Query 002518
Match_columns 913
No_of_seqs 241 out of 1128
Neff 8.1
Searched_HMMs 29240
Date Tue Mar 26 15:47:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002518.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1239-1242//hhsearch_pdb/002518hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 1.0 1 1 1370.4 85.7 840 1-911 179-1045(1045)
2 2wyh_A Alpha-mannosidase; hydr 1.0 1 1 855.9 70.8 712 1-910 123-923 (923)
3 3lvt_A Glycosyl hydrolase, fam 1.0 1 1 770.4 71.2 717 1-908 104-898 (899)
4 1o7d_D Lysosomal alpha-mannosi 1.0 1 1 449.9 26.8 250 502-775 2-272 (282)
5 1o7d_A Lysosomal alpha-mannosi 1.0 1 1 333.1 19.1 175 1-194 120-297 (298)
6 1o7d_C Lysosomal alpha-mannosi 1.0 1 1 222.0 16.6 149 300-468 2-150 (159)
7 1o7d_B Lysosomal alpha-mannosi 1.0 1 1 169.1 7.4 75 193-283 1-75 (84)
8 1o7d_E Lysosomal alpha-mannosi 1.0 1 1 149.0 9.0 111 785-913 2-124 (126)
9 1k1x_A 4-alpha-glucanotransfer 1.0 1 1 56.0 4.5 49 1-51 99-147 (659)
10 3p0b_A TT1467 protein; glycosi 1.0 1 1 45.2 18.5 264 2-324 180-493 (540)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=1.00 E-value=1 Score=1370.41 Aligned_cols=840 Identities=38% Similarity=0.613 Sum_probs=699.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCC
Q ss_conf 91366789999967099985017509999866789999983996056740588899998542755899974799999985
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSD 80 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~leF~Wr~~~~~~~~s~ 80 (913)
||||++||+|++++||+.|++||+|||||||+++|+||++|||++++|+|++|++|+.|+..+.+||+|+|+|+..+|++
T Consensus 179 irQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~ 258 (1045)
T 3bvx_A 179 LLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTA 258 (1045)
T ss_dssp HHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTC
T ss_pred HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCE
T ss_conf 99999999999998299972587279998658999999975997599941442000001236784599837777999994
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 27830798656899877999951001221235874334698888997798112999999999999861254467849997
Q 002518 81 IFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 160 (913)
Q Consensus 81 ifth~lp~y~Y~~p~~c~p~~~~c~~fDf~~~~g~~~~~c~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~iL~p 160 (913)
||||++|+|+|++||+|||+|+|||+|||.+++|+++ .|||.++|..++++|+++|++.+++++++++.+|+++++|+|
T Consensus 259 Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~-~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~ 337 (1045)
T 3bvx_A 259 LFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGL-SCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIP 337 (1045)
T ss_dssp EEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSC-CCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEE
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 8998615666576655688855331212022456544-575567765562799999999999999986103578869999
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 04998999813379999969999999943999742899389889999999975101478998778997678975238732
Q 002518 161 LGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFF 240 (913)
Q Consensus 161 ~G~Df~y~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~sT~s~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDff 240 (913)
+|+||+|.++.+|..+|+||++||+|+|++++..++++|||++|||++++++... ....||+++||||
T Consensus 338 ~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~~yf~~l~~~~~~------------~~~~lp~~~Ge~~ 405 (1045)
T 3bvx_A 338 LGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERA------------GQAEFPTLSGDFF 405 (1045)
T ss_dssp EEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHT------------TSCCCCEEESCBC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCC------------CCCCCCCCCCCCC
T ss_conf 5479888652256788888999999986088877069987999999999865214------------4466861477436
Q ss_pred CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 35446897524651371024568899999999999999998500123333668614689999999996532024777788
Q 002518 241 TYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGT 320 (913)
Q Consensus 241 pYa~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGT 320 (913)
+|++++++||+|||||||.+|+++|++|++|++||+|+++|... +..+| .+.|+++|++|+++||||+||||
T Consensus 406 ~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~-----~~~~~---~~~L~~~wk~lll~QhHD~i~Gt 477 (1045)
T 3bvx_A 406 TYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWD-----GMARI---EERLEQARRELSLFQHHDGITGT 477 (1045)
T ss_dssp SCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCC-----GGGCH---HHHHHHHHHHHHHHTBTTTTTSC
T ss_pred CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCC---HHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 65667763006326056899999999999999999999998761-----78760---89999999997550256677775
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCCC-CCCCCCCCCEEEEECCCC---EEEEE
Q ss_conf 52567988999999999999999999999996053334--6788765410102-436788840275405886---24999
Q 002518 321 AKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERY--DQNLSQFEPEQVR-SKYDAQPVHKVINVHEGT---SQSVV 394 (913)
Q Consensus 321 sk~~V~~Dy~~rL~~~~~~~~~v~~~~~~~l~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~vv 394 (913)
++++|++||..||..+++.++.++..++..|+...... +.....+.....+ .+.+.|+.+..+.++ .+ ...|+
T Consensus 478 s~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~vv 556 (1045)
T 3bvx_A 478 AKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVEDSRTTIILG-EDILPSKHVV 556 (1045)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCCCCCEECCB-TTTBSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-CCCCCCCEEE
T ss_conf 807999999999999999999999999999863434334443221111012101232346654432346-6656774699
Q ss_pred EECCCCCCEEEEEEEEECCCCEEEECCCCEEEEEEECCCCCCCC--------CCCCCCCEEEEEEEECCCCCEEEEEEEE
Q ss_conf 99288752459999996489589992798086673103412587--------5333571799999730888049999993
Q 002518 395 IFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGK--------SKIFTGRHRLHWKATIPALGLQVYYIAN 466 (913)
Q Consensus 395 vfNpL~~~r~~~V~i~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~--------~~~~~~~~~l~f~a~vPplG~~ty~i~~ 466 (913)
|||||+|+|+++|+|+|..+.+.|+|.+|++|++|+++.+.... .....+.|+|+|.|+||||||++|+|..
T Consensus 557 vfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~L~f~a~vP~lG~~ty~i~~ 636 (1045)
T 3bvx_A 557 MHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTTKYRIIFKARVPPMGLATYVLTI 636 (1045)
T ss_dssp EEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEEECTTEEEEEEEEE
T ss_pred EECCCCCCEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEE
T ss_conf 99499850226999995168669982898987589963234444311112445577872799998013885369999983
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCC--CCCCEEEEEECEE------EEEEECCCCEEEEEEC-CCCCEEEEEEE
Q ss_conf 7567677775203424899887899985446--7886048740629------9999666760799991-26826799999
Q 002518 467 GFVGCDKAKPVKLKYSSDNSFSCPTPYACSK--IEGDVADIRNRHQ------ILSFDVRHGLLQKISH-INGSQNVVEEE 537 (913)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ieN~~~------~i~fd~~~G~l~si~~-k~g~~~~v~~~ 537 (913)
.........++.+..-. ..+.++.... ...+...|||+++ +|+||. +|.|+||.+ ++|++..+.++
T Consensus 637 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si~dk~~g~e~~~~~~ 711 (1045)
T 3bvx_A 637 SDSKPEHTSYASNLLLR----KNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSIQLTQDSPHVPVHFK 711 (1045)
T ss_dssp CSSCCTTEEECEEEEEC----SSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEEECSTTSCCEEEEEE
T ss_pred CCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECC-CCCEEEEEECCCCEEEEEEEE
T ss_conf 68765544432200013----5664221234566777425504522156653799878-886799997479818877667
Q ss_pred EEEECCC----CCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf 9972159----986049826999987545894699997872779999203565687669999984288864103799999
Q 002518 538 IDMYSSQ----GSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEY 613 (913)
Q Consensus 538 f~~Y~~~----~sGaYiF~P~~~~~~~~~~~~~~~v~~G~l~~~v~~~~~~~~~~~~i~q~irLy~~~~~~~~~~ie~~~ 613 (913)
|.+|.+. .||||+|+|++.+.++....+.+.+++|||+++|++.+ .+++|++|| +.+ +||++|
T Consensus 712 f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev~~~~------~~i~q~irL--~~~-----~ieie~ 778 (1045)
T 3bvx_A 712 FLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGL------PSVVHQTIM--RGG-----APEIRN 778 (1045)
T ss_dssp EEEECBCSSSCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEEEEEE------TTEEEEEEE--SSS-----SCEEEE
T ss_pred EEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEE------EEEEEEEEE--CCE-----EEEEEE
T ss_conf 8887256689988613765798876534688459999688689999997------259999998--991-----289999
Q ss_pred EEEEECCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 97300178889359999997407997699707997421035679988776532136626875188762479622655201
Q 002518 614 HVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVA 693 (913)
Q Consensus 614 ~V~~~~~~~~~~e~~~rf~t~i~s~~~fyTD~nG~~~~~R~~~~~~p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~s 693 (913)
+||+.+ ..|||+++||+|+|+|++.||||+|||++++|++..++|+++|||||+++++|+|++ .||+||+||++|||
T Consensus 779 ~Vd~~~--~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~~~p~~~NyYPv~s~~~i~D~~-~~ltvl~drs~G~s 855 (1045)
T 3bvx_A 779 LVDIGS--LDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKLPLQANYYPIPSGMFIEDAN-TRLTLLTGQPLGGS 855 (1045)
T ss_dssp EECCTT--CTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCTTSCGGGGCEEESSEEEEECSS-EEEEEEESSCEEEE
T ss_pred EEECCC--CCCEEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCC-EEEEEEECCCCCCC
T ss_conf 993578--887489999445657887389926886368757788887314168741368997598-26999956776666
Q ss_pred ECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEC
Q ss_conf 04699599999310456689897867556740117999999405677765678886568202232100122475214321
Q 002518 694 SLKDGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFIS 773 (913)
Q Consensus 694 sl~~G~iElml~Rrl~~DD~rG~ge~l~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~ 773 (913)
|+.+|+||||||||+++||+|||||||+|++++..+++|+++....+.......+..+ |++++|..++.|++|+++|+.
T Consensus 856 Sl~~G~lElmlhRrl~~DD~rGvge~l~d~~~~~~~~~l~l~~~~~~~~~~~~~~~~~-~s~~~~~~~~~l~~p~~~~~~ 934 (1045)
T 3bvx_A 856 SLASGELEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLVLEKVNNCVRPSKLHPAGY-LTSAAHKASQSLLDPLDKFIF 934 (1045)
T ss_dssp CCSTTEEEEEEEEEBCSCCSSSCCSCBCCCCCEEEEEEEEEEECTTSCCCCTTCSEEC-CCHHHHHHHHHHHSCCEEEEE
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCEEEC
T ss_conf 5679758999966412577655466666774000489999825654454454565444-578899999887397453352
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 58877767999987688878999751698521379998878999866237888863157532237987411125634346
Q 002518 774 KKPQELSVQPPPRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNL 853 (913)
Q Consensus 774 ~~~~~~~~~~~~~~~s~l~~~lP~nvhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l 853 (913)
+... ......+|+++..+|||||||||||++.+... ...+++++|||.+++|+.+.. +.+++|+|
T Consensus 935 ~~~~---~~~~~~~~~~l~~~lP~~vhlltL~~~~~~~~-----~~~~~ll~L~~~~~~~~~~~~-------s~~~~~~l 999 (1045)
T 3bvx_A 935 AENE---WIGAQGQFGGDHPSAREDLDVSVMRRLTKSSA-----KTQRVGYVLHRTNLMQCGTPE-------EHTQKLDV 999 (1045)
T ss_dssp CSSC---CTTBCSEECTTSCCCCTTEEEEEEEECSCTTC-----SEEEEEEEEEECCCCCCSCCC-------CCCCCCCG
T ss_pred CCCC---CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC-----CCCEEEEEEEEECCCCCCCCC-------CCCCCCCH
T ss_conf 5766---43234567854446998779997576588986-----674189998640221476755-------67662239
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEEE
Q ss_conf 5422447403688723547323346468887656888998358536422489999854
Q 002518 854 FSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEMRP 911 (913)
Q Consensus 854 ~~lf~~~~v~~~~etsL~~~~~~~~~~~~~~~~~~~~~~~~v~l~Pmei~tf~~~~~~ 911 (913)
++||+. |.+++||||++++...+.. ....|+|+|||||||++++++
T Consensus 1000 ~~lf~~--i~~~~etsL~~~~~~~~~~----------~~~~v~l~PmeirTf~i~~~~ 1045 (1045)
T 3bvx_A 1000 CHLLPN--VARCERTTLTFLQNLEHLD----------GMVAPEVCPMETAAYVSSHSS 1045 (1045)
T ss_dssp GGSSSS--EEEEEEECTTSCSEEEECG----------GGCCCCCCTTCEEEEEEEEEC
T ss_pred HHHHCC--CCEEEEECCCCCCCCCCCC----------CCCCEEECCCEEEEEEEEEEC
T ss_conf 997347--3539994443776564447----------876168717644899999609
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=1.00 E-value=1 Score=855.88 Aligned_cols=712 Identities=16% Similarity=0.174 Sum_probs=532.9
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECC----HHHH---HHHHHCCCEEEEEEECC
Q ss_conf 9136678999996709998501750999986678999998399605674058----8899---99854275589997479
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTH----YELK---KELALHQNLEYIWRQSW 73 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~----~~~k---~~~~~~~~leF~Wr~~~ 73 (913)
||||++||+|+++ ||+.|++||+|||||||+++|+||++|||++++|||++ |++| ..+...+.+||+|+|+
T Consensus 123 irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil~~~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~- 200 (923)
T 2wyh_A 123 VRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLMLKAGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGP- 200 (923)
T ss_dssp HHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHHHTTTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECT-
T ss_pred HHHHHHHHHHHHH-CCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEECC-
T ss_conf 9999999999998-19997624814899862689999997699789997023532233222211211588855999889-
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999852783079865689987799995100122123587433469888899779811299999999999986125446
Q 002518 74 DTEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYR 153 (913)
Q Consensus 74 ~~~~~s~ifth~lp~y~Y~~p~~c~p~~~~c~~fDf~~~~g~~~~~c~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~ 153 (913)
+|++||||++| ++|+. |. +.+++++|++.+++.+++..++ .++
T Consensus 201 ---dGs~Ilt~~~p-~~Y~~----g~--------------------------~~~~~~~~v~~~~~~~~~~~~~---~~~ 243 (923)
T 2wyh_A 201 ---DNSRILGLLFA-NWYSN----GN--------------------------EIPTTEAEARLFWDKKLADAER---FAS 243 (923)
T ss_dssp ---TCCEEEEEECT-TCTTT----TC--------------------------SCCSSHHHHHHHHHHHHHHHHH---HCS
T ss_pred ---CCCEEEEEECC-CCCCC----CC--------------------------CCCCCHHHHHHHHHHHHHHHHH---CCC
T ss_conf ---99828999777-77668----98--------------------------7998989999999999999985---488
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 78499970499899981337999996999999994399974289938988999999997510147899877899767897
Q 002518 154 TNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFP 233 (913)
Q Consensus 154 tn~iL~p~G~Df~y~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~sT~s~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p 233 (913)
++++|+|+|+||+|. ++||+++|+++|+... .++++|||++|||++|+++. ...||
T Consensus 244 t~~~l~~~G~D~~~~--------~~~~~~~i~~~n~~~~-~~~~~~sT~~~yf~~l~~~~---------------~~~lp 299 (923)
T 2wyh_A 244 TKHLLMMNGCDHQPV--------QLDVTKAIALANQLYP-DYEFVHSCFEDYLADLADDL---------------PENLS 299 (923)
T ss_dssp SSEEEEEECCBTCCC--------CTTHHHHHHHHHHHCT-TEEEEECCHHHHHHHHHHHS---------------CSCCC
T ss_pred CCEEEEEEECCCCCC--------CHHHHHHHHHHHHHCC-CCEEEECCHHHHHHHHHHHC---------------CCCCC
T ss_conf 870999960398986--------3429999999985489-85599879999999987652---------------25685
Q ss_pred CCCCCCCCCCCCCCCCE---EEEECCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 52387323544689752---465137102456889999999-99999999985001233336686146899999999965
Q 002518 234 SLSGDFFTYADRQQDYW---SGYYVSRPFFKAVDRVLEQTL-RATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLA 309 (913)
Q Consensus 234 ~~~gDffpYa~~~~~yW---tGyyTSRp~~K~~~R~~e~~L-~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~ 309 (913)
+++||||.+.+ .+| +|||||||++|+++|++|++| |+||+|+++|... +..|| .+.|+++|++|+
T Consensus 300 ~~~GEl~~~~~---~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~-----g~~yp---~~~L~~~Wk~ll 368 (923)
T 2wyh_A 300 TVQGEITSQET---DGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEV-----TSTYP---HDQLRYAWKTLM 368 (923)
T ss_dssp EEESCBSCTTS---CSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHH-----HSCCC---HHHHHHHHHHHH
T ss_pred EECCCCCCCCC---CCCEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCC---HHHHHHHHHHHH
T ss_conf 43034457555---66211488852689999999999999999999999999972-----88886---689999999975
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 32024777788525679889999999999999999999999960533346788765410102436788840275405886
Q 002518 310 LFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGT 389 (913)
Q Consensus 310 l~QhHDaItGTsk~~V~~Dy~~rL~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (913)
++||||+||||++++|++||..||.++.+.+..++..++..|+..... + ....+
T Consensus 369 ~~Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~----------------------~----~~~~~ 422 (923)
T 2wyh_A 369 QNHPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDT----------------------R----DFPMD 422 (923)
T ss_dssp TTCBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC----------------------T----TSCTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------------------C----CCCCC
T ss_conf 627876757758779999999999999999999999999999744566----------------------6----67888
Q ss_pred EEEEEEECCCCCCEEEEEEEEEC-------------------------CCCEEEECCCCEEEE-EEECCCCCC-------
Q ss_conf 24999992887524599999964-------------------------895899927980866-731034125-------
Q 002518 390 SQSVVIFNPLEQTREEIVMVIVN-------------------------RPDITVLDSNWTCVQ-SQISPELRH------- 436 (913)
Q Consensus 390 ~~~vvvfNpL~~~r~~~V~i~v~-------------------------~~~~~V~d~~g~~v~-~Qi~~~~~~------- 436 (913)
...++|||||+|+|+++|+++|. .+.+.|+|.+|++|+ +|+++.+..
T Consensus 423 ~~~vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~~~~~~~~~ 502 (923)
T 2wyh_A 423 SQPFVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSIAFDYDLPK 502 (923)
T ss_dssp SEEEEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEEEEEEECCS
T ss_pred CEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCEECCEEEEECCCCCCCCCCC
T ss_conf 40899994999647589999997253332223432110000112103678779997998995519998512344422555
Q ss_pred CCC--CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCEEEEEECEEEEE
Q ss_conf 875--33357179999973088804999999375676777752034248998878999854467-886048740629999
Q 002518 437 GKS--KIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKI-EGDVADIRNRHQILS 513 (913)
Q Consensus 437 ~~~--~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ieN~~~~i~ 513 (913)
.+. .....++++.|.++||||||++|.|....... ..... .. ..++.+|||++++|+
T Consensus 503 ~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~----~~~~~----------------~~~~~~~~~leN~~~~v~ 562 (923)
T 2wyh_A 503 RSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETT----PSETV----------------SLYDDSNQCLENGFLKVM 562 (923)
T ss_dssp SSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC----------CC----------------CSEETTTTEEECSSEEEE
T ss_pred CCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCC----CCCCC----------------CCCCCCCCEEECCEEEEE
T ss_conf 5665653103699999997387500899999888766----66531----------------013678725756808999
Q ss_pred EECCCCEEEEEEC-CCCCEEEEEEEEEEEC--CCCCCEEEECCCCCCCCCC--CCCCEEEEEE-CCCEEEEEEEECC---
Q ss_conf 9666760799991-2682679999999721--5998604982699998754--5894699997-8727799992035---
Q 002518 514 FDVRHGLLQKISH-INGSQNVVEEEIDMYS--SQGSGAYLFMPNGDAHPIT--EAGGLMVISK-GPLMEEAYSYPRT--- 584 (913)
Q Consensus 514 fd~~~G~l~si~~-k~g~~~~v~~~f~~Y~--~~~sGaYiF~P~~~~~~~~--~~~~~~~v~~-G~l~~~v~~~~~~--- 584 (913)
||+ +|.+ +|.+ ++|++.. +|..|. ++.+|||+|+|++.+.++. .....+.+++ ||++++|++.+..
T Consensus 563 ~d~-~G~l-si~dk~~gr~~~---~~~~y~d~~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP 637 (923)
T 2wyh_A 563 IQT-DGRL-TITDKQSGLIYQ---DLLRFEDCGDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIP 637 (923)
T ss_dssp ECT-TSCE-EEEETTTCCEEE---EESEEEEEECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEE
T ss_pred EEC-CCCE-EEEECCCCEEEE---EEEEEEECCCCCCEEEEECCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEEECCC
T ss_conf 908-9878-999978993988---88999605998870688768887303316787469999868877999999986377
Q ss_pred --------------------CCCCC------CEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCC
Q ss_conf --------------------65687------6699999842888641037999999730017888935999999740799
Q 002518 585 --------------------AWERS------PISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNK 638 (913)
Q Consensus 585 --------------------~~~~~------~i~q~irLy~~~~~~~~~~ie~~~~V~~~~~~~~~~e~~~rf~t~i~s~ 638 (913)
..+.+ +++|+++||++.+ +|||+++|||++ .+|+++++|+|+|.++
T Consensus 638 ~~~~~~L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~-----~ie~~~~vd~~~---~~~~l~v~fpt~i~s~ 709 (923)
T 2wyh_A 638 ISADKLLQAEMEAVIDITERQARRSQEKAELTLTTLIRMEKNNP-----RLQFTTRFDNQM---TNHRLRVLFPTHLKTD 709 (923)
T ss_dssp SSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCS-----CEEEEEEEEECC---CSEEEEEEEECCCCCS
T ss_pred CCCHHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCC-----EEEEEEEECCCC---CCEEEEEEECCCCCCC
T ss_conf 43012210111122201334423466666458999999928996-----589999988733---8989999901553789
Q ss_pred CEEEEECCCCCCCCCCCCCCC---CCCCCEECCCCEEEEECCCCCEEEEEECCCCCEEEC-CCCEEEEEEEECC--CCCC
Q ss_conf 769970799742103567998---877653213662687518876247962265520104-6995999993104--5668
Q 002518 639 RIFYSDLNGFQMSRRETYDKI---PLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASL-KDGWLEIMLDRRL--SRDD 712 (913)
Q Consensus 639 ~~fyTD~nG~~~~~R~~~~~~---p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl-~~G~iElml~Rrl--~~DD 712 (913)
..+| | |||++++|++..+. ..++||||+.++++|+|.+ .+++|+||+++|++++ .+|+|+|||+|++ +.|
T Consensus 710 ~~~~-d-~~fg~i~R~~~~~~~~w~~a~~~~p~~~~v~l~d~~-~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~- 785 (923)
T 2wyh_A 710 HHLA-D-SIFETVKRPNHPDATFWKNPSNPQHQECFVSLFDGE-NGVTIGNYGLNEYEILPDTNTIAITLLRSVGEMGD- 785 (923)
T ss_dssp EEEE-E-ETTEEEEEESSCCTTTCCCSCCCEECSSEEEEECSS-EEEEEEESSCCEEEEETTTTEEEEEEEEECSBCCT-
T ss_pred CEEE-E-CCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC-
T ss_conf 7799-4-586389826878777765666417422399998798-76899858965368866898499998136532366-
Q ss_pred CCCCCCCCCCCC-CEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 989786755674-0117999999405677765678886568202232100122475214321588777679999876888
Q 002518 713 GRGLGQGVLDNR-AMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFSPL 791 (913)
Q Consensus 713 ~rG~ge~l~d~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l 791 (913)
+|+ +|..+.. .....|.+-+.+.... .. . ........++.|+.++...... ......++.+
T Consensus 786 -~G~-~p~p~a~~~G~h~f~yal~~~~g~----~~-------~-~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~l 847 (923)
T 2wyh_A 786 -WGY-FPTPEAQCLGKHSLSYSFESITKQ----TQ-------F-ASYWRAQEGQVPVITTQTNQHE----GTLAAEYSYL 847 (923)
T ss_dssp -TSC-CBCGGGGCCEEEEEEEEEEEEETT----TH-------H-HHHHHHHHTTSCCEEEECCSCC----CSBCSEEESC
T ss_pred -CCC-CCCCHHHHCEEEEEEEEECCCCCC----HH-------H-HHHHHHHHHHCCHHHEECCCCC----CCCCCCCCCE
T ss_conf -776-368335741279999997116886----46-------8-8999999873877513347665----7677666530
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCC
Q ss_conf 78999751698521379998878999866237888863157532237987411125634346542244740368872354
Q 002518 792 AGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLN 871 (913)
Q Consensus 792 ~~~lP~nvhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~etsL~ 871 (913)
.. -|.+|+|.+||...+. -.+|||..+... .. .+ .+.+ .+.+..+.++.|.
T Consensus 848 ~~-~~~~v~l~alK~aed~-----------~~~ilRl~n~~g-----~~-~~------~l~~-----~~~~~~~~~~~ll 898 (923)
T 2wyh_A 848 TG-TNDQVALTAFKRRLAD-----------NALITRSYNLSN-----DK-TC------DFSL-----SLPNYNAKVTNLL 898 (923)
T ss_dssp BC-CCTTEEEEEEEECTTT-----------CCEEEEEEESCS-----SC-CE------ECCC-----BCTTEEEEEECTT
T ss_pred EC-CCCCEEEEEEEECCCC-----------CCEEEEEECCCC-----CC-CE------EEEE-----CCCCCEEEEEECC
T ss_conf 22-8997899998881689-----------948999724789-----85-31------7883-----2665439995245
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEEE
Q ss_conf 732334646888765688899835853642248999985
Q 002518 872 LLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEMR 910 (913)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~v~l~Pmei~tf~~~~~ 910 (913)
.-.. ... . .+.|.|-||+||+++++
T Consensus 899 E~~~--~~~----------~--~~~l~p~ei~T~~l~~~ 923 (923)
T 2wyh_A 899 EKDS--KQS----------T--PSQLGKAEILTLAWKKQ 923 (923)
T ss_dssp CCBC--SCC----------C--CSEECTTCEEEEEEEEC
T ss_pred CCCC--CCC----------C--CCEECCCCEEEEEEEEC
T ss_conf 7504--546----------5--10176761489999959
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=1.00 E-value=1 Score=770.39 Aligned_cols=717 Identities=15% Similarity=0.157 Sum_probs=511.7
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECC----HHHHHHH--HHCCCEEEEEEECCC
Q ss_conf 9136678999996709998501750999986678999998399605674058----8899998--542755899974799
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTH----YELKKEL--ALHQNLEYIWRQSWD 74 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~----~~~k~~~--~~~~~leF~Wr~~~~ 74 (913)
||||++||+|+++ ||+.|++||+|||||||+++|+||++|||++++|+|++ |+.++.. ...+.+||+|+|+
T Consensus 104 irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~~~~Gi~~~~~~Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~-- 180 (899)
T 3lvt_A 104 VRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMMQLANLPAAAFGRGVKPIGFDNQVLESDYSSQYSEMWWEGP-- 180 (899)
T ss_dssp HHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHHHTTTCCEEEEC---------------------CEEEEECT--
T ss_pred HHHHHHHHHHHHH-CCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECC--
T ss_conf 9999999999997-3999862372789987367999999769974999334454444431221124787746999779--
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99998527830798656899877999951001221235874334698888997798112999999999999861254467
Q 002518 75 TEETSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRT 154 (913)
Q Consensus 75 ~~~~s~ifth~lp~y~Y~~p~~c~p~~~~c~~fDf~~~~g~~~~~c~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~t 154 (913)
+|++||||++|+ +|+ ||. .. +.++++++.+++.+++..++ .+++
T Consensus 181 --dGs~vlt~~~~~-~Y~----~g~-----------------------~~---p~~~~~~~~~~~~~~~~~~~---~~~t 224 (899)
T 3lvt_A 181 --DQTKIFGLLFAN-WYS----NGN-----------------------EI---PSEKEAAIAFWKQKLADVER---YAST 224 (899)
T ss_dssp --TSCEEEEEECCC-C--------C-----------------------CS---CSSHHHHHHHHHHHHHHHHH---HCSS
T ss_pred --CCCEEEEEECCC-CCC----CCC-----------------------CC---CCCHHHHHHHHHHHHHHHHH---HCCC
T ss_conf --998499997777-676----766-----------------------79---87689999999999998875---0688
Q ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 84999704998999813379999969999999943999742899389889999999975101478998778997678975
Q 002518 155 NTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPS 234 (913)
Q Consensus 155 n~iL~p~G~Df~y~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~sT~s~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~ 234 (913)
+++|+|+|+||.. +++||+++|+++|+... .+++++||+++||++|+++. ...||+
T Consensus 225 ~~il~~~G~D~~p--------~~~~l~~~i~~~n~~~p-~~~~~~st~~~yf~~l~~~~---------------~~~lp~ 280 (899)
T 3lvt_A 225 NHLLMMNGVDHQP--------VQRDITKAIALANELFP-EYEFIHSNFDDYLKAVQEEL---------------PEDLGT 280 (899)
T ss_dssp SEEEEEEEEC--------------CHHHHHHHHHHHCS-SEEEEECCHHHHHHHHHHTC---------------C--CCE
T ss_pred CEEEEEECCCCCC--------HHHHHHHHHHHHHHCCC-CCEEEECCHHHHHHHHHHHC---------------CCCCCC
T ss_conf 7189954689996--------07889999999973099-85499769999999998752---------------233772
Q ss_pred CCCCCCCCCCCCCCCEE-EEECCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 23873235446897524-651371024568899999999-9999999985001233336686146899999999965320
Q 002518 235 LSGDFFTYADRQQDYWS-GYYVSRPFFKAVDRVLEQTLR-ATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQ 312 (913)
Q Consensus 235 ~~gDffpYa~~~~~yWt-GyyTSRp~~K~~~R~~e~~L~-~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~Q 312 (913)
++||||++..+ ..||+ |||||||++|+++|++|++|+ +||+|+++|... +..|| .+.|+++|++|+++|
T Consensus 281 ~~GEl~~~~~~-G~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~-----g~~yp---~~~l~~~Wk~ll~~Q 351 (899)
T 3lvt_A 281 VTGELTSQETD-GWYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEV-----TGDYP---HDQFDYAWKTLLQNH 351 (899)
T ss_dssp EECCC------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHH-----HSCCC---HHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCC-CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCC---HHHHHHHHHHHHCCC
T ss_conf 45651464458-6279778231279999999999999999999999999973-----78885---799999999984637
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEE
Q ss_conf 24777788525679889999999999999999999999960533346788765410102436788840275405886249
Q 002518 313 HHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQS 392 (913)
Q Consensus 313 hHDaItGTsk~~V~~Dy~~rL~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (913)
|||+||||++++|++||..||.++++.++.++..++..|+..... +. .. .+...
T Consensus 352 ~HD~i~Gtsi~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~-------------------~~------~~-~~~~~ 405 (899)
T 3lvt_A 352 PHDSICGCSVDEVHRGMMTRFENANDVGHFLADEATRQLTEAIDT-------------------SV------FP-EKAHP 405 (899)
T ss_dssp STTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC-------------------TT------SC-TTCEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------CC------CC-CCCCE
T ss_conf 887667758679999999999999999999999999999851566-------------------66------77-78877
Q ss_pred EEEECCCCCCEEEEEEEEECC----------------------CCEEEECCCCEEEEEEECCCCCCC-----C----CCC
Q ss_conf 999928875245999999648----------------------958999279808667310341258-----7----533
Q 002518 393 VVIFNPLEQTREEIVMVIVNR----------------------PDITVLDSNWTCVQSQISPELRHG-----K----SKI 441 (913)
Q Consensus 393 vvvfNpL~~~r~~~V~i~v~~----------------------~~~~V~d~~g~~v~~Qi~~~~~~~-----~----~~~ 441 (913)
++|||||+|+|+++|++++.. +.+.|.|.+|++||+|+++..... . ...
T Consensus 406 v~vfN~l~~~r~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~~~~~~~ 485 (899)
T 3lvt_A 406 FVLFNTSGYQKTEVVTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAFRQPY 485 (899)
T ss_dssp EEEEECSSSCEEEEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC-----CEE
T ss_pred EEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99992999603269999987254432334510110000013678549998999997489951454212335655445543
Q ss_pred CCCCEEEEEEE-ECCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEECCCCE
Q ss_conf 35717999997-30888049999993756767777520342489988789998544678860487406299999666760
Q 002518 442 FTGRHRLHWKA-TIPALGLQVYYIANGFVGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGL 520 (913)
Q Consensus 442 ~~~~~~l~f~a-~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~i~fd~~~G~ 520 (913)
....++|.|.+ +||||||++|.|........ .. . . ....+..+|||++++|+||+ +|.
T Consensus 486 ~~~~~~l~f~a~~vPalGy~~~~i~~~~~~~~--~~---------------~--~-~~~~~~~~leN~~~~v~~d~-~G~ 544 (899)
T 3lvt_A 486 MAKYLTVELSVKEMAPFSWDSFALIQGETKAF--EG---------------S--L-LAQPATNEMENEFIQVKIEN-NGS 544 (899)
T ss_dssp EEEEEEEEEEEEEECTTEEEEEEEEESCCCCC--CS---------------C--C-SEETTTTEEECSSEEEEECT-TSC
T ss_pred CCCEEEEEEEECCCCCCCCEEEEEEECCCCCC--CC---------------C--C-CCCCCCCEEECCCEEEEECC-CCC
T ss_conf 12148999994677877777999984676665--43---------------2--1-23566737745738999948-984
Q ss_pred EEEEEC-CCCCEEEEEEEEEEEC--CCCCCEEEECCCCCCCCCCCCC--CEEEE-EECCCEEEEEEEECC----------
Q ss_conf 799991-2682679999999721--5998604982699998754589--46999-978727799992035----------
Q 002518 521 LQKISH-INGSQNVVEEEIDMYS--SQGSGAYLFMPNGDAHPITEAG--GLMVI-SKGPLMEEAYSYPRT---------- 584 (913)
Q Consensus 521 l~si~~-k~g~~~~v~~~f~~Y~--~~~sGaYiF~P~~~~~~~~~~~--~~~~v-~~G~l~~~v~~~~~~---------- 584 (913)
| +|.+ ++|+++. ++..|. ++.+++|+|+|+..+.++.... ..+.+ ++||++++|++.+..
T Consensus 545 l-sl~Dk~~gre~~---~~~~~~d~gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~ 620 (899)
T 3lvt_A 545 L-TIADKKTGETFS---KLLTFEDTGDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERL 620 (899)
T ss_dssp E-EEEETTTCCEEE---EETEEEEEECCSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHH
T ss_pred E-EEEECCCCEEEE---EEEEEECCCCCCCCEEECCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCCHHHHH
T ss_conf 8-999988990998---778995378878843655876782244467773399997588889999999981564312321
Q ss_pred -------------CCCCC------CEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCEEEEEC
Q ss_conf -------------65687------66999998428886410379999997300178889359999997407997699707
Q 002518 585 -------------AWERS------PISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDL 645 (913)
Q Consensus 585 -------------~~~~~------~i~q~irLy~~~~~~~~~~ie~~~~V~~~~~~~~~~e~~~rf~t~i~s~~~fyTD~ 645 (913)
..+.+ +++|+++||++++ +|||+++|||.. .+|+++++|+|+|.++.++|+
T Consensus 621 ~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~-----~id~~~~Vdw~~---~~~~Lrv~Fp~~i~s~~~~~d-- 690 (899)
T 3lvt_A 621 EEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESN-----QLFFETTINNQI---KDHRLRVLFPTGMVTETHEAD-- 690 (899)
T ss_dssp HHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCC-----CEEEEEEEEECC---CSEEEEEEECCSCCCSEEEEE--
T ss_pred CCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEECCCC-----EEEEEEEECCCC---CCEEEEEECCCCCCCCCEEEE--
T ss_conf 0000111100012204565555168999999937997-----799999987875---898999988787776855884--
Q ss_pred CCCCCCCCCCCCCC--CCCCCEECCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEEEECCCCCCCCCC-CCCCCC
Q ss_conf 99742103567998--877653213662687518876247962265520104699599999310456689897-867556
Q 002518 646 NGFQMSRRETYDKI--PLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGL-GQGVLD 722 (913)
Q Consensus 646 nG~~~~~R~~~~~~--p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~iElml~Rrl~~DD~rG~-ge~l~d 722 (913)
.+|++++|++..+. ..++++||+.+++.|.|.+ .+++|+||+++|++++.+|.|+|||+|+.-.-=..|+ ..|-.|
T Consensus 691 ~~fG~i~Rpt~~~t~We~a~~e~~~~~~vdlsd~~-~Gvavlnd~~~gy~v~~d~~i~LTLlRs~g~lG~~g~~p~Pda~ 769 (899)
T 3lvt_A 691 SIYEVVTRPNQVSDTWENPTNPQHQQAFVNVHDQN-KGVTIFNEGLNEYEVLADGTIAVTLIRCVGELGDWGYFATPEAQ 769 (899)
T ss_dssp CSSSEEEEEC-------CCCCCEECSSEEEEECSS-CEEEEEESSCCEEEECTTCCEEEEEEEECSBCCTTSCCBCGGGG
T ss_pred CCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCC-CEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 26469987899976665787653101499986698-24999968975435767987999984146765546775896636
Q ss_pred CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 74011799999940567776567888656820223210012247521432158877767999987688878999751698
Q 002518 723 NRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFSPLAGSLPCDLHIV 802 (913)
Q Consensus 723 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~lP~nvhLl 802 (913)
- ...+.|.+-+.+..... . ..- .......++.|+..+...... ......+|.+. --+.+|.|-
T Consensus 770 ~-~G~h~F~yal~ph~g~~-~---------~~~-~~~~a~~~n~pl~~~~~~~~~----~~l~~~~s~~~-~~~~~v~ls 832 (899)
T 3lvt_A 770 C-QGEYTFKYGLSLHGKPE-E---------RFA-TYQQAYSAQIPFTAATTARHE----GKLAPNHVYLT-TAEGPIGWT 832 (899)
T ss_dssp C-CEEEEEEEEEEEESSGG-G---------HHH-HHHHHHHHTSCCEEEECCSCC----CSBCSEEESEE-CCCSSEEEE
T ss_pred H-HCCEEEEEEEEECCCCC-H---------HHH-HHHHHHHHCCCCCEEECCCCC----CCCCCCCCCEE-ECCCCEEEE
T ss_conf 5-18569999999547971-2---------548-999999864984224426566----76777666436-479989999
Q ss_pred EEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 52137999887899986623788886315753223798741112563434654224474036887235473233464688
Q 002518 803 NFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGY 882 (913)
Q Consensus 803 tl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~etsL~~~~~~~~~~~~ 882 (913)
++|.-.+. -++|+|.... .+. ..++.+. |. + +..+.++.|-.-. .+
T Consensus 833 avK~aEd~-----------~~~IlRlye~------~g~-------~~~l~~~--~~-~-~~~~~~~nllE~~--~~---- 878 (899)
T 3lvt_A 833 AVKRQEQT-----------NHLVVRGFNL------TAQ-------NIPCELH--KE-T-QPATCLTNVLEEP--LT---- 878 (899)
T ss_dssp EEEECTTT-----------CCEEEEEEEC------SSS-------CBCCCCE--ET-T-EECCEEECTTSCB--CS----
T ss_pred EEEEEECC-----------CCEEEEEECC------CCC-------CEEEEEC--CC-C-CCCEEEECCCCCC--CC----
T ss_conf 98861439-----------9689999718------999-------6778974--47-6-5516880056665--66----
Q ss_pred CCCCCCCCCCCCEEECCCEEEEEEEE
Q ss_conf 87656888998358536422489999
Q 002518 883 PEQLEDVSQDGQVTIAPMEIQAYKLE 908 (913)
Q Consensus 883 ~~~~~~~~~~~~v~l~Pmei~tf~~~ 908 (913)
. .....+.+.|-||+|++++
T Consensus 879 -----~-~~~~~~~~~pfeI~T~~~~ 898 (899)
T 3lvt_A 879 -----P-AIEVDAPLRPFEIRTWRFE 898 (899)
T ss_dssp -----S-CCCTTSCBCTTCEEEEEEC
T ss_pred -----C-CCCEEEEECCCEEEEEEEE
T ss_conf -----7-8602442757058999970
No 4
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=1.00 E-value=1 Score=449.92 Aligned_cols=250 Identities=25% Similarity=0.387 Sum_probs=217.6
Q ss_pred EEEEEECEEEEEEECCCCEEEEEEC-CCCCEEEEEEEEEEECCC--------CCCEEEECCCCCCCCCCCCCCEEEEEEC
Q ss_conf 0487406299999666760799991-268267999999972159--------9860498269999875458946999978
Q 002518 502 VADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYSSQ--------GSGAYLFMPNGDAHPITEAGGLMVISKG 572 (913)
Q Consensus 502 ~~~ieN~~~~i~fd~~~G~l~si~~-k~g~~~~v~~~f~~Y~~~--------~sGaYiF~P~~~~~~~~~~~~~~~v~~G 572 (913)
++.|+|+++++.||+.+|+|+++.+ ++|.+..+.++|.+|.+. .||||||+|++.+.+.....+.+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred CEEECCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEC
T ss_conf 57870765999988999868999986788088776789999534688877888726896579987743378847999979
Q ss_pred CCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECC-CCCCCEEEEEEEEEECCCCEEEEECCCCCCC
Q ss_conf 727799992035656876699999842888641037999999730017-8889359999997407997699707997421
Q 002518 573 PLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFNDRELIVRYKTDIDNKRIFYSDLNGFQMS 651 (913)
Q Consensus 573 ~l~~~v~~~~~~~~~~~~i~q~irLy~~~~~~~~~~ie~~~~V~~~~~-~~~~~e~~~rf~t~i~s~~~fyTD~nG~~~~ 651 (913)
|+++||++.+. .|++|++|||++.. .+|++|+|+++|. +..|||++|||.|+|+|+++||||+|||||+
T Consensus 82 ~lv~eV~~~~~-----~~~sq~~Rly~~~~-----~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~ 151 (282)
T 1o7d_D 82 SLVQEVHQNFS-----AWCSQVVRLYPRQR-----HLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREIL 151 (282)
T ss_dssp SSCEEEEEEEE-----TTEEEEEEECTTCS-----SEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEE
T ss_pred CEEEEEEEEEC-----CCEEEEEEEECCCC-----EEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCEEE
T ss_conf 89999999978-----96899999936895-----389999985511368888489999985515699688978980305
Q ss_pred CCCCC-----C---CCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 03567-----9---988776532136626875188762479622655201046995999993104566898978675567
Q 002518 652 RRETY-----D---KIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVLDN 723 (913)
Q Consensus 652 ~R~~~-----~---~~p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~iElml~Rrl~~DD~rG~ge~l~d~ 723 (913)
||.+. . ++|++||||||+++|+|+|++ .||+|++|||+||||+++|+||||||||+++||+|||||||+|+
T Consensus 152 kR~~~~r~~~~~~~~~pv~gNYYPv~s~~~IqD~~-~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~ 230 (282)
T 1o7d_D 152 ERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGN-MQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKE 230 (282)
T ss_dssp EEETTCCSSSCCCCSCTTGGGCEEESSEEEEECSS-EEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCC
T ss_pred EEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-EEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 78824565654343567656365001279998288-28999963356330068975999986340446632115443455
Q ss_pred ---CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCC
Q ss_conf ---4011799999940567776567888656820223210012247521432158
Q 002518 724 ---RAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKK 775 (913)
Q Consensus 724 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~p~~~~~~~~ 775 (913)
..+..+++|+++....+ ....|.+++++.+|++++++..
T Consensus 231 ~~gl~v~g~~~l~l~~~~~~-------------~~~~r~~~~~~~~p~~~~fs~~ 272 (282)
T 1o7d_D 231 GSGLWVRGRHLVLLDKKETA-------------AARHRLQAEMEVLAPQVVLAQG 272 (282)
T ss_dssp GGGGSEEEEEEEEEEEHHHH-------------HHHHHHHHHHHHSCCEEEEEEC
T ss_pred CCCEEEEEEEEEEEECCCCC-------------HHHHHHHHHHHHCCHHHHEECC
T ss_conf 88808889999998086432-------------1343478886648506201047
No 5
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=1.00 E-value=1 Score=333.13 Aligned_cols=175 Identities=30% Similarity=0.560 Sum_probs=154.7
Q ss_pred CHHHHHHHHHHHHHHCCC--CCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEEEECCCCC-C
Q ss_conf 913667899999670999--8501750999986678999998399605674058889999854275589997479999-9
Q 002518 1 MHQIMEGNMWLNDTIGFI--PKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTE-E 77 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~--p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~leF~Wr~~~~~~-~ 77 (913)
||||++||+|++++||++ |++||+|||||||+++|+||++|||++++++|++|++|+.+...+.+||+|+|+++++ +
T Consensus 120 irQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~d 199 (298)
T 1o7d_A 120 IDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLFAQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPP 199 (298)
T ss_dssp HHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHHHHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 99999999999998499878864684789986678999999759986999833400000014578833898789887899
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 98527830798656899877999951001221235874334698888997798112999999999999861254467849
Q 002518 78 TSDIFVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTL 157 (913)
Q Consensus 78 ~s~ifth~lp~y~Y~~p~~c~p~~~~c~~fDf~~~~g~~~~~c~~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~i 157 (913)
|++||||++|+ +| +|++++| ||+.+ + .-|..++| .++++||++|++.|++++++++++|+||+|
T Consensus 200 gs~i~t~~~~~-~Y------~~~~g~~--fd~~~--~----~~p~~~~~-~~~~~nv~~r~~~~~~~~~~~a~~~~t~~v 263 (298)
T 1o7d_A 200 TADLFTSVLPN-MY------NPPEGLC--WDMLC--A----DKPVVEDT-RSPEYNAKELVRYFLKLATDQGKLYRTKHT 263 (298)
T ss_dssp TTEEEEEECSS-TT------SCCTTCC--CSTTC--C----CCCCCCCT-TSTTCCHHHHHHHHHHHHHHHHTTSSSSEE
T ss_pred CCEEEEEEECC-CC------CCCCCCC--CCCCC--C----CCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 99689997278-87------8988762--34566--7----76746774-114779999999999999998750578837
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9970499899981337999996999999994399974
Q 002518 158 LVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLN 194 (913)
Q Consensus 158 L~p~G~Df~y~~~~~a~~~f~n~dkli~~iN~~~~~~ 194 (913)
|+|+|+||+|. +|..||+||++||+|+|+++++|
T Consensus 264 l~p~G~Df~~~---~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 264 VMTMGSDFQYE---NANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp EEEECCBTCCT---THHHHHHHHHHHHHHHHC-----
T ss_pred EECCCCCCCCC---CHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 72267887864---06689988999999996067568
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=1.00 E-value=1 Score=222.05 Aligned_cols=149 Identities=24% Similarity=0.410 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999653202477778852567988999999999999999999999996053334678876541010243678884
Q 002518 300 KLTAARRNLALFQHHDGVTGTAKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPV 379 (913)
Q Consensus 300 ~l~~a~~~l~l~QhHDaItGTsk~~V~~Dy~~rL~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (913)
.|++|||+|+++|||||||||+|++|++||..||..+++.+..++..+++.|+.... .|..|.. .+.+.||.
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~~-------~~~~~~~-ln~~~~~~ 73 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLKE-------DFAFCRK-LNISICPL 73 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS-------CEECCTT-GGGTCCHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------CCCCCCC-CCCCCCCC
T ss_conf 289999987472557767755757999999999999999999999999999854865-------4442343-33331766
Q ss_pred CEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCE
Q ss_conf 02754058862499999288752459999996489589992798086673103412587533357179999973088804
Q 002518 380 HKVINVHEGTSQSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGL 459 (913)
Q Consensus 380 ~~~~~~~~~~~~~vvvfNpL~~~r~~~V~i~v~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~ 459 (913)
. ..++.+.|+|||||+|+|+++|+++|+.+.+.|+|.+|++|++|+.+.+.. ..++|.|.++||||||
T Consensus 74 ~-----~~~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~-------~~~~l~f~a~vP~lG~ 141 (159)
T 1o7d_C 74 T-----QTAERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS-------DSQELLFSALVPAVGF 141 (159)
T ss_dssp H-----HHCSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT-------TEEEEEEEEEECTTEE
T ss_pred C-----CCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCEEEEEEEECCCC-------CCEEEEEEEECCCCEE
T ss_conf 5-----677647999998998617479999986886899959979953699965688-------8449999964088641
Q ss_pred EEEEEEECC
Q ss_conf 999999375
Q 002518 460 QVYYIANGF 468 (913)
Q Consensus 460 ~ty~i~~~~ 468 (913)
++|+|..+.
T Consensus 142 ~ty~i~~~~ 150 (159)
T 1o7d_C 142 SIYSVSQMP 150 (159)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
T ss_conf 899999789
No 7
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=1.00 E-value=1 Score=169.06 Aligned_cols=75 Identities=27% Similarity=0.468 Sum_probs=69.3
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 74289938988999999997510147899877899767897523873235446897524651371024568899999999
Q 002518 193 LNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLR 272 (913)
Q Consensus 193 ~~~~i~~sT~s~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDffpYa~~~~~yWtGyyTSRp~~K~~~R~~e~~L~ 272 (913)
++++++||||+|||+||++. ...||+++||||||+|++++||||||||||.+|+++|+++++||
T Consensus 1 ~~v~v~ysT~s~Yf~al~~~----------------~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~ 64 (84)
T 1o7d_B 1 IRVNVLYSTPACYLWELNKA----------------NLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQ 64 (84)
T ss_dssp CCEEEEECCHHHHHHHHHHT----------------CCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHH----------------CCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
T ss_conf 93789967999999999974----------------78886558770035679997504542077999999999799999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999850
Q 002518 273 ATEMMVALLLG 283 (913)
Q Consensus 273 ~aE~L~sla~~ 283 (913)
+||+|++++..
T Consensus 65 ~ae~L~~la~~ 75 (84)
T 1o7d_B 65 VCNQLEALAGP 75 (84)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHHHH
T ss_conf 99999998744
No 8
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=1.00 E-value=1 Score=148.98 Aligned_cols=111 Identities=21% Similarity=0.261 Sum_probs=82.5
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC---CCCCCCCCCCCHHHHCCCCC
Q ss_conf 987688878999751698521379998878999866237888863157532237987---41112563434654224474
Q 002518 785 PRSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRS---QCVSVVDEPLNLFSMFKGLA 861 (913)
Q Consensus 785 ~~~~s~l~~~lP~nvhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~---~~~~~~~~~v~l~~lf~~~~ 861 (913)
..+|+++..+||+|||||||+.|.+.+ ++||.+|+ | +.+++ .|+. +++|+|++||..|+
T Consensus 2 ~~~~s~l~~~LP~nvhLlTLe~~~~~~------------iLlRl~hl---~-e~~ed~~~~~s~--pv~v~l~~lF~~~~ 63 (126)
T 1o7d_E 2 RTQFSGLRRELPPSVRLLTLARWGPET------------LLLRLEHQ---F-AVGEDSGRNLSS--PVTLDLTNLFSAFT 63 (126)
T ss_dssp CCEECSBSSCCCTTCEEEEEEEEETTE------------EEEEEECC---C-CTTTTTTTTCSS--CEEEECSSSBSSSE
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCC------------EEEEEEEE---C-CCCCCCCCCCCC--CEEEEHHHHHCCCC
T ss_conf 655476333499828678989868996------------99997720---4-256675433575--16885899515064
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCC---------CCCCCEEECCCEEEEEEEEEEECC
Q ss_conf 0368872354732334646888765688---------899835853642248999985479
Q 002518 862 ILNAKATSLNLLNDDIGMLGYPEQLEDV---------SQDGQVTIAPMEIQAYKLEMRPNE 913 (913)
Q Consensus 862 v~~~~etsL~~~~~~~~~~~~~~~~~~~---------~~~~~v~l~Pmei~tf~~~~~~~~ 913 (913)
|.+++||+|++++...++.+|+|..... .....|+|.|||||||+|++++++
T Consensus 64 i~~i~EttLtgn~~~~~~~Rl~w~~~~~~~~~~~~~~~~~~~vtL~PmEIRTFii~~~~~~ 124 (126)
T 1o7d_E 64 ITNLRETTLAANQLLAYASRLQWTTDTGPTPHPSPSRPVSATITLQPMEIRTFLASVQWEE 124 (126)
T ss_dssp EEEEEEECTTSSSBGGGCCCCCCCBC--------------CEEEECTTCEEEEEEEEEC--
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECC
T ss_conf 1369997363664521001010234787754556657777659976860799999987446
No 9
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=1.00 E-value=1 Score=56.04 Aligned_cols=49 Identities=18% Similarity=0.350 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEC
Q ss_conf 913667899999670999850175099998667899999839960567405
Q 002518 1 MHQIMEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRT 51 (913)
Q Consensus 1 IdQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri 51 (913)
++|+.+|.++++ .||+.|+..|.||. ++++.+|++++++||+++++.--
T Consensus 99 ~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 99 LVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSLREAGIEYVVVDDY 147 (659)
T ss_dssp HHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHHHHTTCCEEEEEHH
T ss_pred HHHHHHHHHHHH-HCCCCCCEEECCCC-CCCHHHHHHHHHCCCCEEEECCH
T ss_conf 999999999999-74997888987623-56766999999869939998733
No 10
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=1.00 E-value=1 Score=45.17 Aligned_cols=264 Identities=16% Similarity=0.148 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCH-----------------HHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC
Q ss_conf 1366789999967099985017509999866-----------------78999998399605674058889999854275
Q 002518 2 HQIMEGNMWLNDTIGFIPKNSWAIDPFGYSA-----------------TMAYLLRRMGFENMLIQRTHYELKKELALHQN 64 (913)
Q Consensus 2 dQl~~Gh~~l~~~fG~~p~vgW~iDpFGhS~-----------------~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~ 64 (913)
.|+..|.+.+++.||..|+..|.+.. ++++ .+..+++++||+++++---... ...+.
T Consensus 180 ~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~y~~vd~~~~~-----~~~~~ 253 (540)
T 3p0b_A 180 AQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKPPVEGPPEGVRPGVDELLMRAGIRYTFVDAHLVQ-----GGEPL 253 (540)
T ss_dssp HHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECCSSSCSCCEEECCHHHHHHHTTCCEEEECTHHHH-----CSSCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCC-CEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHC-----CCCCC
T ss_conf 99999999999980999998989422-1307655555543333331312999999859949998845541-----68888
Q ss_pred EEE---EEEECCC---------CCCCCCEEEEECCCCCCCC--C--CCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCC
Q ss_conf 589---9974799---------9999852783079865689--9--8779999510012212---358743346988889
Q 002518 65 LEY---IWRQSWD---------TEETSDIFVHMMPFYSYDI--P--HTCGPEPAVCCQFDFA---RMGGFFYEACPWRQN 125 (913)
Q Consensus 65 leF---~Wr~~~~---------~~~~s~ifth~lp~y~Y~~--p--~~c~p~~~~c~~fDf~---~~~g~~~~~c~~~~~ 125 (913)
-.+ +..+..+ .+++-.+|.--.. -|.+| + +|.| +|.. -||. ...|+.+-.-.|..-
T Consensus 254 p~yG~~~~~p~~~~~~py~v~~~~~~i~vf~RD~~-lS~~VWS~~~GYPG-d~~Y---ReF~rd~~~tGfky~rit~~~~ 328 (540)
T 3p0b_A 254 SPYGEAALGPVESQEATYHVHELESGLRVLARNPE-TTLQVWSADYGYPG-EGLY---REFHRKDPLSGLHHWRVTHRKA 328 (540)
T ss_dssp CC--------CCCCGGGGSEEECTTSCEEEEBCHH-HHHHHHCTTTSGGG-STTS---BCSSCCCTTTCCCCBBCCSTTC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHH-HHHHCCCCCCCCCC-CHHH---HHHCCCCCCCCCEEECCCCCCC
T ss_conf 88776566643344453010258986699967877-77643455468999-8057---6540124456602413677657
Q ss_pred C----CCCCHHH----HHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCC-CCCHHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 9----7798112----999999999999861254467849997049-989-99813379999969999999943999742
Q 002518 126 P----VETNQEN----VQERALKLLDQYKKKSTLYRTNTLLVPLGD-DFR-YTTINEAEAQFRNYQLLFDYINSNPSLNA 195 (913)
Q Consensus 126 p----~~i~~~n----v~~r~~~l~~~~~~~~~~~~tn~iL~p~G~-Df~-y~~~~~a~~~f~n~dkli~~iN~~~~~~~ 195 (913)
| .+-+++. +++-|..|+...+++........|.+++-. =|. +- .|+. .-++.+++.+.+. .
T Consensus 329 ~l~~K~pYdp~~A~~~~~~hA~~Fv~~l~~~~~~~~~~lvv~~~D~ElfGHww--~eG~---~fL~~l~r~l~~~----~ 399 (540)
T 3p0b_A 329 DLAEKAPYDPEAAFAKTEEHARHFVGLLERLAGRHPEGVILSPYDAELFGHWW--YEGV---AWLEAVLRLLAQN----P 399 (540)
T ss_dssp CGGGCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGBTTTB--TTHH---HHHHHHHHHHTTC----S
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCC--CHHH---HHHHHHHHHHHHC----C
T ss_conf 75456778999999999999999999999999745899899985524414684--5779---9999999987316----9
Q ss_pred EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89938988999999997510147899877899767897523873235446897524651371024568899999999999
Q 002518 196 EAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATE 275 (913)
Q Consensus 196 ~i~~sT~s~Yf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDffpYa~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE 275 (913)
.+++.|+++|.+.... .. . + ...+|-. .+.+..|.|=-.. +.-..+.++.+
T Consensus 400 ~i~~~T~se~L~~~~~----~~-~-~------~~sSWg~---------~g~~~~Wlg~~~~--------w~~~~l~~a~~ 450 (540)
T 3p0b_A 400 KVRPVTAREAVQGPAV----RT-A-L------PEGSWGR---------GGDHRVWLNEKTL--------DYWEKVYRAEG 450 (540)
T ss_dssp SEEECCHHHHTCSCEE----EC-C-C------CSBCSSG---------GGSSTTTSSGGGH--------HHHHHHHHHHH
T ss_pred CEEEECHHHHHHHCCC----CC-C-C------CCCCCCC---------CCCCCCCCCCHHH--------HHHHHHHHHHH
T ss_conf 8499779999975898----78-8-7------9977889---------9983736897799--------99999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC--C--CCCCHHH
Q ss_conf 99999850012333366861468999999999653202477--7--7885256
Q 002518 276 MMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDG--V--TGTAKDH 324 (913)
Q Consensus 276 ~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDa--I--tGTsk~~ 324 (913)
.+..++.. +. .. ...|+.|+|.|+++|-=|= | +||+.+.
T Consensus 451 ~m~~~~~~------~~-~~---~r~l~Qa~RELLlAesSDW~f~~~~~t~~~Y 493 (540)
T 3p0b_A 451 AMREAARR------GV-LP---EGVLRQAMRELLLLEASDWPFLMETGQAEAY 493 (540)
T ss_dssp HHHHHHHH------CC-SC---HHHHHHHHHHHHHHTBTHHHHTTTCTTTHHH
T ss_pred HHHHHHHC------CC-CC---HHHHHHHHHHHHHHHHCCCHHHCCCCCCHHH
T ss_conf 99998622------65-53---9999999999999984813877269984688
Done!