BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002527
(912 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta
pdb|1BO1|B Chain B, Phosphatidylinositol Phosphate Kinase Type Ii Beta
Length = 416
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 633 FRDLRSRCCPSELAYIDSLSRCR--NWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFD 690
FR+LR R + Y +S++R N D++G + + F+ T D RF+IK + +
Sbjct: 103 FRNLRERFGIDDQDYQNSVTRSAPINSDSQG-RCGTRFLTTYDRRFVIKTVSSEDVAEMH 161
Query: 691 KFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERNIT- 749
Y +++ E GN T L + LG+Y++T+ G E MV+ F +T
Sbjct: 162 NILKKYHQFIVEC--HGN-TLLPQFLGMYRLTV----DGVET---YMVVTRNVFSHRLTV 211
Query: 750 -RQYDLKGALHARYNTTVDGSGDV--LLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTT 806
R+YDLKG+ AR + + + D+ D +F+N+ L+V +K+ + D
Sbjct: 212 HRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNE--GQKLHVGEESKKNFLEKLKRDVE 269
Query: 807 FLNSIDVMDYSLLVGVDSQRR 827
FL + +MDYSLLVG+ R
Sbjct: 270 FLAQLKIMDYSLLVGIHDVDR 290
>pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
pdb|2GK9|B Chain B, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
pdb|2GK9|C Chain C, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
pdb|2GK9|D Chain D, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii,
Gamma
Length = 392
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 16/193 (8%)
Query: 633 FRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKF 692
FR+LR R + Y+ SL+R +++G + F+ + D +IKE+ +
Sbjct: 79 FRNLRDRFGIDDQDYLVSLTRNPPSESEGSDGR--FLISYDRTLVIKEVSSEDIADMHSN 136
Query: 693 ALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFER-NITRQ 751
+Y +Y+ + GN T L + LG+Y+V++ S ++VM N+ R + R+
Sbjct: 137 LSNYHQYIVKC--HGN-TLLPQFLGMYRVSVDNEDSY------MLVMRNMFSHRLPVHRK 187
Query: 752 YDLKGALHARYNTTVDGSGDV--LLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLN 809
YDLKG+L +R + + ++ L D +F+N + +Y+ K+I + D FL
Sbjct: 188 YDLKGSLVSREASDKEKVKELPTLRDMDFLN--KNQKVYIGEEEKKIFLEKLKRDVEFLV 245
Query: 810 SIDVMDYSLLVGV 822
+ +MDYSLL+G+
Sbjct: 246 QLKIMDYSLLLGI 258
>pdb|2YBX|A Chain A, Crystal Structure Of Human
Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha
pdb|2YBX|B Chain B, Crystal Structure Of Human
Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha
Length = 394
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 633 FRDLRSRCCPSELAYIDSLSRCRNW-DAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDK 691
FR+LR R + + +SL+R + +S + F + D R+IIK I +
Sbjct: 87 FRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHN 146
Query: 692 FALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFER-NITR 750
Y +Y+ E T L + LG+Y++ + G E+ ++V N+ R ++ R
Sbjct: 147 ILKKYHQYIVECH---GITLLPQFLGMYRLNV----DGVEIY--VIVTRNVFSHRLSVYR 197
Query: 751 QYDLKGALHARYNTTVDGSGDV--LLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFL 808
+YDLKG+ AR + + + ++ L D +F+N+ +Y+ + K++ + D FL
Sbjct: 198 KYDLKGSTVAREASDKEKAKELPTLKDNDFINE--GQKIYIDDNNKKVFLEKLKKDVEFL 255
Query: 809 NSIDVMDYSLLVGVDSQRR 827
+ +MDYSLLVG+ R
Sbjct: 256 AQLKLMDYSLLVGIHDVER 274
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR+ +CG +DYL
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYL 174
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 199
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR+ +CG +DYL
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYL 199
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 190
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 175
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR+ +CG +DYL
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYL 177
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 176
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 173
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 173
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 176
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 176
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 173
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYL 173
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 177
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 172
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 176
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR+ +CG +DYL
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYL 176
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 170
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYL 177
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 793 AKRILQRAVWNDTTFLNS---IDVMDYSLLVGVDSQRRELVCGIIDYL 837
+KR++ R + + L S + + D+ V S RR +CG +DYL
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYL 173
>pdb|4GOP|C Chain C, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
pdb|4GOP|Z Chain Z, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
pdb|4GNX|C Chain C, Structure Of
pdb|4GNX|Z Chain Z, Structure Of
Length = 444
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 646 AYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEF-DSFDKF 692
A + S S R+W + G+ K F V LDD EIK T F D+ D+F
Sbjct: 20 ARVTSKSDIRHWSNQRGEGKLFSVNLLDDS---GEIKATGFNDAVDRF 64
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 387 DDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDLEKLNGWFW 446
D+ VQA L S +L D V QYLA++ + +PN K + + + NG+ W
Sbjct: 184 DNGVQATGALYSRSLTPDDDV--FQYLAHTYASRNPNMKKGDECKNKMNFPNGVTNGYSW 241
Query: 447 MPFSELQQIY 456
P Q Y
Sbjct: 242 YPLQGGMQDY 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,707,104
Number of Sequences: 62578
Number of extensions: 1033407
Number of successful extensions: 2298
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2289
Number of HSP's gapped (non-prelim): 31
length of query: 912
length of database: 14,973,337
effective HSP length: 108
effective length of query: 804
effective length of database: 8,214,913
effective search space: 6604790052
effective search space used: 6604790052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)