BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002521
(913 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 311/698 (44%), Positives = 445/698 (63%), Gaps = 22/698 (3%)
Query: 226 MRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQY 285
+ ++QR + P +M FRK LPS+ ++ L+ I +QV VISGETGCGKTTQ+ Q+
Sbjct: 178 LEDLQRK-KTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQF 236
Query: 286 ILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGE--TVGYKVRLEG-MKGK 342
IL++ IE G+G+ C I+CTQPRRISA++V+ERV+ ER E G + GY++RL+ + K
Sbjct: 237 ILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRK 296
Query: 343 NTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLI 402
+L+CT+GI+L+ L SD L+ V+H+ +DEIHER + D L+ V+KDLL R DL++I
Sbjct: 297 QGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVI 356
Query: 403 LMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKL 462
LMSATLNAE FS YFG P IHIPGFT+PV + LED++E Y +Q + Q K
Sbjct: 357 LMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY---VPDQKEHRSQFKR 413
Query: 463 WKTQRQLLPRKRKNQITALVED---ALHKSNFENYSSRARDSLASWTADCIGFNLIEAVL 519
Q + R+ K + A+ ++ A K YS+ D L D + NLI A++
Sbjct: 414 GFMQGHV-NRQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALI 472
Query: 520 CHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFE 579
+I +E GA+LVF+ GW++IS L D L S + ++ L++ H MPT Q +F+
Sbjct: 473 RYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKS-DKFLIIPLHSLMPTVNQTQVFK 531
Query: 580 KAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQ 639
K PP +RKIV+ATN+AE SITI+D+V+V+D GK KET +D NN + W+S+A+A+Q
Sbjct: 532 KTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ 591
Query: 640 RRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAA 699
R+GRAGRVQPG CYHLY +YQLPE+LRTPL LCLQIK L++G I FLS
Sbjct: 592 RKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRL 651
Query: 700 LQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPV 759
+ PP AV ++ L + ALD++E LT LG L+ LPV+P +GKM++ GA+F C DPV
Sbjct: 652 MDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV 711
Query: 760 LTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE- 818
LTI + LS +DPF++P K+ +A+ + + + SDH+ +V A+EGW++A+R G YE
Sbjct: 712 LTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEK 771
Query: 819 -YCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLD----EDGGNNKLSHNQSLVRAVICSG 873
YCW FLS+ TLQ +H+++ QF L AG + +D N S N+ +++AVIC+G
Sbjct: 772 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAG 831
Query: 874 LFPGITSVV----HRETSMSFKTMDDGQVFLYAVSVQV 907
L+P + + + + T DG V ++ SV V
Sbjct: 832 LYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNV 869
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 585 bits (1507), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/736 (43%), Positives = 458/736 (62%), Gaps = 44/736 (5%)
Query: 194 IDLAENVNMKENT-DSFLDGSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSF 252
ID ++EN D LD ++E LQ++ +R ++ M FR+ LPS+
Sbjct: 163 IDRDSEYLLQENEPDGTLDQKLLED-LQKKKNDLRYIE-----------MQHFREKLPSY 210
Query: 253 KEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAM 312
++ L+ I +QV VISGETGCGKTTQ+ Q+IL++ IE G+G+ C I+CTQPRRISA+
Sbjct: 211 GMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAI 270
Query: 313 AVSERVSAERGEPLG--ETVGYKVRLEG-MKGKNTHLLFCTSGILLRRLLSDHNLNGVTH 369
+V+ERV+AER E G + GY++RL+ + K +L+CT+GI+L+ L SD L+ V+H
Sbjct: 271 SVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSH 330
Query: 370 VFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFT 429
+ +DEIHER + D L+ V+KDLL R DL++ILMSATLNAE FS YFG P IHIPGFT
Sbjct: 331 IVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFT 390
Query: 430 YPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKS 489
+PV + LEDV+E Y Q + Q K Q + R+ K + ++A++K
Sbjct: 391 FPVVEYLLEDVIEKIRY---VPEQKEHRSQFKRGFMQGHV-NRQEKEE-----KEAIYKE 441
Query: 490 NFENYSSRARDSLASWTADCI--------GFNLIEAVLCHICRKECPGAVLVFMTGWEDI 541
+ +Y R ++ T D I NLI A++ +I +E GA+LVF+ GW++I
Sbjct: 442 RWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNI 501
Query: 542 SCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITI 601
S L D L S + ++ L++ H MPT Q +F++ PP +RKIV+ATN+AE SITI
Sbjct: 502 STLHDLLMSQVMFKS-DKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITI 560
Query: 602 NDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVY 661
+D+V+V+D GK KET +D NN + W+S+A+A+QR+GRAGRVQPG CYHLY
Sbjct: 561 DDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRA 620
Query: 662 EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGAL 721
+YQLPE+LRTPL LCLQIK L++G I FLS + PP AV ++ L + AL
Sbjct: 621 SLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNAL 680
Query: 722 DEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNL 781
D++E LT LG L+ LPV+P +GKM++ GA+F C DPVLTI + LS +DPF++P K+ +
Sbjct: 681 DKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKI 740
Query: 782 AEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE--YCWRNFLSAQTLQAIHSLRKQ 839
A+ + + SDH+ +V A+EGW++A R G YE YCW FLS+ TLQ +H+++ Q
Sbjct: 741 ADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 800
Query: 840 FTFILRDAGLLD----EDGGNNKLSHNQSLVRAVICSGLFPGITSVV----HRETSMSFK 891
F L AG + +D +N S N+ +++AVIC+GL+P + + + +
Sbjct: 801 FAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVY 860
Query: 892 TMDDGQVFLYAVSVQV 907
T DG V ++ SV V
Sbjct: 861 TKTDGLVAVHPKSVNV 876
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/748 (39%), Positives = 434/748 (58%), Gaps = 77/748 (10%)
Query: 231 RAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESE 290
R Q S + +L R+SLP+++E+E +L + ++QV+VISG TGCGKTTQ+PQ+IL+
Sbjct: 526 RMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDS 585
Query: 291 IESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCT 350
+ NIICTQPRRISA++V+ERV+ ER E +G TVGY++RLE +K T LL+CT
Sbjct: 586 LNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT 645
Query: 351 SGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNA 410
+G+LLRRL D L GV+H+ VDE+HER DFLL+VLKD++ +R L++ILMSATLNA
Sbjct: 646 TGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNA 705
Query: 411 ELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLL 470
ELFS+YF P I IPG T+PV FLED + +T Y L Y + ++ +L
Sbjct: 706 ELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRY---VLQDGSPYMRSMKQISKEKLK 762
Query: 471 PRKRKNQITALVED---ALHKSN---------------------FENYSSRARDSLASWT 506
R+ + + ED +LH + ++ S +++
Sbjct: 763 ARRNRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMD 822
Query: 507 ADCIGFNLIEAVLCHICRKE---CPGAVLVFMTGWEDISCLRDQLKSHPLLGD--PNRVL 561
+ + LIEA+L I + PGA+LVF+ G +I L +QL+S+ L + NR +
Sbjct: 823 FEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCV 882
Query: 562 LLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDAL 621
+ H S+ + EQ+ +F K P + KI+++TN+AE SITI+D+V+V+D GK KE YDA
Sbjct: 883 IHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAS 942
Query: 622 NNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVY-EAFAEYQLPELLRTPLNSL 680
L +++SQA+A QR+GRAGRV G C+HL+ Y + QLPE+ R PL L
Sbjct: 943 KGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQL 1002
Query: 681 CLQIKSLQVGS---IGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSML 737
CL+IK L++ S + S ++PP +++ + L+ +GAL E LT LG L+ L
Sbjct: 1003 CLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASL 1062
Query: 738 PVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDH 797
PVD ++GK+++ G+IFRC DP LTI + L+ + PF+ P +KK A K F+ + SD+
Sbjct: 1063 PVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDY 1121
Query: 798 MALVRAYEGWKDAEREG--SGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDE--- 852
+AL++AY+GW+ + +EG + Y YC +NFLS + LQ + SL++QFT +L D G E
Sbjct: 1122 LALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLR 1181
Query: 853 --------DGGN----------NKLSHNQSLVRAVICSGLFPGITSVVHRE--------- 885
GG+ N + N L+ A++C+ L+P + V E
Sbjct: 1182 AREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTG 1241
Query: 886 --------TSMSFKTMDDGQVFLYAVSV 905
+ F T +DG V ++ SV
Sbjct: 1242 AVRMQPKSAELKFVTKNDGYVHIHPSSV 1269
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 290/759 (38%), Positives = 437/759 (57%), Gaps = 86/759 (11%)
Query: 222 RSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQ 281
R QM+ R + + +L R+ LP+++E+E +L+ ++++QV+VISG TGCGKTTQ
Sbjct: 524 RQFQMKQASRQF------HAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQ 577
Query: 282 LPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG 341
+PQ+IL++ + NIICTQPRRISA++V+ERV+ ER E +G TVGY++RLE +K
Sbjct: 578 IPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKS 637
Query: 342 KNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRL 401
T LL+CT+G+LLRRL D L GVTH+ VDE+HER DFLL+VLKD++ +R L++
Sbjct: 638 SATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQV 697
Query: 402 ILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTS----LNQVDDY 457
ILMSATL+A LFS YF P I IPG +PV FLED L +T Y L + +
Sbjct: 698 ILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQI 757
Query: 458 GQEKLWKTQRQLLPRKRKNQITALVEDALHKSN----------------------FENYS 495
+EKL R + ++ + +LH + ++ S
Sbjct: 758 AKEKLKARHN----RTAQEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGVS 813
Query: 496 SRARDSLASWTADCIGFNLIEAVLCHICRKEC---PGAVLVFMTGWEDISCLRDQLKSHP 552
+++ + + LIEA+L I + PGAVLVF+ G +I L +QL+S+
Sbjct: 814 KSVIKTMSVMDFEKVNLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNS 873
Query: 553 LLGD--PNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDC 610
L + +R ++ H S+ + EQ+ +F K P + KI+++TN+AE SITI+D+V+V+D
Sbjct: 874 LFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDS 933
Query: 611 GKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVY-EAFAEYQL 669
GK KE YDA L +++SQA+A QR+GRAGRV G C+HL+ Y + QL
Sbjct: 934 GKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQL 993
Query: 670 PELLRTPLNSLCLQIKSLQVGS---IGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKEN 726
PE+ R PL LCL+IK L++ S + S ++PP +++ + L+ +GAL E
Sbjct: 994 PEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEK 1053
Query: 727 LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAK 786
LT LG L+ LPVD ++GK++++G+IFRC DP LTI + L+ + PF+ P +KK A K
Sbjct: 1054 LTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKK 1113
Query: 787 SRFSAKDYSDHMALVRAYEGWKDAEREG--SGYEYCWRNFLSAQTLQAIHSLRKQFTFIL 844
F+ + SD++AL+ AY+GW+ + +E + Y YC +NFLS +TLQ + SL++QFT +L
Sbjct: 1114 LEFAFAN-SDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELL 1172
Query: 845 RDAGLLDE-----------DGGN----------NKLSHNQSLVRAVICSGLFP------- 876
D G + E GG+ N + N L+ AV+C+ L+P
Sbjct: 1173 SDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKT 1232
Query: 877 ----------GITSVVHRETSMSFKTMDDGQVFLYAVSV 905
G+ + + + F T +DG V ++ SV
Sbjct: 1233 PEGKFQKTSSGVVRLQPKSAELKFVTKNDGYVHIHPSSV 1271
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/688 (39%), Positives = 412/688 (59%), Gaps = 35/688 (5%)
Query: 226 MRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQY 285
+RN+ R ++S + ++L+ R+ LP F +L+ + R++VIV++GETG GK+TQ+PQ+
Sbjct: 543 IRNIFRKSRDSMKYKRLLNDREQLPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQF 602
Query: 286 ILESEI-ESGRGAFCNIICTQPRRISAMAVSERVSAERG---EPLGET--VGYKVRLEGM 339
+LE + G CNI+CTQPRRISAM+++ RV E G P G+ GY++R+E
Sbjct: 603 LLEDLLFNGGSPGKCNIVCTQPRRISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESR 662
Query: 340 KGKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDL 399
G+ T LL+CT+GILLR+L D L ++H+ VDE+HER + DFLLI+L+++L +R DL
Sbjct: 663 TGEATRLLYCTTGILLRKLQEDSMLKNISHIIVDEVHERTVQSDFLLIILREILHKRSDL 722
Query: 400 RLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQ 459
L+LMSAT++ E FS+YF P I I G T+PV+ LEDV+E TG+ L Q +Y Q
Sbjct: 723 HLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLEDVVEATGF---VLEQDSEYCQ 779
Query: 460 EKLWKTQRQLLP--------RKRKNQITALVEDALH-KSNFENYSSRARDSLASWTADCI 510
+ L + L +K + I A L + ++ YSS+ R ++ + I
Sbjct: 780 KFLEDEEEITLSVTGKGGSSKKYQEFIPAQSGTGLDLGARYQRYSSQTRHAVLYMNPNKI 839
Query: 511 GFNLIEAVLCHIC----RKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCH 566
+LI +L + + GAVL+F+ G DI L D L S D R L+ H
Sbjct: 840 NLDLILELLVFLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALH 899
Query: 567 GSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPC 626
+ + +Q F P RKIVLATN+AE ITI D+VFV+D G+ KE Y +
Sbjct: 900 SILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSS 959
Query: 627 LLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKS 686
L+ ++IS+ASA QR+GRAGRV+ G C+ LY R +E+F EY +PE+LR PL LCL I
Sbjct: 960 LVETFISKASALQRQGRAGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMK 1019
Query: 687 LQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALD-EKENLTNLGKFLSMLPVDPKLGK 745
+GS +FLS AL PP+ + NA+ L++IGA + + LT LG+ L+ LPV+ K+GK
Sbjct: 1020 CDLGSPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGK 1079
Query: 746 MLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYE 805
ML+ GAIF C D V T+ + ++ + PF+ P +K+ A++AKS + + SDH+ + RAY
Sbjct: 1080 MLIFGAIFGCLDAVATLAATMTEKSPFVTPIGEKDRADLAKSSMAVAN-SDHVTIFRAYL 1138
Query: 806 GWKDAEREGSGYE--YCWRNFLSAQTLQAIHSLRKQFTFILRDAGL-----LDEDGGNNK 858
GWK EG E YC +NFL+ + L I ++++ ++R AG ++ +G ++
Sbjct: 1139 GWKAIRPEGYAAEMSYCRKNFLNRKALLTIEDVKQELIRLVRAAGFECPRSVEANGLSSA 1198
Query: 859 L----SHNQSLVRAVICSGLFPGITSVV 882
+ + SL++A++ +GL+ + ++
Sbjct: 1199 MKALSAEETSLLKAILTAGLYDNVGKIL 1226
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/697 (38%), Positives = 420/697 (60%), Gaps = 45/697 (6%)
Query: 226 MRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQY 285
+RN+ R Q +P+ K+L R+ LP FK ++ +++ + R++V+V++GETG GK+TQ+P +
Sbjct: 549 VRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHF 608
Query: 286 ILE----SEIESGRGAFCNIICTQPRRISAMAVSERVSAERG---EPLGET--VGYKVRL 336
+LE +E E+ + CNI+CTQPRRISA++++ RV E G P G GY++R+
Sbjct: 609 LLEDLLLNEWEASK---CNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRM 665
Query: 337 EGMKGKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRR 396
E ++T LL+CT+G+LLR+L D L+ V+HV VDE+HER + DFLLI+LK++L +R
Sbjct: 666 ESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKR 725
Query: 397 RDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDD 456
DL LILMSAT+++E FS YF P + I G +YPV+ LED++E TG+ L + +
Sbjct: 726 SDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGF---VLEKDSE 782
Query: 457 YGQEKLWKTQRQLLPRK------RKNQITALVEDALHKS---NFENYSSRARDSLASWTA 507
Y Q+ L + + + +K Q V+ H ++ YSSR + ++
Sbjct: 783 YCQKFLEEEEEVTINVTSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNP 842
Query: 508 DCIGFNLIEAVLCHICR----KECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLL 563
I +LI +L ++ + + GAVL+F+ G I L D L + R ++
Sbjct: 843 HKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYS-ERYKVI 901
Query: 564 TCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNN 623
H + T +Q F PP +RKIVLATN+AE ITI D+VFV+D G+ KE Y +
Sbjct: 902 ALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQ 961
Query: 624 TPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQ 683
L+ +++S+ASA QR+GRAGRV+ G C+ +Y R +E F +Y +PE+LR PL LCL
Sbjct: 962 MSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLH 1021
Query: 684 IKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKE-NLTNLGKFLSMLPVDPK 742
I +GS +FLS AL PP+ + NA++ L++IGA + E LT LG+ L+ LPV+ K
Sbjct: 1022 IMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVK 1081
Query: 743 LGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVR 802
+GKML+ GAIF C DPV T+ + ++ + PF P +K+ A++AKS + D SDH+ +
Sbjct: 1082 IGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHLTIYN 1140
Query: 803 AYEGWKDAEREGSGYE----YCWRNFLSAQTLQAIHSLRKQFTFILRDAGLL-------- 850
AY GWK A +EG GY YC RNFL+ +L + ++++ +++ AG
Sbjct: 1141 AYLGWKKARQEG-GYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSW 1199
Query: 851 DEDGGNNKLSHNQ-SLVRAVICSGLFPGITSVVHRET 886
+ + + LS + +L++AV+ +GL+ + +++ ++
Sbjct: 1200 EGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKS 1236
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 299/788 (37%), Positives = 433/788 (54%), Gaps = 100/788 (12%)
Query: 150 RRPQREVVIPLSLQRRVEGLLQEHLDRTQLSSGKISEKSEE-----------SKPIDLAE 198
RRP + +P + R++E L + + + ++ +S++ S PI
Sbjct: 343 RRPC-TIQVPEPILRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKP 401
Query: 199 NVNMKENTDSFLDGSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERL 258
V + E + L S++E + +RR WQE+P+ LP ++ +
Sbjct: 402 YVPLLEAEEVRLSQSLLE-LWRRRG-------PVWQEAPQ----------LPVDPHRDTI 443
Query: 259 LQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERV 318
L AI ++ V+VISG+TGCGKTT++PQ +LE + GRGA CN+I TQPRRISA++V++RV
Sbjct: 444 LNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRV 503
Query: 319 SAERGEPLGETVGYKVRLEGMK-GKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHE 377
S E G L VG++VRLE + LLFCT GILLR+L S+ +L GV+HV VDE+HE
Sbjct: 504 SHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHE 563
Query: 378 RGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFL 437
R +N DFLLI+LK L LRL+LMSAT + E FS YFGG P I +PGF YPV+ H+L
Sbjct: 564 RDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYL 623
Query: 438 EDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSR 497
ED+L G + Q L R R ++
Sbjct: 624 EDILAKLG--------------------KHQYLHRHRHHE-------------------- 643
Query: 498 ARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDP 557
+ D A + +L+ ++ HI + PG +L F+ GW++I ++ +L+ L
Sbjct: 644 SEDECA------LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE-ALGMHE 696
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
++ L+L H ++P +QK IF++ P +RKIVLATN+AE SITINDIV VVD G KE
Sbjct: 697 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEER 756
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPL 677
YD CL W+S+A+ QRRGRAGR Q G YHL+PR E +Q+PE+LRTPL
Sbjct: 757 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPL 816
Query: 678 NSLCLQIK-SLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
+L LQ K + + EFLS A+ P AV AV L+ IG LD++E LT LG+ L+
Sbjct: 817 ENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 876
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSD 796
+ DP+L K +V+ AIFRC P+L +VS L+ RDPF + + + K+ S SD
Sbjct: 877 ISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSD 935
Query: 797 HMALVRAYEGWKDAER---EGSGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDE- 852
H+A VRA GW++ R S Y N L A +L+ IH L KQF+ + +A L+ +
Sbjct: 936 HLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKP 995
Query: 853 ------DGGNNKLSHNQSLVRAVICSGLFPGITSV----VHRE-----TSMSFKTMDDGQ 897
N+ S + LV+ V+ +GL+P + V V R+ S++++T G
Sbjct: 996 SDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGN 1054
Query: 898 VFLYAVSV 905
+ L+ ++
Sbjct: 1055 ILLHKSTI 1062
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 300/788 (38%), Positives = 434/788 (55%), Gaps = 100/788 (12%)
Query: 150 RRPQREVVIPLSLQRRVEGLLQEHLDRTQLSSGKISEKSEE-----------SKPIDLAE 198
RRP + +P + R++E L + + S ++ +S++ S PI
Sbjct: 343 RRPC-TIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKP 401
Query: 199 NVNMKENTDSFLDGSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERL 258
+ + E + L S++E L RR + WQE+P+ LP ++ +
Sbjct: 402 YMPLSEAEEVRLSQSLLE--LWRRRGPI------WQEAPQ----------LPVDPHRDTI 443
Query: 259 LQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERV 318
L AI ++ V+VISG+TGCGKTT++PQ +LE + GRGA CN+I TQPRRISA++V++RV
Sbjct: 444 LSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRV 503
Query: 319 SAERGEPLGETVGYKVRLEGMK-GKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHE 377
S E G L VG++VRLE + LLFCT GILLR+L S+ +L GV+HV VDE+HE
Sbjct: 504 SHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHE 563
Query: 378 RGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFL 437
R +N DFLLI+LK L LRL+LMSAT + E FS YFGG P I +PGF YPV+ H+L
Sbjct: 564 RDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYL 623
Query: 438 EDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSR 497
ED+L KL K Q P + ++ H+S E
Sbjct: 624 EDILA------------------KLGKHQ---YPHRHRH----------HESEDEC---- 648
Query: 498 ARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDP 557
+ +L+ ++ HI + PG +L F+ GW++I ++ +L+ L
Sbjct: 649 -----------ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE-ALGMHE 696
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
++ L+L H ++P +QK IF++ P +RKIVLATN+AE SIT+NDIV VVD G KE
Sbjct: 697 SKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEER 756
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPL 677
YD CL W+S+A+ QRRGRAGR Q G YHL+PR E +Q+PE+LRTPL
Sbjct: 757 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPL 816
Query: 678 NSLCLQIK-SLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
+L LQ K + + EFLS A+ P AV AV L+ IG LD++E LT LG+ L+
Sbjct: 817 ENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 876
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSD 796
+ DP+L K +V+ AIFRC P+L +VS L+ RDPF + + + K+ S SD
Sbjct: 877 ISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSD 935
Query: 797 HMALVRAYEGWKDAER---EGSGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDE- 852
H+A VRA GW++ R S Y N L A +L+ IH L KQF+ + +A L+ +
Sbjct: 936 HLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKP 995
Query: 853 ------DGGNNKLSHNQSLVRAVICSGLFPGITSV----VHRE-----TSMSFKTMDDGQ 897
N+ S + LV+ V+ +GL+P + V V R+ S++++T G
Sbjct: 996 SDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGN 1054
Query: 898 VFLYAVSV 905
+ L+ ++
Sbjct: 1055 ILLHKSTI 1062
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2
SV=1
Length = 1220
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 301/788 (38%), Positives = 433/788 (54%), Gaps = 100/788 (12%)
Query: 150 RRPQREVVIPLSLQRRVEGLLQEHLDRTQLSSGKISEKSEE-----------SKPIDLAE 198
RRP + +P + R++E L + + S ++ + E+ S PI
Sbjct: 369 RRPC-TIQVPEPILRKIETFLNHYPVESSWISSELRLQGEDILPLGKDSGPLSDPITGKP 427
Query: 199 NVNMKENTDSFLDGSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERL 258
V + E + L S++E + +RR WQE+P+ LP ++ +
Sbjct: 428 YVPLSEAEELRLSQSLLE-LWRRRG-------PVWQEAPQ----------LPVDPHRDTI 469
Query: 259 LQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERV 318
L AI ++ V+VI+G+TGCGKTT++PQ +LE + GRGA CN+I TQPRRISA++V++RV
Sbjct: 470 LNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRV 529
Query: 319 SAERGEPLGETVGYKVRLEGMK-GKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHE 377
S E G L VG++VRLE + LLFCT GILLR+L S+ +L GV+HV VDE HE
Sbjct: 530 SHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEEHE 589
Query: 378 RGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFL 437
R +N DFLLI+LK L LRL+LMSAT + E FS YFGG P I +PGF YPV+ H+L
Sbjct: 590 RDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYL 649
Query: 438 EDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSR 497
ED+L KL K Q P + ++ H+S E
Sbjct: 650 EDILA------------------KLGKHQ---YPHRHRH----------HESEDEC---- 674
Query: 498 ARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDP 557
+ +L+ ++ HI + PG +L F+ GW++I ++ +L+ L
Sbjct: 675 -----------ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQ-EALGMHE 722
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
++ L+L H ++P +QK IF++ P +RKIVLATN+AE SITINDIV VVD G KE
Sbjct: 723 SKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEER 782
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPL 677
YD CL W+S+A+ QRRGRAGR Q G YHL+PR E A +Q+PE+LRTPL
Sbjct: 783 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPL 842
Query: 678 NSLCLQIK-SLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
+L LQ K + + EFLS A+ P AV AV L+ IG LD++E LT LG+ L+
Sbjct: 843 ENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 902
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSD 796
+ DP+L K +V+ AIFRC P+L +VS L+ RDPF + + + K+ S SD
Sbjct: 903 ISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSD 961
Query: 797 HMALVRAYEGWKDAER---EGSGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDE- 852
H+A VRA GW++ R S Y N L A +L+ IH L KQF+ + +A L+ +
Sbjct: 962 HLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKP 1021
Query: 853 ------DGGNNKLSHNQSLVRAVICSGLFPGITSV----VHRE-----TSMSFKTMDDGQ 897
N+ S + LV+ V+ +GL+P + V V R+ S++++T G
Sbjct: 1022 SDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGN 1080
Query: 898 VFLYAVSV 905
+ L+ ++
Sbjct: 1081 ILLHKSTI 1088
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 300/788 (38%), Positives = 434/788 (55%), Gaps = 100/788 (12%)
Query: 150 RRPQREVVIPLSLQRRVEGLLQEHLDRTQLSSGKISEKSEE-----------SKPIDLAE 198
RRP + +P + R++E L + + S ++ +S++ S PI
Sbjct: 366 RRPC-TIQVPEPILRKIEAFLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKP 424
Query: 199 NVNMKENTDSFLDGSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERL 258
+ + E + L S++E L RR + WQE+P+ LP ++ +
Sbjct: 425 YMPLSEAEEVRLSQSLLE--LWRRRGPI------WQEAPQ----------LPVDPHRDTI 466
Query: 259 LQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERV 318
L AI ++ V+VISG+TGCGKTT++PQ +LE + GRGA CN+I TQPRRISA++V++RV
Sbjct: 467 LSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRV 526
Query: 319 SAERGEPLGETVGYKVRLEGMK-GKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHE 377
S E G L VG++VRLE + LLFCT GILLR+L S+ +L GV+HV VDE+HE
Sbjct: 527 SHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHE 586
Query: 378 RGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFL 437
R +N DFLLI+LK L LRL+LMSAT + E FS YFGG P I +PGF YPV+ H+L
Sbjct: 587 RDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYL 646
Query: 438 EDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSR 497
ED+L KL K Q P + ++ H+S E
Sbjct: 647 EDILA------------------KLGKHQ---YPHRHRH----------HESEDEC---- 671
Query: 498 ARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDP 557
+ +L+ ++ HI + PG +L F+ GW++I ++ +L+ L
Sbjct: 672 -----------ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA-LGMHE 719
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
++ L+L H ++P +QK IF++ P +RKIVLATN+AE SIT+NDIV VVD G KE
Sbjct: 720 SKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEER 779
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPL 677
YD CL W+S+A+ QRRGRAGR Q G YHL+PR E +Q+PE+LRTPL
Sbjct: 780 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPL 839
Query: 678 NSLCLQIK-SLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
+L LQ K + + EFLS A+ P AV AV L+ IG LD++E LT LG+ L+
Sbjct: 840 ENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 899
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSD 796
+ DP+L K +V+ AIFRC P+L +VS L+ RDPF + + + K+ S SD
Sbjct: 900 ISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSD 958
Query: 797 HMALVRAYEGWKDAER---EGSGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDE- 852
H+A VRA GW++ R S Y N L A +L+ IH L KQF+ + +A L+ +
Sbjct: 959 HLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKP 1018
Query: 853 ------DGGNNKLSHNQSLVRAVICSGLFPGITSV----VHRE-----TSMSFKTMDDGQ 897
N+ S + LV+ V+ +GL+P + V V R+ S++++T G
Sbjct: 1019 SDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGN 1077
Query: 898 VFLYAVSV 905
+ L+ ++
Sbjct: 1078 ILLHKSTI 1085
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 298/788 (37%), Positives = 431/788 (54%), Gaps = 100/788 (12%)
Query: 150 RRPQREVVIPLSLQRRVEGLLQEHLDRTQLSSGKISEKSEE-----------SKPIDLAE 198
RRP + +P + R++E L + + + ++ +S++ S PI
Sbjct: 343 RRPC-TIQVPEPILRKIETFLNHYPVESSWIAPELRLQSDDILPLGKDSGPLSDPITGKP 401
Query: 199 NVNMKENTDSFLDGSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERL 258
V + E + L S++E + +RR WQE+P+ LP ++ +
Sbjct: 402 YVPLLEAEEVRLSQSLLE-LWRRRG-------PVWQEAPQ----------LPVDPHRDTI 443
Query: 259 LQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERV 318
L AI ++ V+VISG+TGCGKTT++PQ +LE + GRGA CN+I TQPRRISA++V++RV
Sbjct: 444 LNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRV 503
Query: 319 SAERGEPLGETVGYKVRLEGMK-GKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHE 377
S E G L VG++VRLE + LLFCT GILLR+L S+ +L GV+HV VDE+HE
Sbjct: 504 SHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHE 563
Query: 378 RGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFL 437
R +N DFLLI+LK L LRL+LMSAT + E FS YFGG P I +PGF YPV+ H+L
Sbjct: 564 RDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYL 623
Query: 438 EDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSR 497
ED+L G + Q L R R H+S E
Sbjct: 624 EDILAKLG--------------------KHQYLHRHRH-----------HESEDEC---- 648
Query: 498 ARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDP 557
+ +L+ ++ HI + PG +L F+ GW++I ++ +L+ L
Sbjct: 649 -----------ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE-ALGMHE 696
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
++ L+L H ++P +QK IF++ P +RKIVLATN+AE S TINDIV VVD G KE
Sbjct: 697 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEER 756
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPL 677
YD CL W+S+A+ QRRGRAGR Q G YHL+PR E +Q+PE+LRTPL
Sbjct: 757 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPL 816
Query: 678 NSLCLQIK-SLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
+L LQ K + + EFLS A+ P AV AV L+ IG LD++E LT LG+ L+
Sbjct: 817 ENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAH 876
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSD 796
+ +P+L K +V+ AIFRC P+L +VS L+ RDPF + + + K+ S SD
Sbjct: 877 ISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSD 935
Query: 797 HMALVRAYEGWKDAER---EGSGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDE- 852
H+A VRA GW++ R S Y N L A +L+ IH L KQF+ + +A L+ +
Sbjct: 936 HLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKP 995
Query: 853 ------DGGNNKLSHNQSLVRAVICSGLFPGITSV----VHRE-----TSMSFKTMDDGQ 897
N+ S + LV+ V+ +GL+P + V V R+ S++++T G
Sbjct: 996 SDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT-KSGN 1054
Query: 898 VFLYAVSV 905
+ L+ ++
Sbjct: 1055 ILLHKSTI 1062
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust.
Identities = 287/810 (35%), Positives = 458/810 (56%), Gaps = 49/810 (6%)
Query: 111 DYEQISFLAKRMGLYSQVYGKAVVVSKFPLPNYRP---DLDDRRPQREVVIPLSLQRRVE 167
D Q L + LY V G++V + P YR + D +RE + + + +
Sbjct: 430 DGMQAQHLGATLALYRLVKGQSV--HQLLPPTYRDVWLEWSDEEKKREELNKMETNKPRD 487
Query: 168 GLLQEHLDRTQLSSGKI------SEKSEESKPIDLAENVNMKENTDSFLDGSVMEKVLQR 221
+ + L++ + + SEK P + EN+ +D L +E
Sbjct: 488 LFIAKLLNKLKQQQQQQQQQRPESEKGGSEDPEESWENLV----SDEDLAALSLEPTSAE 543
Query: 222 RSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQ 281
+R++ R Q +P+ ++L R+ LP FK ++ +++ + R++V+V++GETG GK+TQ
Sbjct: 544 DLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQ 603
Query: 282 LPQYILESEIESGRGAF-CNIICTQPRRISAMAVSERVSAERG---EPLGET--VGYKVR 335
+P ++LE + GA CNI+CTQPRRISA++++ RV E G P G GY++R
Sbjct: 604 VPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIR 663
Query: 336 LEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPR 395
+E ++T LL+CT+G+LLR+L D L V+HV VDE+HER + DFLL++LK++L +
Sbjct: 664 MESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQK 723
Query: 396 RRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVD 455
R DL LILMSAT++++ FS YF P + I G +YPV+ LED++E TG+ L +
Sbjct: 724 RSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGF---VLEKDS 780
Query: 456 DYGQEKLWKTQRQLLPR-------KRKNQITALVEDALHKSN--FENYSSRARDSLASWT 506
+Y Q+ L + + + K+ + + A + N ++ YSSR + ++
Sbjct: 781 EYCQKFLEEEEEITINVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMN 840
Query: 507 ADCIGFNLIEAVLCHICR----KECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLL 562
I +LI +L ++ + + GAVL+F+ G I L D L S R +
Sbjct: 841 PHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYS-ERYQV 899
Query: 563 LTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALN 622
+ H + T +Q F PP +RKIVLATN+AE ITI D+VFV+D G+ KE Y +
Sbjct: 900 IALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESS 959
Query: 623 NTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCL 682
L+ +++S+ASA QR+GRAGRV+ G C+ LY R +E F +Y +PE+LR PL LCL
Sbjct: 960 QMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCL 1019
Query: 683 QIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKE-NLTNLGKFLSMLPVDP 741
I +GS +FLS AL PP+ + NA++ L++IGA + E LT LG+ L+ LPV+
Sbjct: 1020 HIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNV 1079
Query: 742 KLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALV 801
K+GKML+ GAIF C +PV T+ + ++ + PF+ P +K+ A++AKS + D SDH+ +
Sbjct: 1080 KIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVAD-SDHLTIY 1138
Query: 802 RAYEGWKDAEREG---SGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDG---- 854
AY GWK A++EG S YC RNFL+ +L + ++++ +++ AG
Sbjct: 1139 NAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSWEGR 1198
Query: 855 -GNNKLS-HNQSLVRAVICSGLFPGITSVV 882
G LS + +L++AV+ +GL+ + ++
Sbjct: 1199 KGPQTLSFQDIALLKAVLAAGLYDSVGKIM 1228
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=2
SV=2
Length = 1293
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 271/695 (38%), Positives = 403/695 (57%), Gaps = 34/695 (4%)
Query: 227 RNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYI 286
R+++ Q E + L+FR+ LP + +L AI N V++I G TGCGKTTQ+ QYI
Sbjct: 362 RSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYI 421
Query: 287 LESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGK-NTH 345
L+ I SG+G + NI TQPRRISA++V+ERV+ ER E LG+TVGY VR E + +
Sbjct: 422 LDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGA 481
Query: 346 LLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMS 405
+LFCT G+LLR+L + L GV+H+ VDEIHER +N DFLL++L+D++ DL +ILMS
Sbjct: 482 ILFCTVGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMS 539
Query: 406 ATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKT 465
AT++ FS YFG P + +PG +PVQ FLED+++MT + + + + K +
Sbjct: 540 ATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDF----VPSAESRRKRKEVED 595
Query: 466 QRQLLPRKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRK 525
+ QLL + E +K + YS + R+++A + + F L+EA+L HI K
Sbjct: 596 EEQLLSEDKDE-----AEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSK 650
Query: 526 ECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNI 585
PGA+LVF+ GW I L L++ + GD ++ +L CH +P EQ+ +FE P +
Sbjct: 651 NIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGV 710
Query: 586 RKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAG 645
KI+L+TN+AE SITI+DIVFV+D KA+ + + NN W S+ + QR+GRAG
Sbjct: 711 TKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAG 770
Query: 646 RVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEP 705
RV+PG C+ L R ++A + PE+ RTPL+ + L IK L++GSI FLS AL+PP
Sbjct: 771 RVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPV 830
Query: 706 LAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSG 765
AV A L+ + LD + LT LG+ L+ LP++P+LGKM+V+GA+F C D + + S
Sbjct: 831 DAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASY 890
Query: 766 LSV-RDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE--YCWR 822
S + F L ++ LA K+ S SDH+A++ A + W+ ++ G E +C
Sbjct: 891 SSTFSEVFSLDIGQRRLANHQKA-LSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDW 949
Query: 823 NFLSAQTLQAIHSLRKQFTFILRDAGLLDE-----------DGGNNKLSHNQSLVRAVIC 871
L T+ I ++Q +L+ AG +E DG + L + A++C
Sbjct: 950 KGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVL----DVSLALLC 1005
Query: 872 SGLFPGITSVVHRETSMSFKTMDDGQVFLYAVSVQ 906
GL+P I VH+E T + L+ SV
Sbjct: 1006 LGLYPNI--CVHKEKRKVL-TTESKAALLHKTSVN 1037
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 268/667 (40%), Positives = 380/667 (56%), Gaps = 81/667 (12%)
Query: 232 AWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEI 291
+WQES LP K+ +L AI +N V+VI+G+TGCGKTT++PQ +LE I
Sbjct: 471 SWQES----------HPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYI 520
Query: 292 ESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMK-GKNTHLLFCT 350
GRGA CN++ TQPRRISA++V++RV+ E G + + VGY+VRLE + LLFCT
Sbjct: 521 LEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCT 580
Query: 351 SGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNA 410
GILLR+L + +L GV+HV VDE+HER +N DFLLI+LK + DLRL+LMSAT +
Sbjct: 581 VGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDN 640
Query: 411 ELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTG---YKLTSLNQVDDYGQEKLWKTQR 467
+ FS+YFGG P + +PGF YPV+ ++LE++L G ++ + Q DD
Sbjct: 641 QRFSHYFGGCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDD----------- 689
Query: 468 QLLPRKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCI-GFNLIEAVLCHICRKE 526
+C+ +LI ++ I
Sbjct: 690 ----------------------------------------ECVLDLDLITDLVLQIDAHG 709
Query: 527 CPGAVLVFMTGWEDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNI 585
PG +L F+ GW++I ++ +L +LG N R L+L H ++P +Q+ IF++ PP +
Sbjct: 710 EPGGILCFLPGWQEIKGVQQRLLE--MLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGV 767
Query: 586 RKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAG 645
RKIVLATN+AE SITINDIV VVD G KE YD CL W+S+++ QRRGRAG
Sbjct: 768 RKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAG 827
Query: 646 RVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIK-SLQVGSIGEFLSAALQPPE 704
R Q G YHL+PR + YQ+PE+LRTPL +L +Q K + + EFLS AL P+
Sbjct: 828 RCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPD 887
Query: 705 PLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVS 764
AV AV L+ IG LD++E LT LGK L+ + DP+L K +V+ +I+RC P+L IVS
Sbjct: 888 IKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVS 947
Query: 765 GLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGY---EYCW 821
L+ RDPF + + + AK+ S + SDH+A VRA GW++ R Y
Sbjct: 948 CLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQ 1006
Query: 822 RNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGG-------NNKLSHNQSLVRAVICSGL 874
+L +L+ I+ L KQF+ L +A L+ N+ S + LV+ V+ +GL
Sbjct: 1007 DYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGL 1066
Query: 875 FPGITSV 881
+P + V
Sbjct: 1067 YPNLIQV 1073
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 265/755 (35%), Positives = 422/755 (55%), Gaps = 51/755 (6%)
Query: 179 LSSGKIS--EKSEESKPIDLAENVNMKENTDSFLDGSVMEKVL-----QRRSLQMRN-MQ 230
L+ GK++ E S+ P+ + + N + + ++ E L ++ S+ ++N +
Sbjct: 307 LNLGKLAQFEPSQRQNPVGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQISMDLKNELM 366
Query: 231 RAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESE 290
++ + +L R+ LP K + +L+AI++N V++I G TGCGKTTQ+PQ+IL+
Sbjct: 367 YQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDC 426
Query: 291 IESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGK-NTHLLFC 349
I++ R A CNI+ TQPRRISA++V+ERV+ ERGE G++ GY VR E + + + ++FC
Sbjct: 427 IQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFC 486
Query: 350 TSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLN 409
T G+LLR+L + + G++HV VDEIHER +N DFLL+VL+D++ ++R++LMSAT++
Sbjct: 487 TVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATID 544
Query: 410 AELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQL 469
+F YF P I + G T+PVQ +FLED ++MT +
Sbjct: 545 TSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTHFVPP-------------------- 584
Query: 470 LPRKRKNQITALVEDALHKSNF-----ENYSSRARDSLASWTADCIGFNLIEAVLCHICR 524
P+ +K + +N + Y + R S+A F LIEA+L +I
Sbjct: 585 -PKDKKKKDKDDDGGEDDDANCNLICGDEYGAETRISMAQLNEKETPFELIEALLLYIET 643
Query: 525 KECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPN 584
PGAVLVF+ GW I ++ L+ +P G +R +L H +P EQ+ +F+ P
Sbjct: 644 LNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRKVFDPVPSG 702
Query: 585 IRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRA 644
+ KI+L+TN+AE SITIND+V+V+D K K + A NN W S+ + QR+GRA
Sbjct: 703 VTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 762
Query: 645 GRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPE 704
GRV+PG C+HL R +E + PE+ RTPL+ + L IK L++G IG+FL+ A++PP
Sbjct: 763 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 822
Query: 705 PLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVS 764
AV A L+ + ALD + LT LG+ L+ LP++P+ GKM++MG IF D + TI +
Sbjct: 823 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISA 882
Query: 765 GLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE--YCWR 822
+PF+ E K L I ++ F+ +SDH+AL+ ++ W DA G E +C
Sbjct: 883 ATCFPEPFI--SEGKRLGYIHRN-FAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEH 939
Query: 823 NFLSAQTLQAIHSLRKQFTFILRDAG-----LLDEDGGNNKLSHNQSLVRAVICSGLFPG 877
L+ TL+ + Q IL ++G LL + N +N +V +++ G++P
Sbjct: 940 KRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYP- 998
Query: 878 ITSVVHRETSMSFKTMDDGQVFLYAVSVQVIVSNQ 912
+V + + T + ++ SV S+Q
Sbjct: 999 --NVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQ 1031
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 259/721 (35%), Positives = 408/721 (56%), Gaps = 44/721 (6%)
Query: 206 TDSFLD-GSVMEKVLQRRSLQMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIAR 264
T S +D G + ++ SL+++N + P ++L R+SLP K +E ++ A+
Sbjct: 346 TSSNIDEGPLAFATQEQISLELKNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHN 405
Query: 265 NQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGE 324
+ V++I G TGCGKTTQ+PQYIL+ I + R A CNI+ TQPRRISA++V+ERV+ ERGE
Sbjct: 406 SPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGE 465
Query: 325 PLGETVGYKVRLEGMKGK-NTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNED 383
+G++ GY VR E + + + +LFCT G+LLR+L S + G++HV VDEIHER +N D
Sbjct: 466 EIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLES--GIRGISHVIVDEIHERDINTD 523
Query: 384 FLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEM 443
FLL+VL+D++ ++R+ILMSAT++ +F YF P I + G T+PVQ ++LED ++M
Sbjct: 524 FLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQM 583
Query: 444 TGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNF-----ENYSSRA 498
T + PR +K + ++N ++Y
Sbjct: 584 TQFIPP---------------------PRDKKKKDKDEEGGDDEETNCNLVCGDDYGPET 622
Query: 499 RDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPN 558
R S++ + LIEA+L +I PGAVLVF+ GW I ++ L+ +P G +
Sbjct: 623 RRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGS-H 681
Query: 559 RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTY 618
+L H +P EQ+ +F+ P I K++L+TN+AE SITIND+V+V+D K K +
Sbjct: 682 SYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLF 741
Query: 619 DALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLN 678
+ NN W S+ + QR+GRAGRV+PG C+HL + ++ + PE+ RTPL+
Sbjct: 742 TSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLH 801
Query: 679 SLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLP 738
+ L IK L++G IG FLS A++PP AV A L+ + ALD + LT LG+ L+ LP
Sbjct: 802 EVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLP 861
Query: 739 VDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHM 798
++P+LGKM+++G IF D + TI + +PF+ E + L + ++ F+ +SDH+
Sbjct: 862 IEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFI--SEGRRLGYVHRN-FAGNRFSDHV 918
Query: 799 ALVRAYEGWKDAEREGSGYE--YCWRNFLSAQTLQAIHSLRKQFTFILRDAG-----LLD 851
AL+ ++ W DA G E +C L+ TL+ + Q IL +AG L++
Sbjct: 919 ALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEECLMN 978
Query: 852 EDGGNNKLSHNQSLVRAVICSGLFPGITSVVHRETSMSFKTMDDGQVFLYAVSVQVIVSN 911
+ N +N +V +++ G++P +V + + T + ++ SV SN
Sbjct: 979 QVFNNTGPDNNLDVVISLLAFGVYP---NVCYHKEKRKILTTEGRNALIHKSSVNCPFSN 1035
Query: 912 Q 912
Q
Sbjct: 1036 Q 1036
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/684 (36%), Positives = 390/684 (57%), Gaps = 43/684 (6%)
Query: 242 MLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNI 301
+L R+ LP K + +L+AI++N V++I G TGCGKTTQ+PQ+IL+ I++ R A CNI
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 302 ICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGK-NTHLLFCTSGILLRRLLS 360
+ TQPRRISA++V+ERV+ ERGE G++ GY VR E + + + ++FCT G+LLR+L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 498
Query: 361 DHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGA 420
+ + G++HV VDEIHER +N DFLL+VL+D++ ++R++LMSAT++ +F YF
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 558
Query: 421 PTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITA 480
P I + G TYPVQ +FLED ++MT + P+ +K +
Sbjct: 559 PIIEVYGRTYPVQEYFLEDCIQMTHFVPP---------------------PKDKKKKDKD 597
Query: 481 LVEDALHKSNF-----ENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFM 535
+N + Y R S++ F LIEA+L +I PGAVLVF+
Sbjct: 598 DDGGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL 657
Query: 536 TGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMA 595
GW I ++ L+ +P G +R +L H +P EQ+ +F+ P + K++L+TN+A
Sbjct: 658 PGWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIA 716
Query: 596 EASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHL 655
E SITIND+V+V+D K K + A NN W S+ + QR+GRAGRV+PG C+HL
Sbjct: 717 ETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHL 776
Query: 656 YPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFL 715
R +E + PE+ RTPL+ + L IK L++G IG+FL+ A++PP AV A L
Sbjct: 777 CSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTL 836
Query: 716 KRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLP 775
+ + ALD + LT LG+ L+ LP++P+ GKM++MG IF D + TI + +PF+
Sbjct: 837 RELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-- 894
Query: 776 QEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE--YCWRNFLSAQTLQAI 833
E K L I ++ F+ +SDH+AL+ ++ W DA G E +C L+ TL+
Sbjct: 895 NEGKRLGYIHRN-FAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMT 953
Query: 834 HSLRKQFTFILRDAG-----LLDEDGGNNKLSHNQSLVRAVICSGLFPGITSVVHRETSM 888
+ Q IL ++G LL + N +N +V +++ G++P +V + +
Sbjct: 954 WEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKR 1010
Query: 889 SFKTMDDGQVFLYAVSVQVIVSNQ 912
T + ++ SV S+Q
Sbjct: 1011 KILTTEGRNALIHKSSVNCPFSSQ 1034
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/684 (36%), Positives = 390/684 (57%), Gaps = 43/684 (6%)
Query: 242 MLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNI 301
+L R+ LP K + +L+AI++N V++I G TGCGKTTQ+PQ+IL+ I++ R A CNI
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 302 ICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGK-NTHLLFCTSGILLRRLLS 360
+ TQPRRISA++V+ERV+ ERGE G++ GY VR E + + + ++FCT G+LLR+L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 498
Query: 361 DHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGA 420
+ + G++HV VDEIHER +N DFLL+VL+D++ ++R++LMSAT++ +F YF
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 558
Query: 421 PTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITA 480
P I + G TYPVQ +FLED ++MT + P+ +K +
Sbjct: 559 PIIEVYGRTYPVQEYFLEDCIQMTHFVPP---------------------PKDKKKKDKD 597
Query: 481 LVEDALHKSNF-----ENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFM 535
+N + Y R S++ F LIEA+L +I PGAVLVF+
Sbjct: 598 DDGGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL 657
Query: 536 TGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMA 595
GW I ++ L+ +P G +R +L H +P EQ+ +F+ P + K++L+TN+A
Sbjct: 658 PGWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIA 716
Query: 596 EASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHL 655
E SITIND+V+V+D K K + A NN W S+ + QR+GRAGRV+PG C+HL
Sbjct: 717 ETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHL 776
Query: 656 YPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFL 715
R +E + PE+ RTPL+ + L IK L++G IG+FL+ A++PP AV A L
Sbjct: 777 CSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTL 836
Query: 716 KRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLP 775
+ + ALD + LT LG+ L+ LP++P+ GKM++MG IF D + TI + +PF+
Sbjct: 837 RELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-- 894
Query: 776 QEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE--YCWRNFLSAQTLQAI 833
E K L I ++ F+ +SDH+AL+ ++ W DA G E +C L+ TL+
Sbjct: 895 NEGKRLGYIHRN-FAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMT 953
Query: 834 HSLRKQFTFILRDAG-----LLDEDGGNNKLSHNQSLVRAVICSGLFPGITSVVHRETSM 888
+ Q IL ++G LL + N +N +V +++ G++P +V + +
Sbjct: 954 WEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYP---NVCYHKEKR 1010
Query: 889 SFKTMDDGQVFLYAVSVQVIVSNQ 912
T + ++ SV S+Q
Sbjct: 1011 KILTTEGRNALIHKSSVNCPFSSQ 1034
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/701 (36%), Positives = 394/701 (56%), Gaps = 53/701 (7%)
Query: 225 QMRNMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQ 284
Q N+Q QE R+ LP K + +L+AI+ N V++I G TGCGKTTQ+PQ
Sbjct: 376 QDHNLQSVLQE----------RELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQ 425
Query: 285 YILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGK-N 343
YIL+ I++ R A CNI+ TQPRRISA+AV+ERV+ ERGE G++ GY VR E + + +
Sbjct: 426 YILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPH 485
Query: 344 THLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLIL 403
++FCT G+LLR+L + + G++HV VDEIHER +N DFLL+VL+D++ ++R++L
Sbjct: 486 ASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVL 543
Query: 404 MSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLW 463
MSAT++ +F YF P I + G T+PVQ +FLED ++MT +
Sbjct: 544 MSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPP-------------- 589
Query: 464 KTQRQLLPRKRKNQITALVEDALHKSNF-----ENYSSRARDSLASWTADCIGFNLIEAV 518
P+ +K + +N + Y + S++ F LIEA+
Sbjct: 590 -------PKDKKKKDKEDDGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEAL 642
Query: 519 LCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIF 578
L +I PGAVLVF+ GW I ++ L+++ G +R +L H +P EQ+ +F
Sbjct: 643 LKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS-HRYQILPLHSQIPREEQRKVF 701
Query: 579 EKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASAR 638
+ P + K++L+TN+AE SITIND+V+V+D K K + A NN W S+ +
Sbjct: 702 DPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLE 761
Query: 639 QRRGRAGRVQPGQCYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSA 698
QR+GRAGRV+PG C+HL R ++ + PE+ RTPL+ + L IK L++G IG+FL+
Sbjct: 762 QRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAK 821
Query: 699 ALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDP 758
A++PP A+ A L+ + ALD + LT LG+ L+ LP++P+ GKM++MG IF D
Sbjct: 822 AIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDA 881
Query: 759 VLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE 818
V TI + +PF+ E K L I ++ F+ +SDH+AL+ ++ W DA G E
Sbjct: 882 VCTISAATCFPEPFI--SEGKRLGYIHRN-FAGNRFSDHVALLSVFQAWDDARMSGEEAE 938
Query: 819 --YCWRNFLSAQTLQAIHSLRKQFTFILRDAG-----LLDEDGGNNKLSHNQSLVRAVIC 871
+C + L+ TL+ + Q IL ++G LL + N +N +V +++
Sbjct: 939 IRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLA 998
Query: 872 SGLFPGITSVVHRETSMSFKTMDDGQVFLYAVSVQVIVSNQ 912
G++P +V + + T + ++ SV S+Q
Sbjct: 999 FGVYP---NVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQ 1036
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/690 (34%), Positives = 395/690 (57%), Gaps = 28/690 (4%)
Query: 240 NKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFC 299
+K+ R LP + +E ++Q +A N+V +I GETGCGK+TQ+ Q++LES +E+ GA
Sbjct: 372 DKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASF 431
Query: 300 NIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKN-THLLFCTSGILLRRL 358
N + +QPRRISA++++ERV+ ERGE +GET GY VR + + ++FCT G+LLR +
Sbjct: 432 NAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLRMM 491
Query: 359 LSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYF- 417
++ L G++HV +DEIHER ++ DF+LIVL++++ RDLR++LMSAT++ +LF+N+F
Sbjct: 492 --ENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFS 549
Query: 418 -----GGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPR 472
G P I + G T+PVQ+ +LED+L + L + + D Q+K K
Sbjct: 550 SIPDVGPTPVITMHGRTFPVQSFYLEDIL----HNLQHMPEEPD--QKKRKKGGPPPPDD 603
Query: 473 KRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVL 532
++ ++ + + + +++ + I F +IEA+L I + GAVL
Sbjct: 604 DEGDEEVDDKGRNMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVL 663
Query: 533 VFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLAT 592
VF+ GW +I L ++L H G N+ +L H + + EQ+ +F P RKI+++T
Sbjct: 664 VFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPGK-RKIIVST 722
Query: 593 NMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQC 652
N+AE SITI+D+V+V+D KAKE Y + NN W S+ + QRRGRAGRV+ G
Sbjct: 723 NIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYA 782
Query: 653 YHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAV 712
+HL + +EA ++ E+LR PL+ + L IK L++GS+GEFL ALQPP V +
Sbjct: 783 FHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPYDMVVESE 842
Query: 713 DFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPF 772
L+ +GALD LT+LGK L+ +P++P + K+L++G + + S +S PF
Sbjct: 843 AVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPF 902
Query: 773 LLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGY---EYCWRNFLSAQT 829
+ ++ + + +F+ +SDH+A+V +G+++A + G+ E+C R LS
Sbjct: 903 VPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPV 962
Query: 830 LQAIHSLRKQFTFILRDAGLLDED------GGNNKLSHNQSLVRAVICSGLFPGITSVVH 883
L+ R+Q +LR+ ED N +L+R+++ L+P + V
Sbjct: 963 LKMTDGARRQLIDVLRNQCSFPEDILFDISVNVNGPDRELNLMRSLLVMALYPNVAYYVG 1022
Query: 884 RETSMSFKTMDDGQVFLYAVSVQVIVSNQK 913
+ + T++ + S+ V ++N++
Sbjct: 1023 KRKVL---TIEQSSALINKYSMLVPMNNRQ 1049
>sp|P0C7L7|YUM14_USTMA Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM04112 PE=3 SV=1
Length = 1567
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 268/730 (36%), Positives = 418/730 (57%), Gaps = 76/730 (10%)
Query: 236 SPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGR 295
SP +KM + R+SLP+ +L I N+V++I+GETGCGKTTQ+PQ+IL+ IE+GR
Sbjct: 723 SPSYSKMDETRRSLPAASAAREILGLIRSNRVVIIAGETGCGKTTQVPQFILDEAIEAGR 782
Query: 296 GAFCNIICTQPRRISAMAVSERVSAERGEPL---------GETVGYKVRLEGMKGKNTHL 346
G+ CNI+ TQPRR+SA+ V+ RV+ ERGE L G VGY +R E + L
Sbjct: 783 GSECNIVVTQPRRVSAIGVASRVAVERGEKLDGKKKAVAPGSLVGYAIRGERRASRECRL 842
Query: 347 LFCTSGILLRRLLS--DHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILM 404
LF T+G+LLRRL + D +L G++HV VDE+HER ++ DFLL+ L++LL R ++++LM
Sbjct: 843 LFTTTGVLLRRLGAGGDTDLKGISHVVVDEVHERNVDSDFLLLELRELLRRNSRIKVVLM 902
Query: 405 SATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWK 464
SAT+N E F++YFG AP I IPG T+ V+ H+LED+++ +G++ + G E W+
Sbjct: 903 SATINQETFASYFGKAPCISIPGRTFAVEDHYLEDIVQQSGFRPS--------GNE--WR 952
Query: 465 TQRQLLPRKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICR 524
+ K+ Q + L + + +A +SL S + I + L+ AV+ ++
Sbjct: 953 GSAR--GGKQIEQEIGQLRAHLQAQGVDEETCKAVESL-SRSGGRISYELLGAVVRYVVE 1009
Query: 525 K------------ECPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTS 572
+ + GA+LVF G +I D + + + ++V +L H ++
Sbjct: 1010 RAENEELSGAADGDVGGAILVFCPGVGEIRQAIDAITTS--VRGQSKVEILPLHANLSAD 1067
Query: 573 EQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWI 632
EQ+ +F+ RKIV++TN+AE SITI D+ +VVD G+ KET ++ + L+ W
Sbjct: 1068 EQRRVFQPVGAGRRKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWA 1127
Query: 633 SQASARQRRGRAGRVQPGQCYHLYPRCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVG- 690
S+A+ +QRRGRAGRV+ G+C+ LY R V E A Q PE+ R PL SL L++KS++
Sbjct: 1128 SRAACKQRRGRAGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDE 1187
Query: 691 SIGEFLSAALQPPEPLAVQNAVDFLKRIGALDE----KENLTNLGKFLSMLPVDPKLGKM 746
+ E+L+ AL PP ++ A+ L GAL K LT+LGK L+ LP+D +L K+
Sbjct: 1188 DVKEYLNKALDPPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKL 1247
Query: 747 LVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKD-YSDHMALVRAYE 805
L+MG IF C P+LT+ S +S + F P EK+ A A++ F+A SD +A A+E
Sbjct: 1248 LIMGTIFGCLGPMLTVASIMSCKPLFNTPFEKREEASKARASFAAAGCRSDLLADAAAFE 1307
Query: 806 GWKD--AEREGSG--YEYCWRNFLSAQTLQAIHSLR-------KQFTFILRDA---GLLD 851
W+ A+R+ +G E+C +F+S +L+ I + R ++ F+ D G+ D
Sbjct: 1308 EWQTMRAQRKTNGEIREWCESHFISQSSLRDIQTNRLDLLSHLQEMGFVAPDYSAFGVYD 1367
Query: 852 EDGGNNKLSHNQSLVRAVICSGLFPGITSV--------------VHRET-SMSFKTMD-D 895
++ + H ++R+VI +GL+P + + V RE + K D +
Sbjct: 1368 DERYDMNAQH-AGVLRSVILAGLWPAVVRIDVPSAKFDQSSSGTVQREAEARQVKYFDRN 1426
Query: 896 GQVFLYAVSV 905
G+VFL+ S
Sbjct: 1427 GRVFLHPSST 1436
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 364 bits (934), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 240/717 (33%), Positives = 380/717 (52%), Gaps = 56/717 (7%)
Query: 188 SEESKPIDLAENVNMKENTDSFLDGSVMEKV--------------------LQRRSLQMR 227
S E + DLAE+ + E DS + +E +R +
Sbjct: 550 SAEKQNTDLAEDAKISEKLDSIIKSKELETPTSATTSKLMAPMDNIGKFSGFERPPETLL 609
Query: 228 NMQRAWQESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYIL 287
N R ES K FR LP+ +E ++ A+ +Q+++ISG+TGCGK+TQ+P ++L
Sbjct: 610 NKWRQQLESESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLL 669
Query: 288 ESEIESGRGAFCNIICTQPRRISAMAVSERVSAERG--EPLG---ETVGYKVRLEGMKGK 342
E+ ++G+ I T+PRRISA++++ RVS E G P E VGY VRL+
Sbjct: 670 ENSTKNGKAV--KIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTP 727
Query: 343 NTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLI 402
T L + T+G LR L + + VTH+ +DE+HER ++ D LLI + LL + L++I
Sbjct: 728 LTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKII 787
Query: 403 LMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQV-DDYGQEK 461
+MSATLNAE F YF G+ I IPG TYPV +LED+L G + N D +E
Sbjct: 788 IMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEED 847
Query: 462 LWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSRARDSLASWTAD-CIGFNLIEAVLC 520
++T +Q K+ A+VE L + +W + I + LI +L
Sbjct: 848 DYETDQQDASISNKSAEDAIVEMNL---------------IPAWYNEKAINYGLIVYLLK 892
Query: 521 HICRKECP---GAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFI 577
+I + P VLVF+ G +I ++ ++ P+ + + + H ++ +++Q+ +
Sbjct: 893 YIFTEGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSV 952
Query: 578 FEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASA 637
F P RKIVL+TN+AE +TI D+ V+D G +E Y++ + L +++S+A+A
Sbjct: 953 FNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANA 1012
Query: 638 RQRRGRAGRVQPGQCYHLYPRCVYEA-FAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFL 696
+QR GRAGRVQ G CYHL+ + ++ F YQ PE+LR L + L++K Q+G + + L
Sbjct: 1013 KQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVL 1072
Query: 697 SAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCF 756
AL PP + A++ L ++GAL E E LT LGKFLS LPVD LGK+LV+G ++C
Sbjct: 1073 GKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCV 1132
Query: 757 DPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDY-SDHMALVRAYEGWKDAEREGS 815
D +IV+ L++ PF + + A A+ F+ ++ SD + + AY W++
Sbjct: 1133 DAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPL 1192
Query: 816 GYE---YCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQSLVRAV 869
G + + +L+ + L SL+ Q L+D LL G + + +SL R++
Sbjct: 1193 GPDEDSFAKEKYLNLEALSMTESLKIQLLSELKDMKLL----GASDVDTCKSLKRSI 1245
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 238/693 (34%), Positives = 373/693 (53%), Gaps = 88/693 (12%)
Query: 219 LQRRSLQM-RNMQRAWQE---SPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGET 274
L RRS ++ + W E SP + R+ LP+++ + +++ AI +QV+VISGET
Sbjct: 543 LFRRSRELSEKLCNNWSERVKSPSYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGET 602
Query: 275 GCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKV 334
G GK+TQ+ Q+IL+ + SG ++CTQPRRISA++++ERV+ ER +G+ VGY V
Sbjct: 603 GSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSV 662
Query: 335 RLEGMKGKNTHLLFCTSGILLRRLLSDHNL---NGVTHVFVDEIHERGMNEDFLLIVLKD 391
E K T L FCT+G+LLRR+ H L + ++ V VDE+HER + D LL +LK
Sbjct: 663 HGEKSISKETLLEFCTTGLLLRRI-QQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKL 721
Query: 392 LLPRRRDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSL 451
++ R +L++ILMSAT+N++ F YFG A +HI G T+P++ +++ED L
Sbjct: 722 VISRIPNLKVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIEDFA-------PKL 774
Query: 452 NQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIG 511
N+ DD + +PR++K + I
Sbjct: 775 NEDDD----------EEDVPRRKKKEYE------------------------------ID 794
Query: 512 FNLIEAVLCHICRK--ECPGAVLVFMTGWEDIS-CLRDQLKSHPLLGDPNRVLLLTCHGS 568
++LI ++ I + G++LVF+ G +I+ C+R ++KS D ++ +L H S
Sbjct: 795 YHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIR-EIKSK----DGSKFEVLPLHAS 849
Query: 569 MPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLL 628
+ TSEQ+ F+ RKI+ ATN+AE SITI+D+V V+D G+ K+ YD +
Sbjct: 850 LNTSEQRRCFKTYTK--RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFK 907
Query: 629 PSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEAFAEYQL-PELLRTPLNSLCLQI--- 684
+W S+A+ +QRRGRAGRV+ G CY LY R E Q PE+LRT L+ +CL +
Sbjct: 908 ETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPL 967
Query: 685 --------KSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
S+ GSI +F+++ + PP V A+ L ++GAL E+LT LG++L
Sbjct: 968 VKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVS 1027
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSD 796
LP+D KLGK+LV G+IF +P LTI + LS + PFL E + + +S+ ++ + D
Sbjct: 1028 LPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPFLGDDEAREI----RSK-QSQGWGD 1082
Query: 797 HMALVRAYEGWKDA-EREG--SGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDED 853
+A R Y W + E G ++C L TLQ I R + + + L +
Sbjct: 1083 VLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTTKK 1142
Query: 854 GGNN---KLSHNQSLVRAVICSGLFPGITSVVH 883
N + N +++ +I + L P + V+
Sbjct: 1143 LTGNFDWYSTENLTVLSTLIAAALSPNVVKCVY 1175
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 369/663 (55%), Gaps = 48/663 (7%)
Query: 235 ESPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILES-EIES 293
+S E M R+ LP++K+++ ++ I +N+V++I+GETG GK+TQ+ Q+IL+ + E
Sbjct: 590 KSSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEK 649
Query: 294 GRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGI 353
G I+CTQPRRISA+ ++ERVS ER GE VGY +R +T + F T+G+
Sbjct: 650 GDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGV 709
Query: 354 LLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELF 413
L+R L + + T V +DE+HER ++ D ++ ++K+LL R R ++++LMSAT+N +LF
Sbjct: 710 LVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLF 769
Query: 414 SNYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRK 473
+F G T HI G T+P+ +FLED+L +K+
Sbjct: 770 KKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKI------------------------- 804
Query: 474 RKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRK----ECPG 529
++ + + +D++ + N ++ + R +T+ I ++L+ V+ ++ ++ G
Sbjct: 805 KREKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNG 864
Query: 530 AVLVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIV 589
+++VF+ G +I+ + L + D ++L H ++ +QK +F+K RK+V
Sbjct: 865 SIIVFLPGVGEINKCCNLLANKSNEAD---FMVLPLHSALTPEDQKRVFKKYHGK-RKVV 920
Query: 590 LATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQP 649
++TN+AE SITI+D V +D G+AK Y+ +NT L+ S+IS+A +QRRGRAGRV+
Sbjct: 921 VSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVRE 980
Query: 650 GQCYHLYPRCVYEA-FAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAV 708
G Y L+ + +YE +PE+ R PL SL L +K++ + + FLS AL P A+
Sbjct: 981 GLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPAL 1040
Query: 709 QNAVDFLKRIGALDEKE-NLTNLGKFLSMLPV-DPKLGKMLVMGAIFRCFDPVLTIVSGL 766
Q A L IG +DE + +LT LG+F+S++PV D K GK+L+ G +F C D + +VS L
Sbjct: 1041 QKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSIL 1100
Query: 767 SVRD-PFLLPQEKKNLAEIAKSRFSAK-DYSDHMALVRAYEGWKDAEREGSGYEYCWRNF 824
+ PF+ E + + ++ ++ D + +VR Y KD+ +Y N
Sbjct: 1101 GIGVLPFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYFKIKDS---SIKRKYLRDNL 1157
Query: 825 LSAQTLQAIHSLRKQFTFILRDAGLLDED---GGNNKLSHNQ---SLVRAVICSGLFPGI 878
LS + I S Q+ IL+D G L D G + L+ N+ ++RA++ +P I
Sbjct: 1158 LSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILTGAFYPHI 1217
Query: 879 TSV 881
V
Sbjct: 1218 ARV 1220
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 335 bits (859), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 349/678 (51%), Gaps = 90/678 (13%)
Query: 236 SPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGR 295
+P+ +L R+ LP +++ L+ NQ++V GETG GKTTQ+PQ++L E+
Sbjct: 80 TPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE 139
Query: 296 GAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILL 355
+ CTQPRR++AM+V++RV+ E LGE VGY +R E T L + T G+LL
Sbjct: 140 N--TQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLL 197
Query: 356 RRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSN 415
R + DH+L+ + + +DE HER + D L+ +LK ++ RR DL++I+MSATL+AE F
Sbjct: 198 REAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQR 257
Query: 416 YFGGAPTIHIPGFTYPVQAH----FLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLP 471
YF AP + +PG TYPV+ + F D L+ + ++ ++ G L+ T
Sbjct: 258 YFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGED--- 314
Query: 472 RKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAV 531
+EDA+ K + E + R+E G +
Sbjct: 315 ---------EIEDAVRKISLEG--------------------------DQLVREEGCGPL 339
Query: 532 LVFMTGWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNI-----R 586
V+ PL +GS+P +Q+ IFE AP + R
Sbjct: 340 SVY-----------------PL------------YGSLPPHQQQRIFEPAPESHNGRPGR 370
Query: 587 KIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGR 646
K+V++TN+AE S+TI+ IV+VVD G +K+ Y+ LL S IS+ASA+QR GRAGR
Sbjct: 371 KVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGR 430
Query: 647 VQPGQCYHLYPRCVYEA-FAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEP 705
+PG+C+ LY ++ E PE+LR+ L+S L++K L + + F + PP P
Sbjct: 431 TRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAP 488
Query: 706 LAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSG 765
+ A++ L + LD++ NLT LG+ S P+DP L ML+ F+C +LTIV+
Sbjct: 489 ETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAM 548
Query: 766 LSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSG-YEYCWRNF 824
LSV + F+ P + K A+ AK+ F+ D DH+ L+ Y +K E G +++C ++
Sbjct: 549 LSVPNVFIRPTKDKKRADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHY 607
Query: 825 LSAQTLQAIHSLRKQFTFILR--DAGLLDEDGGNNKLSHNQSLVRAVICSGLFPGITSVV 882
L+ ++L A ++R Q ++ + L D + K N +R + SG F +
Sbjct: 608 LNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDN---IRKALASGFFMQVAK-- 662
Query: 883 HRETSMSFKTMDDGQVFL 900
R + + T+ D Q L
Sbjct: 663 KRSGAKGYITVKDNQDVL 680
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2
PE=2 SV=1
Length = 1445
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/416 (40%), Positives = 254/416 (61%), Gaps = 15/416 (3%)
Query: 481 LVEDALHKSNFENYSSRARDSLA----SWTADCIGFNLIEAVLCHICRKECPGAVLVFMT 536
L E +L ++N + S+ R+ L S+ + + +LI +L +IC GA+L+F+
Sbjct: 586 LDESSLVQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLP 645
Query: 537 GWEDISCLRDQL--KSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNM 594
G+++I LRD++ + +R + H +M TS+QK + + P +RKI+L+TN+
Sbjct: 646 GYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNI 705
Query: 595 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYH 654
AE SIT+ND+VFV+D GK KE ++DALN L WIS+ASA QR+GRAGR +PG C+
Sbjct: 706 AETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR 765
Query: 655 LYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQV--GSIGEFLSAALQPPEPLAVQNAV 712
L+ R ++ E+Q PELLR PL LCL K L +I +FL A +PP L V+NAV
Sbjct: 766 LFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAV 825
Query: 713 DFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPF 772
LK I A+D E+LT LG L+ LPV+P LGKM++ + +C DP+LTI L+ RDPF
Sbjct: 826 QMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPF 885
Query: 773 LLPQE--KKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLSAQTL 830
+LP + +K A + + RF+A +SDHMAL+RA++ W+ A +G +C +NFLS T+
Sbjct: 886 VLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATM 945
Query: 831 QAIHSLRKQFTFILRDAGLLDEDGGN-----NKLSHNQSLVRAVICSGLFPGITSV 881
+ I +R Q LR +G + GG N S N ++V+A + +G++P + V
Sbjct: 946 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV 1001
Score = 213 bits (541), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 164/256 (64%), Gaps = 15/256 (5%)
Query: 245 FRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICT 304
FR+SLP F+++E +++ I N+V++I GETG GKTTQ+PQ++L+ ++G C I CT
Sbjct: 204 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNG--IPCRIFCT 261
Query: 305 QPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLS-DHN 363
QPRR++A+AV+ERV+AER E +G+T+GY++RLE T L FCT+G+LLR L++ D
Sbjct: 262 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 321
Query: 364 LNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTI 423
L+ VTHV VDE+HER DFLL L+DLL + L+LIL SA L+ LF YFG P I
Sbjct: 322 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 381
Query: 424 HIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVE 483
+I G + V+ FLED+L TGY + ++ Y +EK R+ K Q T
Sbjct: 382 YIQGRPFEVKEMFLEDILRTTGY---TNKEMLKYKKEK---------QREEKQQTTLTEW 429
Query: 484 DALHKSNFENYSSRAR 499
+ ++ F+ S R R
Sbjct: 430 YSAQENTFKPESQRQR 445
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens
GN=YTHDC2 PE=1 SV=2
Length = 1430
Score = 318 bits (816), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 253/416 (60%), Gaps = 15/416 (3%)
Query: 481 LVEDALHKSNFENYSSRARDSLA----SWTADCIGFNLIEAVLCHICRKECPGAVLVFMT 536
L E +L ++N + S+ R+ L S+ + + +LI +L +IC GAVL+F+
Sbjct: 571 LDESSLVQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLP 630
Query: 537 GWEDISCLRDQL--KSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNM 594
G+++I LRD++ +R + H +M TS+QK + + P +RKI+L+TN+
Sbjct: 631 GYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNI 690
Query: 595 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYH 654
AE SIT+ND+VFV+D GK KE ++DALN L WIS+ASA QR+GRAGR +PG C+
Sbjct: 691 AETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR 750
Query: 655 LYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGS--IGEFLSAALQPPEPLAVQNAV 712
L+ R ++ E+Q PELLR PL LCL K L + I +FL A +PP L V+NAV
Sbjct: 751 LFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAV 810
Query: 713 DFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPF 772
LK I A+D E+LT LG L+ LPV+P LGKM++ + +C DP+LTI L+ RDPF
Sbjct: 811 QMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPF 870
Query: 773 LLPQE--KKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLSAQTL 830
+LP + +K A + + RF+A +SDHMAL+RA++ W+ A +G +C +NFLS T+
Sbjct: 871 VLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATM 930
Query: 831 QAIHSLRKQFTFILRDAGLLDEDGGN-----NKLSHNQSLVRAVICSGLFPGITSV 881
+ I +R Q LR +G + GG N S N ++V+A + +G++P + V
Sbjct: 931 EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHV 986
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 144/203 (70%), Gaps = 3/203 (1%)
Query: 245 FRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICT 304
FR+SLP F+++E +++ I N+V++I GETG GKTTQ+PQ++L+ ++G C I CT
Sbjct: 189 FRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNG--IPCRIFCT 246
Query: 305 QPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLS-DHN 363
QPRR++A+AV+ERV+AER E +G+T+GY++RLE T L FCT+G+LLR L++ D
Sbjct: 247 QPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDST 306
Query: 364 LNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTI 423
L+ VTHV VDE+HER DFLL L+DLL + L+LIL SA L+ LF YFG P I
Sbjct: 307 LSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVI 366
Query: 424 HIPGFTYPVQAHFLEDVLEMTGY 446
+I G + V+ FLED+L TGY
Sbjct: 367 YIQGRPFEVKEMFLEDILRTTGY 389
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 316 bits (809), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 210/653 (32%), Positives = 344/653 (52%), Gaps = 77/653 (11%)
Query: 253 KEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAM 312
+ K+ +L+AI N V+V+ G TGCGKTTQ+PQY+LE R +CNI+ TQPR+I+A
Sbjct: 125 QSKQDILKAIRENPVVVLQGMTGCGKTTQVPQYLLEDAY--NRKEWCNIVVTQPRKIAAS 182
Query: 313 AVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVTHVFV 372
+++ RV+ ER LG VG+KV L+ M ++T L + T+G+LL +L++ +++ TH+ +
Sbjct: 183 SIARRVAEERNCALGSLVGFKVGLKEMVSEDTRLTYVTTGVLLNKLITSKSISSYTHIIL 242
Query: 373 DEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFG-------GAPTIHI 425
DE+HER ++ DFLLI+++ LL R+ ++ILMSAT+ + F+ YF AP + +
Sbjct: 243 DEVHEREVDMDFLLIIVRRLLATMRNTKIILMSATIESSEFAQYFKIPGPNSLFAPQLAV 302
Query: 426 PGFT-YPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVED 484
T + V ++LED+ ++ Q D + EK++ L K A+V D
Sbjct: 303 SNVTQHDVSVYYLEDLEKLRVDFTIKYEQPDVH--EKMY-----FLAAK-----VAVVCD 350
Query: 485 ALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCL 544
R D S A I + ++++F+ G +I +
Sbjct: 351 ------------RFIDEFES--ASTIDYK---------------PSIIMFLPGINEIERM 381
Query: 545 RDQLKSHPLLGDPN-------RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEA 597
+ L++ LGD N + +L H +P+ EQ +F K P RK++L+TN+AE+
Sbjct: 382 AEVLRN--FLGDSNVNSQEQTKFTILKLHSMLPSEEQALVFTKPSPGYRKVILSTNIAES 439
Query: 598 SITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYP 657
SITI D+ FV+D + D LNN L W S+ + QR GR GRV G+ Y L
Sbjct: 440 SITIPDVKFVIDFCLHRVLVADTLNNFTTLRTQWASRNNCIQRAGRCGRVMNGRVYRLVN 499
Query: 658 RCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLK 716
+ +E A+ PE++R PL+++ L+ K L +G L+ A+ PP V N V LK
Sbjct: 500 KHFFEHGMAQSIEPEMVRCPLSNVVLKTKLLDMGPPHTILALAMSPPNLSDVSNTVLQLK 559
Query: 717 RIGAL--------DEKE-NLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLS 767
+GAL D ++ ++T LG +S LP+D L K++V+G +F + + I +G++
Sbjct: 560 ELGALLRTAKGVYDLQDGDITYLGNIMSTLPLDIHLAKLVVLGYVFSVLEEAIVIAAGMN 619
Query: 768 VRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSG---YEYCWRNF 824
V++ F Q + A K F+ SD +A++ AY W+ +G+G ++C R
Sbjct: 620 VKNIFC--QLRTIEALRVKRHFANGSASDGIAILNAYNWWRSIREQGTGGDTTDWCNRYM 677
Query: 825 LSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNK--LSHNQSLVRAVICSGLF 875
L ++L + L ++ T L+ A + G NN +++V V+ +G F
Sbjct: 678 LDRKSLIEMAELVQEITMRLKTANIRVVSGANNARWTDRERTVVLKVVMAGAF 730
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 313 bits (803), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 225/675 (33%), Positives = 334/675 (49%), Gaps = 96/675 (14%)
Query: 236 SPEGNKMLDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGR 295
+P + + ++ LP F+ + +LL I NQV+VI GETG GKTTQL QY+ E + R
Sbjct: 337 TPSKDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDR 396
Query: 296 GAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKN-THLLFCTSGIL 354
G +I+ TQPRR++A++V++RV+ E PLG+ VGY +R E + T L F T GIL
Sbjct: 397 GK--SIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGIL 454
Query: 355 LRRLLSDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFS 414
LR L D L+ + V +DE HER +N D LL K LL RRRDL+LI+ SAT+NA+ FS
Sbjct: 455 LRETLLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFS 514
Query: 415 NYFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKR 474
+FG AP IPG T+PVQ + + N V DY
Sbjct: 515 AFFGNAPQFTIPGRTFPVQTIY-------------TSNPVQDY----------------- 544
Query: 475 KNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVF 534
VE A+ ++ V H+ G +L+F
Sbjct: 545 -------VEAAVSQA----------------------------VKIHLANDCSSGDILIF 569
Query: 535 MTGWEDISCLRDQLKSHPL-----------LGDPNRVLLLTCHGSMPTSEQKFIFEKAPP 583
MTG EDI D L+ L + N + +L + ++P Q IF+
Sbjct: 570 MTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHG 629
Query: 584 NIRKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGR 643
RKI++ATN+AE S+TI I +V+DCG +K Y+ L+ + IS+A+A QR GR
Sbjct: 630 TKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGR 689
Query: 644 AGRVQPGQCYHLYPRCVYEAFAEYQ-LPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQP 702
AGR PG Y LY ++ Q +PE+ RT L++ L +KSL V +P
Sbjct: 690 AGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKP 749
Query: 703 PEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTI 762
P + + + L IGA+D LT LG ++ P+ P L K+L++ C D +LTI
Sbjct: 750 PLQTFLSSLYE-LWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTI 808
Query: 763 VSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWR 822
VS LSV F P+E++ A+IA+++F SDH+ L+ +E W+ +C +
Sbjct: 809 VSMLSVPQVFYRPKERQKEADIARNKFFIAK-SDHLTLLNVFEQWR---ANNFSSHWCNK 864
Query: 823 NFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQSLVRAVICSGL------FP 876
+F+ ++L +R Q IL+ + G + +++ ICSG
Sbjct: 865 HFVQYKSLVRARDIRDQLLTILKSQKIPVISSGK-----DWDIIKKCICSGFAHQAAKIT 919
Query: 877 GITSVVHRETSMSFK 891
G+ + VH +T +S +
Sbjct: 920 GLRNYVHLKTGVSVQ 934
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 203/658 (30%), Positives = 339/658 (51%), Gaps = 64/658 (9%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ +SLP + ++E++++AI N V+++ GETGCGKTTQ+PQYIL+ + + FCNI+
Sbjct: 111 LNRNRSLPIYAQREQIMKAIKENPVVILKGETGCGKTTQVPQYILDEAFK--KREFCNIV 168
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGK-NTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER G Y+V L +T LL+CT+G+LL L+
Sbjct: 169 VTQPRRIAAISIANRVCQERRWQPGTVCSYQVGLHKQSNSADTRLLYCTTGVLLNNLIRL 228
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+H+R + DFLLIV++ LL R +++ILMSAT++ F YF
Sbjct: 229 KTLTHYTHIVLDEVHDRDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFCKYFASC 288
Query: 421 ----PTIHIP-GFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRK 475
P + G YP+ ++ + +L ++N WKT+ P++R+
Sbjct: 289 KSMPPVVAASHGRKYPLVKYYRD--------QLKNIN----------WKTE----PQQRE 326
Query: 476 NQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFM 535
IT E Y + L + E R G+VL+F+
Sbjct: 327 PGIT-----------HEGYRDAVKILLVIDNMERKAEGQSEQSYEEAKRT---GSVLIFL 372
Query: 536 TGWEDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNM 594
G +I + + ++ H + PN ++ ++ CH M + Q+ +F+ RK++L TN+
Sbjct: 373 PGVNEIDTMAEHIE-HVMNESPNIKITIVRCHSLMSSDSQEDVFQPPLSGHRKVILTTNI 431
Query: 595 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYH 654
AE+SIT+ D+ +V+D AK D +N CL W S+ + RQR GR GR + G+ Y
Sbjct: 432 AESSITVTDVSYVIDFCLAKVMHIDTASNFSCLCLEWASKVNCRQRAGRVGRTRSGRVYR 491
Query: 655 LYPRCVY-EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVD 713
+ + Y E E+ +PE+LR+PL S L+ K L +G E L+ A+ PP + N V
Sbjct: 492 MVTKAFYMEEMQEFGIPEMLRSPLQSSVLKAKELDMGGPSEILALAMSPPNLTDIHNTVL 551
Query: 714 FLKRIGAL---------DEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVS 764
LK +GAL +LT G +S P+D +L +++++G IF C D + I +
Sbjct: 552 LLKEVGALYTTVDGVYEQLDGDLTYWGTIMSRFPLDVRLSRLIILGYIFNCLDEAIIIAA 611
Query: 765 GLSVRDPFLLPQEKKNL-AEIAKSRFSAKDYSDHMALVRAYEGW----KDAEREGSGYEY 819
G+SVR +L Q ++ A F+ SD + R Y+ + ++ + S ++
Sbjct: 612 GMSVRSLYLSGQRQRTSDAFWMHYIFADGSGSDLVGFWRVYKIYVNMCQNLPMKDSEVQW 671
Query: 820 CWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHN--QSLVRAVICSGLF 875
R +S ++L+ ++ L ++ L+ G + + H+ +S++ VI +G F
Sbjct: 672 ARRYNVSLRSLKEMYLLVQELQKRCAALNLVSLPVGASHMWHDREKSIILKVIIAGAF 729
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 340/660 (51%), Gaps = 68/660 (10%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+LP + ++E++++AI N V+++ GETGCGKTTQ+PQYIL+ + R FCNI+
Sbjct: 111 LNRNKNLPIYAQREQIMKAIRENPVVILKGETGCGKTTQVPQYILDEACK--RREFCNIV 168
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER G Y+V L ++T LL+CT+G+LL L+
Sbjct: 169 VTQPRRIAAISIANRVCQERQWQPGTVCSYQVGLHRQSNVEDTRLLYCTTGVLLNNLIRL 228
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER + DFLLIV++ LL R +++ILMSAT++ FS YF +
Sbjct: 229 KTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFSKYFATS 288
Query: 421 ----PTIHIP-GFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRK 475
P + G YP+ ++ D L+ +K + G E + LL
Sbjct: 289 SAFPPVVTASHGRKYPLVKYY-RDQLKNIHWKDEPQERAPGIGPEGYADAIKILL----- 342
Query: 476 NQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFM 535
I + A+ +S ++Y R G+VL+F+
Sbjct: 343 -VIDNMERKAVGQS-LQSYEEAKR----------------------------TGSVLIFL 372
Query: 536 TGWEDISCLRDQLKSHPLLGDPNRVLLLT---CHGSMPTSEQKFIFEKAPPNIRKIVLAT 592
G +I + D + S + + N +++T CH M Q+ +F+ P RKI+L T
Sbjct: 373 PGINEIDTMADHITS---VMEENPTMIITIVRCHSLMSPDSQEEVFQPPLPGHRKIILTT 429
Query: 593 NMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQC 652
N+AE+SIT+ D+ +V+D K D N CL W S+ + RQR GR GR++ G+
Sbjct: 430 NIAESSITVPDVSYVIDFCLTKVLHTDTATNYSCLRLEWASKVNCRQRAGRVGRLRSGRV 489
Query: 653 YHLYPRCVY-EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNA 711
Y + + Y E E+ +PE+LR+PL + L+ K L++G E L+ A+ PP +QN
Sbjct: 490 YRMVSKAFYLEEMKEFGIPEMLRSPLQNSVLKAKELEMGRPSEILALAMSPPNLSDIQNT 549
Query: 712 VDFLKRIGAL---------DEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTI 762
V LK +GAL + +LT G +S P+D +L +++++G +F C + V+ I
Sbjct: 550 VLLLKEVGALYTTVDGVYEELDGDLTYWGTIMSRFPLDVRLSRLIILGYVFNCLEEVIVI 609
Query: 763 VSGLSVRDPFLLPQEKK-NLAEIAKSRFSAKDYSDHMALVRAYEGW----KDAEREGSGY 817
+G++VR +L + ++ N A F+ SD +A+ R Y + +D + S
Sbjct: 610 AAGMTVRSLYLTGKRRQVNDAFWMHYIFADGSGSDMVAIWRVYRIYLNMCQDRMLKESAE 669
Query: 818 EYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKL--SHNQSLVRAVICSGLF 875
++ R ++ ++L+ +H + ++ L G ++ +S++ VI +G F
Sbjct: 670 QWARRFNVNLRSLKEMHLMVQELRQRCASVNLQPLPYGTCQMWDDREKSIILKVIIAGAF 729
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 305 bits (782), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 199/635 (31%), Positives = 336/635 (52%), Gaps = 76/635 (11%)
Query: 246 RKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIES-GRGAFCNIICT 304
R LP FK + +L R + I+I GETGCGK+TQ+PQ++LE+ + GR I+ T
Sbjct: 74 RIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGR----QIVIT 129
Query: 305 QPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNL 364
QPRR++ + ++ RV+ E+ LG VGY VR + + K+T + F T G+LLR +L+D L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 365 NGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIH 424
+ + + +DE HER N D LL +L+ ++ R DLR+I+ SATL+
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLD--------------- 234
Query: 425 IPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVED 484
A +D EM N+ + ++ T + R + +
Sbjct: 235 ---------AELFKDFFEM--------NETGNSDKD----TAGIISVEGRTHPV------ 267
Query: 485 ALH--KSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDIS 542
A+H K++ +Y A D++ + I + E PG +LVF+TG +++
Sbjct: 268 AVHHTKTSVPDYCQSAVDTVIN-----------------IHKHENPGDILVFLTGQDEVE 310
Query: 543 CLRDQLKS-HPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITI 601
+ ++L+ L + +R+ ++ C+G++P EQ F+ P RK+V+ATN+AEASITI
Sbjct: 311 DVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITI 370
Query: 602 NDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVY 661
I +V+D G K A N L+ +S+ASA QR GRAGR++PG+CY LYP +
Sbjct: 371 PGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF 430
Query: 662 EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGAL 721
E FAE +PE+ R + S LQ+K+L V ++ F L PP A+ N ++ L +GA+
Sbjct: 431 ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF--HYLSPPPSWAMINGLELLYALGAI 488
Query: 722 DEKENLTN-LGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKN 780
DE LT+ LG ++ P+ P K L+ A F C ++TIV+ + ++D F+ P +++
Sbjct: 489 DETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRH 548
Query: 781 LAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLSAQTLQAIHSLRKQF 840
A++ + +F+ ++ DHM ++ + + + G ++C +F++ + L ++R Q
Sbjct: 549 QADVIRKKFAVEE-GDHMTMLNVFTKFVE---NGRSKKWCSDHFVNYRGLMRADNVRSQL 604
Query: 841 TFILRDAGLLDEDGGNNKLSHNQSLVRAVICSGLF 875
+L+ + E + L + +R + +G F
Sbjct: 605 VRLLKRFEI--EKVSSRGLINCSENIRQCLVTGFF 637
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 215/662 (32%), Positives = 333/662 (50%), Gaps = 69/662 (10%)
Query: 249 LPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 308
LP K ++ L+ I N V++I G TG GKTTQLPQ+IL+ E R CN++ TQPR+
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAE--RNIPCNLVVTQPRK 146
Query: 309 ISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVT 368
I A +++ V+ ER LG VGY+V LE M ++T L++ T+G+LL++L+S L +
Sbjct: 147 IGATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYS 206
Query: 369 HVFVDEIHERGMNEDFLLIVLKDLL-PRRRDLRLILMSATLNAELFSNYFGG-------- 419
H+F+DE+HER DFLL+V++ LL R +++ILMSAT+N F+ YFG
Sbjct: 207 HIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNP 266
Query: 420 APTIHIPGFTYPVQAHFLEDVLEM--TGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQ 477
A + G Y V+ ++L+++ M G L D Y E+++ N
Sbjct: 267 AYVFEVEGAPYAVEEYYLDELKTMLPVGVNLDLTLPQDPYITEEMY------------NV 314
Query: 478 ITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTG 537
+L++ E R + S T H R G+VLVF+ G
Sbjct: 315 AVSLIQSF---DEMEAKDHRRSEQTGSTT--------------HPER----GSVLVFLPG 353
Query: 538 WEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEA 597
+I +++ L L+ R+ + H ++ EQ +F P RKI+L+TN+AE+
Sbjct: 354 LAEIQYMKEALSK--LVR--KRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILSTNIAES 409
Query: 598 SITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYP 657
S+T+ D+ +V+D ++ D N CL +W S+ S QRRGRAGRV G CY L
Sbjct: 410 SVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCYRLVT 469
Query: 658 RCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLK 716
R +E + +PE+LR+PL S L++K L +G LS AL PP ++ V LK
Sbjct: 470 RHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGDIERTVLQLK 529
Query: 717 RIGALDEKEN--------LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSV 768
+IGAL + N LT LG+ L+ LPVD +LGK++V+G +F C + L I + LS+
Sbjct: 530 QIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSL 589
Query: 769 RDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGS----------GYE 818
+ F +P ++ +K F+ SD +A V A++ W + +G G E
Sbjct: 590 KSFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKGELRHPKDELEWGKE 649
Query: 819 YCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQSLVRAVICSGLFPGI 878
C + + + L+K+ + L + +++ VI LFP
Sbjct: 650 NCIQIKRIREVAELFEDLKKRVSRFNMHISSSSNPTDYTSLHKQRFILQVVIAGALFPNY 709
Query: 879 TS 880
S
Sbjct: 710 FS 711
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/639 (30%), Positives = 323/639 (50%), Gaps = 92/639 (14%)
Query: 219 LQRRSLQMRNMQRAWQESPEGNKMLDFR----------KSLPSFKEKERLLQAIARNQVI 268
++ +SL + ++ SPE +F KSLP + ++E ++ AI N V+
Sbjct: 76 MRNKSLDDMDSDEEYEASPEIRTDAEFYEKYYFNLNRDKSLPIYAKREEIINAINENPVV 135
Query: 269 VISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGE 328
++ GETGCGKTTQ+PQYIL+ +S + +CNI+ TQPRRI+A++++ RV ER G
Sbjct: 136 IVKGETGCGKTTQVPQYILDEGFKSKQ--YCNIVVTQPRRIAAISIANRVCQERQWQRGT 193
Query: 329 TVGYKVRLEGM--KGKNTHLLFCTSGILLRRLLSDHNLNGVTHVFVDEIHERGMNEDFLL 386
GY+V L + +T LL+CT+G+LL L+++ L TH+ +DE+HERG DFLL
Sbjct: 194 VCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNKTLTHYTHIVLDEVHERGQEMDFLL 253
Query: 387 IVLKDLLP-RRRDLRLILMSATLNAELFSNYFG----GAPTIHIP-GFTYPVQAHFLEDV 440
IV++ LL R +++ILMSAT+N S+YF P I G + V+ ++ D
Sbjct: 254 IVIRRLLATNSRHVKVILMSATINPRELSDYFANERSAPPVIDASYGRNFTVEKYY-RDQ 312
Query: 441 LEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALHK---SNFENYSSR 497
L+ ++ G ++ + R T LV D + + S ++Y+
Sbjct: 313 LQTINWE----------GHQEDINSPGITQEGYRSAIKTILVIDNMERNERSTGKSYNQS 362
Query: 498 ARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCLRDQLKSHPLLGDP 557
R+ G++L+F+ G +I+ + D LK
Sbjct: 363 LRE----------------------------GSILIFLPGVGEINNMSDMLKDMANHDSI 394
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
+ ++ CH M + +Q+ IF+ +PP RKI++ATN+AE+SIT+ D+ +++D K
Sbjct: 395 MKFNMVRCHSLMSSDDQREIFQPSPPGYRKIIMATNVAESSITVPDVSYIIDFCLEKVLF 454
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYE-AFAEYQLPELLRTP 676
D N L W S+ + RQR GR GR++ G+ Y + + Y+ +EY +PE+LR+P
Sbjct: 455 TDTFTNFSSLRLVWASKTNCRQRAGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEMLRSP 514
Query: 677 LNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEK---------ENL 727
L + L+ K L++G+ E L+ AL PP + N + LK +GAL ++
Sbjct: 515 LQNCVLKAKELKMGTPVEMLALALSPPNLSDICNTILLLKEVGALFPTVDGTYDPCDGDI 574
Query: 728 TNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPFLLPQEKKNLAEIAKS 787
T G +S LP+D +L +++++G IF D + I +GL+VR F + +
Sbjct: 575 TYWGTIMSKLPLDTRLSRLIILGYIFNLLDEAIIIAAGLTVRGIF-----------VDST 623
Query: 788 RFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLS 826
R + +Y H A+ GS WR +L+
Sbjct: 624 RLGSDNYWMHYVF---------ADGSGSDLVGIWRVYLT 653
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 340/663 (51%), Gaps = 82/663 (12%)
Query: 246 RKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQ 305
+ LP K +L I N V+V+ G TGCGKTTQ+PQY+LE E R +CNII TQ
Sbjct: 55 KNDLPINWNKPEILDKIRSNAVVVLQGATGCGKTTQVPQYLLEEAFE--RKEYCNIIVTQ 112
Query: 306 PRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLN 365
PR+I+A++++ RV+ ER LG VGYKV L+ ++T LL+ T+G+LL+ L++ +
Sbjct: 113 PRKIAAISIARRVAQERKCDLGTLVGYKVGLKEQHNEDTRLLYVTTGVLLQSLINSKTMA 172
Query: 366 GVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFG------ 418
THV +DE+HER ++ DFLLIV++ LL + ++ILMSAT++A+ FS YF
Sbjct: 173 TYTHVILDEVHEREVDMDFLLIVVRRLLSTNSKKTKVILMSATIDAKGFSEYFKIPKKSG 232
Query: 419 --GAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYG---QEKLWKTQRQLLPRK 473
AP I + V F D LE KL Q+D E+++ +L+
Sbjct: 233 YLSAPVISVERPRLHVVQEFYFDDLE----KLKVDFQIDYEAPGISEQMYNIAAKLV--- 285
Query: 474 RKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLV 533
+V D L F DSL E ++++
Sbjct: 286 -------VVCDHLKGQEFG-------DSL-----------------------EYKPSIII 308
Query: 534 FMTGWEDISCLRDQLKS-----HPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKI 588
F+ G +I + L+ PN +L++ H ++P +Q +F K PN RK+
Sbjct: 309 FLPGINEIEKMEGALEKLIASIQNAAQRPN-LLIMKLHSTLPADDQTAVFRKPGPNQRKV 367
Query: 589 VLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQ 648
+L+TN+AE+SIT+ DI FV+D + D L N L W S+++ QR GRAGR+
Sbjct: 368 ILSTNIAESSITVPDIKFVIDFCLQRILVTDTLTNFSTLRTEWASKSNCIQRAGRAGRLM 427
Query: 649 PGQCYHLYPRCVYEAFAEYQL-PELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLA 707
G+ Y L R +E + PE+LR PL ++ L+ K L++G+ L+ A+ PP
Sbjct: 428 SGRVYRLVDRRFFENNMDVSTSPEILRCPLETVVLKAKLLEMGTPPSILALAMAPPNLDD 487
Query: 708 VQNAVDFLKRIGAL--------DEKE-NLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDP 758
++N + LK +GA+ D+ + +LT LG+ +S LP+D ++ K++++G IF +
Sbjct: 488 IRNTILLLKEVGAMLRTVKGNYDQLDGDLTYLGRIMSKLPLDIRISKLIMLGYIFSVMEE 547
Query: 759 VLTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSG-- 816
+TI +G++V++ FL K ++ K ++ SD +A++ AY WK + +
Sbjct: 548 AVTIGAGMNVKNIFLNQNSVKTYSQ--KMYWADGSGSDAIAILNAYTAWKSRQEQAGDTA 605
Query: 817 --YEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKL--SHNQSLVRAVICS 872
Y + R L ++L + L + L +GL G N + + ++++ VI +
Sbjct: 606 DMYNWARRMSLDRKSLIDMAELIHEVKDRLNRSGLKPVSGPNRVVWNAREKTVILKVILA 665
Query: 873 GLF 875
G F
Sbjct: 666 GAF 668
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 302 bits (774), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 200/603 (33%), Positives = 301/603 (49%), Gaps = 88/603 (14%)
Query: 246 RKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQ 305
RKSLP ++ K+ LL+AI QV++I ETG GKTTQLPQ++ E+ G C CTQ
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKIC---CTQ 471
Query: 306 PRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLN 365
PRR++AM+V+ RV+ E LG+ VGY +R E + T + + T G+LLR L++ +L
Sbjct: 472 PRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLA 531
Query: 366 GVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNAELFSNYFGGAPTIHI 425
+ + +DE HER ++ D L ++KD+ R DL++++ SAT++AE FS YF AP ++
Sbjct: 532 SYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYV 591
Query: 426 PGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDA 485
PG YPV ++ P+ N I A +
Sbjct: 592 PGRRYPVDIYY---------------------------------TPQPEANYIQAAITTI 618
Query: 486 LHKSNFENYSSRARDSLASWTA----DCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDI 541
L + + A D L T + + N+ E LC I K P +L
Sbjct: 619 LQI----HTTQPAGDILVFLTGQDEIELMSENMQE--LCRILGKRIPEIIL--------- 663
Query: 542 SCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITI 601
C P+ + +P+ Q IF+ PP RK+VLATN+AE SITI
Sbjct: 664 -C--------PIYAN------------LPSELQAKIFDPTPPGARKVVLATNIAETSITI 702
Query: 602 NDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVY 661
+ + FV+D G K+ Y+ L+ S+ASA QR GRAGRV PG+C+ LY R Y
Sbjct: 703 DGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTY 762
Query: 662 -EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGA 720
PE+ RT L ++ L +KSL + ++ +F PPE L +++ L +GA
Sbjct: 763 NNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETL--MRSLELLYALGA 820
Query: 721 LDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGL-SVRDPFLLPQEKK 779
L+ + LT LG+ ++ P DP L K L+ + + C + VL+IVS L F P++K
Sbjct: 821 LNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKI 880
Query: 780 NLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCW--RNFLSAQTLQAIHSLR 837
A+ A++ F+ DH+ L+ + W D + + Y W NFL ++L +R
Sbjct: 881 MEADKARANFTQPG-GDHLTLLHIWNEWVDTD-----FSYNWARENFLQYKSLCRARDVR 934
Query: 838 KQF 840
Q
Sbjct: 935 DQL 937
>sp|B3P3W1|SPNE_DROER Probable ATP-dependent RNA helicase spindle-E OS=Drosophila erecta
GN=spn-E PE=3 SV=1
Length = 1432
Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 209/656 (31%), Positives = 350/656 (53%), Gaps = 58/656 (8%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+LP + ++E +L AI + V+++ G+TGCGKTTQ+PQYIL+ +SG+ +CNI+
Sbjct: 108 LNRDKNLPIYAKREEILAAINAHPVVILKGQTGCGKTTQVPQYILDEGYKSGK--YCNIV 165
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER Y+V L ++T LL+CT+G+LL L++
Sbjct: 166 VTQPRRIAAISIANRVCQEREWQQDTVCSYQVGLHRPTSLEDTRLLYCTTGVLLNNLINK 225
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER + DFLLIV++ LL R +++ILMSAT++A ++YF
Sbjct: 226 KTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKIILMSATIDARELADYFTTT 285
Query: 421 PTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQR--QLLPRKRKNQI 478
++ P T +H + +E Y+ D G + WK + QL+P+ +
Sbjct: 286 NSVP-PVIT---ASHGRKHAIE-KFYR-------DQMGSIR-WKEEEDDQLVPQINDHGY 332
Query: 479 TALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGW 538
A V+ + N E + A S S+ EA+ GAVL+F+ G
Sbjct: 333 RAAVKIIMVIDNMEREA--AIQSRLSYD---------EALRY--------GAVLIFLPGI 373
Query: 539 EDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEA 597
++I + + + S L D N +V ++ C M Q+ +F PP RKI+L TN+AE+
Sbjct: 374 DEIDTMAENITSM-LQSDRNIKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILTTNIAES 432
Query: 598 SITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYP 657
SIT+ D+ +V+D K D + L +W S+A+ RQR GR GR++ G+ Y +
Sbjct: 433 SITVPDVSYVIDFCLTKVLVTDTATSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVN 492
Query: 658 RCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLK 716
+ Y+ AE+ +PE+LR PL + L+ K L++GS E L+ AL PP +QN + LK
Sbjct: 493 KSFYQREMAEFGIPEMLRMPLQNSVLRAKELEMGSPIEILALALSPPNLSDIQNTILLLK 552
Query: 717 RIGAL----DEKEN-----LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLS 767
+GAL D N +T G +S LP+D +L +++++G +F + + I +GLS
Sbjct: 553 EVGALFLTVDGVYNAMDGDITYWGTIMSRLPLDTRLSRLIILGYVFNLLEEAIIIAAGLS 612
Query: 768 VRDPFLLPQEKKNLAE--IAKSRFSAKDYSDHMALVRAYEGWKD----AEREGSGYEYCW 821
+R ++ + A+ F+ SD +A+ R Y + + A + S +
Sbjct: 613 MRGLYVNEGRRTQGADSFWMHYIFADGSGSDLVAIWRVYLTYLNMVEIAHEQESAIRWAK 672
Query: 822 RNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKL--SHNQSLVRAVICSGLF 875
R +S ++L+ +H L ++ + + GL+ +++ +S++ VI +G F
Sbjct: 673 RFHVSLRSLKEMHLLVQELRWRCTNLGLIPFAVNPSQMMGDREKSIILKVIIAGAF 728
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 207/664 (31%), Positives = 340/664 (51%), Gaps = 70/664 (10%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+LP + ++E +L AI N V+++ GETGCGKTTQ+PQYIL+ +SG+ +CNI+
Sbjct: 108 LNRDKNLPIYAKREEILAAINANPVVILKGETGCGKTTQVPQYILDEGYKSGK--YCNIV 165
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER Y+V L ++T LL+CT+G+LL L+ +
Sbjct: 166 VTQPRRIAAISIANRVCQEREWQQDTVCSYQVGLHRPTSLEDTRLLYCTTGVLLNNLIRN 225
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER + DFLLIV++ LL R +++ILMSAT++A S+YF
Sbjct: 226 KTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKIILMSATIDARELSDYFTTT 285
Query: 421 PTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQR--QLLPRKRKNQI 478
+I + H +E D G K WK + QL+P+ +
Sbjct: 286 NSIPPVISASHGRKHSIEKFYR------------DQMGSIK-WKEEEDDQLVPQINDHGY 332
Query: 479 TALVEDALHKSNFEN----YSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVF 534
A V+ + N E +S + D + GAVL+F
Sbjct: 333 RAAVKIIMVIDNMEREGAIHSRMSYDEALRY-----------------------GAVLIF 369
Query: 535 MTGWEDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATN 593
+ G +I + + + + L D N +V ++ C M Q+ +F PP RKI+L TN
Sbjct: 370 LPGIYEIDTMAENI-TLMLENDRNVKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILTTN 428
Query: 594 MAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCY 653
+AE+SIT+ D+ +V+D K D N L +W S+A+ RQR GR GR++ G+ Y
Sbjct: 429 IAESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVY 488
Query: 654 HLYPRCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAV 712
+ + Y+ +E+ +PE+LR PL + L+ K L++GS E L+ AL PP +QN +
Sbjct: 489 RMVNKSFYQREMSEFGIPEMLRLPLQNSVLRAKELEMGSPVEILALALSPPNLSDIQNTI 548
Query: 713 DFLKRIGAL----DEKEN-----LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIV 763
LK +GAL D N +T G +S LP+DP+L +++++G +F + + +
Sbjct: 549 LLLKEVGALFLTVDGVYNAMDGDVTYWGTIMSRLPLDPRLSRLIILGYVFNLLEEAIIMA 608
Query: 764 SGLSVRDPFLL--PQEKKNLAEI----AKSRFSAKDYSDHMALVRAYEGWKDAEREG--- 814
+GLS+R ++ + A+ F+ SD +A+ R Y + + G
Sbjct: 609 AGLSMRGLYVHEGSSSRSTRAQFDSFWMHYIFADGSGSDLVAIWRVYLTYLNMVEIGHEQ 668
Query: 815 -SGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHN--QSLVRAVIC 871
S + R +S ++L+ +H L ++ + GL+ +++ + +S + VI
Sbjct: 669 ESAIRWANRFHVSLRSLKEMHLLVQELRVRCTNLGLIPFSVNPSQIMDDREKSFILKVII 728
Query: 872 SGLF 875
+G F
Sbjct: 729 AGAF 732
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 296 bits (759), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 333/625 (53%), Gaps = 65/625 (10%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+LP + +++++++AI N V+++ GETGCGKTTQ+PQYI++ ++ + +CNI+
Sbjct: 109 LNRDKTLPIYTQRDQIMKAIRENTVVILKGETGCGKTTQVPQYIIDEAYQNRQ--YCNIV 166
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RVS ER G Y+V L G ++ LL+CT+G+LL L++
Sbjct: 167 VTQPRRIAAISIANRVSQERHWEPGTVCSYQVGLHRQSGSEDARLLYCTTGVLLNFLINH 226
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYF--- 417
L TH+ +DE+HER DFLLIV++ LL R +++ILMSAT+++ F YF
Sbjct: 227 KTLTHYTHIVLDEVHERDQEMDFLLIVVRRLLATNSRHVKVILMSATIDSREFVQYFATK 286
Query: 418 -GGAPTIHIP-GFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRK 475
G P I+ G YP+ F D L+ ++ N + + ++L
Sbjct: 287 NGIPPVINASHGRKYPL-VKFYRDQLKNMQWQEDQPNPDEPGMGSHGYSAAIKIL----- 340
Query: 476 NQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFM 535
LV D + + E S R+ + NL G+VL+F+
Sbjct: 341 -----LVIDNMERRT-EGQSQRSYEE-----------NLKT------------GSVLIFL 371
Query: 536 TGWEDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNM 594
G +I + + + H + +P +V ++ CH M Q+ +F P RKI+L TN+
Sbjct: 372 PGINEIDNMAESI-DHVMQENPALKVSIIRCHSLMTPDSQRDVFASPPVGYRKIILTTNI 430
Query: 595 AEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYH 654
AE+SIT+ D+ +V+D AK D N L W S+++ RQR GR GR++ G+ Y
Sbjct: 431 AESSITVPDVSYVIDFCLAKVLVTDTATNFSSLRLVWASKSNCRQRAGRVGRLRSGRVYR 490
Query: 655 LYPRCVY-EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVD 713
+ P+ Y + E+ +PE+LR+PL S L+ K L +G E L+ AL PP+ ++N +
Sbjct: 491 MVPKSFYMKHMLEFGVPEMLRSPLESSVLKAKELNMGPPIEMLALALSPPKLSDIRNTIL 550
Query: 714 FLKRIGAL---------DEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVS 764
LK +GAL + +LT G ++ LP+D +L +++++G +F C D + + +
Sbjct: 551 LLKEVGALYPTVDGNYVELDGDLTPWGSIMTRLPLDIRLSRLVLLGYVFNCLDEAIVMAA 610
Query: 765 GLSVRDPFLLPQE---KKNLAEIAKSRFSAKDYSDHMALVRAYEGW----KDAEREGSGY 817
GLSVR +L QE + A F+ SD +A+ R Y+ + ++ + S
Sbjct: 611 GLSVRGLYL--QEAGFQSYEAYWMHYVFADGSSSDLVAIWRFYKTYLNMCENRIMQESAA 668
Query: 818 EYCWRNFLSAQTLQAIHSLRKQFTF 842
++ R +S ++L+ +H L ++ +
Sbjct: 669 QWARRYHISLRSLKEMHLLVQELQY 693
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 296 bits (758), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 198/669 (29%), Positives = 334/669 (49%), Gaps = 80/669 (11%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ KSLP + ++E ++ AI N V+++ GETGCGKTTQ+P IL + S +CNI+
Sbjct: 110 LNRDKSLPIYAKREEIINAINENPVVIVKGETGCGKTTQVPP-ILFWMMVSKAKQYCNIV 168
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGM--KGKNTHLLFCTSGILLRRLLS 360
TQPRRI+A++++ RV ER G GY+V L + +T LL+CT+G+LL L++
Sbjct: 169 VTQPRRIAAISIANRVCQERQWQPGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVN 228
Query: 361 DHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGG 419
+ L TH+ +DE+HERG DFLLIV++ LL R +++ILMSAT+N S+YF
Sbjct: 229 NKTLTHYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRHVKVILMSATINPRELSDYFAN 288
Query: 420 APTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQIT 479
+ PV A + Y L ++ G ++ + R T
Sbjct: 289 ESS------APPVIAASYGRNFTVEKYYRDQLQSINWEGHQEDINSPGITQEGYRSAIKT 342
Query: 480 ALVEDALHKS---NFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMT 536
LV D + ++ ++Y+ R+ G++L+F+
Sbjct: 343 ILVIDNMERNERGTGKSYNQSLRE----------------------------GSILIFLP 374
Query: 537 GWEDISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAE 596
G +I+ + D LK + ++ CH M + +Q+ IF+ +PP RKI++ATN+AE
Sbjct: 375 GVGEINNMSDMLKDMANHDPIMKFNMVRCHSLMTSEDQREIFQPSPPGYRKIIMATNVAE 434
Query: 597 ASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLY 656
+SIT+ D+ +++D K D N L +W S+ + RQR GR GR++ G+ Y +
Sbjct: 435 SSITVPDVSYIIDFCLEKVLVTDTSTNFSSLRLAWASKTNCRQRAGRVGRLRNGRVYRMV 494
Query: 657 PRCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFL 715
+ Y+ +EY +PE+LR+PL + L+ K L++G+ E L+ AL PP + N + L
Sbjct: 495 TKSFYQRELSEYSVPEMLRSPLQNCVLKAKELKMGTPVEMLALALSPPNLSDICNTILML 554
Query: 716 KRIGAL--------DEKE-NLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGL 766
K +GAL D ++ ++T G +S LP+D L +++++G +F D + I +GL
Sbjct: 555 KEVGALFPTMDGTYDPRDGDITYWGTIMSKLPLDTHLSRLIILGYVFNLVDEAIIIAAGL 614
Query: 767 SVRDPFLLPQEKKNLAEIAKSRFSAKDY-----------SDHMALVRAYEGWKDAEREG- 814
+VR + I +R A +Y SD + + R Y + + G
Sbjct: 615 TVRGIY-----------IDSARLGADNYWMHYVFADGSGSDLVGIWRVYLTYLNMCENGL 663
Query: 815 ---SGYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQS---LVRA 868
+ ++ R LS + L +H L + LL + +++S ++ +++
Sbjct: 664 QKDASIQWAKRFHLSLRALSEMHLLVQDLRLRCEKLSLLPLNFPTHRISDDREKAIMLKV 723
Query: 869 VICSGLFPG 877
+I +P
Sbjct: 724 IIAGSFYPN 732
>sp|Q9VF26|SPNE_DROME Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
melanogaster GN=spn-E PE=2 SV=1
Length = 1434
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 338/661 (51%), Gaps = 62/661 (9%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+L + ++E +L AI + V++I GETGCGKTTQ+PQYIL+ +SG+ +CNI+
Sbjct: 109 LNRDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGK--YCNIV 166
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER ++V L ++T LL+CT+G+LL L+++
Sbjct: 167 VTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINN 226
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER N DFLLIV++ LL R +++ILMSAT++A+ S+YF
Sbjct: 227 KTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTT 286
Query: 421 PTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQ---RQLLPRKRKNQ 477
+I T + H +E D G +W + Q +P K+
Sbjct: 287 NSIPPVITTNHRRKHSIEKFYR------------DQLGS-IIWNEEDVGHQQVPEINKHG 333
Query: 478 ITALVEDALHKSNFENYSS-RARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMT 536
A V+ + N E ++ ++R S EA+ GAVL+F+
Sbjct: 334 YRAAVKIIVIIDNMERKAAIQSRQSYD------------EALRY--------GAVLIFLP 373
Query: 537 GWEDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMA 595
G +I + + L L DPN +V ++ C M Q+ +F PP RKI+L TN+A
Sbjct: 374 GIYEIDTMAENLTCM-LENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIA 432
Query: 596 EASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHL 655
E+SIT+ D+ +V+D AK D ++ L +W S+A+ RQR GR GR++ G+ Y +
Sbjct: 433 ESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRM 492
Query: 656 YPRCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDF 714
+ Y+ E+ +PE+LR PL + L+ K L +GS E L+ AL PP + N +
Sbjct: 493 VNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILL 552
Query: 715 LKRIGAL--------DEKE-NLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSG 765
LK +GAL D + +LT G +S LP+D + +++++G IF + + I +G
Sbjct: 553 LKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAG 612
Query: 766 LSVRDPFLLPQEKKNLAE--IAKSRFSAKDYSDHMALVRAYEGWKDAEREG----SGYEY 819
LS F + L + FS SD +A+ R Y + + G S +
Sbjct: 613 LSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGHDQESAIRW 672
Query: 820 CWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQS---LVRAVICSGLFP 876
R +S ++L+ IH L ++ GL+ N++ ++ +++ +I +P
Sbjct: 673 AKRFHVSLRSLKEIHLLVQELRVRCTHLGLIPFPVNPNQMMDDREKAIMLKVIIAGAFYP 732
Query: 877 G 877
Sbjct: 733 N 733
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 314/583 (53%), Gaps = 54/583 (9%)
Query: 249 LPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 308
LP + KE ++ I N V++I G TG GK+TQLPQY+L+ + R AFCNI+ TQPR+
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQ--RSAFCNIVVTQPRK 191
Query: 309 ISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVT 368
I A +++ +S ER LG VGY+V LE + ++T L++ T+G+LL++++S +L T
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 369 HVFVDEIHERGMNEDFLLIVLKDLL-PRRRDLRLILMSATLNAELFSNYFGGAPTIHI-P 426
H+F+DE+HER DFLL+V++ LL R ++++LMSAT+N + F++YF + P
Sbjct: 252 HIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYFAVPVQNKMNP 311
Query: 427 GFTYPVQA--HFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVED 484
+ + V+ H +E+ Y L L + Y ++ + ++ + +L++
Sbjct: 312 AYVFEVEGKPHAIEE------YYLNDLGHI--YHSGLPYRLEEPVITKDVYEVAVSLIQ- 362
Query: 485 ALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCL 544
F++ + + +W+ G + +VLVF+ G +I+ +
Sbjct: 363 -----MFDDLDMKESGN-KTWS----GAQFVSER----------SSVLVFLPGLGEINYM 402
Query: 545 RDQLKSHPLLGD--PNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITIN 602
H LL + R+ + H S+ EQ +F P RKI+L+TN+AE+S+T+
Sbjct: 403 ------HELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVP 456
Query: 603 DIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYE 662
D+ +V+D + D N L SW S+ S QR+GRAGRV G CY L PR ++
Sbjct: 457 DVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIPRDFWD 516
Query: 663 -AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGAL 721
A ++ +PE+LR PL S L++K L +G L+ AL PP ++ + LK +GAL
Sbjct: 517 SAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGAL 576
Query: 722 D-----EKEN-----LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDP 771
E EN LT LG+ L+ LPV +LGK++V+G +F C D L I + LS+++
Sbjct: 577 AVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDECLIIAAALSLKNF 636
Query: 772 FLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREG 814
F +P + K FS SD +ALV A+ W+ + G
Sbjct: 637 FTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRG 679
>sp|B4HLH4|SPNE_DROSE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
sechellia GN=spn-E PE=3 SV=1
Length = 1434
Score = 292 bits (748), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 340/658 (51%), Gaps = 56/658 (8%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+L + ++E +L AI + VI+I GETGCGKTTQ+PQYIL+ +SG+ +CNI+
Sbjct: 109 LNRDKNLSIYAKREEILAAINAHPVIIIKGETGCGKTTQVPQYILDEAYKSGK--YCNIV 166
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER ++V L ++T LL+CT+G+LL L+++
Sbjct: 167 VTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINN 226
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER N DFLLIV++ LL R +++ILMSAT++A+ S+YF
Sbjct: 227 KTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFATT 286
Query: 421 PTIHIPGFTYPVQAHFLEDVL-EMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQIT 479
+I T + H +E + G + + V D Q +P K+
Sbjct: 287 NSIPPVITTNHGRKHSIEKFYRDQLGSIIWNEEDVGD-----------QHVPEINKHGYR 335
Query: 480 ALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWE 539
A V+ + N E + A S S+ + L + GAVL+F+ G
Sbjct: 336 AAVKIIVIIDNMERKA--AIQSRLSY----------DETLRY-------GAVLIFLPGIY 376
Query: 540 DISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEAS 598
+I + + + L D N +VL++ C M Q+ +F PP RKI+LATN+AE+S
Sbjct: 377 EIDTMAENITCM-LENDRNIKVLIVRCFSLMTPENQRDVFNPPPPGFRKIILATNIAESS 435
Query: 599 ITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPR 658
IT+ D+ +V+D K D ++ L +W S+A+ RQR GR GR++ G+ Y + +
Sbjct: 436 ITVPDVSYVIDFCLTKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNK 495
Query: 659 CVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKR 717
Y+ AE+ +PE+LR PL + L+ K L +GS E L+ AL PP +QN + LK
Sbjct: 496 HFYQREMAEFGIPEMLRLPLQNSVLKAKVLNMGSPMEILALALSPPNLSDIQNTILLLKE 555
Query: 718 IGAL--------DEKE-NLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSV 768
+GAL D + +LT G ++ LP+D + +++++G IF + + I +GLS
Sbjct: 556 VGALYLTVDGVYDALDGDLTYWGTIMARLPLDTRQSRLIILGYIFNMLEEAIIIAAGLST 615
Query: 769 RDPFLLPQEKKNLAE--IAKSRFSAKDYSDHMALVRAYEGW----KDAEREGSGYEYCWR 822
F + L + F+ SD +A+ R Y + + + S + R
Sbjct: 616 NGLFAHDGGRTQLGDSFWMHYIFADGSGSDLVAIWRVYLTYLSLVEIGHDQESAIRWAKR 675
Query: 823 NFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQS---LVRAVICSGLFPG 877
+S ++L+ IH L ++ GL+ +++ ++ +++ +I +P
Sbjct: 676 FHVSLRSLKEIHLLVQELRVRCMHLGLIPFSVNPSQMMDDREKAIMLKVIIAGAFYPN 733
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 311/583 (53%), Gaps = 53/583 (9%)
Query: 249 LPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 308
LP + KE ++ I N V++I G TG GK+TQLPQY+L+ + R AFCNI+ TQPR+
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQ--RSAFCNIVVTQPRK 191
Query: 309 ISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVT 368
I A +++ +S ER LG VGY+V LE ++T L++ T+G+LL++++S +L T
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 369 HVFVDEIHERGMNEDFLLIVLKDLL-PRRRDLRLILMSATLNAELFSNYFGGAPTIHI-P 426
HVF+DE+HER DFLL+V++ LL R +++ILMSAT+N + F++YF + P
Sbjct: 252 HVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNP 311
Query: 427 GFTYPVQA--HFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVED 484
+ + V+ H +E Y L L + G ++ + ++ + +L++
Sbjct: 312 AYVFEVEGKPHTIEQ------YYLNDLGHIYHSGLPP-YRLEEPVITKDVYEVAVSLIQ- 363
Query: 485 ALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDISCL 544
F++ + + +W+ G + +VLVF+ G +I+ +
Sbjct: 364 -----MFDDLDMKESGN-KTWS----GAQFVSER----------SSVLVFLPGLGEINYM 403
Query: 545 RDQLKSHPLLGD--PNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITIN 602
H LL + R+ + H S+ EQ +F P RKI+L+TN+AE+S+T+
Sbjct: 404 ------HELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVP 457
Query: 603 DIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYE 662
D+ +V+D + D N L SW S+ S QR+GRAGRV G CY L R ++
Sbjct: 458 DVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWD 517
Query: 663 -AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGAL 721
A ++ +PE+LR PL S L++K L +G L+ AL PP ++ + LK +GAL
Sbjct: 518 SAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGAL 577
Query: 722 D-----EKEN-----LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDP 771
E EN LT LG+ L+ LPV +LGK++V+G +F C D L I + LS+++
Sbjct: 578 AVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNF 637
Query: 772 FLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREG 814
F +P + K FS SD +ALV A+ W+ + G
Sbjct: 638 FTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRG 680
>sp|Q16JS8|SPNE_AEDAE Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti
GN=spn-E PE=3 SV=1
Length = 1374
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 213/663 (32%), Positives = 332/663 (50%), Gaps = 87/663 (13%)
Query: 249 LPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 308
LP K+ +L I N VIV+ G TGCGKTTQ+PQ+ILE R +CNII TQPR+
Sbjct: 36 LPIRHSKDDILARIRENPVIVLEGPTGCGKTTQVPQFILEEAYH--RKEYCNIIVTQPRK 93
Query: 309 ISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVT 368
I+AM++++RVS ER LG VG+KV L+ +T LL+CT+G+LL+ L++ + T
Sbjct: 94 IAAMSIAKRVSEERKCELGTLVGFKVGLKECLSPDTRLLYCTTGVLLQSLINSKTMANYT 153
Query: 369 HVFVDEIHERGMNEDFLLIVLKDLLPRRRD-LRLILMSATLNAELFSNYFGGAPTIHIPG 427
HV +DEIHER ++ DFLLIV++ L ++ILMSAT++++ F+ YF +
Sbjct: 154 HVILDEIHEREVDMDFLLIVVRRFLATNSSKTKVILMSATIDSKAFAEYFKTPKKV---- 209
Query: 428 FTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITALVEDALH 487
GY + VD R R ++ D L
Sbjct: 210 -----------------GYLTAPIISVD----------------RPRLYEVKEFYYDDLD 236
Query: 488 K------SNFEN--YSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWE 539
K ++EN SS A C LIE + R E VL+F+ G
Sbjct: 237 KLRLDFAIDYENPGISSHMYTVAAKLVLVCD--RLIENMHGE-ERMEYKPTVLIFLPGIN 293
Query: 540 DIS----CLRDQL------KSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIV 589
+I LR+ L K P L D +R+ H +P EQ +F K P RK++
Sbjct: 294 EIDRMDHVLRETLTRIVNPKEKPNL-DIHRL-----HSILPADEQVKVFRKPAPGQRKVI 347
Query: 590 LATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQP 649
L+TN+AE+SIT+ D+ F++D + D N L W SQA+ QR+GRAGRV
Sbjct: 348 LSTNIAESSITVPDVKFIIDFCLQRVLFTDTTTNFSTLRTEWASQANCIQRQGRAGRVMD 407
Query: 650 GQCYHLYPRCVYEAFAEYQL-PELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAV 708
G+ Y L R YE + PE+LR PL ++ L+ K L++G L+ A+ PP+ +
Sbjct: 408 GRVYRLVDRRFYENQMRFSTSPEILRCPLENVILKAKLLEMGPPHSILALAMNPPDLSDI 467
Query: 709 QNAVDFLKRIGALDEK---------ENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPV 759
+N V LK +GAL + +LT +G+ ++ LP+D ++ K++++G IF +
Sbjct: 468 RNTVLQLKELGALVQTVKGNYEQLDGDLTYMGRIMAKLPLDLRISKLIILGYIFSVLEES 527
Query: 760 LTIVSGLSVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYE- 818
+ I +G++ ++ FL + ++ K ++ SD +A++ AY WK + +E +G E
Sbjct: 528 IIIAAGMNEKNIFLNQNSVRGYSQ--KMYWADGSGSDGIAILNAYIAWK-SRKEQAGNES 584
Query: 819 ----YCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKL--SHNQSLVRAVICS 872
+ R L + L + L ++ L G+ + G + S ++++ VI +
Sbjct: 585 DMASWTRRMSLDLKCLMDMAELIREIKDRLNHVGMKEVSGPGRVVWSSREKTVILKVIMA 644
Query: 873 GLF 875
G F
Sbjct: 645 GAF 647
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 192/588 (32%), Positives = 311/588 (52%), Gaps = 63/588 (10%)
Query: 249 LPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 308
LP + KE ++ I N V++I G TG GK+TQLPQYIL+ ++ R A+C+I+ TQPR+
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPRK 189
Query: 309 ISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNLNGVT 368
I A +++ +S ER LG VGY+V LE + ++T L++ T+G+LL++++S +L T
Sbjct: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
Query: 369 HVFVDEIHERGMNEDFLLIVLKDLL-PRRRDLRLILMSATLNAELFSNYFG--------G 419
H+ +DE+HER DFLL+V++ LL R ++++LMSAT++ + F++YF
Sbjct: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNP 309
Query: 420 APTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQIT 479
A + G + V+ ++L D+ + KL+ + + +++ L+
Sbjct: 310 AYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLEEPVITKDIYEVAVSLI--------- 360
Query: 480 ALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWE 539
+ +D K + S A+ L +VLVF+ G
Sbjct: 361 QMFDDLDMKESGNKAWSGAQFVLER------------------------SSVLVFLPGLG 396
Query: 540 DISCLRDQLKS--HPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEA 597
+I+ + + L S H R+ + H S+ EQ +F P RKI+L+TN+AE+
Sbjct: 397 EINYMHELLTSLVH------KRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAES 450
Query: 598 SITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYP 657
S+T+ D+ +V+D + D N L SW S+ S QR+GRAGRV G CY L
Sbjct: 451 SVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVH 510
Query: 658 RCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLK 716
+ ++ + ++ +PE+LR PL S L++K L +G L+ AL PP ++ + LK
Sbjct: 511 KDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLK 570
Query: 717 RIGALD-----EKEN-----LTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGL 766
+GAL E EN LT LG+ L+ LPV+ +LGK++V+G +F C D L I + L
Sbjct: 571 EVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAAL 630
Query: 767 SVRDPFLLPQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGWKDAEREG 814
S+++ F +P + K FS SD +ALV A++ WK + G
Sbjct: 631 SLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTG 678
>sp|B3M383|SPNE_DROAN Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
ananassae GN=spn-E PE=3 SV=1
Length = 1429
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 335/665 (50%), Gaps = 71/665 (10%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+LP + ++E ++ AI +QV+++ GETGCGKTTQ+PQYIL+ +SG+ +CNI+
Sbjct: 105 LNRDKNLPIYAKREVIVNAINTHQVVILKGETGCGKTTQVPQYILDEGFKSGQ--YCNIV 162
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI A++++ RVS ER Y+V L + ++T LL+CT+G+LL L+ +
Sbjct: 163 VTQPRRIGAISIANRVSQERMWEPDTVCSYQVGLHRKQHLEDTRLLYCTTGVLLNSLIRN 222
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLP-RRRDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER + DFLLIV++ LL R +++ILMSAT++ F +YF
Sbjct: 223 KTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKVILMSATIDTREFCDYFSTK 282
Query: 421 PTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLLPRKRKNQITA 480
++ + H +E + +L S+N DD + ++ + K +I
Sbjct: 283 VSVPPVISASHGRKHSIE---KFYRDQLGSINWKDD--PDDGYQARIPDEAYKAAVKIIL 337
Query: 481 LVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWED 540
+V++ ++ N S ++ D S GAVL+F+ G +
Sbjct: 338 VVDNMERQA--ANQSEQSYDDAKS-----------------------QGAVLIFLPGIYE 372
Query: 541 ISCLRDQLKSHPLLGDPNRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASIT 600
I + + L + ++ ++ C M Q+ +F P RKI+LATN+AE+SIT
Sbjct: 373 IDNMAESLGNMTKEEPSMKLFIVRCFSLMTPDAQRDVFSPPPSGFRKIILATNIAESSIT 432
Query: 601 INDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCV 660
+ D+ +V+D K D N L +W S+A+ RQR GR GR++ G+ Y + +
Sbjct: 433 VPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVHKLF 492
Query: 661 YEA-FAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIG 719
Y+ E+ +PE+LR PL + L+ K L + E L+ AL PP +QN + LK +G
Sbjct: 493 YKTNMTEFGVPEMLRLPLQNSVLKAKLLDIAPPIEMLALALSPPNLSDIQNTILLLKEVG 552
Query: 720 AL---------DEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRD 770
AL + ++T G +S LP+D +L +++++G +F + + I +GLS+R
Sbjct: 553 ALFPTVDGEYCEVDGDITFWGIIMSRLPLDTRLSRLIILGYVFNLLEEAIVIAAGLSMRG 612
Query: 771 PFLLPQEKKNLAEIAKSRFSAKDY-----------SDHMALVRAYEGWKDAEREG----S 815
E + R ++ Y SD +A+ R Y +++ G S
Sbjct: 613 LS---------TEAGRGRLTSDAYWMNYVFADGSGSDLVAIWRIYRTYENMVANGMHQES 663
Query: 816 GYEYCWRNFLSAQTLQAIHSLRKQFTFILRDAGLLDEDGGNNKLSHNQS---LVRAVICS 872
+ R +S + L+ +H L ++ G++ + ++ + + L++ +I
Sbjct: 664 AEPWARRYHVSLRALKEMHLLVQELKSRCSQLGMISFNLSSSDMPDDLEKAILLKVIIAG 723
Query: 873 GLFPG 877
+P
Sbjct: 724 AFYPN 728
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ECM16 PE=1 SV=1
Length = 1267
Score = 276 bits (706), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 216/746 (28%), Positives = 349/746 (46%), Gaps = 131/746 (17%)
Query: 246 RKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGA-----FCN 300
R LP F E+ ++++AI N V++I GETG GKTTQ+PQ++ E+ G GA +
Sbjct: 388 RIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEA----GFGAEDSPDYPG 443
Query: 301 II-CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLL 359
++ TQPRR++A++++ERV+ E G+ G VGY++R + ++T + F T G+LLR ++
Sbjct: 444 MVGITQPRRVAAVSMAERVANELGD-HGHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM 502
Query: 360 SDHNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRR-----------RDLRLILMSATL 408
D L + + +DE HER +N D L+ +L + R + L+LI+MSATL
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL 562
Query: 409 NAELFSN----YFGGAPTIHIPGFTYPVQAHFLEDVLEMTGYKLTSLNQVDD-------- 456
FS + P + + +PV HF + T+ N D+
Sbjct: 563 RVSDFSENKTLFPIAPPVLQVDARQFPVSIHF---------NRRTAFNYTDEAFRKTCKI 613
Query: 457 -------------YGQEKLW---KTQRQLLPRKRKNQITALVEDALHKSNFENYSSRARD 500
GQ+++ K R+ P K+ ++ +E + K + ++
Sbjct: 614 HQKLPPGAILVFLTGQQEITHMVKRLRKEFPFKKNSKYNKDLETPVSKMGINSKTTDLEA 673
Query: 501 SLASWTADCIGFNLIEAVLCHICRKECPGAVLVFMTGWEDIS---CLRDQLKSHPLLGDP 557
++ I + ++ + + + G E+ Q + PL P
Sbjct: 674 EDIDFSVQVIDQDKFKSAIRYEEDEGNSGNGEDEEDEEEEGFEEVLTEGQTANDPLYVLP 733
Query: 558 NRVLLLTCHGSMPTSEQKFIFEKAPPNIRKIVLATNMAEASITINDIVFVVDCGKAKETT 617
LL T EQ +F+K P R ++ATN+AE S+TI + +VVD G++KE
Sbjct: 734 LYSLLPT-------KEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERK 786
Query: 618 YDALNNTPCLLPSWISQASARQRRGRAGRVQPGQCYHLYPRCVYEA-FAEYQLPELLRTP 676
Y+ N W+S+ASA QR GRAGR PG CY LY V+E F ++ PE+LR P
Sbjct: 787 YNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMP 846
Query: 677 LNSLCLQIKSLQVGSIGEFLSAALQPPEPLAVQNAVDFLKRIGALDEKENLTNLGKFLSM 736
+ S+ LQ+KS+ + +I F PP+ +A+ A+ L+ +GALD KE +T GK +S+
Sbjct: 847 VESIVLQMKSMAIHNIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSL 904
Query: 737 LPVDPKLGKMLVMGAIFRCFDPVLTIVSGLSVRDPF------------------------ 772
P+ P+ KML++ C ++ IVS LSV DPF
Sbjct: 905 FPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPDENLDDK 964
Query: 773 ----------LLPQEKKNL-AEIAKSR--FSAKD-YSDHMALVRAYEGWKDAEREGSGYE 818
+ P+ KK L ++ KSR FS D +SD L+ +E
Sbjct: 965 IREHDESTPGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEI- 1023
Query: 819 YCWRNFLSAQTLQAIHSLRKQFTFILRDAG--------LLDEDGGNNKLSHNQ-SLVRAV 869
+ +NFL + ++ I LRKQ +I++ + +ED ++ S Q L++ +
Sbjct: 1024 FMKKNFLRGKLMEEIVKLRKQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLLKQM 1083
Query: 870 ICSG-----------LFPGITSVVHR 884
IC+G LFP + +R
Sbjct: 1084 ICAGFVDHVAVRADVLFPDDAKITNR 1109
>sp|B4K5R2|SPNE_DROMO Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
mojavensis GN=spn-E PE=3 SV=1
Length = 1431
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/620 (30%), Positives = 315/620 (50%), Gaps = 72/620 (11%)
Query: 243 LDFRKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNII 302
L+ K+LP ++++E +L AI N V+++ GETGCGKTTQ+PQYIL+ + R FCNI+
Sbjct: 111 LNRNKNLPIYEQREDILAAIRENPVVILKGETGCGKTTQVPQYILDEAFK--RREFCNIV 168
Query: 303 CTQPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKG-KNTHLLFCTSGILLRRLLSD 361
TQPRRI+A++++ RV ER G Y+V L ++T LL+CT+G+LL L+
Sbjct: 169 VTQPRRIAAISIANRVCHERKWQPGTVCSYQVGLHRQSNLEDTRLLYCTTGVLLNNLVRV 228
Query: 362 HNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRR-RDLRLILMSATLNAELFSNYFGGA 420
L TH+ +DE+HER + DFLL+V++ LL R +++ILMSAT++ FS YF +
Sbjct: 229 KTLTQYTHIILDEVHERDQDMDFLLLVVRRLLALNSRHVKVILMSATIDTREFSKYFAMS 288
Query: 421 ----PTIHIP-GFTYPVQAHFLEDVLEMTGYKLTSLNQVDDYGQEKLWKTQRQLL----- 470
P + G +P+ F D L+ +K G E + LL
Sbjct: 289 SSLPPVVTASHGRKFPL-VKFYRDQLKNIHWKDEPQRTTPGIGPEGYSDAIKLLLVIDNM 347
Query: 471 PRKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKECPGA 530
RK NQ E+A GA
Sbjct: 348 ERKADNQSQQSYEEAKRT----------------------------------------GA 367
Query: 531 VLVFMTGWEDISCLRDQLKSHPLLGDPN-RVLLLTCHGSMPTSEQKFIFEKAPPNIRKIV 589
VL+F+ G +I + + + + +PN ++ ++ CH M Q+ +F P RK++
Sbjct: 368 VLIFLPGIHEIDTMAEHI-GRIVDENPNFKISIVRCHSLMSPDSQEEVFLPPPLGHRKVI 426
Query: 590 LATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQP 649
L TN++E+SIT+ D+ +V+D K D +N L W S+ + RQR GR GR++
Sbjct: 427 LTTNISESSITVPDVSYVIDFCLTKVLHTDTASNFSSLRLEWASKVNCRQRAGRVGRLRS 486
Query: 650 GQCYHLYPRCVY-EAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPLAV 708
G+ Y + + Y E+ +PE+LR+PL + L+ K L++G+ E L+ A+ PP +
Sbjct: 487 GRVYRMVTKDFYMNHMNEFGIPEMLRSPLQNSVLKAKELEMGNPSEILALAMSPPNLSDI 546
Query: 709 QNAVDFLKRIGAL---------DEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPV 759
QN V LK +GAL + +L+ GK +S P+D +L +++++G +F C D
Sbjct: 547 QNTVLLLKEVGALYTTVDGVYEELDGDLSFWGKIMSKFPLDVRLSRLIILGYVFNCLDEA 606
Query: 760 LTIVSGLSVRDPFLL-PQEKKNLAEIAKSRFSAKDYSDHMALVRAYEGW----KDAEREG 814
+ I +G++VR ++ + + N A F+ SD + + R Y + +D +
Sbjct: 607 IVIAAGMTVRSLYVTGSRGQMNEAFWMHYIFADGSGSDMIGIWRVYRIYLNMCQDRMLKE 666
Query: 815 SGYEYCWRNFLSAQTLQAIH 834
S ++ R ++ ++L+ +H
Sbjct: 667 SAQQWARRFNVNLRSLKEMH 686
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 210/662 (31%), Positives = 322/662 (48%), Gaps = 103/662 (15%)
Query: 246 RKSLPSFKEKERLLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCNIIC-T 304
R +LP E++R+++ I N V++I G TG GKTTQLPQ++ E+ S +I T
Sbjct: 395 RLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAIT 454
Query: 305 QPRRISAMAVSERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDHNL 364
QPRR++A+++++RVS E V Y++R + +T + F T GILLR L SD L
Sbjct: 455 QPRRVAAVSIAKRVSEELTG-FSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLL 513
Query: 365 NGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRD----------LRLILMSATLNAELFS 414
+ V VDE HER +N D LL +L ++ RR+ L+LI+MSATL FS
Sbjct: 514 TAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFS 573
Query: 415 N----YFGGAPTIHIPGFTYPVQAHF----LEDVLEMTGYKLTSLNQVDDYGQEKLWKTQ 466
+ P I I YPV HF D L+ K+ +++ G ++ T
Sbjct: 574 ENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTG 633
Query: 467 RQLLPRKRKNQITALVEDALHKSNFENYSSRARDSLASWTADCIGFNLIEAVLCHICRKE 526
+Q + Q+ ++ +S F SRAR ++ T +L
Sbjct: 634 QQEV-----EQLCQMLRKRFVRS-FRPLKSRARIVVSRKTMSVENEDL------------ 675
Query: 527 CPGAVLVFMTGWEDISCLRDQLKSHPLLGDPNRVL-LLTCHGSMPTSEQKFIFEKAPPNI 585
+ EDI + S D + + +L + + T +Q +F+ +P
Sbjct: 676 --------QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGH 727
Query: 586 RKIVLATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAG 645
R ++ATN+AE SITI +I +VVDCGKAKE Y+ + WIS+A+A QR GRAG
Sbjct: 728 RMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAG 787
Query: 646 RVQPGQCYHLYPRCVYE-AFAEYQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPE 704
R PG CY LY V++ +F + LPE+LRTP+ S+ LQ+K++ + +I F P
Sbjct: 788 RTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANF-------PF 840
Query: 705 PLA-----VQNAVDFLKRIGALDEKENLTNLGKFLSMLPVDPKLGKMLVMGAIFRCFDPV 759
P + ++ ++ L +GA+D + LT LG+ +S+ P+ P+ KML++G C V
Sbjct: 841 PTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYV 900
Query: 760 LTIVSGLSVRDPFLLPQ-------------EKKNLA---EI---------------AKSR 788
+ +VS LS+ F+ Q E+ +L EI A SR
Sbjct: 901 IALVSALSINQLFVSKQSLLYDAHDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISR 960
Query: 789 FSAKDYSDHMAL-----VRAYEGWKDAEREGSGYEYCWRNFLSAQTLQAIHSLRKQFTFI 843
F A D D AL V AY+ D + +C N+L + L+ + +LRKQ +
Sbjct: 961 FQAID-PDAPALSLLSAVCAYDYASDKRK------FCKENYLREKALEEVTNLRKQIIGL 1013
Query: 844 LR 845
L+
Sbjct: 1014 LK 1015
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,234,147
Number of Sequences: 539616
Number of extensions: 13969233
Number of successful extensions: 38674
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 37834
Number of HSP's gapped (non-prelim): 376
length of query: 913
length of database: 191,569,459
effective HSP length: 127
effective length of query: 786
effective length of database: 123,038,227
effective search space: 96708046422
effective search space used: 96708046422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)