G WS+F +K
Sbjct: 143 KQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTK 202
Query: 191 RLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQF 250
RL GD + +R E +L G+RRA QQ +PSSV+SA+ M GV+ + F
Sbjct: 203 RLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMF 262
Query: 251 TIFYNPR 257
+ Y PR
Sbjct: 263 NVVYKPR 269
Score = 153 (58.9 bits), Expect = 1.4e-65, Sum P(4) = 1.4e-65
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 287 MMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETP 346
M FE ++ ++RY GTI+G++D+ P W S+WR+L+V+WDE + +VSPW+IE
Sbjct: 270 MQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE-- 326
Query: 347 ESLFIFPSLT---SGLKRPFHSGILATETEWGSLIKRPLACPEI 387
+ PS S LK+ H L E G+ + C EI
Sbjct: 327 ---HLIPSSDISQSSLKKKKHWLQL---NEIGATLSNLWTCQEI 364
Score = 148 (57.2 bits), Expect = 1.4e-65, Sum P(4) = 1.4e-65
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 802 TKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVLL 860
TKV G ++ R++D+T Y++L +E +F L+ L +W++V+ + E +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRN--QWEIVFTNNEGAEML 493
Query: 861 VGDDPWEEFVGCVRCIRILSPQEVEQM 887
VGDDPW EF + I I S +E+++M
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKM 520
Score = 119 (46.9 bits), Expect = 1.4e-65, Sum P(4) = 1.4e-65
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 44 ELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDT-DEI 81
+LW+ CAGPL LP+ G VYYFPQGH E + T DE+
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDEL 63
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 397 (144.8 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 83/180 (46%), Positives = 109/180 (60%)
Query: 47 HACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPV-NSEKDVFPIPDFGLK 105
HA A P P+V L+ AD +TDE++A+++L P+ ++ D+ GL
Sbjct: 39 HAHAPPDFHAPRVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLT 98
Query: 106 P--------SKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVR 157
P K F KTLT SD + GGFSVPR AE +FP LDY+ +PP Q ++ +
Sbjct: 99 PPSSDGNGNGKEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAK 158
Query: 158 DLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 217
D+H TW FRHIYRG P+RHLLTTGWS FV K+L AGDS++F+R E L VG+RRA R
Sbjct: 159 DIHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 218
Score = 221 (82.9 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 48/146 (32%), Positives = 70/146 (47%)
Query: 200 FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXSNRSQFTIFYNPRAC 259
F+RD++S ++ + + + + + + F + Y PRA
Sbjct: 237 FLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRAS 296
Query: 260 PSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRR-YMGTIVGISDLDPLRWPGSK 318
+F + A R S + GMRF M FETE+S + +MGT+ + DP+RWP S
Sbjct: 297 TPEFCVKAADVR-SAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 355
Query: 319 WRNLQVEWDEPGCSDKQKRVSPWEIE 344
WR LQV WDEP KRVSPW +E
Sbjct: 356 WRLLQVAWDEPDLLQNVKRVSPWLVE 381
Score = 121 (47.7 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 39 KAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTD 79
K+++ +LWHACAG +V +P + S V+YF QGH+E A D
Sbjct: 5 KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPD 45
Score = 81 (33.6 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 26/126 (20%), Positives = 59/126 (46%)
Query: 755 LADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRT-YTKV-QKTGSVGR 812
L + Q +R+ F + + + ++ + + +W + + T + KV ++ VGR
Sbjct: 540 LTEQQVMNRKRFLEEE-----AEAEEEKGLVARGLTWNYSLQGLETGHCKVFMESEDVGR 594
Query: 813 SIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGC 872
++D++ +Y EL + MF +E + +VY D + +GD+P+ +F+
Sbjct: 595 TLDLSVIGSYQELYRKLAEMFHIE----ERSDLLTHVVYRDANGVIKRIGDEPFSDFMKA 650
Query: 873 VRCIRI 878
+ + I
Sbjct: 651 TKRLTI 656
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 195 GDSVLFIRDEKSQLMVGVRRANRQQTAL--PSSVLSADSMHIGVLXXXXXXXSNRSQFTI 252
G+S+ ++ ++ + G++ A + Q PS L +D +++ S + F
Sbjct: 428 GESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSD-LNLSSYTGNNKLHSP-AMFLS 485
Query: 253 FYNPR 257
+NPR
Sbjct: 486 SFNPR 490
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 372 (136.0 bits), Expect = 2.2e-44, Sum P(3) = 2.2e-44
Identities = 72/149 (48%), Positives = 98/149 (65%)
Query: 74 ADKDTDEIYAQMSLQPVNSEKDV-FPIPDF----GLKPSKHPSEFFCKTLTASDTSTHGG 128
AD ++DE++A++ L P+ ++ V D G + + + F KTLT SD + GG
Sbjct: 75 ADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGGG 134
Query: 129 FSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVG 188
FSVPR AE +FP LDY +PP Q ++ +D+H + W FRHIYRG P+RHLLTTGWS FV
Sbjct: 135 FSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVN 194
Query: 189 SKRLRAGDSVLFIRDEKSQLMVGVRRANR 217
K+L AGDS++F+R E L VG+RRA R
Sbjct: 195 QKKLVAGDSIVFMRAENGDLCVGIRRAKR 223
Score = 232 (86.7 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 66/179 (36%), Positives = 89/179 (49%)
Query: 180 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXX 239
+ GW+ GS G S L DE + L RR+N V +A+S V+
Sbjct: 233 SAGWNPIGGS----CGYSSLLREDESNSL----RRSNCSLADRKGKV-TAES----VIEA 279
Query: 240 XXXXXSNRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRR- 298
S R F + Y PRA S+F + R ++ S GMRF M FETE+S +
Sbjct: 280 ATLAISGRP-FEVVYYPRASTSEFCVKALDARAAMRIPWCS-GMRFKMAFETEDSSRISW 337
Query: 299 YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIETPESLFIFPSLTS 357
+MGT+ ++ DP+RWP S WR LQV WDEP KRV+PW +E ++ P LTS
Sbjct: 338 FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP-LTS 395
Score = 131 (51.2 bits), Expect = 2.2e-44, Sum P(3) = 2.2e-44
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 34 QSGARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPV 90
+ G K ++ +LWHACAG +V +P + S V+YFPQGH+E A D + + + P+
Sbjct: 9 KGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD--FGNLPIPPM 63
Score = 85 (35.0 bits), Expect = 2.2e-44, Sum P(3) = 2.2e-44
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 801 YTKV-QKTGSVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVL 859
+ KV ++ VGR++D++ +Y+EL + MFG++ ++ + ++Y D +
Sbjct: 586 HCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKK--SEMLSS---VLYRDASGAIK 640
Query: 860 LVGDDPWEEFVGCVRCIRILSPQEVEQM 887
G++P+ EF+ R + IL+ Q E +
Sbjct: 641 YAGNEPFSEFLKTARRLTILTEQGSESV 668
Score = 45 (20.9 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 42/194 (21%), Positives = 79/194 (40%)
Query: 484 INIPEKPHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAADCSMEKPS----GPLN 539
+N P P PPS + G+ K+E + + T D +K G L
Sbjct: 468 LNRPPPPPPPSSLQLSPSLGLRNIDTKNE-KGFCFLTMGTTPCNDTKSKKSHIVLFGKLI 526
Query: 540 -PQNLVNQH-AFHNQNEGLLQLQSSWPMQSQLES-VFQAQQINVPQS----DSTA-HSGS 591
P+ +++ + N Q+ S Q+ + F + P S D++ +G
Sbjct: 527 LPEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGH 586
Query: 592 LPI-LDTDEWMSHTSCNSLAGTYNRSPGPLP-MFGLQEPSTMLPEVI----NPSLSFPGQ 645
+ +++D+ + T S+ G+Y L MFG+++ S ML V+ + ++ + G
Sbjct: 587 CKVFMESDD-VGRTLDLSVLGSYEELSRKLSDMFGIKK-SEMLSSVLYRDASGAIKYAGN 644
Query: 646 EMWDHQLNNLRFLS 659
E + L R L+
Sbjct: 645 EPFSEFLKTARRLT 658
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 341 (125.1 bits), Expect = 8.2e-39, Sum P(3) = 8.2e-39
Identities = 77/174 (44%), Positives = 101/174 (58%)
Query: 47 HACAGPLVF-LPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQPVNSEK----DVFPIPD 101
H C PL+ LP S V AD TDE++A + LQP+ ++ +
Sbjct: 48 HCC--PLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGR 105
Query: 102 F-GLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLH 160
F G + F K LT SD + GGFSVPR A+ +FP L++ + PP Q+L V D+H
Sbjct: 106 FDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIH 165
Query: 161 DNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRR 214
W FRHIYRG P+RHLLTTGWS FV SK+L AGDSV+F+R ++ +GVRR
Sbjct: 166 GAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRR 219
Score = 148 (57.2 bits), Expect = 8.2e-39, Sum P(3) = 8.2e-39
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 250 FTIFYNPRACPSDFVIPLAKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDL 309
F + + P A S+FV+ S+ + G R M ETE+S + + IV +
Sbjct: 284 FEVVFYPAAGWSEFVVRAEDVESSM-SMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQ 342
Query: 310 DPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
+ W GS W+ LQ+ WDEP KRV+PW++E
Sbjct: 343 ETGPWRGSPWKQLQITWDEPEILQNVKRVNPWQVE 377
Score = 98 (39.6 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 39 KAINSELWHACAGPLVFLPQVGSLVYYFPQGHSE 72
+ ++ +W ACAG V +P + S VYYFPQGH E
Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVE 47
Score = 43 (20.2 bits), Expect = 8.2e-39, Sum P(3) = 8.2e-39
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 490 PHPPSKCEKQAPPGMNTDHLKSEPRQSIEQSSNLTSAA 527
P PP+K K PG L + + + S L+SAA
Sbjct: 388 PFPPAKRLKYPQPGGG--FLSGDDGEILYPQSGLSSAA 423
Score = 37 (18.1 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 843 RGTEWKLVYVDYENDVLLVGD---DPWE 867
RG+ WK + + ++ +L +PW+
Sbjct: 348 RGSPWKQLQITWDEPEILQNVKRVNPWQ 375
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 258 (95.9 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 58/142 (40%), Positives = 83/142 (58%)
Query: 73 QADKDTDEIYAQMSLQPVNSEKDVFPIPDFG-LKPSKHPSEFFCKTLTASDTSTHGGFSV 131
+ + ++DE Y +++L P ++ + V P + +P + F K LTASDTS G FSV
Sbjct: 88 KVENNSDETYVEITLMP-DTTQVVIPTENENQFRPIVNS---FTKVLTASDTSAQGEFSV 143
Query: 132 PRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 191
P + A + PPLD + P QEL+ DLH N W F+H YR P+ TTGW+ F SK+
Sbjct: 144 PCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKK 200
Query: 192 LRAGDSVLFIRDEKSQLMVGVR 213
L GD ++F R E +L VG+R
Sbjct: 201 LVVGDVIVFARGETGELRVGIR 222
Score = 123 (48.4 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 36 GARKAINSELWHACAGPLVFLPQVGSLVYYFPQGHSEQADKDTDEIYAQMSLQP 89
G++ + +LW CAGPL +P++G VYYFPQGH E + T E + LQP
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNE--LQP 70
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 774 SSSNVDFDESSLLQNT--SWQPVVPPMRT-----YTKVQKTG-SVGRSIDVTNFKNYDEL 825
S N D+ + T W PV R Y KV+K G ++GR +D+ +YDEL
Sbjct: 60 SCCNTSDDDCRRRKKTVVGWPPVSSARRACGGANYVKVKKEGDAIGRKVDLALHSSYDEL 119
Query: 826 CSAIERMF------GLEGLLNDPRGTEWKLV--YVDYENDVLLVGDDPWEEFVGCVRCIR 877
+ + RMF G + + ND G V Y D + D +LVGD PW++F V+ ++
Sbjct: 120 AATLARMFPTNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLK 179
Query: 878 IL 879
IL
Sbjct: 180 IL 181
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 139 (54.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 801 YTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVL 859
Y K+ G +GR ++++ + NY +L A++++F + + R ++ LVY D E D +
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNR--QYTLVYEDTEGDKV 139
Query: 860 LVGDDPWEEFVGCVRCIRILSPQEVEQMS 888
LVGD PWE FV V+ + +L +S
Sbjct: 140 LVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 42/129 (32%), Positives = 62/129 (48%)
Query: 90 VNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQP 149
+N E PI + S F K +T SD +P++ AE+ FP + T
Sbjct: 1 MNQEDKEKPIEE--ASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTND 58
Query: 150 PTQELVVR--DLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDE--K 205
+ L++ D N+W FR+ Y + +++T GWS FV K+L AGD V F RD K
Sbjct: 59 SNKGLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNK 118
Query: 206 SQLMVGVRR 214
+L + RR
Sbjct: 119 DKLYIDWRR 127
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 152 (58.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/97 (42%), Positives = 54/97 (55%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFP-PLDYT---MQP-PTQELVVRDLHDNT---WT 165
F KT+T SD +P++ AEK FP P T M P PT+ +++ +L D T W
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLI-NLEDRTGKVWR 253
Query: 166 FRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 202
FR+ Y + ++LT GWS FV K LRAGD V F R
Sbjct: 254 FRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMF-----GLEGLLNDPRGTEWKLVYVDY 854
Y KV G+ R +D+ +KNY +L +A+E+MF G +GL + E+ L Y D
Sbjct: 153 YVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDK 212
Query: 855 ENDVLLVGDDPWEEFVGCVRCIRIL 879
+ D +LVGD PWE F R +RI+
Sbjct: 213 DGDWMLVGDVPWEMFANSCRRLRIM 237
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 150 (57.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 58/223 (26%), Positives = 94/223 (42%)
Query: 72 EQADKD---TDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGG 128
++ D+D T I A S P + ++ P+ + P F K +T SD
Sbjct: 15 QEQDRDQELTSNIGASSSSGPSGNNNNL-PMM---MIPPPEKEHMFDKVVTPSDVGKLNR 70
Query: 129 FSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVG 188
+P++ AE+ FP LD + L +D + W FR+ Y + +++T GWS FV
Sbjct: 71 LVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVK 129
Query: 189 SKRLRAGDSVLFIR---DEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLXXXXXXXS 245
K+L AGD V F R DE + + + +R +L + + S
Sbjct: 130 EKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQAH-QFGNFGFNFNFPTTSQYS 188
Query: 246 NRSQFTIFYNPRACPSDFVIPLAKYRKSVYGTQMS--VGMRFG 286
NR YN + P + + +++S Y TQ VG +G
Sbjct: 189 NRFHPLPEYN--SVPIHRGLNIGNHQRSYYNTQRQEFVGYGYG 229
Score = 45 (20.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 461 IDNQNC--SQ-ICLNQADTVNSSLSRINIPEKPHPPSKCEKQAPP-GMN----TDHLKSE 512
+D++N S+ + ++ V L+ + +P P PPS K+ G+N D+ + E
Sbjct: 242 LDHRNIVGSEPLVIDSVPVVPGRLTPVMLPPLPPPPSTAGKRLRLFGVNMECGNDYNQQE 301
Query: 513 -----PRQSIEQSSNLTSA 526
PR I SS+ +SA
Sbjct: 302 ESWLVPRGEIGASSSSSSA 320
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 85 MSLQPVNSEKDVFPIPDF-GLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPL 143
+SL E++ P+ + G + F K +T SD +P++ AE+ FP L
Sbjct: 5 LSLTRDEDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-L 63
Query: 144 DYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 202
D + L DL +W FR+ Y + +++T GWS FV K+L AGD V F R
Sbjct: 64 DSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 122
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 148 (57.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/102 (36%), Positives = 52/102 (50%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFP-PL-DYTMQPPTQELVVRDLHDNTWTFRHIYR 171
F KT+T SD +P+ AEK FP PL + + L D++ W FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 172 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR--DEKSQLMVG 211
+ ++LT GWS FV KRL AGD + F R D+ + +G
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIG 284
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 143 (55.4 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 37/96 (38%), Positives = 58/96 (60%)
Query: 250 FTIFYNPRACPSDFVIPLAKYRKSVYGTQMSV-GMRFGMMFETEESGKRRYMGTIVGISD 308
+T+ Y+ P D+++ +K RKS+ T +V RF M + SG Y GTI+ ISD
Sbjct: 1350 YTVIYHVSDIP-DYLVLASKVRKSML-TDWTVPNKRFRMFYPA--SGW--YNGTIIEISD 1403
Query: 309 LDPLRWPGSKWRNLQVEWDEPGCSDKQKRVSPWEIE 344
DPL +P S W N++V WD+ ++++ RV+ WEI+
Sbjct: 1404 SDPL-FPNSPWENIKVLWDD---TEEEDRVNYWEID 1435
Score = 65 (27.9 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 55 FLPQVGSLVYYFPQGHSEQADK 76
+ PQVG ++YF QGH++ +K
Sbjct: 1215 YSPQVGDFIFYFYQGHTKYLEK 1236
Score = 54 (24.1 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 33/158 (20%), Positives = 69/158 (43%)
Query: 666 SFTQQDHCSLNSSGLRDLSDESNNQSGIYSCLNIDVSNGGSTMIDHSVSS-AILDEFCTL 724
+F + +L+ SG+ D ++ +NN + + N+ N M++++ S+ + LD
Sbjct: 1542 NFNYNSNNNLSMSGILDYTNFNNNNNNFMN-YNMYQGNYNGMMMNNNTSNYSYLDP--NN 1598
Query: 725 KDANFQNPPDCLMNTFSSSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESS 784
+ Q P N+ +Q Q Q+ + + ++ +N T+ SN + S+
Sbjct: 1599 SNMYMQTYPQ---NSTMQNQQ-QPQLNNIYYNSQLQPTNYNYTNNFN-TNYSNFNNSSSN 1653
Query: 785 LLQ-NTSWQPVVPPMRTYTKVQKTGSVGRSIDVTNFKN 821
++ NT+ PP T T T + + + +N N
Sbjct: 1654 IMNYNTNNNFNSPP--TATTSNTTTTTTTTTETSNNNN 1689
Score = 50 (22.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 701 VSNGGSTMIDHSVSSAILDEFCT-LKDANFQNPPDCLMNTFSSSQDVQSQITSASLADSQ 759
V N +TM+ + S + LK+A P D L+ + S D T S+A +
Sbjct: 1797 VYNKPNTMVAKN-SKLVFHRISDILKEAANYTPSDILLQS-GGSFD---SFTLKSMAADK 1851
Query: 760 AFSRQDFPDNSGGTSSSNVDFDESSLLQNTS 790
S+ D D+S + +N D D+ L N +
Sbjct: 1852 DDSQLDDEDDSMVSGVTNDDDDDDDNLANNN 1882
Score = 37 (18.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 29/129 (22%), Positives = 42/129 (32%)
Query: 681 RDLSDESNNQS---GIYSCLNIDVSNGGSTMIDHSVSSAI---LDEFCTLKDANFQNPPD 734
R S++SN +S G N NGG + D D D + N D
Sbjct: 1970 RSRSNQSNEESDDDGFIDDNNSSHQNGGKILDDSDNDDKNQNGTDNDYNDDDDDDDNDGD 2029
Query: 735 CLMNTFSSSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPV 794
S ++ IT + F +D DN+ D+ E + S Q
Sbjct: 2030 STNKKRKSIKNQTEPITKRQRTNRLIFEDEDEDDNN--QEEDEEDYQEKPKPKPRSKQ-T 2086
Query: 795 VPPMRTYTK 803
P + T K
Sbjct: 2087 TPKVTTPRK 2095
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 133 (51.9 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGLE-GLLNDP---RGTEWKLVYVDYE 855
Y KV G+ R ID+T +K Y EL ++E MF G + +G+++ Y D +
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKD 149
Query: 856 NDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEGM 892
D +LVGD PWE FV + +RI+ EV+ + G+
Sbjct: 150 GDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGGL 186
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 36/100 (36%), Positives = 48/100 (48%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQ 173
F K +T SD +P+ AEK FP + L D++ W FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 174 PKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EKSQLMVG 211
+ ++LT GWS FV K LRAGD V F R + QL +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 125 (49.1 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 800 TYTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGLEGLLNDP-RGTEWKLVYVDYEND 857
+Y KV G+ R ID+ +K Y +L SA++ +FG +D + +E +Y D + D
Sbjct: 75 SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGD 134
Query: 858 VLLVGDDPWEEFVGCVRCIRIL 879
+L GD PWE F+G + +RI+
Sbjct: 135 WMLAGDVPWEMFLGSCKRLRIM 156
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 121 (47.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGLEGL-LNDPRGTEWK--LVYVDYEN 856
+ KV G+ R +DV + +Y EL A+ MF + L D G EW+ +VY D +
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYG-EWEHAVVYEDGDG 105
Query: 857 DVLLVGDDPWEEFVGCVRCIRILSPQEVEQMS 888
D +LVGD PWE FV + +R++ E +S
Sbjct: 106 DWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVR--DLHDNTWTFRHIYR 171
F K +T SD +P++ AEK FP L T+ +++ D++ W FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 172 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 202
+ ++LT GWS FV K LRAGD V F R
Sbjct: 247 NSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>UNIPROTKB|Q6H543 [details] [associations]
symbol:IAA7 "Auxin-responsive protein IAA7" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG303951 EMBL:AP005394 EMBL:AP005756 EMBL:AK121870
RefSeq:NP_001046357.1 UniGene:Os.7355
EnsemblPlants:LOC_Os02g13520.1 GeneID:4328796
KEGG:dosa:Os02t0228900-01 KEGG:osa:4328796 Gramene:Q6H543
OMA:QEDVAIS ProtClustDB:CLSN2692586 Uniprot:Q6H543
Length = 300
Score = 108 (43.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 835 LEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEV 884
+ GLL D G E+ LVY DYE D +LVGD PW FV V+ +R+L ++
Sbjct: 237 ISGLL-DGTG-EYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDL 284
Score = 77 (32.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 33/144 (22%), Positives = 60/144 (41%)
Query: 701 VSNGGSTMIDHSVSSAILDEFCTLKDANFQNPPDCLMNTFSSSQDVQSQITSASLADSQA 760
+S G ST++ HS A ++ ++ PP N +S+ + Q S S
Sbjct: 84 LSLGYSTLVSHSQGKANKNKGSP-EEEEAHPPPATGNNALASNNNGCFQTRSPSTPVVGW 142
Query: 761 FSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRTYTKVQKTG-SVGRSIDVTNF 819
+ F N +S ++++ P + K+ G +GR ID+ F
Sbjct: 143 PPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAP----FIKINMDGVPIGRKIDLNAF 198
Query: 820 KNYDELCSAIERMF-GLEGLLNDP 842
+Y++L A++++F GL DP
Sbjct: 199 DSYEKLSLAVDKLFRGLLAAQRDP 222
>UNIPROTKB|Q5NB25 [details] [associations]
symbol:IAA3 "Auxin-responsive protein IAA3" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AP001550 EMBL:AP001859 EMBL:AK104654
RefSeq:NP_001042495.1 UniGene:Os.12733
EnsemblPlants:LOC_Os01g13030.1 EnsemblPlants:LOC_Os01g13030.2
GeneID:4325890 KEGG:dosa:Os01t0231000-01 KEGG:osa:4325890
Gramene:Q5NB25 OMA:CHIVFRS Uniprot:Q5NB25
Length = 263
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 33/85 (38%), Positives = 46/85 (54%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMF-----GLEGLLNDPRGTEWKLVYVDY 854
Y KV G+ R +D+ +KNY ++ +E+MF G EG N G E+ L Y D
Sbjct: 160 YVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDG-EYVLTYEDK 218
Query: 855 ENDVLLVGDDPWEEFVGCVRCIRIL 879
+ D +LVGD PWE F R +RI+
Sbjct: 219 DGDWMLVGDVPWEMFTDSCRRLRIM 243
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 134 (52.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVV--RDLHDNTWTFRHIYR 171
F K LT SD +P++ AE+ FP + L++ D W FR+ Y
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 172 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR--DEKSQLMVGVRR 214
+ ++LT GWS +V K L AGD VLF R + + +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 107 SKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTF 166
S+ F K LT SD +P++ AE FP D Q T L +D + W F
Sbjct: 29 SERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDN--QNGTV-LDFQDKNGKMWRF 85
Query: 167 RHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 202
R+ Y + +++T GWS FV K+L AGD+V F R
Sbjct: 86 RYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 41/133 (30%), Positives = 59/133 (44%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFP---------PLDYTMQPPTQELVVRDLHDNTW 164
F K+LT SD +P++ AEK FP D + L D +W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 165 TFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR--DEKSQLMVGVRRANR---QQ 219
FR+ Y + ++LT GWS FV K+L GD V F R + +L +G RR +
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSSSS 165
Query: 220 TALPSSVLSADSM 232
A +S ++ SM
Sbjct: 166 VAATNSAVNTSSM 178
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 116 (45.9 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 801 YTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVL 859
+ KV G +GR +D+ F Y+ L + MF + + L Y D + D +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWM 133
Query: 860 LVGDDPWEEFVGCVRCIRILSPQ 882
+VGD PW+ F+ VR ++I P+
Sbjct: 134 MVGDIPWDMFLETVRRLKITRPE 156
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/151 (27%), Positives = 64/151 (42%)
Query: 735 CLMNTFS-SSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQP 793
C N F SS + ++ T L S S + + V E ++ Q
Sbjct: 16 CKSNPFGVSSSNTRNLSTDLRLGLSFGSSSGQYYNGGDNHEYDGVGAAEEMMIMEEEEQN 75
Query: 794 VVPPMRT-YTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRG--TEWK- 848
+ + Y KV G +GR ID+ + Y +L + ++ MF L + +E
Sbjct: 76 ECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSH 135
Query: 849 -LVYVDYENDVLLVGDDPWEEFVGCVRCIRI 878
L Y D E D ++VGD PWE F+ VR ++I
Sbjct: 136 VLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQ-------PPTQELVVRDLHDNT--- 163
F K+LT SD +P++ AEK FP + T++ ++ D +
Sbjct: 29 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKC 88
Query: 164 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRD--EKSQLMVGVRRANRQQTA 221
W FR+ Y + ++LT GWS +V K L AGD V F R + +L +G RR ++
Sbjct: 89 WKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASSS 148
Query: 222 LPSSVLSADSM 232
SV+S +++
Sbjct: 149 PAVSVVSQEAL 159
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 800 TYTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGLE-GLLNDP---RGTEWKLVYVDY 854
+Y KV G+ R ID+ +KNY EL A+E MF G ++ +G+ + Y D
Sbjct: 75 SYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDK 134
Query: 855 ENDVLLVGDDPWEEFVGCVRCIRILSPQE 883
+ D +LVGD PW+ F + +RI+ E
Sbjct: 135 DGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 122 (48.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGL---EGLLNDP-RGTEWKLVYVDYE 855
Y KV G+ R ID++ +K Y EL A+E MF E D +G+++ Y D +
Sbjct: 94 YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKD 153
Query: 856 NDVLLVGDDPWEEFVGCVRCIRILSPQEVE 885
D +L+GD PWE F+ + +RI+ E +
Sbjct: 154 GDWMLIGDVPWEMFICTCKRLRIMKGSEAK 183
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 118 (46.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 801 YTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMF-----GLEGLLND---PR-----GTE 846
+ KV G ++GR +D+ +Y+ L +E MF G GL + P +E
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190
Query: 847 WKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMS 888
+ L Y D E D +LVGD PW F+ V+ +R++ E ++
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
Score = 50 (22.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 120 ASDTSTHGGFSVPRRAAEKL-FPPL 143
A+D+++H G S PR +++ + +PP+
Sbjct: 59 AADSASHAGSSPPRSSSQVVGWPPI 83
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 801 YTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGL---LNDPRGTEWKLVYVDYEN 856
Y KV G R +D+ + + YD+L A++++FG G+ L D E+ +Y D +
Sbjct: 98 YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDG 157
Query: 857 DVLLVGDDPWEEFVGCVRCIRIL 879
D +L GD PW F+ + +RI+
Sbjct: 158 DWMLAGDVPWGMFLESCKRLRIM 180
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 118 (46.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 787 QNTSWQPVVPPMR-----TYTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGL---EG 837
Q W PV + +Y KV G+ R ID+ +KNY EL A+E MF + E
Sbjct: 60 QIVGWPPVRSSRKNNNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEY 119
Query: 838 LLNDP-RGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRIL 879
+ +G+ + Y D + D +LVGD PW+ F + +RI+
Sbjct: 120 CEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIM 162
>TAIR|locus:2119976 [details] [associations]
symbol:PAP2 "AT4G29080" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=ISS;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0048438 "floral whorl
development" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 EMBL:AL078470
EMBL:AL161574 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AF087936 EMBL:AJ458326 EMBL:AF332402
EMBL:AY053404 EMBL:AY133516 IPI:IPI00539897 PIR:T08963
RefSeq:NP_194637.1 UniGene:At.3406 IntAct:Q9ZSY8 STRING:Q9ZSY8
EnsemblPlants:AT4G29080.1 GeneID:829029 KEGG:ath:AT4G29080
GeneFarm:3186 TAIR:At4g29080 InParanoid:Q9ZSY8 OMA:HGGSANW
PhylomeDB:Q9ZSY8 ProtClustDB:CLSN2916037 Genevestigator:Q9ZSY8
GermOnline:AT4G29080 Uniprot:Q9ZSY8
Length = 305
Score = 96 (38.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 834 GL-EGLLNDP-RGTEWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPQEVEQMSEEG 891
GL E L D RG+E+ + Y D ++D +LVGD PWE F+ + +RI+ E ++
Sbjct: 238 GLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRV 297
Query: 892 MKLLNS 897
M+ S
Sbjct: 298 MEKCRS 303
Score = 77 (32.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 34/137 (24%), Positives = 54/137 (39%)
Query: 701 VSNGGSTMIDHSVSSAILDEFCTLKDAN---FQNPPDCLMNTFSSSQDVQSQITSASLAD 757
V + GST V S +KD F P + SS+ S+
Sbjct: 90 VFSPGSTTATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPP 149
Query: 758 SQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRTYTKVQKTGSVG-RSIDV 816
++F + + +N + +E+ QP + Y KV G+ R ID+
Sbjct: 150 IRSFRKNSMASSQSQKPGNNSETEEAEAKSGPE-QPCL-----YVKVSMEGAPYLRKIDL 203
Query: 817 TNFKNYDELCSAIERMF 833
+K+Y EL SA+E+MF
Sbjct: 204 KTYKSYLELSSALEKMF 220
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/104 (31%), Positives = 53/104 (50%)
Query: 114 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFR-HIYRG 172
F K L+ASD G +P+ AE FPP+ P L ++D+ W F+ +
Sbjct: 286 FEKVLSASDAGRIGRLVLPKACAEAYFPPISL---PEGLPLKIQDIKGKEWVFQFRFWPN 342
Query: 173 QPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDE-KSQLMVGVRRA 215
R + G + + S +L+AGD+V F R E + +L++G R+A
Sbjct: 343 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGKLVMGYRKA 386
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/74 (31%), Positives = 32/74 (43%)
Query: 291 TEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDE--PGCSD-KQKRVSPWEIETPE 347
TE GK MG + + GS NL + + PGC D ++ E +
Sbjct: 373 TEPEGKL-VMGYRKATNSTATQMFKGSSEPNLNMFSNSLNPGCGDINWSKLEKSEDMAKD 431
Query: 348 SLFIFPSLTSGLKR 361
+LF+ SLTS KR
Sbjct: 432 NLFLQSSLTSARKR 445
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGLE-GLLNDP---RGTEWKLVYVDYE 855
+ KV G+ R ID+ + Y EL A+E MF L G ++ +G+E+ Y D +
Sbjct: 94 FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKD 153
Query: 856 NDVLLVGDDPWEEFVGCVRCIRILSPQEVE 885
D +LVGD PW+ FV + +RI+ E +
Sbjct: 154 GDWMLVGDVPWDMFVTSCKRLRIMKGTEAK 183
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/148 (27%), Positives = 68/148 (45%)
Query: 754 SLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRT--YTKVQKTG-SV 810
SL ++QA + G V DE L++ S + V P ++ + KV G +
Sbjct: 83 SLVNNQAMKAARAEEGDG--EKKVVKNDE---LKDVSMK-VNPKVQGLGFVKVNMDGVGI 136
Query: 811 GRSIDVTNFKNYDELCSAIERMF-GLEGLLNDPR---------GTEWKLVYVDYENDVLL 860
GR +D+ +Y+ L +E MF G+ G + +++ L Y D E D +L
Sbjct: 137 GRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWML 196
Query: 861 VGDDPWEEFVGCVRCIRILSPQEVEQMS 888
VGD PW F+ V+ +RI+ E ++
Sbjct: 197 VGDVPWRMFINSVKRLRIMGTSEASGLA 224
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 120 ASDTSTHGGFSVPRRAAEKLFPPL 143
++++S+H G S PR + +PP+
Sbjct: 53 SAESSSHQGASPPRSSQVVGWPPI 76
>TAIR|locus:2034200 [details] [associations]
symbol:IAA15 "indole-3-acetic acid inducible 15"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC018848 HOGENOM:HOG000238261
EMBL:AJ441300 IPI:IPI00525123 PIR:F96835 PIR:S58502
RefSeq:NP_178155.1 UniGene:At.33908 IntAct:Q9C966
EnsemblPlants:AT1G80390.1 GeneID:844379 KEGG:ath:AT1G80390
GeneFarm:3170 TAIR:At1g80390 eggNOG:NOG283386 InParanoid:Q9C966
OMA:FTALENM PhylomeDB:Q9C966 ProtClustDB:CLSN2914430
Genevestigator:Q9C966 Uniprot:Q9C966
Length = 179
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 783 SSLLQN---TSWQPVVPPMRT----YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFG 834
SS++ N W PV +T Y KV G+ R +D+ + Y +L +A+E MF
Sbjct: 63 SSMVTNDQLVGWPPVATARKTVRRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF- 121
Query: 835 LEGLLNDPRGTEWK------LVYVDYENDVLLVGDDPWEEFVGCVRCIRIL 879
+G++ R TE + Y D + D++LVGD PW FV + +R++
Sbjct: 122 -QGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLM 171
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 812 RSIDVTNFKNYDELCSAIERMFG-LEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWEEFV 870
R ID+ +K Y EL A+E MF G + +E+ + Y D + D++LVGD P++ F
Sbjct: 142 RKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFT 201
Query: 871 GCVRCIRILSPQEVEQM-SEEGMKL 894
+ +RI+ E + S MK+
Sbjct: 202 STCKKLRIMKRSEATGLGSPRQMKI 226
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 112 (44.5 bits), Expect = 0.00051, P = 0.00051
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 801 YTKVQKTG-SVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGT----EWKLVYVDYE 855
Y KV G +GR ID+ + Y +L ++ MF L + L Y D E
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKE 145
Query: 856 NDVLLVGDDPWEEFVGCVRCIRI 878
D ++VGD PWE F+ VR ++I
Sbjct: 146 GDWMMVGDVPWEMFLSTVRRLKI 168
>TAIR|locus:2174562 [details] [associations]
symbol:IAA33 "indole-3-acetic acid inducible 33"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB011482 EMBL:AY669804
IPI:IPI00546108 RefSeq:NP_200552.1 UniGene:At.55603 IntAct:Q9FKM7
EnsemblPlants:AT5G57420.1 GeneID:835848 KEGG:ath:AT5G57420
GeneFarm:3193 TAIR:At5g57420 eggNOG:NOG257684 HOGENOM:HOG000006227
InParanoid:Q9FKM7 OMA:CQRISLD PhylomeDB:Q9FKM7
ProtClustDB:CLSN2916817 ArrayExpress:Q9FKM7 Genevestigator:Q9FKM7
GermOnline:AT5G57420 Uniprot:Q9FKM7
Length = 171
Score = 111 (44.1 bits), Expect = 0.00057, P = 0.00057
Identities = 44/154 (28%), Positives = 70/154 (45%)
Query: 734 DCLMNTF--SSSQDVQSQITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESSL-LQNTS 790
D L F +S Q + T+ A + ++S G + + F L +++
Sbjct: 10 DSLQRRFHQDNSTTQQPRDTTTPFIPKPASKNHNNSNSSSGAAGRS--FQGFGLNVEDDL 67
Query: 791 WQPVVPPMRTYTKVQKTGSVGRSIDVTNFKNYDELCSAIERMF--GLEGL--LNDPRGTE 846
VVPP+ T V + S+ + I + +Y L SA+ +MF G + L+
Sbjct: 68 VSSVVPPV---TVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTDDLDLSNAIP 124
Query: 847 WKLV-YVDYENDVLLVGDDPWEEFVGCVRCIRIL 879
L+ Y D END+LL GD W++FV + IRIL
Sbjct: 125 GHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 801 YTKVQKTGSVG-RSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVL 859
Y KV G+ R +D+ + Y EL A++ +FG + + Y D + D++
Sbjct: 110 YVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASASAAHFAVAYEDKDGDLM 169
Query: 860 LVGDDPWEEFVGCVRCIRILSPQE 883
L GD PW+ F+ + +RI+ E
Sbjct: 170 LAGDVPWDMFISSCKKLRIMRGSE 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 913 895 0.00087 122 3 11 23 0.44 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 633 (67 KB)
Total size of DFA: 472 KB (2220 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 91.63u 0.13s 91.76t Elapsed: 00:00:05
Total cpu time: 91.64u 0.13s 91.77t Elapsed: 00:00:05
Start: Tue May 21 10:04:18 2013 End: Tue May 21 10:04:23 2013