Query 002518
Match_columns 913
No_of_seqs 260 out of 1128
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 01:35:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02701 alpha-mannosidase 100.0 5E-190 1E-194 1724.3 91.9 909 1-910 138-1050(1050)
2 KOG1958 Glycosyl hydrolase, fa 100.0 9E-181 2E-185 1511.8 59.1 855 1-909 261-1128(1129)
3 KOG1959 Glycosyl hydrolase, fa 100.0 7E-171 2E-175 1428.8 61.7 802 1-912 143-996 (996)
4 PRK09819 alpha-mannosidase; Pr 100.0 1.9E-77 4.2E-82 739.2 70.2 562 1-709 101-708 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 1.6E-55 3.5E-60 479.1 39.0 534 1-713 377-933 (1078)
6 PF07748 Glyco_hydro_38C: Glyc 100.0 1E-44 2.3E-49 423.4 35.7 421 391-906 1-457 (457)
7 COG0383 AMS1 Alpha-mannosidase 100.0 2.6E-33 5.6E-38 341.5 30.7 490 1-708 292-790 (943)
8 PF01074 Glyco_hydro_38: Glyco 100.0 4.2E-32 9.1E-37 295.0 14.2 177 1-243 96-275 (275)
9 PF09261 Alpha-mann_mid: Alpha 99.9 2.1E-23 4.5E-28 181.3 6.0 80 248-333 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.9 1.3E-21 2.7E-26 169.7 8.0 79 249-333 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 98.7 2.5E-09 5.5E-14 132.1 1.6 260 2-335 102-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 85.7 0.79 1.7E-05 51.9 4.2 51 2-53 148-198 (360)
13 KOG4120 G/T mismatch-specific 55.2 50 0.0011 35.7 8.0 104 3-160 223-330 (426)
14 PRK12270 kgd alpha-ketoglutara 50.2 53 0.0012 41.4 8.2 70 136-213 991-1061(1228)
15 COG1543 Uncharacterized conser 48.0 22 0.00049 40.7 4.4 46 3-49 162-207 (504)
16 PF14849 YidC_periplas: YidC p 31.1 6.7E+02 0.015 26.7 13.5 25 503-527 2-26 (270)
17 TIGR03212 uraD_N-term-dom puta 30.9 7.3E+02 0.016 27.3 12.8 48 2-52 139-187 (297)
18 PF06045 Rhamnogal_lyase: Rham 26.9 7.2E+02 0.016 25.7 12.4 30 500-530 15-44 (203)
19 TIGR03593 yidC_nterm membrane 23.4 1.1E+03 0.024 26.5 14.8 27 501-527 74-100 (366)
20 PF02929 Bgal_small_N: Beta ga 21.7 1E+03 0.022 25.7 12.8 27 505-532 2-28 (276)
No 1
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=5.1e-190 Score=1724.28 Aligned_cols=909 Identities=77% Similarity=1.270 Sum_probs=791.5
Q ss_pred ChhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCCCc
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~ 80 (913)
||||++||+||+++||+.|++||||||||||++|||||++|||+++||||+||++|+.|+.++.+||+||++|++++|++
T Consensus 138 I~Ql~~G~~~l~~~fG~~P~~~W~iDpFGhs~~~P~Ll~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~ 217 (1050)
T PLN02701 138 IEQITEGNMWLNDTIGVAPKNSWAIDPFGYSSTMAYLLRRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTD 217 (1050)
T ss_pred HHHHHhhhHHHHhhcCCCCCcCccCCCCCCCHHHHHHHHhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred eEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 160 (913)
||||+||+|+|++||+|||+|+|||||||.|++|++++.|||+++|..++++||++||++|++++++++..|++|+||+|
T Consensus 218 Ift~~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p 297 (1050)
T PLN02701 218 IFVHMMPFYSYDIPHTCGPEPAICCQFDFARMRGFQYELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVP 297 (1050)
T ss_pred EEEEEccccccCcccccCCCcccccccccccccccccccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEe
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred ecCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcc
Q 002518 161 LGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFF 240 (913)
Q Consensus 161 ~G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDff 240 (913)
+||||+|...++|..||+||++||+|||++++.+++++||||++||++|+++..+.+++.+|++.++....||+++||||
T Consensus 298 ~GdDf~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff 377 (1050)
T PLN02701 298 LGDDFRYISIDEAEAQFRNYQKLFDYINSNPSLKAEVKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFF 377 (1050)
T ss_pred cCCCCCCcchhHHHHHHHhHHHHHHHHhhCcccCceEEECCHHHHHHHHHhhhccccccccccccccccCCCceeccccc
Confidence 99999998878999999999999999999987779999999999999999876555667778877766678999999999
Q ss_pred cccccCCCceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccCCCCCC
Q 002518 241 TYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGT 320 (913)
Q Consensus 241 pyad~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHDaItGT 320 (913)
||+|+.++||||||||||++|+++|++|++||+||+|+++|...+....+..+|....+.|+.|||+|+++|||||||||
T Consensus 378 ~Ya~~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGT 457 (1050)
T PLN02701 378 TYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEILFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGT 457 (1050)
T ss_pred ccccccccccceeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCcc
Confidence 99999999999999999999999999999999999999997543222235556655567899999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCC
Q 002518 321 AKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRE-RYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPL 399 (913)
Q Consensus 321 sk~~V~~Dy~~rl~~a~~~~~~v~~~~l~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL 399 (913)
||++|++||..||.+|+..++.+++.+++.|+.... +.+.....|+.|+.+.+++.||++.++.+..++...|+|||||
T Consensus 458 sk~~V~~Dy~~rl~~~~~~~~~~~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL 537 (1050)
T PLN02701 458 AKDHVVVDYGTRMHTSLQDLQIFMSAAVEVLLGIRHEKSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPL 537 (1050)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccccCCCceEEEEECCC
Confidence 999999999999999999999999999999986421 1222334578888889999999887666555567889999999
Q ss_pred CcceeEEEEEEecCCcEEEEcCCCeEeeEeeccccccCCcccccCcEEEEEEEecCCCceEEEEEEeCccCcCCCCccee
Q 002518 400 EQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKL 479 (913)
Q Consensus 400 ~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~ 479 (913)
+|+|+++|+|+|+.+.+.|+|.+|++|++|++|+|...........|+|+|.|+||||||++|+|......+....++.+
T Consensus 538 ~~~r~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~ 617 (1050)
T PLN02701 538 EQTREEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQHDGEKLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKL 617 (1050)
T ss_pred CceeeEEEEEEecCCcEEEEcCCCCEEeEEEeccccccccccccceEEEEEEEecCCceeEEEEEEEcCCCccccccccc
Confidence 99999999999999999999999999999999987653333445689999999999999999999876443322222222
Q ss_pred ee-cCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEE-cccCceEEEEEEEEEeccCCCceeEEccCCCC
Q 002518 480 KY-SSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSSQGSGAYLFMPNGDA 557 (913)
Q Consensus 480 ~~-~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~si~-~k~g~~~~~~~~f~~Y~~~~sgaYiF~P~~~~ 557 (913)
.. +....++++.++.+.....+.++|||++++|+||++||+|++|. +++|....+.++|.+|.+++||||+|+|++++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s~~SGAYiFrP~~~~ 697 (1050)
T PLN02701 618 KVFNSDDKFPCPEPYSCSKLEGDTVEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSSQGSGAYLFKPDGEA 697 (1050)
T ss_pred ccccccccccccccccccccCCCcEEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecCCCCcceEEcCCCCC
Confidence 11 11222333334443333445689999999999999899999998 46788888999999999999999999999988
Q ss_pred CCcccCCceEEEEECCcEEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCCceEEEEEEEeeCC
Q 002518 558 HPITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDN 637 (913)
Q Consensus 558 ~~~~~~~~~~~v~~G~l~~~v~~~~~~~~~~~~i~~~irLy~~~~~~~~~~ie~~~~Vd~~~~~~~~~el~~rf~t~i~s 637 (913)
.++......+.+++|||+++|++.+...|+.++++|++|||++.+.+++..||++|+||++|.+..|||++|||.|+|+|
T Consensus 698 ~p~~~~~~~~~v~~Gplv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~d~~~kEii~R~~T~i~s 777 (1050)
T PLN02701 698 QPIVQAGGLVVVSEGPLVQEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGHDFNDKELIVRFKTDIDN 777 (1050)
T ss_pred cccCCCCceEEEEeCCEEEEEEEEeecccCCcceEEEEEEecCCCccccceEEEEEEecCcccCCCCcEEEEEEeecccC
Confidence 77766666677899999999999765567778999999999985455555899999999998767899999999999999
Q ss_pred CCeEEEeCCCCcccccccCCCCCCCcceecccceeEEecCCCceeEEeeccccceeeccCCeEEEEEeecccccCCCCCC
Q 002518 638 KRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLG 717 (913)
Q Consensus 638 ~~~fyTDsnG~~~ikR~~~~~~pv~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~lElml~Rr~~~DD~rG~g 717 (913)
+++||||+|||||+||++|+++|++||||||+++|||+|+++.||||+|||++||||+++|+||||||||+++||+||||
T Consensus 778 ~~~FYTDsNG~qm~kR~~~~~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvg 857 (1050)
T PLN02701 778 KRVFYSDLNGFQMSRRETYDKIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLG 857 (1050)
T ss_pred CCeEEEcCccceeeeecccccCccccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCcccc
Confidence 99999999999999999999999999999999999999954589999999999999999999999999999999999999
Q ss_pred cCcccCcceeEEEEEEEeeccCCCcccCCCCcccCcchhhhhhcccccCcceeeeccCCCCCcCCC-CCCCcCCCCCCCC
Q 002518 718 QGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQP-PPRSFSPLAGSLP 796 (913)
Q Consensus 718 e~l~d~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~~l~~p~~~~~~~~~~~~~~~~-~~~~~s~l~~~LP 796 (913)
|||+||+++.++|||++|.+.+.+.. .+......|||+||.++..|+||+++|+.++........ ...+|+||.++||
T Consensus 858 e~l~dnk~~~~~f~ll~e~~~~~~~~-~~~~~~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~lp 936 (1050)
T PLN02701 858 QGVMDNRPMNVVFHLLLESNISSSPP-ASNPLPLQPSLLSHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAKPLP 936 (1050)
T ss_pred ccccccccccceEEEEEecccccCCC-CCCCCcCCccHHHHHHHHhhcCCchhhcccCccccccccccccccccccCCCC
Confidence 99999999999999999988753222 333333349999999999999999999864433322221 1278999999999
Q ss_pred CceeEEeeecCCCCCCCCCCCCccceEEEEEeeccCcccccCCCCccccccccccchhhhcccCccceEEEccccCcccc
Q 002518 797 CDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDD 876 (913)
Q Consensus 797 ~nvhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lf~~~~v~~~~e~sL~~~~~~ 876 (913)
||+||||||++++.++........++++||||.|+||+|+.++..+|.+.+..+|+|.+||+++.|.++++||||+++++
T Consensus 937 cD~hlv~lrt~~~~~~~~~~~~~~~~~~~l~r~~~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~ 1016 (1050)
T PLN02701 937 CDLHIVNFKVPRPSKYSQQEAEDPRFGLLLQRRGWDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDD 1016 (1050)
T ss_pred CcEEEEEeeccCCcccccccCCCccEEEEEEecccCcccccCCCccCcccCCcccchhhhhcccceeeeecccccccccc
Confidence 99999999999987542222223568999999999999998887789876555699999999999999999999999999
Q ss_pred ccccCCCCcccCCCCCCceEeccceeeEEEEEEe
Q 002518 877 IGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEMR 910 (913)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~v~l~Pmeirtf~~~~~ 910 (913)
.++++++.+.....+.+.|.|+||||+||+++++
T Consensus 1017 ~~~~~~~~~~~~~~~~~~i~l~pmei~~~~~~~~ 1050 (1050)
T PLN02701 1017 AEMLGYRKQAGSAAQEGIVLISPMEIQAYKLDLR 1050 (1050)
T ss_pred hhhccccccccccCCccceeeccceeeeEEEecC
Confidence 9999888777666677899999999999999874
No 2
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-181 Score=1511.76 Aligned_cols=855 Identities=47% Similarity=0.810 Sum_probs=739.1
Q ss_pred ChhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCCCc
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~ 80 (913)
|+|+++||+||++++|++|++||.|||||||++|||||+++||++++|||+||.+|+.++..|++||+||+.||..+.++
T Consensus 261 i~qliEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYLL~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tD 340 (1129)
T KOG1958|consen 261 IDQLIEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYLLRRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTD 340 (1129)
T ss_pred HHHHhhhhhHHhccCCCCCCcccccCCCCCCcchHHHHhhcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred eEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 160 (913)
|||||||||||||||||||+|++||||||+||+|++.+ |||+.+|..|++.||++||++|+|||+|++++|++|++|+|
T Consensus 341 l~tHmMPFysYDIphTCGPdP~ICCqFDFkRmpg~~~~-Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiP 419 (1129)
T KOG1958|consen 341 LLTHMMPFYSYDIPHTCGPDPKICCQFDFKRMPGGGCE-CPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIP 419 (1129)
T ss_pred hheeecccccccCCCccCCCCceeeeeecccCCCCCcC-CCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEe
Confidence 99999999999999999999999999999999999874 99999999999999999999999999999999999999999
Q ss_pred ecCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcc
Q 002518 161 LGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFF 240 (913)
Q Consensus 161 ~G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDff 240 (913)
+||||||...+||+.||.||++||++||+++.++++++|||++|||+||+++.... .. ....||+++||||
T Consensus 420 lGDDFRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aqFGTlsDYF~al~k~~~e~--------~k-g~~~FPtlSGDFF 490 (1129)
T KOG1958|consen 420 LGDDFRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQFGTLSDYFDALDKAYSER--------GK-GQEPFPTLSGDFF 490 (1129)
T ss_pred cCCccccCccHHHHHHHHHHHHHHHHHhcccccceeeecCCHHHHHHHHHHhhccc--------cC-CCCCCcccccCce
Confidence 99999999999999999999999999999999999999999999999999874311 11 1234999999999
Q ss_pred cccccCCCceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccc-cccCchhhHHHHHHHHHHhhhhcccCCCCC
Q 002518 241 TYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQ-CEKLPMSFAYKLTAARRNLALFQHHDGVTG 319 (913)
Q Consensus 241 pyad~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~-~~~~~~~~~~~L~~a~~~l~l~QhHDaItG 319 (913)
+|||+.++||||||||||++|++.|.+|++||+||+|+++|...+.... ...++....+.|++|||+|+++||||||||
T Consensus 491 tYaDr~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITG 570 (1129)
T KOG1958|consen 491 TYADRDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAHRVGLAQRIEESNYELLTAARRNLGLFQHHDAITG 570 (1129)
T ss_pred eeecccCccceeeeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhhhhccccccc
Confidence 9999999999999999999999999999999999999998754432111 224566667889999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cccCCCCcccccccccccCCCCcceEeeecCCceeEEEEE
Q 002518 320 TAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRE---RYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIF 396 (913)
Q Consensus 320 Tsk~~V~~Dy~~rl~~a~~~~~~v~~~~l~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvf 396 (913)
|||++|+.||..||..++..|+.++.+++..|++... +.+.....+++++.+.+.+.+|.+.++.++. .+..||+|
T Consensus 571 TaK~~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~~~-~~~~vvlf 649 (1129)
T KOG1958|consen 571 TAKDAVVVDYGQRLHESLVNLQIVLENALELLLGKDSETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGLSS-GPRSVVLF 649 (1129)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCCceehhhcccCCCcCcccceeeccC-CCceEEEe
Confidence 9999999999999999999999999999999998653 2233345688888899999999988887744 45899999
Q ss_pred cCCCcceeEEEEEEecCCcEEEEcCCCeEeeEeeccccccCCccccc-CcEEEEEEEecCCCceEEEEEEeCccCcCCCC
Q 002518 397 NPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFT-GRHRLHWKATIPALGLQVYYIANGFVGCDKAK 475 (913)
Q Consensus 397 NpL~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~-~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~ 475 (913)
|||++.|.++|.|.|+++.|.|.+..|++|++||.|+|+...++... +.|+|.|.|.|||||..+|++..+...+....
T Consensus 650 N~l~q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l 729 (1129)
T KOG1958|consen 650 NPLEQEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTKTIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKL 729 (1129)
T ss_pred ccchhhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccceeecceeEEEEEEecccceeeEEEeeccCccccccc
Confidence 99999999999999999999999999999999999999854443333 48999999999999999999987643321111
Q ss_pred cceeeecCCCCCCCCCCCccccCCC--ceeEEeeceEEEEEeccCceEEEEEc-ccCceEEEEEEEEEec----cCCCce
Q 002518 476 PVKLKYSSDNSFSCPTPYACSKIEG--DVADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYS----SQGSGA 548 (913)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ieN~~~~v~fd~~~G~l~si~~-k~g~~~~~~~~f~~Y~----~~~sga 548 (913)
++ ...++.++..++++.... +-.+++|++.++.||+++|+|+++.. .+++...+...|..|. ++.|||
T Consensus 730 ~s-----~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~~~~sga 804 (1129)
T KOG1958|consen 730 PS-----KDTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGERISGDESGA 804 (1129)
T ss_pred cc-----CCCCcccCCCccceeecCccccceeeccceeEEeccccchhhhhhhcccCCCcccceeeccccccccCCCCce
Confidence 11 122333444444433322 23589999999999999999999884 4677777788888885 356899
Q ss_pred eEEccCCCCCCccc-CCceEEEEECCcEEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCCceE
Q 002518 549 YLFMPNGDAHPITE-AGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDREL 627 (913)
Q Consensus 549 YiF~P~~~~~~~~~-~~~~~~v~~G~l~~~v~~~~~~~~~~~~i~~~irLy~~~~~~~~~~ie~~~~Vd~~~~~~~~~el 627 (913)
|+|+|+|+++++.. ..+.+.+ +|+|+++|.+..++.+... .|.+|+|.|.. +|+++.||... ..|.|+
T Consensus 805 ylf~p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~v~~~~--~~~~~~~~G~~------vei~~~vdi~~--~~n~El 873 (1129)
T KOG1958|consen 805 YLFLPDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKNVLHRL--SQNVRGYSGEE------VEISNSVDIRK--EDNTEL 873 (1129)
T ss_pred EEEccCCCCCCceecCCCeEEe-ecceeeeeccccchHHHhc--hhheeccCCcc------eeeeceeeccc--ccchhh
Confidence 99999999998554 4456666 9999999998876555433 38999999974 99999999874 479999
Q ss_pred EEEEEEeeCCCCeEEEeCCCCcccccccCCCCCCCcceecccceeEEecCCCceeEEeeccccceeeccCCeEEEEEeec
Q 002518 628 IVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRR 707 (913)
Q Consensus 628 ~~rf~t~i~s~~~fyTDsnG~~~ikR~~~~~~pv~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~lElml~Rr 707 (913)
+|||.|+++++..||||+||+||+||.+..+.|+++|||||++++||+|.+ .||++++.+++|++||.+|+||||++||
T Consensus 874 a~R~st~vds~~~FyTDlnG~Q~~kR~~~~KlPlQaNyYPmpt~a~Iq~~~-~RlsihS~q~lGvssL~sG~iEIm~DRr 952 (1129)
T KOG1958|consen 874 AMRFSTDVDSGDLFYTDLNGMQMIKRRRLDKLPLQANYYPMPTAAFIQDAK-QRLSIHSAQSLGVSSLESGQIEIMLDRR 952 (1129)
T ss_pred hhhhhhcccCCceeeeccchhhhhhhhhcccCcccceeecccceeeeecCC-ceEEEEeecccCccccccceEEEEeccc
Confidence 999999999999999999999999999999999999999999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCcCcccCcceeEEEEEEEeeccCCCcccCCCCcccCcchhhhhhcccccCcceeeeccCCCCCcCCCCCCC
Q 002518 708 LSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRS 787 (913)
Q Consensus 708 ~~~DD~rG~ge~l~d~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~ 787 (913)
+.+||+||||||+.||+++...|+|++|...++........+.. ||++||.+++.|+||++.|+.+.+... ..+..
T Consensus 953 L~~DD~rGLgqGv~DNk~t~~~frlv~e~~~s~~~p~e~~~~~~-ps~~ah~a~~~l~yP~~~f~~~~pk~i---~~~g~ 1028 (1129)
T KOG1958|consen 953 LNQDDGRGLGQGVIDNKPTDMKFRLVLESLNSAQDPTENSRVSY-PSLAAHLASQSLNYPLMKFIYAEPKKI---EDQGI 1028 (1129)
T ss_pred ccCCCCccccccccccchhhheeeeeecccccccCchhcCCCCC-hhhhhhcccceecCCchhhcccCCCCh---hhccc
Confidence 99999999999999999999999999998876433333333444 999999999999999999885433221 12467
Q ss_pred cCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceEEEEEeeccCcccccCCCCccccccccccchhhhcccCccceEEE
Q 002518 788 FSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKA 867 (913)
Q Consensus 788 ~s~l~~~LP~nvhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lf~~~~v~~~~e 867 (913)
|.++..+||||+||+|||++.+.+. ...|+++||||.+.||+++.++. |. ..++++.+|+.+ +.+|+.
T Consensus 1029 ~~~~~~~lpcDl~lvt~rtl~~~~~-----~~~~~~lil~R~~~~c~~~~~g~--c~---~~ki~~~~ll~~--~~~v~~ 1096 (1129)
T KOG1958|consen 1029 FEPLNLSLPCDLHLVTFRTLESSKA-----AEKRAALILHRHATDCRSQKKGT--CG---QLKISVMDLLIK--AKSVKK 1096 (1129)
T ss_pred cccccCCCccceeEEEeeeccCccc-----ccccceeeeeecccccccccccc--cc---cccCcHHHHHHH--HHhhch
Confidence 8899999999999999999987552 45789999999999999977665 75 458999999998 899999
Q ss_pred ccccCccccccccCCCCcccCCCCCCceEeccceeeEEEEEE
Q 002518 868 TSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEM 909 (913)
Q Consensus 868 ~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~Pmeirtf~~~~ 909 (913)
|+|++++....-. +.....++||||++|++.+
T Consensus 1097 tsLs~l~~~~~~~----------~~~~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1097 TSLSLLQEVGGII----------GVEEQELSPMEISAFLTSL 1128 (1129)
T ss_pred hhHHhhhhcccCC----------Ccccccccccccccccccc
Confidence 9999998754221 2345678999999998865
No 3
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.3e-171 Score=1428.83 Aligned_cols=802 Identities=29% Similarity=0.466 Sum_probs=654.0
Q ss_pred ChhhhHHHHHHHhHhC--CCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCC
Q 002518 1 MHQIMEGNMWLNDTIG--FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEET 78 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG--~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~ 78 (913)
|||||+||+||+++|| .+|++||||||||||++||+||++||||+++|+||||+||+.|..++.||||||||.+++++
T Consensus 143 IDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslfAqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~ 222 (996)
T KOG1959|consen 143 IDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLFAQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSS 222 (996)
T ss_pred HHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHHHHhCccchheeecchhhHHHHHhhccceEEeecCccccch
Confidence 7999999999999999 88999999999999999999999999999999999999999999999999999999999989
Q ss_pred CceEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEE
Q 002518 79 SDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLL 158 (913)
Q Consensus 79 s~i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il 158 (913)
++||||+|+. +| +|||+|| ||..+ ..-|..|+| .+.++||++|++.|++.++.++..|||||||
T Consensus 223 ~~iFTg~l~n-~Y------~~P~gfc--~dv~c------~d~Pi~D~~-~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim 286 (996)
T KOG1959|consen 223 SQIFTGALYN-HY------SPPPGFC--FDVLC------GDDPIIDGP-RSYDYNVKERVDDFVAYAKNQAAYYRTNHIM 286 (996)
T ss_pred hhhhhhcccc-CC------CCCCCce--ecccc------CCCCCCCCC-CCCCccHHHHHHHHHHHHHHhHhheecceEE
Confidence 9999999986 77 4668999 77632 123555555 4789999999999999999999999999999
Q ss_pred EEecCCCCCCChhhHHHHHHhHHHHHHHHhcC--CCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCccc
Q 002518 159 VPLGDDFRYTTINEAEAQFRNYQLLFDYINSN--PSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLS 236 (913)
Q Consensus 159 ~p~G~Df~y~~~~~a~~~~~n~~kli~~iN~~--~~~~~~i~~sT~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~ 236 (913)
+|||+||+| ++|..||+||||||+|+|+. .+.++++.||||+||+++||+. +..||+++
T Consensus 287 ~~MG~DFqY---~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~----------------~~Twp~Kt 347 (996)
T KOG1959|consen 287 WPMGDDFQY---ENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAA----------------NQTWPVKT 347 (996)
T ss_pred EeccCCcee---hhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHh----------------cCcccccc
Confidence 999999999 67999999999999999966 3457999999999999999984 36899999
Q ss_pred CCcccccccCCCceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccCC
Q 002518 237 GDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDG 316 (913)
Q Consensus 237 gDffpyad~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHDa 316 (913)
.||||||+++|.||||||||||.+||+.|.++++|++|++|.++|... .. .....|+.++++|++.|||||
T Consensus 348 ~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~------~~---~~~~dl~~Lream~i~QHHDA 418 (996)
T KOG1959|consen 348 DDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLS------ST---EQGPDLDYLREAMAIMQHHDA 418 (996)
T ss_pred cccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCC------cc---ccCccHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999998542 11 112468889999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEE
Q 002518 317 VTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIF 396 (913)
Q Consensus 317 ItGTsk~~V~~Dy~~rl~~a~~~~~~v~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvf 396 (913)
||||+|+||++||++||..|+..|+.+++.+++.|..... ..|..|.. .+...||.+. ...+.+.|++|
T Consensus 419 VTGTekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~~------~~f~~C~~-lNiS~C~~t~----~~~~~~~v~~Y 487 (996)
T KOG1959|consen 419 VTGTEKQHVADDYARRLADGILGAEKLARDALRKLTNLPN------GEFQSCLL-LNISECAFTK----DGADNFIVTLY 487 (996)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC------ccchhhhh-hccccCCCCc----CCcCcEEEEEE
Confidence 9999999999999999999999999999999999987542 23555542 1223333221 23457889999
Q ss_pred cCCCcceeEEEEEEecCCcEEEEcCCCeEeeEeecccccc---CCcccccCcEEEEEEEecCCCceEEEEEEeCccCcCC
Q 002518 397 NPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRH---GKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDK 473 (913)
Q Consensus 397 NpL~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~---~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~ 473 (913)
|||+|.++++|||||+.+++.|+|+.|++|++|++|+... -..+....+|+|+|.|.|||+|+++|+|++.....
T Consensus 488 NpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~-- 565 (996)
T KOG1959|consen 488 NPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALESRNNDTKHELVFKASVPPLGIATYFIKKVASTE-- 565 (996)
T ss_pred cCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhccccCCCceEEEEEEecCccceEEEEeecCccc--
Confidence 9999999999999999999999999999999999997532 12334567899999999999999999998654321
Q ss_pred CCcceeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEE-cccCceEEEEEEEEEecc-------CC
Q 002518 474 AKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSS-------QG 545 (913)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~si~-~k~g~~~~~~~~f~~Y~~-------~~ 545 (913)
....+. .+. ..+.......|+|+++++.||.++|.|++|. +.+|.+..+.|+|.+|.+ +.
T Consensus 566 --~~~~~~--~~~--------i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~ 633 (996)
T KOG1959|consen 566 --RGSASH--VRN--------IKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQA 633 (996)
T ss_pred --cccccc--ccc--------cccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCcc
Confidence 100000 000 0111223478999999999998889999987 446888999999999964 34
Q ss_pred CceeEEccCCCCCCcccCCceEEEEECCcEEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecC-CCCC
Q 002518 546 SGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFND 624 (913)
Q Consensus 546 sgaYiF~P~~~~~~~~~~~~~~~v~~G~l~~~v~~~~~~~~~~~~i~~~irLy~~~~~~~~~~ie~~~~Vd~~~~-~~~~ 624 (913)
||||+|||...+.++.+....+.|+.|||+.||++.. .+|++|++|||+|.+ ++|+||.|+|+|. +..|
T Consensus 634 SgAYiFRp~~~~~~~~~~~vel~vv~G~LV~EVhQ~f-----~~wiSQviRvy~g~~-----~~E~Ew~VGpIp~~d~~g 703 (996)
T KOG1959|consen 634 SGAYIFRPGQADIPIVSDQVELTVVDGPLVKEVHQQF-----NPWISQVIRVYEGKN-----HVEFEWLVGPIPIDDGIG 703 (996)
T ss_pred CcceEecCCCCCccccccceEEEEecCchHHHHHHHH-----HHHHhheeEecCCCc-----ceEEEEEecceecCCCcc
Confidence 9999999943445666666788999999999999875 358999999999998 7999999999996 5689
Q ss_pred ceEEEEEEEeeCCCCeEEEeCCCCcccccc-----cCC---CCCCCcceecccceeEEecCCCceeEEeeccccceeecc
Q 002518 625 RELIVRYKTDIDNKRIFYSDLNGFQMSRRE-----TYD---KIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLK 696 (913)
Q Consensus 625 ~el~~rf~t~i~s~~~fyTDsnG~~~ikR~-----~~~---~~pv~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~ 696 (913)
||+|+||+|+|.+++.|||||||+||+||. +|. ++|++||||||++.|||+|++ .||+||+||++|++|+.
T Consensus 704 kEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~-~rl~vL~DRAqGgsSl~ 782 (996)
T KOG1959|consen 704 KEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSK-KRLSVLNDRAQGGSSLK 782 (996)
T ss_pred ceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCC-ceEEEEeecccCCcccc
Confidence 999999999999999999999999999994 342 689999999999999999996 89999999999999999
Q ss_pred CCeEEEEEeecccccCCCCCCcCcccCcce----eE--EEEEEEeeccCCCcccCCCCcccCcchhhhhhcccccCccee
Q 002518 697 DGWLEIMLDRRLSRDDGRGLGQGVLDNRAM----NV--VFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHA 770 (913)
Q Consensus 697 ~G~lElml~Rr~~~DD~rG~ge~l~d~~~~----~~--~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~~l~~p~~~ 770 (913)
||+||||||||+++||+|||||+|+|+... .. ++++++..... .+... .+.+.+++..|.+.
T Consensus 783 dG~lElMLHRRl~~DD~~Gv~EaLnEt~~~~~gL~~rGk~~~~l~~~~d--~a~~~----------~r~~~~ei~~P~~~ 850 (996)
T KOG1959|consen 783 DGQLELMLHRRLLNDDGRGVGEALNETVYGHAGLIARGKLYVLLDKAGD--GATGW----------RRLAEQEIHLPLWK 850 (996)
T ss_pred CCeEEEEeeehhhcccccccchhcccccccccceEEeeeEEEEEecccc--cchhh----------hhhhhhhcccHHHH
Confidence 999999999999999999999999998543 22 23333422211 11111 12345788899998
Q ss_pred eeccCCCCCcCC-CCC--CCcCCCCCCCCCceeEEeeecCCCCCCCCCCCCccceEEEEEeeccCcccccCCCCcccccc
Q 002518 771 FISKKPQELSVQ-PPP--RSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVV 847 (913)
Q Consensus 771 ~~~~~~~~~~~~-~~~--~~~s~l~~~LP~nvhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~ 847 (913)
|+++.....+.. ... ..|++ ...||.+||||||+.|++..+ .+|++|+++. |.|+.+ ..
T Consensus 851 ~f~~~~~~~~~~~~s~~~~~f~~-~~~lP~~vhLlTLe~~~~~~v------LlRleh~~e~-gED~~~----------s~ 912 (996)
T KOG1959|consen 851 FFSKPEGGEALNSLSIPGSAFSG-SYDLPQSVHLLTLEEWSKDEV------LLRLEHLYEV-GEDSEL----------SQ 912 (996)
T ss_pred HhhcCCCccchhhcCCCcccccc-ccCCCcceeeeecccCCCCce------Eeeehhhhhc-cccccc----------Cc
Confidence 988765443321 112 23666 568999999999999986543 2444444432 333222 23
Q ss_pred ccccchhhhcccCccceEEEccccCccccccc--cCCCCcc-c--------------CCC--CCCceEeccceeeEEEEE
Q 002518 848 DEPLNLFSMFKGLAILNAKATSLNLLNDDIGM--LGYPEQL-E--------------DVS--QDGQVTIAPMEIQAYKLE 908 (913)
Q Consensus 848 ~~~~~l~~lf~~~~v~~~~e~sL~~~~~~~~~--~~~~~~~-~--------------~~~--~~~~v~l~Pmeirtf~~~ 908 (913)
..+|+|++||.+++|.+|+||||+++....++ .+|.|.. + +.. ....|+|.|||||||+|+
T Consensus 913 vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~mkr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~ 992 (996)
T KOG1959|consen 913 VVSFNLRKLFSALDIVEIRETTLDGNQPLSDMKRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIK 992 (996)
T ss_pred ceEEEhHHhhcccCeeEEEEeeccCccChhhhhhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEE
Confidence 56799999999999999999999887765544 4454441 1 111 123799999999999999
Q ss_pred EeeC
Q 002518 909 MRPN 912 (913)
Q Consensus 909 ~~~~ 912 (913)
++++
T Consensus 993 ~~~~ 996 (996)
T KOG1959|consen 993 FQQK 996 (996)
T ss_pred EecC
Confidence 8864
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=1.9e-77 Score=739.21 Aligned_cols=562 Identities=18% Similarity=0.236 Sum_probs=441.8
Q ss_pred ChhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCCCc
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~ 80 (913)
||||++||+|+ ++||..|++||+|||||||++|||||++|||++++|||+..+ +...+..+|+|+|+ |||+
T Consensus 101 iRqll~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl~~~Gi~~~~~wr~~~~----~~~~~~~~F~W~g~----DGs~ 171 (875)
T PRK09819 101 VRNLLYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIYNGFGITRTLFWRGVSD----RHGTDKTEFLWQSD----DGSE 171 (875)
T ss_pred HHHHHHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHHHhCCCCeEEEEecccc----cccCCCceEEEECC----CCCe
Confidence 79999999999 799999999999999999999999999999999999997542 11246789999998 6899
Q ss_pred eEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 160 (913)
||||++|. +|.. +. . .+.+.++++++++.+++.+++++ .++++|+|
T Consensus 172 V~t~~~~~-~Y~~----g~------------------------~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ 217 (875)
T PRK09819 172 VLAQQLPL-GYAI----GK------------------------Y--LPEDEEELKKRLDEYFGVLEKKS---STKNILLP 217 (875)
T ss_pred EEEEECcc-cccc----CC------------------------C--CCcCHHHHHHHHHHHHHHHhhcC---CCCcEEEe
Confidence 99999985 5521 10 0 12355789999998888877775 78999999
Q ss_pred ecCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcc
Q 002518 161 LGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFF 240 (913)
Q Consensus 161 ~G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDff 240 (913)
+|+|+.+. .+||.++|+.+|.... .+++++||+++||++++++. ..||+++|||+
T Consensus 218 ~G~d~~p~--------~~~~~e~i~~~~~~~~-~~~~~~st~~~yf~~l~~~~----------------~~lp~~~GEl~ 272 (875)
T PRK09819 218 NGHDQMPL--------QKNLFEVMDKLNEIYP-EREFVISRFENVFEKLEKQR----------------DNLPTLKGEFI 272 (875)
T ss_pred cCCCCCcc--------cccHHHHHHHHHhhCC-CCcEEECCHHHHHHHHHhhc----------------CCCCeeeeecC
Confidence 99999774 2578888888887743 36889999999999998742 46999999998
Q ss_pred c-ccccCCCceeeeecCchhhhhHHHHHHHHHH-HHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccCCCC
Q 002518 241 T-YADRQQDYWSGYYVSRPFFKAVDRVLEQTLR-ATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVT 318 (913)
Q Consensus 241 p-yad~~~~yWtGyyTSRp~~K~~~R~~e~~L~-~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHDaIt 318 (913)
. +.. .+++||||||+.+|++||++|.+|+ .+|+|+++|... |..|| .+.|++|||.|+++||||+||
T Consensus 273 ~~~y~---~~HrG~~TSr~~iK~~nr~~E~~L~~~~E~l~~la~~~-----g~~yp---~~~l~~~Wk~ll~nq~HD~i~ 341 (875)
T PRK09819 273 DGKYM---RVHRSIFSTRMDIKIANARIENKIVNVLEPLASIAYSL-----GFEYP---HGLLEKIWKEMFKNHAHDSIG 341 (875)
T ss_pred CCccc---cccCCccccHHHHHHHHHHHHHHHHHHhchHHHHHHHc-----CCCCC---HHHHHHHHHHHHHhcCCCccc
Confidence 4 222 3458999999999999999999997 499999998642 56677 468999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcC
Q 002518 319 GTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNP 398 (913)
Q Consensus 319 GTsk~~V~~Dy~~rl~~a~~~~~~v~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNp 398 (913)
||++++|++||..|+.++.+.++.+++.+++.|+... ..++...++||||
T Consensus 342 G~sid~V~~d~~~r~~~~~~~~~~l~~~~l~~l~~~i------------------------------~~~~~~~~~vfN~ 391 (875)
T PRK09819 342 CCCSDTVHRDIVARYKLAEDLADNLLDFYMRKIADNM------------------------------PQSDADKLTVFNL 391 (875)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------CcCCCCEEEEEcC
Confidence 9999999999999999999999999999999886521 1123467999999
Q ss_pred CCcceeEEEEEEe--cCCcEEEEcCCCeEeeEeeccccccCC-----------cccccCcEEEEEEE-ecCCCceEEEEE
Q 002518 399 LEQTREEIVMVIV--NRPDITVLDSNWTCVQSQISPELRHGK-----------SKIFTGRHRLHWKA-TIPALGLQVYYI 464 (913)
Q Consensus 399 L~~~r~~~V~v~v--~~~~~~V~d~~g~~v~~Qi~~~~~~~~-----------~~~~~~~~~l~f~a-~vPplG~~ty~i 464 (913)
|+|+|+++|++++ ..+.+.|.|.+|+++++|+........ ......++.+.|.+ +||||||++|.+
T Consensus 392 l~~~r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~vP~lG~~~~~i 471 (875)
T PRK09819 392 LPYEREEVINTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVHYGNYDPFMEFDIQINVQILPAMGYRTLYI 471 (875)
T ss_pred CCccceeEEEEEEEeccCCEEEECCCCCEeeEEEeeccccccchhhcceeccCCCCceEEEEEEEEECCCCCcccEEEEE
Confidence 9999999999876 456789999999999999974321100 00001256788885 899999999998
Q ss_pred EeCccCcCCCCcceeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEEcc-cCceEEEEEEEEEec-
Q 002518 465 ANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISHI-NGSQNVVEEEIDMYS- 542 (913)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~si~~k-~g~~~~~~~~f~~Y~- 542 (913)
...+.. +... ........|||++|+|+||+ +|.|+ |.+| +|++. .++..|.
T Consensus 472 ~~~~~~-----~~~~-----------------~~~~~~~~ieN~~~~v~i~~-~G~l~-l~dk~~gr~~---~~~~~~~d 524 (875)
T PRK09819 472 ELNEEG-----NVIE-----------------PKSSAEGIIENEFYQITLNE-NGTLT-IVDKKSGKTY---DRQLIIEE 524 (875)
T ss_pred EeCCcc-----cccc-----------------ccccccceEecCcEEEEEec-CCcEE-EEECCCCcEE---eceEEEEe
Confidence 754321 0000 01124568999999999995 79995 6654 56654 2344554
Q ss_pred -cCCCceeEEccCCCCCCcccC--CceEEEEECCcEEEEEEeeccc-------------ccCCceEEEEEEecCCCccce
Q 002518 543 -SQGSGAYLFMPNGDAHPITEA--GGLMVISKGPLMEEAYSYPRTA-------------WERSPISHSTRLYNGNNMIQE 606 (913)
Q Consensus 543 -~~~sgaYiF~P~~~~~~~~~~--~~~~~v~~G~l~~~v~~~~~~~-------------~~~~~i~~~irLy~~~~~~~~ 606 (913)
++.+++|+|.|..++..+... ...+.+++|+++.++++.+... ...+.++|+++|+++++
T Consensus 525 ~~d~gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~---- 600 (875)
T PRK09819 525 NGDDGDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSR---- 600 (875)
T ss_pred cCcCCCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCC----
Confidence 345899999997655444332 2456788899999988775311 13457999999999998
Q ss_pred eEEEEEEEEeeecCCCCCceEEEEEEEeeCCCCeEEEeCCCCcccccccCCC--CCCC--------cceecccceeEEec
Q 002518 607 FLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDK--IPLQ--------GNYYPMPALAFMQG 676 (913)
Q Consensus 607 ~~ie~~~~Vd~~~~~~~~~el~~rf~t~i~s~~~fyTDsnG~~~ikR~~~~~--~pv~--------~nyYP~~s~~~i~D 676 (913)
+|||+++|||.. .+|.|++.|+++|.+..++| | .+|++++|++..+ .+++ -+.|||.+++.|.|
T Consensus 601 -~i~~~~~vdw~~---~~~~Lrv~fp~~i~~~~~~~-d-~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~~~~~~~~v~ls~ 674 (875)
T PRK09819 601 -RIDFDVNLDNQA---DDHRLRVLFPTEIASKFSLA-D-QQFGSITRPVNDPAMDVWEQEGWQEAPISIEPMQSFVALHD 674 (875)
T ss_pred -EEEEEEEEeccc---cceEEEEEccCCCCCCceEc-C-CCceEEECCCcCccccccccccceeCCCCChhhhceEEEec
Confidence 899999999986 68999999999999998655 5 7888999987531 1111 15689999999999
Q ss_pred CCCceeEEeeccccceeeccC--CeEEEEEeeccc
Q 002518 677 SNGQRFSVHSRQSLGVASLKD--GWLEIMLDRRLS 709 (913)
Q Consensus 677 ~~~~~ltvltd~~~G~ssl~~--G~lElml~Rr~~ 709 (913)
.+ .+++|+||+.+|.....+ +.|.|+|.|+..
T Consensus 675 ~~-~Gvall~dg~~ey~v~g~~~~~i~LTLlRs~g 708 (875)
T PRK09819 675 ER-HGVAVFTEGVREYEIIGENYDTIALTLFRGVG 708 (875)
T ss_pred CC-ceEEEECCCcceEEEecCCCCeEEEEeecccC
Confidence 85 899999999999764432 389999999974
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-55 Score=479.08 Aligned_cols=534 Identities=18% Similarity=0.272 Sum_probs=401.0
Q ss_pred ChhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCCCc
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~ 80 (913)
|||++.|+.|+.++||...+.-|+||+||+|++||||.+.+|||.|++|++.|+.-+.++ +..|.|.|. |||+
T Consensus 377 vRQFl~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQicrlcGidrFLTQKLSWNniNSFP---hsTFnW~gl----DGSq 449 (1078)
T KOG4342|consen 377 VRQFLQGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQICRLCGIDRFLTQKLSWNNINSFP---HSTFNWEGL----DGSQ 449 (1078)
T ss_pred HHHHHhhhhHHHHHhhhhhcceeccccccccchhhHHHHhhcHHHHHHhhccccccCcCC---ccceeeeec----cCce
Confidence 689999999999999999999999999999999999999999999999999999887655 569999999 7999
Q ss_pred eEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 160 (913)
|++||.|..+|... .+|.+ .+..+.+....-+.++-|+.
T Consensus 450 vl~HmPPgntYtad-------------------------------------~~v~d----VL~tv~qnk~~~~~~~gl~l 488 (1078)
T KOG4342|consen 450 VLVHMPPGNTYTAD-------------------------------------GSVED----VLKTVAQNKDKGRANHGLFL 488 (1078)
T ss_pred EEEecCCCCccccc-------------------------------------CcHHH----HHHHHHhcCCccccCcceEE
Confidence 99999997677321 12332 22222333333355555555
Q ss_pred ec--CCCCCCChhhHHHHHHhHHHHH--HHHhcCCCCceEEEeC-CHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcc
Q 002518 161 LG--DDFRYTTINEAEAQFRNYQLLF--DYINSNPSLNAEAKFG-TLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSL 235 (913)
Q Consensus 161 ~G--~Df~y~~~~~a~~~~~n~~kli--~~iN~~~~~~~~i~~s-T~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~ 235 (913)
+| |+-.. ++-++++||- +-++....+-++++.| |+.+||+++.+... +...+|+|
T Consensus 489 fG~GDGGGG-------PT~eML~klrR~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtn-------------qg~~LptW 548 (1078)
T KOG4342|consen 489 FGFGDGGGG-------PTQEMLDKLRRIRSLSNTDGVLPRVQLGITVDEFFDAILKRTN-------------QGHDLPTW 548 (1078)
T ss_pred EEecCCCCC-------CcHHHHHHHHHhhcccccCCcccceeecCCHHHHHHHHHhhhc-------------cCCccccc
Confidence 55 44333 3456777763 3455443455788999 99999999987642 24579999
Q ss_pred cCCcccccccCCCceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccC
Q 002518 236 SGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHD 315 (913)
Q Consensus 236 ~gDffpyad~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHD 315 (913)
.||+| .++++|.|||++.+|+++|++|..|..+|.++++|...+ ....|| .+.|+.+||.++++||||
T Consensus 549 ~GELy------fEfHrGTYTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s---~dy~YP---~~qlq~LWr~~LLcQFHD 616 (1078)
T KOG4342|consen 549 VGELY------FEFHRGTYTTQAQIKKLMRECEIILHDVELLSSLASARS---ADYLYP---AAQLQHLWRLLLLCQFHD 616 (1078)
T ss_pred chheE------EEEecCceeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhc---ccccCc---HHHHHHHHHHHHHHHhcc
Confidence 99999 578899999999999999999999999999999986531 245677 478999999999999999
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEE
Q 002518 316 GVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVI 395 (913)
Q Consensus 316 aItGTsk~~V~~Dy~~rl~~a~~~~~~v~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 395 (913)
.++|++++-|++|..-.|.+.+..++.++..+++.|... +.+...+++
T Consensus 617 VlpGSCIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~as--------------------------------~s~ke~L~~ 664 (1078)
T KOG4342|consen 617 VLPGSCIEMVYKEAMPHYEDVRKHGNTLLSAAAAALCAS--------------------------------ESGKEGLLI 664 (1078)
T ss_pred cCCcHHHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHhcC--------------------------------CCCccceEE
Confidence 999999999999999999999999999999999888431 112346889
Q ss_pred EcCCCcceeEEEEEEecCCcEEEEcCCCeEeeEeeccccccCCcccccCcEEEEEEEecCCCceEEEEEEeCccCcCCCC
Q 002518 396 FNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAK 475 (913)
Q Consensus 396 fNpL~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~ 475 (913)
.|+|+|.|.+++.++-....+ ..-..++|.+|++... + ...
T Consensus 665 ~nTLpW~~~~v~~~~kp~k~~-------------------------------~~e~c~~~g~~ta~vt-----~---~~~ 705 (1078)
T KOG4342|consen 665 VNTLPWKRIEVMALPKPGKAH-------------------------------SLELCTVPGMGTAPVT-----P---PTS 705 (1078)
T ss_pred EeccccceeeeecccCCCCce-------------------------------eEEEeccCCccccCCC-----C---CCC
Confidence 999999999887765432211 1113578888865421 0 001
Q ss_pred cceeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEEcc-cCceE--------EE-EEEEEEeccCC
Q 002518 476 PVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISHI-NGSQN--------VV-EEEIDMYSSQG 545 (913)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~si~~k-~g~~~--------~~-~~~f~~Y~~~~ 545 (913)
|. |.. ...+.++|.|+.+||.+++ +|.|+|+.+. .|++. .+ .++|+.|++.+
T Consensus 706 p~---------------~~y--q~Dd~~~L~Ng~lrV~i~p-~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~P 767 (1078)
T KOG4342|consen 706 PV---------------FVY--QTDDSVTLDNGILRVKIDP-TGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDVP 767 (1078)
T ss_pred ce---------------eEE--ecCCeEEEECCEEEEEECC-CCceeeeeehhcccchhcccccccccCcccEEEecCCc
Confidence 11 101 1245689999999999997 8999999853 23322 12 37888887642
Q ss_pred --CceeE---EccCCCCCCcccCCceEEE-EECCcEEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeec
Q 002518 546 --SGAYL---FMPNGDAHPITEAGGLMVI-SKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLS 619 (913)
Q Consensus 546 --sgaYi---F~P~~~~~~~~~~~~~~~v-~~G~l~~~v~~~~~~~~~~~~i~~~irLy~~~~~~~~~~ie~~~~Vd~~~ 619 (913)
..||+ |.-. ..++......+.| .+|+++..|.+..+.. ..+.+.++|.|-.+.....=..|.|.++|+|.+
T Consensus 768 L~WqAWDte~ysle--~y~vl~k~k~v~v~~~g~lr~sv~v~~qIS-e~s~~k~~isL~~~~~~ak~~~V~f~teV~Whe 844 (1078)
T KOG4342|consen 768 LYWQAWDTEDYSLE--RYPVLGKAKTVAVGTEGGLRGSVWVLLQIS-ENSRLKQEISLDVGCTDAKLPYVRFHTEVHWHE 844 (1078)
T ss_pred cchhhhhhhhhcee--cceecCCCceEEeecCCCcceEEEEEEEcC-cccccceEEEEecccccccCCceeeEEEEeehh
Confidence 34553 3321 2344444444544 6899998887665321 356789999987664211112699999999986
Q ss_pred CCCCCceEEEEEEEeeCCCCeEEEeCCCCcccccccCCCCCCCcceecccceeE--EecCCCceeEEeeccccceeeccC
Q 002518 620 HNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAF--MQGSNGQRFSVHSRQSLGVASLKD 697 (913)
Q Consensus 620 ~~~~~~el~~rf~t~i~s~~~fyTDsnG~~~ikR~~~~~~pv~~nyYP~~s~~~--i~D~~~~~ltvltd~~~G~ssl~~ 697 (913)
.+|-+.|.|+.+|.|..+.|.. .|++.||||+-+..++...|.|...-| ..|- +.+++|||||+||. |...
T Consensus 845 ---~~KFLKVEFPv~irs~fAsYEt--QFGitkRPTHYNTSWDvAkFEVchhkfaDySe~-~~Gvs~LNDCKYGf-SthG 917 (1078)
T KOG4342|consen 845 ---AHKFLKVEFPVRIRSSFASYET--QFGITKRPTHYNTSWDVAKFEVCHHKFADYSEH-GFGVSLLNDCKYGF-STHG 917 (1078)
T ss_pred ---cCceEEeeccccccccchhhhh--hcccccCCccccccchhhHhHHHHhhhhhhhhc-ccceeeeccccccc-cccc
Confidence 6899999999999999888876 466999999888888888899877554 4554 58999999999995 6899
Q ss_pred CeEEEEEeecccccCC
Q 002518 698 GWLEIMLDRRLSRDDG 713 (913)
Q Consensus 698 G~lElml~Rr~~~DD~ 713 (913)
.-+.|.|.|++...|.
T Consensus 918 nlmrLSLLRsPKaPDA 933 (1078)
T KOG4342|consen 918 NLMRLSLLRSPKAPDA 933 (1078)
T ss_pred ceeeehhhcCCCCCCc
Confidence 9999999999998885
No 6
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=1e-44 Score=423.40 Aligned_cols=421 Identities=30% Similarity=0.439 Sum_probs=278.0
Q ss_pred eEEEEEcCCCcceeEEEEEEecCCcEEEEcCCCeEeeEeeccccccCCcccccCcEEEEEEEecCCCceEEEEEEeCccC
Q 002518 391 QSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVG 470 (913)
Q Consensus 391 ~~vvvfNpL~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~ 470 (913)
++|+|||||+|+|+++|+|+|..+.+.+.|.+|++|++|++|. ......++|.|.++||||||++|.|...+..
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~------~~~~~~~~l~f~~~vPalGy~~~~i~~~~~~ 74 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPE------PYSTGRYELLFVVDVPALGYKTYRIVEGESS 74 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEE------EEEEEEEEEEEEEEE-TTEEEEEEEEECSS-
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEec------cCCCCceEEEEEeccCCceeEEEEeeccccc
Confidence 5799999999999999999999999999999999999999982 2235678999999999999999999986543
Q ss_pred cCCCCcceeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEEc-ccCceEE--EEEEEEEeccC---
Q 002518 471 CDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISH-INGSQNV--VEEEIDMYSSQ--- 544 (913)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G~l~si~~-k~g~~~~--~~~~f~~Y~~~--- 544 (913)
..... .. .....++..|||++|+|+||+.+|.|.++++ ++|++.. ..++|..|.+.
T Consensus 75 ~~~~~---~~---------------~~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 75 EPSNE---AS---------------IAKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp -TTC-----C---------------EEETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred ccccc---ce---------------eecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 11000 00 0001134789999999999986699999975 5677776 67788888541
Q ss_pred ---------CCceeEEccCCCCCCcccCCceEEEEECCcEEEEEEeecc-------------cccCCceEEEEEEecCCC
Q 002518 545 ---------GSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRT-------------AWERSPISHSTRLYNGNN 602 (913)
Q Consensus 545 ---------~sgaYiF~P~~~~~~~~~~~~~~~v~~G~l~~~v~~~~~~-------------~~~~~~i~~~irLy~~~~ 602 (913)
.+|+|.|+| +||+...+.+.+.. ....+.++++++||++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~-----------------~g~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~ 199 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVE-----------------DGPLRSSIRVEYKFELPKNLSLVKRSEQTGSSRITQTIRLYKGSP 199 (457)
T ss_dssp TTE-SCCCGSEECCEEEE-----------------ESSSEEEEEEEEEEEEESCBECEEEESCEEEEEEEEEEEEETTES
T ss_pred ccccccccccCceEEEEe-----------------cCCceEEEEEEEEEeccCCcEEEEEEEeccceEEEEEEEEecCce
Confidence 234444444 45555554444321 013457999999999987
Q ss_pred ccceeEEEEEEEEeeecCCCCCc-eEEEEEEEeeCCCCeEEEeCCCCcccccccCCCCCCCcceecccceeEEecCCCce
Q 002518 603 MIQEFLIEKEYHVELLSHNFNDR-ELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQR 681 (913)
Q Consensus 603 ~~~~~~ie~~~~Vd~~~~~~~~~-el~~rf~t~i~s~~~fyTDsnG~~~ikR~~~~~~pv~~nyYP~~s~~~i~D~~~~~ 681 (913)
+|||+++||+... .++ +|+++|+|+|.++..||+|++|+++.+|+++.+.|+++|||||++.+||.|++ .+
T Consensus 200 -----~ie~~~~vdn~~~--~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~ 271 (457)
T PF07748_consen 200 -----RIEFETEVDNWAE--DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHPNTPWEANYYPVPSHAFVDDSD-SR 271 (457)
T ss_dssp -----SEEEEEEEEE-TT--SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESSTTTTCGGG-EEECSCCEEEECS-EC
T ss_pred -----EEEEEEEeccccc--CCceeEEEEeecCCCCCCEEEECCCCeEEecCCccccCCcccccCCCcceEEEEcCC-CC
Confidence 7999999994432 333 79999999999999999999886554447777899999999999999999985 56
Q ss_pred eEEeeccccceeecc-CCeEEEEEeecccccCCCCCCcCcccCcceeEEEEEEEeeccCCCcccCCCCcccCcchhhhhh
Q 002518 682 FSVHSRQSLGVASLK-DGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLT 760 (913)
Q Consensus 682 ltvltd~~~G~ssl~-~G~lElml~Rr~~~DD~rG~ge~l~d~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~ 760 (913)
|+|+||+++|++++. +|+||||||||+..||++|++ .|+|+.......... . ...
T Consensus 272 l~i~~d~~~g~~~~~~~g~l~ltL~R~~~~D~g~~~~-----------~~~l~~~~~~~~~~~-~------------~~~ 327 (457)
T PF07748_consen 272 LAILNDGKYGYESLDQDGELELTLLRRPSQDDGRGVF-----------RYALYPHSGSWDEAD-V------------VQE 327 (457)
T ss_dssp EEEEESS-EEEEECTTTTEEEEEEEEEBSCG-SSSEE-----------CCEEEEEEEEEEEEE-C------------HHC
T ss_pred EEEEcCCCcceEeccCCCeEEEEEeecccccCCccEE-----------EEEEEEecccccccc-c------------hhh
Confidence 999999999999887 999999999999999999988 355555443210000 0 111
Q ss_pred cccccCcceeeeccCCCCCcCCCCCCCcCCCC---CCCCCceeEEee--ecCCCCCCCCCCCCccceEEEEEeeccCccc
Q 002518 761 GAHLNYPLHAFISKKPQELSVQPPPRSFSPLA---GSLPCDLHIVNF--KVPRPSKYSQQSPDDSRFVLILQRRYWDSSY 835 (913)
Q Consensus 761 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~---~~LP~nvhLltl--~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~ 835 (913)
+..+++|+.+|..... .......++++. ..+|+++|+.+| ..+.+.... ....-++|||+.+..+.-
T Consensus 328 a~~l~~Pl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~----~~~~~~~ilR~~n~~~~~ 399 (457)
T PF07748_consen 328 AYELNQPLIVFNSSNI----QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDG----SDWSDGLILRLYNPSGKE 399 (457)
T ss_dssp HHHHTS-EEEESS--T----TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTT----SEEETCEEEEEEESSSST
T ss_pred hhhccCccEEeecccc----ccccccCCCcccccccccccccCCCccccccccccccc----ccccCCEEEEEEecCCCc
Confidence 2368899987721111 011123444443 348999999998 222211100 000124688887765543
Q ss_pred ccCCCCc-cccccccccchhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEE
Q 002518 836 CRKGRSQ-CVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYK 906 (913)
Q Consensus 836 ~~~~~~~-~~~~~~~~~~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~Pmeirtf~ 906 (913)
....... |.......+.+.+||....+.+++|+++..... .....|+|+|||||||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~lle~~~~~~i~e~s~~~~~~--------------~~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 400 TEASLDFLSKPLSGAEVNLVNLLEEPDIEEIEETSLSDPSE--------------SNSVELTLKPFEIKTFR 457 (457)
T ss_dssp CCCTTCCTSCCTEEEEEEEESTTSSSCEEEEEEE-SEEEES--------------CGGTCSEE-TTEEEEEE
T ss_pred cccccccCCccceeEEEEecccccCCCccceEeeccCCCCC--------------CCEeEEEEeCcEEEEEC
Confidence 2211111 111112456778999988889999999432111 12347899999999996
No 7
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-33 Score=341.52 Aligned_cols=490 Identities=18% Similarity=0.220 Sum_probs=342.4
Q ss_pred ChhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCCCc
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~ 80 (913)
++|+.+|+||+.+.||...|+.|.||+||.|+++|||+..+|++.|+++++.|++.+.++.+ .|.|++. +|++
T Consensus 292 srq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~---~~~w~~~----dg~e 364 (943)
T COG0383 292 SRQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHD---LLRWRWK----DGTE 364 (943)
T ss_pred hhhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhccCCChh---Hheeecc----cccc
Confidence 48999999999999999999999999999999999999999999999999999999988874 7999998 6999
Q ss_pred eEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 160 (913)
+++|+.+. + || .| ..+.. .+++... .....|+.
T Consensus 365 ~~~hds~~---------~-----~~-~d----------------------~v~~~-------~~~r~~~---~~~~~~~~ 397 (943)
T COG0383 365 NLAHDSIC---------G-----CS-SD----------------------PVHRE-------MEYRFEK---INQVGLYL 397 (943)
T ss_pred cceeecCC---------C-----Cc-cc----------------------HHHHH-------HHhhhhh---hccceeEE
Confidence 99998752 1 10 11 11111 1222221 34556677
Q ss_pred ec-CCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCc
Q 002518 161 LG-DDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDF 239 (913)
Q Consensus 161 ~G-~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDf 239 (913)
+| +|+... +.-+.+++ .. ...+..+|.....+... .....|++.|++
T Consensus 398 ~g~gd~ggg------~~~dm~~~---~~-----------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~el 445 (943)
T COG0383 398 YGYGDGGGG------PSIDMLEN---PE-----------LPIAEGVFNTGVEKKTS------------TLELVPTWDGEL 445 (943)
T ss_pred eeccCCCCC------CCHHHHhc---cc-----------cccccceeeecceeeee------------ecccccccchhh
Confidence 77 344432 11222221 10 12223333332221100 124578999999
Q ss_pred ccccccCCCceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccCCCCC
Q 002518 240 FTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTG 319 (913)
Q Consensus 240 fpyad~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHDaItG 319 (913)
| .++++|.|||....|.++|.+|..|+.+|.+.+.+.... ..+..|| .+.+.++|+.+.++|+||.++|
T Consensus 446 y------~E~hrg~~t~~~~~k~~~r~~e~~l~d~e~~~~~~~~~~--~~~~~~~---~~~~~~~w~~~l~~qfhdvlpg 514 (943)
T COG0383 446 Y------LELHRGTYTTQAKTKKLNRESEFLLEDAEGISVEAAIIE--GDRVTYP---YELLNELWKGLLLAQFHDVLPG 514 (943)
T ss_pred h------hhccCceeehhhhhhhhccccccceecccccchhhhhhc--cccccCc---hhhHHHHHHHhhhhhceeeccc
Confidence 8 577889999999999999999999999999999864321 1124455 4789999999999999999999
Q ss_pred CchhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcC
Q 002518 320 TAKDHVVL-DYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNP 398 (913)
Q Consensus 320 Tsk~~V~~-Dy~~rl~~a~~~~~~v~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNp 398 (913)
|+...|+. |....+......+..++..+++.|.+. ....+.++|+
T Consensus 515 s~i~~vy~~~a~~~~~~~~~~~~~i~~~~~~~l~~~----------------------------------~~e~~~~~~~ 560 (943)
T COG0383 515 SSIKEVYSYDALPLLEVVQKGASKIAELALKVLSSQ----------------------------------CLENLFVKNT 560 (943)
T ss_pred cceeeechhhHHHHHHhhhccchhhhhhhhhhhhhc----------------------------------cccceEEEee
Confidence 99999999 988888888888888888877766221 1235789999
Q ss_pred CCcceeEEEEEEecCCcEEEEcCCCeEeeEeeccccccCCcccccCcEEEEEEEecCCCceEEEEEEeCccCcCCCCcce
Q 002518 399 LEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVK 478 (913)
Q Consensus 399 L~~~r~~~V~v~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~ 478 (913)
+.|.+. .++|.|..+..++.+.+. ...++|++|...++++.... .+
T Consensus 561 ~~~~~~----------~~~v~d~~~~~~~~~~~~-----------------~~ed~~~~g~~~i~~~~~~~-----~~-- 606 (943)
T COG0383 561 LSWNGI----------SLQVLDKTSGGIYTSQLT-----------------ALEDVGDIGNEYIYSQPTKT-----EP-- 606 (943)
T ss_pred ccCCcc----------eEEEEEcCCCceehhhhh-----------------hhhhcCCcccceeEeccccc-----cc--
Confidence 999981 456677666555544321 12368999999888732211 00
Q ss_pred eeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCc-eEEEEEcccCceEEEEEEEEEeccCCCceeEEccCCCC
Q 002518 479 LKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHG-LLQKISHINGSQNVVEEEIDMYSSQGSGAYLFMPNGDA 557 (913)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~v~fd~~~G-~l~si~~k~g~~~~~~~~f~~Y~~~~sgaYiF~P~~~~ 557 (913)
.....+++..++.++ ++| .+..+.++ -.+ ..||.-.+.-..
T Consensus 607 ----------------------~~~~~~~~~~~~~~~-~~gn~~~~~~~~----------~~~-----~~~w~i~~~~~~ 648 (943)
T COG0383 607 ----------------------ETVIEEKEWKRLIIN-DTGNQLALIEDE----------PAY-----WDAWNIDKFLEE 648 (943)
T ss_pred ----------------------cccccccchheeecc-CCCcceeeeecc----------cce-----echhcchhhhhh
Confidence 111223334444444 466 33322221 111 233332222111
Q ss_pred --CCcccCCceEEEEECCcEEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCCceEEEEEEEee
Q 002518 558 --HPITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDI 635 (913)
Q Consensus 558 --~~~~~~~~~~~v~~G~l~~~v~~~~~~~~~~~~i~~~irLy~~~~~~~~~~ie~~~~Vd~~~~~~~~~el~~rf~t~i 635 (913)
..+.... ...++.|||+.++++... +..+.++|.|++|++++ +|+|+++|||.. .+|.+++.|++++
T Consensus 649 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~i~~~i~l~~~s~-----~l~~~t~vd~q~---~~~~lrv~fp~~~ 717 (943)
T COG0383 649 ELLALTALP-EEAIENGPLVRTVRVSKE--LTESTITQKVTLYKGSP-----RLDFKTEVDNQV---RDHRLRVLFPTDI 717 (943)
T ss_pred hhhhhhccc-cchhccccceeeeeeeee--ccceEEEEEEEEecCCc-----eeEEEEEEEccc---cceEEEEEecccc
Confidence 1111112 335789999999998754 44678999999999998 899999999875 7999999999999
Q ss_pred CCCCeEEEeCCCCcccccccCCCCCCCccee--cccceeEEecCCCce--eEEeeccccceeeccCCeEEEEEeecc
Q 002518 636 DNKRIFYSDLNGFQMSRRETYDKIPLQGNYY--PMPALAFMQGSNGQR--FSVHSRQSLGVASLKDGWLEIMLDRRL 708 (913)
Q Consensus 636 ~s~~~fyTDsnG~~~ikR~~~~~~pv~~nyY--P~~s~~~i~D~~~~~--ltvltd~~~G~ssl~~G~lElml~Rr~ 708 (913)
+++... .| -.|+.++|+++.+..++.+.+ |+..++.+.|.. .+ +++++|++||++ ..++.|.|+|.|..
T Consensus 718 ~s~~a~-~d-~~fg~v~Rp~~~~~~W~~a~~e~p~~~~vdls~~~-~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~ 790 (943)
T COG0383 718 ASDFAT-AD-IPFGVVERPTHPNTSWENARFEVPLQKFVDLSDGE-YGVTVSLLGDCKYGIS-THGNLLALTLLRSV 790 (943)
T ss_pred ccccee-cc-ccceeeccCCCCchhhhcccCcchhhccccccCCc-cceeEeccCCcceeEe-ccCCEEEEEecccc
Confidence 998754 35 789999999987766555554 455677777764 55 999999999975 69999999999998
No 8
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=99.97 E-value=4.2e-32 Score=294.96 Aligned_cols=177 Identities=33% Similarity=0.615 Sum_probs=134.7
Q ss_pred ChhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHHhhcCceEEEEEeCCCCCCCCc
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~ 80 (913)
||||++||+|++++||+.|++||+||+||||+++|+||+++||++++++|+++++++.++..+.++|+|+|+ +|++
T Consensus 96 irql~~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il~~~Gi~~~v~~r~~~~~~~~~~~~~~~~F~W~g~----dGs~ 171 (275)
T PF01074_consen 96 IRQLLYGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQILKQFGIKYFVIWRISWNDKNPFKANPQSEFYWQGP----DGSE 171 (275)
T ss_dssp HHHHHHHHHHHHHHHTG--SEEEESSSSSB-TCHHHHHHTTT-SEEEESSS-HHHHHHHHHTTSSEEEEE-T----TSTE
T ss_pred HHHHhhhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHHhccCcceEEEeccccccccccccCCCceEEEecC----CCcc
Confidence 689999999999999999999999999999999999999999999999999999999998889999999999 6899
Q ss_pred eEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 160 (913)
||||++|.+.|+ +..|++| ++++.+++++++.+..+.++++|+|
T Consensus 172 ilt~~~~~~y~~--------~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~ 215 (275)
T PF01074_consen 172 ILTHVLPNYYYG--------PWYGSEF----------------------------EDADELLEQLRKLAKKYYTNNILIP 215 (275)
T ss_dssp EEEEE-TST-TS--------HHTTCCH----------------------------HHHHHHHHHHHHHHCCSSSSEEEEE
T ss_pred eeEEecccCCCC--------CCCCccc----------------------------ccHHHHHHHHHHHHHhcCCCceEEE
Confidence 999999963331 2233211 3567788899999999999999999
Q ss_pred ecCCCCCCChhhHHHHHHhHHHHHHHHhcC--CCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcc-cC
Q 002518 161 LGDDFRYTTINEAEAQFRNYQLLFDYINSN--PSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSL-SG 237 (913)
Q Consensus 161 ~G~Df~y~~~~~a~~~~~n~~kli~~iN~~--~~~~~~i~~sT~~~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~-~g 237 (913)
+|+| +.++..+++++++||.. ....++++|||+++||++|+++ ..+|++ +|
T Consensus 216 ~G~d---------~~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~-----------------~~~p~~~~~ 269 (275)
T PF01074_consen 216 YGDD---------DDGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE-----------------SELPVHYHG 269 (275)
T ss_dssp EEEE---------HHHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC-------------------B-EE-ES
T ss_pred eecC---------CCCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc-----------------cCCCcccCC
Confidence 9988 12345566666666622 1236899999999999999874 368999 99
Q ss_pred Cccccc
Q 002518 238 DFFTYA 243 (913)
Q Consensus 238 Dffpya 243 (913)
||||||
T Consensus 270 df~~Y~ 275 (275)
T PF01074_consen 270 DFPPYA 275 (275)
T ss_dssp -B-S-E
T ss_pred CCCCCC
Confidence 999996
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.88 E-value=2.1e-23 Score=181.34 Aligned_cols=80 Identities=41% Similarity=0.603 Sum_probs=67.7
Q ss_pred CceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccCCCCCCchhhHHH
Q 002518 248 DYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVL 327 (913)
Q Consensus 248 ~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHDaItGTsk~~V~~ 327 (913)
+||+|||||||.+|+++|.+|++|++||+|++++.... .+..+| ...|+++|+.|+++||||+||||++++|++
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~---~~~~~~---~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~ 74 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLG---NGGDYP---QEELEKAWKALLLNQFHDAITGTSIDSVYD 74 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH-----HSG-H---HHHHHHHHHHHHCTTBTTTTTS-S-HHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhc---cCcccc---HHHHHHHHHHHHHhccCCCCCCcChHHHHH
Confidence 58999999999999999999999999999999986541 123454 478999999999999999999999999999
Q ss_pred HHHHHH
Q 002518 328 DYGTRM 333 (913)
Q Consensus 328 Dy~~rl 333 (913)
||..||
T Consensus 75 d~~~rl 80 (80)
T PF09261_consen 75 DYLRRL 80 (80)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.85 E-value=1.3e-21 Score=169.72 Aligned_cols=79 Identities=42% Similarity=0.571 Sum_probs=70.6
Q ss_pred ceeeeecCchhhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhcccCCCCCCchhhHHHH
Q 002518 249 YWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLD 328 (913)
Q Consensus 249 yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~a~~~l~l~QhHDaItGTsk~~V~~D 328 (913)
||+|||||||.+|+++|++|++|+.+|.+++++.... .+..|| .+.|+.+||.|+++||||+||||++++|++|
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~---~~~~~~---~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d 74 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLL---LGYKYP---SEQLEELWKALLLNQFHDAITGTSIDEVYDD 74 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCc---HHHHHHHHHHHHHhcCcccCCccCcHHHHHH
Confidence 7999999999999999999999999999999875431 245566 4679999999999999999999999999999
Q ss_pred HHHHH
Q 002518 329 YGTRM 333 (913)
Q Consensus 329 y~~rl 333 (913)
|..|+
T Consensus 75 ~~~r~ 79 (79)
T smart00872 75 YETRL 79 (79)
T ss_pred HHHhC
Confidence 99875
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=98.74 E-value=2.5e-09 Score=132.14 Aligned_cols=260 Identities=17% Similarity=0.137 Sum_probs=175.1
Q ss_pred hhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHH--H-------HHhhcCceEEEEEeC
Q 002518 2 HQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELK--K-------ELALHQNLEYIWRQS 72 (913)
Q Consensus 2 dQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k--~-------~~~~~~~~eF~Wr~~ 72 (913)
+.++.|..+.. .+|..++.||.+|.||+..++|+++..+|++.+.|+|+.-..- + .-....-.|..|.++
T Consensus 102 rn~l~~~~~~~-~~~~~~~~g~~~d~~g~~~qa~~~~~~~~i~~~~f~r~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~ 180 (943)
T COG0383 102 RNLLIGEFDAE-RFGKAMKLGYFPDTFGNLGQAPQLYENAGISAVAFGRGAALIGFGQLVLFELLEAYGSDFSEITWSEP 180 (943)
T ss_pred eeeecchHHHH-HhhhhhccccccccchhhhhhhHHHHhcCCchhhcccccchhhcccchhhhhhhHhcCcCcccccccC
Confidence 56778866555 6669999999999999999999999999999999999974211 0 011123346667666
Q ss_pred CCCCCCCceEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCCh-hhHHHHHHHHHHHHHhhccc
Q 002518 73 WDTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQ-ENVQERALKLLDQYKKKSTL 151 (913)
Q Consensus 73 ~~~~~~s~i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~-~nv~~r~~~l~~~~~~~~~~ 151 (913)
++++++-+.++. .|.-+. .. .... .-++-....-++..++++
T Consensus 181 ----~~~~~l~il~~~-~y~~g~---------------------------~I---~~~ghahid~aWlw~l~et~r~a-- 223 (943)
T COG0383 181 ----DGSQVLGILLAN-GYSNGN---------------------------EI---PAVGHAHIDTAWLWPLDETERKA-- 223 (943)
T ss_pred ----CchhhHHHHHHH-Hhhccc---------------------------cc---cccchhhHHHHHhccHHHHHHHH--
Confidence 466666666664 332111 00 0011 223334444455666666
Q ss_pred ccCCeEEEEecCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCC----HHHHHHHHHHHhhhccCCCCCCCCCC
Q 002518 152 YRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGT----LDDYFRTLREEADRINYSRPGEIGSG 227 (913)
Q Consensus 152 ~~tn~il~p~G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT----~~~Yf~al~~~~~~~~~~~~~~~~~~ 227 (913)
.+..++++.|+|..+. +.+....+++.|...+ +....|+- ...||......+
T Consensus 224 -~ts~~~~~~l~D~~p~--------~~~~~s~~~~y~~l~~-d~p~l~~~~~v~~~~~~~~~g~~v-------------- 279 (943)
T COG0383 224 -STSFSLVMNLMDHYPV--------QKFVQSAAALYNWLKP-DVPFLFSRPAVEFEQWEIVGGMWV-------------- 279 (943)
T ss_pred -hhhhhheecccccChh--------hhhhhhHHHHHHHhcC-ccHHHhhcccccccceEEeecccc--------------
Confidence 5777889999998763 5777777888776643 22223333 333333322211
Q ss_pred CcCCCCcccCCcccccccCCCc---e---eeeecCchhhhhHHHHHHHHH-HHHHHHHH-------HHhhhccccccccC
Q 002518 228 QVEGFPSLSGDFFTYADRQQDY---W---SGYYVSRPFFKAVDRVLEQTL-RATEMMVA-------LLLGYCQRAQCEKL 293 (913)
Q Consensus 228 ~~~~~p~~~gDffpyad~~~~y---W---tGyyTSRp~~K~~~R~~e~~L-~~aE~L~s-------la~~~~~~~~~~~~ 293 (913)
....++.+||+.. +...| | -..-+||..+|..+-..+..| +.+|++.. +|+. .+..+
T Consensus 280 -e~d~n~~sGEsls---rq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn-----~tn~~ 350 (943)
T COG0383 280 -EEDLNTPSGESLS---RQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWN-----DTNRF 350 (943)
T ss_pred -cccCCccccchhh---hhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchh-----hccCC
Confidence 1346788888763 22223 1 244589999999998888887 67888876 5554 36677
Q ss_pred chhhHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 002518 294 PMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHT 335 (913)
Q Consensus 294 ~~~~~~~L~~a~~~l~l~QhHDaItGTsk~~V~~Dy~~rl~~ 335 (913)
| .+.+.-+|+....++.||++|||+.+.|+.+...|...
T Consensus 351 P---h~~~~w~~~dg~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 351 P---HDLLRWRWKDGTENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred C---hhHheeecccccccceeecCCCCcccHHHHHHHhhhhh
Confidence 7 47888899999999999999999999999998888876
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=85.68 E-value=0.79 Score=51.95 Aligned_cols=51 Identities=20% Similarity=0.421 Sum_probs=39.1
Q ss_pred hhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCH
Q 002518 2 HQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHY 53 (913)
Q Consensus 2 dQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~ 53 (913)
.|+..|.+.+++.||++|+..|.+- .+.+..+..+++++||+++++.--.-
T Consensus 148 ~Qi~~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l~~~Gi~~~i~d~~~~ 198 (360)
T PF03065_consen 148 AQIEMGREYFKKHFGRRPRGFWLPE-CAYSPGLEEILAEAGIRYTILDGHQL 198 (360)
T ss_dssp HHHHHHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHHHHTT--EEEEECHHH
T ss_pred HHHHHHHHHHHHHhCCCCCceECcc-cccCHHHHHHHHHcCCEEEEECcHHh
Confidence 4899999999999999999999986 68999999999999999999864433
No 13
>KOG4120 consensus G/T mismatch-specific thymine DNA glycosylase [Replication, recombination and repair]
Probab=55.15 E-value=50 Score=35.73 Aligned_cols=104 Identities=17% Similarity=0.302 Sum_probs=63.9
Q ss_pred hhhHHHHHHHhHhC-CCCceeEeeCCCCCchHHHHHHHHcCCceeeEeecCHHHHHHH---hhcCceEEEEEeCCCCCCC
Q 002518 3 QIMEGNMWLNDTIG-FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKEL---ALHQNLEYIWRQSWDTEET 78 (913)
Q Consensus 3 Ql~~Gh~~l~~~fG-~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~---~~~~~~eF~Wr~~~~~~~~ 78 (913)
.|-+|-|-|.+++- ++|+|| +|.+++.|++-..+ ..-|.++|=|++.. -++
T Consensus 223 E~~eG~RIL~eKlqryrP~Va-----------------------vFnGK~I~E~fsk~~~g~~~K~f~FG~QP~k--~~d 277 (426)
T KOG4120|consen 223 EMQEGARILYEKLQRYRPQVA-----------------------VFNGKGIWEEFSKMLTGKLPKTFVFGWQPEK--FGD 277 (426)
T ss_pred HHhcchHHHHHHHHhhCcceE-----------------------EEcCcchHHHHHHHhhccCcceeEeccCccc--CCC
Confidence 36678888888886 578886 44566667654433 22478999998753 257
Q ss_pred CceEEeeCCCcccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEE
Q 002518 79 SDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLL 158 (913)
Q Consensus 79 s~i~th~~p~y~Y~~p~~c~p~~~~c~~fdf~r~~g~~~~~~~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il 158 (913)
++.|+.+||. | .+=|-|| |..-+..|+-....++.++.+....+..-..+.
T Consensus 278 t~tfv~Vmps-S----------SaRcAq~------------------pra~dKv~~y~~lk~~rd~l~giv~h~d~qe~~ 328 (426)
T KOG4120|consen 278 TNTFVGVMPS-S----------SARCAQY------------------PRAEDKVNLYNLLKEERDRLRGIVKHADVQEVQ 328 (426)
T ss_pred cceEEEEccC-c----------chhhhcC------------------ChhhhhhhHHHHHHHHHHHhhcccccccceeeE
Confidence 9999999994 1 1223333 212233444455666777777665544444454
Q ss_pred EE
Q 002518 159 VP 160 (913)
Q Consensus 159 ~p 160 (913)
++
T Consensus 329 yt 330 (426)
T KOG4120|consen 329 YT 330 (426)
T ss_pred EE
Confidence 44
No 14
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=50.17 E-value=53 Score=41.35 Aligned_cols=70 Identities=19% Similarity=0.168 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceE-EEeCCHHHHHHHHHHHh
Q 002518 136 ERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAE-AKFGTLDDYFRTLREEA 213 (913)
Q Consensus 136 ~r~~~l~~~~~~~~~~~~tn~il~p~G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~-i~~sT~~~Yf~al~~~~ 213 (913)
.-+++|+.....+...-..=.+|+|-|-.-+..+..- ..+++.+...-+ . |+. .+-|||..||.-|+..+
T Consensus 991 tiIDefIss~e~KWgQ~S~vvlLLPHGyEGQGPdHSS-----aRiERfLqlcAe-~--nm~Va~psTPA~yFHLLRrqa 1061 (1228)
T PRK12270 991 TIIDEFISSGEAKWGQRSGVVLLLPHGYEGQGPDHSS-----ARIERFLQLCAE-G--NMTVAQPSTPANYFHLLRRQA 1061 (1228)
T ss_pred HHHHHHHhhhHhhhccccceEEEccCCcCCCCCCcch-----HHHHHHHHhhcc-C--CeEEEccCChHHHHHHHHHHh
Confidence 3456676665555443334467899995444333211 234443332222 2 444 46799999999998764
No 15
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=47.99 E-value=22 Score=40.69 Aligned_cols=46 Identities=24% Similarity=0.554 Sum_probs=43.1
Q ss_pred hhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHHcCCceeeEe
Q 002518 3 QIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQ 49 (913)
Q Consensus 3 Ql~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~ 49 (913)
|+..|.+=-.++||..|+--|.| ==++.+.++.+|+..||++++.-
T Consensus 162 Qi~~g~~~ye~~fg~~P~GiWlP-Ecay~pgie~~l~~~Gi~yf~vd 207 (504)
T COG1543 162 QILTGIELYEEHFGLAPKGIWLP-ECAYAPGIERILKDAGIEYFFVD 207 (504)
T ss_pred HHHHHHHHHHHHhCCCCCceech-hhccccchHHHHHhcCceEEEec
Confidence 88899998899999999999999 67999999999999999999986
No 16
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B.
Probab=31.13 E-value=6.7e+02 Score=26.67 Aligned_cols=25 Identities=12% Similarity=0.264 Sum_probs=20.1
Q ss_pred eEEeeceEEEEEeccCceEEEEEcc
Q 002518 503 ADIRNRHQILSFDVRHGLLQKISHI 527 (913)
Q Consensus 503 ~~ieN~~~~v~fd~~~G~l~si~~k 527 (913)
++|||+.++++|+...|.|+++..|
T Consensus 2 v~ven~~~~~~~s~~GG~i~~~~Lk 26 (270)
T PF14849_consen 2 VTVENDLFKVTFSSKGGRIKSVELK 26 (270)
T ss_dssp EEEE-SS-EEEEETBTTEEEEEEEE
T ss_pred EEEECCCEEEEEECCCCeEEEEEcC
Confidence 5799999999999888999998743
No 17
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=30.86 E-value=7.3e+02 Score=27.27 Aligned_cols=48 Identities=17% Similarity=0.056 Sum_probs=35.5
Q ss_pred hhhhHHHHHHHhHhCCCCceeEeeCCCCCchHHHHHHHH-cCCceeeEeecC
Q 002518 2 HQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRR-MGFENMLIQRTH 52 (913)
Q Consensus 2 dQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~-~G~~~~v~~Ri~ 52 (913)
++|..+.+-|++..|.. -.||.- -.+|..++.|+++ .||.+..-+..+
T Consensus 139 ~~i~~s~~~i~~~tG~~-P~G~~~--~~~s~~T~~LL~e~~Gf~Y~sd~~~d 187 (297)
T TIGR03212 139 EHIAEAIRLHTEVTGER-PLGWYT--GRTSPNTRRLVAEEGGFLYDADSYAD 187 (297)
T ss_pred HHHHHHHHHHHHHhCCC-CceEEC--CCCChhHHHHHHHhcCceEeCchhhc
Confidence 45677888788777866 456753 3689999999998 999886655443
No 18
>PF06045 Rhamnogal_lyase: Rhamnogalacturonate lyase family; InterPro: IPR010325 Rhamnogalacturonate lyase degrades the rhamnogalacturonan I (RG-I) backbone of pectin []. This family contains mainly members from plants, but also contains the plant pathogen Erwinia chrysanthemi.
Probab=26.90 E-value=7.2e+02 Score=25.68 Aligned_cols=30 Identities=20% Similarity=0.286 Sum_probs=24.0
Q ss_pred CceeEEeeceEEEEEeccCceEEEEEcccCc
Q 002518 500 GDVADIRNRHQILSFDVRHGLLQKISHINGS 530 (913)
Q Consensus 500 ~~~~~ieN~~~~v~fd~~~G~l~si~~k~g~ 530 (913)
....+|+|+.+.|+|+...|.++.|. -+|.
T Consensus 15 ~~~VvldNGiVqVtls~p~G~VtgIk-YnGi 44 (203)
T PF06045_consen 15 GRQVVLDNGIVQVTLSKPGGIVTGIK-YNGI 44 (203)
T ss_pred CCEEEEECCEEEEEEcCCCceEEEEE-ECCE
Confidence 35689999999999997679999886 2454
No 19
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=23.37 E-value=1.1e+03 Score=26.53 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=23.3
Q ss_pred ceeEEeeceEEEEEeccCceEEEEEcc
Q 002518 501 DVADIRNRHQILSFDVRHGLLQKISHI 527 (913)
Q Consensus 501 ~~~~ieN~~~~v~fd~~~G~l~si~~k 527 (913)
..++|+|+.++++|+...|.|+++..|
T Consensus 74 ~~i~v~td~~~~~is~~Gg~i~~~~Lk 100 (366)
T TIGR03593 74 KRITVKTDVLRASISTKGGDIDSLELK 100 (366)
T ss_pred CeEEEECCeEEEEEeCCCceeeeeccc
Confidence 468899999999999877799998854
No 20
>PF02929 Bgal_small_N: Beta galactosidase small chain; InterPro: IPR004199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Beta-galactosidase enzymes (3.2.1.23 from EC) belong to several glycoside hydrolase families: GH1 from CAZY, GH2 from CAZY, GH35 from CAZY and GH42 from CAZY. Beta-galactosidase is the product of the lac operon Z gene of Escherichia coli. This enzyme catalyses the hydrolysis of the disaccharide lactose to galactose and glucose, and can also convert lactose to allolactose, the inducer of the lac operon. This domain is found in single chain beta-galactosidases, which are comprised of five domains. The active site is located in a deep pocket built around the central alpha-beta barrel, with the other domains conferring specificity for a disaccharide substrate. This entry represents domain 5 of glycoside hydrolase family 2, which contains an N-terminal loop that swings towards the active site upon the deep binding of a ligand to produce a closed conformation []. This domain is also found in the amino-terminal portion of the small chain of dimeric beta-galactosidases.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1JZ3_D 1JYY_H 1GHO_P 3VD9_B 3I3E_B 3T0B_A 3T09_C 1F4A_D 3VDC_C 3VDB_D ....
Probab=21.69 E-value=1e+03 Score=25.66 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=21.4
Q ss_pred EeeceEEEEEeccCceEEEEEcccCceE
Q 002518 505 IRNRHQILSFDVRHGLLQKISHINGSQN 532 (913)
Q Consensus 505 ieN~~~~v~fd~~~G~l~si~~k~g~~~ 532 (913)
|.++..++.||..+|.|.++.. +|++.
T Consensus 2 V~g~~f~~~Fdk~~G~l~s~~~-~g~~l 28 (276)
T PF02929_consen 2 VSGKDFSYVFDKKTGTLTSYKY-NGKEL 28 (276)
T ss_dssp EEETTEEEEEETTTTCEEEEEE-TTEEE
T ss_pred CccCCEEEEEECCCCeEEEEEE-CCEEe
Confidence 6778889999999999999874 45443
Done!