Query 002526
Match_columns 912
No_of_seqs 386 out of 1469
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 01:46:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002526.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002526hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2130 Phosphatidylserine-spe 100.0 9.9E-74 2.2E-78 603.3 14.7 395 47-490 1-407 (407)
2 PF13621 Cupin_8: Cupin-like d 100.0 6.4E-38 1.4E-42 325.9 12.3 216 140-370 1-249 (251)
3 KOG2131 Uncharacterized conser 100.0 4.8E-37 1E-41 331.0 8.9 318 129-476 27-398 (427)
4 KOG2132 Uncharacterized conser 99.9 6.4E-27 1.4E-31 251.1 3.9 220 130-362 127-355 (355)
5 KOG2508 Predicted phospholipas 99.9 9.4E-22 2E-26 212.7 11.8 227 132-366 24-307 (437)
6 cd05155 APH_ChoK_like_1 Unchar 99.5 3.6E-14 7.8E-19 148.7 12.6 108 540-719 3-111 (235)
7 PF01636 APH: Phosphotransfera 99.4 4.8E-13 1E-17 135.6 11.3 192 543-881 4-202 (239)
8 cd05154 ACAD10_11_like Acyl-Co 99.4 1.2E-11 2.5E-16 125.5 16.0 111 543-719 5-123 (223)
9 cd05152 MPH2' Macrolide 2'-Pho 99.4 3.9E-12 8.4E-17 138.0 12.7 204 526-881 2-221 (276)
10 cd05150 APH Aminoglycoside 3'- 99.3 1.2E-11 2.7E-16 129.7 14.4 97 545-718 9-109 (244)
11 PF02373 JmjC: JmjC domain, hy 99.3 2.3E-13 4.9E-18 126.8 1.1 110 253-366 1-114 (114)
12 COG2850 Uncharacterized conser 99.3 6.3E-12 1.4E-16 138.5 11.6 209 135-384 12-229 (383)
13 TIGR02172 Fb_sc_TIGR02172 Fibr 99.2 1.7E-10 3.6E-15 121.8 15.7 177 542-881 7-187 (226)
14 PLN02876 acyl-CoA dehydrogenas 99.2 2.2E-10 4.7E-15 141.2 17.0 208 542-881 44-262 (822)
15 PF08007 Cupin_4: Cupin superf 99.2 4.2E-11 9.1E-16 132.6 8.9 104 250-376 114-218 (319)
16 COG3173 Predicted aminoglycosi 99.0 1.7E-09 3.8E-14 119.8 11.3 202 540-886 28-239 (321)
17 cd05153 HomoserineK_II Homoser 99.0 6.8E-09 1.5E-13 111.9 14.9 204 522-881 2-210 (296)
18 KOG1356 Putative transcription 99.0 5.7E-11 1.2E-15 140.8 -2.0 243 138-384 528-849 (889)
19 KOG2997 F-box protein FBX9 [Ge 98.9 3.2E-10 6.9E-15 123.1 3.2 71 17-87 103-188 (366)
20 PRK10593 hypothetical protein; 98.8 6.4E-08 1.4E-12 106.2 16.8 181 540-829 18-209 (297)
21 KOG1633 F-box protein JEMMA an 98.8 1.2E-08 2.6E-13 123.6 12.0 219 141-376 8-239 (776)
22 PF12937 F-box-like: F-box-lik 98.8 1.7E-09 3.6E-14 87.0 3.2 47 21-67 1-47 (47)
23 TIGR00938 thrB_alt homoserine 98.7 2.2E-07 4.7E-12 101.6 15.9 205 522-881 10-222 (307)
24 PRK11768 serine/threonine prot 98.7 3E-07 6.4E-12 102.1 15.7 118 524-717 16-138 (325)
25 KOG3706 Uncharacterized conser 98.6 2.9E-08 6.3E-13 112.2 4.4 112 252-383 319-433 (629)
26 PRK05231 homoserine kinase; Pr 98.6 1.3E-06 2.8E-11 95.7 16.9 113 524-715 12-131 (319)
27 cd05151 ChoK Choline Kinase (C 98.6 3.5E-07 7.6E-12 89.7 10.6 94 543-716 5-104 (170)
28 TIGR02721 ycfN_thiK thiamine k 98.5 9.2E-07 2E-11 94.1 12.0 39 674-717 64-102 (256)
29 cd05157 ETNK_euk Ethanolamine 98.3 4E-06 8.7E-11 87.4 11.8 39 675-718 69-107 (235)
30 cd05120 APH_ChoK_like Aminogly 98.3 9.1E-06 2E-10 75.9 11.8 94 546-715 9-106 (155)
31 COG2334 Putative homoserine ki 98.2 2.9E-05 6.3E-10 87.1 15.9 209 526-887 18-239 (331)
32 smart00256 FBOX A Receptor for 98.1 3.3E-06 7.2E-11 64.8 4.9 40 24-63 1-40 (41)
33 PF03881 Fructosamin_kin: Fruc 98.1 1.7E-05 3.6E-10 87.4 12.0 193 520-829 2-204 (288)
34 PRK06148 hypothetical protein; 98.1 2.5E-05 5.4E-10 99.1 14.1 49 811-889 201-249 (1013)
35 PRK06149 hypothetical protein; 98.1 3.8E-05 8.3E-10 97.0 15.2 69 524-601 22-95 (972)
36 cd05156 ChoK_euk Choline Kinas 98.0 5.8E-05 1.3E-09 82.0 12.6 39 675-718 74-112 (302)
37 PF00646 F-box: F-box domain; 98.0 4.5E-06 9.7E-11 66.9 2.6 45 21-65 3-47 (48)
38 COG3001 Uncharacterized protei 97.7 0.00069 1.5E-08 72.8 14.5 197 520-829 2-203 (286)
39 PLN02236 choline kinase 97.7 0.00091 2E-08 75.3 15.6 40 810-881 197-236 (344)
40 TIGR02904 spore_ysxE spore coa 97.5 0.00068 1.5E-08 74.6 11.6 149 673-881 81-231 (309)
41 TIGR02906 spore_CotS spore coa 97.4 0.0029 6.3E-08 68.7 15.3 36 672-715 69-104 (313)
42 COG3231 Aph Aminoglycoside pho 97.4 0.0014 3E-08 70.2 11.4 125 672-881 88-220 (266)
43 PRK09550 mtnK methylthioribose 97.3 0.0016 3.4E-08 75.2 12.4 113 529-713 18-145 (401)
44 PLN02756 S-methyl-5-thioribose 97.1 0.0047 1E-07 71.5 13.4 103 541-711 37-148 (418)
45 PLN02421 phosphotransferase, a 97.0 0.0083 1.8E-07 67.1 13.4 40 810-881 179-218 (330)
46 PRK14879 serine/threonine prot 97.0 0.0069 1.5E-07 61.9 11.4 40 673-713 74-113 (211)
47 PF07914 DUF1679: Protein of u 96.9 0.0026 5.6E-08 73.7 8.4 150 673-879 150-306 (414)
48 COG2140 Thermophilic glucose-6 96.9 0.0035 7.5E-08 66.1 8.5 73 258-369 88-162 (209)
49 PTZ00296 choline kinase; Provi 96.9 0.024 5.2E-07 66.3 16.3 50 543-599 112-176 (442)
50 PF04655 APH_6_hur: Aminoglyco 96.8 0.004 8.7E-08 67.7 8.2 104 675-829 71-176 (253)
51 KOG1164 Casein kinase (serine/ 96.7 0.01 2.2E-07 65.8 10.9 100 543-712 25-139 (322)
52 KOG2120 SCF ubiquitin ligase, 96.7 0.0017 3.8E-08 71.6 4.6 47 20-66 97-143 (419)
53 PRK10271 thiK thiamine kinase; 96.6 0.0033 7.2E-08 65.6 6.2 38 810-881 74-111 (188)
54 PTZ00384 choline kinase; Provi 96.4 0.12 2.6E-06 59.6 17.5 37 674-717 125-163 (383)
55 smart00558 JmjC A domain famil 96.2 0.0041 8.8E-08 52.0 3.2 49 230-282 7-56 (57)
56 TIGR02457 TreS_Cterm trehalose 96.2 0.048 1E-06 65.2 13.3 207 545-829 175-395 (528)
57 TIGR03724 arch_bud32 Kae1-asso 96.2 0.04 8.7E-07 55.9 11.0 37 673-713 72-108 (199)
58 PF01633 Choline_kinase: Choli 95.7 0.009 1.9E-07 62.0 3.9 40 810-881 140-179 (211)
59 PF06881 Elongin_A: RNA polyme 94.7 0.028 6E-07 53.6 3.3 67 18-86 1-72 (109)
60 smart00587 CHK ZnF_C4 abd HLH 94.7 0.26 5.6E-06 51.1 10.7 71 778-881 90-160 (196)
61 PF02958 EcKinase: Ecdysteroid 94.2 0.21 4.5E-06 54.3 9.2 43 810-880 212-254 (294)
62 PF00190 Cupin_1: Cupin; Inte 93.6 0.15 3.2E-06 50.5 6.2 75 259-368 43-121 (144)
63 cd00180 PKc Catalytic domain o 93.6 0.22 4.7E-06 48.4 7.3 48 672-719 65-116 (215)
64 KOG0281 Beta-TrCP (transducin 93.3 0.087 1.9E-06 59.2 4.3 50 21-70 75-128 (499)
65 KOG0583 Serine/threonine prote 93.2 0.17 3.6E-06 58.0 6.6 43 814-888 140-184 (370)
66 TIGR03404 bicupin_oxalic bicup 93.1 0.31 6.8E-06 55.9 8.6 61 259-358 254-314 (367)
67 KOG2132 Uncharacterized conser 93.0 0.03 6.5E-07 62.4 0.3 96 256-360 180-280 (355)
68 PF06560 GPI: Glucose-6-phosph 92.9 0.21 4.5E-06 52.2 6.1 39 331-369 108-146 (182)
69 PRK09605 bifunctional UGMP fam 92.8 0.16 3.6E-06 60.4 6.2 37 672-713 410-446 (535)
70 PRK04190 glucose-6-phosphate i 92.5 0.56 1.2E-05 49.3 8.8 36 332-367 119-154 (191)
71 PF06293 Kdo: Lipopolysacchari 91.9 0.65 1.4E-05 48.5 8.5 43 674-716 93-139 (206)
72 TIGR03037 anthran_nbaC 3-hydro 91.2 0.93 2E-05 46.5 8.4 77 250-367 28-104 (159)
73 PRK15123 lipopolysaccharide co 90.4 1.6 3.4E-05 48.1 10.0 44 673-716 110-159 (268)
74 KOG1163 Casein kinase (serine/ 90.1 0.17 3.6E-06 55.2 2.1 17 812-828 129-145 (341)
75 PRK13264 3-hydroxyanthranilate 90.1 1.2 2.6E-05 46.4 8.2 75 250-365 34-108 (177)
76 KOG0596 Dual specificity; seri 89.8 0.86 1.9E-05 54.5 7.7 42 546-590 372-419 (677)
77 KOG3926 F-box proteins [Amino 89.7 0.35 7.6E-06 53.0 4.1 67 20-86 201-277 (332)
78 cd05084 PTKc_Fes Catalytic dom 88.1 2.3 4.9E-05 44.2 8.8 47 672-718 67-117 (252)
79 PRK01723 3-deoxy-D-manno-octul 87.8 2.1 4.5E-05 46.0 8.5 40 672-715 120-162 (239)
80 cd06621 PKc_MAPKK_Pek1_like Ca 87.5 2.3 4.9E-05 45.5 8.5 50 672-721 75-131 (287)
81 cd05097 PTKc_DDR_like Catalyti 87.3 2.6 5.6E-05 45.2 8.8 48 672-719 91-153 (295)
82 PRK09902 hypothetical protein; 86.9 4.3 9.3E-05 43.7 10.0 103 546-715 29-148 (216)
83 cd05059 PTKc_Tec_like Catalyti 86.5 3.7 8E-05 42.9 9.3 48 672-719 73-124 (256)
84 KOG0274 Cdc4 and related F-box 86.1 0.39 8.4E-06 57.8 2.0 50 21-70 108-157 (537)
85 cd05611 STKc_Rim15_like Cataly 86.1 3.1 6.7E-05 43.4 8.5 50 672-721 71-123 (260)
86 COG3178 Predicted phosphotrans 86.0 0.51 1.1E-05 52.9 2.6 41 810-879 197-237 (351)
87 TIGR01767 MTRK 5-methylthiorib 85.6 1.1 2.4E-05 51.5 5.2 36 810-879 189-224 (370)
88 cd05079 PTKc_Jak1_rpt2 Catalyt 85.2 3.5 7.6E-05 43.9 8.5 49 671-719 81-133 (284)
89 cd06623 PKc_MAPKK_plant_like C 85.2 3.1 6.6E-05 43.1 7.9 48 672-719 73-124 (264)
90 cd05122 PKc_STE Catalytic doma 84.9 3.3 7.1E-05 42.1 7.8 48 672-719 71-122 (253)
91 cd05088 PTKc_Tie2 Catalytic do 84.6 4.2 9.1E-05 44.0 8.9 48 672-719 82-148 (303)
92 cd05098 PTKc_FGFR1 Catalytic d 84.3 3.7 8E-05 44.4 8.3 47 672-718 98-163 (307)
93 cd00192 PTKc Catalytic domain 84.2 5 0.00011 41.2 8.9 50 671-720 69-130 (262)
94 smart00835 Cupin_1 Cupin. This 84.0 4.4 9.6E-05 40.1 8.0 27 332-358 74-100 (146)
95 cd06614 STKc_PAK Catalytic dom 83.6 5.7 0.00012 42.2 9.3 50 672-721 89-142 (286)
96 cd06627 STKc_Cdc7_like Catalyt 83.3 4.5 9.8E-05 41.5 8.1 50 672-721 73-125 (254)
97 cd05061 PTKc_InsR Catalytic do 83.1 5.4 0.00012 42.6 8.9 48 672-719 83-143 (288)
98 cd08219 STKc_Nek3 Catalytic do 83.0 6.6 0.00014 40.8 9.3 49 672-720 72-125 (255)
99 KOG1989 ARK protein kinase fam 82.8 1.3 2.9E-05 54.9 4.5 53 669-721 112-170 (738)
100 TIGR02466 conserved hypothetic 82.5 5.1 0.00011 42.5 8.2 34 334-367 163-199 (201)
101 cd06640 STKc_MST4 Catalytic do 82.4 6.8 0.00015 41.5 9.2 50 672-721 76-127 (277)
102 KOG1166 Mitotic checkpoint ser 82.3 0.94 2E-05 57.8 3.1 18 812-829 812-829 (974)
103 cd06622 PKc_MAPKK_PBS2_like Ca 82.3 3.5 7.6E-05 43.7 7.0 42 672-713 73-120 (286)
104 KOG0670 U4/U6-associated splic 82.2 0.75 1.6E-05 54.7 2.0 19 811-829 553-571 (752)
105 TIGR03404 bicupin_oxalic bicup 82.2 5.8 0.00013 45.8 9.1 65 254-359 72-136 (367)
106 cd05033 PTKc_EphR Catalytic do 82.0 6.9 0.00015 41.0 9.0 48 672-719 79-130 (266)
107 cd05574 STKc_phototropin_like 81.9 5.2 0.00011 43.3 8.3 48 672-719 75-127 (316)
108 cd08529 STKc_FA2-like Catalyti 81.8 5.7 0.00012 41.0 8.2 49 672-720 73-126 (256)
109 cd05044 PTKc_c-ros Catalytic d 81.8 2.7 5.9E-05 43.9 5.9 47 672-718 73-129 (269)
110 cd06642 STKc_STK25-YSK1 Cataly 81.8 5.2 0.00011 42.3 8.0 48 672-719 76-125 (277)
111 PF13759 2OG-FeII_Oxy_5: Putat 81.5 4.4 9.6E-05 37.7 6.6 35 331-365 64-101 (101)
112 PF06052 3-HAO: 3-hydroxyanthr 81.4 5 0.00011 40.8 7.2 74 250-364 33-106 (151)
113 cd05036 PTKc_ALK_LTK Catalytic 81.4 5.8 0.00013 42.0 8.3 47 672-718 83-139 (277)
114 cd05034 PTKc_Src_like Catalyti 81.3 7.6 0.00017 40.4 9.0 48 672-719 75-127 (261)
115 cd05080 PTKc_Tyk2_rpt2 Catalyt 81.2 6.5 0.00014 41.7 8.6 47 672-718 82-130 (283)
116 cd06917 STKc_NAK1_like Catalyt 81.1 6.8 0.00015 41.3 8.6 50 672-721 76-127 (277)
117 cd05101 PTKc_FGFR2 Catalytic d 80.8 5.3 0.00012 43.0 7.9 47 672-718 95-160 (304)
118 cd05055 PTKc_PDGFR Catalytic d 80.7 6 0.00013 42.9 8.2 45 672-716 113-162 (302)
119 cd05076 PTK_Tyk2_rpt1 Pseudoki 80.7 7.9 0.00017 41.3 9.0 48 672-719 90-141 (274)
120 cd06620 PKc_MAPKK_Byr1_like Ca 80.5 7.8 0.00017 41.2 8.9 43 672-714 77-122 (284)
121 cd05085 PTKc_Fer Catalytic dom 80.3 7.7 0.00017 40.1 8.6 47 672-718 66-116 (250)
122 PF07883 Cupin_2: Cupin domain 80.2 2.1 4.5E-05 36.3 3.6 58 258-359 6-63 (71)
123 COG1917 Uncharacterized conser 80.2 9.2 0.0002 37.0 8.5 68 253-364 46-115 (131)
124 cd08228 STKc_Nek6 Catalytic do 80.1 8.5 0.00018 40.2 8.9 48 672-719 76-130 (267)
125 cd05048 PTKc_Ror Catalytic Dom 80.0 7.6 0.00016 41.0 8.6 48 672-719 82-148 (283)
126 COG0662 {ManC} Mannose-6-phosp 79.8 2 4.3E-05 41.9 3.7 26 333-358 75-100 (127)
127 cd07869 STKc_PFTAIRE1 Catalyti 79.6 5.9 0.00013 42.7 7.7 46 672-717 77-125 (303)
128 cd06625 STKc_MEKK3_like Cataly 79.5 9.7 0.00021 39.6 9.1 48 672-719 78-128 (263)
129 KOG0593 Predicted protein kina 79.4 2.1 4.5E-05 48.3 4.1 51 765-829 86-136 (396)
130 cd05038 PTKc_Jak_rpt2 Catalyti 79.3 8.4 0.00018 40.4 8.6 48 672-719 82-133 (284)
131 smart00219 TyrKc Tyrosine kina 79.2 6 0.00013 40.7 7.3 48 672-719 75-127 (258)
132 cd05066 PTKc_EphR_A Catalytic 79.1 8 0.00017 40.6 8.4 46 672-717 79-128 (267)
133 smart00221 STYKc Protein kinas 78.8 9.6 0.00021 38.1 8.5 49 672-720 71-123 (225)
134 PRK10359 lipopolysaccharide co 78.5 5.6 0.00012 43.1 7.0 38 672-714 117-154 (232)
135 cd06613 STKc_MAP4K3_like Catal 78.4 11 0.00024 39.1 9.0 50 672-721 74-127 (262)
136 cd05096 PTKc_DDR1 Catalytic do 78.4 7.4 0.00016 41.9 8.0 47 672-718 93-161 (304)
137 PF13013 F-box-like_2: F-box-l 78.3 3.5 7.6E-05 39.9 4.8 48 14-64 16-63 (109)
138 cd05582 STKc_RSK_N N-terminal 78.0 5.6 0.00012 43.4 7.0 47 672-718 72-121 (318)
139 cd05608 STKc_GRK1 Catalytic do 77.9 6.2 0.00013 42.1 7.2 47 672-718 67-120 (280)
140 cd06605 PKc_MAPKK Catalytic do 77.7 8.2 0.00018 40.2 7.9 45 672-716 73-122 (265)
141 cd06611 STKc_SLK_like Catalyti 77.6 7 0.00015 41.3 7.4 48 672-719 76-127 (280)
142 cd07872 STKc_PCTAIRE2 Catalyti 77.3 11 0.00025 40.7 9.1 47 672-718 78-127 (309)
143 cd05073 PTKc_Hck Catalytic dom 77.2 8.4 0.00018 40.3 7.8 48 672-719 74-126 (260)
144 cd06610 STKc_OSR1_SPAK Catalyt 77.2 11 0.00024 39.1 8.6 50 672-721 73-128 (267)
145 cd05115 PTKc_Zap-70 Catalytic 77.1 9.4 0.0002 40.1 8.2 47 672-718 68-118 (257)
146 cd06644 STKc_STK10_LOK Catalyt 77.0 9.5 0.00021 40.7 8.3 48 672-719 83-134 (292)
147 cd06649 PKc_MEK2 Catalytic dom 77.0 9.8 0.00021 41.9 8.6 43 672-714 77-122 (331)
148 cd05114 PTKc_Tec_Rlk Catalytic 77.0 12 0.00026 39.0 8.9 48 672-719 73-124 (256)
149 cd06646 STKc_MAP4K5 Catalytic 76.8 13 0.00027 39.0 9.0 49 672-720 80-131 (267)
150 cd05057 PTKc_EGFR_like Catalyt 76.7 10 0.00022 40.1 8.4 48 672-719 82-133 (279)
151 cd05046 PTK_CCK4 Pseudokinase 76.6 8.9 0.00019 40.3 7.8 47 672-718 82-140 (275)
152 KOG0592 3-phosphoinositide-dep 76.4 1.6 3.5E-05 52.1 2.4 18 812-829 192-209 (604)
153 cd05068 PTKc_Frk_like Catalyti 76.2 15 0.00033 38.3 9.4 47 672-718 75-126 (261)
154 cd05090 PTKc_Ror1 Catalytic do 76.2 11 0.00024 39.9 8.5 47 672-718 81-147 (283)
155 cd05082 PTKc_Csk Catalytic dom 75.9 12 0.00027 38.9 8.6 48 672-719 74-126 (256)
156 KOG0667 Dual-specificity tyros 75.8 1.5 3.2E-05 53.2 1.8 40 776-829 285-324 (586)
157 cd08225 STKc_Nek5 Catalytic do 75.7 12 0.00026 38.6 8.4 49 672-720 73-126 (257)
158 cd05095 PTKc_DDR2 Catalytic do 75.7 13 0.00028 39.9 9.0 48 672-719 93-154 (296)
159 COG4101 Predicted mannose-6-ph 75.7 2.8 6.1E-05 41.1 3.4 25 333-357 88-112 (142)
160 cd05065 PTKc_EphR_B Catalytic 75.7 11 0.00024 39.6 8.2 47 672-718 79-129 (269)
161 KOG0608 Warts/lats-like serine 75.4 1.8 3.9E-05 52.7 2.4 17 813-829 748-764 (1034)
162 cd08220 STKc_Nek8 Catalytic do 75.4 11 0.00024 38.9 8.0 50 672-721 73-127 (256)
163 PTZ00426 cAMP-dependent protei 75.4 8.9 0.00019 42.8 7.8 45 672-716 105-152 (340)
164 cd05147 RIO1_euk RIO kinase fa 75.4 1.3 2.8E-05 45.8 1.1 14 815-828 139-152 (190)
165 TIGR02272 gentisate_1_2 gentis 75.3 8.1 0.00018 44.2 7.4 48 332-383 119-166 (335)
166 PTZ00263 protein kinase A cata 75.2 8.3 0.00018 42.5 7.5 47 672-718 92-141 (329)
167 cd06641 STKc_MST3 Catalytic do 74.7 12 0.00026 39.6 8.3 48 673-720 77-126 (277)
168 cd05572 STKc_cGK_PKG Catalytic 74.5 15 0.00033 38.3 8.8 49 672-720 67-118 (262)
169 cd07862 STKc_CDK6 Catalytic do 74.5 17 0.00038 38.5 9.5 48 671-718 82-133 (290)
170 cd07846 STKc_CDKL2_3 Catalytic 74.3 8.8 0.00019 40.5 7.1 49 672-720 74-125 (286)
171 cd05599 STKc_NDR_like Catalyti 74.2 8 0.00017 43.0 7.1 45 672-716 75-122 (364)
172 cd05594 STKc_PKB_alpha Catalyt 73.9 11 0.00024 41.3 8.0 42 672-713 69-113 (325)
173 cd05052 PTKc_Abl Catalytic dom 73.7 17 0.00037 38.1 9.0 47 672-718 76-127 (263)
174 cd07836 STKc_Pho85 Catalytic d 73.7 15 0.00032 38.7 8.6 47 672-718 72-123 (284)
175 cd05094 PTKc_TrkC Catalytic do 73.1 14 0.00031 39.4 8.5 47 672-718 81-146 (291)
176 PLN00113 leucine-rich repeat r 73.1 15 0.00032 46.9 9.9 43 672-714 757-799 (968)
177 PF05523 FdtA: WxcM-like, C-te 73.0 11 0.00024 37.2 6.9 76 252-368 33-111 (131)
178 cd05600 STKc_Sid2p_Dbf2p Catal 72.7 11 0.00024 41.3 7.7 47 672-718 75-124 (333)
179 cd05144 RIO2_C RIO kinase fami 72.7 16 0.00035 37.4 8.3 43 673-718 106-148 (198)
180 cd05597 STKc_DMPK_like Catalyt 72.7 10 0.00022 41.8 7.4 45 672-716 75-123 (331)
181 cd08221 STKc_Nek9 Catalytic do 72.7 16 0.00035 37.8 8.5 48 672-719 73-125 (256)
182 cd05060 PTKc_Syk_like Catalyti 72.6 14 0.00031 38.4 8.1 48 672-719 69-119 (257)
183 cd07871 STKc_PCTAIRE3 Catalyti 72.4 15 0.00032 39.4 8.4 47 672-718 77-126 (288)
184 KOG3021 Predicted kinase [Gene 72.4 10 0.00022 41.5 6.8 30 673-714 83-112 (313)
185 cd05102 PTKc_VEGFR3 Catalytic 72.4 12 0.00027 40.9 7.9 26 691-716 170-195 (338)
186 cd05625 STKc_LATS1 Catalytic d 72.3 10 0.00022 42.7 7.4 46 672-717 75-123 (382)
187 cd08215 STKc_Nek Catalytic dom 72.1 14 0.00031 37.7 7.9 50 672-721 73-129 (258)
188 cd07837 STKc_CdkB_plant Cataly 72.1 15 0.00033 39.0 8.3 46 673-719 81-134 (295)
189 cd07845 STKc_CDK10 Catalytic d 72.0 19 0.00042 38.8 9.2 48 672-720 82-133 (309)
190 cd05063 PTKc_EphR_A2 Catalytic 71.7 14 0.0003 38.7 7.8 47 672-718 80-130 (268)
191 cd05077 PTK_Jak1_rpt1 Pseudoki 71.7 19 0.00042 38.0 8.9 47 672-718 78-128 (262)
192 cd05083 PTKc_Chk Catalytic dom 71.7 19 0.00042 37.4 8.8 46 673-718 73-123 (254)
193 cd05626 STKc_LATS2 Catalytic d 71.6 13 0.00029 41.9 8.1 46 672-717 75-123 (381)
194 cd07870 STKc_PFTAIRE2 Catalyti 71.6 19 0.00041 38.4 8.9 48 672-719 77-127 (291)
195 cd05041 PTKc_Fes_like Catalyti 71.5 16 0.00036 37.7 8.2 47 672-718 66-116 (251)
196 cd07848 STKc_CDKL5 Catalytic d 71.4 15 0.00032 39.0 8.0 48 672-719 74-124 (287)
197 cd07873 STKc_PCTAIRE1 Catalyti 71.2 17 0.00037 39.1 8.5 48 672-719 78-128 (301)
198 cd08218 STKc_Nek1 Catalytic do 71.1 16 0.00036 37.8 8.1 49 672-720 73-126 (256)
199 cd08229 STKc_Nek7 Catalytic do 71.0 14 0.0003 38.6 7.6 48 671-718 75-129 (267)
200 cd05049 PTKc_Trk Catalytic dom 70.8 16 0.00035 38.4 8.1 47 672-718 82-145 (280)
201 cd05629 STKc_NDR_like_fungal C 70.8 13 0.00028 41.8 7.7 46 672-717 75-123 (377)
202 cd05578 STKc_Yank1 Catalytic d 70.7 12 0.00026 38.9 7.0 50 671-720 73-125 (258)
203 cd05575 STKc_SGK Catalytic dom 70.5 14 0.0003 40.5 7.7 47 672-718 70-119 (323)
204 PRK01723 3-deoxy-D-manno-octul 70.2 2.8 6.1E-05 45.0 2.2 33 813-878 161-193 (239)
205 cd06650 PKc_MEK1 Catalytic dom 70.1 16 0.00035 40.3 8.3 42 672-713 77-121 (333)
206 cd07850 STKc_JNK Catalytic dom 69.9 15 0.00033 40.7 8.0 48 671-718 94-141 (353)
207 cd05105 PTKc_PDGFR_alpha Catal 69.7 16 0.00034 42.2 8.3 26 691-716 233-258 (400)
208 TIGR02905 spore_yutH spore coa 69.6 38 0.00083 37.9 11.1 120 672-826 80-202 (313)
209 cd05035 PTKc_Axl_like Catalyti 69.4 28 0.00061 36.3 9.5 46 672-717 81-135 (273)
210 cd05595 STKc_PKB_beta Catalyti 69.3 14 0.0003 40.6 7.5 47 672-718 69-118 (323)
211 KOG0594 Protein kinase PCTAIRE 69.3 2.6 5.7E-05 47.7 1.8 20 810-829 136-155 (323)
212 PLN00212 glutelin; Provisional 69.2 19 0.00041 43.3 8.9 73 259-369 357-429 (493)
213 cd05604 STKc_SGK3 Catalytic do 69.0 16 0.00034 40.1 7.7 45 672-716 70-117 (325)
214 cd05062 PTKc_IGF-1R Catalytic 68.9 17 0.00038 38.3 7.9 47 672-718 83-142 (277)
215 PRK13290 ectC L-ectoine syntha 68.9 7.4 0.00016 38.3 4.7 32 333-364 75-106 (125)
216 cd07876 STKc_JNK2 Catalytic do 68.8 16 0.00034 40.8 7.8 47 672-718 100-146 (359)
217 cd07861 STKc_CDK1_euk Catalyti 68.6 21 0.00045 37.7 8.4 49 672-720 73-126 (285)
218 COG0515 SPS1 Serine/threonine 68.6 12 0.00025 38.1 6.2 15 815-829 122-136 (384)
219 cd06626 STKc_MEKK4 Catalytic d 68.5 21 0.00046 37.0 8.3 49 672-720 73-124 (264)
220 cd05047 PTKc_Tie Catalytic dom 68.5 23 0.00049 37.4 8.6 45 672-716 70-133 (270)
221 cd07875 STKc_JNK1 Catalytic do 68.4 18 0.00039 40.3 8.3 47 672-718 103-149 (364)
222 cd05602 STKc_SGK1 Catalytic do 68.3 17 0.00036 39.9 7.8 45 672-716 70-117 (325)
223 cd05093 PTKc_TrkB Catalytic do 67.9 21 0.00046 38.1 8.3 47 672-718 81-143 (288)
224 PF02041 Auxin_BP: Auxin bindi 67.6 17 0.00037 37.2 6.9 71 252-358 46-116 (167)
225 cd05601 STKc_CRIK Catalytic do 67.6 12 0.00026 41.0 6.4 47 672-718 75-125 (330)
226 cd06624 STKc_ASK Catalytic dom 67.3 21 0.00046 37.4 8.1 48 672-719 79-132 (268)
227 cd06619 PKc_MKK5 Catalytic dom 67.2 23 0.0005 37.6 8.4 48 672-720 73-120 (279)
228 cd05628 STKc_NDR1 Catalytic do 67.1 18 0.00039 40.4 7.9 45 672-716 75-122 (363)
229 cd05598 STKc_LATS Catalytic do 66.9 16 0.00035 40.9 7.5 46 672-717 75-123 (376)
230 cd05113 PTKc_Btk_Bmx Catalytic 66.9 23 0.00049 37.1 8.2 47 672-718 73-123 (256)
231 cd05040 PTKc_Ack_like Catalyti 66.8 27 0.00059 36.2 8.7 48 672-719 69-121 (257)
232 cd05584 STKc_p70S6K Catalytic 66.8 17 0.00036 39.9 7.5 47 672-718 74-123 (323)
233 KOG0958 DNA damage-responsive 66.7 3.6 7.9E-05 50.2 2.4 116 249-373 172-299 (690)
234 cd05051 PTKc_DDR Catalytic dom 66.7 27 0.00059 37.1 8.9 48 672-719 93-154 (296)
235 cd05067 PTKc_Lck_Blk Catalytic 66.6 30 0.00064 36.1 9.0 48 672-719 74-126 (260)
236 cd06615 PKc_MEK Catalytic doma 66.6 23 0.00051 38.4 8.5 42 672-713 73-117 (308)
237 cd06609 STKc_MST3_like Catalyt 66.4 27 0.00058 36.8 8.7 48 672-719 73-122 (274)
238 PHA02882 putative serine/threo 66.3 3.1 6.7E-05 44.9 1.6 17 813-829 145-161 (294)
239 TIGR01221 rmlC dTDP-4-dehydror 66.2 32 0.00069 36.0 8.9 74 254-359 48-124 (176)
240 cd07838 STKc_CDK4_6_like Catal 65.7 33 0.00071 36.0 9.2 49 672-720 80-132 (287)
241 cd05145 RIO1_like RIO kinase f 65.7 3.9 8.6E-05 41.8 2.1 15 814-828 138-152 (190)
242 cd05064 PTKc_EphR_A10 Catalyti 65.5 19 0.00041 38.0 7.3 46 672-717 80-129 (266)
243 cd05606 STKc_beta_ARK Catalyti 65.5 28 0.0006 37.1 8.7 47 672-718 71-120 (278)
244 cd05577 STKc_GRK Catalytic dom 65.5 25 0.00054 37.2 8.3 48 672-719 67-119 (277)
245 cd05056 PTKc_FAK Catalytic dom 65.1 24 0.00052 37.1 7.9 46 673-718 81-130 (270)
246 cd07863 STKc_CDK4 Catalytic do 64.9 25 0.00054 37.2 8.1 48 671-718 80-131 (288)
247 cd06633 STKc_TAO3 Catalytic do 64.6 23 0.0005 38.6 8.0 47 672-718 95-144 (313)
248 cd08223 STKc_Nek4 Catalytic do 64.6 20 0.00043 37.1 7.2 47 672-718 74-125 (257)
249 KOG1165 Casein kinase (serine/ 64.3 5.3 0.00011 45.7 2.9 52 544-603 36-94 (449)
250 PHA02988 hypothetical protein; 64.3 26 0.00057 37.7 8.3 43 672-714 96-141 (283)
251 cd05119 RIO RIO kinase family, 64.3 4.1 8.8E-05 40.8 1.9 30 812-875 133-162 (187)
252 cd05116 PTKc_Syk Catalytic dom 64.2 30 0.00066 36.1 8.5 44 673-716 70-116 (257)
253 cd07832 STKc_CCRK Catalytic do 64.2 33 0.00071 36.1 8.8 46 672-718 73-122 (286)
254 cd08227 PK_STRAD_alpha Pseudok 64.0 21 0.00046 39.0 7.6 45 672-716 73-122 (327)
255 cd05603 STKc_SGK2 Catalytic do 64.0 19 0.00041 39.4 7.1 45 672-716 70-117 (321)
256 cd07847 STKc_CDKL1_4 Catalytic 63.8 10 0.00022 39.9 5.0 48 672-719 74-124 (286)
257 cd05104 PTKc_Kit Catalytic dom 63.6 21 0.00045 40.4 7.6 28 691-718 210-237 (375)
258 cd07830 STKc_MAK_like Catalyti 63.5 16 0.00035 38.5 6.3 48 672-719 72-123 (283)
259 KOG0581 Mitogen-activated prot 63.3 3.3 7.1E-05 47.5 1.1 38 815-889 200-237 (364)
260 PRK12274 serine/threonine prot 63.0 5 0.00011 43.2 2.4 33 814-879 111-144 (218)
261 cd05605 STKc_GRK4_like Catalyt 63.0 20 0.00044 38.3 7.1 46 672-717 74-124 (285)
262 cd05050 PTKc_Musk Catalytic do 62.9 23 0.00051 37.6 7.5 47 672-718 82-153 (288)
263 cd05596 STKc_ROCK Catalytic do 62.7 15 0.00033 41.4 6.3 46 672-717 117-164 (370)
264 cd05573 STKc_ROCK_NDR_like Cat 62.7 20 0.00042 39.4 7.0 47 672-718 75-124 (350)
265 PRK10359 lipopolysaccharide co 62.7 4.4 9.4E-05 44.0 1.9 17 813-829 154-170 (232)
266 cd07839 STKc_CDK5 Catalytic do 62.6 26 0.00057 37.0 7.8 48 672-719 73-123 (284)
267 cd07841 STKc_CDK7 Catalytic do 62.5 26 0.00057 37.3 7.8 47 671-718 75-125 (298)
268 KOG4341 F-box protein containi 62.3 5.5 0.00012 46.7 2.6 48 22-69 73-120 (483)
269 cd07835 STKc_CDK1_like Catalyt 62.0 37 0.00081 35.8 8.8 47 672-719 72-123 (283)
270 KOG1152 Signal transduction se 61.6 5.2 0.00011 48.5 2.4 20 810-829 686-705 (772)
271 KOG0032 Ca2+/calmodulin-depend 61.5 22 0.00049 41.2 7.5 43 673-715 111-155 (382)
272 PTZ00024 cyclin-dependent prot 61.5 35 0.00077 37.3 8.7 47 672-718 94-142 (335)
273 cd05086 PTKc_Aatyk2 Catalytic 61.3 39 0.00084 35.7 8.7 48 671-718 68-122 (268)
274 cd05099 PTKc_FGFR4 Catalytic d 61.1 29 0.00062 37.7 7.9 47 672-718 92-157 (314)
275 cd05579 STKc_MAST_like Catalyt 60.9 13 0.00028 38.3 4.9 50 672-721 67-119 (265)
276 PLN00034 mitogen-activated pro 60.5 23 0.0005 39.4 7.2 44 672-716 146-189 (353)
277 cd05032 PTKc_InsR_like Catalyt 60.4 32 0.00068 36.1 7.9 48 672-719 83-143 (277)
278 cd06635 STKc_TAO1 Catalytic do 60.4 28 0.00061 37.9 7.7 47 672-718 99-148 (317)
279 KOG0671 LAMMER dual specificit 60.3 7.8 0.00017 44.9 3.4 19 813-831 211-229 (415)
280 cd08216 PK_STRAD Pseudokinase 60.0 24 0.00053 38.0 7.1 49 671-719 72-125 (314)
281 cd07840 STKc_CDK9_like Catalyt 59.7 34 0.00073 35.9 7.9 47 672-719 74-124 (287)
282 cd05607 STKc_GRK7 Catalytic do 59.6 28 0.00061 37.1 7.4 47 672-718 67-118 (277)
283 KOG0658 Glycogen synthase kina 59.5 5.1 0.00011 45.9 1.8 19 813-831 144-162 (364)
284 cd07844 STKc_PCTAIRE_like Cata 59.2 35 0.00075 36.3 8.0 46 672-718 77-126 (291)
285 KOG0983 Mitogen-activated prot 59.0 15 0.00032 41.4 5.0 54 764-830 174-228 (391)
286 cd05106 PTKc_CSF-1R Catalytic 58.5 24 0.00052 40.0 6.9 28 691-718 208-235 (374)
287 cd07874 STKc_JNK3 Catalytic do 58.4 26 0.00055 38.9 7.1 47 672-718 96-142 (355)
288 cd05589 STKc_PKN Catalytic dom 58.4 27 0.00058 38.3 7.1 47 672-718 76-124 (324)
289 COG0510 ycfN Thiamine kinase a 58.0 21 0.00045 39.4 6.1 36 813-881 153-188 (269)
290 cd05630 STKc_GRK6 Catalytic do 58.0 32 0.00069 36.9 7.5 47 672-718 74-125 (285)
291 cd07859 STKc_TDY_MAPK_plant Ca 57.8 33 0.00071 37.3 7.6 46 673-718 79-126 (338)
292 cd05042 PTKc_Aatyk Catalytic d 57.6 50 0.0011 34.6 8.8 48 671-718 68-123 (269)
293 cd05632 STKc_GRK5 Catalytic do 57.6 30 0.00064 37.1 7.2 47 672-718 74-125 (285)
294 cd07855 STKc_ERK5 Catalytic do 57.3 29 0.00062 38.2 7.1 47 671-718 81-130 (334)
295 cd06632 STKc_MEKK1_plant Catal 57.3 19 0.0004 37.2 5.4 49 673-721 77-128 (258)
296 PTZ00267 NIMA-related protein 57.3 35 0.00076 40.1 8.3 45 672-716 139-190 (478)
297 KOG3087 Serine/threonine prote 56.4 8.2 0.00018 41.3 2.5 18 812-829 131-148 (229)
298 smart00220 S_TKc Serine/Threon 56.2 33 0.00071 34.4 6.8 50 672-721 61-113 (244)
299 cd05144 RIO2_C RIO kinase fami 56.1 7.3 0.00016 39.8 2.2 17 813-829 144-160 (198)
300 cd06638 STKc_myosinIIIA Cataly 56.1 18 0.00038 38.3 5.1 48 672-719 94-148 (286)
301 cd05111 PTK_HER3 Pseudokinase 56.1 41 0.00088 35.8 7.9 45 672-716 82-130 (279)
302 cd06652 STKc_MEKK2 Catalytic d 55.4 17 0.00037 38.0 4.8 49 671-719 79-130 (265)
303 cd05089 PTKc_Tie1 Catalytic do 55.2 48 0.001 35.6 8.3 47 672-718 77-142 (297)
304 cd05078 PTK_Jak2_Jak3_rpt1 Pse 55.1 20 0.00044 37.5 5.3 48 672-719 73-124 (258)
305 cd05037 PTK_Jak_rpt1 Pseudokin 54.9 21 0.00045 37.0 5.3 48 672-719 74-125 (259)
306 KOG1290 Serine/threonine prote 54.6 5.5 0.00012 47.4 1.0 20 811-830 205-224 (590)
307 cd05071 PTKc_Src Catalytic dom 54.5 24 0.00051 37.2 5.7 47 673-719 75-126 (262)
308 KOG4408 Putative Mg2+ and Co2+ 54.4 1.9 4.2E-05 48.7 -2.5 49 21-69 8-56 (386)
309 cd07849 STKc_ERK1_2_like Catal 54.0 40 0.00087 37.0 7.6 47 673-719 83-130 (336)
310 cd07856 STKc_Sty1_Hog1 Catalyt 53.7 55 0.0012 36.1 8.7 46 672-718 84-131 (328)
311 cd08222 STKc_Nek11 Catalytic d 53.6 23 0.0005 36.9 5.4 50 672-721 76-132 (260)
312 PRK09943 DNA-binding transcrip 53.6 18 0.00039 37.2 4.5 29 333-361 146-174 (185)
313 cd06608 STKc_myosinIII_like Ca 53.3 20 0.00043 37.3 4.8 49 672-720 83-138 (275)
314 cd05100 PTKc_FGFR3 Catalytic d 52.8 50 0.0011 36.3 8.1 46 673-718 93-157 (334)
315 cd05087 PTKc_Aatyk1_Aatyk3 Cat 52.8 62 0.0014 34.0 8.5 47 672-718 69-123 (269)
316 cd05107 PTKc_PDGFR_beta Cataly 52.6 57 0.0012 37.7 8.8 30 690-719 234-263 (401)
317 cd05092 PTKc_TrkA Catalytic do 52.5 61 0.0013 34.4 8.5 48 672-719 81-146 (280)
318 KOG0984 Mitogen-activated prot 52.4 17 0.00036 39.6 4.0 44 773-829 141-184 (282)
319 smart00090 RIO RIO-like kinase 52.3 8.9 0.00019 41.2 2.1 34 815-882 170-204 (237)
320 cd07842 STKc_CDK8_like Catalyt 52.3 53 0.0012 35.2 8.1 48 672-719 78-132 (316)
321 PF01050 MannoseP_isomer: Mann 52.3 16 0.00035 37.2 3.8 26 333-358 102-127 (151)
322 cd05580 STKc_PKA Catalytic dom 52.2 20 0.00043 38.3 4.8 47 672-718 75-124 (290)
323 cd05123 STKc_AGC Catalytic dom 52.0 27 0.00058 35.9 5.5 50 670-719 65-117 (250)
324 PRK14705 glycogen branching en 52.0 42 0.0009 44.7 8.3 51 545-603 154-208 (1224)
325 cd05054 PTKc_VEGFR Catalytic d 51.8 55 0.0012 36.4 8.3 29 691-719 169-197 (337)
326 PLN03215 ascorbic acid mannose 51.7 16 0.00034 42.5 4.1 36 19-54 2-38 (373)
327 cd06636 STKc_MAP4K4_6 Catalyti 51.5 24 0.00051 37.4 5.1 49 670-718 91-144 (282)
328 PHA03209 serine/threonine kina 51.2 61 0.0013 36.3 8.6 45 672-716 131-178 (357)
329 PLN00009 cyclin-dependent kina 51.0 56 0.0012 34.8 7.9 47 672-718 75-125 (294)
330 PHA03211 serine/threonine kina 50.9 57 0.0012 38.7 8.6 45 672-716 234-281 (461)
331 cd05069 PTKc_Yes Catalytic dom 50.7 24 0.00053 36.9 5.0 47 672-718 74-125 (260)
332 cd05610 STKc_MASTL Catalytic d 50.6 40 0.00086 41.8 7.6 44 672-715 78-124 (669)
333 cd05145 RIO1_like RIO kinase f 50.5 22 0.00048 36.4 4.6 41 673-713 92-135 (190)
334 cd05576 STKc_RPK118_like Catal 50.2 23 0.00049 36.8 4.7 47 672-718 59-108 (237)
335 cd05045 PTKc_RET Catalytic dom 50.0 66 0.0014 34.3 8.3 46 673-718 78-150 (290)
336 cd05070 PTKc_Fyn_Yrk Catalytic 49.8 27 0.00059 36.4 5.2 47 673-719 75-126 (260)
337 cd06639 STKc_myosinIIIB Cataly 49.5 27 0.00059 37.2 5.3 49 672-720 98-153 (291)
338 KOG0615 Serine/threonine prote 49.5 9.9 0.00022 44.5 2.0 16 814-829 296-311 (475)
339 cd05588 STKc_aPKC Catalytic do 49.5 24 0.00052 38.9 5.0 47 671-717 69-118 (329)
340 PRK09188 serine/threonine prot 49.3 11 0.00024 43.5 2.3 17 813-829 130-147 (365)
341 cd06631 STKc_YSK4 Catalytic do 49.3 28 0.00061 36.3 5.3 50 671-720 75-127 (265)
342 cd06612 STKc_MST1_2 Catalytic 49.0 28 0.00061 35.9 5.1 50 672-721 72-125 (256)
343 TIGR01479 GMP_PMI mannose-1-ph 48.9 45 0.00098 39.7 7.4 26 333-358 415-440 (468)
344 cd07868 STKc_CDK8 Catalytic do 48.9 73 0.0016 34.4 8.5 46 672-717 74-130 (317)
345 cd05147 RIO1_euk RIO kinase fa 48.8 24 0.00051 36.6 4.5 41 674-714 93-137 (190)
346 cd06645 STKc_MAP4K3 Catalytic 48.7 28 0.0006 36.4 5.1 48 672-719 80-130 (267)
347 cd05103 PTKc_VEGFR2 Catalytic 48.4 61 0.0013 35.9 8.0 28 691-718 175-202 (343)
348 TIGR03214 ura-cupin putative a 48.4 19 0.00041 39.6 3.9 26 333-358 218-243 (260)
349 cd05590 STKc_nPKC_eta Catalyti 48.4 22 0.00048 39.0 4.5 46 672-717 70-118 (320)
350 cd05039 PTKc_Csk_like Catalyti 48.4 31 0.00067 35.8 5.3 48 672-719 74-126 (256)
351 COG3642 Mn2+-dependent serine/ 48.3 13 0.00027 39.7 2.4 24 815-872 113-136 (204)
352 cd05043 PTK_Ryk Pseudokinase d 48.3 82 0.0018 33.2 8.6 47 672-718 83-140 (280)
353 cd05148 PTKc_Srm_Brk Catalytic 48.1 27 0.00059 36.3 4.9 46 673-718 77-127 (261)
354 cd05621 STKc_ROCK2 Catalytic d 48.1 23 0.0005 40.1 4.6 47 672-718 117-165 (370)
355 cd07860 STKc_CDK2_3 Catalytic 48.1 71 0.0015 33.7 8.1 46 673-719 74-124 (284)
356 PHA03390 pk1 serine/threonine- 48.1 27 0.00058 37.1 4.9 46 672-717 83-131 (267)
357 cd06655 STKc_PAK2 Catalytic do 48.0 30 0.00065 37.4 5.4 47 673-719 91-139 (296)
358 cd06606 STKc_MAPKKK Catalytic 48.0 33 0.00071 34.9 5.4 50 672-721 75-127 (260)
359 cd07878 STKc_p38beta_MAPK11 Ca 47.8 46 0.00099 36.7 6.9 46 672-718 94-141 (343)
360 PHA03207 serine/threonine kina 47.6 66 0.0014 36.6 8.2 46 672-717 160-207 (392)
361 cd06654 STKc_PAK1 Catalytic do 47.4 28 0.00062 37.5 5.1 49 672-720 91-141 (296)
362 cd06653 STKc_MEKK3_like_1 Cata 47.2 88 0.0019 32.7 8.6 48 672-719 80-130 (264)
363 cd05594 STKc_PKB_alpha Catalyt 47.2 12 0.00027 41.0 2.2 17 813-829 115-131 (325)
364 cd05109 PTKc_HER2 Catalytic do 47.1 90 0.002 33.0 8.7 47 673-719 83-133 (279)
365 cd05617 STKc_aPKC_zeta Catalyt 47.1 26 0.00057 38.5 4.8 46 672-717 70-118 (327)
366 cd06628 STKc_MAPKKK_Byr2_like 46.9 33 0.00072 35.8 5.3 49 672-720 80-131 (267)
367 cd06658 STKc_PAK5 Catalytic do 46.7 26 0.00057 37.7 4.7 46 673-718 94-141 (292)
368 PHA03212 serine/threonine kina 46.7 9.4 0.0002 43.7 1.3 16 814-829 202-217 (391)
369 cd05072 PTKc_Lyn Catalytic dom 46.5 30 0.00066 36.0 5.0 47 672-718 75-126 (261)
370 cd05612 STKc_PRKX_like Catalyt 46.3 27 0.0006 37.5 4.7 47 672-718 75-124 (291)
371 PTZ00267 NIMA-related protein 46.0 11 0.00024 44.3 1.7 18 812-829 187-204 (478)
372 PF05899 Cupin_3: Protein of u 45.9 13 0.00027 33.1 1.7 18 333-350 44-61 (74)
373 cd05615 STKc_cPKC_alpha Cataly 45.8 26 0.00056 38.5 4.5 45 672-716 75-122 (323)
374 cd05109 PTKc_HER2 Catalytic do 45.8 12 0.00025 39.7 1.7 17 813-829 128-144 (279)
375 PF00069 Pkinase: Protein kina 45.7 11 0.00025 38.8 1.6 41 672-712 72-115 (260)
376 KOG1006 Mitogen-activated prot 45.6 12 0.00025 42.0 1.7 42 776-830 163-204 (361)
377 cd08530 STKc_CNK2-like Catalyt 45.5 31 0.00067 35.5 4.8 48 672-719 73-127 (256)
378 cd05587 STKc_cPKC Catalytic do 45.2 9.8 0.00021 41.7 1.1 16 814-829 121-136 (324)
379 cd06659 STKc_PAK6 Catalytic do 44.8 31 0.00068 37.2 4.9 47 672-718 92-140 (297)
380 cd05622 STKc_ROCK1 Catalytic d 44.6 28 0.00061 39.4 4.7 46 672-717 117-164 (371)
381 cd05602 STKc_SGK1 Catalytic do 44.5 9.8 0.00021 41.7 1.0 17 813-829 115-131 (325)
382 cd07831 STKc_MOK Catalytic dom 44.5 33 0.00071 36.0 4.9 50 672-721 74-126 (282)
383 cd05118 STKc_CMGC Catalytic do 44.5 30 0.00066 36.2 4.6 49 672-720 72-123 (283)
384 cd06643 STKc_SLK Catalytic dom 44.3 34 0.00074 36.2 5.0 48 672-719 76-127 (282)
385 cd05633 STKc_GRK3 Catalytic do 44.2 31 0.00068 36.8 4.8 47 672-718 71-120 (279)
386 cd06630 STKc_MEKK1 Catalytic d 44.2 32 0.00069 35.8 4.7 50 672-721 77-129 (268)
387 PRK10345 hypothetical protein; 44.2 14 0.00031 39.2 2.0 56 540-599 6-67 (210)
388 KOG0192 Tyrosine kinase specif 44.2 17 0.00037 41.8 2.9 40 792-872 150-189 (362)
389 cd05570 STKc_PKC Catalytic dom 44.0 31 0.00068 37.7 4.8 47 672-718 70-119 (318)
390 cd07853 STKc_NLK Catalytic dom 43.9 62 0.0014 36.2 7.2 47 672-718 78-126 (372)
391 PTZ00266 NIMA-related protein 43.7 61 0.0013 42.4 7.8 43 672-714 88-137 (1021)
392 KOG0605 NDR and related serine 43.7 12 0.00026 45.0 1.5 25 815-872 262-286 (550)
393 COG1898 RfbC dTDP-4-dehydrorha 43.6 1.4E+02 0.0031 31.3 9.1 78 253-362 48-127 (173)
394 cd05614 STKc_MSK2_N N-terminal 43.6 32 0.00069 37.7 4.8 46 672-717 79-127 (332)
395 cd05585 STKc_YPK1_like Catalyt 43.6 31 0.00068 37.5 4.7 46 672-717 67-115 (312)
396 cd05581 STKc_PDK1 Catalytic do 43.5 35 0.00076 35.6 4.9 48 672-719 76-126 (280)
397 cd05614 STKc_MSK2_N N-terminal 43.3 10 0.00022 41.5 0.9 17 813-829 124-140 (332)
398 cd05593 STKc_PKB_gamma Catalyt 43.1 34 0.00074 37.8 4.9 45 672-716 69-116 (328)
399 PHA03212 serine/threonine kina 43.0 93 0.002 35.7 8.6 45 672-716 157-203 (391)
400 PTZ00036 glycogen synthase kin 42.9 12 0.00026 43.6 1.3 16 814-829 190-205 (440)
401 PTZ00284 protein kinase; Provi 42.9 12 0.00027 43.5 1.5 17 813-829 251-267 (467)
402 cd06656 STKc_PAK3 Catalytic do 42.7 39 0.00084 36.5 5.2 48 673-720 91-140 (297)
403 cd08217 STKc_Nek2 Catalytic do 42.7 31 0.00067 35.5 4.3 42 673-714 76-124 (265)
404 PF09313 DUF1971: Domain of un 42.5 1.3E+02 0.0028 27.8 7.7 56 271-362 24-79 (82)
405 cd05571 STKc_PKB Catalytic dom 42.5 12 0.00026 41.1 1.2 16 814-829 115-130 (323)
406 cd05628 STKc_NDR1 Catalytic do 42.4 12 0.00025 42.0 1.2 17 813-829 120-136 (363)
407 KOG0610 Putative serine/threon 42.4 50 0.0011 39.0 6.1 46 669-714 148-198 (459)
408 cd05586 STKc_Sck1_like Catalyt 42.3 11 0.00025 41.2 1.1 16 814-829 116-131 (330)
409 cd05598 STKc_LATS Catalytic do 42.3 12 0.00026 42.0 1.2 17 813-829 120-136 (376)
410 cd05586 STKc_Sck1_like Catalyt 42.3 32 0.00069 37.7 4.5 45 672-716 70-117 (330)
411 cd05620 STKc_nPKC_delta Cataly 42.3 33 0.00072 37.6 4.6 47 672-718 70-119 (316)
412 PRK04750 ubiB putative ubiquin 42.1 16 0.00034 44.4 2.2 16 814-829 280-295 (537)
413 KOG0598 Ribosomal protein S6 k 42.0 13 0.00028 42.8 1.4 17 813-829 144-160 (357)
414 cd06647 STKc_PAK_I Catalytic d 41.9 37 0.0008 36.6 4.9 49 672-720 90-140 (293)
415 cd07867 STKc_CDC2L6 Catalytic 41.9 13 0.00028 40.0 1.4 16 814-829 128-143 (317)
416 PF00069 Pkinase: Protein kina 41.7 34 0.00074 35.3 4.4 10 556-565 26-35 (260)
417 cd05625 STKc_LATS1 Catalytic d 41.5 12 0.00026 42.1 1.1 17 813-829 120-136 (382)
418 cd05624 STKc_MRCK_beta Catalyt 41.4 37 0.00081 37.4 4.9 47 672-718 75-125 (331)
419 cd06637 STKc_TNIK Catalytic do 41.3 40 0.00086 35.3 4.9 48 672-719 83-135 (272)
420 cd06648 STKc_PAK_II Catalytic 41.3 38 0.00081 36.3 4.8 47 672-718 90-138 (285)
421 cd05609 STKc_MAST Catalytic do 41.1 39 0.00084 36.5 4.9 47 672-718 75-124 (305)
422 cd08224 STKc_Nek6_Nek7 Catalyt 40.7 42 0.00092 34.8 5.0 48 672-719 76-130 (267)
423 cd05112 PTKc_Itk Catalytic dom 40.6 41 0.00088 34.8 4.8 46 673-718 74-123 (256)
424 KOG0612 Rho-associated, coiled 40.6 15 0.00033 47.7 1.9 18 812-829 193-210 (1317)
425 PRK13184 pknD serine/threonine 40.6 87 0.0019 40.7 8.5 45 672-716 76-134 (932)
426 KOG0032 Ca2+/calmodulin-depend 40.5 13 0.00028 43.1 1.2 50 810-888 151-201 (382)
427 PHA03210 serine/threonine kina 40.5 12 0.00027 44.3 1.1 16 814-829 287-302 (501)
428 cd05587 STKc_cPKC Catalytic do 40.1 38 0.00082 37.1 4.7 47 672-718 75-124 (324)
429 cd05627 STKc_NDR2 Catalytic do 40.1 38 0.00082 37.8 4.8 46 672-717 75-123 (360)
430 cd05590 STKc_nPKC_eta Catalyti 39.9 13 0.00029 40.7 1.1 17 813-829 115-131 (320)
431 cd05585 STKc_YPK1_like Catalyt 39.9 14 0.00029 40.4 1.2 17 813-829 112-128 (312)
432 cd05053 PTKc_FGFR Catalytic do 39.8 43 0.00093 35.6 5.0 46 673-718 91-155 (293)
433 cd07862 STKc_CDK6 Catalytic do 39.7 12 0.00027 39.7 0.8 17 813-829 129-145 (290)
434 cd07843 STKc_CDC2L1 Catalytic 39.7 35 0.00075 36.4 4.2 48 671-719 79-130 (293)
435 cd05616 STKc_cPKC_beta Catalyt 39.7 38 0.00083 37.0 4.7 45 672-716 75-122 (323)
436 PF02311 AraC_binding: AraC-li 39.7 43 0.00093 30.9 4.4 26 333-358 41-66 (136)
437 PHA03209 serine/threonine kina 39.6 13 0.00028 41.6 1.0 17 813-829 176-192 (357)
438 cd07868 STKc_CDK8 Catalytic do 39.4 15 0.00033 39.6 1.5 17 813-829 127-143 (317)
439 cd05592 STKc_nPKC_theta_delta 39.4 39 0.00084 37.0 4.6 47 672-718 70-119 (316)
440 PLN03225 Serine/threonine-prot 39.4 15 0.00033 44.6 1.5 17 813-829 274-290 (566)
441 KOG1989 ARK protein kinase fam 39.4 18 0.00039 45.4 2.2 73 810-882 162-244 (738)
442 cd07833 STKc_CDKL Catalytic do 39.4 45 0.00097 35.2 4.9 47 673-719 75-124 (288)
443 cd07867 STKc_CDC2L6 Catalytic 39.3 1.1E+02 0.0023 33.1 7.9 47 672-718 74-131 (317)
444 cd05075 PTKc_Axl Catalytic dom 39.1 16 0.00034 38.3 1.5 29 815-876 133-161 (272)
445 KOG2345 Serine/threonine prote 38.9 21 0.00045 39.7 2.3 19 811-829 146-164 (302)
446 KOG0595 Serine/threonine-prote 38.6 21 0.00045 41.8 2.4 31 815-872 130-160 (429)
447 cd05591 STKc_nPKC_epsilon Cata 38.6 42 0.00092 36.7 4.8 46 672-717 70-118 (321)
448 cd05096 PTKc_DDR1 Catalytic do 38.4 15 0.00032 39.6 1.2 17 813-829 157-173 (304)
449 KOG4250 TANK binding protein k 38.3 24 0.00051 43.9 2.9 32 815-875 141-172 (732)
450 cd05619 STKc_nPKC_theta Cataly 38.2 44 0.00095 36.7 4.8 47 672-718 70-119 (316)
451 cd05621 STKc_ROCK2 Catalytic d 38.1 15 0.00032 41.6 1.2 17 813-829 161-177 (370)
452 cd08226 PK_STRAD_beta Pseudoki 38.1 82 0.0018 34.5 6.9 45 672-716 73-122 (328)
453 cd05620 STKc_nPKC_delta Cataly 38.0 14 0.0003 40.5 0.9 16 814-829 116-131 (316)
454 cd07875 STKc_JNK1 Catalytic do 38.0 15 0.00032 41.0 1.1 17 813-829 145-161 (364)
455 PTZ00036 glycogen synthase kin 37.9 1.1E+02 0.0024 35.7 8.3 46 671-716 140-191 (440)
456 cd05631 STKc_GRK4 Catalytic do 37.7 16 0.00035 39.1 1.3 16 814-829 122-137 (285)
457 PTZ00284 protein kinase; Provi 37.6 1.3E+02 0.0027 35.3 8.7 42 672-713 206-249 (467)
458 KOG1187 Serine/threonine prote 37.6 22 0.00048 40.8 2.4 20 810-829 193-212 (361)
459 cd05074 PTKc_Tyro3 Catalytic d 37.3 1.9E+02 0.0042 30.1 9.3 47 672-718 81-136 (273)
460 cd08528 STKc_Nek10 Catalytic d 37.0 51 0.0011 34.5 4.9 42 672-713 83-131 (269)
461 cd05102 PTKc_VEGFR3 Catalytic 36.9 20 0.00044 39.3 1.9 19 672-690 86-104 (338)
462 cd06629 STKc_MAPKKK_Bck1_like 36.9 56 0.0012 34.3 5.2 48 672-719 82-132 (272)
463 cd05604 STKc_SGK3 Catalytic do 36.7 18 0.00039 39.7 1.5 17 813-829 115-131 (325)
464 cd07869 STKc_PFTAIRE1 Catalyti 36.7 15 0.00032 39.7 0.8 17 813-829 122-138 (303)
465 cd05571 STKc_PKB Catalytic dom 36.7 48 0.0011 36.3 4.9 46 672-717 69-117 (323)
466 cd05089 PTKc_Tie1 Catalytic do 36.7 18 0.00039 38.8 1.5 17 813-829 138-154 (297)
467 cd05601 STKc_CRIK Catalytic do 36.4 17 0.00038 39.7 1.3 17 813-829 121-137 (330)
468 cd05068 PTKc_Frk_like Catalyti 36.3 21 0.00044 37.4 1.8 17 813-829 122-138 (261)
469 cd05618 STKc_aPKC_iota Catalyt 36.3 47 0.001 36.6 4.7 45 672-716 70-117 (329)
470 cd05575 STKc_SGK Catalytic dom 36.3 17 0.00036 39.9 1.1 16 814-829 116-131 (323)
471 cd05146 RIO3_euk RIO kinase fa 36.2 1E+02 0.0022 32.8 6.9 42 673-714 99-144 (197)
472 cd05591 STKc_nPKC_epsilon Cata 36.2 16 0.00035 40.0 1.0 17 813-829 115-131 (321)
473 cd05626 STKc_LATS2 Catalytic d 36.0 17 0.00036 41.1 1.2 17 813-829 120-136 (381)
474 KOG0584 Serine/threonine prote 36.0 22 0.00049 43.5 2.2 22 810-831 161-182 (632)
475 COG3450 Predicted enzyme of th 36.0 28 0.0006 34.2 2.5 26 333-358 82-107 (116)
476 COG1482 ManA Phosphomannose is 35.9 37 0.00079 38.7 3.7 30 334-364 159-188 (312)
477 cd05600 STKc_Sid2p_Dbf2p Catal 35.9 14 0.00031 40.5 0.6 16 814-829 121-136 (333)
478 PRK15131 mannose-6-phosphate i 35.9 37 0.00081 39.6 3.9 31 333-364 237-267 (389)
479 cd07876 STKc_JNK2 Catalytic do 35.8 14 0.00031 41.0 0.6 17 813-829 142-158 (359)
480 cd05108 PTKc_EGFR Catalytic do 35.8 19 0.00042 39.1 1.6 25 815-872 130-154 (316)
481 TIGR01982 UbiB 2-polyprenylphe 35.7 25 0.00054 41.4 2.5 16 814-829 277-292 (437)
482 cd07865 STKc_CDK9 Catalytic do 35.7 45 0.00099 35.5 4.3 48 671-718 92-142 (310)
483 cd05593 STKc_PKB_gamma Catalyt 35.6 17 0.00037 40.1 1.1 16 814-829 115-130 (328)
484 cd05573 STKc_ROCK_NDR_like Cat 35.6 16 0.00035 40.1 0.9 17 813-829 120-136 (350)
485 cd05603 STKc_SGK2 Catalytic do 35.5 17 0.00036 39.8 1.0 17 813-829 115-131 (321)
486 PF01163 RIO1: RIO1 family; I 35.4 29 0.00062 36.4 2.7 18 812-829 125-142 (188)
487 cd05623 STKc_MRCK_alpha Cataly 35.4 53 0.0011 36.2 4.9 45 672-716 75-123 (332)
488 cd05631 STKc_GRK4 Catalytic do 35.3 54 0.0012 35.1 4.8 47 672-718 74-125 (285)
489 cd05612 STKc_PRKX_like Catalyt 35.3 18 0.0004 38.9 1.3 17 813-829 120-136 (291)
490 PF00908 dTDP_sugar_isom: dTDP 35.3 60 0.0013 33.9 5.0 34 331-364 94-129 (176)
491 cd05111 PTK_HER3 Pseudokinase 35.3 23 0.00049 37.8 1.9 17 813-829 128-144 (279)
492 cd07872 STKc_PCTAIRE2 Catalyti 35.3 16 0.00034 39.6 0.8 17 813-829 123-139 (309)
493 cd05599 STKc_NDR_like Catalyti 35.1 17 0.00037 40.4 1.0 17 813-829 120-136 (364)
494 cd06651 STKc_MEKK3 Catalytic d 35.1 63 0.0014 33.9 5.2 49 671-719 79-130 (266)
495 PF09372 PRANC: PRANC domain; 34.9 36 0.00079 31.6 3.0 26 19-44 70-95 (97)
496 cd05627 STKc_NDR2 Catalytic do 34.8 18 0.00038 40.4 1.1 18 812-829 119-136 (360)
497 cd07874 STKc_JNK3 Catalytic do 34.7 17 0.00037 40.2 1.0 17 813-829 138-154 (355)
498 KOG0585 Ca2+/calmodulin-depend 34.4 23 0.00051 42.3 2.0 15 815-829 231-245 (576)
499 PRK15457 ethanolamine utilizat 34.3 52 0.0011 36.0 4.4 25 333-357 193-217 (233)
500 cd07871 STKc_PCTAIRE3 Catalyti 34.2 15 0.00033 39.4 0.4 17 813-829 122-138 (288)
No 1
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-74 Score=603.30 Aligned_cols=395 Identities=44% Similarity=0.786 Sum_probs=352.2
Q ss_pred HhHHHHHHccChhhHHHHHHhhcCCCccccCccceeecccCCCCCccccccccccccCCCCcccccccccccccccCCCc
Q 002526 47 VSSVMYIFCNEEPLWMSLCLKKASGVLQYKGSWKKTALHLEDPPIEYDESCTRLLHFDGFYSPFLYRRYYRCHTVLDGFS 126 (912)
Q Consensus 47 vsR~fY~~~~ddeLWr~l~l~~~~~~~~~~gSWR~Tyl~~~~l~~~~~~~~~~~~~~~~~~Sd~Lyr~~~~~~~~L~~~~ 126 (912)
||..+|.+|+++.+||.+|++...+.+.+. +||.+|.+|+||...+.+++
T Consensus 1 vs~~~y~~~n~~~~kr~~~~kr~arpel~~------------------------------~~~w~~~~y~e~f~~~~~~~ 50 (407)
T KOG2130|consen 1 VSSSMYILCNHEPLKRSLELKRKARPELYK------------------------------MSDWLYKRYYESFTLLDPFF 50 (407)
T ss_pred CccceeeecCcchHHHHHHHHHhcChhhhh------------------------------hhhHHHHHHHHhccccCccc
Confidence 467899999999999999999877665432 58999999999999999999
Q ss_pred cCCCCccccCCCCHHHHHHHh--ccCCcccccccCCCccccCCcHHHHHHHhCCeeEEEEecC-CceEEeeHHHHHHHHh
Q 002526 127 FDSQLVKRKKIVTREEFDREC--AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRISQRS-VRSISMKFKDYVAYMN 203 (912)
Q Consensus 127 ~~~~~IeRv~~LS~eeF~e~y--~nkPVIItG~~~~WPA~~kWT~dyL~e~~GD~~V~V~~~s-~~~~~mtf~dFldyl~ 203 (912)
++..+++|..++|.+||.++| +++||||+|++.+|||.++||.|+|.++||+++|.+.+.. +..++|+|+.|++||+
T Consensus 51 ~dn~~r~~~~~isveeF~~~ferp~kPVll~g~~DgW~A~ekWT~drLskkyrnq~Fkcged~~gnsv~MKmkyY~~Ym~ 130 (407)
T KOG2130|consen 51 FDNGNRERRRNISVEEFIERFERPYKPVLLSGLTDGWPASEKWTLDRLSKKYRNQKFKCGEDNNGNSVKMKMKYYIEYMK 130 (407)
T ss_pred cccchhhhhcCCCHHHHHHHhcccCCceEeeccccCCchhhhhhHHHHHHHhcCccccccccCCCcceeeeHHHHHHHHh
Confidence 999999999999999999999 9999999999999999999999999999999999998765 6789999999999999
Q ss_pred hcCCCCCeEEeccccccchh--hhhhccCCCCccccchhcccCCCCCCCcceEEecCCCCCCccccCCCCCcccEEEEEe
Q 002526 204 VQHDEDPLYIFDYKFGENAQ--GLLEDYRVPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCG 281 (912)
Q Consensus 204 ~~~de~plYLfD~~f~e~~P--~L~~Dy~vP~~F~eDlf~~L~~~~RPd~rwL~IGp~GSgTplH~Dp~~TsawnaqI~G 281 (912)
.+.+++|||+||..|+++.| .|.+||.||.||.+|+|.+++...||+|||++|||++|||.+|+||.+|+|||++|+|
T Consensus 131 ~~RddsPLYiFDssFgE~~~~rkLl~dY~VPk~F~dDlF~y~g~e~RPpyRWfvmGParSGtsiHIDPlgTSAWNtll~G 210 (407)
T KOG2130|consen 131 STRDDSPLYIFDSSFGEHAPRRKLLEDYSVPKYFRDDLFQYLGEERRPPYRWFVMGPARSGTSIHIDPLGTSAWNTLLQG 210 (407)
T ss_pred ccccCCCeEEecchhhcccchhhhhhhcCcchhhhHHHHHhcCcccCCCceeEEecCCCCCceeEECCcchHHHHHHhhc
Confidence 99999999999999999999 8999999999999999999998889999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCCCcceeeecCCCCCccCCCCcch-hhhhhcC-----CCCCCCCCCEEEEEcCCCEEEeCCCCceeeEe
Q 002526 282 RKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSL-EWWLDFY-----PLLADDDKPIECTQLPGETIVVPSGWWHCILN 355 (912)
Q Consensus 282 rKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsl-eW~l~~y-----P~l~~a~~~~E~vLePGDvLFVPsGWWHqV~N 355 (912)
+|||.||||+..|.++.+++++. + ..|+++ .||...| |.+....+|+||+|.|||+||||+||||.|.|
T Consensus 211 hKrW~LfPp~~p~~lvkv~~~e~-g----~~~de~itwf~~~y~rt~~Pswp~E~kPIEc~q~pGEt~fVP~GWWHvVlN 285 (407)
T KOG2130|consen 211 HKRWVLFPPGTPPELVKVTVDEG-G----KQPDEIITWFSTIYPRTQLPSWPDEYKPIECLQKPGETMFVPSGWWHVVLN 285 (407)
T ss_pred cceeEEcCCCCCCCceeeccccc-C----CCCcceechhhhccccccCCCCccccCCceeeecCCceEEecCCeEEEEec
Confidence 99999999999998886554322 2 345543 6775554 55555578999999999999999999999999
Q ss_pred CCCcEEEeecccCCCCHHHHHHhhccCcccccchhhhhhcccchhhccccCccCCCC-CCCCcchhhHHHHHHhhhccCc
Q 002526 356 LETTIAVTQNFVDSKNFEFVCLDFAPGYRHKGVCRAGLLALEEESLEGGGKNTSAGD-HDMSYPDLTRKEKRVRVNRCGE 434 (912)
Q Consensus 356 LddSIAVn~NFv~~~NL~~vl~dl~~gf~~~~~~rag~~~~~~~~~e~~~~~~~~~~-~~~~~~d~~~~~~r~~~~~~~~ 434 (912)
+++||||||||++..|++.||.++++|+.+..++++++++++...++++.+....++ +|+++.+..+++++-+......
T Consensus 286 le~TIAiTqNf~s~eNf~~Vw~ktv~Grpkls~~w~~~L~~~~pel~~l~~s~~~~e~~~~~~~sss~ssssssss~~~s 365 (407)
T KOG2130|consen 286 LEPTIAITQNFASKENFPFVWHKTVRGRPKLSRKWARLLALQRPELADLADSTHLEESTGLASDSSSDSSSSSSSSSSSS 365 (407)
T ss_pred cCceeeeeeccccccCCceeeecccCCCcchhhHHHHHHhhcChhHHHHhhhhccccccCcccccccccccccccCCCCC
Confidence 999999999999999999999999999999999999999999999999999887766 7999999999999888765555
Q ss_pred CCcccccccccccccCCCCcccccchhHHHHhhhhccccCcCCCCCCCCCchhhHH
Q 002526 435 IQNHEEDTNGVSKNYNSSKQDFSYDINFLAKFLDEDRDHYNFPWSSGNCTGKREMR 490 (912)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 490 (912)
+.+ |...++. +-+|.++.+++ +++.. +++|+.+|+.|||+|+
T Consensus 366 ~e~-e~d~~G~-------~gg~~~~~d~r---m~~~~---s~p~~m~~s~gq~~~~ 407 (407)
T KOG2130|consen 366 DEE-ESDDNGD-------NGGFKRKKDRR---MDGNG---SFPSSMGNSVGQRSMR 407 (407)
T ss_pred ccc-cccccCc-------ccccccchhhh---hhcCC---CCccccccccccccCC
Confidence 444 3333333 23899999997 55555 7899999999999874
No 2
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A ....
Probab=100.00 E-value=6.4e-38 Score=325.88 Aligned_cols=216 Identities=30% Similarity=0.578 Sum_probs=162.5
Q ss_pred HHHHHHHh--ccCCcccccccCCCccccCCc-----HHHHHHHhCCeeEEEEecC-----------------CceEEeeH
Q 002526 140 REEFDREC--AEEPILLSGLADTWPARNTWT-----IDQLLTRYGDTAFRISQRS-----------------VRSISMKF 195 (912)
Q Consensus 140 ~eeF~e~y--~nkPVIItG~~~~WPA~~kWT-----~dyL~e~~GD~~V~V~~~s-----------------~~~~~mtf 195 (912)
|++|.++| +++||||+|++.+|||+++|+ .+||.+++|+..|.+.... .....|+|
T Consensus 1 p~eF~~~~~~~~~PvVi~g~~~~w~a~~~W~~~~~~~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PF13621_consen 1 PEEFFERYVKPNKPVVIRGAAADWPAFQKWTDDEYLLDYLKEKYGDVPVPVRDSPNGISDSFGYNDDRKFVNFERERMPF 80 (251)
T ss_dssp -HHHHHHTCCTT--EEEESSSTTCCHHHH-S-----HHHHHHHHTSSEEEEEEEST--SSBTS-B-GCCCTCEEEEEEEH
T ss_pred CHHHHHHHhCCCCCEEEeCCccCCchhhhccchhHHHHHHHHHcCCeEEEEEecCCcccccccccccccccCCeeEECcH
Confidence 68999999 999999999999999999999 5999999999999986421 13579999
Q ss_pred HHHHHHHhhcC---CCCCeEEeccccccchhhhhhccCCCCccccchhcccCCCCCCCcceEEecCCCCCCccccCCCCC
Q 002526 196 KDYVAYMNVQH---DEDPLYIFDYKFGENAQGLLEDYRVPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALT 272 (912)
Q Consensus 196 ~dFldyl~~~~---de~plYLfD~~f~e~~P~L~~Dy~vP~~F~eDlf~~L~~~~RPd~rwL~IGp~GSgTplH~Dp~~T 272 (912)
++|++.+.... ....+|+.+..+.+.+|.|.++..+| +..+++.. .+...+||||++|++|++|+|+.
T Consensus 81 ~~f~~~~~~~~~~~~~~~~y~~~~~~~~~~~~l~~~~~~~--~~~~~~~~-----~~~~~~l~ig~~gs~t~lH~D~~-- 151 (251)
T PF13621_consen 81 RDFLDRLRANRDQRDKPYYYLQNWNLFEDFPELREDNDLP--FPPELFGK-----EPQSSNLWIGPPGSFTPLHYDPS-- 151 (251)
T ss_dssp HHHHHHHHHSCHSTSSSEEEEEEETHHHHSHHHHCCS-CH--HHHCHSCC-----HCCEEEEEEE-TTEEEEEEE-SS--
T ss_pred HHHHHHHHhcccccCCceEEEecCchHHHhhhhhhccccc--cchhhccc-----CccccEEEEeCCCceeeeeECch--
Confidence 99999998654 23578999988888899998885554 33344321 13456899999999999999994
Q ss_pred cccEEEEEeEEEEEEeCCCCCCCcceeeec---CCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCC
Q 002526 273 SAWNTLLCGRKRWALYPPGRVPLGVTVHVN---EDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGW 349 (912)
Q Consensus 273 sawnaqI~GrKrWiLfPP~~~p~gv~~~~~---~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGW 349 (912)
++|++||.|+|+|+||||.+.+.++..... ...+.+++.+|+ .++||.++++ ++++|+|+|||+||||+||
T Consensus 152 ~n~~~~i~G~K~~~L~pP~~~~~l~~~~~~~~~~~~~~~d~~~~d-----~~~~p~~~~~-~~~~~~l~pGD~LfiP~gW 225 (251)
T PF13621_consen 152 HNLLAQIRGRKRWILFPPDDSPNLYPRPDSHGGTVFSWVDPDNPD-----LERFPKFRKA-PPYEVVLEPGDVLFIPPGW 225 (251)
T ss_dssp EEEEEEEESEEEEEEE-GGGGGGCTBETTTST-TCBBSS-TTS-------TTT-CGGGG---EEEEEEETT-EEEE-TT-
T ss_pred hhhhhccCCCEEEEEECCccccccccceecccccceeeeeccChh-----hhhhhhhccC-ceeEEEECCCeEEEECCCC
Confidence 689999999999999999998766543211 123456667777 6899999886 8999999999999999999
Q ss_pred ceeeEeC--CC-cEEEeecccCCC
Q 002526 350 WHCILNL--ET-TIAVTQNFVDSK 370 (912)
Q Consensus 350 WHqV~NL--dd-SIAVn~NFv~~~ 370 (912)
||+|+|+ ++ |||||++|..+.
T Consensus 226 wH~V~~~~~~~~sisvn~w~~~~~ 249 (251)
T PF13621_consen 226 WHQVENLSDDDLSISVNYWFRTPF 249 (251)
T ss_dssp EEEEEESTTSSCEEEEEEEEESS-
T ss_pred eEEEEEcCCCCeEEEEEEEecccc
Confidence 9999999 76 999999987653
No 3
>KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-37 Score=331.04 Aligned_cols=318 Identities=22% Similarity=0.339 Sum_probs=228.5
Q ss_pred CCCccccCC--CCHHHHHHHh--ccCCcccccccCCCccc----cCCc--------------------------------
Q 002526 129 SQLVKRKKI--VTREEFDREC--AEEPILLSGLADTWPAR----NTWT-------------------------------- 168 (912)
Q Consensus 129 ~~~IeRv~~--LS~eeF~e~y--~nkPVIItG~~~~WPA~----~kWT-------------------------------- 168 (912)
...|+|+.. +++++|.+.| .+.||+|.++..+|+|. ..|.
T Consensus 27 r~~v~r~~g~~~d~~~~a~~~~~k~~~v~is~v~~d~~~~~~~~~s~~dl~~~~~l~n~~~~f~k~~v~~~~~~v~~~~~ 106 (427)
T KOG2131|consen 27 RPCVLRLIGPTADYGDFAERDTHKRPGVLISYVLEDWPCVSRDNESGADLNNNPDLKNFARSFAKRIVQNGDKNVFLCDL 106 (427)
T ss_pred hhhhhhhcccccCcccchhhhcccCCCccccccccCcccccCCCcchhhhccCcchhHHHHHHhHHHHhcCCcccccccc
Confidence 356778765 8899999999 78999999999999997 3442
Q ss_pred -----HHHHHHHhCCeeEEEEecC-CceEEeeHHHHHHH-----HhhcCCCCCeEEeccccccchhhhhhccCCCCcccc
Q 002526 169 -----IDQLLTRYGDTAFRISQRS-VRSISMKFKDYVAY-----MNVQHDEDPLYIFDYKFGENAQGLLEDYRVPDLFQE 237 (912)
Q Consensus 169 -----~dyL~e~~GD~~V~V~~~s-~~~~~mtf~dFldy-----l~~~~de~plYLfD~~f~e~~P~L~~Dy~vP~~F~e 237 (912)
.++|.+.||+..+++..+. .+...|+++++.-+ +... ...++|+.|||+...+|. ..-|..|++|+.
T Consensus 107 s~f~~~~~Le~ny~d~~v~~a~~~e~e~~~l~lad~~~~e~~~~~~~~-q~p~ly~kDwHL~~~~d~-~~~~~~pd~F~~ 184 (427)
T KOG2131|consen 107 SLFPDYEYLERNYGDFVVPVANCNEKERYSLKLADWEFREEQVQLACP-QAPSLYGKDWHLYRFLDN-DFPYWTPDLFAK 184 (427)
T ss_pred ccCccHHHHHhhhhhcchhhccccchhhhhhhhccchhHHHhHhhhcC-CCccccccchheeeecCc-ccccccchhhhh
Confidence 1345555555555554321 11222333333322 2211 234799999998888873 556789999999
Q ss_pred chhcccC-CCCCCCcceEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCC--CCc
Q 002526 238 DLFNVLD-GDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIE--TPS 314 (912)
Q Consensus 238 Dlf~~L~-~~~RPd~rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~--sPd 314 (912)
|+++... ....++||+.|+||+||+|++|.|++++++|.++|+|+|+|+|+||++..... +..|+..+. .+-
T Consensus 185 dwlne~~i~~~~ddyrFvy~Gp~gSwtp~HaDVf~s~swS~nicG~KrWl~~pP~qe~~l~-----dr~gnlp~~~~~~~ 259 (427)
T KOG2131|consen 185 DWLNEFVIDGESDDYRFVYAGPAGSWTPFHADVFHSPSWSVNICGRKRWLLYPPEQEQTLA-----DRYGNLPLPSWITK 259 (427)
T ss_pred cccchhhccCCCCceeEEEeccCCCCCccchhhhcCCcceeeeecceeEEEeChHHhhhhh-----hhccCcCCcccccc
Confidence 9987321 22467899999999999999999999999999999999999999999865422 334433221 111
Q ss_pred chhhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecccCCCCHHHHHHhhccCcccccchhhhhh
Q 002526 315 SLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVCLDFAPGYRHKGVCRAGLL 394 (912)
Q Consensus 315 sleW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~~NL~~vl~dl~~gf~~~~~~rag~~ 394 (912)
++ .++ .+.++++|+|||++|||+||+|||.|+++||||||||+|.+|+..|+..|...| +++++..++
T Consensus 260 -----ld---~~~--~~~lei~Qepge~VFvPsGW~hQV~NL~dTISINHNW~N~~nl~~~w~~Lk~~y--~a~~esisd 327 (427)
T KOG2131|consen 260 -----LD---LFR--GPLLEIFQEPGETVFVPSGWHHQVLNLGDTISINHNWCNATNLAWMWDALKEDY--PALAESISD 327 (427)
T ss_pred -----cc---ccc--cchhhhhccCCceeeccCccccccccccceeeecccccccccHHHHHHHHHhhh--hhhhhhhhh
Confidence 11 111 367999999999999999999999999999999999999999999999988888 467777777
Q ss_pred cccchhhccccCccCCCCCCCCcchhhHHHHHHhhhccCcCCcccccccccccccCCCCcccccchhHHHHhhhhccccC
Q 002526 395 ALEEESLEGGGKNTSAGDHDMSYPDLTRKEKRVRVNRCGEIQNHEEDTNGVSKNYNSSKQDFSYDINFLAKFLDEDRDHY 474 (912)
Q Consensus 395 ~~~~~~~e~~~~~~~~~~~~~~~~d~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 474 (912)
..+++++..|+..++..+|+|+.+|..=-+++..++.+ +.+.+..++.++-|++.+.+++ ||.+.+.||
T Consensus 328 -d~md~~~~~cq~~lra~~gin~~ef~~f~~~~a~l~h~----~~~~~a~l~~s~~~~~~~~q~e------vl~~l~~~~ 396 (427)
T KOG2131|consen 328 -DLMDDFPLECQFSLRATEGINANEFIYFPDFWAMLKHA----TLNRDASLFISTFLSDWPIQPE------VLPPLSWEY 396 (427)
T ss_pred -hccccchhhhhhhhhhhccccccceEeehHHHHHHHHH----HhccchhhhHHhhhcccccchh------hhcceeecC
Confidence 66777777777777777999999996644555433222 2334455666666666666655 566666665
Q ss_pred cC
Q 002526 475 NF 476 (912)
Q Consensus 475 ~~ 476 (912)
+.
T Consensus 397 ~~ 398 (427)
T KOG2131|consen 397 SI 398 (427)
T ss_pred ce
Confidence 43
No 4
>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=99.93 E-value=6.4e-27 Score=251.14 Aligned_cols=220 Identities=23% Similarity=0.387 Sum_probs=185.5
Q ss_pred CCccccCCCCHHHHHHHh--ccCCcccccccCCCccccCCcHHHHHHHhCCeeEEEEecC------CceEEeeHHHHHHH
Q 002526 130 QLVKRKKIVTREEFDREC--AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRISQRS------VRSISMKFKDYVAY 201 (912)
Q Consensus 130 ~~IeRv~~LS~eeF~e~y--~nkPVIItG~~~~WPA~~kWT~dyL~e~~GD~~V~V~~~s------~~~~~mtf~dFldy 201 (912)
..+++.+.++.++|+..+ ++.|+|++|...+|||.++|..+||.+..|.+.|+|+..+ ....-|++.+|+.+
T Consensus 127 ~~~~~~~~~~l~~~l~d~~~~~~p~~~l~~~~hwpa~~kw~l~~l~~va~~rTvpvEvg~~y~~~~w~q~l~t~~~g~~R 206 (355)
T KOG2132|consen 127 IDVPGEDRLSLQEFLNDTVGRGTPVILLGFNWHWPAIQKWSLGYLQQVAGNRTVPVEVGSTYADEDWSQNLMTQIKGIKR 206 (355)
T ss_pred hhhccccchHHHHHHHHhhcCCCceEEecccccchHhhhcchhHHHhcccceeeeeecccccchhHHHhhhHHHhhhhhh
Confidence 445666789999999998 9999999999999999999999999999999999997643 23567888888887
Q ss_pred HhhcCCCCCeEEeccccccchhhhhhccCCCCccccchhcccCCCCCCCcceEEecCCCCCCccccCCCCCcccEEEEEe
Q 002526 202 MNVQHDEDPLYIFDYKFGENAQGLLEDYRVPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCG 281 (912)
Q Consensus 202 l~~~~de~plYLfD~~f~e~~P~L~~Dy~vP~~F~eDlf~~L~~~~RPd~rwL~IGp~GSgTplH~Dp~~TsawnaqI~G 281 (912)
+......+++|+.+.++.+..|++..|+..|++.....|+ .+-.-+..|+||+|++|++|.|+. ||+.+||.|
T Consensus 207 ~~~~~p~~~~YlAqh~lfdqi~elk~Di~iPDyc~~~~f~-----~~~v~~~~w~GpaGtV~pih~dp~--hNi~~qv~G 279 (355)
T KOG2132|consen 207 CILFEPRECLYLAQHHLFDQIPELKFDISIPDYCSFPNFE-----NEVVDINAWIGPAGTVLPIHMDPW--HNILSQVFG 279 (355)
T ss_pred hhcCCccccchhhhhhhhccchhhhhccCCCceeecCCCC-----ccccceeEEeccCCceeccccccc--cceeeeeec
Confidence 6655445789999999999999999999999986532221 112346789999999999999999 569999999
Q ss_pred EEEEEEeCCCCCCCcceee-ecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEeCCCcE
Q 002526 282 RKRWALYPPGRVPLGVTVH-VNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTI 360 (912)
Q Consensus 282 rKrWiLfPP~~~p~gv~~~-~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGWWHqV~NLddSI 360 (912)
+|+|+|+||..++..++.. .-.+.|.||+++|| +..||.++++ +.++|+++|||+||||.-|||.|++++.++
T Consensus 280 ~k~i~l~~p~~s~~lyP~d~~~~~tsqvdvenPd-----lk~fp~~~k~-~~l~~lL~pGe~L~iP~kwwhyvrs~d~s~ 353 (355)
T KOG2132|consen 280 RKRIRLYPPEDSGALYPTDTYLLETSQVDVENPD-----LKAFPKFAKA-RFLDCLLEPGEALFIPPKWWHYVRSLDKSF 353 (355)
T ss_pred ceEEEEecCcccCCCCCccchhhcccccccCCCC-----hhhhhHHHHH-HHHHHhcCCchhccccHHHhhhhhhccccc
Confidence 9999999999987766532 11237889999999 8999999885 899999999999999999999999999887
Q ss_pred EE
Q 002526 361 AV 362 (912)
Q Consensus 361 AV 362 (912)
++
T Consensus 354 s~ 355 (355)
T KOG2132|consen 354 SV 355 (355)
T ss_pred cC
Confidence 64
No 5
>KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism]
Probab=99.86 E-value=9.4e-22 Score=212.74 Aligned_cols=227 Identities=22% Similarity=0.414 Sum_probs=164.1
Q ss_pred ccccC-CCCHHHHHHHh--ccCCcccccccCCCccccCCcH-HHHHHHhCCeeEEEEec-----C------------Cce
Q 002526 132 VKRKK-IVTREEFDREC--AEEPILLSGLADTWPARNTWTI-DQLLTRYGDTAFRISQR-----S------------VRS 190 (912)
Q Consensus 132 IeRv~-~LS~eeF~e~y--~nkPVIItG~~~~WPA~~kWT~-dyL~e~~GD~~V~V~~~-----s------------~~~ 190 (912)
|.+.+ .+|+.+|+++| +|+||||+.+..+|||.++|+. +||.++.||..|.|+.. . +..
T Consensus 24 v~~lD~~Ptpl~Fyr~fvs~n~PvIIrkAL~hWpal~lWs~p~Yl~~algd~vvsvaitPngyadgav~~g~e~f~~pae 103 (437)
T KOG2508|consen 24 VNLLDLTPTPLDFYRKFVSTNTPVIIRKALPHWPALKLWSQPDYLLSALGDIVVSVAITPNGYADGAVMSGNEMFIKPAE 103 (437)
T ss_pred cccccCCCchHHHHHhhhcCCCcEEEecccccCchhhccCchHHHHHhccCeEEEEEeCCCCccccccccCcceeechhh
Confidence 55555 57899999999 9999999999999999999995 59999999999988742 1 112
Q ss_pred EEeeHHHHHHHHhhcC-CCCCeEEec--cccccchhhhhhccCCCC-ccccchhcccCCCCCCCcceEEecCCCCCCccc
Q 002526 191 ISMKFKDYVAYMNVQH-DEDPLYIFD--YKFGENAQGLLEDYRVPD-LFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWH 266 (912)
Q Consensus 191 ~~mtf~dFldyl~~~~-de~plYLfD--~~f~e~~P~L~~Dy~vP~-~F~eDlf~~L~~~~RPd~rwL~IGp~GSgTplH 266 (912)
++|+|++-+..+.... ....+|+.+ .++...+|.+..|..+-+ .|+...|. ..|+..+||||...++|++|
T Consensus 104 ~KlklsevL~vl~~~~~~~~Vly~qkQ~snl~~elp~la~Dl~~~d~~wa~eafg-----k~PdavNlWiG~~~avTSlH 178 (437)
T KOG2508|consen 104 QKLKLSEVLYVLTQYDESNEVLYGQKQNSNLVKELPPLATDLLLTDFSWAPEAFG-----KVPDAVNLWIGKSEAVTSLH 178 (437)
T ss_pred hhccchhhheehhcccCCCceeehhhhcccccccccccccccccccccccHHHhC-----CChhheeeeecccccccccc
Confidence 3566666666555432 135688875 346666777776665532 23433332 46788899999999999999
Q ss_pred cCCCCCcccEEEEEeEEEEEEeCCCCCCC--------cceeeecCCCCCccCC----CCcch--hhh-------------
Q 002526 267 VDPALTSAWNTLLCGRKRWALYPPGRVPL--------GVTVHVNEDDGDVNIE----TPSSL--EWW------------- 319 (912)
Q Consensus 267 ~Dp~~TsawnaqI~GrKrWiLfPP~~~p~--------gv~~~~~~~~s~Vdv~----sPdsl--eW~------------- 319 (912)
+|+++| ++|+|.|.|+|+|.||++.+. +.+. ...+.+..-++ .+..+ .|+
T Consensus 179 kDhyEN--lYaViSGeKhFvlipP~d~~~lp~eiyp~g~ys-y~~e~g~fk~e~~dEe~~~~a~~~~svd~~~s~~~~a~ 255 (437)
T KOG2508|consen 179 KDHYEN--LYAVISGEKHFVLIPPDDANQLPLEIYPNGLYS-YEGEDGPFKSEGLDEEDAAIAKTWFSVDPIGSPKELAV 255 (437)
T ss_pred cccccc--eEEEEeccceEEEeCcccccccceeecCCccee-eecCCCceeecccchhhhhhcceeeeecccCCHHHhcc
Confidence 999975 999999999999999998753 2221 11122211111 01001 122
Q ss_pred -hhcCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEeC----CCcEEEeecc
Q 002526 320 -LDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNL----ETTIAVTQNF 366 (912)
Q Consensus 320 -l~~yP~l~~a~~~~E~vLePGDvLFVPsGWWHqV~NL----ddSIAVn~NF 366 (912)
..+||.+....++..+.+.+|+++|.|..|.|+|-.. +.+|+||.++
T Consensus 256 ~~~k~~l~~~~~k~~~~rv~a~~i~~lp~~w~h~~sq~~gd~~~~Iavn~~~ 307 (437)
T KOG2508|consen 256 PQEKIPLLEAEYKPEMDRVLAGQILYLPEDWFHHVSQVGGDPESDIAVNEWY 307 (437)
T ss_pred chhhCccccccccceeeeeeccccccChhhhhhhccccCCCccceeEEeeec
Confidence 4577777665688999999999999999999999888 5789998765
No 6
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.54 E-value=3.6e-14 Score=148.69 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=82.7
Q ss_pred cccccCCCCCceeeec-ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccCCC
Q 002526 540 EKLPVGNGSNPVYLMA-DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDG 618 (912)
Q Consensus 540 ~~~p~~~GsnpV~~v~-~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~~~ 618 (912)
+++..|..+|.||.++ ++|||++.+.... ..+-.|.+++..|.+ .+..++|++++.|...
T Consensus 3 ~~~~~gG~~n~vy~~~~~~VlR~~~~~~~~---~~~~~E~~~l~~L~~---~~~v~vP~~~~~~~~~------------- 63 (235)
T cd05155 3 EPVDSGGTDNATFRLGDDMSVRLPSAAGYA---GQVRKEQRWLPRLAP---HLPLPVPEPLGKGEPG------------- 63 (235)
T ss_pred eeccCCCcccceEEcCCceEEEcCCccchH---HHHHHHHHHHHHHhc---cCCCCCCceeecCCCc-------------
Confidence 5667778889999999 7999998864322 235679988888853 2667899999988732
Q ss_pred CCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcCCHHHHH
Q 002526 619 KGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDVL 698 (912)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l~~~d~~ 698 (912)
....++|+||++++|..+.+. .+ .+..
T Consensus 64 -------------------------------------------------~~~~~~~~l~~~i~G~~l~~~--~~--~~~~ 90 (235)
T cd05155 64 -------------------------------------------------EGYPWPWSVYRWLEGETATAA--AL--SDPS 90 (235)
T ss_pred -------------------------------------------------cCCCcceEEEEeecCCCCCcc--cc--CCHH
Confidence 012389999999999998776 22 3456
Q ss_pred HHHHHHHHHHHhhcccCCCCC
Q 002526 699 NLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 699 ~la~~lg~~~~~lH~lp~~~~ 719 (912)
+++..||++++.||++|.+..
T Consensus 91 ~l~~~la~~l~~LH~i~~~~~ 111 (235)
T cd05155 91 EFAEDLADFLAALRQIDPSGG 111 (235)
T ss_pred HHHHHHHHHHHHHhCCCcccC
Confidence 899999999999999988654
No 7
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.44 E-value=4.8e-13 Score=135.57 Aligned_cols=192 Identities=27% Similarity=0.412 Sum_probs=122.2
Q ss_pred ccCCC-CCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccCC
Q 002526 543 PVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWD 617 (912)
Q Consensus 543 p~~~G-snpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~~ 617 (912)
|+++| +|-||.|. .+|||++.... +...+..|.+++..|.+.+. ++|++++.+....
T Consensus 4 ~l~~G~~n~~~~v~~~~~~~vlK~~~~~~---~~~~~~~e~~~~~~l~~~~~----pvP~~~~~~~~~~----------- 65 (239)
T PF01636_consen 4 PLSGGFSNRVYRVTTDDGRYVLKFYRPPD---AAERLRREAAVLRQLAEHGI----PVPRVLAFDTSDE----------- 65 (239)
T ss_dssp EEEESSSSEEEEEEETTSEEEEEEESSHH---HHHHHHHHHHHHHHHHHTTS----BS--EEEEEEETE-----------
T ss_pred cCCCCCeeeEEEEEECCcEEEEEEeCCCC---CHHHHHHHHHHHHHHHhcCC----CCceEEeeccccc-----------
Confidence 55665 78899887 48999988552 22234579989988875544 6999998654220
Q ss_pred CCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcCCHHHH
Q 002526 618 GKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDV 697 (912)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l~~~d~ 697 (912)
...++|++|++++|..+.. .++.++.
T Consensus 66 ---------------------------------------------------~~~~~~~~~~~i~g~~~~~---~~~~~~~ 91 (239)
T PF01636_consen 66 ---------------------------------------------------FNGFPYLLMEYIPGRPLDD---ELSPEQR 91 (239)
T ss_dssp ---------------------------------------------------ETSEEEEEEEEESSEEHHH---TSTHHHH
T ss_pred ---------------------------------------------------ccccceEEEEEeccccccc---ccccccc
Confidence 1126899999999999998 8999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHH-HHHHHHHHHHHHHHHhhcCCC
Q 002526 698 LNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIF-IRTLARKKKNLVNRLTAWGHP 776 (912)
Q Consensus 698 ~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f-~~~l~~~~~~~~~~~~~wg~~ 776 (912)
..++..+|+.++.||+++ ++.... ..|..+ +..++ .......++..+.
T Consensus 92 ~~~~~~~~~~l~~lh~~~-~~~~~~---------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~-- 140 (239)
T PF01636_consen 92 PELLRQLGRALAQLHQVP-PPFSPF---------------------------ADWPEWRLEFLR-QLESWTARLRASE-- 140 (239)
T ss_dssp HHHHHHHHHHHHHHHHSH-TTCCCH---------------------------THHHHHHHHHHH-HHHHHHHHHHHHC--
T ss_pred ccccccchhhhhhccccc-cccccc---------------------------cccccccccccc-ccccccccccchh--
Confidence 999999999999999998 332221 222222 11112 1122211444442
Q ss_pred CCHhHHhhhhh-cCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCC
Q 002526 777 IPKALIDKVDE-YIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYD 855 (912)
Q Consensus 777 lp~~l~~~~~~-ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (912)
++. .++.+.+ .+.. +..++.. ..++++||+|+++.||++.+
T Consensus 141 ~~~-~~~~~~~~~~~~-~~~~~~~----------~~~~~~~HgD~~~~Nil~~~-------------------------- 182 (239)
T PF01636_consen 141 LFD-DLEELEERLLQE-LEALLPK----------PLPPVLIHGDLHPGNILVDP-------------------------- 182 (239)
T ss_dssp CHH-HHHHHHHHHHHH-HHHHHHC----------CSCEEEE-SS-SGGGEEEES--------------------------
T ss_pred hhh-hhHHHHHHHHHH-HHhhhcc----------CCCcEEEEeccccccceeee--------------------------
Confidence 444 3444443 2221 1122210 36899999999999999974
Q ss_pred CcCcCcceeeeeeeecCCCCCcchhh
Q 002526 856 EFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 856 ~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
..++. +||||+++.+||+..
T Consensus 183 -----~~~~i-~iID~e~a~~~~~~~ 202 (239)
T PF01636_consen 183 -----SDGRI-GIIDFEDAGWGDPAY 202 (239)
T ss_dssp -----STTEE-EE--GTT-EEEETHH
T ss_pred -----cccee-EEEecccceECCHHH
Confidence 13778 999999999999875
No 8
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.37 E-value=1.2e-11 Score=125.48 Aligned_cols=111 Identities=24% Similarity=0.260 Sum_probs=82.8
Q ss_pred ccCCC-CCceeeec-----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccC
Q 002526 543 PVGNG-SNPVYLMA-----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPW 616 (912)
Q Consensus 543 p~~~G-snpV~~v~-----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~ 616 (912)
|+++| +|-||.|. .+|||+...........-+-.|.+++..|... ...+|++++.....
T Consensus 5 ~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~----~~~vp~~~~~~~~~----------- 69 (223)
T cd05154 5 QLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT----GVPVPKVLALCEDP----------- 69 (223)
T ss_pred ecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC----CCCCCCEEEECCCC-----------
Confidence 66777 89999873 68999987442212333456899888888643 34689988765521
Q ss_pred CCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHh--hcCCH
Q 002526 617 DGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLR--DALSG 694 (912)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~--~~l~~ 694 (912)
.....+|+||++++|..+.+.+ ..++.
T Consensus 70 ---------------------------------------------------~~~~~~~~v~e~i~G~~l~~~~~~~~~~~ 98 (223)
T cd05154 70 ---------------------------------------------------SVLGTPFYVMERVDGRVLRDRLLRPELSP 98 (223)
T ss_pred ---------------------------------------------------CccCCceEEEEEeCCEecCCCCCCCCCCH
Confidence 0012679999999999998877 46899
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 695 EDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 695 ~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
++...++..+|+.|+.||.++.+..
T Consensus 99 ~~~~~i~~~i~~~l~~lH~~~~~~~ 123 (223)
T cd05154 99 EERRALARALADTLAALHSVDPAAV 123 (223)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhc
Confidence 9999999999999999999986543
No 9
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.36 E-value=3.9e-12 Score=137.99 Aligned_cols=204 Identities=16% Similarity=0.172 Sum_probs=132.4
Q ss_pred HHHhhcCCCCCccccccccCCCC---Cceeee----c-ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccc
Q 002526 526 EICNFHKLPTLTAEEKLPVGNGS---NPVYLM----A-DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPD 597 (912)
Q Consensus 526 ~i~~~~~l~~~~~~~~~p~~~Gs---npV~~v----~-~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~ 597 (912)
++++.|||... ...+.+.+| |=||.+ | .+|||+=+.+... .++-.|...++.|+ ..+..++|+
T Consensus 2 ~~~~~~~~~~~---~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~---~~l~rE~~vL~~L~---~~l~vpvP~ 72 (276)
T cd05152 2 ELARKHGLTLK---PETLSLNESGLDFQVVFAKDTDGVPWVLRIPRRPDVS---ERAAAEKRVLALVR---KHLPVQVPD 72 (276)
T ss_pred chhhhcCCccC---CCcceecCCcceeEEEEEEcCCCCeEEEEecCCHHHH---HHHHHHHHHHHHHH---hcCCCCCCc
Confidence 46788999885 222223344 456665 4 6999987643322 23568997777774 347788898
Q ss_pred eeeeeeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEE
Q 002526 598 VLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIIT 677 (912)
Q Consensus 598 ~la~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~ 677 (912)
++..+ +.+++|
T Consensus 73 ~~~~~---------------------------------------------------------------------~~~~~y 83 (276)
T cd05152 73 WRVHT---------------------------------------------------------------------PELIAY 83 (276)
T ss_pred eeeec---------------------------------------------------------------------CceEEE
Confidence 65321 346788
Q ss_pred eecCCCchhHH--------hhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCC
Q 002526 678 KRCKGKMFAQL--------RDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVP 749 (912)
Q Consensus 678 ~r~~G~~~~~~--------~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (912)
++++|.++..+ |...+..+...||..||+.|+.||.+|.+..... +.+
T Consensus 84 ~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~------------------------g~~ 139 (276)
T cd05152 84 PKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAA------------------------GIP 139 (276)
T ss_pred eccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhcccc------------------------CCC
Confidence 88888877532 2233235667899999999999999987654432 012
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 750 AEWEIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 750 ~~W~~f~~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
..+..-. +++-...+++...-. .+|..+++.+.++|+++ .+. ..+++++|+|++++||++.+
T Consensus 140 ~~~~~~~---~~~~~~~l~~~~~~~-~~~~~l~~~~~~~L~~~--~~~------------~~~~~lvHGD~~~~Nilv~~ 201 (276)
T cd05152 140 VETPEEV---RQTMADRMDRVKEEF-GVSEALWNRWQAWLDDD--SYW------------PRHTVLVHGDLHPGHILIDE 201 (276)
T ss_pred CCCHHHH---HHHHHHHHHHHHHhc-CCCHHHHHHHHHHHhhc--CCC------------CCCCeeEeCCCCCCcEEEeC
Confidence 2221111 111122222322222 48999999999999742 121 24789999999999999955
Q ss_pred cccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 830 CCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
.-+.++||||+++.+||+..
T Consensus 202 --------------------------------~~~~~gviDWe~a~iGDPa~ 221 (276)
T cd05152 202 --------------------------------DARVTGLIDWTEAKVGDPAR 221 (276)
T ss_pred --------------------------------CCCEEEEECcHhcccCCHHH
Confidence 13689999999999999965
No 10
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.34 E-value=1.2e-11 Score=129.66 Aligned_cols=97 Identities=29% Similarity=0.355 Sum_probs=73.8
Q ss_pred CCCCCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccCCCCC
Q 002526 545 GNGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDGKG 620 (912)
Q Consensus 545 ~~GsnpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~~~~~ 620 (912)
|.=+|.||-++ .+|||+.+... . .-+..|++.+..|... ..+|+++..+...
T Consensus 9 g~~~~~v~~~~~~~~~~~vk~~~~~~-~---~~~~~E~~~l~~l~~~-----~~vP~v~~~~~~~--------------- 64 (244)
T cd05150 9 GQSGATVYRLDGKNPGLYLKIAPSGP-T---YELEREAERLRWLAGK-----LPVPEVIDYGSDD--------------- 64 (244)
T ss_pred CCCcCeEEEEcCCCCcEEEEecCCCc-c---cchHHHHHHHHHHHhc-----CCCCeEEEEEecC---------------
Confidence 44457999886 48889987443 2 2255799888888532 5699999877622
Q ss_pred cccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcCCHHHHHHH
Q 002526 621 VLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDVLNL 700 (912)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l~~~d~~~l 700 (912)
| .+|+||++++|..+.+.+.. .+..++
T Consensus 65 ------------------------------~--------------------~~~lv~e~i~G~~l~~~~~~---~~~~~~ 91 (244)
T cd05150 65 ------------------------------G--------------------RAWLLTSAVPGVPAAALWEE---LEPERL 91 (244)
T ss_pred ------------------------------C--------------------ccEEEEEeeCCccHhHhhcc---cCHHHH
Confidence 2 68999999999999988763 345688
Q ss_pred HHHHHHHHHhhcccCCCC
Q 002526 701 ASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 701 a~~lg~~~~~lH~lp~~~ 718 (912)
+.++|+.++.||++|.+.
T Consensus 92 ~~~l~~~l~~lH~i~~~~ 109 (244)
T cd05150 92 VDALAEALRRLHALPVAD 109 (244)
T ss_pred HHHHHHHHHHHhcCCccc
Confidence 999999999999998643
No 11
>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=99.34 E-value=2.3e-13 Score=126.76 Aligned_cols=110 Identities=23% Similarity=0.376 Sum_probs=66.8
Q ss_pred eEEecCCCCCCccccCCCCCcc-cEEEEEeEEEEEEeCCCCCCCcce-eeec--CCCCCccCCCCcchhhhhhcCCCCCC
Q 002526 253 WVIIGPQRSGASWHVDPALTSA-WNTLLCGRKRWALYPPGRVPLGVT-VHVN--EDDGDVNIETPSSLEWWLDFYPLLAD 328 (912)
Q Consensus 253 wL~IGp~GSgTplH~Dp~~Tsa-wnaqI~GrKrWiLfPP~~~p~gv~-~~~~--~~~s~Vdv~sPdsleW~l~~yP~l~~ 328 (912)
|++||+++|.|++|.|...+.+ ++....|.|.|.++||.+...... .... ...... ...-. ..+..+. ....
T Consensus 1 ~~~ig~~~s~t~~H~e~~~~~sv~~~~~g~~k~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~p~~--l~~~ 76 (114)
T PF02373_consen 1 WLYIGMKGSYTPWHIEDNGLSSVNYHHFGGSKVWYIVPPEDADKFEKFLRSKESQNCPQF-LDHKN-IFVSPEQ--LKKA 76 (114)
T ss_dssp EEEEE-TTEEEEEEE-GGG-EEEEEEEEESEEEEEEE-GGGHHHHHHHHHHHHHHHSTTG-GCTGG-EEEGHHH--HHHT
T ss_pred CEEEeCCCcCCCcEecCCCCceeeeeccCcceEeEEechhhhhhHHHHHhhccccccccc-ccccc-cccceee--eecc
Confidence 6899999999999999998874 666778899999999987532110 0000 000000 00000 0000111 0111
Q ss_pred CCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecc
Q 002526 329 DDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNF 366 (912)
Q Consensus 329 a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NF 366 (912)
.-+.++++|+|||+||||+||+|+|.|++.||+++.||
T Consensus 77 gi~~~~~~Q~~Ge~V~i~pg~~H~v~n~g~~i~~a~Nf 114 (114)
T PF02373_consen 77 GIPVYRFVQKPGEFVFIPPGAYHQVFNLGDNISEAVNF 114 (114)
T ss_dssp TS--EEEEEETT-EEEE-TT-EEEEEESSSEEEEEEEE
T ss_pred CcccccceECCCCEEEECCCceEEEEeCCceEEEEecC
Confidence 13789999999999999999999999999999999998
No 12
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=99.32 E-value=6.3e-12 Score=138.55 Aligned_cols=209 Identities=17% Similarity=0.240 Sum_probs=126.6
Q ss_pred cCCCCHHHHHHHh-ccCCcccccccCCCccccCCcHHHHHHHhCCeeEEEE---ecCCceE---EeeHHHHHHHHhhcCC
Q 002526 135 KKIVTREEFDREC-AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRIS---QRSVRSI---SMKFKDYVAYMNVQHD 207 (912)
Q Consensus 135 v~~LS~eeF~e~y-~nkPVIItG~~~~WPA~~kWT~dyL~e~~GD~~V~V~---~~s~~~~---~mtf~dFldyl~~~~d 207 (912)
...+|+++|.+.| ++||+|||++..+. ...-++|.|.+-+-...|... ..+...- .-+|.++=. .... .
T Consensus 12 ~~glt~~~FL~~YWqkKPlliR~a~p~~--~~p~~pdeLa~La~~edV~srLV~~~~~~~w~~~~gPfe~~d~-~~~p-~ 87 (383)
T COG2850 12 PLGLTPEDFLRDYWQKKPLLIRNAFPEF--HSPLSPDELAGLAQEEDVTSRLVSHESDGTWQVSHGPFEEEDF-LGLP-R 87 (383)
T ss_pred cCCCCHHHHHHHHhhhcchHHhhccccc--ccCCCHHHHHHHhccccccchhhhhccCCceeEeeCccchhcc-ccCC-c
Confidence 3578999999999 99999999988652 345566778777765544321 1111111 112222211 1100 0
Q ss_pred CCCeEEec-cccccchhhhhhccC-CCCccccchhcccCCCCCCCcceEEecCCCCCCccccCCCCCcccEEEEEeEEEE
Q 002526 208 EDPLYIFD-YKFGENAQGLLEDYR-VPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRW 285 (912)
Q Consensus 208 e~plYLfD-~~f~e~~P~L~~Dy~-vP~~F~eDlf~~L~~~~RPd~rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrW 285 (912)
...+-+.. .++......|.+.|+ +|.. |-+..++...+.|++-..|+|.+. .+.+|.+|+|||
T Consensus 88 ~wsllvq~vd~w~p~v~~l~~~FrflP~w-------------r~ddiMIS~a~~GGgvg~H~D~YD--VfliQg~G~RRW 152 (383)
T COG2850 88 NWSLLVQAVDHWHPEVAALMEPFRFLPDW-------------RIDDIMISFAAPGGGVGPHFDQYD--VFLIQGQGRRRW 152 (383)
T ss_pred CceEEEehhhhcCHHHHHHHHHhccCccc-------------cccceEEEEecCCCccCccccchh--eeEEeeccccee
Confidence 11111111 111222334555554 3332 223445677888889999999996 499999999999
Q ss_pred EEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeec
Q 002526 286 ALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQN 365 (912)
Q Consensus 286 iLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~N 365 (912)
.+-.+......++ + ....+..|- ....+.+++|||+||||+||||.-+..++|...++-
T Consensus 153 ~v~~~~~~~~~~~-~-----~d~~~~~~f---------------~~~~d~vlepGDiLYiPp~~~H~gvae~dc~tySvG 211 (383)
T COG2850 153 RVGKKCNMSTLCP-H-----PDLLILAPF---------------EPDIDEVLEPGDILYIPPGFPHYGVAEDDCMTYSVG 211 (383)
T ss_pred ecCCcccccCcCC-C-----cchhhcCCC---------------CchhhhhcCCCceeecCCCCCcCCcccccccceeee
Confidence 9988865432221 1 111111111 234778999999999999999999999999888888
Q ss_pred ccCCCCHHHHHHhhccCcc
Q 002526 366 FVDSKNFEFVCLDFAPGYR 384 (912)
Q Consensus 366 Fv~~~NL~~vl~dl~~gf~ 384 (912)
|..++- ..++..+.++|+
T Consensus 212 ~r~Pn~-~ell~~~~~~~~ 229 (383)
T COG2850 212 FRAPNT-RELLSGFLDFFL 229 (383)
T ss_pred ccCCcH-HHHHHHHHhhcc
Confidence 887653 334444555554
No 13
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.23 E-value=1.7e-10 Score=121.83 Aligned_cols=177 Identities=16% Similarity=0.201 Sum_probs=119.9
Q ss_pred cccCCC-CCceeeec--ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccCCC
Q 002526 542 LPVGNG-SNPVYLMA--DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDG 618 (912)
Q Consensus 542 ~p~~~G-snpV~~v~--~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~~~ 618 (912)
.|++.| ||.||... ++|+|+++++....+ +-.|.+....|.+ +..++|++++.|.-.
T Consensus 7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~~~~~~---i~~E~~~l~~l~~----~glpvP~~~~~~~~~------------- 66 (226)
T TIGR02172 7 TQTGEGGNGESYTHKTGKWMLKLYNPGFDKET---IKREFDASRKVFS----LGIPTPHPFDLVEDG------------- 66 (226)
T ss_pred eeecCCCCcceeEecCCCEEEEeCCCCCCHHH---HHHHHHHHHHHHH----cCCCCCceEEEEecC-------------
Confidence 466655 77999854 789999997653333 4578877777653 345699999988622
Q ss_pred CCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCc-hhHHhhcCCHHHH
Q 002526 619 KGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKM-FAQLRDALSGEDV 697 (912)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~-~~~~~~~l~~~d~ 697 (912)
+ .-++||++++|.. +.++ ..++..+.
T Consensus 67 --------------------------------~--------------------~~glv~e~i~G~~~~~~~-~~~~~~~~ 93 (226)
T TIGR02172 67 --------------------------------G--------------------RLGLIYELIVGKRSFSRI-ISDNPSRL 93 (226)
T ss_pred --------------------------------C--------------------eeeeeeeecCCccchhhh-hcCCHHHH
Confidence 1 2357999999974 4443 34567788
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 002526 698 LNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTAWGHPI 777 (912)
Q Consensus 698 ~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f~~~l~~~~~~~~~~~~~wg~~l 777 (912)
..++..||+.++.||++|.+.... +.-+ +.+.+++.+=. .+
T Consensus 94 ~~l~~~la~~l~~lH~~~~~~~~l---------------------------~~~~-----------~~~~~~l~~~~-~~ 134 (226)
T TIGR02172 94 EEIAKIFAEMAKKLHSTKCDTSTF---------------------------QSYK-----------EKIRKFIEEKD-FV 134 (226)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcH---------------------------HHHH-----------HHHHHHHHhcc-CC
Confidence 899999999999999997653221 1112 22222232221 35
Q ss_pred CHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCc
Q 002526 778 PKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEF 857 (912)
Q Consensus 778 p~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (912)
|..+++.+.++|-. + ..+++++|+|+++.||++.+
T Consensus 135 ~~~~~~~l~~~l~~----~-------------~~~~~~~HgD~~~~Nii~~~---------------------------- 169 (226)
T TIGR02172 135 PKDYKEKARAFIKE----V-------------PDTSTCLHGDFQIGNLITSG---------------------------- 169 (226)
T ss_pred CHHHHHHHHHHHHh----C-------------CCCCceEecCCCCCcEEEcC----------------------------
Confidence 66677776666621 1 23567899999999999955
Q ss_pred CcCcceeeeeeeecCCCCCcchhh
Q 002526 858 GEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 858 ~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
+. .+||||+++.+||+..
T Consensus 170 ---~~---~~iIDwe~a~~Gdp~~ 187 (226)
T TIGR02172 170 ---KG---TYWIDLGDFGYGNPLF 187 (226)
T ss_pred ---CC---cEEEechhcCcCCHHH
Confidence 12 6799999999999864
No 14
>PLN02876 acyl-CoA dehydrogenase
Probab=99.20 E-value=2.2e-10 Score=141.23 Aligned_cols=208 Identities=15% Similarity=0.197 Sum_probs=130.1
Q ss_pred cccCCC-CCceeeec--------ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCcee
Q 002526 542 LPVGNG-SNPVYLMA--------DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYT 612 (912)
Q Consensus 542 ~p~~~G-snpV~~v~--------~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~ 612 (912)
.++++| ||++|.+. .+|+|..|.+....+.+.+..|.+.+..|.. .-.+++|++++.+.=.
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~---~~~vpVP~v~~~~~d~------- 113 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGE---HTDVPVPKVYCLCTDA------- 113 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhh---cCCCCCCcEEEEecCC-------
Confidence 366777 88999873 4799999877554555667788877777753 2235799998765400
Q ss_pred eccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhH-Hhhc
Q 002526 613 IVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQ-LRDA 691 (912)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~-~~~~ 691 (912)
+ --..||+||++|+|..+.+ .++.
T Consensus 114 ----------~---------------------------------------------v~G~~flVME~v~G~~~~~~~~~~ 138 (822)
T PLN02876 114 ----------S---------------------------------------------VIGTAFYIMEYLEGRIFVDPKLPG 138 (822)
T ss_pred ----------C---------------------------------------------cCCCceEEEEecCCcccCCccCCC
Confidence 0 0127999999999987654 3457
Q ss_pred CCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccH-HHHHHHHHHHHHHHHHHH
Q 002526 692 LSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEW-EIFIRTLARKKKNLVNRL 770 (912)
Q Consensus 692 l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W-~~f~~~l~~~~~~~~~~~ 770 (912)
++.+++..++..++++|+.||+++.+.+... . ...|..| ...+...+++ .....
T Consensus 139 ~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~-----------~-----------~g~~~~~~~~~l~~w~~~---~~~~~ 193 (822)
T PLN02876 139 VAPERRRAIYRATAKVLAALHSADVDAIGLG-----------K-----------YGRRDNYCKRQVERWAKQ---YLAST 193 (822)
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCchhcChh-----------h-----------cCCCCchHHHHHHHHHHH---HHHhh
Confidence 8899999999999999999999976533221 0 0012222 1122222211 11110
Q ss_pred hhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCC
Q 002526 771 TAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGS 850 (912)
Q Consensus 771 ~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (912)
..+..-+...++.+-++|... ++. . .....++++||+|+.++||++.+..
T Consensus 194 -~~~~~~~~~~~~~l~~wL~~~----~P~--~----~~~~~~~~LvHGD~~~~Nvl~~~~~------------------- 243 (822)
T PLN02876 194 -GEGKPPRNPKMLELIDWLREN----IPA--E----DSTGAGTGIVHGDFRIDNLVFHPTE------------------- 243 (822)
T ss_pred -cccCCCCChhHHHHHHHHHhc----CCC--c----cccCCCcceEecCcccccEEEcCCC-------------------
Confidence 111111223345554555321 110 0 0012368999999999999997611
Q ss_pred CCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 851 INGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 851 ~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
=+..+||||+.+.+||+..
T Consensus 244 ------------~~v~aVLDWE~a~~GdPl~ 262 (822)
T PLN02876 244 ------------DRVIGILDWELSTLGNQMC 262 (822)
T ss_pred ------------CeEEEEEeeeccccCChHH
Confidence 2578999999999999976
No 15
>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors. The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.
Probab=99.18 E-value=4.2e-11 Score=132.63 Aligned_cols=104 Identities=26% Similarity=0.469 Sum_probs=68.1
Q ss_pred CcceEEecCCC-CCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCC
Q 002526 250 SYRWVIIGPQR-SGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLAD 328 (912)
Q Consensus 250 d~rwL~IGp~G-SgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~ 328 (912)
...++|++|+| .+...|+|... ++.+|+.|+|+|.|++|...+.... +..++. ....
T Consensus 114 ~~~n~Y~tp~g~~g~~~H~D~~d--vfvlQ~~G~K~W~l~~~~~~~~~~~-------~~~~~~-------------~~~~ 171 (319)
T PF08007_consen 114 VGANAYLTPPGSQGFGPHYDDHD--VFVLQLEGRKRWRLYPPPDEPAPLY-------SDQPFK-------------QLEE 171 (319)
T ss_dssp EEEEEEEETSSBEESECEE-SSE--EEEEEEES-EEEEEE-SCCCTTTSS-------CE--TT-------------TCG-
T ss_pred cceEEEecCCCCCCccCEECCcc--cEEEECCceeEEEECCCCccccccc-------CCCCcc-------------cccc
Confidence 45689999988 58899999985 5999999999999999543322110 111111 1111
Q ss_pred CCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecccCCCCHHHHH
Q 002526 329 DDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVC 376 (912)
Q Consensus 329 a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~~NL~~vl 376 (912)
.....+++|+|||+||||+||||++.+.+.|+++|..|..+ +...++
T Consensus 172 ~~~~~~~~L~pGD~LYlPrG~~H~~~~~~~S~hltv~~~~~-t~~dl~ 218 (319)
T PF08007_consen 172 FEPVEEVVLEPGDVLYLPRGWWHQAVTTDPSLHLTVGFRAP-TWADLL 218 (319)
T ss_dssp -STSEEEEE-TT-EEEE-TT-EEEEEESS-EEEEEEEECCE-BHHHHH
T ss_pred CceeEEEEECCCCEEEECCCccCCCCCCCCceEEEEeeeCC-chhhHH
Confidence 12568999999999999999999999999999999986655 444443
No 16
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=98.99 E-value=1.7e-09 Score=119.85 Aligned_cols=202 Identities=19% Similarity=0.198 Sum_probs=125.7
Q ss_pred cccccC--CCCCceeeecc----cEEEEee-cCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCcee
Q 002526 540 EKLPVG--NGSNPVYLMAD----CVVKIFV-EGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYT 612 (912)
Q Consensus 540 ~~~p~~--~GsnpV~~v~~----~v~K~~~-e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~ 612 (912)
+.++++ .=||++|.+++ +||- -| .+..-.|.|-...|++....|... .+++|..++.=.-.
T Consensus 28 ~~v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~----~vP~p~~~~~~~~~------- 95 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDV----DVPVPRAFGLCGEG------- 95 (321)
T ss_pred ceeeeccCCcccceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCC----CCCCcccccccccC-------
Confidence 445544 33999998886 9999 66 567777888888888666666433 44466554332200
Q ss_pred eccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcC
Q 002526 613 IVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDAL 692 (912)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l 692 (912)
. -.|||.||++++|. .+|+.+
T Consensus 96 -------------------------------------------------------~-~g~pf~v~~~veGe---~~~~~~ 116 (321)
T COG3173 96 -------------------------------------------------------Y-LGTPFYVMEWVEGE---VVWSAL 116 (321)
T ss_pred -------------------------------------------------------C-CCCceEEEEEecce---eccCcC
Confidence 0 23999999999998 566666
Q ss_pred CHHHHH-HHHH-HHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHHHHHHHHHHHHHHHHH
Q 002526 693 SGEDVL-NLAS-FLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRL 770 (912)
Q Consensus 693 ~~~d~~-~la~-~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f~~~l~~~~~~~~~~~ 770 (912)
+..... ..+. .||+.|+.||++|--++... +.++ + .|-+-+.+.......-.
T Consensus 117 ~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~--------g~~~--~----------------~~~rql~~~~~~~~~~~ 170 (321)
T COG3173 117 PPESLGRQFALDALADFLAELHSIDAAGLPDP--------GKPN--A----------------YRGRQLARWDDEYRRAK 170 (321)
T ss_pred CcccchHHHHHHHHHHHHHHHhCCCCcCCCCC--------CccC--c----------------cccchhhHHHHHHHHHH
Confidence 655444 5555 99999999999992222221 0000 0 01122222222221111
Q ss_pred hhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCC
Q 002526 771 TAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGS 850 (912)
Q Consensus 771 ~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (912)
.+-| .-..+++.+..||..+... . ..++||+|+|+..+||++.+.
T Consensus 171 ~~~~--~~~p~~~~~~~Wl~~~~p~--~-----------~~~~~lvHGD~~~gNlii~~~-------------------- 215 (321)
T COG3173 171 KELG--GRIPLADRLIKWLEANRPP--W-----------AGPPVLVHGDYRPGNLIIDPG-------------------- 215 (321)
T ss_pred Hhcc--CCCchHHHHHHHHHhcCCC--c-----------CCCceeeeCCcccCCEEEeCC--------------------
Confidence 2233 2333455566677542111 1 469999999999999999871
Q ss_pred CCCCCCcCcCcceeeeeeeecCCCCCcchhh-hccee
Q 002526 851 INGYDEFGEAKSWHCSHIIDFSNLSIGKCFL-LNSIC 886 (912)
Q Consensus 851 ~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~-~~~~~ 886 (912)
+++++|||+=+.+||++. |+-+|
T Consensus 216 -------------~~~gVlDwe~~~lGDP~~Dl~~~~ 239 (321)
T COG3173 216 -------------RPTGVLDWELATLGDPLEDLAIIC 239 (321)
T ss_pred -------------CeeEEEeccccccCCcHHHHHHHH
Confidence 239999999999999986 55555
No 17
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.98 E-value=6.8e-09 Score=111.92 Aligned_cols=204 Identities=20% Similarity=0.190 Sum_probs=123.9
Q ss_pred HHHHHHHhhcCCCCCccccccccCCC-CCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCccccc
Q 002526 522 ELLEEICNFHKLPTLTAEEKLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIP 596 (912)
Q Consensus 522 ~~~~~i~~~~~l~~~~~~~~~p~~~G-snpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P 596 (912)
..++.|++..++..+.. --|+.+| +|-+|.+. .+|||+++. . +...+..|.++...|.+.+ .++|
T Consensus 2 ~~l~~~l~~y~~~~~~~--i~~i~~G~~n~~y~v~~~~~~~vLr~~~~-~---~~~~~~~e~~~l~~L~~~g----~~vp 71 (296)
T cd05153 2 EELASFLADYDLGELLS--FEGISAGIENTNYFVTTDSGRYVLTLFEK-V---SAEELPFFLALLDHLAERG----LPVP 71 (296)
T ss_pred HHHHHHHHHcCCCchhh--eecccCccccceEEEEeCCCcEEEEEcCC-C---ChHhccHHHHHHHHHHHCC----CCCC
Confidence 45788999999744422 2377777 59999873 799999986 2 2223557888888886543 3477
Q ss_pred ceeeeeeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEE
Q 002526 597 DVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYII 676 (912)
Q Consensus 597 ~~la~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv 676 (912)
+++.+.. |.+-+ . -..++|+|
T Consensus 72 ~~i~~~~-----g~~~~-~-----------------------------------------------------~~~~~~~l 92 (296)
T cd05153 72 RPIADRD-----GEYLS-E-----------------------------------------------------LAGKPAAL 92 (296)
T ss_pred ccccCCC-----CcEee-e-----------------------------------------------------eCCceEEE
Confidence 7776432 11000 0 01278999
Q ss_pred EeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHHH
Q 002526 677 TKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFI 756 (912)
Q Consensus 677 ~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f~ 756 (912)
+++++|..+.. ++. ..+..+|+.|+.||.++.. ..... .......|....
T Consensus 93 ~~~i~G~~~~~----~~~----~~~~~lg~~La~lH~~~~~-~~~~~---------------------~~~~~~~~~~~~ 142 (296)
T cd05153 93 VEFLAGEHLTR----PTA----AHCRQIGEALARLHLAAQS-FPGER---------------------NNLRGLAWIREL 142 (296)
T ss_pred EEeCCCCCCCC----CCH----HHHHHHHHHHHHHHHHhcc-CCccC---------------------CCcCCcHHHHHH
Confidence 99999998765 332 4677899999999998632 11100 011234554432
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCC
Q 002526 757 RTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRS 836 (912)
Q Consensus 757 ~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~ 836 (912)
.. .+ ...+.+.+.+.+++.+-. +... .....+.+++|+|+++.||++..
T Consensus 143 ~~------~~-------~~~l~~~~~~~~~~~~~~-l~~~----------~~~~~~~~l~HgD~~~~Nil~~~------- 191 (296)
T cd05153 143 GK------DL-------LPLLSAEDRALLADELAR-QDAF----------DPSDLPRGVIHADLFRDNVLFDG------- 191 (296)
T ss_pred HH------Hh-------ccccCHHHHHHHHHHHHH-HHhh----------hhhcCCCcCCccCcCcccEEEeC-------
Confidence 11 00 111233444444333310 0111 01135778999999999999955
Q ss_pred CCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 837 NGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
-+.++||||+++..|++..
T Consensus 192 --------------------------~~~~~iIDfe~a~~g~~~~ 210 (296)
T cd05153 192 --------------------------DELSGVIDFYFACTDAFLY 210 (296)
T ss_pred --------------------------CceEEEeehhhhcCchHHH
Confidence 1457999999999999653
No 18
>KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription]
Probab=98.96 E-value=5.7e-11 Score=140.80 Aligned_cols=243 Identities=22% Similarity=0.410 Sum_probs=149.7
Q ss_pred CCHHHHHHHh-ccCCcccccccCCCccccCCcHHHHHHHhCCeeEEEEecCCc----eEEee-HHHHHHHHhhcC---CC
Q 002526 138 VTREEFDREC-AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRISQRSVR----SISMK-FKDYVAYMNVQH---DE 208 (912)
Q Consensus 138 LS~eeF~e~y-~nkPVIItG~~~~WPA~~kWT~dyL~e~~GD~~V~V~~~s~~----~~~mt-f~dFldyl~~~~---de 208 (912)
-....|++.+ .++|||++|+.+.-.. ..|.++.|...||+..+.+...... ...|. |-+|++.+.... .+
T Consensus 528 ~n~~~FQEhWkqGqPViVs~V~~~l~g-~lW~P~a~~~~~g~q~~~l~n~~~~~i~s~d~~~~fwegFe~~~kr~~~~~g 606 (889)
T KOG1356|consen 528 NNLKHFQEHWKQGQPVIVSGVHKKLNG-LLWKPEALSRAFGDQVVDLSNCNNSQIISNDCVDNFWEGFEGYSKRLKSENG 606 (889)
T ss_pred hHHHHHHHHHhcCCcEEehHhhhhccc-cccchHHHHHHhccchhhhhcCCCCCccccchhhhHHHhhcccccCcccccC
Confidence 3467899999 9999999999987554 5899999999999988776553221 11222 555555443221 23
Q ss_pred CC--eEEeccccccc----hh----hhhhccCCCCccc-cchhc---ccCC-CCCCCc---ceEEe------cCCCCCCc
Q 002526 209 DP--LYIFDYKFGEN----AQ----GLLEDYRVPDLFQ-EDLFN---VLDG-DMRPSY---RWVII------GPQRSGAS 264 (912)
Q Consensus 209 ~p--lYLfD~~f~e~----~P----~L~~Dy~vP~~F~-eDlf~---~L~~-~~RPd~---rwL~I------Gp~GSgTp 264 (912)
.| |-|.||.-++. +| +|...+++|+|.. +..++ .|++ -.+||. .|.-. |-..+.|.
T Consensus 607 ~p~vLKLKDWpp~~~Fkd~lP~r~eell~sLPlpEYt~r~G~LNlAs~LP~~fv~PDLGPk~y~AYG~~~e~gr~~gtTn 686 (889)
T KOG1356|consen 607 WPEVLKLKDWPPGEDFKDMLPRRFEELLASLPLPEYTDRDGKLNLASKLPEGFVRPDLGPKLYNAYGVSTELGRGDGTTN 686 (889)
T ss_pred CeeEEeecCCCchHhHhhhhhHHHHHHHHcCCchhhhcCCCccchHhhCcccccCCCCCchhhhhccccccccCCCCcee
Confidence 34 56778853332 33 4666677887753 22232 3332 234542 12222 22356789
Q ss_pred cccCCCCCcccEEEEE--------------------e-------------E----EEEEEeCCCCCCCccee--eecCCC
Q 002526 265 WHVDPALTSAWNTLLC--------------------G-------------R----KRWALYPPGRVPLGVTV--HVNEDD 305 (912)
Q Consensus 265 lH~Dp~~TsawnaqI~--------------------G-------------r----KrWiLfPP~~~p~gv~~--~~~~~~ 305 (912)
||.|.. .+.|++++ | . -.|-+|...++|....+ ....+.
T Consensus 687 LH~dvS--DaVNILvyv~e~~~~~~~~~~~~k~~~~~~~de~~~~~~~~~~e~~GALWhIF~~~Dv~KireyL~k~~~E~ 764 (889)
T KOG1356|consen 687 LHLDVS--DAVNILVYVGEPPGQIEQIAKVLKKIQEGDLDEITRSRISSVSETPGALWHIFRAQDVPKIREYLRKVCKEQ 764 (889)
T ss_pred eceehh--hhhhheeeeccCCchHHhHHHHHHhhhhcchhhhhhhhccccccCCcchhhhhhhcchHHHHHHHHHhhHHh
Confidence 999996 46777776 1 1 23555555555432110 011111
Q ss_pred C-Cc-cCCCCcc-hhhhhhcCCC--CCC--CCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecccCCCCHHHHHHh
Q 002526 306 G-DV-NIETPSS-LEWWLDFYPL--LAD--DDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVCLD 378 (912)
Q Consensus 306 s-~V-dv~sPds-leW~l~~yP~--l~~--a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~~NL~~vl~d 378 (912)
+ .+ .+.+|.. -.||++.|-+ |.+ ...++.++|..||++|||+|-.|||+|+-.||.|+..||++.|+..- ..
T Consensus 765 ~~~~~~v~hPIhDQS~YLd~~lr~RLkeEyGVe~WtfvQ~LGdAVfIPAGaPHQVrNLkSCikVa~DFVSPE~v~ec-~r 843 (889)
T KOG1356|consen 765 GHEVPKVHHPIHDQSWYLDRYLRRRLKEEYGVEPWTFVQFLGDAVFIPAGAPHQVRNLKSCIKVAEDFVSPEHVSEC-FR 843 (889)
T ss_pred cCCCCcccCCCcccceeccHHHHHHHHHHhCCCccchhhcccceEEecCCCcHHhhhhhhHHHHHHhhCChhhHHHH-HH
Confidence 1 11 1233421 2477665422 111 14789999999999999999999999999999999999999999884 44
Q ss_pred hccCcc
Q 002526 379 FAPGYR 384 (912)
Q Consensus 379 l~~gf~ 384 (912)
|...|+
T Consensus 844 LT~EfR 849 (889)
T KOG1356|consen 844 LTQEFR 849 (889)
T ss_pred HHHHHh
Confidence 444443
No 19
>KOG2997 consensus F-box protein FBX9 [General function prediction only]
Probab=98.95 E-value=3.2e-10 Score=123.11 Aligned_cols=71 Identities=27% Similarity=0.489 Sum_probs=61.9
Q ss_pred cCCCCCCCCHHHHHHHHh-----cCCHHHHHHHHHHhHHHHHHccChhhHHHHHHhhcCCC----------ccccCccce
Q 002526 17 ALGDLKIIPDEIICSILE-----HLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKASGV----------LQYKGSWKK 81 (912)
Q Consensus 17 ~LG~l~~LPDElLl~ILs-----~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~~~~----------~~~~gSWR~ 81 (912)
.+-+++.||||+|+.||. .||.++|.++++|||.||.+|++|++||..|++.|+.. -.+.+|||+
T Consensus 103 ~~~~~~~LPdEvLm~I~~~vv~~~~d~rsL~~~s~vCr~F~~~~R~~~lwR~aC~KvW~~s~~~ln~~~~~sky~~SWR~ 182 (366)
T KOG2997|consen 103 ELISISVLPDEVLMRIFRWVVSSLLDLRSLEQLSLVCRGFYKCARDPELWRLACLKVWQRSCIKLNPKILQSKYYTSWRE 182 (366)
T ss_pred hhhhhhhCCHHHHHHHHHHHHhhhcchhhHHHhHhhHHHHHHHHcChHHHHHHHHHHHHHhhhccchhhhhhHHHhHHHH
Confidence 344578999999999995 67899999999999999999999999999999999531 246899999
Q ss_pred eecccC
Q 002526 82 TALHLE 87 (912)
Q Consensus 82 Tyl~~~ 87 (912)
|++.+.
T Consensus 183 Mfl~Rp 188 (366)
T KOG2997|consen 183 MFLERP 188 (366)
T ss_pred HHhhCc
Confidence 999874
No 20
>PRK10593 hypothetical protein; Provisional
Probab=98.85 E-value=6.4e-08 Score=106.22 Aligned_cols=181 Identities=14% Similarity=0.123 Sum_probs=110.2
Q ss_pred cccccC-CCCCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeec
Q 002526 540 EKLPVG-NGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIV 614 (912)
Q Consensus 540 ~~~p~~-~GsnpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~ 614 (912)
+.-|++ ..++-||.+. .+|||++........ +..|.+....|++.+ .+++|+|++.|...
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~---~~~Ea~~L~~L~~~~---~vpVP~V~~~~~~~--------- 82 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGNPMPLMARSFSTPGV---AQQEAWKLSMLARSG---TVRMPTVYGVMTHE--------- 82 (297)
T ss_pred eeeecCCccceeEEEEEcCCCCEEEEEecccccchH---HHHHHHHHHHHccCC---CCCcCcEEEEeccC---------
Confidence 334666 4567899875 368899765312212 347887777775432 46799999887632
Q ss_pred cCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcCCH
Q 002526 615 PWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSG 694 (912)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l~~ 694 (912)
....-+||||++++|..+.+. .++.
T Consensus 83 -----------------------------------------------------~~~g~~~LVmE~i~G~~~~~~--~~~~ 107 (297)
T PRK10593 83 -----------------------------------------------------QSPGPDVLLLERLRGVSVEAP--ARTP 107 (297)
T ss_pred -----------------------------------------------------CcCCCeEEEEeccCCEecCCC--CCCH
Confidence 011258999999999888773 4667
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHHHHHHHHHHHHHH---HHHh
Q 002526 695 EDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLV---NRLT 771 (912)
Q Consensus 695 ~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f~~~l~~~~~~~~---~~~~ 771 (912)
++...++..+|++++.||+++...... .. +.. ....|..|.+ +|+.-.. +...
T Consensus 108 ~~~~~l~~~l~~~La~LH~~~~~g~~g-------------------~~-~~~-~~~~w~~f~~---~rl~~~~~~~~~~~ 163 (297)
T PRK10593 108 ERWEQLKDQIVEGLLAWHRIDSRGCVG-------------------AV-DST-QENLWPSWYQ---QRVEVLWTTLNQFN 163 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhccc-------------------CC-CCc-ccccHHHHHH---HHHHHHHhhhhhcc
Confidence 788899999999999999986322111 00 011 3567887762 2222111 2222
Q ss_pred hcCCCCCHhH---HhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 772 AWGHPIPKAL---IDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 772 ~wg~~lp~~l---~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
..| +++.. ++.+.+-+|. .| +. ...+|+++|||+.++||++.+
T Consensus 164 ~~~--l~~~~~~~~~~l~~~l~~---~L-~~---------~~~~psLlHGDlw~gNvl~~~ 209 (297)
T PRK10593 164 NTG--LTMQDRRILFRTRECLPA---LF-EG---------FNDNCVLVHGNFTLRSMLKDP 209 (297)
T ss_pred ccC--CChhHHHHHHHHHHhchh---hh-cc---------CCCCCeeEeCCCCcccEEECC
Confidence 332 32222 2222223332 11 10 134689999999999999965
No 21
>KOG1633 consensus F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains [Chromatin structure and dynamics]
Probab=98.85 E-value=1.2e-08 Score=123.63 Aligned_cols=219 Identities=23% Similarity=0.426 Sum_probs=141.2
Q ss_pred HHHHHHh-ccCCccccccc---CCCccccCCcHHHHHHHhC-CeeEEEEec-CCceEEeeHHHHHHHHhhcCCCCCeE-E
Q 002526 141 EEFDREC-AEEPILLSGLA---DTWPARNTWTIDQLLTRYG-DTAFRISQR-SVRSISMKFKDYVAYMNVQHDEDPLY-I 213 (912)
Q Consensus 141 eeF~e~y-~nkPVIItG~~---~~WPA~~kWT~dyL~e~~G-D~~V~V~~~-s~~~~~mtf~dFldyl~~~~de~plY-L 213 (912)
-+|.++- .+.|.++++-. ..-|.- ..|...-..-.| ++.+.|.+. .....+|++.+|++|+.....+ ++| +
T Consensus 8 ~ef~~~~~~~~p~~~~~~~~lg~~~p~p-~f~v~dv~~~vg~~r~~~v~dv~~q~~~km~~~~~~~yy~~~~~~-R~yNV 85 (776)
T KOG1633|consen 8 VEFLQDNGLRVPILFRNKDGLGMTLPSP-DFTVNDVKELVGSDRMIDVVDVNTQKDCKMTLKEFVKYYSSPQRK-RLYNV 85 (776)
T ss_pred chhhhhcccccchhhccCCCccccCCCC-CcchhhhHHhhCCCccceeeeeeccccccccHHHHhhhhcCcchh-hhhhe
Confidence 4677777 88888887622 122322 455555555566 555554432 2256899999999998765432 344 2
Q ss_pred eccccccchhhhhhccCCCCccc-cchhc-ccCC---CCCCC-cceEEecCCCCCCccccCCCCCcccEEEEEeEEEEEE
Q 002526 214 FDYKFGENAQGLLEDYRVPDLFQ-EDLFN-VLDG---DMRPS-YRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWAL 287 (912)
Q Consensus 214 fD~~f~e~~P~L~~Dy~vP~~F~-eDlf~-~L~~---~~RPd-~rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiL 287 (912)
-.-.|... .|..-...|+... =||-+ +.+. ...|. ..+..|+..++.|.+|.|+.++++|+-.+.|.|.+.|
T Consensus 86 isLEfS~T--rl~~~V~~P~ivr~ldwV~n~wP~~~~~~~P~vqkyclmsv~~~Ytdfhidfggtsvwyhil~G~K~f~l 163 (776)
T KOG1633|consen 86 ISLEFSDT--RLSNLVESPEIVRKLDWVDNQWPDDLKMEYPKVQKYCLMSVKDSYTDFHIDFGGTSVWYHILAGEKTFYL 163 (776)
T ss_pred eccccCcc--hHHhcCCCchhhhhhhchhccCCchhcccccccccceeeeccccccccccCCCCcchhhhhhccccceee
Confidence 22222211 1222233343321 01111 0110 12333 3578899999999999999999999999999999999
Q ss_pred eCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeeccc
Q 002526 288 YPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFV 367 (912)
Q Consensus 288 fPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv 367 (912)
.||......++.... +.. +.+ .-+|...- ..++.|++++|+++|||+||-|.|+.-.+|+++..||.
T Consensus 164 I~pt~~nl~~ye~w~---~s~----~q~----~~ffGd~V--dkC~~~~l~~g~T~~iPsGwIhAV~Tp~d~l~fgGnfl 230 (776)
T KOG1633|consen 164 IPPTCENLELYECWE---SST----PQD----EIFFGDCV--DKCYKCILKQGQTLFIPSGWIHAVLTPTDCLVFGGNFL 230 (776)
T ss_pred eCCcccchhhhhhhh---hcc----ccc----ccccCCcc--ceeEEEEeccCceEecccceeEeeecCcchheeccchh
Confidence 999987654443221 111 000 12333322 36899999999999999999999999999999999999
Q ss_pred CCCCHHHHH
Q 002526 368 DSKNFEFVC 376 (912)
Q Consensus 368 ~~~NL~~vl 376 (912)
..-++...+
T Consensus 231 hsl~i~~QL 239 (776)
T KOG1633|consen 231 HSLTIEMQL 239 (776)
T ss_pred hhhhhHHHH
Confidence 888877765
No 22
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B.
Probab=98.85 E-value=1.7e-09 Score=87.03 Aligned_cols=47 Identities=38% Similarity=0.709 Sum_probs=41.1
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHHh
Q 002526 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLK 67 (912)
Q Consensus 21 l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~ 67 (912)
+..||+|++.+||++|++.||.++++|||.||.++.++.|||.+|++
T Consensus 1 i~~LP~Eil~~If~~L~~~dl~~~~~vcr~w~~~~~~~~lW~~~~~r 47 (47)
T PF12937_consen 1 ISSLPDEILLEIFSYLDPRDLLRLSLVCRRWRRIANDNSLWRRLCLR 47 (47)
T ss_dssp CCCS-HHHHHHHHTTS-HHHHHHHTTSSHHHHHHHTCCCHHHHHC--
T ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCChhhhhhhccC
Confidence 35799999999999999999999999999999999999999999875
No 23
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.73 E-value=2.2e-07 Score=101.59 Aligned_cols=205 Identities=19% Similarity=0.190 Sum_probs=120.8
Q ss_pred HHHHHHHhhcCCCCCcccccc-ccCCCC-Cceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccc
Q 002526 522 ELLEEICNFHKLPTLTAEEKL-PVGNGS-NPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYI 595 (912)
Q Consensus 522 ~~~~~i~~~~~l~~~~~~~~~-p~~~Gs-npV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~ 595 (912)
..|.+++..+++..+ ... |++.|. |-||.+. .+|+|++-..... ..+..|++++.-|.+.+ .++
T Consensus 10 ~~l~~~l~~y~~~~~---~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~---~~i~~e~~~l~~L~~~g----~pv 79 (307)
T TIGR00938 10 EEMSSFLDGYDLGEL---LSLKGIAEGVENSNYLLTTDVGRYILTLYEKRVKA---EELPFFLALTTHLAARG----LPV 79 (307)
T ss_pred HHHHHHHHhcCCCCc---eeccccCCccccceEEEEeCCCcEEEEEecCCCCH---HHHHHHHHHHHHHHHCC----CCC
Confidence 346667777777654 434 778885 8999874 8999998753211 12346777777775443 237
Q ss_pred cceeeeee--eeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCc
Q 002526 596 PDVLASGI--LYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWP 673 (912)
Q Consensus 596 P~~la~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Wp 673 (912)
|+++.+.. .. . + -...+
T Consensus 80 p~~i~t~~g~~~------~----------------------------------------------------~---~~g~~ 98 (307)
T TIGR00938 80 PKPVKSRDGRQL------S----------------------------------------------------T---LAGKP 98 (307)
T ss_pred CccccCCCCCee------h----------------------------------------------------h---cCCeE
Confidence 88877543 11 0 0 01268
Q ss_pred eEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHH
Q 002526 674 YIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWE 753 (912)
Q Consensus 674 Yiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 753 (912)
|++|++++|..+.. .+ ...+..+|+.|+.||.... ...... + .......|.
T Consensus 99 ~~l~e~i~G~~~~~----~~----~~~~~~~G~~LA~lH~~~~-~~~~~~------------~--------~~~~~~~w~ 149 (307)
T TIGR00938 99 ACLVEFLQGLSVGR----PT----AMHCRPVGEVLAWMHLAGA-HFPENR------------K--------NSLRLEAWH 149 (307)
T ss_pred EEEEEeCCCCCCCC----CC----HHHHHHHHHHHHHHHhhhc-cCCCCC------------C--------CCCChHHHH
Confidence 99999999987653 12 2357899999999998752 111100 0 000235677
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccc
Q 002526 754 IFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCAS 833 (912)
Q Consensus 754 ~f~~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~ 833 (912)
.+... ++ .... .+.+.....++.++.. +..... ...+.+++|+|+.+.||++.+
T Consensus 150 ~~~~~---~~-~~~~-------~l~~~~~~~l~~~~~~-l~~~~~----------~~~~~~l~HgD~~~~Nvl~~~---- 203 (307)
T TIGR00938 150 ILAEK---CF-EAAP-------QLEAHMGAELDKELDY-LDKFWP----------RDLPRGVIHADLFPDNVLFDG---- 203 (307)
T ss_pred HHHHh---hh-hccc-------ccCHHHHHHHHHHHHH-HHhhhh----------hcCCCccCCCCCCcCcEEEEC----
Confidence 66532 11 1110 1232222222222210 011111 135789999999999999965
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 834 SRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
+ ...+||||+++.+|++..
T Consensus 204 -------------------------~----~~~~vIDfd~~~~~~~~~ 222 (307)
T TIGR00938 204 -------------------------D----SVKGVIDFYFACTDARAY 222 (307)
T ss_pred -------------------------C----ceEEEeecccccCcchHH
Confidence 1 257999999999999754
No 24
>PRK11768 serine/threonine protein kinase; Provisional
Probab=98.69 E-value=3e-07 Score=102.09 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=76.3
Q ss_pred HHHHHhhcCCCCCccccccccCCCCCceeeec-----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccce
Q 002526 524 LEEICNFHKLPTLTAEEKLPVGNGSNPVYLMA-----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDV 598 (912)
Q Consensus 524 ~~~i~~~~~l~~~~~~~~~p~~~GsnpV~~v~-----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~ 598 (912)
+.+.|...|+... ...++++++.|-||.|. .+|+|+|-++. .+.-.+-.|+++..-|.+.+ +++..| +
T Consensus 16 ~~~a~~~~g~~~~--~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~~--~~~~~i~~E~~~l~~L~~~g--ipv~~p-~ 88 (325)
T PRK11768 16 ILDALESLGLRVD--GRLLALNSYENRVYQFGDEDGRRVVAKFYRPER--WSDAQILEEHAFALELAEAE--IPVVAP-L 88 (325)
T ss_pred HHHHHHHcCCCCc--cceEeeccccceEEEEecCCCCEEEEEEcCccc--CCHHHHHHHHHHHHHHHHCC--CCCCCC-c
Confidence 4455666788542 24468999999999985 39999996442 23333557998888886543 444445 3
Q ss_pred eeeeeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEe
Q 002526 599 LASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITK 678 (912)
Q Consensus 599 la~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~ 678 (912)
-..|..... + ..++|.++.
T Consensus 89 ~~~G~~~~~------------------------------------------~-------------------~g~~~~l~~ 107 (325)
T PRK11768 89 AFNGQTLHE------------------------------------------H-------------------QGFRFALFP 107 (325)
T ss_pred cCCCCEEEE------------------------------------------E-------------------CCEEEEEEe
Confidence 334432100 0 027889999
Q ss_pred ecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 679 RCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 679 r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
+++|..... -+ ......||+.|+.||.+..+
T Consensus 108 ~~~G~~~~~----~~----~~~~~~lG~~LarlH~~~~~ 138 (325)
T PRK11768 108 RRGGRAPEL----DN----LDQLEWVGRFLGRIHQVGAK 138 (325)
T ss_pred eeCCCCCCC----CC----HHHHHHHHHHHHHHHhhccC
Confidence 999976532 12 23457899999999998653
No 25
>KOG3706 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=2.9e-08 Score=112.16 Aligned_cols=112 Identities=24% Similarity=0.302 Sum_probs=74.9
Q ss_pred ceEEecCCCC-CCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCC
Q 002526 252 RWVIIGPQRS-GASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDD 330 (912)
Q Consensus 252 rwL~IGp~GS-gTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~ 330 (912)
.++|+.|+|| |-+.|||-- .++..||.|||+|+||.|...-...+. .++-||+.-+ +. .
T Consensus 319 aNvYLTPagSqGfaPHyDdI--eaFvlQvEGrK~Wrly~P~~~~eel~l-----~sS~Nf~eed-----------lg--e 378 (629)
T KOG3706|consen 319 ANVYLTPAGSQGFAPHYDDI--EAFVLQVEGRKHWRLYHPTVPLEELAL-----VSSDNFTEED-----------LG--E 378 (629)
T ss_pred cceeecCCCCCCCCCchhhh--hhhhheeccceeeEeecCCCcHhhhhh-----ccCCCCChhH-----------hC--C
Confidence 4689999888 789999976 479999999999999998753211111 1111333221 11 3
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEeCC--CcEEEeecccCCCCHHHHHHhhccCc
Q 002526 331 KPIECTQLPGETIVVPSGWWHCILNLE--TTIAVTQNFVDSKNFEFVCLDFAPGY 383 (912)
Q Consensus 331 ~~~E~vLePGDvLFVPsGWWHqV~NLd--dSIAVn~NFv~~~NL~~vl~dl~~gf 383 (912)
+.++.+++|||+||+|.|..||+..-+ .|.-||..---...+.+++.+++++-
T Consensus 379 PV~e~vle~GDllYfPRG~IHQA~t~~~vHSlHvTlStyqq~s~anlle~~ip~a 433 (629)
T KOG3706|consen 379 PVHEFVLEPGDLLYFPRGTIHQADTPALVHSLHVTLSTYQQNSWANLLEDTIPGA 433 (629)
T ss_pred chHHhhcCCCcEEEecCcceeeccccchhceeEEEeehhhhhhHHHHHHHHHHHH
Confidence 568999999999999999999987654 34444433223344566666666543
No 26
>PRK05231 homoserine kinase; Provisional
Probab=98.59 E-value=1.3e-06 Score=95.66 Aligned_cols=113 Identities=19% Similarity=0.137 Sum_probs=68.3
Q ss_pred HHHHHhhcCCCCCccccccccCCCC-Cceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccce
Q 002526 524 LEEICNFHKLPTLTAEEKLPVGNGS-NPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDV 598 (912)
Q Consensus 524 ~~~i~~~~~l~~~~~~~~~p~~~Gs-npV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~ 598 (912)
++++++.+++..++. --|+.+|. |-+|.|. .+|||+|. .... -.+..|.++..-|.+. ..++|++
T Consensus 12 l~~~l~~y~~~~~~~--~~~l~~G~~n~~y~v~t~~g~~vLK~~~-~~~~---~~l~~~~~~l~~L~~~----glpvP~~ 81 (319)
T PRK05231 12 LAAFLAPYDLGELLS--LKGIAEGIENSNFFLTTTQGEYVLTLFE-RLTA---EDLPFFLGLMQHLAAR----GVPVPAP 81 (319)
T ss_pred HHHHHHhcCCchhhc--cchhccccccceEEEEeCCCcEEEEEec-cCCh---HHhHHHHHHHHHHHHC----CCCCCcc
Confidence 455666677733322 22555555 8899874 79999986 2111 1233466666666543 2347888
Q ss_pred eeee--eeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEE
Q 002526 599 LASG--ILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYII 676 (912)
Q Consensus 599 la~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv 676 (912)
+.+. ... .. -...||++
T Consensus 82 i~~~~G~~~------~~-------------------------------------------------------~~g~~~~l 100 (319)
T PRK05231 82 VARRDGAAL------GE-------------------------------------------------------LAGKPAAI 100 (319)
T ss_pred eeCCCCCEe------ee-------------------------------------------------------eCCEEEEE
Confidence 7652 211 00 01268999
Q ss_pred EeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 002526 677 TKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLP 715 (912)
Q Consensus 677 ~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp 715 (912)
+++++|..... .+. ..+..+|+.|+.||...
T Consensus 101 ~~~l~G~~~~~----~~~----~~~~~~G~~LA~lH~~~ 131 (319)
T PRK05231 101 VTFLEGKWPRA----PTA----AHCAEVGEMLARMHLAG 131 (319)
T ss_pred EEecCCCCCCC----CCH----HHHHHHHHHHHHHHhhh
Confidence 99999986532 222 33578999999999875
No 27
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.57 E-value=3.5e-07 Score=89.69 Aligned_cols=94 Identities=23% Similarity=0.219 Sum_probs=64.5
Q ss_pred ccCCC-CCceeeec----ccEEEEeecCC-ccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccC
Q 002526 543 PVGNG-SNPVYLMA----DCVVKIFVEGG-FESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPW 616 (912)
Q Consensus 543 p~~~G-snpV~~v~----~~v~K~~~e~g-~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~ 616 (912)
|++.| +|-||.+. .+|||++..+. ...+ .-.|.+.+..|.+. ..+|+++..+.
T Consensus 5 ~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~---~~~E~~~l~~l~~~-----~~~P~~~~~~~------------- 63 (170)
T cd05151 5 PLKGGMTNKNYRVEVANKKYVVRIPGNGTELLIN---RENEAENSKLAAEA-----GIGPKLYYFDP------------- 63 (170)
T ss_pred ecCCcccCceEEEEECCeEEEEEeCCCCcccccC---HHHHHHHHHHHHHh-----CCCCceEEEeC-------------
Confidence 55656 77899764 79999998553 2222 45789888888653 24788876432
Q ss_pred CCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcCCHHH
Q 002526 617 DGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGED 696 (912)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l~~~d 696 (912)
+ . .|+||++++|..+.+. +..
T Consensus 64 ----------------------------------~-----------------~---~~lv~e~i~G~~l~~~-~~~---- 84 (170)
T cd05151 64 ----------------------------------E-----------------T---GVLITEFIEGSELLTE-DFS---- 84 (170)
T ss_pred ----------------------------------C-----------------C---CeEEEEecCCCccccc-ccc----
Confidence 0 1 3799999999887654 111
Q ss_pred HHHHHHHHHHHHHhhcccCC
Q 002526 697 VLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 697 ~~~la~~lg~~~~~lH~lp~ 716 (912)
...++..+|+.|+.||..+.
T Consensus 85 ~~~~~~~l~~~l~~LH~~~~ 104 (170)
T cd05151 85 DPENLEKIAKLLKKLHSSPL 104 (170)
T ss_pred CHHHHHHHHHHHHHHhCCCC
Confidence 23456789999999999853
No 28
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.49 E-value=9.2e-07 Score=94.05 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=28.5
Q ss_pred eEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 674 YIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 674 Yiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
++||++++|..+..- +... ...+..+++.|+.||++|.+
T Consensus 64 ~~v~e~i~G~~~~~~-~~~~----~~~~~~la~~l~~lH~~~~~ 102 (256)
T TIGR02721 64 WLLVEWLEGEVITLD-QFVA----LDLLLELAALLHQLHSQPRF 102 (256)
T ss_pred EEEEEeccCcccccc-cccC----chhHHHHHHHHHHHhCCCCC
Confidence 589999999876542 1111 23568899999999999864
No 29
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.32 E-value=4e-06 Score=87.41 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=28.5
Q ss_pred EEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 675 IITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 675 iv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+||++++|..+... .+. ...++..+|++|+.||.++.+.
T Consensus 69 ~l~e~i~G~~l~~~--~~~---~~~~~~~la~~l~~lH~~~~~~ 107 (235)
T cd05157 69 LIYEFIPGRTLEPE--DLR---NPKIYRLIARELAKLHSIKPPE 107 (235)
T ss_pred EEEEeeCCCcCCHH--Hcc---ChHHHHHHHHHHHHHhcccccc
Confidence 79999999765432 111 1346788999999999998653
No 30
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.27 E-value=9.1e-06 Score=75.93 Aligned_cols=94 Identities=33% Similarity=0.437 Sum_probs=69.9
Q ss_pred CCCCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccCCCCCc
Q 002526 546 NGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDGKGV 621 (912)
Q Consensus 546 ~GsnpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~~~~~~ 621 (912)
.+.+-||.+. .+|||.+..... ...+-.|.+++..|... ..++|+++....-.
T Consensus 9 g~~~~v~~~~~~~~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~---------------- 65 (155)
T cd05120 9 GLTNRVYLLGTKDEDYVLKINPSREK---GADREREVAILQLLARK----GLPVPKVLASGESD---------------- 65 (155)
T ss_pred ccccceEEEEecCCeEEEEecCCCCc---hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCC----------------
Confidence 3466777555 789999874432 22355799888888654 45688887655411
Q ss_pred ccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcCCHHHHHHHH
Q 002526 622 LDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDVLNLA 701 (912)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l~~~d~~~la 701 (912)
..+|++|++++|..+... +......++
T Consensus 66 -------------------------------------------------~~~~~v~e~~~g~~~~~~----~~~~~~~~~ 92 (155)
T cd05120 66 -------------------------------------------------GWSYLLMEWIEGETLDEV----SEEEKEDIA 92 (155)
T ss_pred -------------------------------------------------CccEEEEEecCCeecccC----CHHHHHHHH
Confidence 268999999999888766 777888999
Q ss_pred HHHHHHHHhhcccC
Q 002526 702 SFLGEQLRNLHLLP 715 (912)
Q Consensus 702 ~~lg~~~~~lH~lp 715 (912)
..+++.++.||.+.
T Consensus 93 ~~~~~~l~~lh~~~ 106 (155)
T cd05120 93 EQLAELLAKLHQLP 106 (155)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999873
No 31
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=98.20 E-value=2.9e-05 Score=87.09 Aligned_cols=209 Identities=21% Similarity=0.233 Sum_probs=124.2
Q ss_pred HHHhhcCCCCCccccccccCCCCCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeee
Q 002526 526 EICNFHKLPTLTAEEKLPVGNGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLAS 601 (912)
Q Consensus 526 ~i~~~~~l~~~~~~~~~p~~~GsnpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~ 601 (912)
......++.... ...++++..|=||.|. .+|||||..+-...- +--|+++..-|.+.+-++..++|.+ +
T Consensus 18 ~~l~~~~~g~~~--~~~~l~s~eN~~f~~~~~~g~~iLki~~~~~~~~~---i~~el~~l~~La~~~i~v~~Pl~~~--d 90 (331)
T COG2334 18 AALEAYHYGLDG--SLRGLNSEENSNFRVQTEDGRYILKIYRPGWTRAE---IPFELALLQHLAERGIPVPAPLPSL--D 90 (331)
T ss_pred HHHHhcCcCccc--cccccccccCceEEEEecCCCeEEEEecCCCCHHH---HHHHHHHHHHHHHcCCCCCCCccCC--C
Confidence 333444444432 3446667999999886 899999997622222 3458888888877777766555443 4
Q ss_pred eeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecC
Q 002526 602 GILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCK 681 (912)
Q Consensus 602 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~ 681 (912)
|... + .++.. ..++-|-++++
T Consensus 91 G~~l---------------------------------------------~-------------~~~~~-~r~a~lf~~l~ 111 (331)
T COG2334 91 GELL---------------------------------------------E-------------ALSGG-PRPAALFEYLP 111 (331)
T ss_pred cchh---------------------------------------------h-------------hccCC-ceeEEEEEecC
Confidence 4422 0 01112 58999999999
Q ss_pred CCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccC------CCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHH
Q 002526 682 GKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLP------CPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIF 755 (912)
Q Consensus 682 G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f 755 (912)
|..+.+ ..+.+ ...-+|+.|+.||+.- .|+.. ...+|..
T Consensus 112 G~~~~~---~~~~~----~~~~lG~~LgrlH~a~~~f~~~~p~~~---------------------------~~~~w~~- 156 (331)
T COG2334 112 GRPLER---DDNAE----QLEELGRMLGRLHLALRGFPFERPNAL---------------------------RRLEWDI- 156 (331)
T ss_pred CcCcCC---CCcHH----HHHHHHHHHHHHHHHhCcCCccCCCcc---------------------------cccchhh-
Confidence 999887 44444 4556777778888762 22211 2467875
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCc---eEeccccCCceeeecccc
Q 002526 756 IRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCS---WIHSDIMDDNVYMEPCCA 832 (912)
Q Consensus 756 ~~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~---~iH~d~m~~ni~~~~~~~ 832 (912)
+....+.+ + ....|+.+..++...+-. +..-++. ..|.. .||+|+.++||++.+..
T Consensus 157 ~~~~~~~~------~---~~~~~~~l~a~~~~~~~~-~~~~~~~----------~lp~~~~~iIH~D~~~~NVl~d~~~- 215 (331)
T COG2334 157 LEPRALLR------L---DLVEPEDLRAALLAALDR-LLARLPA----------HLPALGDQIIHGDLHPDNVLFDDDT- 215 (331)
T ss_pred hcchhhhh------h---cccCchhhHHHHHHHHHH-HHhhchh----------hCCcccceeeecCCCccceeEcCCC-
Confidence 22212111 1 113555455555554421 1111111 22333 89999999999996621
Q ss_pred ccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhhhcceee
Q 002526 833 SSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFLLNSICV 887 (912)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~~~~~~~ 887 (912)
. .+|+|||+|.--|-.+.=-.||+
T Consensus 216 ------------------------------~-~~g~iDFdDa~~~~~i~DlAi~l 239 (331)
T COG2334 216 ------------------------------D-VSGFIDFDDAGYGWFIYDLAIAL 239 (331)
T ss_pred ------------------------------C-eeeEEEccccccchHHHHHHHHH
Confidence 1 89999999998876554334444
No 32
>smart00256 FBOX A Receptor for Ubiquitination Targets.
Probab=98.14 E-value=3.3e-06 Score=64.80 Aligned_cols=40 Identities=35% Similarity=0.609 Sum_probs=38.8
Q ss_pred CCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHH
Q 002526 24 IPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMS 63 (912)
Q Consensus 24 LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~ 63 (912)
||+|++..|+++|++.|+.++++|||.|+.++.++.+|+.
T Consensus 1 lP~~ll~~I~~~l~~~d~~~~~~vc~~~~~~~~~~~~~~~ 40 (41)
T smart00256 1 LPDEILEEILSKLPPKDLLRLRKVSRRWRSLIDSHDFWFK 40 (41)
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcChhhhhc
Confidence 7999999999999999999999999999999999999985
No 33
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=98.13 E-value=1.7e-05 Score=87.38 Aligned_cols=193 Identities=20% Similarity=0.266 Sum_probs=103.1
Q ss_pred hHHHHHHHHhhcCCCCCccccccccCCC-CCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCccc
Q 002526 520 WLELLEEICNFHKLPTLTAEEKLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNY 594 (912)
Q Consensus 520 w~~~~~~i~~~~~l~~~~~~~~~p~~~G-snpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~ 594 (912)
|....+.|+...+.+.- -....||+.| -|-+|.+. .+.||+-.+.+.. - +..|.+.++.|.+. . ...
T Consensus 2 w~~i~~~~~~~~~~~~~-i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~-~---f~~Ea~gL~~L~~~-~--~~~ 73 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK-ITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRD-M---FEGEAEGLKALAEA-N--PIR 73 (288)
T ss_dssp HHHHHHHHHHHHTS------EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCC-H---HHHHHHHHHHHCHT-T--TSB
T ss_pred hHHHHHHHHHHhCCCCc-eeeeEecCCCChhheEEEECCCccEEEEecChhhHH-H---HHHHHHHHHHHHhc-C--CCC
Confidence 77788889998888731 1234466655 47787665 7889988843221 1 23588888888654 3 356
Q ss_pred ccceeeeeeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCce
Q 002526 595 IPDVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPY 674 (912)
Q Consensus 595 ~P~~la~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpY 674 (912)
+|++++.|... + =+|
T Consensus 74 vP~vi~~G~~~---------------------------------------------~--------------------~~f 88 (288)
T PF03881_consen 74 VPKVIAWGEYD---------------------------------------------D--------------------DAF 88 (288)
T ss_dssp S--EEEEEE-S---------------------------------------------S--------------------CCE
T ss_pred CCeEEEEEeec---------------------------------------------C--------------------Cce
Confidence 99999999854 1 139
Q ss_pred EEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcc-cCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHH
Q 002526 675 IITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHL-LPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWE 753 (912)
Q Consensus 675 iv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 753 (912)
+||++++... +. ..-++.||++|++||+ -|.+.+.-. ...++..+.-.-.--..|.
T Consensus 89 Llle~l~~~~-----~~------~~~~~~lg~~LA~LH~~~~~~~FGf~------------~~~~~G~~~q~N~w~~~W~ 145 (288)
T PF03881_consen 89 LLLEFLEMGS-----PS------PPDWEELGRQLAALHQWSPAGKFGFP------------VDTYIGSLPQPNTWTDSWE 145 (288)
T ss_dssp EEEE-------------------CCHHHHHHHHHHHHHH-T--SSBB-S------------S-EEETTEEE----BS-HH
T ss_pred EEEEeecCCC-----CC------chhHHHHHHHHHHHhhhcCCCCcCCC------------cCCcccCcCCCCCCCCCHH
Confidence 9999997751 11 1235789999999999 444443211 1112222222222347899
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCH----hHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 754 IFIRTLARKKKNLVNRLTAWGHPIPK----ALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 754 ~f~~~l~~~~~~~~~~~~~wg~~lp~----~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
.|-.. +|-.-..++....| .+. .+++++.++|+. ....||.|||||-..|+++..
T Consensus 146 ~Ff~~--~RL~~~l~~~~~~~--~~~~~~~~l~~~~~~~l~~-----------------~~~~PsLlHGDLW~GN~~~~~ 204 (288)
T PF03881_consen 146 EFFAE--QRLRPQLELAREKG--GLDAELERLVERLPSLLPG-----------------REPKPSLLHGDLWSGNVGFDA 204 (288)
T ss_dssp HHHHH--HCCHHHHHHHHHCT--SS-CHHHHHHHHHHHCCTT-----------------S----EEE-SS-SGGGEEEET
T ss_pred HHHHH--HHHHHHHHHHHhhC--CchhHHHHHHHHHHHHhcC-----------------CCCCceeeEcCccccceeecC
Confidence 99843 12245666676766 333 334444444421 245899999999999999966
No 34
>PRK06148 hypothetical protein; Provisional
Probab=98.10 E-value=2.5e-05 Score=99.08 Aligned_cols=49 Identities=24% Similarity=0.326 Sum_probs=35.7
Q ss_pred CCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhhhcceeeee
Q 002526 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFLLNSICVSY 889 (912)
Q Consensus 811 ~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~~~~~~~~~ 889 (912)
.|..+||+|+.++||++.+. .+ . +.++||||||+..|.++.=-.|+.+|
T Consensus 201 Lp~~vIHgDln~~NiLv~~~-----------------------~~------~-~isGiIDFgDa~~~~~v~DLAialay 249 (1013)
T PRK06148 201 LPAQVIHNDANDYNILVDAD-----------------------DG------E-RISGLIDFGDAVHAPRICEVAIAAAY 249 (1013)
T ss_pred CCcceECCCCCcccEEEcCC-----------------------CC------c-ceEEEEECcccccccHHHHHHHHHHH
Confidence 47789999999999999761 11 1 78999999999999544333333333
No 35
>PRK06149 hypothetical protein; Provisional
Probab=98.07 E-value=3.8e-05 Score=97.04 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=40.4
Q ss_pred HHHHH-hhcCCCCCccccccccCCCCCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccce
Q 002526 524 LEEIC-NFHKLPTLTAEEKLPVGNGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDV 598 (912)
Q Consensus 524 ~~~i~-~~~~l~~~~~~~~~p~~~GsnpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~ 598 (912)
+++++ +..|+.. +-.+++++.|=+|.|. .||+||+-..-.. ..+-.|..+..-|.+. ....++|++
T Consensus 22 ~~~ll~~~ygl~~----~~~~L~s~~d~nf~v~t~~~~yVLKi~~~~~~~---~~l~~e~~~l~hL~~~--~~glpvp~p 92 (972)
T PRK06149 22 AERILAEHYGLSG----TLTELGSQQDRNFRVDSDGGRFVLKICHAAYAA---VELEAQHAALRHLAER--EPALRVPVV 92 (972)
T ss_pred HHHHHHHhcCCce----EEEecCCcCcceEEEEecCCcEEEEeCCccCCh---HHHHHHHHHHHHHHhh--CCCCCCcee
Confidence 34444 4567653 3457799999999874 8999999853221 1233455544445433 123356676
Q ss_pred eee
Q 002526 599 LAS 601 (912)
Q Consensus 599 la~ 601 (912)
+.+
T Consensus 93 i~t 95 (972)
T PRK06149 93 IPA 95 (972)
T ss_pred eEC
Confidence 654
No 36
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.99 E-value=5.8e-05 Score=82.04 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=28.7
Q ss_pred EEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 675 IITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 675 iv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+||++++|..+... .+. ...++..+|++|+.||.++.+.
T Consensus 74 ~v~e~i~G~~l~~~--~~~---~~~~~~~ia~~L~~lH~~~~~~ 112 (302)
T cd05156 74 RIEEFIPSRTLTTE--ELR---DPDISAEIARRMAKLHSIVVPL 112 (302)
T ss_pred chhheeCCCcCCHh--HcC---CcHHHHHHHHHHHHhhCCCCCC
Confidence 57899999776542 222 1347889999999999998764
No 37
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ]. This relatively conserved structural motif is present in numerous proteins and serves as a link between a target protein and a ubiquitin-conjugating enzyme. The SCF complex (e.g., Skp1-Cullin-F-box) plays a similar role as an E3 ligase in the ubiquitin protein degradation pathway [, ]. Different F-box proteins as a part of SCF complex recruit particular substrates for ubiquitination through specific protein-protein interaction domains. Many mammalian F-box domains contain leucine-rich or WD-40 repeats (IPR001680 from INTERPRO). However, several F-box proteins either have other previously described domains such as Sec7 domain found in FBS protein or do not contain defined protein-protein interaction domains or motifs.; GO: 0005515 protein binding; PDB: 2E32_A 2E31_A 3V7D_B 1NEX_B 3MKS_D 3L2O_B.
Probab=97.96 E-value=4.5e-06 Score=66.92 Aligned_cols=45 Identities=36% Similarity=0.556 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHH
Q 002526 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLC 65 (912)
Q Consensus 21 l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~ 65 (912)
+..||+|++.+|+++|++.|+.++++|||.||.++.+..+|+..+
T Consensus 3 ~~~LP~~il~~Il~~l~~~~~~~l~~vsk~~~~~~~~~~~~~~~~ 47 (48)
T PF00646_consen 3 LSDLPDEILQEILSYLDPKDLLRLSLVSKRWRSLVDSPRLWKKII 47 (48)
T ss_dssp HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHCcHHHHHHHHHHhhHHHHHHcCCCccHHHh
Confidence 567999999999999999999999999999999999999999875
No 38
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.71 E-value=0.00069 Score=72.78 Aligned_cols=197 Identities=20% Similarity=0.300 Sum_probs=123.2
Q ss_pred hHHHHHHHHhhcCCCCCccccccccCCCCCceeeecccEEEEeecC--CccccccccchhHHHHHHHHhhCCCCcccccc
Q 002526 520 WLELLEEICNFHKLPTLTAEEKLPVGNGSNPVYLMADCVVKIFVEG--GFESSIYGLGTELEFYSLLAKVNSPLKNYIPD 597 (912)
Q Consensus 520 w~~~~~~i~~~~~l~~~~~~~~~p~~~GsnpV~~v~~~v~K~~~e~--g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~ 597 (912)
|...-+.|+...|.+...+-++++ |.--|--|.|.+-.-++|+.- +...+++ -.|..-+.+|.+++. +.+|+
T Consensus 2 w~~i~~qlse~~g~~~i~er~~v~-gG~inea~~v~dg~~~~FvK~n~~~~~~~f--~AEa~gL~~la~s~t---i~VP~ 75 (286)
T COG3001 2 WQAISQQLSEQLGEGEIKEREEVS-GGDINEAWRLRDGTDPFFVKCNQREQLSMF--TAEADGLELLARSNT---ITVPK 75 (286)
T ss_pred hHHHHHHHHHHhCchhhhcccccC-CccccceeEeecCCcceEEEecchhhHHHH--HHHHHHHHHHHhcCC---ccccc
Confidence 777788888888888554444445 444688888888788888833 3333433 378888888877763 47999
Q ss_pred eeeeeeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEE
Q 002526 598 VLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIIT 677 (912)
Q Consensus 598 ~la~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~ 677 (912)
+++.|... .=-|+||
T Consensus 76 vi~~G~~~-----------------------------------------------------------------~~sylVl 90 (286)
T COG3001 76 VIAVGASR-----------------------------------------------------------------DHSYLVL 90 (286)
T ss_pred eEEecCCC-----------------------------------------------------------------CeeEEEE
Confidence 99999954 2469999
Q ss_pred eecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHHHH
Q 002526 678 KRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIR 757 (912)
Q Consensus 678 ~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f~~ 757 (912)
++++=..+. .+=+..||+||++||+.--+.-- +....|. +.+..---.-...|..|-
T Consensus 91 e~L~~~~~d-----------~~~~~~~GqqLA~LH~~~~~~~f----------G~d~dn~-iG~t~QpN~W~~~Wa~Ff- 147 (286)
T COG3001 91 EYLPTGPLD-----------AHSAFILGQQLARLHQWGGQAQF----------GLDFDNY-IGTTPQPNTWQRRWATFF- 147 (286)
T ss_pred eeccCCCCC-----------chhHHHHHHHHHHHHhhcCcccc----------Ccccccc-cCCCCCCCCCcchHHHHH-
Confidence 999764432 23467899999999998644411 2222221 111111112346899998
Q ss_pred HHHHHHHHHHHHH-hhcCCCCC--HhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 758 TLARKKKNLVNRL-TAWGHPIP--KALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 758 ~l~~~~~~~~~~~-~~wg~~lp--~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
.+||-.--.++ ++-|...+ .++.++|.+-|.+ ..+.|+.||+||-..|.....
T Consensus 148 --aeqRig~qlqlar~rg~~f~did~~~~~v~elL~~-----------------hqpqPsLlHGDLW~gN~a~~~ 203 (286)
T COG3001 148 --AEQRIGWQLQLARERGLTFGDIDAIVEKIQELLAD-----------------HQPQPSLLHGDLWSGNCAFGK 203 (286)
T ss_pred --HHhhhhHHHHHHHHhCCCccCHHHHHHHHHHHHhc-----------------CCCCcceeecccccccccccC
Confidence 44554432222 22232222 4444444444322 356799999999999987754
No 39
>PLN02236 choline kinase
Probab=97.66 E-value=0.00091 Score=75.26 Aligned_cols=40 Identities=18% Similarity=0.240 Sum_probs=32.7
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
..+.+++|+|+.+.||++.+. -....||||+-+..||+..
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~--------------------------------~~~~~lID~Eya~~~~~~~ 236 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEE--------------------------------TRAITIIDYEYASYNPVAY 236 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCC--------------------------------CCcEEEEeehhccccchHH
Confidence 357899999999999999540 1357899999999999853
No 40
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=97.50 E-value=0.00068 Score=74.57 Aligned_cols=149 Identities=11% Similarity=0.001 Sum_probs=79.6
Q ss_pred ceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccH
Q 002526 673 PYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEW 752 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 752 (912)
||++|.+++|.. .. +...-+..+|+.|+.+|+......... ...+..-.+ +....|
T Consensus 81 ~~~L~~wi~G~~------~~---~~~~~~~~~~~~LA~lH~~~~~~~~~~---------~~~~~~~~~------~~~~~~ 136 (309)
T TIGR02904 81 LYYLMPWLDIER------NE---ERNYQHESMFQELALLHRKTVKTERVT---------EEELKKHYE------RTLSRW 136 (309)
T ss_pred EEEEeCCccccc------cc---CCHHHHHHHHHHHHHHHHhhhCCCccc---------HhHHHhHHH------HHHHHH
Confidence 599999999921 11 122457889999999999976321110 000000000 012345
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhc--ccCCCCCCCCCceEeccccCCceeeecc
Q 002526 753 EIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQD--ENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (912)
Q Consensus 753 ~~f~~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~--~~~~~~~~~~~~~iH~d~m~~ni~~~~~ 830 (912)
..-...++++++.+-. .+. -++.-.-+++.++.+.+. +..++..+.+ +.--.....+.+++|+|+-.+||++.+
T Consensus 137 ~~~~~~l~~~~~~~~~-~~~-~~~fe~~~~~~~~~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~lcHgD~~~~Nvl~~~- 212 (309)
T TIGR02904 137 ENIPEGLEEFIVEAEA-KWY-MSPFELQACTYYHEVMQA-AEFAQNKLEDWHEATKEKESWRTVLVHGKLSLSHFLYDE- 212 (309)
T ss_pred HHHHHHHHHHHHHHHH-Hhc-CCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcceeeeCCCCcHHhEEEcC-
Confidence 4443333433332221 111 124444555555555542 3334332211 000000124779999999999999955
Q ss_pred ccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 831 CASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
+ ..++||||..+.+|.+..
T Consensus 213 ------------------------~--------~~~~iIDfd~~~~d~~~~ 231 (309)
T TIGR02904 213 ------------------------T--------RGGYFINFEKASFASPLT 231 (309)
T ss_pred ------------------------C--------CCEEEEEhhhcccCCcHH
Confidence 1 137999999999998753
No 41
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.44 E-value=0.0029 Score=68.72 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=27.2
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLP 715 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp 715 (912)
-.|+++++++|..+. .-+. ..+..+|+.|+.||...
T Consensus 69 ~~~~l~~~i~G~~~~----~~~~----~~~~~~g~~La~lH~~~ 104 (313)
T TIGR02906 69 DLYVLTEWIEGRECD----FNNP----IDLKKAAKGLALFHHAS 104 (313)
T ss_pred EEEEEehhccCcCCC----CCCH----HHHHHHHHHHHHHHHhC
Confidence 368999999998775 1122 23778899999999875
No 42
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=97.37 E-value=0.0014 Score=70.16 Aligned_cols=125 Identities=23% Similarity=0.361 Sum_probs=86.0
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCcc
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAE 751 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (912)
|-|++|++++|.++++.+-.+.. +.+..-|+++||.||.+|.-. =|-+
T Consensus 88 ~~wLl~salpG~~~s~~~~~~~p---~r~v~~la~aLR~LH~l~~~a-----------------------------CPFd 135 (266)
T COG3231 88 QAWLLMSALPGEDASHPRYALDP---KRAVPLLAEALRRLHELPVEA-----------------------------CPFD 135 (266)
T ss_pred hhHHhhhhcCCCcccchhhcCCH---HHHHHHHHHHHHHHhcCChhh-----------------------------CCcc
Confidence 89999999999999998875654 456777999999999987321 2333
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--------cCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCC
Q 002526 752 WEIFIRTLARKKKNLVNRLTA--------WGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDD 823 (912)
Q Consensus 752 W~~f~~~l~~~~~~~~~~~~~--------wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ 823 (912)
|.-- +.|++-|+.+...+-+ .| -=+..+.+.|+.-.|. ...=|+.|||----
T Consensus 136 ~rl~-~rl~~a~~r~~a~~vdesdfd~e~qg-r~~~El~d~L~~~rp~------------------~edLVv~HGDACLP 195 (266)
T COG3231 136 RRLA-RRLAKARARVRAGLVDESDFDEERQG-RTAEELFDELEARRPA------------------VEDLVVTHGDACLP 195 (266)
T ss_pred hHHH-HHHHHHHHHHhccCCChhhcChhhcC-CCHHHHHHHHHhcCCc------------------hhhceeecCcccCc
Confidence 3322 2333333333222211 22 2345555555555542 13457899999999
Q ss_pred ceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 824 NVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 824 ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
||++.+ |+.+|.||+|.+.+||++.
T Consensus 196 N~i~d~---------------------------------~rf~GfIDlGrlGVaDRh~ 220 (266)
T COG3231 196 NFILDG---------------------------------WRFSGFIDLGRLGVADRHQ 220 (266)
T ss_pred ceEecC---------------------------------CceEEeeecCcccchHHHH
Confidence 999977 8999999999999999974
No 43
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.35 E-value=0.0016 Score=75.19 Aligned_cols=113 Identities=22% Similarity=0.209 Sum_probs=71.3
Q ss_pred hhcCCCCCcccccc-ccCCC-CCceeeec------ccEEEEeecC----Cc--cccccccchhHHHHHHHHhhCCCCccc
Q 002526 529 NFHKLPTLTAEEKL-PVGNG-SNPVYLMA------DCVVKIFVEG----GF--ESSIYGLGTELEFYSLLAKVNSPLKNY 594 (912)
Q Consensus 529 ~~~~l~~~~~~~~~-p~~~G-snpV~~v~------~~v~K~~~e~----g~--~~s~~~~~~E~~~y~~L~~~~~~L~~~ 594 (912)
..+|+-.+.++... ++|.| .|-||.|. ..|||.=++. |. ..+..-.-.|.+.+..+.+ ..+.+
T Consensus 18 ~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~---~~p~~ 94 (401)
T PRK09550 18 LKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAK---YVPDL 94 (401)
T ss_pred HhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHh---hCCCC
Confidence 44566555444333 77766 57889873 3799985422 11 0111112356666666543 34457
Q ss_pred ccceeeeeeeeeeCCceeeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCce
Q 002526 595 IPDVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPY 674 (912)
Q Consensus 595 ~P~~la~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpY 674 (912)
+|+|++.+. + -.+
T Consensus 95 VPkV~~~D~-----------------------------------------------~--------------------~~~ 107 (401)
T PRK09550 95 VPKVYHYDE-----------------------------------------------E--------------------LAV 107 (401)
T ss_pred CCeEEEECC-----------------------------------------------C--------------------CCE
Confidence 999998865 1 258
Q ss_pred EEEeecCCCchhHHhhcCC-HHHHHHHHHHHHHHHHhhcc
Q 002526 675 IITKRCKGKMFAQLRDALS-GEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 675 iv~~r~~G~~~~~~~~~l~-~~d~~~la~~lg~~~~~lH~ 713 (912)
+||+++++ ...+|..|. .+....+|..+|+.|+.+|.
T Consensus 108 lVME~L~~--~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f 145 (401)
T PRK09550 108 TVMEDLSD--HKILRKGLIDGKKYPKLAEHIGEFLARTLF 145 (401)
T ss_pred EEEecCCC--ccHHHHHHhcCCccHHHHHHHHHHHHHHHh
Confidence 99999998 333555544 44567899999999999994
No 44
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.15 E-value=0.0047 Score=71.50 Aligned_cols=103 Identities=17% Similarity=0.076 Sum_probs=68.9
Q ss_pred ccccCCC-CCceeeec----ccEEEEeecCCccccc---cccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCcee
Q 002526 541 KLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSI---YGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYT 612 (912)
Q Consensus 541 ~~p~~~G-snpV~~v~----~~v~K~~~e~g~~~s~---~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~ 612 (912)
.-++|.| +|+||.|. .+|||-=+++-.-.+. +.+..|..-+..|...+.-.+.++|+|++.+. .
T Consensus 37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de-d------- 108 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR-T------- 108 (418)
T ss_pred EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC-C-------
Confidence 3367766 69999995 5899988866332222 33445554556666565555679999999887 1
Q ss_pred eccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhhcC
Q 002526 613 IVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDAL 692 (912)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~~l 692 (912)
.-+++|++++|. ..-+|+.|
T Consensus 109 -----------------------------------------------------------~~vlvME~L~~~-~~ilr~~L 128 (418)
T PLN02756 109 -----------------------------------------------------------MALIGMRYLEPP-HIILRKGL 128 (418)
T ss_pred -----------------------------------------------------------CCEEEEeecCCc-ceehhhhh
Confidence 357899999883 12245544
Q ss_pred CHH-HHHHHHHHHHHHHHhh
Q 002526 693 SGE-DVLNLASFLGEQLRNL 711 (912)
Q Consensus 693 ~~~-d~~~la~~lg~~~~~l 711 (912)
... +...+|..+|+.|+..
T Consensus 129 l~G~~~p~~a~~ig~~la~t 148 (418)
T PLN02756 129 IAGIEYPLLAEHMSDYMAKT 148 (418)
T ss_pred ccCCCCHHHHHHHHHHHHHH
Confidence 433 4477888888888877
No 45
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.00 E-value=0.0083 Score=67.14 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=32.8
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
..+.|+.|.|+.+.||++.+. + .-.++|||+=+..+|+..
T Consensus 179 ~~~~v~CHnDl~~~NiL~~~~-----------------------~---------~~l~lID~EYag~nd~~f 218 (330)
T PLN02421 179 KAPVVFAHNDLLSGNLMLNED-----------------------E---------GKLYFIDFEYGSYSYRGY 218 (330)
T ss_pred CCCeEEEECCCCcccEEEeCC-----------------------C---------CcEEEEcccccCCCccHH
Confidence 357899999999999999651 1 136899999999999975
No 46
>PRK14879 serine/threonine protein kinase; Provisional
Probab=96.96 E-value=0.0069 Score=61.87 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=35.4
Q ss_pred ceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcc
Q 002526 673 PYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
.|+||++++|..+.++...... ....++..+++.|+.+|.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~ 113 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHS 113 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHh
Confidence 5899999999999999887666 888999999999999994
No 47
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=96.89 E-value=0.0026 Score=73.66 Aligned_cols=150 Identities=21% Similarity=0.317 Sum_probs=89.5
Q ss_pred ceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccH
Q 002526 673 PYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEW 752 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 752 (912)
+||+|.++.+.-.-+.-+.+|.+|...+++.| +.||.+.+--..+..+ +-.+.++
T Consensus 150 G~IimE~ven~~~~~~~e~~~~eql~~iv~aL----A~~~A~sl~ls~ee~~---------------------~~~~~~~ 204 (414)
T PF07914_consen 150 GFIIMEYVENVHSMDMYENLSVEQLLQIVRAL----AKFHALSLKLSEEEKK---------------------SISGPDF 204 (414)
T ss_pred CEEEEeccCCceeecccCCCCHHHHHHHHHHH----HHHHHhHccCCHHHhh---------------------hccCchH
Confidence 69999999997777888899999999887665 5567664422111100 0012333
Q ss_pred -HHHHHHHHH--HHHHHHHHHhhc-CCCCCH---hHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCce
Q 002526 753 -EIFIRTLAR--KKKNLVNRLTAW-GHPIPK---ALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNV 825 (912)
Q Consensus 753 -~~f~~~l~~--~~~~~~~~~~~w-g~~lp~---~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni 825 (912)
+.++..+-. ..+++.+.+++- |.--|+ .++++++.|+++ ....+.+..-+ .-...+||+.|||+-..||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~~~~~--~~~~~~~~~i~--~~lG~~~VL~HGDLw~~Ni 280 (414)
T PF07914_consen 205 LEEMFGEFFSEEGMKKIFENLRKIFGFFSPEKLEELIEKFEHYLPD--IKNFEKASNIN--KQLGIKPVLVHGDLWSSNI 280 (414)
T ss_pred HHHHHHHHhchHHHHHHHHHHHhhccccChHHHHHHHHHHHHhccc--HHhHHHHhhhH--HhcCCCcceecCCccHHhe
Confidence 333333211 133333333333 211244 347778888864 22222221100 0123399999999999999
Q ss_pred eeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcch
Q 002526 826 YMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKC 879 (912)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~ 879 (912)
+... .++ ++....-||||--+.+|-+
T Consensus 281 Lw~k-----------------------~~~-----g~~~l~AIIDwQ~vh~G~~ 306 (414)
T PF07914_consen 281 LWDK-----------------------DSD-----GKLKLKAIIDWQCVHRGSP 306 (414)
T ss_pred eeec-----------------------CCc-----hhHHHHHHHHHHHhhcCch
Confidence 9977 222 2468899999999999954
No 48
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=96.88 E-value=0.0035 Score=66.07 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=56.7
Q ss_pred CCCCCCccccCCCCCcc--cEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEE
Q 002526 258 PQRSGASWHVDPALTSA--WNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIEC 335 (912)
Q Consensus 258 p~GSgTplH~Dp~~Tsa--wnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~ 335 (912)
..|+...+|++|+. +- |+..|.|+=+.+|+.|.- ++.++
T Consensus 88 t~G~~~~~H~Hp~a-de~E~y~vi~G~g~m~v~~~~G--------------------------------------~~~v~ 128 (209)
T COG2140 88 TPGAMRELHYHPNA-DEPEIYYVLKGEGRMLVQKPEG--------------------------------------EARVI 128 (209)
T ss_pred cCCcccccccCCCC-CcccEEEEEeccEEEEEEcCCC--------------------------------------cEEEE
Confidence 45777888999985 56 999999998888887641 23667
Q ss_pred EEcCCCEEEeCCCCceeeEeCCCcEEEeecccCC
Q 002526 336 TQLPGETIVVPSGWWHCILNLETTIAVTQNFVDS 369 (912)
Q Consensus 336 vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~ 369 (912)
.++|||++|||++|-|.++|.++.=-+-.|.+..
T Consensus 129 ~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~v~~~ 162 (209)
T COG2140 129 AVRAGDVIYVPPGYGHYTINTGDEPLVFLNVYPA 162 (209)
T ss_pred EecCCcEEEeCCCcceEeecCCCCCEEEEEEEeC
Confidence 8999999999999999999998654444444433
No 49
>PTZ00296 choline kinase; Provisional
Probab=96.88 E-value=0.024 Score=66.33 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=34.2
Q ss_pred cc-CCCCCceeeec--------------ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCccccccee
Q 002526 543 PV-GNGSNPVYLMA--------------DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVL 599 (912)
Q Consensus 543 p~-~~GsnpV~~v~--------------~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~l 599 (912)
|+ |.=||-+|.|. .+|++||.++....- --.+|.+.+.+|.+.+ --|+|+
T Consensus 112 ~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI--dR~~E~~v~~~ls~~g-----i~P~l~ 176 (442)
T PTZ00296 112 QILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY--NPISEFEVYKTMSKYR-----IAPQLL 176 (442)
T ss_pred EecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee--CHHHHHHHHHHHHHCC-----CCCceE
Confidence 55 66799999885 488999987632211 1236998888887543 357777
No 50
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=96.76 E-value=0.004 Score=67.69 Aligned_cols=104 Identities=22% Similarity=0.273 Sum_probs=65.2
Q ss_pred EEEeec-CCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCCC-CccccccCCCCCCCCCcccccccCCCCCccH
Q 002526 675 IITKRC-KGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNE-SSLSDKLKTEPPFNNGFVEDVVDTSSVPAEW 752 (912)
Q Consensus 675 iv~~r~-~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 752 (912)
|+++|+ .|..++++-. +.+...-+.-+++.|+.||..+..+... .+ --.+|
T Consensus 71 lLLErl~~g~~L~~~~~---~g~d~~a~~i~a~l~~~L~~~~~~~~p~~l~------------------------~l~~~ 123 (253)
T PF04655_consen 71 LLLERLDPGRSLASLPR---EGDDDEATRIAAGLLRRLHRPAPEPLPSGLP------------------------PLADW 123 (253)
T ss_pred hhhhhccCCCchhhccc---ccCchHHHHHHHHHHHHHhCCCCCCCCccch------------------------hHHHH
Confidence 788999 6688887631 2133455667888999999886533321 10 12445
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 753 EIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 753 ~~f~~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
-..+....+ +.|+ ..++.|+++.-+.. ..|+.. ..+.+.||+|++.+||+-.+
T Consensus 124 ~~~l~~~~~---------~~~~-~~~~~l~~~a~~~~----~~Ll~~----------~~~~~lLHGDLH~~NIL~~~ 176 (253)
T PF04655_consen 124 FARLFARAR---------ERAG-APPRRLVDAAAALA----RELLAS----------PGEEVLLHGDLHHGNILAAG 176 (253)
T ss_pred HHHHHHHhH---------hhhc-cccHHHHHHHHHHH----HHHhcC----------CCcceeeccccchHhhhccC
Confidence 444433221 2344 36778877766644 456542 45779999999999999855
No 51
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.69 E-value=0.01 Score=65.78 Aligned_cols=100 Identities=27% Similarity=0.379 Sum_probs=68.4
Q ss_pred ccCCC-CCceeeec-------ccEEEEee-c-CCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCcee
Q 002526 543 PVGNG-SNPVYLMA-------DCVVKIFV-E-GGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYT 612 (912)
Q Consensus 543 p~~~G-snpV~~v~-------~~v~K~~~-e-~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~ 612 (912)
.+|.| -.-||.|. .+++|+-. + .+.... +-.|...+..|.. .+-..|+|.++..|. .
T Consensus 25 ~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~---l~~E~~vl~~l~~--~~~~~~~~~~~~~G~-~------- 91 (322)
T KOG1164|consen 25 KIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSV---LKIEIQVLKKLEK--KNGPSHFPKLLDHGR-S------- 91 (322)
T ss_pred eccccCCceEEEEEecCCCCeeEEEEEEEecccCCCcc---chhHHHHHHHHhh--hcCCCCCCEEEEecc-C-------
Confidence 44554 66788776 27888877 3 222223 5579988888865 344569999999996 1
Q ss_pred eccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCCCchhHHhh--
Q 002526 613 IVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRD-- 690 (912)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G~~~~~~~~-- 690 (912)
...+.||||+.+ |.++.+++.
T Consensus 92 --------------------------------------------------------~~~~~~iVM~l~-G~sL~dl~~~~ 114 (322)
T KOG1164|consen 92 --------------------------------------------------------TEDFNFIVMSLL-GPSLEDLRKRN 114 (322)
T ss_pred --------------------------------------------------------CCceeEEEEecc-CccHHHHHHhC
Confidence 123899999865 889999884
Q ss_pred ---cCCHHHHHHHHHHHHHHHHhhc
Q 002526 691 ---ALSGEDVLNLASFLGEQLRNLH 712 (912)
Q Consensus 691 ---~l~~~d~~~la~~lg~~~~~lH 712 (912)
.+|..-..+||.++...|..||
T Consensus 115 ~~~~fs~~T~l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 115 PPGRFSRKTVLRIAIQNLNALEDLH 139 (322)
T ss_pred CCCCcCHhHHHHHHHHHHHHHHHHH
Confidence 5556667777777766666555
No 52
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=96.67 E-value=0.0017 Score=71.62 Aligned_cols=47 Identities=28% Similarity=0.563 Sum_probs=43.5
Q ss_pred CCCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHH
Q 002526 20 DLKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCL 66 (912)
Q Consensus 20 ~l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l 66 (912)
.+..|||||++.|++.|...+|.+++.|||+||-+++++.+|..+=+
T Consensus 97 ~~~slpDEill~IFs~L~kk~LL~~~~VC~Rfyr~~~de~lW~~lDl 143 (419)
T KOG2120|consen 97 SWDSLPDEILLGIFSCLCKKELLKVSGVCKRFYRLASDESLWQTLDL 143 (419)
T ss_pred CcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhccccccceeeecc
Confidence 47899999999999999999999999999999999999999976543
No 53
>PRK10271 thiK thiamine kinase; Provisional
Probab=96.65 E-value=0.0033 Score=65.59 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.1
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
..+.+.+|+|++++||++.+ ++ -.||||+.+..||+.+
T Consensus 74 ~l~~~p~H~D~~~~N~~~~~-------------------------------~~---~~lIDwe~a~~gDp~~ 111 (188)
T PRK10271 74 PLRLAPLHMDVHAGNLVHSA-------------------------------SG---LRLIDWEYAGDGDIAL 111 (188)
T ss_pred CCCeeeecCCCCCccEEEEC-------------------------------CC---EEEEeCCcccCCCHHH
Confidence 45779999999999998855 12 2399999999999965
No 54
>PTZ00384 choline kinase; Provisional
Probab=96.42 E-value=0.12 Score=59.58 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=27.2
Q ss_pred eEEEeecCCCchhHHhhcCCHHHHH--HHHHHHHHHHHhhcccCCC
Q 002526 674 YIITKRCKGKMFAQLRDALSGEDVL--NLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 674 Yiv~~r~~G~~~~~~~~~l~~~d~~--~la~~lg~~~~~lH~lp~~ 717 (912)
++|+++++|..+ +.+|.. .+...+++.|+.||.++.+
T Consensus 125 g~l~efIeGr~l-------~~~dl~~p~~~~~IA~~La~lH~~~~~ 163 (383)
T PTZ00384 125 FTIQEWVEGNTM-------GIDSLQNLSVLTGIASSLAKFHKRVTE 163 (383)
T ss_pred EEEEEEeccccC-------ChhHhcCHHHHHHHHHHHHHHhccccc
Confidence 489999999543 434332 4678899999999998743
No 55
>smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily. Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press).
Probab=96.22 E-value=0.0041 Score=52.05 Aligned_cols=49 Identities=27% Similarity=0.430 Sum_probs=35.0
Q ss_pred CCCCccccchhcccCCC-CCCCcceEEecCCCCCCccccCCCCCcccEEEEEeE
Q 002526 230 RVPDLFQEDLFNVLDGD-MRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGR 282 (912)
Q Consensus 230 ~vP~~F~eDlf~~L~~~-~RPd~rwL~IGp~GSgTplH~Dp~~TsawnaqI~Gr 282 (912)
.+|. ..++++.++.. ..+..+|+++|+.+|.|++|+|++++ +|..+.|.
T Consensus 7 ~lP~--~~~ll~~~~~~~~~~~~~~~~~G~~~s~t~~H~d~~~~--~n~~~~~~ 56 (57)
T smart00558 7 KLPF--KLNLLSDLPEDILGPDVPYLYMGMAGSVTPWHIDDYDL--VNYLHQGA 56 (57)
T ss_pred hCCC--cchHHHHCCcccCCCCcceEEEeCCCCccceeEcCCCe--EEEEEecC
Confidence 4554 45666655433 34455999999999999999999986 66666553
No 56
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=96.22 E-value=0.048 Score=65.17 Aligned_cols=207 Identities=17% Similarity=0.211 Sum_probs=106.7
Q ss_pred CCCCCceeeec-ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeeccCCCCCccc
Q 002526 545 GNGSNPVYLMA-DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDGKGVLD 623 (912)
Q Consensus 545 ~~GsnpV~~v~-~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~~~~~~~~~~ 623 (912)
+.=||=..++| .+|||+|=..-. |.--|+|.-.-|.+.+ -.+||.++++=.... ..|.+-
T Consensus 175 ~EQSNtSi~~g~~~ilKlyRrl~~-----G~nPe~E~~r~Lte~g---f~~vP~llG~v~~~~-----------~~g~~~ 235 (528)
T TIGR02457 175 AEQSNSSLVVGDRVVLKLYRKVEP-----GINPEIEMGRYLTAAG---YANIPPLLGSVERVG-----------GDQAPH 235 (528)
T ss_pred CCcCceEEEECCEEEEEEecccCC-----CCCcchHHHHHHHhCC---CccCCcccEEEEEEc-----------CCCCEE
Confidence 66789999999 899999983311 1226888888888754 348999997644321 122111
Q ss_pred ccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEe---ec-------CCCchhHHhhcCC
Q 002526 624 VIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITK---RC-------KGKMFAQLRDALS 693 (912)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~---r~-------~G~~~~~~~~~l~ 693 (912)
.| |-=..+++. ..+.|.|.+.. ++ ++...+ +.-.
T Consensus 236 tl-------------------------a~lq~fV~n--------qgDaW~~tl~~l~r~~e~~~~~~~~~~~~---~~~~ 279 (528)
T TIGR02457 236 TL-------------------------GLLQGYVQN--------QGDAWRWTLGHLKRYIEEQLSPCANGALA---PTLI 279 (528)
T ss_pred ee-------------------------ehHhhhhCC--------CccHHHHHHHHHHHHHHhhhccccccccC---hhhh
Confidence 00 100011111 23346553211 00 000000 0001
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCccccccCCCCCCCCCcccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhc
Q 002526 694 GEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTAW 773 (912)
Q Consensus 694 ~~d~~~la~~lg~~~~~lH~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~f~~~l~~~~~~~~~~~~~w 773 (912)
-.+....|+.||+.++.+|..=--+... .+|--+ .--+.+=....+.++.+=..+...++..
T Consensus 280 ~~~~~~~a~~LG~rtAemH~aLA~~~~~--------------~aF~pe----p~~~~~~~~~~~~~~~~~~~a~~~L~~~ 341 (528)
T TIGR02457 280 GAGYLEFAGLLGRRLAELHLALAAGGED--------------PAFAPE----PISTLYQRSWYQDMRAQAERALQLLAQS 341 (528)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCC--------------CCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2357889999999999999741100000 000000 0001111233444455556777777665
Q ss_pred CCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCce---EeccccCCceeeec
Q 002526 774 GHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSW---IHSDIMDDNVYMEP 829 (912)
Q Consensus 774 g~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~---iH~d~m~~ni~~~~ 829 (912)
-+.+|+...+.++..+.. -..|...+.. -........ ||||++-.||++.+
T Consensus 342 ~~~l~~~~~~~~~~l~~~-~~~l~~~~~~----l~~~~~~~~k~RiHGD~HLgqvL~t~ 395 (528)
T TIGR02457 342 RDGLPAAARALADRLLAQ-RKELAAHLRP----LVKREIDGLKIRIHGDFHLGQVLVVQ 395 (528)
T ss_pred hccCChhHHHHHHHHHHH-HHHHHHHHHH----HhhcCCCcceEeEecCcchhcEEEeC
Confidence 557888766666555532 1223222211 000234556 99999999999965
No 57
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=96.19 E-value=0.04 Score=55.87 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=29.2
Q ss_pred ceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcc
Q 002526 673 PYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
.||||++|+|..+.++...-.. .++..+++.|+.||.
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~~~----~~~~~i~~~l~~lH~ 108 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEGND----ELLREIGRLVGKLHK 108 (199)
T ss_pred CEEEEEEECCccHHHHHhhcHH----HHHHHHHHHHHHHHH
Confidence 4899999999998887543221 788888999988885
No 58
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.74 E-value=0.009 Score=61.97 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=25.5
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
..+-|+-|.|+.+.||++.. .+ .-..+|||+=++.+++..
T Consensus 140 ~~~~v~cHnDl~~~Nil~~~-----------------------~~---------~~~~lIDfEya~~n~~~f 179 (211)
T PF01633_consen 140 NSPLVFCHNDLNPGNILINN-----------------------KD---------GEVKLIDFEYAGYNDRAF 179 (211)
T ss_dssp CGGEEEE-S--SGGGEEETS-----------------------SS---------SCEEE--GTT-EEEEHHH
T ss_pred CCCceEeeccCccccEEecc-----------------------CC---------CeEEEecHHHHhhccchh
Confidence 34689999999999999922 01 125699999999999875
No 59
>PF06881 Elongin_A: RNA polymerase II transcription factor SIII (Elongin) subunit A; InterPro: IPR010684 This family represents a conserved region within RNA polymerase II transcription factor SIII (Elongin) subunit A. In mammals, the Elongin complex activates elongation by RNA polymerase II by suppressing transient pausing of the polymerase at many sites within transcription units. Elongin is a heterotrimer composed of A, B, and C subunits of 110, 18, and 15 kilodaltons, respectively. Subunit A has been shown to function as the transcriptionally active component of Elongin [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus, 0016021 integral to membrane
Probab=94.66 E-value=0.028 Score=53.60 Aligned_cols=67 Identities=19% Similarity=0.329 Sum_probs=54.4
Q ss_pred CCCCCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHHhhcCC---C--ccccCccceeeccc
Q 002526 18 LGDLKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKASG---V--LQYKGSWKKTALHL 86 (912)
Q Consensus 18 LG~l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~~~---~--~~~~gSWR~Tyl~~ 86 (912)
+.++..+|-++|.-||..++|..|.++-..|..+... .++||+.+|.+.++. . .+-..|||..|...
T Consensus 1 i~dvG~~py~ll~piL~~~~~~QL~~iE~~np~l~~~--tdeLW~~~i~rdFp~~~~~~~~~~~~~Wr~~Y~~~ 72 (109)
T PF06881_consen 1 IEDVGDVPYHLLRPILEKCSPEQLRRIEDNNPHLIED--TDELWKKLIKRDFPEESKRQKPKEPESWRELYEKL 72 (109)
T ss_pred CCccCCCCHHHHHHHHccCCHHHHHHHHHhCCCcchh--hHHHHHHHHHhHCcChhhcccccccchHHHHHHHH
Confidence 3566779999999999999999999999999655544 789999999999963 1 12224999999974
No 60
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=94.65 E-value=0.26 Score=51.14 Aligned_cols=71 Identities=15% Similarity=0.135 Sum_probs=47.3
Q ss_pred CHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCc
Q 002526 778 PKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEF 857 (912)
Q Consensus 778 p~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (912)
++.+.+++..+.+. +......... .......+++|||+...||+.... .+
T Consensus 90 ~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~vl~HgD~~~~N~~~~~~-----------------------~~-- 139 (196)
T smart00587 90 VEEYIEKLDKLLDN-LEDLKKEDKE----PDEGEFNVLNHGDLWANNIMFKYD-----------------------DE-- 139 (196)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHhcC----CCCCCceEEeeCCCCccceeeccC-----------------------CC--
Confidence 78888998888764 3322211111 111247899999999999999651 11
Q ss_pred CcCcceeeeeeeecCCCCCcchhh
Q 002526 858 GEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 858 ~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
+.-....||||..+..|++..
T Consensus 140 ---~~~~~~~liDfq~~~~g~p~~ 160 (196)
T smart00587 140 ---GKPEDVALIDFQLSHYGSPAE 160 (196)
T ss_pred ---CCccceEEEecccCCcCChHH
Confidence 123456899999999999864
No 61
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=94.16 E-value=0.21 Score=54.27 Aligned_cols=43 Identities=19% Similarity=0.060 Sum_probs=32.9
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchh
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCF 880 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~ 880 (912)
....+++|||+..+||+.... ++| .-.-..+|||.=+..|-+.
T Consensus 212 ~~~~vl~HGD~w~nNilf~~~-----------------------~~g-----~~~~~~liDfQ~~~~g~p~ 254 (294)
T PF02958_consen 212 EPFNVLCHGDFWTNNILFKYD-----------------------DDG-----KPIDVVLIDFQLARYGSPA 254 (294)
T ss_pred CCceEEEcCccCHHhEeEccc-----------------------ccc-----ccccceeeccccccCCCcH
Confidence 568999999999999999661 111 1234679999999999774
No 62
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=93.64 E-value=0.15 Score=50.47 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=50.7
Q ss_pred CCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEE--E
Q 002526 259 QRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIEC--T 336 (912)
Q Consensus 259 ~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~--v 336 (912)
+|+....|+. . .+.+..+++|+=+..+..|+... +. .+...- .
T Consensus 43 pg~~~~Ph~h-~-a~~i~~V~~G~~~~~~v~~~~~~-----------~~----------------------~~~~~~~v~ 87 (144)
T PF00190_consen 43 PGGLRAPHYH-N-ADEIVYVIEGRGRVGVVGPGGPQ-----------EE----------------------FRDFSQKVR 87 (144)
T ss_dssp TTEEEEEEEE-S-SEEEEEEEESEEEEEEEETTCSS-----------SE----------------------EEEEEEEEE
T ss_pred cCCccceeEe-e-eeEEeeeeccceEEEEEecCCcc-----------cc----------------------ceeeeceee
Confidence 5677778888 4 35799999999887777665311 00 011222 5
Q ss_pred EcCCCEEEeCCCCceeeEeC--CCcEEEeecccC
Q 002526 337 QLPGETIVVPSGWWHCILNL--ETTIAVTQNFVD 368 (912)
Q Consensus 337 LePGDvLFVPsGWWHqV~NL--ddSIAVn~NFv~ 368 (912)
+++||+++||+||.|.+.|. ++.+.+..-+.+
T Consensus 88 l~~Gdv~~vP~G~~h~~~n~~~~~~~~~~~f~~~ 121 (144)
T PF00190_consen 88 LKAGDVFVVPAGHPHWIINDGDDEALVLIIFDTN 121 (144)
T ss_dssp EETTEEEEE-TT-EEEEEECSSSSEEEEEEEEES
T ss_pred eecccceeeccceeEEEEcCCCCCCEEEEEEECC
Confidence 99999999999999999999 466666554433
No 63
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=93.58 E-value=0.22 Score=48.37 Aligned_cols=48 Identities=23% Similarity=0.314 Sum_probs=41.8
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|++|+++.|..+.+..+ .++.+++.+++..+.+.+..||....-+.
T Consensus 65 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~ 116 (215)
T cd00180 65 HLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHR 116 (215)
T ss_pred eEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 7899999999988888875 47999999999999999999999865443
No 64
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=93.31 E-value=0.087 Score=59.17 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=46.6
Q ss_pred CCCCC----HHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHHhhcC
Q 002526 21 LKIIP----DEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKAS 70 (912)
Q Consensus 21 l~~LP----DElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~~ 70 (912)
+..|| |++...||+|||..+|.+.-.||+.++....+.-+||+++.+..-
T Consensus 75 i~~lP~~gl~hi~e~ilsyld~~sLc~celv~k~W~r~l~dg~~WKkLie~~vr 128 (499)
T KOG0281|consen 75 ITALPEQGLDHIAENILSYLDALSLCACELVCKEWKRVLSDGMLWKKLIERMVR 128 (499)
T ss_pred HHhcccccHHHHHHHHHHhcchhhhhHHHHHHHHHHHHhccchHHHHHHHHhcc
Confidence 35799 999999999999999999999999999999999999999999653
No 65
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.20 E-value=0.17 Score=58.02 Aligned_cols=43 Identities=23% Similarity=0.374 Sum_probs=34.5
Q ss_pred ceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCc--chhhhcceeee
Q 002526 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIG--KCFLLNSICVS 888 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~G--d~~~~~~~~~~ 888 (912)
-++|+||++|||+.... . .-..|+|||.+.+. +..++...|.|
T Consensus 140 gi~HRDLK~ENilld~~-------------------------------~-~~~Kl~DFG~s~~~~~~~~~l~t~cGs 184 (370)
T KOG0583|consen 140 GIVHRDLKPENILLDGN-------------------------------E-GNLKLSDFGLSAISPGEDGLLKTFCGS 184 (370)
T ss_pred CEeeCCCCHHHEEecCC-------------------------------C-CCEEEeccccccccCCCCCcccCCCCC
Confidence 46899999999999651 1 23579999999988 57899998876
No 66
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=93.12 E-value=0.31 Score=55.92 Aligned_cols=61 Identities=18% Similarity=0.321 Sum_probs=47.5
Q ss_pred CCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEc
Q 002526 259 QRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQL 338 (912)
Q Consensus 259 ~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLe 338 (912)
+|..+++|.+++. +-|..++.|+=+..++.++. ...+..++
T Consensus 254 PG~~~~~H~H~~~-~E~~yvl~G~~~~~v~d~~g--------------------------------------~~~~~~l~ 294 (367)
T TIGR03404 254 PGAMRELHWHPNA-DEWQYFIQGQARMTVFAAGG--------------------------------------NARTFDYQ 294 (367)
T ss_pred CCCccCCeeCcCC-CeEEEEEEEEEEEEEEecCC--------------------------------------cEEEEEEC
Confidence 5677889998875 35899999987777665431 12345699
Q ss_pred CCCEEEeCCCCceeeEeCCC
Q 002526 339 PGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 339 PGDvLFVPsGWWHqV~NLdd 358 (912)
|||++|||.|..|.++|.++
T Consensus 295 ~GD~~~iP~g~~H~i~N~G~ 314 (367)
T TIGR03404 295 AGDVGYVPRNMGHYVENTGD 314 (367)
T ss_pred CCCEEEECCCCeEEEEECCC
Confidence 99999999999999999974
No 67
>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=93.01 E-value=0.03 Score=62.45 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=67.1
Q ss_pred ecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCC----cceeeecCCCCCccCCCCcchhhhhhcCCCCCC-CC
Q 002526 256 IGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPL----GVTVHVNEDDGDVNIETPSSLEWWLDFYPLLAD-DD 330 (912)
Q Consensus 256 IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~----gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~-a~ 330 (912)
++-....+..|.|-.. +..+++.|-||-++++|.+.-. .++... ..-..|+..|| +-+||.+.. ..
T Consensus 180 vpvEvg~~y~~~~w~q--~l~t~~~g~~R~~~~~p~~~~YlAqh~lfdqi--~elk~Di~iPD-----yc~~~~f~~~~v 250 (355)
T KOG2132|consen 180 VPVEVGSTYADEDWSQ--NLMTQIKGIKRCILFEPRECLYLAQHHLFDQI--PELKFDISIPD-----YCSFPNFENEVV 250 (355)
T ss_pred eeeecccccchhHHHh--hhHHHhhhhhhhhcCCccccchhhhhhhhccc--hhhhhccCCCc-----eeecCCCCcccc
Confidence 4445567888998865 4899999999999999993221 111111 11233677788 677888766 22
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEeCCCcE
Q 002526 331 KPIECTQLPGETIVVPSGWWHCILNLETTI 360 (912)
Q Consensus 331 ~~~E~vLePGDvLFVPsGWWHqV~NLddSI 360 (912)
....++..+|+++++|..|||.+....-+.
T Consensus 251 ~~~~w~GpaGtV~pih~dp~hNi~~qv~G~ 280 (355)
T KOG2132|consen 251 DINAWIGPAGTVLPIHMDPWHNILSQVFGR 280 (355)
T ss_pred ceeEEeccCCceeccccccccceeeeeecc
Confidence 455666667999999999999998876433
No 68
>PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5.3.1.9 from EC), which are involved in glycolysis and in gluconeogenesis and catalyse the conversion of D-glucose 6-phosphate to D-fructose 6-phosphate. The deduced amino acid sequence of the first archaeal PGI isolated from Pyrococcus furiosus revealed that it is not related to its eukaryotic and many of its bacterial counterparts. In contrast, this archaeal PGI shares similarity with the cupin superfamily that consists of a variety of proteins that are generally involved in sugar metabolism in both prokaryotes and eukaryotes [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0006094 gluconeogenesis, 0006096 glycolysis, 0005737 cytoplasm; PDB: 1J3Q_B 1J3R_B 1J3P_A 2GC0_A 1X8E_A 1X82_A 1QY4_B 2GC2_B 1QXJ_A 1QXR_B ....
Probab=92.87 E-value=0.21 Score=52.17 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=28.5
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecccCC
Q 002526 331 KPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDS 369 (912)
Q Consensus 331 ~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~ 369 (912)
..+-+..+|||+++||++|-|.+.|.++..-+..|+++.
T Consensus 108 ~~~~v~~~~G~~v~IPp~yaH~tIN~g~~~L~~~~~~~~ 146 (182)
T PF06560_consen 108 DVIAVEAKPGDVVYIPPGYAHRTINTGDEPLVFAAWVPR 146 (182)
T ss_dssp -EEEEEE-TTEEEEE-TT-EEEEEE-SSS-EEEEEEEET
T ss_pred eEEEEEeCCCCEEEECCCceEEEEECCCCcEEEEEEEec
Confidence 356688999999999999999999999877777777764
No 69
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=92.85 E-value=0.16 Score=60.41 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=28.6
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
-.|+||++|+|..+.+... +...++.++++.|..||.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----~~~~~~~~i~~~L~~lH~ 446 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----GNPELVRKVGEIVAKLHK 446 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----HHHHHHHHHHHHHHHHHh
Confidence 3689999999999988764 456677777777777773
No 70
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=92.52 E-value=0.56 Score=49.34 Aligned_cols=36 Identities=22% Similarity=0.203 Sum_probs=27.8
Q ss_pred CEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeeccc
Q 002526 332 PIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFV 367 (912)
Q Consensus 332 ~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv 367 (912)
..+..++|||++|||+||-|.+.|.++.-.+-.+.+
T Consensus 119 ~~~~~v~pGd~v~IPpg~~H~~iN~G~epl~fl~v~ 154 (191)
T PRK04190 119 ARWIEMEPGTVVYVPPYWAHRSVNTGDEPLVFLACY 154 (191)
T ss_pred EEEEEECCCCEEEECCCCcEEeEECCCCCEEEEEEE
Confidence 456789999999999999999999875444433333
No 71
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=91.94 E-value=0.65 Score=48.50 Aligned_cols=43 Identities=23% Similarity=0.272 Sum_probs=38.0
Q ss_pred eEEEeecCC-CchhHHhhc---CCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 674 YIITKRCKG-KMFAQLRDA---LSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 674 Yiv~~r~~G-~~~~~~~~~---l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
|+||++++| ..+.++... ++.+....++..+|+.++.||..-.
T Consensus 93 ~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi 139 (206)
T PF06293_consen 93 YLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDAGI 139 (206)
T ss_pred EEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHCcC
Confidence 899999999 578888775 7888999999999999999998743
No 72
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=91.24 E-value=0.93 Score=46.47 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=57.8
Q ss_pred CcceEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCC
Q 002526 250 SYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADD 329 (912)
Q Consensus 250 d~rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a 329 (912)
.+..+.+|.++..+.+|.+.. .-|+.|+.|.=...+...
T Consensus 28 ~~~v~~vgGpn~R~d~H~~~t--dE~FyqleG~~~l~v~d~--------------------------------------- 66 (159)
T TIGR03037 28 EFMVTVVGGPNARTDFHDDPG--EEFFYQLKGEMYLKVTEE--------------------------------------- 66 (159)
T ss_pred cEEEEEeCCCCCCcccccCCC--ceEEEEEcceEEEEEEcC---------------------------------------
Confidence 345677888889999999774 459999998633322111
Q ss_pred CCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeeccc
Q 002526 330 DKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFV 367 (912)
Q Consensus 330 ~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv 367 (912)
.+...+.+++||+++||+|=-|.....++|+.+-..-.
T Consensus 67 g~~~~v~L~eGd~flvP~gvpHsP~r~~~t~~LvIE~~ 104 (159)
T TIGR03037 67 GKREDVPIREGDIFLLPPHVPHSPQRPAGSIGLVIERK 104 (159)
T ss_pred CcEEEEEECCCCEEEeCCCCCcccccCCCcEEEEEEeC
Confidence 12345889999999999999999999999999876433
No 73
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=90.43 E-value=1.6 Score=48.11 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=35.6
Q ss_pred ceEEEeecCCC-chhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 673 PYIITKRCKGK-MFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 673 pYiv~~r~~G~-~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-||||++++|. .+.++-. ..+.+.+..|...+|+.++.||..-+
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi 159 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGI 159 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 58999999995 7877742 34456788999999999999999743
No 74
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=90.14 E-value=0.17 Score=55.16 Aligned_cols=17 Identities=41% Similarity=0.559 Sum_probs=15.0
Q ss_pred CCceEeccccCCceeee
Q 002526 812 PCSWIHSDIMDDNVYME 828 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~ 828 (912)
--++||+||+|||+||-
T Consensus 129 ~r~fiHRDIKPdNFLMG 145 (341)
T KOG1163|consen 129 LRNFIHRDIKPDNFLMG 145 (341)
T ss_pred hhccccccCCccceeec
Confidence 35799999999999993
No 75
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=90.12 E-value=1.2 Score=46.38 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=57.0
Q ss_pred CcceEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCC
Q 002526 250 SYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADD 329 (912)
Q Consensus 250 d~rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a 329 (912)
++..+++|.++..+.+|+++.. -|..|+.|.=+..+...
T Consensus 34 d~~VmvvgGpn~r~d~H~~~td--E~FyqleG~~~l~v~d~--------------------------------------- 72 (177)
T PRK13264 34 DFIVMVVGGPNARTDFHYDPGE--EFFYQLEGDMYLKVQED--------------------------------------- 72 (177)
T ss_pred CEEEEEEccCCcccccccCCCc--eEEEEECCeEEEEEEcC---------------------------------------
Confidence 4556778888989999998864 48899988633332211
Q ss_pred CCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeec
Q 002526 330 DKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQN 365 (912)
Q Consensus 330 ~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~N 365 (912)
.+...+.+.+||+++||+|=-|.....++||.+-..
T Consensus 73 g~~~~v~L~eGd~fllP~gvpHsP~r~~~tv~LviE 108 (177)
T PRK13264 73 GKRRDVPIREGEMFLLPPHVPHSPQREAGSIGLVIE 108 (177)
T ss_pred CceeeEEECCCCEEEeCCCCCcCCccCCCeEEEEEE
Confidence 123458899999999999999999998899988763
No 76
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.83 E-value=0.86 Score=54.55 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=32.3
Q ss_pred CCCCceeeec-----ccEEEEee-cCCccccccccchhHHHHHHHHhhCCC
Q 002526 546 NGSNPVYLMA-----DCVVKIFV-EGGFESSIYGLGTELEFYSLLAKVNSP 590 (912)
Q Consensus 546 ~GsnpV~~v~-----~~v~K~~~-e~g~~~s~~~~~~E~~~y~~L~~~~~~ 590 (912)
.||+-||.|= .|.+|-.+ .++..++++|+-.|+ .+|.|+.+.
T Consensus 372 GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI---~lL~KLkg~ 419 (677)
T KOG0596|consen 372 GGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEI---ALLNKLKGH 419 (677)
T ss_pred CCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHH---HHHHHhcCC
Confidence 7899999773 46666666 779999999999999 555555454
No 77
>KOG3926 consensus F-box proteins [Amino acid transport and metabolism]
Probab=89.70 E-value=0.35 Score=53.04 Aligned_cols=67 Identities=27% Similarity=0.427 Sum_probs=55.2
Q ss_pred CCCCCCHHHHHHHHhcC-CHHHHHHHHHHhHHHHHHccChhhHHHHHHhhcCCC-------ccc--cCccceeeccc
Q 002526 20 DLKIIPDEIICSILEHL-TPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKASGV-------LQY--KGSWKKTALHL 86 (912)
Q Consensus 20 ~l~~LPDElLl~ILs~L-d~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~~~~-------~~~--~gSWR~Tyl~~ 86 (912)
.|..||-|+++.||-.| |-+||..+|++--.|+.+..++.|||.+|.=.+... +.- +--||.+|...
T Consensus 201 tl~dLP~e~vl~Il~rlsDh~dL~s~aqa~etl~~l~~e~~iWkkLcqfHF~erQi~~~l~l~k~~q~dWkqmyf~L 277 (332)
T KOG3926|consen 201 TLHDLPLECVLNILLRLSDHRDLESLAQAWETLAKLSEERRIWKKLCQFHFNERQIHTILILSKKGQKDWKQMYFQL 277 (332)
T ss_pred CcccchHHHHHHHHHHccCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhccccchhHHHHHHHH
Confidence 67889999999999888 589999999999999999999999999998766421 111 12599999873
No 78
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=88.13 E-value=2.3 Score=44.16 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=39.9
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+++|..+.+... .+++.....++.++.+.|..||....-+
T Consensus 67 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 117 (252)
T cd05084 67 PIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIH 117 (252)
T ss_pred CeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4799999999988887643 4889999999999999999999876544
No 79
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=87.78 E-value=2.1 Score=45.99 Aligned_cols=40 Identities=23% Similarity=0.284 Sum_probs=29.5
Q ss_pred CceEEEeecCC-CchhHHhhc--CCHHHHHHHHHHHHHHHHhhcccC
Q 002526 672 WPYIITKRCKG-KMFAQLRDA--LSGEDVLNLASFLGEQLRNLHLLP 715 (912)
Q Consensus 672 WpYiv~~r~~G-~~~~~~~~~--l~~~d~~~la~~lg~~~~~lH~lp 715 (912)
-+||||++++| ..+.++... ++++ +..++++.++.||..-
T Consensus 120 ~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH~~G 162 (239)
T PRK01723 120 RADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFHDAG 162 (239)
T ss_pred eeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHHHCC
Confidence 36899999998 677776543 3443 3567889999999874
No 80
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=87.45 E-value=2.3 Score=45.46 Aligned_cols=50 Identities=14% Similarity=0.068 Sum_probs=42.0
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
.+|+||++|+|..+.+... .|+......++.++.+.|+.||.....+.+.
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl 131 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDI 131 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 6899999999988877643 4788899999999999999999887666544
No 81
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=87.28 E-value=2.6 Score=45.24 Aligned_cols=48 Identities=17% Similarity=0.104 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh---------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|+|..+++... .+++.....++.++.+.|+.||...+.+.
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~ 153 (295)
T cd05097 91 PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHR 153 (295)
T ss_pred ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 5799999999988877643 36788899999999999999998865443
No 82
>PRK09902 hypothetical protein; Provisional
Probab=86.92 E-value=4.3 Score=43.68 Aligned_cols=103 Identities=16% Similarity=0.224 Sum_probs=71.6
Q ss_pred CCCCceeeec--ccEEEEee---cCCcccccc------ccchhHHHHHHHHhhCCCCcccccceeeeeeeeeeCCceeec
Q 002526 546 NGSNPVYLMA--DCVVKIFV---EGGFESSIY------GLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIV 614 (912)
Q Consensus 546 ~GsnpV~~v~--~~v~K~~~---e~g~~~s~~------~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~~~~~~~~~~~~ 614 (912)
.|-+=||-+. +. ++|. ++-...|.+ .+-.|......|.+.+-| +|++++.+... .++.|
T Consensus 29 gG~SgV~r~~~~g~--~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP----VP~pvf~~~~k-~~~~~--- 98 (216)
T PRK09902 29 NGMSGVQCVERNGK--KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI----VPKIVFGEAVK-IEGEW--- 98 (216)
T ss_pred CCcceEEEEEeCCc--EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC----CCccceeeeec-cCCce---
Confidence 7888888766 33 5777 544444544 344688777777665554 99999666532 11111
Q ss_pred cCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCCceEEEeecCC-CchhHH-----
Q 002526 615 PWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKG-KMFAQL----- 688 (912)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiv~~r~~G-~~~~~~----- 688 (912)
=-+|||+.+.| ..+.++
T Consensus 99 ---------------------------------------------------------rA~LVTe~L~g~~~L~~~l~~~~ 121 (216)
T PRK09902 99 ---------------------------------------------------------RALLVTEDMAGFISIADWYAQHA 121 (216)
T ss_pred ---------------------------------------------------------EEEEEEEeCCCCccHHHHHhcCC
Confidence 13799999999 777775
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhhcccC
Q 002526 689 RDALSGEDVLNLASFLGEQLRNLHLLP 715 (912)
Q Consensus 689 ~~~l~~~d~~~la~~lg~~~~~lH~lp 715 (912)
++..+...+..+...+|+.++.||..-
T Consensus 122 ~~~~~~~~k~~il~~va~~ia~LH~~G 148 (216)
T PRK09902 122 VSPYSDEVRQAMLKAVALAFKKMHSVN 148 (216)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHCC
Confidence 335578889999999999999999884
No 83
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=86.52 E-value=3.7 Score=42.89 Aligned_cols=48 Identities=17% Similarity=0.060 Sum_probs=40.0
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++++|..+.+.. ..+++.....++.++.+.++.||..-..+.
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 124 (256)
T cd05059 73 PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHR 124 (256)
T ss_pred ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 789999999998777653 258899999999999999999998765443
No 84
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=86.14 E-value=0.39 Score=57.81 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=46.1
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHHhhcC
Q 002526 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKAS 70 (912)
Q Consensus 21 l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~~ 70 (912)
++.||-|+...||++|++++|.++++|||.|+.++.++..|...|.....
T Consensus 108 i~~lp~el~~~il~~Ld~~~l~~~~~v~~~w~~~~~~~~~~~~~~~~~~~ 157 (537)
T KOG0274|consen 108 LSLLPSELSLHILSFLDGRDLLAVRQVCRNWNKLLDDDKVWWRMCRELIG 157 (537)
T ss_pred hhcccchhcccccccCCHHHhhhhhhhcchhhhhhhccchhhhhhhhhcc
Confidence 56799999999999999999999999999999999999999988888653
No 85
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=86.10 E-value=3.1 Score=43.38 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=43.2
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-+||||.+|+|..+.++.. .+++++...++.++.+.|..||...+.+...
T Consensus 71 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl 123 (260)
T cd05611 71 YLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123 (260)
T ss_pred eEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 6899999999999998864 5889999999999999999999987655433
No 86
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=85.97 E-value=0.51 Score=52.88 Aligned_cols=41 Identities=20% Similarity=0.322 Sum_probs=32.6
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcch
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKC 879 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~ 879 (912)
.-|-+++|+|+|+.||+..+ +.+ +-.-.|||||-|++||..
T Consensus 197 ~~~~vlvhRDfh~~NLmw~~-----------------------~~~------g~~rvGvlDFQDA~iGP~ 237 (351)
T COG3178 197 AQPKVLVHRDFHSRNLMWTA-----------------------DRA------GADRVGVLDFQDALIGPI 237 (351)
T ss_pred cCCceeeeccccCccceecC-----------------------Ccc------CCCCCceeehhhhhcCcc
Confidence 36889999999999999976 112 233468999999999974
No 87
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=85.56 E-value=1.1 Score=51.53 Aligned_cols=36 Identities=14% Similarity=0.308 Sum_probs=29.0
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcch
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKC 879 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~ 879 (912)
+..-++||||+++.||++.+ + . ..+|||+-...|++
T Consensus 189 ~~~~~llHGDl~~gNi~~~~-------------------------~------~---~~~iD~e~~~~G~~ 224 (370)
T TIGR01767 189 ASAETLLHGDLHSGSIFVSE-------------------------H------E---TKVIDPEFAFYGPI 224 (370)
T ss_pred cCcceeeeccCCcccEEEcC-------------------------C------C---CEEEcCcccccCch
Confidence 35668999999999999955 1 1 34999999999986
No 88
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=85.24 E-value=3.5 Score=43.85 Aligned_cols=49 Identities=8% Similarity=-0.095 Sum_probs=41.9
Q ss_pred CCceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..+|+||.+++|..+++... .+++..+..++.++...|..||....-+.
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~ 133 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHR 133 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 37899999999999988764 47899999999999999999998765443
No 89
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=85.21 E-value=3.1 Score=43.12 Aligned_cols=48 Identities=17% Similarity=0.046 Sum_probs=42.1
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcc-cCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHL-LPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~-lp~~~~ 719 (912)
-+|+||.+++|..+.+... .|+++....++.++.+.+..||. ...-+.
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~ 124 (264)
T cd06623 73 EISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHR 124 (264)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 6899999999999998875 59999999999999999999999 655443
No 90
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=84.89 E-value=3.3 Score=42.09 Aligned_cols=48 Identities=19% Similarity=0.183 Sum_probs=41.5
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|++|++++|..++++.. .+++.+...++.++.+.+..||.......
T Consensus 71 ~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~ 122 (253)
T cd05122 71 ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHR 122 (253)
T ss_pred eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecC
Confidence 6899999999999998863 57999999999999999999999655443
No 91
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=84.65 E-value=4.2 Score=44.03 Aligned_cols=48 Identities=13% Similarity=0.138 Sum_probs=40.8
Q ss_pred CceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++++|.++.+... .|++.....++.++.+.+..||....-+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~ 148 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR 148 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 7899999999988877653 57899999999999999999998765443
No 92
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=84.33 E-value=3.7 Score=44.36 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||.+|.|..+.+... .|+..+...++.++.+.|..||...+.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H 163 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIH 163 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5799999999877766543 4888999999999999999999875544
No 93
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=84.19 E-value=5 Score=41.19 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=41.6
Q ss_pred CCceEEEeecCCCchhHHh------------hcCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLR------------DALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~------------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
...||||++|+|..+.+.. ..+++.+...++.++-..|..||....-+..
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d 130 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRD 130 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCc
Confidence 3789999999888777664 4578999999999999999999997654443
No 94
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=84.03 E-value=4.4 Score=40.11 Aligned_cols=27 Identities=26% Similarity=0.346 Sum_probs=24.0
Q ss_pred CEEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 332 PIECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 332 ~~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
..+..+++||+++||++..|...|.++
T Consensus 74 ~~~~~l~~GD~~~ip~g~~H~~~n~~~ 100 (146)
T smart00835 74 VYDARLREGDVFVVPQGHPHFQVNSGD 100 (146)
T ss_pred EEEEEecCCCEEEECCCCEEEEEcCCC
Confidence 467889999999999999999999863
No 95
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=83.58 E-value=5.7 Score=42.20 Aligned_cols=50 Identities=8% Similarity=0.073 Sum_probs=43.2
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-+|+||++|+|..+.++.. .|+..+...++.++.+.|+.||...+.+...
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl 142 (286)
T cd06614 89 ELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDI 142 (286)
T ss_pred EEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCC
Confidence 5799999999989988866 5889999999999999999999977655543
No 96
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=83.34 E-value=4.5 Score=41.51 Aligned_cols=50 Identities=16% Similarity=0.024 Sum_probs=43.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
.+|+||.+++|..++++.. .|+++....++.++.+.+..||...+.+...
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 125 (254)
T cd06627 73 SLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDI 125 (254)
T ss_pred EEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence 6899999999999988765 5899999999999999999999987665443
No 97
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=83.06 E-value=5.4 Score=42.58 Aligned_cols=48 Identities=4% Similarity=-0.002 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHhh-------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|+|-.|.+... .++..+...++.+|.+.|+.||.....+.
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 143 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 143 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 6899999999988877754 23567888999999999999998765443
No 98
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=82.96 E-value=6.6 Score=40.78 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=40.1
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.+|+||.+|+|..+.+... .++++....++.++...|+.||...+.+.+
T Consensus 72 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 125 (255)
T cd08219 72 HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRD 125 (255)
T ss_pred EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 6899999999977766432 478899999999999999999997655543
No 99
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=82.81 E-value=1.3 Score=54.92 Aligned_cols=53 Identities=23% Similarity=0.503 Sum_probs=43.4
Q ss_pred CCCCce-EEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 669 NRIWPY-IITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 669 ~~~WpY-iv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
+..|-| |.|++|+|..+-+++- .|++.+++.+..++.+-++.||.++.|=+-.
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHR 170 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHR 170 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchh
Confidence 435654 6799999877776665 8999999999999999999999999765433
No 100
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=82.47 E-value=5.1 Score=42.53 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=26.4
Q ss_pred EEEEcCCCEEEeCCCCceeeEeCC---CcEEEeeccc
Q 002526 334 ECTQLPGETIVVPSGWWHCILNLE---TTIAVTQNFV 367 (912)
Q Consensus 334 E~vLePGDvLFVPsGWWHqV~NLd---dSIAVn~NFv 367 (912)
.+.-++|++|+.|+.-||.|..-. +=|+|++|+.
T Consensus 163 ~v~P~~G~lvlFPS~L~H~v~p~~~~~~RISiSFNl~ 199 (201)
T TIGR02466 163 YVPPQEGRVLLFESWLRHEVPPNESEEERISVSFNYA 199 (201)
T ss_pred EECCCCCeEEEECCCCceecCCCCCCCCEEEEEEeeE
Confidence 344589999999999999998763 4577776654
No 101
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=82.44 E-value=6.8 Score=41.52 Aligned_cols=50 Identities=14% Similarity=0.002 Sum_probs=41.8
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-.||||++++|..+.+... .+++.....++.++.+.|..||.....+.+.
T Consensus 76 ~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl 127 (277)
T cd06640 76 KLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 127 (277)
T ss_pred EEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCC
Confidence 5799999999988877654 5889999999999999999999887655433
No 102
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=82.30 E-value=0.94 Score=57.75 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=16.3
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
.+-+|||||+|||+++..
T Consensus 812 ~~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 812 AMGIIHGDIKPDNFLLRR 829 (974)
T ss_pred hcceecccCCcceeEeec
Confidence 688999999999998866
No 103
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=82.27 E-value=3.5 Score=43.74 Aligned_cols=42 Identities=10% Similarity=0.091 Sum_probs=37.6
Q ss_pred CceEEEeecCCCchhHHhh------cCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRD------ALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~------~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
.+|+||.+|+|..+.++.. .+++.....++.++.+.|..||.
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999988887754 58899999999999999999994
No 104
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=82.18 E-value=0.75 Score=54.72 Aligned_cols=19 Identities=37% Similarity=0.737 Sum_probs=17.4
Q ss_pred CCCceEeccccCCceeeec
Q 002526 811 KPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 811 ~~~~~iH~d~m~~ni~~~~ 829 (912)
+-|-+||.||.||||||-+
T Consensus 553 K~c~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNE 571 (752)
T ss_pred HhcCeeecccCccceEecc
Confidence 5688999999999999977
No 105
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=82.17 E-value=5.8 Score=45.76 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=44.7
Q ss_pred EEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCE
Q 002526 254 VIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPI 333 (912)
Q Consensus 254 L~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~ 333 (912)
+-+.| |...++|.+... -|..++.|+=+..+.-.. .+.+
T Consensus 72 ~~l~p-G~~~~~HwH~~~--E~~yVl~G~~~v~~~d~~--------------------------------------g~~~ 110 (367)
T TIGR03404 72 MRLEP-GAIRELHWHKEA--EWAYVLYGSCRITAVDEN--------------------------------------GRNY 110 (367)
T ss_pred EEEcC-CCCCCcccCCCc--eEEEEEeeEEEEEEEcCC--------------------------------------CcEE
Confidence 33443 445678887543 388889887555543221 1234
Q ss_pred EEEEcCCCEEEeCCCCceeeEeCCCc
Q 002526 334 ECTQLPGETIVVPSGWWHCILNLETT 359 (912)
Q Consensus 334 E~vLePGDvLFVPsGWWHqV~NLddS 359 (912)
...+++||++|||+|..|...|.++.
T Consensus 111 ~~~L~~GD~~~fP~g~~H~~~n~~~~ 136 (367)
T TIGR03404 111 IDDVGAGDLWYFPPGIPHSLQGLDEG 136 (367)
T ss_pred EeEECCCCEEEECCCCeEEEEECCCC
Confidence 45799999999999999999998653
No 106
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=82.04 E-value=6.9 Score=41.03 Aligned_cols=48 Identities=8% Similarity=0.050 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+||||.+++|..+.+... .+++..+..++.++...+..||....-+.
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~ 130 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHR 130 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 5799999999988888753 58999999999999999999999765443
No 107
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=81.94 E-value=5.2 Score=43.26 Aligned_cols=48 Identities=25% Similarity=0.205 Sum_probs=41.5
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|.|.++.+... .+++.....++.++.+.|..||.....+.
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 127 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYR 127 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 6899999999999988764 58899999999999999999998865443
No 108
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=81.82 E-value=5.7 Score=40.99 Aligned_cols=49 Identities=14% Similarity=0.046 Sum_probs=40.8
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.+|+||+++.|..+.+... .+++.....++.++.+.|..||.....+..
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~d 126 (256)
T cd08529 73 KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRD 126 (256)
T ss_pred EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 7899999999988877643 577889999999999999999987655443
No 109
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=81.80 E-value=2.7 Score=43.91 Aligned_cols=47 Identities=15% Similarity=0.118 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHhh----------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++++|..+.+... .++..+...+|.++.+.|+.||....-+
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H 129 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIH 129 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5899999999977766542 3778999999999999999999876433
No 110
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=81.76 E-value=5.2 Score=42.32 Aligned_cols=48 Identities=17% Similarity=0.019 Sum_probs=40.9
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+|+|..+.+... .++++.+..+|.++.+.+..||.....+.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~ 125 (277)
T cd06642 76 KLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 125 (277)
T ss_pred ceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeecc
Confidence 5799999999988887654 57899999999999999999998765544
No 111
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=81.51 E-value=4.4 Score=37.68 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=22.2
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEeCC---CcEEEeec
Q 002526 331 KPIECTQLPGETIVVPSGWWHCILNLE---TTIAVTQN 365 (912)
Q Consensus 331 ~~~E~vLePGDvLFVPsGWWHqV~NLd---dSIAVn~N 365 (912)
..+.+..++|++|+.|+.-+|.|..-. +=|+|++|
T Consensus 64 ~~~~~~p~~G~lvlFPs~l~H~v~p~~~~~~RisisfN 101 (101)
T PF13759_consen 64 PYYIVEPEEGDLVLFPSWLWHGVPPNNSDEERISISFN 101 (101)
T ss_dssp SEEEE---TTEEEEEETTSEEEE----SSS-EEEEEEE
T ss_pred ceEEeCCCCCEEEEeCCCCEEeccCcCCCCCEEEEEcC
Confidence 457788899999999999999997754 34666654
No 112
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=81.42 E-value=5 Score=40.85 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=48.6
Q ss_pred CcceEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCC
Q 002526 250 SYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADD 329 (912)
Q Consensus 250 d~rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a 329 (912)
++..+++|.+...+-+|+++.. -|..|+.|.=...+...
T Consensus 33 ~f~VmvVGGPN~R~DyHine~e--E~FyQ~kG~m~Lkv~e~--------------------------------------- 71 (151)
T PF06052_consen 33 DFIVMVVGGPNQRTDYHINETE--EFFYQLKGDMCLKVVED--------------------------------------- 71 (151)
T ss_dssp SEEEEEEESSB--SSEEE-SS---EEEEEEES-EEEEEEET---------------------------------------
T ss_pred CeEEEEEcCCCCCCccccCCcc--eEEEEEeCcEEEEEEeC---------------------------------------
Confidence 4566889999999999999975 49999998533322211
Q ss_pred CCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEee
Q 002526 330 DKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQ 364 (912)
Q Consensus 330 ~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~ 364 (912)
.+.-++.+++||+.++|++-.|.-.-.++||.+-.
T Consensus 72 g~~kdi~I~EGe~fLLP~~vpHsP~R~~~tiGLVi 106 (151)
T PF06052_consen 72 GKFKDIPIREGEMFLLPANVPHSPQRPADTIGLVI 106 (151)
T ss_dssp TEEEEEEE-TTEEEEE-TT--EEEEE-TT-EEEEE
T ss_pred CceEEEEeCCCcEEecCCCCCCCCcCCCCcEEEEE
Confidence 12356889999999999999999999999999865
No 113
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=81.41 E-value=5.8 Score=42.01 Aligned_cols=47 Identities=15% Similarity=0.069 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh----------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++++|.++.++.+ .+++.+...++.++.+.+..||..-..+
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 139 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIH 139 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4699999999998888754 4788999999999999999999875433
No 114
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=81.25 E-value=7.6 Score=40.39 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=41.3
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+||.+++|..+.+... .++++.+..++.++...++.||.....+.
T Consensus 75 ~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~ 127 (261)
T cd05034 75 PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHR 127 (261)
T ss_pred ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 5799999999988887763 58899999999999999999998876554
No 115
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=81.21 E-value=6.5 Score=41.72 Aligned_cols=47 Identities=15% Similarity=0.006 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.++.|..+.+... .+++.++..++.++...+..||....-+
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H 130 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIH 130 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 6799999999998888755 7899999999999999999999875443
No 116
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=81.10 E-value=6.8 Score=41.25 Aligned_cols=50 Identities=12% Similarity=0.094 Sum_probs=42.3
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-+|+||.+++|..+.++.. .|+++....++.++.+.|+.||...+.+...
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl 127 (277)
T cd06917 76 RLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDI 127 (277)
T ss_pred EEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 5799999999988887653 6889999999999999999999987655443
No 117
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=80.79 E-value=5.3 Score=43.01 Aligned_cols=47 Identities=11% Similarity=0.129 Sum_probs=38.2
Q ss_pred CceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||++|+|..|.+... .++......++.++.+.|..||...+-+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH 160 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIH 160 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4689999999877776543 4778889999999999999999886433
No 118
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=80.72 E-value=6 Score=42.91 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=38.2
Q ss_pred CceEEEeecCCCchhHHhhc-----CCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRDA-----LSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~-----l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
.+|+||+++.|..+.+.... |++.+...++.++...|..||...+
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i 162 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC 162 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 58999999998777766432 8899999999999999999998754
No 119
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=80.68 E-value=7.9 Score=41.27 Aligned_cols=48 Identities=8% Similarity=-0.127 Sum_probs=41.6
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..||||.+|+|..+..... .+++..+..++.++.+-|..||...+.+.
T Consensus 90 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~ 141 (274)
T cd05076 90 ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHG 141 (274)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 7899999999988887653 58899999999999999999999876543
No 120
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=80.49 E-value=7.8 Score=41.24 Aligned_cols=43 Identities=12% Similarity=-0.028 Sum_probs=37.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhccc
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
.+|+||++++|..+.++.. .+++.....++.++.+.|..||..
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 122 (284)
T cd06620 77 NICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122 (284)
T ss_pred EEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999998987764 478899999999999999999963
No 121
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=80.25 E-value=7.7 Score=40.07 Aligned_cols=47 Identities=17% Similarity=0.190 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||.+|+|..+.+... .++++....++.++.+.|..||....-+
T Consensus 66 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H 116 (250)
T cd05085 66 PIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIH 116 (250)
T ss_pred ccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 5799999999988877643 4788999999999999999999765433
No 122
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=80.23 E-value=2.1 Score=36.30 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=42.5
Q ss_pred CCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEE
Q 002526 258 PQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQ 337 (912)
Q Consensus 258 p~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vL 337 (912)
++|...+.|.++.. .-+..++.|+-.+.+ ..-...+
T Consensus 6 ~pG~~~~~h~H~~~-~e~~~vl~G~~~~~~-------------------------------------------~~~~~~l 41 (71)
T PF07883_consen 6 PPGGSIPPHRHPGE-DEFFYVLSGEGTLTV-------------------------------------------DGERVEL 41 (71)
T ss_dssp ETTEEEEEEEESSE-EEEEEEEESEEEEEE-------------------------------------------TTEEEEE
T ss_pred CCCCCCCCEECCCC-CEEEEEEECCEEEEE-------------------------------------------ccEEeEc
Confidence 35557788887764 258888888744331 0124779
Q ss_pred cCCCEEEeCCCCceeeEeCCCc
Q 002526 338 LPGETIVVPSGWWHCILNLETT 359 (912)
Q Consensus 338 ePGDvLFVPsGWWHqV~NLddS 359 (912)
+|||++++|++=+|++.|.++.
T Consensus 42 ~~Gd~~~i~~~~~H~~~n~~~~ 63 (71)
T PF07883_consen 42 KPGDAIYIPPGVPHQVRNPGDE 63 (71)
T ss_dssp ETTEEEEEETTSEEEEEEESSS
T ss_pred cCCEEEEECCCCeEEEEECCCC
Confidence 9999999999999999999754
No 123
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=80.19 E-value=9.2 Score=36.99 Aligned_cols=68 Identities=18% Similarity=0.216 Sum_probs=48.0
Q ss_pred eEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCC
Q 002526 253 WVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKP 332 (912)
Q Consensus 253 wL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~ 332 (912)
.++-..+|..+++|..|.. .....++.|+=++.+- .
T Consensus 46 ~~v~~~~G~~~~~H~hp~~-~~~~~Vl~G~~~~~~~-------------------------------------------g 81 (131)
T COG1917 46 VLVTFEPGAVIPWHTHPLG-EQTIYVLEGEGTVQLE-------------------------------------------G 81 (131)
T ss_pred EEEEECCCcccccccCCCc-ceEEEEEecEEEEEec-------------------------------------------C
Confidence 3556678999999999832 2466667765322211 1
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCCc--EEEee
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLETT--IAVTQ 364 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLddS--IAVn~ 364 (912)
-..++++||+++||+|=.|.+.+.+++ +-|..
T Consensus 82 ~~~~l~~Gd~i~ip~g~~H~~~a~~~~~~~~l~v 115 (131)
T COG1917 82 EKKELKAGDVIIIPPGVVHGLKAVEDEPMVLLLV 115 (131)
T ss_pred CceEecCCCEEEECCCCeeeeccCCCCceeEEEE
Confidence 224588999999999999999999987 55544
No 124
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=80.14 E-value=8.5 Score=40.18 Aligned_cols=48 Identities=10% Similarity=0.019 Sum_probs=40.9
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+||.+++|..+.++.. .++++....++.++.+.|+.||...+.+.
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 130 (267)
T cd08228 76 ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHR 130 (267)
T ss_pred eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCC
Confidence 7899999999988887664 37888999999999999999998765443
No 125
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=79.99 E-value=7.6 Score=41.01 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=40.2
Q ss_pred CceEEEeecCCCchhHHh-------------------hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------------------DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------------------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
+.|++|.++.|..+.+.. ..|++.....++.++.+.|+.||...+.+.
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~ 148 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHR 148 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 789999999998777665 347888999999999999999998865543
No 126
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=79.78 E-value=2 Score=41.90 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=23.8
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
-++.+++||++|||+|=.|.++|.+.
T Consensus 75 ~~~~v~~gd~~~iP~g~~H~~~N~G~ 100 (127)
T COG0662 75 EEVEVKAGDSVYIPAGTPHRVRNTGK 100 (127)
T ss_pred EEEEecCCCEEEECCCCcEEEEcCCC
Confidence 45779999999999999999999986
No 127
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=79.61 E-value=5.9 Score=42.75 Aligned_cols=46 Identities=13% Similarity=0.007 Sum_probs=39.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
+.||||.+|.|..++.+.. .+++++...++.++-+.|..||...+-
T Consensus 77 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 125 (303)
T cd07869 77 TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYIL 125 (303)
T ss_pred eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 7899999999977776654 488999999999999999999987543
No 128
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=79.46 E-value=9.7 Score=39.56 Aligned_cols=48 Identities=15% Similarity=-0.042 Sum_probs=41.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||.+++|..+.+... .++++....++.++.+.|+.||...+.+.
T Consensus 78 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 128 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHR 128 (263)
T ss_pred eEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 8999999999988887765 57899999999999999999998765443
No 129
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=79.44 E-value=2.1 Score=48.32 Aligned_cols=51 Identities=24% Similarity=0.499 Sum_probs=36.5
Q ss_pred HHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 765 NLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 765 ~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
++...|+..-+|+|++++.++ | ..+|.-..= |-.--.||+||+||||++..
T Consensus 86 TvL~eLe~~p~G~~~~~vk~~---l----~Q~l~ai~~-------cHk~n~IHRDIKPENILit~ 136 (396)
T KOG0593|consen 86 TVLHELERYPNGVPSELVKKY---L----YQLLKAIHF-------CHKNNCIHRDIKPENILITQ 136 (396)
T ss_pred HHHHHHHhccCCCCHHHHHHH---H----HHHHHHhhh-------hhhcCeecccCChhheEEec
Confidence 677888888889999988764 3 233322111 44445899999999999977
No 130
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=79.35 E-value=8.4 Score=40.42 Aligned_cols=48 Identities=8% Similarity=-0.045 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
=+|+||++|+|..+.+... .+++.....++.+|.+.|..||..-+.+.
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~ 133 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHR 133 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 3799999999988888876 38899999999999999999998765443
No 131
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=79.17 E-value=6 Score=40.71 Aligned_cols=48 Identities=17% Similarity=0.066 Sum_probs=41.6
Q ss_pred CceEEEeecCCCchhHHhhc-----CCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDA-----LSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~-----l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|.|..+.+.... +++.....++.++.+.++.||.......
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~ 127 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHR 127 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 68999999999888776642 8999999999999999999999976554
No 132
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=79.08 E-value=8 Score=40.64 Aligned_cols=46 Identities=7% Similarity=0.038 Sum_probs=39.9
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
.+|+||++++|..+.+... .++..+...++.++.+.++.||.....
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 128 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYV 128 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 6899999999988887764 478899999999999999999987543
No 133
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=78.76 E-value=9.6 Score=38.11 Aligned_cols=49 Identities=22% Similarity=0.211 Sum_probs=41.9
Q ss_pred CceEEEeecCCCchhHHhhc----CCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDA----LSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~----l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.|+||.++.|..+.+..+. +++.+...++.++.+.++.||.....+.+
T Consensus 71 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 123 (225)
T smart00221 71 PLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRD 123 (225)
T ss_pred ceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 57899999999888888664 89999999999999999999998655543
No 134
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=78.53 E-value=5.6 Score=43.14 Aligned_cols=38 Identities=11% Similarity=0.200 Sum_probs=29.7
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhccc
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
=.||||++|+|..++++ ..+++ .+...+++.++.+|..
T Consensus 117 ~~~lvmEyi~G~tL~~~-~~~~~----~~~~~i~~~l~~lH~~ 154 (232)
T PRK10359 117 TYIMLIEYIEGVELNDM-PEISE----DVKAKIKASIESLHQH 154 (232)
T ss_pred CeEEEEEEECCccHHHh-hhccH----HHHHHHHHHHHHHHHc
Confidence 46999999999999887 33443 3456889999999975
No 135
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=78.45 E-value=11 Score=39.06 Aligned_cols=50 Identities=16% Similarity=0.106 Sum_probs=42.1
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-.||+|+++.|..+.++. ..|++.+...++.++.+.|..||..-+.+.+.
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl 127 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDI 127 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Confidence 479999999998888765 46889999999999999999999886655433
No 136
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=78.35 E-value=7.4 Score=41.90 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=38.1
Q ss_pred CceEEEeecCCCchhHHhh----------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|+|..+.+... .+++.....++.++.+.|+.||...+-+
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 93 PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4799999999987776542 3677888999999999999999876533
No 137
>PF13013 F-box-like_2: F-box-like domain
Probab=78.28 E-value=3.5 Score=39.86 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=37.6
Q ss_pred CcccCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHH
Q 002526 14 RPDALGDLKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSL 64 (912)
Q Consensus 14 R~~~LG~l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l 64 (912)
..+++ .+..||+||+..|+.+++..++..+..+|+.++-.... +|..+
T Consensus 16 ~~~~l-tl~DLP~ELl~~I~~~C~~~~l~~l~~~~~~~r~~r~~--~~~~L 63 (109)
T PF13013_consen 16 NRQSL-TLLDLPWELLQLIFDYCNDPILLALSRTCRAYRSWRDH--IWYLL 63 (109)
T ss_pred Ccccc-chhhChHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH--HHHHh
Confidence 33455 56779999999999999999999999999977755444 45444
No 138
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=78.04 E-value=5.6 Score=43.37 Aligned_cols=47 Identities=23% Similarity=0.135 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||++|+|..+.+... .|++++...++.++.+.|+.||..-+-+
T Consensus 72 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 72 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 5799999999877766543 5899999999999999999999876544
No 139
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=77.94 E-value=6.2 Score=42.13 Aligned_cols=47 Identities=9% Similarity=-0.071 Sum_probs=40.1
Q ss_pred CceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..+.... ..|+++....++.++.+.|..||....-+
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 689999999998887553 35899999999999999999999976544
No 140
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=77.72 E-value=8.2 Score=40.15 Aligned_cols=45 Identities=13% Similarity=0.018 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcc-cCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHL-LPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~-lp~ 716 (912)
-+||||.+|.|..+.++.. .+++.....++.+|.+.|..||. ...
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i 122 (265)
T cd06605 73 DISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122 (265)
T ss_pred EEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 6899999999988888775 56788999999999999999999 543
No 141
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=77.59 E-value=7 Score=41.28 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=41.3
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..||||++|+|..+.++.. .|++.....++.++.+.|..||..-+.+.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~ 127 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 7899999999988887753 58999999999999999999998755444
No 142
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=77.30 E-value=11 Score=40.65 Aligned_cols=47 Identities=11% Similarity=-0.049 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|.|...+.+.. .++......++.++.+.|..||...+-+
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH 127 (309)
T cd07872 78 SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLH 127 (309)
T ss_pred eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 6899999999966655543 4889999999999999999999876544
No 143
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=77.22 E-value=8.4 Score=40.33 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|++|++++|..+.+... .++......++.+|.+.|+.||....-+.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~ 126 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 126 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 6899999999877777654 36778889999999999999998765443
No 144
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=77.22 E-value=11 Score=39.11 Aligned_cols=50 Identities=10% Similarity=0.003 Sum_probs=41.3
Q ss_pred CceEEEeecCCCchhHHhh------cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD------ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~------~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-+||||.+|+|..+.+... .+++.....++.+|.+.|+.||.......+.
T Consensus 73 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l 128 (267)
T cd06610 73 ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDI 128 (267)
T ss_pred EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 5799999999977776653 4788899999999999999999887655543
No 145
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=77.09 E-value=9.4 Score=40.14 Aligned_cols=47 Identities=11% Similarity=0.121 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||.+++|..+.+.. ..+++.++..++.++.+.|..||.....+
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 118 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVH 118 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 579999999998777654 36899999999999999999999875443
No 146
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=77.02 E-value=9.5 Score=40.75 Aligned_cols=48 Identities=17% Similarity=0.222 Sum_probs=41.1
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++++|..+..+. ..|+++....++.+|.+.+..||...+-+.
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 134 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHR 134 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 789999999999887653 358999999999999999999998765443
No 147
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=76.96 E-value=9.8 Score=41.89 Aligned_cols=43 Identities=14% Similarity=0.007 Sum_probs=38.1
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhccc
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
-.||||.+|+|..+.++.. .+++.....++.++.+.|..||.-
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 5799999999999988764 588999999999999999999963
No 148
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=76.96 E-value=12 Score=38.98 Aligned_cols=48 Identities=17% Similarity=0.085 Sum_probs=39.9
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..||||++|+|..+.+... .++++....++.++.+.|..||.....+.
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHR 124 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 5799999999877766543 48899999999999999999998875553
No 149
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=76.83 E-value=13 Score=39.01 Aligned_cols=49 Identities=16% Similarity=0.104 Sum_probs=41.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.||||++++|..+.++.. .+++.++..++.++.+.|..||...+.+.+
T Consensus 80 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 131 (267)
T cd06646 80 KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRD 131 (267)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 4699999999988887643 689999999999999999999998765543
No 150
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=76.75 E-value=10 Score=40.10 Aligned_cols=48 Identities=13% Similarity=0.021 Sum_probs=40.0
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||.++.|..+.+.. ..+++.....++.++.+.++.||.-.+.+.
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~ 133 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHR 133 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEec
Confidence 689999999987776653 358999999999999999999999754443
No 151
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=76.62 E-value=8.9 Score=40.33 Aligned_cols=47 Identities=15% Similarity=0.077 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++|.|..|.+... .|++.++..++.+|.+.|+.||..-+-+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H 140 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVH 140 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCccc
Confidence 5799999999888876643 4889999999999999999999875443
No 152
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=76.36 E-value=1.6 Score=52.15 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=15.4
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
.+-+||+||+|||||+..
T Consensus 192 ~~GIIHRDlKPENILLd~ 209 (604)
T KOG0592|consen 192 SNGIIHRDLKPENILLDK 209 (604)
T ss_pred hcCceeccCChhheeEcC
Confidence 456899999999999954
No 153
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=76.24 E-value=15 Score=38.32 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=40.3
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++|+|.++.+... .++++.+..++.++.+.++.||.....+
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 126 (261)
T cd05068 75 PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIH 126 (261)
T ss_pred CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 6799999999988887753 5889999999999999999999876544
No 154
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=76.16 E-value=11 Score=39.91 Aligned_cols=47 Identities=11% Similarity=0.025 Sum_probs=39.7
Q ss_pred CceEEEeecCCCchhHHh--------------------hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR--------------------DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~--------------------~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++++|.++.+.. ..|++.+...++.++...|..||...+.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H 147 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVH 147 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeeh
Confidence 689999999998887765 25788999999999999999999876443
No 155
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=75.88 E-value=12 Score=38.86 Aligned_cols=48 Identities=17% Similarity=0.121 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+||.+++|..+.+... .++++....++.++.+.|+.||.-...+.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 126 (256)
T cd05082 74 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHR 126 (256)
T ss_pred ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence 6899999999977776533 37889999999999999999998865443
No 156
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=75.76 E-value=1.5 Score=53.15 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=26.6
Q ss_pred CCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 776 PIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 776 ~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
|||-.++..+--=+=.-+..| ..-.+||.||+|||||...
T Consensus 285 Glsl~~ir~~~~Qil~~L~~L--------------~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 285 GLSLPLVRKFAQQILTALLFL--------------HELGIIHCDLKPENILLKD 324 (586)
T ss_pred CCCHHHHHHHHHHHHHHHHHH--------------HhCCeeeccCChhheeecc
Confidence 588777766654332111222 3568999999999999955
No 157
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=75.74 E-value=12 Score=38.65 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=41.4
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.+|+||++|+|..+.+... .++++....++.++.+.|..||..-..+.+
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~d 126 (257)
T cd08225 73 RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRD 126 (257)
T ss_pred eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 7899999999988877654 378999999999999999999987655543
No 158
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=75.74 E-value=13 Score=39.86 Aligned_cols=48 Identities=15% Similarity=0.098 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHhh--------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+||++++|-++.+... .++......++.++...++.||...+.+.
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~ 154 (296)
T cd05095 93 PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHR 154 (296)
T ss_pred ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 5799999999877777654 36677899999999999999999865443
No 159
>COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=75.72 E-value=2.8 Score=41.11 Aligned_cols=25 Identities=28% Similarity=0.331 Sum_probs=22.7
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLE 357 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLd 357 (912)
..++..|||.+|||+|=.||-.|+.
T Consensus 88 ~ha~~~pGDf~YiPpgVPHqp~N~S 112 (142)
T COG4101 88 EHAEVGPGDFFYIPPGVPHQPANLS 112 (142)
T ss_pred eeEEecCCCeEEcCCCCCCcccccC
Confidence 4478899999999999999999986
No 160
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=75.72 E-value=11 Score=39.60 Aligned_cols=47 Identities=9% Similarity=0.046 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++++|..+.+... .++..+...++.++.+.++.||....-+
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H 129 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVH 129 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 5799999999988876643 5889999999999999999999876543
No 161
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=75.41 E-value=1.8 Score=52.69 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=15.1
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-|||+||+|||||+..
T Consensus 748 mGFIHRDiKPDNILIDr 764 (1034)
T KOG0608|consen 748 MGFIHRDIKPDNILIDR 764 (1034)
T ss_pred ccceecccCccceEEcc
Confidence 35899999999999966
No 162
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=75.41 E-value=11 Score=38.89 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=41.7
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
..|+||++++|..+.+... .+++..+..++.++-+.|..||...+.+.+.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl 127 (256)
T cd08220 73 ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDL 127 (256)
T ss_pred EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 6799999999988887764 3788899999999999999999876655543
No 163
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=75.40 E-value=8.9 Score=42.82 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||.+|.|..+.+... .++++....++.++.+.|..||..-+
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 152 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI 152 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6899999999988776654 68899999999999999999998754
No 164
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=75.35 E-value=1.3 Score=45.83 Aligned_cols=14 Identities=21% Similarity=0.508 Sum_probs=13.0
Q ss_pred eEeccccCCceeee
Q 002526 815 WIHSDIMDDNVYME 828 (912)
Q Consensus 815 ~iH~d~m~~ni~~~ 828 (912)
+||+||+|+||++.
T Consensus 139 iiHrDlkP~NIli~ 152 (190)
T cd05147 139 LVHADLSEYNLLYH 152 (190)
T ss_pred cccCCCCHHHEEEE
Confidence 79999999999994
No 165
>TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase. This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases are excluded by a relatively high trusted cutoff score because they are too closely related to known examples of 1-hydroxy-2-naphthoate dioxygenase. Therefore some homologs may be bona fide gentisate 1,2-dioxygenases even if they score below the given cutoffs.
Probab=75.29 E-value=8.1 Score=44.17 Aligned_cols=48 Identities=25% Similarity=0.277 Sum_probs=34.6
Q ss_pred CEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecccCCCCHHHHHHhhccCc
Q 002526 332 PIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVCLDFAPGY 383 (912)
Q Consensus 332 ~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~~NL~~vl~dl~~gf 383 (912)
..++..++||++.+|++.||.=.|.++...|-. +..+++.+ ..|.-+|
T Consensus 119 g~~~~~~~gD~~~tP~w~wH~H~n~~d~~~~wl---d~lD~Pl~-~~l~~~f 166 (335)
T TIGR02272 119 GERTTMHPGDFIITPSWTWHDHGNPGDEPMIWL---DGLDIPLV-QLFDCSF 166 (335)
T ss_pred CEEEeeeCCCEEEeCCCeeEecccCCCCcEEEE---ecCCHHHH-HhhCcce
Confidence 356789999999999999999999887665543 34455543 4444445
No 166
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=75.18 E-value=8.3 Score=42.48 Aligned_cols=47 Identities=11% Similarity=-0.049 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|.|..+.+.. ..++++....++.++.+.|..||...+-+
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 141 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIY 141 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 579999999997766543 26889999999999999999999876443
No 167
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=74.68 E-value=12 Score=39.64 Aligned_cols=48 Identities=17% Similarity=0.104 Sum_probs=40.9
Q ss_pred ceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.|+||++|+|..+.+... .++++....++.+|...+..||.....+..
T Consensus 77 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 126 (277)
T cd06641 77 LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 126 (277)
T ss_pred EEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCC
Confidence 689999999988887654 588999999999999999999987665543
No 168
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=74.48 E-value=15 Score=38.30 Aligned_cols=49 Identities=10% Similarity=0.063 Sum_probs=41.4
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.|+||++++|..+.+... .|++.....++.++.+.|+.||.....+.+
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~d 118 (262)
T cd05572 67 YIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRD 118 (262)
T ss_pred ccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 6899999999988887643 689999999999999999999987655543
No 169
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=74.46 E-value=17 Score=38.52 Aligned_cols=48 Identities=13% Similarity=0.057 Sum_probs=37.9
Q ss_pred CCceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
...|+||.+|.|...+.+.. .++++....++.++.+.|..||...+-+
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH 133 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH 133 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 36899999999854444332 4889999999999999999999875444
No 170
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=74.29 E-value=8.8 Score=40.51 Aligned_cols=49 Identities=10% Similarity=0.037 Sum_probs=42.3
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.|+||++|+|..+.++.. .+++.....++.++.+.|+.||...+.+.+
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~ 125 (286)
T cd07846 74 RLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRD 125 (286)
T ss_pred eEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 5799999999998887754 589999999999999999999998765543
No 171
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=74.19 E-value=8 Score=42.97 Aligned_cols=45 Identities=18% Similarity=0.201 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||++|.|-.+.+.. ..|++.....++.++.+.|..||..-.
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 122 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY 122 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 789999999998777664 368999999999999999999998753
No 172
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=73.91 E-value=11 Score=41.28 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=37.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
..||||++|.|..+..... .++++....++.+|.+.|..||.
T Consensus 69 ~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~ 113 (325)
T cd05594 69 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 113 (325)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999988776543 58999999999999999999996
No 173
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=73.67 E-value=17 Score=38.09 Aligned_cols=47 Identities=15% Similarity=0.040 Sum_probs=39.5
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++++|..+.+... .|++.....++.++.+.|+.||....-+
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 127 (263)
T cd05052 76 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127 (263)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 3689999999988887653 4889999999999999999999875433
No 174
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=73.67 E-value=15 Score=38.75 Aligned_cols=47 Identities=11% Similarity=-0.026 Sum_probs=36.8
Q ss_pred CceEEEeecCCCchhHHh-----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||+++.|.....+. ..|+++....++.++.+.|..||..-+-+
T Consensus 72 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h 123 (284)
T cd07836 72 KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLH 123 (284)
T ss_pred cEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 469999999984333332 24899999999999999999999875433
No 175
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=73.13 E-value=14 Score=39.44 Aligned_cols=47 Identities=13% Similarity=0.028 Sum_probs=40.4
Q ss_pred CceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++++|..+.+... .|+++....++.++...++.||....-+
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H 146 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVH 146 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 6899999999998888753 3789999999999999999999886544
No 176
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=73.13 E-value=15 Score=46.89 Aligned_cols=43 Identities=28% Similarity=0.296 Sum_probs=40.2
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhccc
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
-+||||++|+|..+.++...|+++.+..+|.++.+-|+.||.-
T Consensus 757 ~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~ 799 (968)
T PLN00113 757 GAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCR 799 (968)
T ss_pred CCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccC
Confidence 4799999999999999999999999999999999999999943
No 177
>PF05523 FdtA: WxcM-like, C-terminal ; InterPro: IPR008894 This entry includes FdtA (Q6T1W8 from SWISSPROT) from Aneurinibacillus thermoaerophilus, which has been characterised as a dTDP-6-deoxy-3,4-keto-hexulose isomerase []. It also includes WxcM (Q93S92 from SWISSPROT) from Xanthomonas campestris pv campestris) []. ; PDB: 2PAK_A 2PAE_A 2PA7_B 2PAM_A.
Probab=73.04 E-value=11 Score=37.22 Aligned_cols=76 Identities=22% Similarity=0.337 Sum_probs=37.8
Q ss_pred ceEEe--cCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCC
Q 002526 252 RWVII--GPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADD 329 (912)
Q Consensus 252 rwL~I--Gp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a 329 (912)
|..++ -|.|..-.+|.+... .-+.+.++|+=+..+....
T Consensus 33 rvy~i~~~~~~~~RG~H~Hk~~-~~~~~~l~Gs~~v~~~d~~-------------------------------------- 73 (131)
T PF05523_consen 33 RVYYIYNVPPGVIRGWHAHKKT-TQWFIVLSGSFKVVLDDGR-------------------------------------- 73 (131)
T ss_dssp EEEEEES--SS--EEEEEESS---EEEEEEES-EEEEEE-SS--------------------------------------
T ss_pred EEEEEEcCCCCCcccccccccc-cEEEEEEeCEEEEEEecCC--------------------------------------
Confidence 34444 445555678887765 4688889998666533211
Q ss_pred CCCEEEEEcCC-CEEEeCCCCceeeEeCCCcEEEeecccC
Q 002526 330 DKPIECTQLPG-ETIVVPSGWWHCILNLETTIAVTQNFVD 368 (912)
Q Consensus 330 ~~~~E~vLePG-DvLFVPsGWWHqV~NLddSIAVn~NFv~ 368 (912)
...+++|... ..|+||+|+||...+.++. ||-..+.+
T Consensus 74 -~~~~~~L~~~~~~L~Ippg~w~~~~~~s~~-svlLv~as 111 (131)
T PF05523_consen 74 -EEEEFILDEPNKGLYIPPGVWHGIKNFSED-SVLLVLAS 111 (131)
T ss_dssp --EEEEEE--TTEEEEE-TT-EEEEE---TT--EEEEEES
T ss_pred -CcEEEEECCCCeEEEECCchhhHhhccCCC-cEEEEEcC
Confidence 1133445444 4899999999999999865 55444444
No 178
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=72.72 E-value=11 Score=41.31 Aligned_cols=47 Identities=21% Similarity=0.216 Sum_probs=40.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||++|+|..|.+... .|+++....++.++.+.|..||..-+-+
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH 124 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIH 124 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5799999999999988864 5889999999999999999999875443
No 179
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=72.72 E-value=16 Score=37.37 Aligned_cols=43 Identities=12% Similarity=-0.014 Sum_probs=34.2
Q ss_pred ceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+|+||++|+|..++++.. .++...++..+.+++..+|....-+
T Consensus 106 ~~lv~e~~~g~~L~~~~~---~~~~~~~~~~i~~~l~~lh~~gi~H 148 (198)
T cd05144 106 HAVVMEYIDGVELYRVRV---LEDPEEVLDEILEEIVKAYKHGIIH 148 (198)
T ss_pred ceEEEEEeCCcchhhccc---cccHHHHHHHHHHHHHHHHHCCCCc
Confidence 389999999988876532 2567789999999999999975444
No 180
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=72.68 E-value=10 Score=41.79 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||++|.|..|.+.. ..++++....++.++-+.|+.||...+
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY 123 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 679999999998877664 368999999999999999999998754
No 181
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=72.65 E-value=16 Score=37.83 Aligned_cols=48 Identities=13% Similarity=-0.083 Sum_probs=40.0
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|++|++|+|..+.+... .+++.+...++.+|.+.|+.||..-+.+.
T Consensus 73 ~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 125 (256)
T cd08221 73 TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHR 125 (256)
T ss_pred eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 5899999999987776553 47899999999999999999998765443
No 182
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=72.57 E-value=14 Score=38.41 Aligned_cols=48 Identities=8% Similarity=-0.062 Sum_probs=39.9
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+|.|..+.+... .+++.....++.++.+.|+.||.....+.
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 119 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHR 119 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 3699999999877776553 58999999999999999999998765443
No 183
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=72.41 E-value=15 Score=39.44 Aligned_cols=47 Identities=13% Similarity=-0.032 Sum_probs=38.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||++|+|...+.+.. .++.++...++.++.+.|+.||.....+
T Consensus 77 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 126 (288)
T cd07871 77 CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILH 126 (288)
T ss_pred eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 6899999999955544433 4789999999999999999999976544
No 184
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=72.39 E-value=10 Score=41.45 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=21.3
Q ss_pred ceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhccc
Q 002526 673 PYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
.|+||++++=..+.. =|+.||+||+.+|+-
T Consensus 83 s~lime~idf~~lr~------------~~a~lG~qlAdmHl~ 112 (313)
T KOG3021|consen 83 SSLIMEHIDFQGLRS------------DAAKLGSQLADMHLK 112 (313)
T ss_pred eeeeeehhhcccchh------------HHHHHHHHHHHHhhh
Confidence 589999886433221 267899999999953
No 185
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=72.38 E-value=12 Score=40.92 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=22.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 691 ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 691 ~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
.|+.++...++.++.+-|..||...+
T Consensus 170 ~l~~~~~~~~~~qi~~aL~~LH~~~i 195 (338)
T cd05102 170 PLTMEDLICYSFQVARGMEFLASRKC 195 (338)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 37888999999999999999998754
No 186
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=72.29 E-value=10 Score=42.67 Aligned_cols=46 Identities=11% Similarity=0.010 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
..||||++|+|-.+.++.. .++++....++.++-..|..||...+-
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~iv 123 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFI 123 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 7899999999977766643 578889999999999999999997543
No 187
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=72.12 E-value=14 Score=37.71 Aligned_cols=50 Identities=18% Similarity=0.104 Sum_probs=41.8
Q ss_pred CceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-+|+||++|+|..+.+.. ..+++.....++.++.+.|+.||.....+.+.
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl 129 (258)
T cd08215 73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDI 129 (258)
T ss_pred EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccC
Confidence 578999999998776654 45889999999999999999999987665544
No 188
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=72.09 E-value=15 Score=39.01 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=37.3
Q ss_pred ceEEEeecCCCchhHHhh--------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD--------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~--------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.|+||.+|+|. +.+... .++++....++.++.+.|..||...+.+.
T Consensus 81 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~ 134 (295)
T cd07837 81 LYLVFEYLDSD-LKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHR 134 (295)
T ss_pred EEEEeeccCcC-HHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 69999999995 444432 37899999999999999999998865444
No 189
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=71.99 E-value=19 Score=38.82 Aligned_cols=48 Identities=21% Similarity=0.162 Sum_probs=38.5
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
..|+||.+|.|. +.++. ..+++.+...++.++.+.|..||...+.+.+
T Consensus 82 ~~~lv~e~~~~~-l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 133 (309)
T cd07845 82 SIFLVMEYCEQD-LASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRD 133 (309)
T ss_pred eEEEEEecCCCC-HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 469999999984 44333 3589999999999999999999998765543
No 190
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=71.70 E-value=14 Score=38.67 Aligned_cols=47 Identities=11% Similarity=0.089 Sum_probs=40.8
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||++++|..+.+... .++++....++.++...+..||...+-+
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 130 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVH 130 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5799999999999988763 5889999999999999999999886544
No 191
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=71.68 E-value=19 Score=37.98 Aligned_cols=47 Identities=11% Similarity=-0.050 Sum_probs=40.4
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..++.... .+++.....+|.++.+-|+.||....-+
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 128 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVH 128 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeEC
Confidence 6799999999988887754 4889999999999999999999876433
No 192
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=71.68 E-value=19 Score=37.37 Aligned_cols=46 Identities=13% Similarity=0.080 Sum_probs=38.5
Q ss_pred ceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+|+||++|+|..+.+... .+++.....++.++-+.+..||....-+
T Consensus 73 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H 123 (254)
T cd05083 73 LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVH 123 (254)
T ss_pred cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 699999999977776643 4788899999999999999999876544
No 193
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=71.65 E-value=13 Score=41.89 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=39.4
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
..||||++|+|..+.+.. ..+++.....++.++...|..||...+-
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~giv 123 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFI 123 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 689999999998887765 3588889999999999999999988653
No 194
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=71.59 E-value=19 Score=38.36 Aligned_cols=48 Identities=10% Similarity=-0.109 Sum_probs=39.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|.|..+..+.. .+++.....++.++.+.|+.||.....+.
T Consensus 77 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 127 (291)
T cd07870 77 TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHR 127 (291)
T ss_pred eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 7899999998876665543 57888999999999999999998865443
No 195
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=71.50 E-value=16 Score=37.66 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||+++.|..+.+.. ..++.+....++..+.+.+..||.--..+
T Consensus 66 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 116 (251)
T cd05041 66 PIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIH 116 (251)
T ss_pred CeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeh
Confidence 579999999998877654 35788999999999999999999775433
No 196
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=71.44 E-value=15 Score=39.01 Aligned_cols=48 Identities=15% Similarity=0.083 Sum_probs=40.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.||||++|+|..+..+.. .++++....++.++.+.|..||....-+.
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 124 (287)
T cd07848 74 KLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHR 124 (287)
T ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5799999999987776643 68999999999999999999998765443
No 197
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=71.19 E-value=17 Score=39.06 Aligned_cols=48 Identities=13% Similarity=-0.050 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+||.+|+|...+.+.. .++++....++.++.+.|..||...+.+.
T Consensus 78 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~ 128 (301)
T cd07873 78 SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHR 128 (301)
T ss_pred eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 6899999999865554433 58899999999999999999999765443
No 198
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=71.08 E-value=16 Score=37.79 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=39.7
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
..|+||++|.|..+.+... .+++.....++.++.+.|..||...+...+
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~ 126 (256)
T cd08218 73 NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRD 126 (256)
T ss_pred eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 6899999999977765442 478889999999999999999987655543
No 199
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=71.02 E-value=14 Score=38.63 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=40.7
Q ss_pred CCceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..+|++|.+++|..+.++.. .+++.....++.++.+.|+.||..-+.+
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 129 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMH 129 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 38999999999998888653 4788899999999999999999875444
No 200
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=70.84 E-value=16 Score=38.42 Aligned_cols=47 Identities=11% Similarity=0.067 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh-----------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||.+++|..+.+... .|++.+...++.++-..++.||...+.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h 145 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVH 145 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 5799999999988887653 4788899999999999999999876544
No 201
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=70.82 E-value=13 Score=41.81 Aligned_cols=46 Identities=15% Similarity=0.115 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
..||||++|+|..+.+.. ..++++....++.++...|..||...+-
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~giv 123 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFI 123 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 679999999998877664 3688889999999999999999987543
No 202
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=70.66 E-value=12 Score=38.92 Aligned_cols=50 Identities=16% Similarity=-0.020 Sum_probs=42.4
Q ss_pred CCceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
...|+||.+|+|..+.+... .|+++....++.++.+.|..||.....+.+
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~d 125 (258)
T cd05578 73 ENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRD 125 (258)
T ss_pred CeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 37899999999998887764 688999999999999999999987655443
No 203
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=70.51 E-value=14 Score=40.54 Aligned_cols=47 Identities=15% Similarity=0.044 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|.|..+.... ..++++....++.++.+.|..||...+-+
T Consensus 70 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH 119 (323)
T cd05575 70 KLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIY 119 (323)
T ss_pred EEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 569999999998776543 26889999999999999999999875433
No 204
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=70.17 E-value=2.8 Score=45.01 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=26.3
Q ss_pred CceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcc
Q 002526 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGK 878 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd 878 (912)
.-++|+||.|+||++.+ +. ...||||+-+.++.
T Consensus 161 ~GI~HrDlkp~NILv~~-----------------------------~~----~v~LIDfg~~~~~~ 193 (239)
T PRK01723 161 AGVYHADLNAHNILLDP-----------------------------DG----KFWLIDFDRGELRT 193 (239)
T ss_pred CCCCCCCCCchhEEEcC-----------------------------CC----CEEEEECCCcccCC
Confidence 44899999999999966 11 36799999888874
No 205
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=70.09 E-value=16 Score=40.34 Aligned_cols=42 Identities=12% Similarity=0.018 Sum_probs=37.3
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
..||||++|.|..|.+... .+++.....++.++.+.|..||.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~ 121 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 121 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999888754 57888889999999999999995
No 206
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=69.88 E-value=15 Score=40.73 Aligned_cols=48 Identities=13% Similarity=0.069 Sum_probs=40.3
Q ss_pred CCceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..+||||.+|.|.....+...|+.+....++.++.+.|..||...+.+
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H 141 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIH 141 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 368999999999666555557999999999999999999999976544
No 207
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=69.65 E-value=16 Score=42.21 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=22.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 691 ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 691 ~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
.|++.+...++.++.+-|..||...+
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~i 258 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNC 258 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 37788889999999999999998754
No 208
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=69.56 E-value=38 Score=37.86 Aligned_cols=120 Identities=11% Similarity=0.037 Sum_probs=71.8
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCC-CCCCCccccccCCCCCCCCCcccccccCCCCCc
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCP-PFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPA 750 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (912)
-||++|+++.|..-.+ ..+|+.|+.||..... +..... + ......+.
T Consensus 80 ~~y~L~~w~~~~~~~~--------------~~~~~~LA~lH~as~~f~~~~~~------------~------~~~~~~~~ 127 (313)
T TIGR02905 80 VSYYLFKAPEFNERRG--------------VDLGRELATFHKRGRQYPRPIWK------------K------SRIGQWKE 127 (313)
T ss_pred EEEEEEeCCCcccchh--------------HHHHHHHHHHHHhcCCCCCCccc------------c------ccccccHH
Confidence 7899999987765222 1899999999998653 111100 0 00112456
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhcCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCC--CCCCCCCceEeccccCCcee
Q 002526 751 EWEIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGL--NKVCKPCSWIHSDIMDDNVY 826 (912)
Q Consensus 751 ~W~~f~~~l~~~~~~~~~~~~~wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~--~~~~~~~~~iH~d~m~~ni~ 826 (912)
.|+..++.|.+.|+-+..+. . -++--.-.++.+|.|+-. +..-+..+++-+-. .......++.|+|+-..|++
T Consensus 128 ~~~k~~~el~~~~~~~~~~~-~-~s~Fd~~fl~~~d~~~~~-a~~ai~~l~~s~y~~~~~~~~~~~lCH~d~~~hn~l 202 (313)
T TIGR02905 128 LWAKRLDQLEDWWQSLLAQG-P-QTLFDEQFLETFPYYLGL-TENAIQYAADTELDDEPGLADSGTICHERFGETTWL 202 (313)
T ss_pred HHHHHHHHHHHHHHHHHhcC-C-CChHHHHHHHHhHHHHHH-HHHHHHHHHHccchhhhhccccCccccCccCccccc
Confidence 67777777776665554332 1 125666788888888853 33344444320111 11234779999999999976
No 209
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=69.35 E-value=28 Score=36.26 Aligned_cols=46 Identities=13% Similarity=0.045 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHh---------hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---------DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---------~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
=+|+||.+++|..+.... ..+++.....++.++.+.|..||.-..-
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~ 135 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFI 135 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 489999999998887664 2588999999999999999999987543
No 210
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=69.29 E-value=14 Score=40.62 Aligned_cols=47 Identities=11% Similarity=-0.012 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..+..... .++++....++.+|.+.|..||...+-+
T Consensus 69 ~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (323)
T cd05595 69 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 118 (323)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 6899999999988765543 5899999999999999999999976433
No 211
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=69.27 E-value=2.6 Score=47.71 Aligned_cols=20 Identities=15% Similarity=0.341 Sum_probs=17.1
Q ss_pred CCCCceEeccccCCceeeec
Q 002526 810 CKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~ 829 (912)
|-.-.+||+||+|+||++.+
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred HHhCCeecccCCcceEEECC
Confidence 45667999999999999965
No 212
>PLN00212 glutelin; Provisional
Probab=69.17 E-value=19 Score=43.32 Aligned_cols=73 Identities=12% Similarity=0.060 Sum_probs=53.2
Q ss_pred CCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEc
Q 002526 259 QRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQL 338 (912)
Q Consensus 259 ~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLe 338 (912)
+|+..+.|+.+++ +.+..++.|+=+.-+..+. + ...+...|+
T Consensus 357 ~gam~~PHwn~nA-~eI~yV~rG~g~vqvV~~~--------------g-----------------------~~vf~~~L~ 398 (493)
T PLN00212 357 QNALLSPFWNVNA-HSVVYITQGRARVQVVSNN--------------G-----------------------KTVFNGVLR 398 (493)
T ss_pred CCcccCCeecCCC-CEEEEEeecceEEEEEcCC--------------C-----------------------CEEEEEEEc
Confidence 4777888999986 4678888887665554321 0 134778999
Q ss_pred CCCEEEeCCCCceeeEeCCCcEEEeecccCC
Q 002526 339 PGETIVVPSGWWHCILNLETTIAVTQNFVDS 369 (912)
Q Consensus 339 PGDvLFVPsGWWHqV~NLddSIAVn~NFv~~ 369 (912)
+||++.||.|+.|....-.+..-+..-..+.
T Consensus 399 ~GdvfVVPqg~~v~~~A~~egfe~v~F~tna 429 (493)
T PLN00212 399 PGQLLIIPQHYAVLKKAEREGCQYIAFKTNA 429 (493)
T ss_pred CCCEEEECCCCeEEEeecCCceEEEEeecCC
Confidence 9999999999999988877666665544444
No 213
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=68.96 E-value=16 Score=40.15 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=38.2
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||.+|.|..+.... ..++++....++.++.+.|..||..-.
T Consensus 70 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi 117 (325)
T cd05604 70 KLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI 117 (325)
T ss_pred EEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 679999999997765543 268899999999999999999998754
No 214
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=68.89 E-value=17 Score=38.33 Aligned_cols=47 Identities=9% Similarity=0.014 Sum_probs=38.2
Q ss_pred CceEEEeecCCCchhHHhhc-------------CCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDA-------------LSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~-------------l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||.+|.|..|.+.... ++......++.++.+.|+.||....-+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH 142 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVH 142 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 57999999999888876543 456678889999999999999876544
No 215
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=68.89 E-value=7.4 Score=38.27 Aligned_cols=32 Identities=16% Similarity=-0.016 Sum_probs=27.1
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCCcEEEee
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLETTIAVTQ 364 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~ 364 (912)
-+..++|||++|+|++=.|...|.+++..|..
T Consensus 75 ~~~~L~aGD~i~~~~~~~H~~~N~e~~~~l~v 106 (125)
T PRK13290 75 EVHPIRPGTMYALDKHDRHYLRAGEDMRLVCV 106 (125)
T ss_pred EEEEeCCCeEEEECCCCcEEEEcCCCEEEEEE
Confidence 45779999999999999999999977665554
No 216
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=68.84 E-value=16 Score=40.75 Aligned_cols=47 Identities=13% Similarity=0.080 Sum_probs=41.1
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|.|.....+...++.+....++.++.+.|..||...+-+
T Consensus 100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH 146 (359)
T cd07876 100 DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 146 (359)
T ss_pred eeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 57999999999877777778999999999999999999999976543
No 217
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=68.63 E-value=21 Score=37.70 Aligned_cols=49 Identities=12% Similarity=-0.043 Sum_probs=38.4
Q ss_pred CceEEEeecCCCchhHHh-----hcCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.|+||.+|+|.....+. ..+++.+...++.++.+.|..||...+.+.+
T Consensus 73 ~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 126 (285)
T cd07861 73 RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRD 126 (285)
T ss_pred eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 579999999984433332 3588999999999999999999998665543
No 218
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=68.57 E-value=12 Score=38.10 Aligned_cols=15 Identities=33% Similarity=0.640 Sum_probs=14.2
Q ss_pred eEeccccCCceeeec
Q 002526 815 WIHSDIMDDNVYMEP 829 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~ 829 (912)
++|+||.|+||++..
T Consensus 122 ~~hrd~kp~nil~~~ 136 (384)
T COG0515 122 IIHRDIKPENILLDR 136 (384)
T ss_pred eeccCCCHHHeeecC
Confidence 899999999999976
No 219
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=68.52 E-value=21 Score=36.95 Aligned_cols=49 Identities=22% Similarity=0.203 Sum_probs=41.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.|+|+++++|..+.++.. .++++....++.++...|..||...+.+..
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~d 124 (264)
T cd06626 73 KVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRD 124 (264)
T ss_pred EEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 5799999999999998864 488999999999999999999998655443
No 220
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=68.47 E-value=23 Score=37.39 Aligned_cols=45 Identities=13% Similarity=0.198 Sum_probs=37.7
Q ss_pred CceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-+|++|++++|..+.+... .|+++....++.++.+.+..||....
T Consensus 70 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i 133 (270)
T cd05047 70 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 133 (270)
T ss_pred CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 5799999999877766542 48899999999999999999998644
No 221
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=68.43 E-value=18 Score=40.30 Aligned_cols=47 Identities=15% Similarity=0.094 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|.|.....+...++.+....++.++.+.|..||...+-+
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 149 (364)
T cd07875 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149 (364)
T ss_pred eEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 57999999999777777778999999999999999999999875443
No 222
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=68.32 E-value=17 Score=39.91 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-.||||++|+|..+.+... .++++....++.++.+.|..||..-+
T Consensus 70 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~gi 117 (325)
T cd05602 70 KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 117 (325)
T ss_pred eEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4799999999988877654 57888999999999999999998754
No 223
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=67.91 E-value=21 Score=38.10 Aligned_cols=47 Identities=11% Similarity=0.044 Sum_probs=40.3
Q ss_pred CceEEEeecCCCchhHHhh----------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||++++|..+.+... .|++.....++.++...|..||.....+
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H 143 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVH 143 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 5799999999988877653 3899999999999999999999876544
No 224
>PF02041 Auxin_BP: Auxin binding protein; InterPro: IPR000526 Auxin binding protein is located in the lumen of the endoplasmic reticulum (ER). The primary structure contains an N-terminal hydrophobic leader sequence of 30-40 amino acids, which could represent a signal for translocation of the protein to the ER [, ]. The mature protein comprises around 165 residues, and contains a number of potential N-glycosylation sites. In vitro transport studies have demonstrated co-translational glycosylation []. Retention within the lumen of the ER correlates with an additional signal located at the C terminus, represented by the sequence Lys-Asp-Glu-Leu, known to be responsible for preventing secretion of proteins from the lumen of the ER in eukaryotic cells [, ].; GO: 0004872 receptor activity, 0005788 endoplasmic reticulum lumen; PDB: 1LR5_D 1LRH_D.
Probab=67.59 E-value=17 Score=37.16 Aligned_cols=71 Identities=23% Similarity=0.272 Sum_probs=39.8
Q ss_pred ceEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCC
Q 002526 252 RWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDK 331 (912)
Q Consensus 252 rwL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~ 331 (912)
.|+--=.+|+.||.|.+.++- ..+++.|+=.-.|...+ .+|| .+
T Consensus 46 VwlQTfAPG~~TPiHRHsCEE--VFvVLkG~GTl~l~~~~-----------------------------~~~p-----G~ 89 (167)
T PF02041_consen 46 VWLQTFAPGSATPIHRHSCEE--VFVVLKGSGTLYLASSH-----------------------------EKYP-----GK 89 (167)
T ss_dssp EEEEEE-TT-B--EEEESS-E--EEEEEE--EEEEE--SS-----------------------------SSS-------S
T ss_pred EEeeeecCCCCCCCccccccE--EEEEEecceEEEEeccc-----------------------------ccCC-----CC
Confidence 354444579999999998864 88999998766655111 1233 36
Q ss_pred CEEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 332 PIECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 332 ~~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
+.+....|+++++||.+--|||.|.++
T Consensus 90 pqef~~~pnSTf~IPvn~~HQv~NT~e 116 (167)
T PF02041_consen 90 PQEFPIFPNSTFHIPVNDAHQVWNTNE 116 (167)
T ss_dssp -EEEEE-TTEEEEE-TT--EEEE---S
T ss_pred ceEEEecCCCeEEeCCCCcceeecCCC
Confidence 888999999999999999999999873
No 225
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=67.55 E-value=12 Score=41.03 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=40.3
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|+|..+.+.. ..|+++....++.++.+.|..||...+-+
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H 125 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVH 125 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 689999999998887765 36899999999999999999999876543
No 226
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=67.33 E-value=21 Score=37.39 Aligned_cols=48 Identities=17% Similarity=0.152 Sum_probs=39.3
Q ss_pred CceEEEeecCCCchhHHhh----cC--CHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----AL--SGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l--~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||.+++|..+.+... .+ ++.....++.++.+.|+.||...+.+.
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~ 132 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHR 132 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 6899999999988887543 34 677888999999999999998765443
No 227
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=67.23 E-value=23 Score=37.63 Aligned_cols=48 Identities=15% Similarity=0.003 Sum_probs=40.7
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
..|+||++|+|..++.. ..+++.....++.++...|..||...+...+
T Consensus 73 ~~~lv~e~~~~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 120 (279)
T cd06619 73 RISICTEFMDGGSLDVY-RKIPEHVLGRIAVAVVKGLTYLWSLKILHRD 120 (279)
T ss_pred EEEEEEecCCCCChHHh-hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence 67999999999888654 5688999999999999999999998765543
No 228
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=67.10 E-value=18 Score=40.44 Aligned_cols=45 Identities=20% Similarity=0.163 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||++|+|..+.+.. ..|++++...++.++...|..||...+
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 122 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF 122 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 579999999997776654 479999999999999999999998754
No 229
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=66.94 E-value=16 Score=40.91 Aligned_cols=46 Identities=11% Similarity=0.016 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||++|+|-.+.++.. .++++....++.++...|+.||...+-
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 123 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFI 123 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 6899999999988887653 578888888999999999999987543
No 230
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=66.93 E-value=23 Score=37.13 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++|.|..+.+.. ..+++..+..++.++.+.|+.||....-+
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIH 123 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 369999999987666543 36899999999999999999999876544
No 231
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=66.77 E-value=27 Score=36.16 Aligned_cols=48 Identities=8% Similarity=-0.090 Sum_probs=39.9
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+|.|..+.+... .++++....++.++.+.|..||...+-+.
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 121 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHR 121 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 5799999999877776542 47899999999999999999999865544
No 232
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=66.76 E-value=17 Score=39.91 Aligned_cols=47 Identities=15% Similarity=0.036 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..+.+... .++++....++.++.+.|..||...+-+
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 123 (323)
T cd05584 74 KLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIY 123 (323)
T ss_pred eEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 6899999999977766543 5788888999999999999999876433
No 233
>KOG0958 consensus DNA damage-responsive repressor GIS1/RPH1, jumonji superfamily [Replication, recombination and repair]
Probab=66.69 E-value=3.6 Score=50.21 Aligned_cols=116 Identities=19% Similarity=0.239 Sum_probs=81.8
Q ss_pred CCcceEEecCCCCCCccccCCCCCcccEEEEEeE-EEEEEeCCCCCCCccee----eecCCCC-------CccCCCCcch
Q 002526 249 PSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGR-KRWALYPPGRVPLGVTV----HVNEDDG-------DVNIETPSSL 316 (912)
Q Consensus 249 Pd~rwL~IGp~GSgTplH~Dp~~TsawnaqI~Gr-KrWiLfPP~~~p~gv~~----~~~~~~s-------~Vdv~sPdsl 316 (912)
+..+.||+|.=.+.-+||.+-++-+++|..--|. |.|..+||.+.....-+ ..+...+ ..-+.+|+-
T Consensus 172 vNt~yLyfGmwKttFaWHtEdmDLySINyLHFGaPK~WYaIP~eh~~rfekla~~~fp~~~~~C~aFLRHK~~LiSP~~- 250 (690)
T KOG0958|consen 172 VNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKQWYAIPPEHGDRFEKLASELFPDSSQGCPAFLRHKMTLISPSV- 250 (690)
T ss_pred cCccceeeeeeecccccccCCccceeeeeeecCCCcceeecCHHHHHHHHHHHHhhCCccccCCHHHHhhcccccCHHH-
Confidence 4457899999999999999888888888888886 88999999975321100 0000000 001123321
Q ss_pred hhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEeCCCcEEEeecccCCCCHH
Q 002526 317 EWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFE 373 (912)
Q Consensus 317 eW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~NFv~~~NL~ 373 (912)
+.++ .-+..++||++||.|.-=++=+|.--|++..+|=+.||..+.-+.
T Consensus 251 ---Lkqn-----GIpfn~ivqeagEFmITFPygyHaGFN~GfN~aES~nFat~Rwi~ 299 (690)
T KOG0958|consen 251 ---LKQN-----GIPFNRIVQEAGEFMITFPYGYHAGFNHGFNCAESTNFATPRWID 299 (690)
T ss_pred ---HHHc-----CCCcceeeecCCcEEEecCcccccccccchhhhhhhcccchhhhh
Confidence 1111 125678999999999999999999999999999999999876554
No 234
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=66.69 E-value=27 Score=37.08 Aligned_cols=48 Identities=19% Similarity=0.121 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh--------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||+++.|..+.+... .+++.....++.++.+.|+.||...+.+.
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 93 PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 5799999999987776543 47888999999999999999998865543
No 235
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=66.61 E-value=30 Score=36.13 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=40.3
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|++|.+++|..+.+... .++++....++.++.+.|+.||...+.+.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~ 126 (260)
T cd05067 74 PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHR 126 (260)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecc
Confidence 4799999999988877643 57899999999999999999998865443
No 236
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=66.57 E-value=23 Score=38.37 Aligned_cols=42 Identities=12% Similarity=0.014 Sum_probs=37.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
..||||.+++|..+.+... .+++.....++.++.+.|..||.
T Consensus 73 ~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 117 (308)
T cd06615 73 EISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE 117 (308)
T ss_pred EEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999988888764 58899999999999999999996
No 237
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=66.40 E-value=27 Score=36.77 Aligned_cols=48 Identities=19% Similarity=0.052 Sum_probs=41.1
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
=+||||++++|..+.+... .++++....++.++.+.+..||.-...+.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~ 122 (274)
T cd06609 73 KLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHR 122 (274)
T ss_pred eEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 3799999999988887766 58999999999999999999998755443
No 238
>PHA02882 putative serine/threonine kinase; Provisional
Probab=66.30 E-value=3.1 Score=44.95 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=15.0
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-+||+||.|+||++.+
T Consensus 145 ~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 145 HGISHGDIKPENIMVDG 161 (294)
T ss_pred CCeecCCCCHHHEEEcC
Confidence 35899999999999965
No 239
>TIGR01221 rmlC dTDP-4-dehydrorhamnose 3,5-epimerase. This enzyme participates in the biosynthesis of dTDP-L-rhamnose, often as a precursor to LPS O-antigen
Probab=66.22 E-value=32 Score=35.95 Aligned_cols=74 Identities=14% Similarity=0.092 Sum_probs=44.9
Q ss_pred EEecCCCCCCccccCCC-CCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCC
Q 002526 254 VIIGPQRSGASWHVDPA-LTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKP 332 (912)
Q Consensus 254 L~IGp~GSgTplH~Dp~-~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~ 332 (912)
+-+..+|+.-.+|+... ...=+..+++|+=.-+++.... .+|+ +. +-
T Consensus 48 ~S~S~~gvlRGlH~q~~~~q~Klv~c~~G~i~dV~VDlR~------------------~SpT-----------fG---~~ 95 (176)
T TIGR01221 48 HSKSYKGVLRGLHYQRPHPQGKLVRVLRGEVFDVAVDLRR------------------NSPT-----------FG---KW 95 (176)
T ss_pred EEEecCCEEEEEEECCCCCCceEEEEccCCEEEEEEECCC------------------CcCC-----------CC---eE
Confidence 34445577777888732 1123556666655444443321 2233 11 23
Q ss_pred EEEEEcC--CCEEEeCCCCceeeEeCCCc
Q 002526 333 IECTQLP--GETIVVPSGWWHCILNLETT 359 (912)
Q Consensus 333 ~E~vLeP--GDvLFVPsGWWHqV~NLddS 359 (912)
..+.|.+ +-+||||+|.+|-..++++.
T Consensus 96 ~~~~L~~~~~~~l~IP~G~aHGF~~L~d~ 124 (176)
T TIGR01221 96 VGVLLSAENKRQLWIPEGFAHGFVVLSDE 124 (176)
T ss_pred EEEEECCCCCCEEEeCCcceeEEEEcCCC
Confidence 4556666 66999999999999999876
No 240
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=65.72 E-value=33 Score=36.05 Aligned_cols=49 Identities=14% Similarity=0.060 Sum_probs=38.2
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-.|++|.+|.|...+.+. ..|++++...++.++.+.|+.||.....+.+
T Consensus 80 ~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~ 132 (287)
T cd07838 80 KLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRD 132 (287)
T ss_pred eeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 479999999985333232 1589999999999999999999998665543
No 241
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=65.66 E-value=3.9 Score=41.82 Aligned_cols=15 Identities=20% Similarity=0.497 Sum_probs=13.5
Q ss_pred ceEeccccCCceeee
Q 002526 814 SWIHSDIMDDNVYME 828 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~ 828 (912)
-++|+||+|+||++.
T Consensus 138 givHrDlkP~NIll~ 152 (190)
T cd05145 138 GLVHGDLSEYNILYH 152 (190)
T ss_pred CEecCCCChhhEEEE
Confidence 479999999999994
No 242
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=65.53 E-value=19 Score=37.96 Aligned_cols=46 Identities=11% Similarity=0.111 Sum_probs=39.7
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||++++|..+.+... .|++.+...++.++.+-|..||....-
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ii 129 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYV 129 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5799999999988887643 689999999999999999999987643
No 243
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=65.51 E-value=28 Score=37.12 Aligned_cols=47 Identities=13% Similarity=-0.070 Sum_probs=40.1
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++|.|..+.+... .|++++...++.++.+.|..||...+-+
T Consensus 71 ~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 71 KLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 5799999999988877653 5899999999999999999999875433
No 244
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=65.47 E-value=25 Score=37.21 Aligned_cols=48 Identities=10% Similarity=-0.074 Sum_probs=40.7
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+||.+++|..+.+... .+++++...++.++...|..||...+.+.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~ 119 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 6799999999988875532 58999999999999999999999876554
No 245
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=65.08 E-value=24 Score=37.07 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=39.2
Q ss_pred ceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.|+||.+|+|..+.+... .+++..+..++.++.+.|..||...+-+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H 130 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVH 130 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 479999999988888754 5899999999999999999999875443
No 246
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=64.93 E-value=25 Score=37.20 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=37.9
Q ss_pred CCceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
...|+||.+|.|....-+. ..+++++...++.++.+.|+.||..-+-+
T Consensus 80 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 131 (288)
T cd07863 80 TKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVH 131 (288)
T ss_pred ceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3689999999985444333 24899999999999999999999875433
No 247
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=64.60 E-value=23 Score=38.60 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=38.2
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|.|..++.+.. .|++.....++.++.+.+..||..-+-+
T Consensus 95 ~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H 144 (313)
T cd06633 95 TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH 144 (313)
T ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 6799999999965554432 5889999999999999999999875443
No 248
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=64.56 E-value=20 Score=37.08 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=38.6
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||++|+|.++.+... .|++.+...++.++...++.||..-+-+
T Consensus 74 ~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H 125 (257)
T cd08223 74 LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILH 125 (257)
T ss_pred EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 5799999999977765432 4889999999999999999999875433
No 249
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=64.29 E-value=5.3 Score=45.74 Aligned_cols=52 Identities=27% Similarity=0.363 Sum_probs=33.3
Q ss_pred cCCCCCceeeec-c------cEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeee
Q 002526 544 VGNGSNPVYLMA-D------CVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGI 603 (912)
Q Consensus 544 ~~~GsnpV~~v~-~------~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~ 603 (912)
+|.||==|...| + ..|||=|--...-- |--|..||.+|.- .+ -||.+-..|-
T Consensus 36 IGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQ---LrdEYr~YKlL~g--~~---GIP~vYYFGq 94 (449)
T KOG1165|consen 36 IGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQ---LRDEYRTYKLLGG--TE---GIPQVYYFGQ 94 (449)
T ss_pred cccCcceeeecccccccCceEEEEeccccCCcch---HHHHHHHHHHHcC--CC---CCCceeeecc
Confidence 567777777666 2 35788884433333 3479999999952 22 3788777765
No 250
>PHA02988 hypothetical protein; Provisional
Probab=64.29 E-value=26 Score=37.67 Aligned_cols=43 Identities=23% Similarity=0.184 Sum_probs=38.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhccc
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
-.||||.+|+|..|.++.. .++......+|..+...|..||..
T Consensus 96 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 141 (283)
T PHA02988 96 RLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY 141 (283)
T ss_pred ceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 4689999999998888864 688999999999999999999973
No 251
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=64.28 E-value=4.1 Score=40.77 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=0.0
Q ss_pred CCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCC
Q 002526 812 PCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLS 875 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~ 875 (912)
++.++|+||+|+||++.. ..+. |+|||.+.
T Consensus 133 ~~~ivH~Dl~p~Nili~~---------------------------------~~~~-liDfg~a~ 162 (187)
T cd05119 133 EAGLVHGDLSEYNILVDD---------------------------------GKVY-IIDVPQAV 162 (187)
T ss_pred ccCcCcCCCChhhEEEEC---------------------------------CcEE-EEECcccc
No 252
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=64.20 E-value=30 Score=36.07 Aligned_cols=44 Identities=5% Similarity=0.061 Sum_probs=38.0
Q ss_pred ceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 673 PYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
+|+||.++.|..+++... .++++....++.++...|+.||..-.
T Consensus 70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i 116 (257)
T cd05116 70 WMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116 (257)
T ss_pred cEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 489999999988877654 58899999999999999999998653
No 253
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=64.17 E-value=33 Score=36.13 Aligned_cols=46 Identities=9% Similarity=0.004 Sum_probs=37.7
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
=.|+||+++ |..+.+... .+++++...++.++.+.|..||..-.-+
T Consensus 73 ~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 122 (286)
T cd07832 73 GFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMH 122 (286)
T ss_pred eeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 369999999 777776543 4889999999999999999999875433
No 254
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=64.01 E-value=21 Score=39.04 Aligned_cols=45 Identities=13% Similarity=0.053 Sum_probs=39.2
Q ss_pred CceEEEeecCCCchhHHh-----hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||.+|.|..+.++. ..|++.....++.++.+.|+.||..-+
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 122 (327)
T cd08227 73 ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY 122 (327)
T ss_pred EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 579999999998888775 348999999999999999999998754
No 255
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=63.96 E-value=19 Score=39.36 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=37.8
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-.||||++|+|..+.... ..++++....++.++.+.|..||...+
T Consensus 70 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 117 (321)
T cd05603 70 KLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNI 117 (321)
T ss_pred EEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 579999999997775543 258899999999999999999998754
No 256
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=63.83 E-value=10 Score=39.89 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=42.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.|+||++|+|..+..+.. .+++++...++.+|.+.|..||...+.+.
T Consensus 74 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~ 124 (286)
T cd07847 74 KLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHR 124 (286)
T ss_pred EEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 5799999999998888764 68999999999999999999999766543
No 257
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=63.60 E-value=21 Score=40.38 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=23.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 691 ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 691 ~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.|++++...++.++.+-|..||...+-+
T Consensus 210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH 237 (375)
T cd05104 210 ALDTEDLLSFSYQVAKGMSFLASKNCIH 237 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4788899999999999999999876533
No 258
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=63.55 E-value=16 Score=38.50 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|.|.....+.. .+++.....++.++.+.|..||..-+.+.
T Consensus 72 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~ 123 (283)
T cd07830 72 ELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHR 123 (283)
T ss_pred cEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 7899999997765554543 57899999999999999999998765443
No 259
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=63.34 E-value=3.3 Score=47.46 Aligned_cols=38 Identities=34% Similarity=0.450 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhhhcceeeee
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFLLNSICVSY 889 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~~~~~~~~~ 889 (912)
+||+||+|.|||+-... -..|-|||=+.+ |.||+|-||
T Consensus 200 IIHRDIKPsNlLvNskG---------------------------------eVKicDFGVS~~----lvnS~a~tf 237 (364)
T KOG0581|consen 200 IIHRDIKPSNLLVNSKG---------------------------------EVKICDFGVSGI----LVNSIANTF 237 (364)
T ss_pred eeeccCCHHHeeeccCC---------------------------------CEEeccccccHH----hhhhhcccc
No 260
>PRK12274 serine/threonine protein kinase; Provisional
Probab=63.00 E-value=5 Score=43.23 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=25.4
Q ss_pred ceEeccc-cCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcch
Q 002526 814 SWIHSDI-MDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKC 879 (912)
Q Consensus 814 ~~iH~d~-m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~ 879 (912)
-++|+|| .|+||++.+ + + -..|||||-+...++
T Consensus 111 GIvHrDL~kp~NILv~~-------------------------~----g----~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 111 GVAHNDLAKEANWLVQE-------------------------D----G----SPAVIDFQLAVRGNP 144 (218)
T ss_pred cCccCCCCCcceEEEcC-------------------------C----C----CEEEEECCCceecCC
Confidence 3799999 799999954 1 1 156999999987764
No 261
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=62.98 E-value=20 Score=38.32 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHh-----hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||.+|+|.++.+.. ..+++.....++.++.+.|..||...+-
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (285)
T cd05605 74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124 (285)
T ss_pred eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 479999999998887553 2588999999999999999999987643
No 262
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=62.89 E-value=23 Score=37.60 Aligned_cols=47 Identities=11% Similarity=-0.029 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHhh-------------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||.+|.|-++.+... .|++.++..++.++.+.|..||.....+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 5799999999977776653 3678899999999999999999875444
No 263
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=62.73 E-value=15 Score=41.40 Aligned_cols=46 Identities=11% Similarity=0.109 Sum_probs=40.0
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
..||||++|+|..+.++.. .++++....++.+|.+.|+.||...+-
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 164 (370)
T cd05596 117 YLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFI 164 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 6899999999988888765 488889999999999999999987543
No 264
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=62.72 E-value=20 Score=39.44 Aligned_cols=47 Identities=17% Similarity=0.093 Sum_probs=40.3
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|+|..+.+... .|+++....++.++.+.|..||...+-+
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH 124 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIH 124 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 6799999999988877653 6899999999999999999999975433
No 265
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=62.68 E-value=4.4 Score=43.99 Aligned_cols=17 Identities=12% Similarity=0.143 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
--++|+||+|.||++.+
T Consensus 154 ~gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 154 HGMVSGDPHKGNFIVSK 170 (232)
T ss_pred cCCccCCCChHHEEEeC
Confidence 35899999999999966
No 266
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=62.58 E-value=26 Score=36.96 Aligned_cols=48 Identities=13% Similarity=-0.008 Sum_probs=39.3
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.|+||.+|.|..+..+. ..++++....++.++.+.|..||...+.+.
T Consensus 73 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~ 123 (284)
T cd07839 73 KLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHR 123 (284)
T ss_pred ceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 579999999986555443 468999999999999999999998865443
No 267
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=62.53 E-value=26 Score=37.31 Aligned_cols=47 Identities=11% Similarity=-0.050 Sum_probs=37.8
Q ss_pred CCceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..+|+||.++ |..+.++.. .|+++++..++.++.+.|..||..-+-+
T Consensus 75 ~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 125 (298)
T cd07841 75 SNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH 125 (298)
T ss_pred CEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 3789999999 545555543 4889999999999999999999876433
No 268
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=62.26 E-value=5.5 Score=46.65 Aligned_cols=48 Identities=15% Similarity=0.301 Sum_probs=42.4
Q ss_pred CCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHHhhc
Q 002526 22 KIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKA 69 (912)
Q Consensus 22 ~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~ 69 (912)
-.||.|+++.|+++||..+|.+-+++|+.|-..+-|-.-|..+=+-.+
T Consensus 73 ~~LPpEl~lkvFS~LDtksl~r~a~~c~~~n~~AlD~~~~q~idL~t~ 120 (483)
T KOG4341|consen 73 RSLPPELLLKVFSMLDTKSLCRAAQCCTMWNKLALDGSCWQHIDLFTF 120 (483)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccccceeeehhcc
Confidence 359999999999999999999999999999999988888877665554
No 269
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=62.00 E-value=37 Score=35.80 Aligned_cols=47 Identities=11% Similarity=-0.064 Sum_probs=37.7
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+||||.++.| .+.+... .+++..+..++.++.+.|..||.....+.
T Consensus 72 ~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~ 123 (283)
T cd07835 72 KLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHR 123 (283)
T ss_pred eEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC
Confidence 78999999976 4554432 47899999999999999999998765443
No 270
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=61.61 E-value=5.2 Score=48.49 Aligned_cols=20 Identities=30% Similarity=0.491 Sum_probs=16.7
Q ss_pred CCCCceEeccccCCceeeec
Q 002526 810 CKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~ 829 (912)
+-.--+||+||+||||.++.
T Consensus 686 lh~~~ivhrdikdenvivd~ 705 (772)
T KOG1152|consen 686 LHDQGIVHRDIKDENVIVDS 705 (772)
T ss_pred ccccCceecccccccEEEec
Confidence 34556999999999999966
No 271
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=61.51 E-value=22 Score=41.21 Aligned_cols=43 Identities=23% Similarity=0.488 Sum_probs=40.0
Q ss_pred ceEEEeecCC-CchhHHhhc-CCHHHHHHHHHHHHHHHHhhcccC
Q 002526 673 PYIITKRCKG-KMFAQLRDA-LSGEDVLNLASFLGEQLRNLHLLP 715 (912)
Q Consensus 673 pYiv~~r~~G-~~~~~~~~~-l~~~d~~~la~~lg~~~~~lH~lp 715 (912)
=||||+.|.| ..|+.+... +|+.|...++.++-+.++.+|..-
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~g 155 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLG 155 (382)
T ss_pred EEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4999999996 999999998 999999999999999999999963
No 272
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=61.45 E-value=35 Score=37.33 Aligned_cols=47 Identities=11% Similarity=0.000 Sum_probs=38.1
Q ss_pred CceEEEeecCCCchhHHh--hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR--DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~--~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||.++.|....-+. ..++++....++.++.+.|+.||....-+
T Consensus 94 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H 142 (335)
T PTZ00024 94 FINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMH 142 (335)
T ss_pred cEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 789999999985444332 26899999999999999999999876543
No 273
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=61.29 E-value=39 Score=35.68 Aligned_cols=48 Identities=8% Similarity=-0.021 Sum_probs=37.4
Q ss_pred CCceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
...||||++|+|..|.+... .++......++.++.+.|..||.....+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 122 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLH 122 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 36899999999988776543 3445567889999999999999876543
No 274
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=61.12 E-value=29 Score=37.73 Aligned_cols=47 Identities=17% Similarity=0.189 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHh-------------------hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------------------DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------------------~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||.++.|..+.+.. ..|+..+...++.++-+.|..||...+-+
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H 157 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIH 157 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 579999999998777654 24888899999999999999999875433
No 275
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=60.93 E-value=13 Score=38.32 Aligned_cols=50 Identities=16% Similarity=0.045 Sum_probs=42.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
..|+||++++|..+.++.. .+++..+.+++.++.+.|+.||...+.+.+.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di 119 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119 (265)
T ss_pred EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCC
Confidence 6899999999988887754 5899999999999999999999887655443
No 276
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=60.55 E-value=23 Score=39.37 Aligned_cols=44 Identities=9% Similarity=-0.007 Sum_probs=35.9
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-.|+||.+|+|..+.+. ..+++.....++.++...|..||..-+
T Consensus 146 ~~~lv~e~~~~~~L~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i 189 (353)
T PLN00034 146 EIQVLLEFMDGGSLEGT-HIADEQFLADVARQILSGIAYLHRRHI 189 (353)
T ss_pred eEEEEEecCCCCccccc-ccCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 46899999999877653 356777888999999999999998753
No 277
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=60.44 E-value=32 Score=36.13 Aligned_cols=48 Identities=4% Similarity=-0.039 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHhh-------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
=.|+||++|+|.+|.+... .+++.....++.++...++.||.....+.
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 143 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHR 143 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 3799999999888877653 36778899999999999999998765443
No 278
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=60.43 E-value=28 Score=37.93 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=37.3
Q ss_pred CceEEEeecCCCchhHH---hhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQL---RDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~---~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+||||.+|.|...+.+ ...|++.+...++.++.+.|..||....-+
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H 148 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH 148 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 57999999999544333 235889999999999999999999875433
No 279
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=60.28 E-value=7.8 Score=44.89 Aligned_cols=19 Identities=16% Similarity=0.300 Sum_probs=15.8
Q ss_pred CceEeccccCCceeeeccc
Q 002526 813 CSWIHSDIMDDNVYMEPCC 831 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~~~ 831 (912)
--++|+||+||||+..-++
T Consensus 211 ~kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 211 LKLTHTDLKPENILFVSSE 229 (415)
T ss_pred cceeecCCChheEEEeccc
Confidence 4579999999999997743
No 280
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=59.97 E-value=24 Score=37.98 Aligned_cols=49 Identities=10% Similarity=-0.054 Sum_probs=41.5
Q ss_pred CCceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+.|++|++|.|..+.++.. .+++.....++.++.+.|..||...+.+.
T Consensus 72 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~ 125 (314)
T cd08216 72 SELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHR 125 (314)
T ss_pred CeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 37899999999988877653 58899999999999999999999876543
No 281
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=59.70 E-value=34 Score=35.88 Aligned_cols=47 Identities=15% Similarity=0.038 Sum_probs=38.5
Q ss_pred CceEEEeecCCCchhHHh-h---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-D---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+||||.++.| .+.++. . .+++++...++.++.+.|+.||..-..+.
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~ 124 (287)
T cd07840 74 SIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHR 124 (287)
T ss_pred cEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 78999999998 455443 2 58899999999999999999999865444
No 282
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=59.62 E-value=28 Score=37.06 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|+|..+.+... .++++....++.++.+.|..||.....+
T Consensus 67 ~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 118 (277)
T cd05607 67 HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY 118 (277)
T ss_pred eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 6799999999988865542 4788899999999999999999875433
No 283
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=59.54 E-value=5.1 Score=45.93 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=16.1
Q ss_pred CceEeccccCCceeeeccc
Q 002526 813 CSWIHSDIMDDNVYMEPCC 831 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~~~ 831 (912)
.-+.|+||+|.||||.|.+
T Consensus 144 ~~IcHRDIKPqNlLvD~~t 162 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDT 162 (364)
T ss_pred cCcccCCCChheEEEcCCC
Confidence 4567999999999999843
No 284
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=59.17 E-value=35 Score=36.29 Aligned_cols=46 Identities=17% Similarity=-0.038 Sum_probs=37.1
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||+++.| .+.+... .++++....++.++.+.|..||..-+-+
T Consensus 77 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H 126 (291)
T cd07844 77 TLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH 126 (291)
T ss_pred eEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 68999999998 4544332 5788999999999999999999875444
No 285
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=58.99 E-value=15 Score=41.39 Aligned_cols=54 Identities=24% Similarity=0.389 Sum_probs=37.9
Q ss_pred HHHHHHHhhc-CCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeecc
Q 002526 764 KNLVNRLTAW-GHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (912)
Q Consensus 764 ~~~~~~~~~w-g~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~ 830 (912)
..|.++|-+- -+|+|...+.|+--=+ ++-|..+|+ --.+||+|++|-|||....
T Consensus 174 s~C~ekLlkrik~piPE~ilGk~tva~----v~AL~YLKe---------KH~viHRDvKPSNILlDe~ 228 (391)
T KOG0983|consen 174 STCAEKLLKRIKGPIPERILGKMTVAI----VKALYYLKE---------KHGVIHRDVKPSNILLDER 228 (391)
T ss_pred HHHHHHHHHHhcCCchHHhhhhhHHHH----HHHHHHHHH---------hcceeecccCccceEEccC
Confidence 3444444332 3489999999986433 566666666 3468999999999999773
No 286
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=58.52 E-value=24 Score=39.97 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=23.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 691 ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 691 ~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.|+++....++.++.+.|..||...+-+
T Consensus 208 ~l~~~~~~~i~~qi~~aL~yLH~~giiH 235 (374)
T cd05106 208 PLDLDDLLRFSSQVAQGMDFLASKNCIH 235 (374)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 4788899999999999999999876533
No 287
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=58.41 E-value=26 Score=38.91 Aligned_cols=47 Identities=13% Similarity=0.086 Sum_probs=41.4
Q ss_pred CceEEEeecCCCchhHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||++|+|.....+...++.+....++.++.+.|..||...+-+
T Consensus 96 ~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH 142 (355)
T cd07874 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 142 (355)
T ss_pred eeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 57999999999877777778999999999999999999999875543
No 288
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=58.39 E-value=27 Score=38.29 Aligned_cols=47 Identities=13% Similarity=-0.002 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|.|..+..... .|++.....++.++.+.|..||...+-+
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVY 124 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 4799999999987765543 6899999999999999999999886544
No 289
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=58.01 E-value=21 Score=39.44 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=30.3
Q ss_pred CceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcchhh
Q 002526 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKCFL 881 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~~~ 881 (912)
.+..|+|+.++|++..+. + --.||||+=++.||+..
T Consensus 153 ~v~cH~Dl~~~N~l~t~~------------------------~---------~l~LIDWEyAg~~D~~~ 188 (269)
T COG0510 153 LVPCHNDLNPGNLLLTDK------------------------G---------GLFLIDWEYAGLNDPAF 188 (269)
T ss_pred eeeecCCCCccceEEcCC------------------------C---------cEEEEecccCCCccHHH
Confidence 899999999999999651 1 14799999999999964
No 290
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=58.00 E-value=32 Score=36.89 Aligned_cols=47 Identities=11% Similarity=-0.056 Sum_probs=40.3
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||+++.|..+.+... .|++.+...++.++...|..||...+-+
T Consensus 74 ~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH 125 (285)
T cd05630 74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVY 125 (285)
T ss_pred EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 7899999999988877653 4889999999999999999999876544
No 291
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=57.81 E-value=33 Score=37.35 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=37.2
Q ss_pred ceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.||||.+|.|...+.+.. .++++....++.++.+.|..||...+-+
T Consensus 79 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 126 (338)
T cd07859 79 IYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFH 126 (338)
T ss_pred EEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 699999998754443332 6999999999999999999999986544
No 292
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=57.59 E-value=50 Score=34.62 Aligned_cols=48 Identities=13% Similarity=0.024 Sum_probs=38.2
Q ss_pred CCceEEEeecCCCchhHHhhc--------CCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRDA--------LSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~~--------l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
...||||++|.|-.|.+.... ++++....++.++.+.+..||...+.+
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 123 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIH 123 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEec
Confidence 378999999999888776432 346677889999999999999986544
No 293
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=57.56 E-value=30 Score=37.06 Aligned_cols=47 Identities=15% Similarity=-0.028 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||.+|+|..+.+..- .++++....+|.++.+.|..||..-+-+
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH 125 (285)
T cd05632 74 ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVY 125 (285)
T ss_pred EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 5799999999988876542 5889999999999999999999876543
No 294
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=57.33 E-value=29 Score=38.18 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=38.6
Q ss_pred CCceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
...|+||.+|.|. +.+.. ..++++....++.++.+.|+.||...+.+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 130 (334)
T cd07855 81 KDVYVVMDLMESD-LHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIH 130 (334)
T ss_pred ceEEEEEehhhhh-HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4779999999884 44443 36899999999999999999999876544
No 295
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=57.27 E-value=19 Score=37.15 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=41.6
Q ss_pred ceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
+|+||++++|..+.+... .+++.....++.++.+.++.||.....+...
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 128 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDI 128 (258)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 699999999988877754 4889999999999999999999987666544
No 296
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=57.27 E-value=35 Score=40.14 Aligned_cols=45 Identities=13% Similarity=-0.012 Sum_probs=37.7
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||.+|+|..|.+... .|++.+...++.++.+.|..||...+
T Consensus 139 ~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i 190 (478)
T PTZ00267 139 KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM 190 (478)
T ss_pred EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 6899999999988865432 37888999999999999999998753
No 297
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=56.44 E-value=8.2 Score=41.26 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=16.0
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
.--+|||||+.-||++.+
T Consensus 131 ~ndiiHGDLTTSNill~~ 148 (229)
T KOG3087|consen 131 DNDIIHGDLTTSNILLRS 148 (229)
T ss_pred hCCeecccccccceEEec
Confidence 445899999999999988
No 298
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=56.25 E-value=33 Score=34.38 Aligned_cols=50 Identities=20% Similarity=0.169 Sum_probs=42.5
Q ss_pred CceEEEeecCCCchhHHhhc---CCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRDA---LSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~~---l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
..|++|++++|..+.++... ++...+..++..+.+.++.||...+.+.+.
T Consensus 61 ~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i 113 (244)
T smart00220 61 KLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDL 113 (244)
T ss_pred EEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCc
Confidence 68999999999888877654 789999999999999999999986665443
No 299
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=56.14 E-value=7.3 Score=39.84 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 144 ~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 144 HGIIHGDLSEFNILVDD 160 (198)
T ss_pred CCCCcCCCCcccEEEcC
Confidence 45999999999999954
No 300
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=56.08 E-value=18 Score=38.30 Aligned_cols=48 Identities=13% Similarity=0.138 Sum_probs=40.4
Q ss_pred CceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+|+|..+.++. ..+++.....++.++.+.|..||.....+.
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 148 (286)
T cd06638 94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHR 148 (286)
T ss_pred eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 689999999999988753 357788899999999999999998765443
No 301
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=56.08 E-value=41 Score=35.81 Aligned_cols=45 Identities=11% Similarity=0.022 Sum_probs=38.0
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-+|+||.+++|..+.+... .+++.....++.++.+.|+.||....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 130 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM 130 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3689999999877776653 67899999999999999999998654
No 302
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=55.37 E-value=17 Score=38.05 Aligned_cols=49 Identities=14% Similarity=-0.035 Sum_probs=41.3
Q ss_pred CCceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
...|+||.+++|..+.+.. ..+++....+++.+|...|+.||.....+.
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 130 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHR 130 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 3789999999998887764 367889999999999999999998865543
No 303
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=55.15 E-value=48 Score=35.61 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=38.8
Q ss_pred CceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||++++|..+.+... .|++.....++.++.+.+..||....-+
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 142 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIH 142 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5899999999877776653 4788899999999999999999875433
No 304
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=55.06 E-value=20 Score=37.48 Aligned_cols=48 Identities=13% Similarity=-0.106 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||++|.|-.+.+... .+++..+..++.++...|+.||.....+.
T Consensus 73 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~ 124 (258)
T cd05078 73 ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHG 124 (258)
T ss_pred CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5799999999988877653 48999999999999999999999875543
No 305
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=54.91 E-value=21 Score=36.96 Aligned_cols=48 Identities=15% Similarity=-0.064 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.+|+||++|+|..+.+... .++...+..++.++.+.|+.||...+.+.
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 125 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHG 125 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecc
Confidence 5799999999988887754 58899999999999999999998765443
No 306
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=54.60 E-value=5.5 Score=47.43 Aligned_cols=20 Identities=30% Similarity=0.647 Sum_probs=17.6
Q ss_pred CCCceEeccccCCceeeecc
Q 002526 811 KPCSWIHSDIMDDNVYMEPC 830 (912)
Q Consensus 811 ~~~~~iH~d~m~~ni~~~~~ 830 (912)
..|.+|||||+|+|||+.-.
T Consensus 205 ~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 205 RECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HhcCccccCCCcceeeeecc
Confidence 47999999999999999653
No 307
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=54.50 E-value=24 Score=37.17 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=39.8
Q ss_pred ceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
+|+||.+|+|..+.+... .++++....++.++.+.|+.||....-+.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~ 126 (262)
T cd05071 75 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 126 (262)
T ss_pred cEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 589999999988877764 37889999999999999999999865443
No 308
>KOG4408 consensus Putative Mg2+ and Co2+ transporter CorD [Inorganic ion transport and metabolism]
Probab=54.40 E-value=1.9 Score=48.71 Aligned_cols=49 Identities=29% Similarity=0.392 Sum_probs=44.8
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccChhhHHHHHHhhc
Q 002526 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKA 69 (912)
Q Consensus 21 l~~LPDElLl~ILs~Ld~~dL~~La~vsR~fY~~~~ddeLWr~l~l~~~ 69 (912)
+..+|+.+++.+++++.++++.+.|+|+|++-+..+++.+|...|-+.+
T Consensus 8 le~~~~~~l~~vls~~~~~~~~~~a~vs~rLk~~~s~~~lw~r~c~k~l 56 (386)
T KOG4408|consen 8 LEWLPRDPLHLVLSFLLYRDLINCAYVSRRLKELGSHLPLWNRPCKKYL 56 (386)
T ss_pred hhhcccccceeeecccchhhhhcceeechHHhhhhhccccccccccccc
Confidence 4558889999999999999999999999999999999999999996655
No 309
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=54.00 E-value=40 Score=37.05 Aligned_cols=47 Identities=13% Similarity=0.212 Sum_probs=38.7
Q ss_pred ceEEEeecCCCchhHHhh-cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD-ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~-~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.|+||.+|.|.....+.. .|+++....++.++.+.|+.||...+.+-
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~ 130 (336)
T cd07849 83 VYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHR 130 (336)
T ss_pred EEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 599999999865555543 68999999999999999999999876443
No 310
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=53.73 E-value=55 Score=36.09 Aligned_cols=46 Identities=13% Similarity=0.028 Sum_probs=37.5
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++|.| .+.++.. .++++....++.++.+.|+.||..-.-+
T Consensus 84 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH 131 (328)
T cd07856 84 DIYFVTELLGT-DLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVH 131 (328)
T ss_pred cEEEEeehhcc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 68999999966 5665543 6788889999999999999999986544
No 311
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=53.65 E-value=23 Score=36.88 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=42.1
Q ss_pred CceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-+|+||++|+|..+.++. ..+++.....++.+|.+.+..||...+.+.+.
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l 132 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDL 132 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCC
Confidence 479999999998888754 35889999999999999999999987665543
No 312
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=53.63 E-value=18 Score=37.25 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=24.5
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCCcEE
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLETTIA 361 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLddSIA 361 (912)
-+..++|||.+|+|++=.|...|.++.-+
T Consensus 146 ~~~~l~~Gd~~~~~~~~~H~~~n~~~~~~ 174 (185)
T PRK09943 146 QDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 (185)
T ss_pred EEEEecCCCEEEEcCCCCeeeeCCCCCCe
Confidence 45679999999999999999999875433
No 313
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=53.28 E-value=20 Score=37.26 Aligned_cols=49 Identities=16% Similarity=0.109 Sum_probs=40.6
Q ss_pred CceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
=.||||++|+|..+.++. ..|+++....++.++.+.|..||....-+.+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~ 138 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRD 138 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 379999999998877663 3688999999999999999999988654443
No 314
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=52.78 E-value=50 Score=36.27 Aligned_cols=46 Identities=13% Similarity=0.181 Sum_probs=37.9
Q ss_pred ceEEEeecCCCchhHHhh-------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD-------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~-------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.||||.+++|..+.+... .++..++..++.++.+-|..||...+-+
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH 157 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIH 157 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 689999999977777643 3778889999999999999999876543
No 315
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=52.76 E-value=62 Score=33.98 Aligned_cols=47 Identities=11% Similarity=-0.021 Sum_probs=36.8
Q ss_pred CceEEEeecCCCchhHHhh--------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||++|+|-.+.+... .+++.....++.++.+.|+.||....-+
T Consensus 69 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 123 (269)
T cd05087 69 PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIH 123 (269)
T ss_pred CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 5699999999887776643 2456677889999999999999775443
No 316
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=52.58 E-value=57 Score=37.75 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=24.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 690 DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 690 ~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..|+..+...++.++.+-|..||...+.+-
T Consensus 234 ~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr 263 (401)
T cd05107 234 PALSYMDLVGFSYQVANGMEFLASKNCVHR 263 (401)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCcCcc
Confidence 357788889999999999999998865443
No 317
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=52.47 E-value=61 Score=34.42 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh------------------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD------------------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||+++.|..+.+... .|+++....++.++-+.++.||.....+.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~ 146 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHR 146 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 4799999999988877653 47889999999999999999998765443
No 318
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=52.36 E-value=17 Score=39.58 Aligned_cols=44 Identities=25% Similarity=0.434 Sum_probs=32.5
Q ss_pred cCCCCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeec
Q 002526 773 WGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 773 wg~~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~ 829 (912)
-|.-||...|.+|.-=+ +.-+.++++ .-++||+|++|.|||+..
T Consensus 141 ~g~~ipE~vlGkIa~Sv----v~al~~L~~---------kL~vIHRDvKPsNiLIn~ 184 (282)
T KOG0984|consen 141 KGGTIPEDVLGKIAVSV----VHALEFLHS---------KLSVIHRDVKPSNILINY 184 (282)
T ss_pred cCCcCchHHhhHhHHHH----HHHHHHHHH---------HhhhhhccCCcceEEEcc
Confidence 36689999999987543 344444433 457899999999999955
No 319
>smart00090 RIO RIO-like kinase.
Probab=52.33 E-value=8.9 Score=41.19 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCC-Ccchhhh
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLS-IGKCFLL 882 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~-~Gd~~~~ 882 (912)
++|+||.|+||++.. .-..|||||-+. .|.+..+
T Consensus 170 iiH~Dikp~NIli~~----------------------------------~~i~LiDFg~a~~~~~~~~~ 204 (237)
T smart00090 170 LVHGDLSEYNILVHD----------------------------------GKVVIIDVSQSVELDHPMAL 204 (237)
T ss_pred EEeCCCChhhEEEEC----------------------------------CCEEEEEChhhhccCCcchH
No 320
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=52.27 E-value=53 Score=35.16 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.||||.+|.|..+..+. ..+++.....++.++.+.|..||...+-..
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~ 132 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHR 132 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 579999999986655443 257899999999999999999998875443
No 321
>PF01050 MannoseP_isomer: Mannose-6-phosphate isomerase; InterPro: IPR001538 Mannose-6-phosphate isomerase or phosphomannose isomerase (5.3.1.8 from EC) (PMI) is the enzyme that catalyses the interconversion of mannose-6-phosphate and fructose-6-phosphate. In eukaryotes PMI is involved in the synthesis of GDP-mannose, a constituent of N- and O-linked glycans and GPI anchors and in prokaryotes it participates in a variety of pathways, including capsular polysaccharide biosynthesis and D-mannose metabolism. PMI's belong to the cupin superfamily whose functions range from isomerase and epimerase activities involved in the modification of cell wall carbohydrates in bacteria and plants, to non-enzymatic storage proteins in plant seeds, and transcription factors linked to congenital baldness in mammals []. Three classes of PMI have been defined []. The type II phosphomannose isomerases are bifunctional enzymes 5.3.1.8 from EC. This entry covers the isomerase region of the protein []. The guanosine diphospho-D-mannose pyrophosphorylase region is described in another InterPro entry (see IPR005836 from INTERPRO).; GO: 0016779 nucleotidyltransferase activity, 0005976 polysaccharide metabolic process
Probab=52.26 E-value=16 Score=37.17 Aligned_cols=26 Identities=31% Similarity=0.348 Sum_probs=22.8
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
-+..+.+||.+|||.|-.|.+.|.+.
T Consensus 102 ~~~~~~~g~sv~Ip~g~~H~i~n~g~ 127 (151)
T PF01050_consen 102 EEFTLKEGDSVYIPRGAKHRIENPGK 127 (151)
T ss_pred EEEEEcCCCEEEECCCCEEEEECCCC
Confidence 44668899999999999999999864
No 322
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=52.21 E-value=20 Score=38.32 Aligned_cols=47 Identities=15% Similarity=0.019 Sum_probs=40.1
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||++|.|..+.+.. ..|++.....++.++.+.|..||...+.+
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H 124 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVY 124 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 689999999888777664 36899999999999999999999876544
No 323
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=51.98 E-value=27 Score=35.90 Aligned_cols=50 Identities=18% Similarity=0.027 Sum_probs=42.4
Q ss_pred CCCceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 670 RIWPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 670 ~~WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
..++|+||++|.|..+.+... .|++++...++.++.+.+..||..-..+.
T Consensus 65 ~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~ 117 (250)
T cd05123 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYR 117 (250)
T ss_pred CCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 358999999998888877654 58999999999999999999998765554
No 324
>PRK14705 glycogen branching enzyme; Provisional
Probab=51.95 E-value=42 Score=44.65 Aligned_cols=51 Identities=22% Similarity=0.253 Sum_probs=36.0
Q ss_pred CCCCCceeeec----ccEEEEeecCCccccccccchhHHHHHHHHhhCCCCcccccceeeeee
Q 002526 545 GNGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGI 603 (912)
Q Consensus 545 ~~GsnpV~~v~----~~v~K~~~e~g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~la~G~ 603 (912)
+.-||=-.++| .+|+|+|-..-.. .--|+|.-.-|.+++.+ +||.++++=.
T Consensus 154 ~EQSNTSvi~gd~~~~~ilKlfRrl~~G-----~NPdvE~~r~Lteag~~---~vP~llG~ve 208 (1224)
T PRK14705 154 GEQSNTSVIVDDGDSAAIVKFFRVLSAG-----KNPEVELGAALTAAGTS---EVPATLGWVT 208 (1224)
T ss_pred cccCceEEEECCCCccEEEEEeeecCCC-----CCccHHHHHHHhhCCCc---cCCCccEEEE
Confidence 55677777776 5899999843222 22688888889875555 8999997733
No 325
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=51.82 E-value=55 Score=36.39 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=25.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 691 ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 691 ~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.|+++.+..++.++-+.|..||..++-+-
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHr 197 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASRKCIHR 197 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 68899999999999999999999875443
No 326
>PLN03215 ascorbic acid mannose pathway regulator 1; Provisional
Probab=51.66 E-value=16 Score=42.46 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=30.9
Q ss_pred CCCCCCCHHHHHHHHhcCC-HHHHHHHHHHhHHHHHH
Q 002526 19 GDLKIIPDEIICSILEHLT-PRDVGRLACVSSVMYIF 54 (912)
Q Consensus 19 G~l~~LPDElLl~ILs~Ld-~~dL~~La~vsR~fY~~ 54 (912)
...+.||+|||..|...|+ .-|+.++..|||.++.-
T Consensus 2 ~~Ws~Lp~dll~~i~~~l~~~~d~~~~~~vC~sWr~a 38 (373)
T PLN03215 2 ADWSTLPEELLHMIAGRLFSNVELKRFRSICRSWRSS 38 (373)
T ss_pred CChhhCCHHHHHHHHhhCCcHHHHHHHHhhhhhHHHh
Confidence 3567899999999999995 77999999999986543
No 327
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=51.54 E-value=24 Score=37.37 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=40.3
Q ss_pred CCCceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 670 RIWPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 670 ~~WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
....||||++|.|..+.++.. .++++....++.++.+.|+.||..-+-+
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH 144 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIH 144 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 357899999999988777664 3778888999999999999999875433
No 328
>PHA03209 serine/threonine kinase US3; Provisional
Probab=51.16 E-value=61 Score=36.29 Aligned_cols=45 Identities=18% Similarity=0.243 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
+.||||.+|.|..+..+.. .+++.....++.++.+.|..||...+
T Consensus 131 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 178 (357)
T PHA03209 131 ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRI 178 (357)
T ss_pred eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 7899999999977766643 58899999999999999999998753
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=51.02 E-value=56 Score=34.84 Aligned_cols=47 Identities=6% Similarity=-0.054 Sum_probs=36.6
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||+++.|.....+.. .+++.....++.++.+.|..||.-..-+
T Consensus 75 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 75 RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 7899999999876665543 2456777889999999999999875443
No 330
>PHA03211 serine/threonine kinase US3; Provisional
Probab=50.91 E-value=57 Score=38.68 Aligned_cols=45 Identities=13% Similarity=0.166 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||.++.|..+..+.. .|++..+..++.++.+-|..||..-+
T Consensus 234 ~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI 281 (461)
T PHA03211 234 LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGI 281 (461)
T ss_pred EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 7899999999877666643 58999999999999999999998754
No 331
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=50.69 E-value=24 Score=36.86 Aligned_cols=47 Identities=11% Similarity=0.116 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+||+++.|..+.+... .++++....++.+|.+.|+.||...+-+
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 125 (260)
T cd05069 74 PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIH 125 (260)
T ss_pred CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 3799999999977776653 3788999999999999999999876543
No 332
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=50.60 E-value=40 Score=41.76 Aligned_cols=44 Identities=18% Similarity=0.110 Sum_probs=38.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLP 715 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp 715 (912)
..||||.+|.|..+.++.. .++++....++.++.+.|..||...
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5799999999988887754 5788999999999999999999864
No 333
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=50.48 E-value=22 Score=36.35 Aligned_cols=41 Identities=22% Similarity=0.139 Sum_probs=33.3
Q ss_pred ceEEEeecCCCch-hH-H-hhcCCHHHHHHHHHHHHHHHHhhcc
Q 002526 673 PYIITKRCKGKMF-AQ-L-RDALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 673 pYiv~~r~~G~~~-~~-~-~~~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
.||||++|+|..+ .. + ...++.++...++.++.+.+..+|.
T Consensus 92 ~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~ 135 (190)
T cd05145 92 NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ 135 (190)
T ss_pred CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999633 22 2 1267889999999999999999998
No 334
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=50.24 E-value=23 Score=36.82 Aligned_cols=47 Identities=15% Similarity=0.063 Sum_probs=39.3
Q ss_pred CceEEEeecCCCchhHHh-h--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-D--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..+.+.. . .|++++...++.+|-+.|..||.....+
T Consensus 59 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 108 (237)
T cd05576 59 SVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVC 108 (237)
T ss_pred eEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 689999999997776643 2 5899999999999999999999875433
No 335
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=49.97 E-value=66 Score=34.30 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=38.2
Q ss_pred ceEEEeecCCCchhHHhh---------------------------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD---------------------------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~---------------------------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+|++|++|.|..+.+... .|+++....++.++.+.+..||...+.+
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 689999999888877543 3678889999999999999999886554
No 336
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=49.77 E-value=27 Score=36.42 Aligned_cols=47 Identities=13% Similarity=0.163 Sum_probs=40.3
Q ss_pred ceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
+|++|++++|..+.+... .++++....++.++.+.|+.||...+-+.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~ 126 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 126 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 599999999988888753 48899999999999999999999865443
No 337
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=49.52 E-value=27 Score=37.15 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=41.6
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.+|+||++++|..+.++.. .++++....++.++...|+.||.....+.+
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 153 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRD 153 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 6899999999988887642 578999999999999999999988765543
No 338
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=49.49 E-value=9.9 Score=44.54 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=14.1
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||+|||||.+-
T Consensus 296 GI~HRDiKPeNILl~~ 311 (475)
T KOG0615|consen 296 GIIHRDIKPENILLSN 311 (475)
T ss_pred CcccccCCcceEEecc
Confidence 3699999999999965
No 339
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=49.46 E-value=24 Score=38.92 Aligned_cols=47 Identities=13% Similarity=0.000 Sum_probs=40.0
Q ss_pred CCceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 671 IWPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
...||||.+|+|..+.+.. ..|++.....++.+|.+.|..||...+-
T Consensus 69 ~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iv 118 (329)
T cd05588 69 SRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGII 118 (329)
T ss_pred CEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4789999999998776543 3699999999999999999999987643
No 340
>PRK09188 serine/threonine protein kinase; Provisional
Probab=49.35 E-value=11 Score=43.53 Aligned_cols=17 Identities=29% Similarity=0.472 Sum_probs=14.1
Q ss_pred CceEeccc-cCCceeeec
Q 002526 813 CSWIHSDI-MDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~-m~~ni~~~~ 829 (912)
.-+||+|| +|+||++..
T Consensus 130 ~gIiHrDL~KP~NILv~~ 147 (365)
T PRK09188 130 AGITHNDLAKPQNWLMGP 147 (365)
T ss_pred CCCeeCCCCCcceEEEcC
Confidence 35799999 899999943
No 341
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=49.34 E-value=28 Score=36.33 Aligned_cols=50 Identities=10% Similarity=-0.030 Sum_probs=42.1
Q ss_pred CCceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.-+|+||++|.|..+.+... .++++....++.++.+.|+.||...+.+.+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 127 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRD 127 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 37899999999988888743 588999999999999999999987665443
No 342
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=49.02 E-value=28 Score=35.87 Aligned_cols=50 Identities=14% Similarity=0.112 Sum_probs=42.3
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-.|++|+++.|..+.++. ..+++.....++.++.+.|..||...+.+...
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl 125 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDI 125 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 689999999998888764 46899999999999999999999876655433
No 343
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=48.92 E-value=45 Score=39.66 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=23.6
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
-+..++|||.+|||++=.|...|.++
T Consensus 415 ~~~~l~~GDsi~ip~~~~H~~~N~g~ 440 (468)
T TIGR01479 415 ETLLLTENESTYIPLGVIHRLENPGK 440 (468)
T ss_pred EEEEecCCCEEEECCCCcEEEEcCCC
Confidence 55789999999999999999999874
No 344
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=48.89 E-value=73 Score=34.41 Aligned_cols=46 Identities=11% Similarity=0.064 Sum_probs=35.6
Q ss_pred CceEEEeecCCCchhHHh-----------hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----------DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----------~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
..|+||.++.|..+.-+. ..|+++....++.++.+.|+.||..-+-
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~iv 130 (317)
T cd07868 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVL 130 (317)
T ss_pred EEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 568999998875433322 1488999999999999999999987543
No 345
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=48.80 E-value=24 Score=36.55 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=33.8
Q ss_pred eEEEeecCCCchhHH--h-hcCCHHHHHHHHHHHHHHHHhh-ccc
Q 002526 674 YIITKRCKGKMFAQL--R-DALSGEDVLNLASFLGEQLRNL-HLL 714 (912)
Q Consensus 674 Yiv~~r~~G~~~~~~--~-~~l~~~d~~~la~~lg~~~~~l-H~l 714 (912)
||||++|.|..+... . ..++.++...++.++.+.|..+ |..
T Consensus 93 ~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~ 137 (190)
T cd05147 93 VLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC 137 (190)
T ss_pred EEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 899999999766433 1 3688899999999999999998 665
No 346
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=48.72 E-value=28 Score=36.42 Aligned_cols=48 Identities=17% Similarity=0.098 Sum_probs=41.4
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
=.|+||++|.|..+.++.. .+++.....++.++.+.+..||...+.+.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 130 (267)
T cd06645 80 KLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHR 130 (267)
T ss_pred EEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4799999999999988754 68999999999999999999998765443
No 347
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=48.45 E-value=61 Score=35.94 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=23.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 691 ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 691 ~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.++..+...++.++.+.|+.||...+-+
T Consensus 175 ~~~~~~~~~~~~qi~~al~~lH~~~i~H 202 (343)
T cd05103 175 VLTLEDLICYSFQVAKGMEFLASRKCIH 202 (343)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4778888999999999999999875433
No 348
>TIGR03214 ura-cupin putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).
Probab=48.44 E-value=19 Score=39.57 Aligned_cols=26 Identities=8% Similarity=-0.204 Sum_probs=23.5
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
-+..++|||++|||++--|+..|+++
T Consensus 218 ~~~~V~~GD~i~i~~~~~h~~~~~G~ 243 (260)
T TIGR03214 218 NWVPVEAGDYIWMGAYCPQACYAGGR 243 (260)
T ss_pred EEEEecCCCEEEECCCCCEEEEecCC
Confidence 45678999999999999999999975
No 349
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=48.42 E-value=22 Score=39.03 Aligned_cols=46 Identities=11% Similarity=-0.035 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||++|+|..+.+.. ..|+++....++.++.+.|+.||...+-
T Consensus 70 ~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~iv 118 (320)
T cd05590 70 RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGII 118 (320)
T ss_pred EEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 589999999997776543 3689999999999999999999987643
No 350
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=48.37 E-value=31 Score=35.84 Aligned_cols=48 Identities=15% Similarity=0.020 Sum_probs=41.1
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+|+|..+.+... .+++..+..++.++...++.||.....+.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 126 (256)
T cd05039 74 PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHR 126 (256)
T ss_pred CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccch
Confidence 5799999999988877653 58899999999999999999998876544
No 351
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=48.34 E-value=13 Score=39.74 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecC
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFS 872 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~ 872 (912)
++|+|++.-||.+.. +. .++||||
T Consensus 113 ivHGDLTtsNiIl~~-----------------------------~~-----i~~IDfG 136 (204)
T COG3642 113 IVHGDLTTSNIILSG-----------------------------GR-----IYFIDFG 136 (204)
T ss_pred eecCCCccceEEEeC-----------------------------Cc-----EEEEECC
No 352
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=48.32 E-value=82 Score=33.24 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=39.3
Q ss_pred CceEEEeecCCCchhHHhh-----------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-+|+++.++.|..+.+..+ .|++.....++.++.+.|+.||.....+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H 140 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIH 140 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 5789999999888877653 3789999999999999999999876544
No 353
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=48.10 E-value=27 Score=36.27 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=39.3
Q ss_pred ceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+|+||++|+|.++.+... .++++....++.++...+..||...+-+
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h 127 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIH 127 (261)
T ss_pred eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 699999999988877754 5889999999999999999999875433
No 354
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=48.08 E-value=23 Score=40.12 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=40.5
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|+|..+.++.. .++++....++.++.+.|+.||..-+-+
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5799999999988888765 5788999999999999999999976543
No 355
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=48.07 E-value=71 Score=33.69 Aligned_cols=46 Identities=9% Similarity=-0.045 Sum_probs=36.6
Q ss_pred ceEEEeecCCCchhHHh-----hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~-----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.|+||.+|.|. +.... ..|++.+...++.++.+.|+.||....-+.
T Consensus 74 ~~~v~e~~~~~-l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~ 124 (284)
T cd07860 74 LYLVFEFLHQD-LKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 124 (284)
T ss_pred EEEEeeccccC-HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 69999999874 44433 358899999999999999999998765443
No 356
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=48.05 E-value=27 Score=37.09 Aligned_cols=46 Identities=24% Similarity=0.152 Sum_probs=39.1
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
=.||||++|+|..|.+... .|++++...++.++.+.|..||..-.-
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 131 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNII 131 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3799999999987776543 589999999999999999999987643
No 357
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=48.02 E-value=30 Score=37.37 Aligned_cols=47 Identities=9% Similarity=0.092 Sum_probs=41.3
Q ss_pred ceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.|+||.+++|..+++... .++++++..++.+|...+..||.......
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~ 139 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHR 139 (296)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 799999999999988766 48899999999999999999998876544
No 358
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=48.00 E-value=33 Score=34.93 Aligned_cols=50 Identities=16% Similarity=0.026 Sum_probs=42.9
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-.|+||+++.|..+.+... .+++++...++.++.+.|..||.......+.
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl 127 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDI 127 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence 6899999999988888765 6789999999999999999999976655443
No 359
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=47.82 E-value=46 Score=36.65 Aligned_cols=46 Identities=24% Similarity=0.186 Sum_probs=37.4
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|++|..+ |..+.++.. .|++++...++.++.+.|..||...+-+
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 141 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIH 141 (343)
T ss_pred cEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 568999988 556666654 6999999999999999999999875433
No 360
>PHA03207 serine/threonine kinase US3; Provisional
Probab=47.64 E-value=66 Score=36.60 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHh--hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR--DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~--~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.|+||.++.|..+..+. ..|++.+...++.+|.+.|..||...+-
T Consensus 160 ~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~giv 207 (392)
T PHA03207 160 TVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGII 207 (392)
T ss_pred EEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 578999999987777663 3689999999999999999999987543
No 361
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=47.39 E-value=28 Score=37.49 Aligned_cols=49 Identities=8% Similarity=0.055 Sum_probs=42.0
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
-+|+||.+++|..+++... .+++.+...++.++.+.|+.||...+...+
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d 141 (296)
T cd06654 91 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (296)
T ss_pred EEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 5799999999998888765 488999999999999999999998765443
No 362
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=47.24 E-value=88 Score=32.74 Aligned_cols=48 Identities=13% Similarity=-0.045 Sum_probs=40.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.|++|++++|..+.+... .|++.....++.++.+.|..||.-.+...
T Consensus 80 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~ 130 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHR 130 (264)
T ss_pred EEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 5789999999988876543 57889999999999999999998865553
No 363
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=47.23 E-value=12 Score=40.96 Aligned_cols=17 Identities=12% Similarity=0.223 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 115 ~~ivHrDikp~NIll~~ 131 (325)
T cd05594 115 KNVVYRDLKLENLMLDK 131 (325)
T ss_pred CCEEecCCCCCeEEECC
Confidence 45999999999999955
No 364
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=47.09 E-value=90 Score=32.97 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=37.5
Q ss_pred ceEEEeecCCCchhHHh-h---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLR-D---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~-~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.|++|.+++|-.+.+.. . .+++.....++.++.+.|..||....-+-
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~ 133 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHR 133 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 57899999875555443 2 58999999999999999999998875443
No 365
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=47.09 E-value=26 Score=38.54 Aligned_cols=46 Identities=15% Similarity=0.034 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
=.||||++|+|..+.+.. ..|+++....++.+|.+.|+.||..-+-
T Consensus 70 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iv 118 (327)
T cd05617 70 RLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGII 118 (327)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 479999999998876543 3699999999999999999999987543
No 366
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=46.94 E-value=33 Score=35.76 Aligned_cols=49 Identities=20% Similarity=0.079 Sum_probs=41.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.+|+||.+++|..+.+... .|++.....++.++.+.|..||.....+.+
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d 131 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRD 131 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 7899999999988887764 588889999999999999999987655443
No 367
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=46.72 E-value=26 Score=37.75 Aligned_cols=46 Identities=11% Similarity=0.153 Sum_probs=40.2
Q ss_pred ceEEEeecCCCchhHHh--hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLR--DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~--~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.|+||++|+|..++++. ..|+++....++.++.+.|..||...+-+
T Consensus 94 ~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH 141 (292)
T cd06658 94 LWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIH 141 (292)
T ss_pred EEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 59999999999988875 36899999999999999999999886533
No 368
>PHA03212 serine/threonine kinase US3; Provisional
Probab=46.71 E-value=9.4 Score=43.71 Aligned_cols=16 Identities=31% Similarity=0.663 Sum_probs=14.1
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-+||+||.|+||++..
T Consensus 202 ~IvHrDiKP~NIll~~ 217 (391)
T PHA03212 202 RIIHRDIKAENIFINH 217 (391)
T ss_pred CcccCCCChHhEEEcC
Confidence 3799999999999965
No 369
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=46.55 E-value=30 Score=36.01 Aligned_cols=47 Identities=11% Similarity=0.080 Sum_probs=39.5
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++|.|..+.+... .++.+....++.++.+.|+.||....-+
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H 126 (261)
T cd05072 75 PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 126 (261)
T ss_pred CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5899999999988877653 4778889999999999999999876533
No 370
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=46.30 E-value=27 Score=37.50 Aligned_cols=47 Identities=19% Similarity=0.106 Sum_probs=40.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|.|..+.+... .++++....++.++.+.|+.||...+-+
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 124 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVY 124 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 6899999999988776543 6899999999999999999999986443
No 371
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=46.00 E-value=11 Score=44.32 Aligned_cols=18 Identities=22% Similarity=0.599 Sum_probs=15.5
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
..-+||+||.|+||++.+
T Consensus 187 ~~~ivHrDlkp~NIll~~ 204 (478)
T PTZ00267 187 SRKMMHRDLKSANIFLMP 204 (478)
T ss_pred hCCEEECCcCHHhEEECC
Confidence 346999999999999965
No 372
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=45.90 E-value=13 Score=33.13 Aligned_cols=18 Identities=28% Similarity=0.614 Sum_probs=14.6
Q ss_pred EEEEEcCCCEEEeCCCCc
Q 002526 333 IECTQLPGETIVVPSGWW 350 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWW 350 (912)
-...+.|||++|+|+||-
T Consensus 44 ~~~~~~aGD~~~~p~G~~ 61 (74)
T PF05899_consen 44 ETVTFKAGDAFFLPKGWT 61 (74)
T ss_dssp EEEEEETTEEEEE-TTEE
T ss_pred CEEEEcCCcEEEECCCCE
Confidence 457799999999999993
No 373
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=45.82 E-value=26 Score=38.51 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||++|+|..+.+.. ..+++.+...+|.++.+.|..||...+
T Consensus 75 ~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i 122 (323)
T cd05615 75 RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGI 122 (323)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 689999999998776654 368999999999999999999998754
No 374
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=45.80 E-value=12 Score=39.73 Aligned_cols=17 Identities=24% Similarity=0.483 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 128 ~~iiH~dlkp~Nil~~~ 144 (279)
T cd05109 128 VRLVHRDLAARNVLVKS 144 (279)
T ss_pred CCeeccccccceEEEcC
Confidence 45899999999999965
No 375
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=45.67 E-value=11 Score=38.81 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=27.9
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhc
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLH 712 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH 712 (912)
..|+||.+|.|..+.+.. ..++......++.++.+.|..||
T Consensus 72 ~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh 115 (260)
T PF00069_consen 72 YLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLH 115 (260)
T ss_dssp EEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc
Confidence 678999999997666543 34556666666666666665555
No 376
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=45.64 E-value=12 Score=42.00 Aligned_cols=42 Identities=21% Similarity=0.427 Sum_probs=31.8
Q ss_pred CCCHhHHhhhhhcCCcchhhhhhhhhcccCCCCCCCCCceEeccccCCceeeecc
Q 002526 776 PIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (912)
Q Consensus 776 ~lp~~l~~~~~~ylp~d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~ 830 (912)
-||...+.+|.--. ++-|+.+|. .--+||+||+|-|||+..+
T Consensus 163 ~ipE~Ilg~Itvat----V~AL~yLK~---------~lkiIHRDvKPSNILldr~ 204 (361)
T KOG1006|consen 163 RIPENILGHITVAT----VDALDYLKE---------ELKIIHRDVKPSNILLDRH 204 (361)
T ss_pred cCcHhhhhheeeee----hhHHHHHHH---------HhhhhhccCChhheEEecC
Confidence 49999999886544 444555444 4568999999999999884
No 377
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=45.46 E-value=31 Score=35.47 Aligned_cols=48 Identities=10% Similarity=-0.014 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+++|..+.+... .++++....++.+|.+.|+.||.....+.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~ 127 (256)
T cd08530 73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHR 127 (256)
T ss_pred EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence 6899999999998887754 48889999999999999999998865443
No 378
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=45.18 E-value=9.8 Score=41.68 Aligned_cols=16 Identities=31% Similarity=0.414 Sum_probs=14.2
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 121 ~ivH~dlkp~Nill~~ 136 (324)
T cd05587 121 GIIYRDLKLDNVMLDA 136 (324)
T ss_pred CeEecCCCHHHeEEcC
Confidence 3799999999999965
No 379
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=44.76 E-value=31 Score=37.25 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=40.5
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
=.||||++|+|..+++... .+++++...++.++.+.|..||....-.
T Consensus 92 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH 140 (297)
T cd06659 92 ELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIH 140 (297)
T ss_pred eEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4799999999988888765 5889999999999999999999875433
No 380
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=44.62 E-value=28 Score=39.36 Aligned_cols=46 Identities=11% Similarity=0.101 Sum_probs=39.7
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
..||||.+|+|..+.++.. .+++.....++.+|.+.|..||..-+-
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 164 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 164 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 6899999999988888765 578888999999999999999987543
No 381
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=44.51 E-value=9.8 Score=41.70 Aligned_cols=17 Identities=12% Similarity=0.378 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||+|+||++..
T Consensus 115 ~giiHrDlkp~Nili~~ 131 (325)
T cd05602 115 LNIVYRDLKPENILLDS 131 (325)
T ss_pred CCeEecCCCHHHeEECC
Confidence 35899999999999954
No 382
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=44.48 E-value=33 Score=36.03 Aligned_cols=50 Identities=10% Similarity=0.038 Sum_probs=42.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
.+||||.++.|..++.++. .+++.+...++.++.+.|+.||.....+.+.
T Consensus 74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl 126 (282)
T cd07831 74 RLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDI 126 (282)
T ss_pred cEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccc
Confidence 6799999999988877765 5899999999999999999999887655433
No 383
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=44.45 E-value=30 Score=36.21 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=41.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
=+|+||.++.|...+.+.. .+++..+..++.++.+.|..||..-..+.+
T Consensus 72 ~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 123 (283)
T cd05118 72 DLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRD 123 (283)
T ss_pred CEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 4799999999976666655 689999999999999999999987655443
No 384
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=44.33 E-value=34 Score=36.21 Aligned_cols=48 Identities=17% Similarity=0.126 Sum_probs=40.7
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||.+++|..+..+. ..|+++....++.++.+.|..||.....+.
T Consensus 76 ~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~ 127 (282)
T cd06643 76 NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127 (282)
T ss_pred EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 579999999998887764 358999999999999999999999765443
No 385
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=44.23 E-value=31 Score=36.81 Aligned_cols=47 Identities=13% Similarity=-0.052 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
=.|+||.+|.|..+.+.. ..|+++....++.++...|..||..-+-+
T Consensus 71 ~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 120 (279)
T cd05633 71 KLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120 (279)
T ss_pred eEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 369999999998887653 36899999999999999999999875443
No 386
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=44.18 E-value=32 Score=35.81 Aligned_cols=50 Identities=16% Similarity=0.078 Sum_probs=42.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPFNE 721 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~~~ 721 (912)
-.|+||++++|..+.++.. .+++.....++.++.+.|..||..-..+.+.
T Consensus 77 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i 129 (268)
T cd06630 77 HFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDV 129 (268)
T ss_pred eEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 6899999999988887754 5888999999999999999999886655433
No 387
>PRK10345 hypothetical protein; Provisional
Probab=44.17 E-value=14 Score=39.22 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=31.4
Q ss_pred cccccCCCCCceeeec----ccEEEEeecC--CccccccccchhHHHHHHHHhhCCCCccccccee
Q 002526 540 EKLPVGNGSNPVYLMA----DCVVKIFVEG--GFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVL 599 (912)
Q Consensus 540 ~~~p~~~GsnpV~~v~----~~v~K~~~e~--g~~~s~~~~~~E~~~y~~L~~~~~~L~~~~P~~l 599 (912)
...++|+|+.=+..+. ..+||+.... +.... +-.|+..|..|.+-+ .-..+||++.
T Consensus 6 ~~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~---~~rEi~~l~~L~~~~-~~h~nIvr~y 67 (210)
T PRK10345 6 EQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKE---IRRELKYYAHLSRRL-IDWSGIPRYY 67 (210)
T ss_pred CcceecCCCceEEEECCCCcCeEEEEEeccccchHHH---HHHHHHHHHHhhccC-CCCcccceee
Confidence 4457788876544223 5678887633 22222 457998888875422 2233466654
No 388
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=44.16 E-value=17 Score=41.85 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=0.0
Q ss_pred chhhhhhhhhcccCCCCCCCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeec
Q 002526 792 DFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDF 871 (912)
Q Consensus 792 d~~~l~~~~~~~~~~~~~~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF 871 (912)
|++.=+.++-. ..+ +||+||+++|||+.. .|.-..|-||
T Consensus 150 diArGm~YLH~-------~~~--iIHrDLK~~NiLv~~--------------------------------~~~~~KI~DF 188 (362)
T KOG0192|consen 150 DIARGMEYLHS-------EGP--IIHRDLKSDNILVDL--------------------------------KGKTLKIADF 188 (362)
T ss_pred HHHHHHHHHhc-------CCC--eeecccChhhEEEcC--------------------------------CCCEEEECCC
Q ss_pred C
Q 002526 872 S 872 (912)
Q Consensus 872 ~ 872 (912)
|
T Consensus 189 G 189 (362)
T KOG0192|consen 189 G 189 (362)
T ss_pred c
No 389
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=43.99 E-value=31 Score=37.73 Aligned_cols=47 Identities=11% Similarity=-0.053 Sum_probs=39.6
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||++|+|..+..... .+++.+...++.++.+.|+.||...+-+
T Consensus 70 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH 119 (318)
T cd05570 70 RLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIY 119 (318)
T ss_pred EEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEc
Confidence 5799999999987765433 6899999999999999999999876544
No 390
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=43.90 E-value=62 Score=36.25 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.++.|.....+.. .|+++....++.++.+.|..||...+-+
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 126 (372)
T cd07853 78 EIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILH 126 (372)
T ss_pred eEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 5799999999866555543 6899999999999999999999986544
No 391
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=43.73 E-value=61 Score=42.41 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=37.8
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhccc
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
..||||.+|.|..|.++.. .|++.....++.+|...|..||..
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~ 137 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL 137 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6799999999987776543 589999999999999999999985
No 392
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=43.65 E-value=12 Score=45.01 Aligned_cols=25 Identities=32% Similarity=0.570 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecC
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFS 872 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~ 872 (912)
+||+||+|||+|+ +..|+ ..|=|||
T Consensus 262 yIHRDIKPdNlLi-------------------------D~~GH--------iKLSDFG 286 (550)
T KOG0605|consen 262 YIHRDIKPDNLLI-------------------------DAKGH--------IKLSDFG 286 (550)
T ss_pred cccccCChhheee-------------------------cCCCC--------Eeecccc
No 393
>COG1898 RfbC dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane]
Probab=43.59 E-value=1.4e+02 Score=31.28 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=46.6
Q ss_pred eEEecCCCCCCccccCCCCCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCC
Q 002526 253 WVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKP 332 (912)
Q Consensus 253 wL~IGp~GSgTplH~Dp~~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~ 332 (912)
.+.+..+|..-.+|++.-.-.=..+.|.|+=.-+++... -.+|+ +. +-
T Consensus 48 n~S~S~~GvlRGlHyq~~~q~klv~~v~G~v~dv~vDlR------------------~~SpT-----------yg---~~ 95 (173)
T COG1898 48 NHSFSYPGVLRGLHYQHKPQGKLVRVVSGKVFDVAVDLR------------------KDSPT-----------YG---KW 95 (173)
T ss_pred eEEEecCCeeEEEEcccCCCCeEEEEecCeEEEEEEEcc------------------CCCCC-----------cc---eE
Confidence 455666788888999875411244445554333322211 12233 11 22
Q ss_pred EEEEEcCC--CEEEeCCCCceeeEeCCCcEEE
Q 002526 333 IECTQLPG--ETIVVPSGWWHCILNLETTIAV 362 (912)
Q Consensus 333 ~E~vLePG--DvLFVPsGWWHqV~NLddSIAV 362 (912)
..+++.+- .+|+||+|+.|-..+|+++..+
T Consensus 96 ~~~~ls~~N~~~l~IP~G~AHGf~~L~d~~~~ 127 (173)
T COG1898 96 VGVVLSAENKRQLYIPPGFAHGFQVLSDDAEV 127 (173)
T ss_pred EEEEecCCCceEEEeCCcccceeEEccCceEE
Confidence 44555554 7999999999999999987733
No 394
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=43.58 E-value=32 Score=37.69 Aligned_cols=46 Identities=20% Similarity=0.091 Sum_probs=38.9
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||.+|+|..+.+.. ..+++++...++.++.+.|..||..-+-
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 579999999997776543 4699999999999999999999987543
No 395
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=43.57 E-value=31 Score=37.52 Aligned_cols=46 Identities=15% Similarity=0.038 Sum_probs=39.0
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||.+|+|..+.+... .+++.....++.++.+.|..||...+-
T Consensus 67 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 115 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVI 115 (312)
T ss_pred eEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 5799999999987765543 689999999999999999999987543
No 396
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=43.53 E-value=35 Score=35.60 Aligned_cols=48 Identities=15% Similarity=-0.040 Sum_probs=40.2
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-+|+||++|+|..+.+... .|++.++..++.++...|..||...+.+.
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~ 126 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHR 126 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 5799999998877765543 58999999999999999999998866544
No 397
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=43.32 E-value=10 Score=41.51 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.++||++..
T Consensus 124 ~~ivHrDlkp~Nili~~ 140 (332)
T cd05614 124 LGIVYRDIKLENILLDS 140 (332)
T ss_pred CCcEecCCCHHHeEECC
Confidence 35899999999999965
No 398
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=43.08 E-value=34 Score=37.76 Aligned_cols=45 Identities=11% Similarity=-0.011 Sum_probs=38.5
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-.||||++|+|..+..... .|++++...++.+|.+.|+.||...+
T Consensus 69 ~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 116 (328)
T cd05593 69 RLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI 116 (328)
T ss_pred EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 5799999999987765542 68899999999999999999998754
No 399
>PHA03212 serine/threonine kinase US3; Provisional
Probab=43.02 E-value=93 Score=35.66 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=38.1
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..|+||.++.|..+..+.. .|+..+...++.++.+.|..||...+
T Consensus 157 ~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~I 203 (391)
T PHA03212 157 FTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRI 203 (391)
T ss_pred eeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 6899999998876655543 68999999999999999999998754
No 400
>PTZ00036 glycogen synthase kinase; Provisional
Probab=42.94 E-value=12 Score=43.62 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=14.4
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
.+||+||.|+||++.+
T Consensus 190 ~IiHrDLKp~NILl~~ 205 (440)
T PTZ00036 190 FICHRDLKPQNLLIDP 205 (440)
T ss_pred CEecCCcCHHHEEEcC
Confidence 4899999999999965
No 401
>PTZ00284 protein kinase; Provisional
Probab=42.88 E-value=12 Score=43.52 Aligned_cols=17 Identities=29% Similarity=0.600 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
+-+||+||+|+||++..
T Consensus 251 ~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 251 LHLMHTDLKPENILMET 267 (467)
T ss_pred CCeecCCCCHHHEEEec
Confidence 35899999999999965
No 402
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=42.69 E-value=39 Score=36.48 Aligned_cols=48 Identities=8% Similarity=0.081 Sum_probs=41.4
Q ss_pred ceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
+|+||.+++|..+++... .+++.+...++.+|.+.|..||...+.+.+
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~d 140 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRD 140 (297)
T ss_pred EEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 699999999999988754 588999999999999999999988765543
No 403
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=42.67 E-value=31 Score=35.52 Aligned_cols=42 Identities=26% Similarity=0.296 Sum_probs=36.5
Q ss_pred ceEEEeecCCCchhHHh-------hcCCHHHHHHHHHHHHHHHHhhccc
Q 002526 673 PYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~-------~~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
.|++|++|+|..+.++. ..|+++....++.++.+.++.||.+
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 124 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNR 124 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 69999999998887764 3678999999999999999999944
No 404
>PF09313 DUF1971: Domain of unknown function (DUF1971); InterPro: IPR015392 This uncharacterised domain is predominantly found in bacterial Tellurite resistance proteins. ; PDB: 3BB6_C 3M70_A 3DL3_I.
Probab=42.53 E-value=1.3e+02 Score=27.79 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=41.1
Q ss_pred CCcccEEEEEeEEEEEEeCCCCCCCcceeeecCCCCCccCCCCcchhhhhhcCCCCCCCCCCEEEEEcCCCEEEeCCCCc
Q 002526 271 LTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWW 350 (912)
Q Consensus 271 ~TsawnaqI~GrKrWiLfPP~~~p~gv~~~~~~~~s~Vdv~sPdsleW~l~~yP~l~~a~~~~E~vLePGDvLFVPsGWW 350 (912)
++.+.+.+++|+=+++.+.+... ...-++.+.+|+.-+||+.-|
T Consensus 24 GtWg~l~Vl~G~L~f~~~~~~~~------------------------------------~~~~~~~~~~~~~~~i~Pq~w 67 (82)
T PF09313_consen 24 GTWGKLRVLEGELKFYGLDEEGE------------------------------------EPEEEVFIPAGQPPVIEPQQW 67 (82)
T ss_dssp TEEEEEEEEESEEEEEEESSTT-------------------------------------SESEEEEEETTEEEEE-TT-E
T ss_pred CeEEEEEEEeeEEEEEEECCCCC------------------------------------ceeEEEEeCCCCCceeCCCce
Confidence 45567889999999988877421 013568899999999999999
Q ss_pred eeeEeCCCcEEE
Q 002526 351 HCILNLETTIAV 362 (912)
Q Consensus 351 HqV~NLddSIAV 362 (912)
|.|..+++-+-+
T Consensus 68 H~V~p~s~D~~f 79 (82)
T PF09313_consen 68 HRVEPLSDDLRF 79 (82)
T ss_dssp EEEEESSTT-EE
T ss_pred EEEEECCCCEEE
Confidence 999999875544
No 405
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=42.50 E-value=12 Score=41.11 Aligned_cols=16 Identities=13% Similarity=0.287 Sum_probs=14.1
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 115 ~ivHrDlkp~NIll~~ 130 (323)
T cd05571 115 DVVYRDLKLENLMLDK 130 (323)
T ss_pred CeEeCCCCHHHEEECC
Confidence 3799999999999955
No 406
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=42.44 E-value=12 Score=41.97 Aligned_cols=17 Identities=35% Similarity=0.688 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 120 ~givHrDlKp~NILi~~ 136 (363)
T cd05628 120 LGFIHRDIKPDNLLLDS 136 (363)
T ss_pred CCeEecCCCHHHeEECC
Confidence 45899999999999944
No 407
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=42.35 E-value=50 Score=39.02 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=40.8
Q ss_pred CCCCceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhccc
Q 002526 669 NRIWPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLL 714 (912)
Q Consensus 669 ~~~WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~l 714 (912)
+..+-|++|.||.|-.|-.+|. .+|+++..--|+.+-..|--||.+
T Consensus 148 t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml 198 (459)
T KOG0610|consen 148 TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML 198 (459)
T ss_pred ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence 4468999999999999999998 567889999999999999999998
No 408
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=42.35 E-value=11 Score=41.21 Aligned_cols=16 Identities=13% Similarity=0.422 Sum_probs=14.3
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 116 ~ivHrDlkp~Nili~~ 131 (330)
T cd05586 116 DIVYRDLKPENILLDA 131 (330)
T ss_pred CeEeccCCHHHeEECC
Confidence 3799999999999965
No 409
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=42.34 E-value=12 Score=41.97 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=14.6
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 120 ~~ivHrDlkp~Nill~~ 136 (376)
T cd05598 120 MGFIHRDIKPDNILIDR 136 (376)
T ss_pred CCeEeCCCCHHHEEECC
Confidence 34899999999999954
No 410
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=42.27 E-value=32 Score=37.72 Aligned_cols=45 Identities=18% Similarity=0.069 Sum_probs=38.0
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||.+|+|..+.+.. ..+++++...++.++.+.|..||..-+
T Consensus 70 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i 117 (330)
T cd05586 70 DLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI 117 (330)
T ss_pred eEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 689999999997765443 368999999999999999999998754
No 411
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=42.26 E-value=33 Score=37.57 Aligned_cols=47 Identities=11% Similarity=-0.099 Sum_probs=39.2
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..+.+... .+++.....++.++.+.|+.||...+-+
T Consensus 70 ~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 119 (316)
T cd05620 70 HLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIY 119 (316)
T ss_pred EEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 6899999999977765432 6889999999999999999999876443
No 412
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=42.06 E-value=16 Score=44.44 Aligned_cols=16 Identities=19% Similarity=0.586 Sum_probs=14.5
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+|++|.||++.+
T Consensus 280 GffHaDpHPGNIlv~~ 295 (537)
T PRK04750 280 GFFHADMHPGNIFVSY 295 (537)
T ss_pred CeeeCCCChHHeEEec
Confidence 4899999999999966
No 413
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=41.98 E-value=13 Score=42.77 Aligned_cols=17 Identities=18% Similarity=0.343 Sum_probs=15.1
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
--+||+||+|||||+..
T Consensus 144 ~gIiyRDlKPENILLd~ 160 (357)
T KOG0598|consen 144 KGIIYRDLKPENILLDE 160 (357)
T ss_pred CCeeeccCCHHHeeecC
Confidence 45899999999999966
No 414
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=41.90 E-value=37 Score=36.57 Aligned_cols=49 Identities=8% Similarity=0.055 Sum_probs=42.3
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPPFN 720 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~~~ 720 (912)
.+|+||++++|..+.+... .+++.+...++.++.+.|+.||.....+..
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~d 140 (293)
T cd06647 90 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 140 (293)
T ss_pred cEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence 6899999999988888765 578999999999999999999998765543
No 415
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=41.88 E-value=13 Score=40.01 Aligned_cols=16 Identities=19% Similarity=0.266 Sum_probs=13.9
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 128 ~ivH~Dlkp~Nil~~~ 143 (317)
T cd07867 128 WVLHRDLKPANILVMG 143 (317)
T ss_pred CEEcCCCCHHHEEEcc
Confidence 4899999999999954
No 416
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=41.75 E-value=34 Score=35.27 Aligned_cols=10 Identities=30% Similarity=0.365 Sum_probs=7.6
Q ss_pred ccEEEEeecC
Q 002526 556 DCVVKIFVEG 565 (912)
Q Consensus 556 ~~v~K~~~e~ 565 (912)
.+|+|++-..
T Consensus 26 ~~~~K~~~~~ 35 (260)
T PF00069_consen 26 KVAVKIIDKS 35 (260)
T ss_dssp EEEEEEEEST
T ss_pred EEEEEEeccc
Confidence 4899999844
No 417
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=41.52 E-value=12 Score=42.12 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 120 ~~ivHrDlKp~NILl~~ 136 (382)
T cd05625 120 MGFIHRDIKPDNILIDR 136 (382)
T ss_pred CCeecCCCCHHHEEECC
Confidence 45899999999999954
No 418
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=41.42 E-value=37 Score=37.42 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=39.7
Q ss_pred CceEEEeecCCCchhHHh----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|+|-.|.+.. ..|+++....++.++.+.|..||...+-+
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 679999999998887765 35889999999999999999999875443
No 419
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=41.31 E-value=40 Score=35.29 Aligned_cols=48 Identities=15% Similarity=0.129 Sum_probs=39.8
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.||||.+|+|..+.+... .|+++....++.++...|+.||.-.+-..
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~ 135 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHR 135 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 4789999999987777543 48899999999999999999998765443
No 420
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=41.30 E-value=38 Score=36.28 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=40.6
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.+|+||++++|..+.+... .++.+.+..++.++.+.|+.||..-+..
T Consensus 90 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H 138 (285)
T cd06648 90 ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIH 138 (285)
T ss_pred eEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 6799999999988887653 5889999999999999999999976544
No 421
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=41.10 E-value=39 Score=36.49 Aligned_cols=47 Identities=17% Similarity=-0.005 Sum_probs=40.8
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..|+||++++|..+++... .++++....++.++.+.|+.||....-+
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 7899999999988887763 5889999999999999999999886543
No 422
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=40.72 E-value=42 Score=34.81 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=40.4
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.|+||++|+|..+.++.. .++++.+..++.++-+.|+.||.....+.
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 130 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHR 130 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 4699999999988887653 37889999999999999999998765444
No 423
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=40.63 E-value=41 Score=34.84 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=38.6
Q ss_pred ceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
.|+||.++.|..+++... .++++....++.++.+.++.||..-+-+
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h 123 (256)
T cd05112 74 ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIH 123 (256)
T ss_pred eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 689999999988877643 4889999999999999999999775433
No 424
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=40.62 E-value=15 Score=47.70 Aligned_cols=18 Identities=33% Similarity=0.672 Sum_probs=15.8
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
.--|||+||+|||||+..
T Consensus 193 ~mgyVHRDiKPDNvLld~ 210 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDK 210 (1317)
T ss_pred hccceeccCCcceeEecc
Confidence 456999999999999966
No 425
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=40.57 E-value=87 Score=40.69 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=36.8
Q ss_pred CceEEEeecCCCchhHHhh--------------cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD--------------ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--------------~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
.+|+||.+|+|..+.++.. .++..+...++.++.+.|..||...+
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI 134 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV 134 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 6899999999988877543 34456778899999999999999754
No 426
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=40.54 E-value=13 Score=43.12 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=36.6
Q ss_pred CCCCceEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCCcch-hhhcceeee
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGKC-FLLNSICVS 888 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~Gd~-~~~~~~~~~ 888 (912)
+-..-++|+||.||||++.... + ..-..-++|||.+..... ..+..+|-+
T Consensus 151 lH~~gvvHrDlKpEN~L~~~~~-----------------------~------~~~~ik~~DFGla~~~~~~~~~~~~~Gt 201 (382)
T KOG0032|consen 151 LHSLGVVHRDLKPENLLLASKD-----------------------E------GSGRIKLIDFGLAKFIKPGERLHTIVGT 201 (382)
T ss_pred HHhCCceeccCCHHHeeecccc-----------------------C------CCCcEEEeeCCCceEccCCceEeeecCC
Confidence 3457899999999999997621 1 123567899999988775 567777754
No 427
>PHA03210 serine/threonine kinase US3; Provisional
Probab=40.51 E-value=12 Score=44.29 Aligned_cols=16 Identities=31% Similarity=0.580 Sum_probs=14.3
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-+||+||+|+||++..
T Consensus 287 gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 287 KLIHRDIKLENIFLNC 302 (501)
T ss_pred CeecCCCCHHHEEECC
Confidence 4899999999999965
No 428
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=40.11 E-value=38 Score=37.12 Aligned_cols=47 Identities=13% Similarity=0.004 Sum_probs=39.3
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.||||.+|+|..+.+... .++++....++.++.+.|..||...+-+
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05587 75 RLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIY 124 (324)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4799999999987765543 5889999999999999999999986533
No 429
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=40.11 E-value=38 Score=37.78 Aligned_cols=46 Identities=22% Similarity=0.116 Sum_probs=39.5
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||.+|+|..+.+.. ..|++.....++.++.+.|..||...+-
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 579999999998887764 3689999999999999999999987543
No 430
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=39.94 E-value=13 Score=40.70 Aligned_cols=17 Identities=29% Similarity=0.311 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 115 ~~ivH~dlkp~NIli~~ 131 (320)
T cd05590 115 KGIIYRDLKLDNVLLDH 131 (320)
T ss_pred CCeEeCCCCHHHeEECC
Confidence 35899999999999955
No 431
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=39.92 E-value=14 Score=40.35 Aligned_cols=17 Identities=18% Similarity=0.325 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 112 ~~i~HrDlkp~Nili~~ 128 (312)
T cd05585 112 FNVIYRDLKPENILLDY 128 (312)
T ss_pred CCeEeCCCCHHHeEECC
Confidence 45899999999999955
No 432
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=39.83 E-value=43 Score=35.60 Aligned_cols=46 Identities=13% Similarity=0.253 Sum_probs=38.7
Q ss_pred ceEEEeecCCCchhHHh-------------------hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 673 PYIITKRCKGKMFAQLR-------------------DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~-------------------~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
+|+||++|.|..+.+.. ..|++.....++.++...++.||...+-+
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH 155 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIH 155 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 69999999997777665 35889999999999999999999875444
No 433
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=39.73 E-value=12 Score=39.67 Aligned_cols=17 Identities=18% Similarity=0.391 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 129 ~~iiH~dlkp~Nil~~~ 145 (290)
T cd07862 129 HRVVHRDLKPQNILVTS 145 (290)
T ss_pred CCeeeCCCCHHHEEEcC
Confidence 34899999999999965
No 434
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=39.72 E-value=35 Score=36.40 Aligned_cols=48 Identities=15% Similarity=-0.014 Sum_probs=39.1
Q ss_pred CCceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
.-+||||++|+| .+.++.. .|+++....++.++.+.|..||..-..+.
T Consensus 79 ~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 130 (293)
T cd07843 79 DKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHR 130 (293)
T ss_pred CcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 379999999998 4544432 48999999999999999999998865554
No 435
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=39.69 E-value=38 Score=37.05 Aligned_cols=45 Identities=13% Similarity=0.041 Sum_probs=38.3
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
..||||++|+|..+.+.. ..+++.+...++.++.+.|..||...+
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 122 (323)
T cd05616 75 RLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGI 122 (323)
T ss_pred EEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 689999999987766543 368899999999999999999998754
No 436
>PF02311 AraC_binding: AraC-like ligand binding domain; InterPro: IPR003313 This entry defines the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC. The crystal structure of the arabinose-binding and dimerization domain of the Escherichia coli gene regulatory protein AraC was determined in the presence and absence of L-arabinose. The arabinose-bound molecule shows that the protein adopts an unusual fold, binding sugar within a beta barrel and completely burying the arabinose with the amino-terminal arm of the protein. Dimer contacts in the presence of arabinose are mediated by an antiparallel coiled-coil. In the uncomplexed protein, the amino-terminal arm is disordered, uncovering the sugar-binding pocket and allowing it to serve as an oligomerization interface [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 1XJA_B 2ARA_A 2AAC_B 2ARC_A.
Probab=39.69 E-value=43 Score=30.91 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=18.3
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
-+..++|||+++||++=.|.....+.
T Consensus 41 ~~~~l~~g~~~li~p~~~H~~~~~~~ 66 (136)
T PF02311_consen 41 QEYPLKPGDLFLIPPGQPHSYYPDSN 66 (136)
T ss_dssp EEEEE-TT-EEEE-TTS-EEEEE-TT
T ss_pred EEEEEECCEEEEecCCccEEEecCCC
Confidence 45779999999999999999999883
No 437
>PHA03209 serine/threonine kinase US3; Provisional
Probab=39.62 E-value=13 Score=41.63 Aligned_cols=17 Identities=24% Similarity=0.573 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-+||+||.|+||++..
T Consensus 176 ~~ivHrDlkp~Nill~~ 192 (357)
T PHA03209 176 QRIIHRDVKTENIFIND 192 (357)
T ss_pred CCeecCCCCHHHEEECC
Confidence 35899999999999966
No 438
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=39.45 E-value=15 Score=39.65 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=14.5
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 127 ~~ivHrDlkp~Nil~~~ 143 (317)
T cd07868 127 NWVLHRDLKPANILVMG 143 (317)
T ss_pred CCEEcCCCCHHHEEEec
Confidence 34899999999999953
No 439
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=39.41 E-value=39 Score=37.02 Aligned_cols=47 Identities=11% Similarity=-0.065 Sum_probs=40.1
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||++|+|..+.+.. ..++++....++.+|.+.|+.||...+.+
T Consensus 70 ~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05592 70 HLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIY 119 (316)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 689999999998876654 36899999999999999999999976544
No 440
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=39.38 E-value=15 Score=44.62 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
..+||+||+|+||++..
T Consensus 274 ~gIiHRDLKP~NILl~~ 290 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSE 290 (566)
T ss_pred CCEEeCcCCHHHEEEeC
Confidence 35999999999999964
No 441
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=39.37 E-value=18 Score=45.35 Aligned_cols=73 Identities=21% Similarity=0.170 Sum_probs=42.8
Q ss_pred CCCCceEeccccCCceeeeccc-cccCCCCCCCCCCCccC---CCCCCCCC--cCcCcceeeeeeee-cCCCCCc---ch
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCC-ASSRSNGNAADTGPMVN---GSINGYDE--FGEAKSWHCSHIID-FSNLSIG---KC 879 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~w~~~~i~D-F~d~~~G---d~ 879 (912)
+.+|-+||+||+-||||+.-.. ..-|+=|+++....... +-..+.+. .-+--.+|.=-+|| |+.+.|| |.
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 5688899999999999997632 22256666655333211 11111111 01223577777888 4778887 55
Q ss_pred hhh
Q 002526 880 FLL 882 (912)
Q Consensus 880 ~~~ 882 (912)
|-|
T Consensus 242 WAL 244 (738)
T KOG1989|consen 242 WAL 244 (738)
T ss_pred HHH
Confidence 654
No 442
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=39.35 E-value=45 Score=35.15 Aligned_cols=47 Identities=13% Similarity=0.079 Sum_probs=39.9
Q ss_pred ceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 673 PYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 673 pYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
+||||.+|+|..+..+.. .+++++...++.++.+.|+.||...+.+.
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 124 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHR 124 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 799999999987776553 48899999999999999999998765544
No 443
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=39.25 E-value=1.1e+02 Score=33.06 Aligned_cols=47 Identities=11% Similarity=0.061 Sum_probs=36.9
Q ss_pred CceEEEeecCCCchhHHh-----------hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----------DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----------~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.++.|..+.-+. ..+++.....++.++.+.|..||...+-+
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH 131 (317)
T cd07867 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLH 131 (317)
T ss_pred eEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 579999999985444332 14888999999999999999999876443
No 444
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=39.12 E-value=16 Score=38.29 Aligned_cols=29 Identities=21% Similarity=0.402 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCCC
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSI 876 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~~ 876 (912)
++|+||.|+||++.. ...+. |.|||-+..
T Consensus 133 i~H~dlkp~Nil~~~--------------------------------~~~~k-l~Dfg~~~~ 161 (272)
T cd05075 133 FIHRDLAARNCMLNE--------------------------------NMNVC-VADFGLSKK 161 (272)
T ss_pred eeccccchhheEEcC--------------------------------CCCEE-ECCCCcccc
No 445
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=38.87 E-value=21 Score=39.68 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=16.7
Q ss_pred CCCceEeccccCCceeeec
Q 002526 811 KPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 811 ~~~~~iH~d~m~~ni~~~~ 829 (912)
+.|.+.|+||+|+||+...
T Consensus 146 ~~~~yAH~DiKP~NILls~ 164 (302)
T KOG2345|consen 146 KEPPYAHRDIKPANILLSD 164 (302)
T ss_pred cCCcccccCCCcceeEecC
Confidence 5678999999999999965
No 446
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=38.59 E-value=21 Score=41.83 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecC
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFS 872 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~ 872 (912)
+||+||+|+|||+.... ..+.--.-.|=|||
T Consensus 130 IiHRDLKPQNiLLs~~~---------------------------~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 130 IIHRDLKPQNILLSTTA---------------------------RNDTSPVLKIADFG 160 (429)
T ss_pred eeeccCCcceEEeccCC---------------------------CCCCCceEEecccc
No 447
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=38.59 E-value=42 Score=36.69 Aligned_cols=46 Identities=11% Similarity=-0.039 Sum_probs=38.1
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||++|+|..+.... ..++++....++.++.+.|..||...+-
T Consensus 70 ~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 118 (321)
T cd05591 70 RLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVI 118 (321)
T ss_pred eEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 579999999997775433 2688999999999999999999987543
No 448
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=38.43 E-value=15 Score=39.58 Aligned_cols=17 Identities=18% Similarity=0.442 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
..++|+||.|+||++..
T Consensus 157 ~~ivH~dlkp~Nill~~ 173 (304)
T cd05096 157 LNFVHRDLATRNCLVGE 173 (304)
T ss_pred CCccccCcchhheEEcC
Confidence 34899999999999965
No 449
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=38.28 E-value=24 Score=43.90 Aligned_cols=32 Identities=22% Similarity=0.383 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecCCCC
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLS 875 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~d~~ 875 (912)
++|+||+|+||+.-+ +.| +=..-.|+|||=++
T Consensus 141 IvHRDlKP~NIvl~~-----------------------Ged------gq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 141 IVHRDLKPGNIVLQI-----------------------GED------GQSIYKLTDFGAAR 172 (732)
T ss_pred ceeccCCCCcEEEee-----------------------cCC------CceEEeeecccccc
No 450
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=38.20 E-value=44 Score=36.68 Aligned_cols=47 Identities=11% Similarity=-0.094 Sum_probs=39.9
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
..||||.+|+|..+.+... .+++.....+|.++.+.|..||...+-+
T Consensus 70 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05619 70 NLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVY 119 (316)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 6899999999977776653 5889999999999999999999876543
No 451
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=38.11 E-value=15 Score=41.61 Aligned_cols=17 Identities=29% Similarity=0.575 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 161 ~~IvHrDLKp~NILl~~ 177 (370)
T cd05621 161 MGLIHRDVKPDNMLLDK 177 (370)
T ss_pred CCeEecCCCHHHEEECC
Confidence 35899999999999954
No 452
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=38.10 E-value=82 Score=34.52 Aligned_cols=45 Identities=18% Similarity=0.074 Sum_probs=38.4
Q ss_pred CceEEEeecCCCchhHHhh-----cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-----~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
+.||||.+|.|-.+.++.. .+++.....++.++.+.|..||...+
T Consensus 73 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 122 (328)
T cd08226 73 WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY 122 (328)
T ss_pred ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 7899999999977777654 47888999999999999999998654
No 453
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=38.00 E-value=14 Score=40.51 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.5
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 116 ~ivHrDlkp~Nil~~~ 131 (316)
T cd05620 116 GIIYRDLKLDNVMLDR 131 (316)
T ss_pred CeEecCCCHHHeEECC
Confidence 5899999999999965
No 454
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=37.96 E-value=15 Score=41.01 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=15.0
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 145 ~~ivH~Dlkp~NIll~~ 161 (364)
T cd07875 145 AGIIHRDLKPSNIVVKS 161 (364)
T ss_pred CCeecCCCCHHHEEECC
Confidence 45899999999999965
No 455
>PTZ00036 glycogen synthase kinase; Provisional
Probab=37.90 E-value=1.1e+02 Score=35.68 Aligned_cols=46 Identities=15% Similarity=0.028 Sum_probs=37.1
Q ss_pred CCceEEEeecCCCchhHHh------hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 671 IWPYIITKRCKGKMFAQLR------DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~------~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
...||||.+|.|....-+. ..|+......++.++.+.|+.||..-+
T Consensus 140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I 191 (440)
T PTZ00036 140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI 191 (440)
T ss_pred eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 4678999999996444332 368899999999999999999998754
No 456
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=37.70 E-value=16 Score=39.10 Aligned_cols=16 Identities=13% Similarity=0.387 Sum_probs=14.0
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 122 ~iiH~dikp~Nill~~ 137 (285)
T cd05631 122 RIVYRDLKPENILLDD 137 (285)
T ss_pred CEEeCCCCHHHEEECC
Confidence 3799999999999965
No 457
>PTZ00284 protein kinase; Provisional
Probab=37.58 E-value=1.3e+02 Score=35.27 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=35.7
Q ss_pred CceEEEeecCCCchhHHhh--cCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRD--ALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~--~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
..||||.+|.|..+..+.. .|++.....++.++.+.|..||.
T Consensus 206 ~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~ 249 (467)
T PTZ00284 206 HMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHT 249 (467)
T ss_pred eEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5789999997766665654 68999999999999999999996
No 458
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=37.58 E-value=22 Score=40.83 Aligned_cols=20 Identities=30% Similarity=0.473 Sum_probs=17.2
Q ss_pred CCCCceEeccccCCceeeec
Q 002526 810 CKPCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~ 829 (912)
..+|.+||+||.+.|||...
T Consensus 193 ~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 193 GCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred CCCCCEecCCCCHHHeeECC
Confidence 35678999999999999954
No 459
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=37.31 E-value=1.9e+02 Score=30.12 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=36.4
Q ss_pred CceEEEeecCCCchhHHhh---------cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---------ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---------~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
=+|+++.++.|..+.+..- .|+......++.++...|+.||....-+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H 136 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIH 136 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 3678888888777654421 5788899999999999999999876433
No 460
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=36.98 E-value=51 Score=34.50 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=36.4
Q ss_pred CceEEEeecCCCchhHHhh-------cCCHHHHHHHHHHHHHHHHhhcc
Q 002526 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHL 713 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~-------~l~~~d~~~la~~lg~~~~~lH~ 713 (912)
=+|+||+++.|..+.++.. .+++..+..++.++.+.|..||.
T Consensus 83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 131 (269)
T cd08528 83 RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK 131 (269)
T ss_pred eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 3799999999988877642 57889999999999999999995
No 461
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=36.93 E-value=20 Score=39.29 Aligned_cols=19 Identities=16% Similarity=0.148 Sum_probs=15.7
Q ss_pred CceEEEeecCCCchhHHhh
Q 002526 672 WPYIITKRCKGKMFAQLRD 690 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~ 690 (912)
-.||||.+|+|-+|.+...
T Consensus 86 ~~~lv~ey~~~g~L~~~l~ 104 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLR 104 (338)
T ss_pred ceEEEEecCCCCcHHHHHH
Confidence 4699999999988877654
No 462
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=36.89 E-value=56 Score=34.26 Aligned_cols=48 Identities=15% Similarity=-0.001 Sum_probs=40.2
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
-.|+||+++.|..+++... .|++.....+++++.+.|..||...+.+.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHR 132 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence 4799999999988887643 58889999999999999999998765444
No 463
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=36.73 E-value=18 Score=39.68 Aligned_cols=17 Identities=12% Similarity=0.386 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.++||++..
T Consensus 115 ~givH~Dlkp~NIll~~ 131 (325)
T cd05604 115 INIVYRDLKPENILLDS 131 (325)
T ss_pred CCeeecCCCHHHeEECC
Confidence 35899999999999954
No 464
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=36.72 E-value=15 Score=39.69 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 122 ~~ivH~dlkp~Nill~~ 138 (303)
T cd07869 122 RYILHRDLKPQNLLISD 138 (303)
T ss_pred CCeecCCCCHHHEEECC
Confidence 34899999999999965
No 465
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=36.71 E-value=48 Score=36.33 Aligned_cols=46 Identities=11% Similarity=0.004 Sum_probs=38.7
Q ss_pred CceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCC
Q 002526 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCP 717 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~ 717 (912)
-.||||.+|.|..+.+... .++++....++.++.+.|..||..-+-
T Consensus 69 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iv 117 (323)
T cd05571 69 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVV 117 (323)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 5799999999977765543 689999999999999999999987543
No 466
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=36.69 E-value=18 Score=38.85 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=15.0
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
..++|+||.|+||++..
T Consensus 138 ~~ivH~dlkp~Nill~~ 154 (297)
T cd05089 138 KQFIHRDLAARNVLVGE 154 (297)
T ss_pred CCcccCcCCcceEEECC
Confidence 45899999999999965
No 467
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=36.37 E-value=17 Score=39.70 Aligned_cols=17 Identities=29% Similarity=0.653 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 121 ~~i~H~Dlkp~NIll~~ 137 (330)
T cd05601 121 MGYVHRDIKPENVLIDR 137 (330)
T ss_pred CCeEcccCchHheEECC
Confidence 45899999999999965
No 468
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=36.34 E-value=21 Score=37.35 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=15.1
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
..++|+||.|+||++..
T Consensus 122 ~~i~H~dl~p~Nil~~~ 138 (261)
T cd05068 122 QNYIHRDLAARNVLVGE 138 (261)
T ss_pred CCeeeccCCcceEEEcC
Confidence 35999999999999976
No 469
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=36.29 E-value=47 Score=36.65 Aligned_cols=45 Identities=13% Similarity=0.061 Sum_probs=38.5
Q ss_pred CceEEEeecCCCchhHHh---hcCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~---~~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-.||||++|+|..+.... ..|++.....++.++.+.|..||..-+
T Consensus 70 ~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i 117 (329)
T cd05618 70 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 117 (329)
T ss_pred EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 689999999997776543 268999999999999999999998754
No 470
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=36.27 E-value=17 Score=39.90 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=14.4
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.++||++..
T Consensus 116 givH~dikp~NIll~~ 131 (323)
T cd05575 116 NIIYRDLKPENILLDS 131 (323)
T ss_pred CeEeCCCCHHHeEECC
Confidence 4899999999999955
No 471
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=36.24 E-value=1e+02 Score=32.80 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=30.4
Q ss_pred ceEEEeecCCCch--hHHhh-cCCHHHHHHHHHHHHHHHHhh-ccc
Q 002526 673 PYIITKRCKGKMF--AQLRD-ALSGEDVLNLASFLGEQLRNL-HLL 714 (912)
Q Consensus 673 pYiv~~r~~G~~~--~~~~~-~l~~~d~~~la~~lg~~~~~l-H~l 714 (912)
.+|||+++.|..+ ..+.+ .++.++...+..++++.|+.+ |..
T Consensus 99 ~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 99 HVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred CEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4899999988533 23444 455667788889999999887 764
No 472
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=36.16 E-value=16 Score=39.96 Aligned_cols=17 Identities=24% Similarity=0.346 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 115 ~~ivHrDikp~Nill~~ 131 (321)
T cd05591 115 HGVIYRDLKLDNILLDA 131 (321)
T ss_pred CCeeccCCCHHHeEECC
Confidence 35899999999999954
No 473
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=36.01 E-value=17 Score=41.05 Aligned_cols=17 Identities=35% Similarity=0.667 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||+|+||++..
T Consensus 120 ~givHrDlKp~Nili~~ 136 (381)
T cd05626 120 MGFIHRDIKPDNILIDL 136 (381)
T ss_pred CCeeecCCcHHHEEECC
Confidence 45899999999999954
No 474
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=36.01 E-value=22 Score=43.47 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=18.5
Q ss_pred CCCCceEeccccCCceeeeccc
Q 002526 810 CKPCSWIHSDIMDDNVYMEPCC 831 (912)
Q Consensus 810 ~~~~~~iH~d~m~~ni~~~~~~ 831 (912)
+-.|-+||+||+=|||++-..+
T Consensus 161 s~~PPIIHRDLKCDNIFinG~~ 182 (632)
T KOG0584|consen 161 SQDPPIIHRDLKCDNIFVNGNL 182 (632)
T ss_pred cCCCCccccccccceEEEcCCc
Confidence 3578899999999999997644
No 475
>COG3450 Predicted enzyme of the cupin superfamily [General function prediction only]
Probab=35.96 E-value=28 Score=34.23 Aligned_cols=26 Identities=27% Similarity=0.327 Sum_probs=19.6
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLET 358 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLdd 358 (912)
--+.++|||.+|+|+||.=.=.-++.
T Consensus 82 e~v~~~aGD~~~~~~G~~g~W~V~Et 107 (116)
T COG3450 82 EPVEVRAGDSFVFPAGFKGTWEVLET 107 (116)
T ss_pred eEEEEcCCCEEEECCCCeEEEEEeee
Confidence 44679999999999999755444443
No 476
>COG1482 ManA Phosphomannose isomerase [Carbohydrate transport and metabolism]
Probab=35.94 E-value=37 Score=38.66 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=24.2
Q ss_pred EEEEcCCCEEEeCCCCceeeEeCCCcEEEee
Q 002526 334 ECTQLPGETIVVPSGWWHCILNLETTIAVTQ 364 (912)
Q Consensus 334 E~vLePGDvLFVPsGWWHqV~NLddSIAVn~ 364 (912)
.+.++|||.+|||+|-.|....- ..+=|-+
T Consensus 159 ~v~lkpGe~~fl~Agt~HA~~~G-~~lEvmq 188 (312)
T COG1482 159 RVKLKPGEAFFLPAGTPHAYLKG-LVLEVMQ 188 (312)
T ss_pred EEecCCCCEEEecCCCceeeccc-eEEEEEe
Confidence 47899999999999999998766 4444544
No 477
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=35.89 E-value=14 Score=40.47 Aligned_cols=16 Identities=25% Similarity=0.663 Sum_probs=14.2
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 121 ~ivH~dlkp~Nil~~~ 136 (333)
T cd05600 121 GYIHRDLKPENFLIDA 136 (333)
T ss_pred CccccCCCHHHEEECC
Confidence 4899999999999955
No 478
>PRK15131 mannose-6-phosphate isomerase; Provisional
Probab=35.87 E-value=37 Score=39.63 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=24.9
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCCCcEEEee
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLETTIAVTQ 364 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLddSIAVn~ 364 (912)
-.+.++|||++|||+|-.|....=. +|=|-+
T Consensus 237 N~v~l~pGeaifipAg~~HAyl~G~-~iEima 267 (389)
T PRK15131 237 NVVKLNPGEAMFLFAETPHAYLQGV-ALEVMA 267 (389)
T ss_pred eEEEeCCCCEEEeCCCCCeEEcCCe-EEEEEe
Confidence 3578999999999999999987644 555544
No 479
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=35.85 E-value=14 Score=41.02 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=15.0
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 142 ~~ivHrDlkp~NIl~~~ 158 (359)
T cd07876 142 AGIIHRDLKPSNIVVKS 158 (359)
T ss_pred CCcccCCCCHHHEEECC
Confidence 35899999999999965
No 480
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=35.75 E-value=19 Score=39.08 Aligned_cols=25 Identities=28% Similarity=0.461 Sum_probs=0.0
Q ss_pred eEeccccCCceeeeccccccCCCCCCCCCCCccCCCCCCCCCcCcCcceeeeeeeecC
Q 002526 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFS 872 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~DF~ 872 (912)
++|+||.++||++.. =....|.|||
T Consensus 130 iiH~dlkp~Nill~~---------------------------------~~~~kl~DfG 154 (316)
T cd05108 130 LVHRDLAARNVLVKT---------------------------------PQHVKITDFG 154 (316)
T ss_pred eeccccchhheEecC---------------------------------CCcEEEcccc
No 481
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=35.69 E-value=25 Score=41.44 Aligned_cols=16 Identities=19% Similarity=0.582 Sum_probs=14.1
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+|++|.||++.+
T Consensus 277 g~~H~D~hPgNilv~~ 292 (437)
T TIGR01982 277 GFFHADLHPGNIFVLK 292 (437)
T ss_pred CceeCCCCcccEEECC
Confidence 3799999999999955
No 482
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=35.68 E-value=45 Score=35.51 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=38.7
Q ss_pred CCceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
...|+||++|.|.....+.. .+++++...++.++.+.|..||....-+
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 142 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILH 142 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 47899999999854444433 5899999999999999999999885444
No 483
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=35.57 E-value=17 Score=40.10 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=14.3
Q ss_pred ceEeccccCCceeeec
Q 002526 814 SWIHSDIMDDNVYMEP 829 (912)
Q Consensus 814 ~~iH~d~m~~ni~~~~ 829 (912)
-++|+||.|+||++..
T Consensus 115 ~ivHrDikp~NIll~~ 130 (328)
T cd05593 115 KIVYRDLKLENLMLDK 130 (328)
T ss_pred CeEecccCHHHeEECC
Confidence 4899999999999955
No 484
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=35.56 E-value=16 Score=40.09 Aligned_cols=17 Identities=35% Similarity=0.706 Sum_probs=15.0
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 120 ~giiH~Dlkp~NIll~~ 136 (350)
T cd05573 120 LGFIHRDIKPDNILIDA 136 (350)
T ss_pred CCeeccCCCHHHeEECC
Confidence 56999999999999954
No 485
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=35.50 E-value=17 Score=39.77 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 115 ~~ivH~Dlkp~NIll~~ 131 (321)
T cd05603 115 LNIIYRDLKPENILLDS 131 (321)
T ss_pred CCeEeccCCHHHeEECC
Confidence 35899999999999965
No 486
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=35.37 E-value=29 Score=36.44 Aligned_cols=18 Identities=17% Similarity=0.455 Sum_probs=14.6
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
..-++|||+..-||++.+
T Consensus 125 ~~givHGDLs~~NIlv~~ 142 (188)
T PF01163_consen 125 KAGIVHGDLSEYNILVDD 142 (188)
T ss_dssp CTTEEESS-STTSEEEET
T ss_pred hcCceecCCChhhEEeec
Confidence 456899999999999966
No 487
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=35.36 E-value=53 Score=36.21 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=38.3
Q ss_pred CceEEEeecCCCchhHHhh----cCCHHHHHHHHHHHHHHHHhhcccCC
Q 002526 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLLPC 716 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~~----~l~~~d~~~la~~lg~~~~~lH~lp~ 716 (912)
-.||||.+|+|-.+.+... .|+++....++.++...|..||..-+
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i 123 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY 123 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5799999999988877653 58899999999999999999998753
No 488
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=35.30 E-value=54 Score=35.09 Aligned_cols=47 Identities=11% Similarity=-0.046 Sum_probs=39.3
Q ss_pred CceEEEeecCCCchhHHh-----hcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 002526 672 WPYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLPCPP 718 (912)
Q Consensus 672 WpYiv~~r~~G~~~~~~~-----~~l~~~d~~~la~~lg~~~~~lH~lp~~~ 718 (912)
-.|+||.+|.|..+.+.. ..+++.....++.++.+.|..||...+-+
T Consensus 74 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 125 (285)
T cd05631 74 ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVY 125 (285)
T ss_pred eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 579999999998886543 25889999999999999999999976544
No 489
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=35.29 E-value=18 Score=38.85 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 120 ~~i~H~dlkp~NIli~~ 136 (291)
T cd05612 120 KEIVYRDLKPENILLDK 136 (291)
T ss_pred CCeeecCCCHHHeEECC
Confidence 35899999999999955
No 490
>PF00908 dTDP_sugar_isom: dTDP-4-dehydrorhamnose 3,5-epimerase; InterPro: IPR000888 Deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-d-hexulose 3, 5-epimerase (RmlC, 5.1.3.13 from EC) is involved in the biosynthesis of dTDP-l-rhamnose, which is an essential component of the bacterial cell wall, converting dTDP-4-keto-6-deoxy-D-glucose to dTDP-4-keto-L-rhamnose. The crystal structure of RmlC from Methanobacterium thermoautotrophicum was determined in the presence and absence of a substrate analogue. RmlC is a homodimer comprising a central jelly roll motif, which extends in two directions into longer beta-sheets. Binding of dTDP is stabilised by ionic interactions to the phosphate group and by a combination of ionic and hydrophobic interactions with the base. The active site, which is located in the centre of the jelly roll, is formed by residues that are conserved in all known RmlC sequence homologues. The active site is lined with a number of charged residues and a number of residues with hydrogen-bonding potentials, which together comprise a potential network for substrate binding and catalysis. The active site is also lined with aromatic residues which provide favorable environments for the base moiety of dTDP and potentially for the sugar moiety of the substrate [].; GO: 0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity, 0009103 lipopolysaccharide biosynthetic process; PDB: 1EPZ_A 1EP0_A 1NXM_A 1NZC_D 2IXL_C 1NYW_B 2IXC_D 1PM7_B 1UPI_A 3RYK_B ....
Probab=35.29 E-value=60 Score=33.88 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=25.4
Q ss_pred CCEEEEEcCCC--EEEeCCCCceeeEeCCCcEEEee
Q 002526 331 KPIECTQLPGE--TIVVPSGWWHCILNLETTIAVTQ 364 (912)
Q Consensus 331 ~~~E~vLePGD--vLFVPsGWWHqV~NLddSIAVn~ 364 (912)
+-..++|.+++ .||||+|.+|-..++++.-.|..
T Consensus 94 ~~~~~~Ls~~n~~~l~IP~G~aHGf~~l~d~a~v~Y 129 (176)
T PF00908_consen 94 KWVSVELSAENPRQLYIPPGVAHGFQTLEDDAEVLY 129 (176)
T ss_dssp -EEEEEEETTT--EEEE-TTEEEEEEESSSEEEEEE
T ss_pred EEEEEEeCccccCEEEeCCcceeeEEeccCceEEEE
Confidence 34677887776 79999999999999998644443
No 491
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=35.28 E-value=23 Score=37.76 Aligned_cols=17 Identities=12% Similarity=0.421 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
..++|+||.|+||++..
T Consensus 128 ~~iiH~dlkp~nili~~ 144 (279)
T cd05111 128 HRMVHRNLAARNILLKS 144 (279)
T ss_pred CCEeccccCcceEEEcC
Confidence 34899999999999976
No 492
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=35.25 E-value=16 Score=39.58 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=15.0
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 123 ~~ivH~dlkp~Nill~~ 139 (309)
T cd07872 123 RKVLHRDLKPQNLLINE 139 (309)
T ss_pred CCeecCCCCHHHEEECC
Confidence 45899999999999965
No 493
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=35.11 E-value=17 Score=40.39 Aligned_cols=17 Identities=35% Similarity=0.696 Sum_probs=14.7
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 120 ~~ivH~Dlkp~NIl~~~ 136 (364)
T cd05599 120 LGYIHRDIKPDNLLLDA 136 (364)
T ss_pred CCeEeccCCHHHeEECC
Confidence 35899999999999955
No 494
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=35.06 E-value=63 Score=33.88 Aligned_cols=49 Identities=14% Similarity=-0.050 Sum_probs=41.6
Q ss_pred CCceEEEeecCCCchhHHhh---cCCHHHHHHHHHHHHHHHHhhcccCCCCC
Q 002526 671 IWPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLLPCPPF 719 (912)
Q Consensus 671 ~WpYiv~~r~~G~~~~~~~~---~l~~~d~~~la~~lg~~~~~lH~lp~~~~ 719 (912)
...|++|.++.|..+.+... .|++.....++.++.+.|..||.....+.
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~ 130 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHR 130 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 47899999999988877653 58899999999999999999998876543
No 495
>PF09372 PRANC: PRANC domain; InterPro: IPR018272 This presumed domain is found at the C terminus of a variety of Pox virus proteins. The PRANC (Pox proteins Repeats of ANkyrin, C-terminal) domain is also found on its own in some proteins []. The function of this domain is unknown, but it appears to be related to the F-box domain and may play a similar role.
Probab=34.94 E-value=36 Score=31.57 Aligned_cols=26 Identities=38% Similarity=0.542 Sum_probs=23.9
Q ss_pred CCCCCCCHHHHHHHHhcCCHHHHHHH
Q 002526 19 GDLKIIPDEIICSILEHLTPRDVGRL 44 (912)
Q Consensus 19 G~l~~LPDElLl~ILs~Ld~~dL~~L 44 (912)
..+..||.|+-..||++|+-.||..+
T Consensus 70 ~~w~~LP~EIk~~Il~~L~~~dL~~l 95 (97)
T PF09372_consen 70 NYWNILPIEIKYKILEYLSNKDLKKL 95 (97)
T ss_pred CchhhCCHHHHHHHHHcCCHHHHHHH
Confidence 56889999999999999999999876
No 496
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=34.81 E-value=18 Score=40.41 Aligned_cols=18 Identities=33% Similarity=0.645 Sum_probs=15.2
Q ss_pred CCceEeccccCCceeeec
Q 002526 812 PCSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 812 ~~~~iH~d~m~~ni~~~~ 829 (912)
..-++|+||.|+||++..
T Consensus 119 ~~givHrDLkp~NIli~~ 136 (360)
T cd05627 119 QLGFIHRDIKPDNLLLDA 136 (360)
T ss_pred HCCeEccCCCHHHEEECC
Confidence 346899999999999954
No 497
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=34.72 E-value=17 Score=40.25 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=14.8
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 138 ~givHrDikp~Nill~~ 154 (355)
T cd07874 138 AGIIHRDLKPSNIVVKS 154 (355)
T ss_pred CCcccCCCChHHEEECC
Confidence 35899999999999965
No 498
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=34.41 E-value=23 Score=42.34 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=13.6
Q ss_pred eEeccccCCceeeec
Q 002526 815 WIHSDIMDDNVYMEP 829 (912)
Q Consensus 815 ~iH~d~m~~ni~~~~ 829 (912)
+||+||+|.|+|+..
T Consensus 231 iiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 231 IIHRDIKPSNLLLSS 245 (576)
T ss_pred eeccccchhheEEcC
Confidence 699999999999955
No 499
>PRK15457 ethanolamine utilization protein EutQ; Provisional
Probab=34.32 E-value=52 Score=35.96 Aligned_cols=25 Identities=12% Similarity=0.085 Sum_probs=20.1
Q ss_pred EEEEEcCCCEEEeCCCCceeeEeCC
Q 002526 333 IECTQLPGETIVVPSGWWHCILNLE 357 (912)
Q Consensus 333 ~E~vLePGDvLFVPsGWWHqV~NLd 357 (912)
-+.++.|||++|||+|=.|+-.+.+
T Consensus 193 ~t~~l~pGDvlfIPkGs~~hf~tp~ 217 (233)
T PRK15457 193 ETMIAKAGDVMFIPKGSSIEFGTPS 217 (233)
T ss_pred EEEEeCCCcEEEECCCCeEEecCCC
Confidence 4577999999999999996664443
No 500
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=34.20 E-value=15 Score=39.36 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=14.9
Q ss_pred CceEeccccCCceeeec
Q 002526 813 CSWIHSDIMDDNVYMEP 829 (912)
Q Consensus 813 ~~~iH~d~m~~ni~~~~ 829 (912)
.-++|+||.|+||++..
T Consensus 122 ~~ivH~dlkp~Nil~~~ 138 (288)
T cd07871 122 RKILHRDLKPQNLLINE 138 (288)
T ss_pred CCcccCCCCHHHEEECC
Confidence 45899999999999965
Done!