Query 002527
Match_columns 912
No_of_seqs 263 out of 753
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 01:47:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002527.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002527hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0230 Phosphatidylinositol-4 100.0 9E-165 2E-169 1472.4 46.7 807 6-893 782-1598(1598)
2 cd00139 PIPKc Phosphatidylinos 100.0 4.3E-72 9.4E-77 612.3 30.2 256 619-882 53-313 (313)
3 smart00330 PIPKc Phosphatidyli 100.0 2.6E-70 5.5E-75 605.1 28.6 255 618-881 25-342 (342)
4 COG5253 MSS4 Phosphatidylinosi 100.0 5.4E-67 1.2E-71 577.3 12.6 273 615-892 328-607 (612)
5 KOG0229 Phosphatidylinositol-4 100.0 6.8E-65 1.5E-69 559.3 23.7 318 537-882 29-420 (420)
6 PLN03185 phosphatidylinositol 100.0 5E-61 1.1E-65 568.8 28.8 316 535-882 333-765 (765)
7 PF01504 PIP5K: Phosphatidylin 100.0 1.8E-60 4E-65 508.5 19.5 222 650-881 2-252 (252)
8 KOG0230 Phosphatidylinositol-4 93.3 0.066 1.4E-06 69.0 3.8 99 15-128 659-757 (1598)
9 PLN02667 inositol polyphosphat 56.7 18 0.00039 40.5 5.4 70 671-755 23-99 (286)
10 COG1997 RPL43A Ribosomal prote 49.8 14 0.00029 34.4 2.5 42 10-81 33-74 (89)
11 COG1779 C4-type Zn-finger prot 34.7 32 0.00068 36.6 2.8 44 6-69 8-52 (201)
12 PF06296 DUF1044: Protein of u 33.7 1.7E+02 0.0036 29.0 7.4 76 627-702 3-106 (120)
13 PF12226 Astro_capsid_p: Turke 30.0 30 0.00065 35.9 1.7 53 624-682 101-156 (230)
14 PF01636 APH: Phosphotransfera 27.7 2.5E+02 0.0055 28.3 8.1 71 660-742 6-77 (239)
15 COG5211 SSU72 RNA polymerase I 24.7 1.9E+02 0.0041 30.0 6.1 60 166-225 110-180 (197)
16 PF10891 DUF2719: Protein of u 24.1 24 0.00053 32.1 -0.2 23 61-97 23-45 (81)
17 cd06621 PKc_MAPKK_Pek1_like Ca 23.1 4.6E+02 0.0099 28.0 9.4 71 660-742 10-83 (287)
18 PF08772 NOB1_Zn_bind: Nin one 22.7 35 0.00075 30.8 0.5 32 12-43 24-55 (73)
19 PF07450 HycH: Formate hydroge 22.1 43 0.00093 33.5 1.1 22 811-839 24-45 (131)
20 PF10498 IFT57: Intra-flagella 21.4 1.7E+02 0.0036 34.1 5.8 50 139-188 200-251 (359)
21 PRK15084 formate hydrogenlyase 20.3 46 0.00099 33.3 0.9 22 811-839 26-47 (133)
No 1
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9e-165 Score=1472.37 Aligned_cols=807 Identities=42% Similarity=0.676 Sum_probs=602.5
Q ss_pred ccccccCCCCCCCCCCccccceeeeecCceEEEEEEeCCCccCCCCCCCCcEEEeecCCcCcCCCCCCCCCceeeccccc
Q 002527 6 NCNILQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAA 85 (912)
Q Consensus 6 ~~~~~q~~~C~sC~~pm~~Hvr~YvH~~g~ltI~v~~l~~~~~lpGe~~gkI~MWs~C~~C~~~~g~p~~Tp~vpMSd~a 85 (912)
+++|||+|.|++|.+||++|||||||++|||||.|++++.- +||+.+|+|||||||++|++. ||+|+||+|||+|
T Consensus 782 ~~~f~~~~~C~sC~~~~laHv~~yvh~~g~l~I~v~~~~e~--l~~e~~~kI~~w~~ClkC~~~---~~sT~rv~~Sdaa 856 (1598)
T KOG0230|consen 782 DYLFDQRYMCPSCNEPMLAHVRCYVHGNGSLTISVKKLPEL--LPGEQKGKIWMWSRCLKCNRF---PPSTRRVVMSDAA 856 (1598)
T ss_pred HHHhcccccCccccchHHHHHHHHhhccCceEEEeeccccc--cccccCceEEEEeccccCCCC---CCCcceeEcchhh
Confidence 46999999999999999999999999999999999999865 999999999999999999997 9999999999999
Q ss_pred cccccccchhhccccCcccCCCCCCCCCcccccccccccCCeEEEEEeceeeeeEeecCCceeEeecchhHHHHHHHHHH
Q 002527 86 CGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNV 165 (912)
Q Consensus 86 w~lSFGKfLELsF~~h~~~~R~~~CgHslhrDhlryFg~~~mVA~F~YspI~v~ev~lPp~~l~f~~~~~~~l~~E~~~v 165 (912)
|+|||||||||+||+|++++|+++|||+||||||||||||+|||+|+|++|++|+|++||.+|+|++.+++|+++|+++|
T Consensus 857 w~lSfgKfLEl~fs~~a~~~R~~~C~Hsl~rD~L~ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~~~~~~~~~~e~k~v 936 (1598)
T KOG0230|consen 857 WGLSFGKFLELSFSNHATANRVASCGHSLHRDCLRFFGFGNMVACFRYSPIEVYEVDLPPSKLEFNHIQQEWLQEEIKEV 936 (1598)
T ss_pred HhhhHHHHHHhhhccccccccccCCcchhhhhhhhhcccCCceeeeeeccceeEEEeCChhhcccchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999966669999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhHHHHHH
Q 002527 166 YTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWE 245 (912)
Q Consensus 166 ~~k~~~~f~~V~~rL~~i~~d~~~~~~~~~~~~~~i~el~~lL~~e~~~f~~~l~~~~~~~~~~~~~~~~iL~lN~l~r~ 245 (912)
..||+.+|++|.++|.+|+.+.++ ...|++|+.+|++|+.+|++.|+.++.+....++..+++|.||++||.
T Consensus 937 ~~k~~~~~n~v~~~l~~i~~~~~~--------~~~i~~l~~~l~~e~~~f~~~l~~~~~~~~~~~~~s~d~l~l~~~rr~ 1008 (1598)
T KOG0230|consen 937 IEKGEELYNEVLERLSRIAEKDEN--------RPLIQELKELLKHEKKEFKQNLQPIFTLEVDDGQLSHDILALNRDRRA 1008 (1598)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccc--------cchhhhhhhhhhhhHHHHHHhhhhhhhhccccCcchhhHHHHHHHHHH
Confidence 999999999999999999998322 357899999999999999999999999988889999999999999999
Q ss_pred HHHhhhhhhHHHhhccCCCCCccccCCCCCCCCCccccccCCCcCCCCCCCCCcccCC--CCCCccCCCCCcccCCcchh
Q 002527 246 LLIESCIWDRRLHSLLLPDPTVVITGATEKPGPEQTKVKMDGTTAKGNEVPEPEVDSG--NGDNVSNNFGNLEVLPDVAA 323 (912)
Q Consensus 246 Ll~~~~~Wd~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 323 (912)
|++.++.||.||+.+....+.+ ++ +.++.+..-|.++......|+.+.. .+..+. .++ .
T Consensus 1009 l~~~s~~w~~~l~s~~~~~k~~--~~-------~~~~~~~~~~~~~~~~~r~p~~~k~~~~~~~~~-~~~---------s 1069 (1598)
T KOG0230|consen 1009 LLASSYLWDERLISLSKSLKLE--SS-------KDTKPKESETNSTAKRKRSPEPQKGVDEDSFLT-DSS---------S 1069 (1598)
T ss_pred HHhhhccccccchhhhhhhccc--cc-------cccccccccccCccccccCchhhcccccccccc-ccc---------c
Confidence 9999999999999876544411 11 0000000111111111112221111 001000 000 0
Q ss_pred hhhhhcccccCCCCCCCCCCcccccccccccccccc---cccCCCcccccc-ccccccccccccCCCCCccccccccccc
Q 002527 324 EADELVVKEIPIDGPDRESGERDHKKTTVLKDVETS---IASDLSSTSLAN-EDSMVRSNVSDYLSGDDNVQAGKFLMSE 399 (912)
Q Consensus 324 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (912)
..+......+|...+....+........+.++.+.+ .++......++. .+.+....+...+.++ ..+ +
T Consensus 1070 ~~~~~~~~~lp~~~~s~~~d~~~~~~~~~~~~~~s~~~~~~~v~n~~s~~~~~~~~~~~~l~~~~~g~----r~~---~- 1141 (1598)
T KOG0230|consen 1070 DVSSLEHLNLPLPEDSNSTDTGLSGPSEVLEDNESIDEMLGSVRNTYSLANKVRKILKQILDSATIGN----RAN---P- 1141 (1598)
T ss_pred ccCccccccCCCCCcccccchhccCcccccccccchhhcccccccccchhhHHHHHHHHhcccccccc----ccc---C-
Confidence 000000001111000000000000000001110000 000000000000 0000101110001110 000 0
Q ss_pred ccccccccCccccccCCCCccCCCCCCCccccccccchhhhccCcccCCchHHHH-HHHHhhhcCcCCccccccCCCCCC
Q 002527 400 NLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDLEKLNGWFWMPFSELQQ-IYMKDLQRGFVPKFECVSRYTPEH 478 (912)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~k~~~~~~l~~~~~~~~~~p~~ 478 (912)
...|........ +.. ..+..++. .-.+...|++.||.++++ ...++.+.+ ..+........|.+
T Consensus 1142 -----~~~P~s~~~~~~----~~~--~~~~~~~~---~e~~~~~~~e~~~~~~~~~~~~~e~~ln-s~~~~~~~~~~~k~ 1206 (1598)
T KOG0230|consen 1142 -----KSSPFSGQDHST----DLP--LESNPIHV---LEKELSSWIEDPLTNMYYREATKELSLN-SQKNSAETKEPPKY 1206 (1598)
T ss_pred -----CCCCCchhhhcc----ccc--cccCCccc---cccccHHHHhhhhhhHhHHHHHHHHHhh-cchhhcccccCCcC
Confidence 011111000000 000 00011111 112567899999999987 555554332 22222233457888
Q ss_pred CchhhhhhhccCcccccccCCCCccccccCCCchhHHHHHhhccCCCccccccccCCCCCCCCccccccccccccccccc
Q 002527 479 LPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTRIPT 558 (912)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~v~V~edEpSSiIAyaL~s~ey~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 558 (912)
+++......++++||++|++.++.+++||||||+|+|||||++.+|..... .+|..+.. ..+ ++..++..
T Consensus 1207 ~~s~~~s~~~~~~rLl~p~~~ndl~vp~~edpp~s~ia~al~s~~~~~q~~--------~p~~sis~-~~S-~~~~~~s~ 1276 (1598)
T KOG0230|consen 1207 PSSESESEPESSSRLLLPLGLNDLVVPVYEDPPPSLIAYALSSKERINQES--------SPGLSISF-SLS-NLQGRLSK 1276 (1598)
T ss_pred cccccccccccccceeccccCCcccCCcccCCCchhhhhhhcchhhccCCC--------CCCccccc-ccc-ccccchhh
Confidence 877666677899999999999999999999999999999999966654221 11211110 000 00000000
Q ss_pred ccc-cccccCCCCCCcccccccccCccccccccccccccccccCCCCCCCCceeecccccCCCcceEEEEecHHHHHHHH
Q 002527 559 MAS-SLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLR 637 (912)
Q Consensus 559 ~~~-~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~y~p~~F~~LR 637 (912)
... ..|. ..+.+... + . .+... ..+.++++. .+..+++++.++.|+.+|+|+||||++|++||
T Consensus 1277 ~~e~~~~~-~~sl~~s~----l--~-----~s~~~---~~e~l~~~~-~~~~~h~~~~f~egk~k~svk~~yAe~F~~LR 1340 (1598)
T KOG0230|consen 1277 ISEFDDTK-SESLDNSG----L--E-----SSSYR---RGENLQKSK-LETRTHLEYQFSEGKAKYSVKCYYAEQFRALR 1340 (1598)
T ss_pred hhhhhhhh-hccccccc----c--c-----hhhhc---chhhccccc-cccccceeeeccCCceEEEEEEEehhhHHHHH
Confidence 000 0000 00000000 0 0 01111 223333331 23457777888899999999999999999999
Q ss_pred HHcCCChHHHHHHhccCCCCCCCCCCccceEEeecCCcEEEEeCCHHHHHHHHHHHHHHHHHHhhhcCCCCCcchheeee
Q 002527 638 SRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLG 717 (912)
Q Consensus 638 ~~~gise~dyi~SLs~~~~~~~sgGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~lp~Yf~yl~~~~~~~~~TlL~Ki~G 717 (912)
+.||.++++||+||+||.+|.++|||||++|++|.|+|||||+|++.|+++|++|||+||+||.+++++..||+||||||
T Consensus 1341 ~~c~~sEe~fIrSLsRc~~W~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlG 1420 (1598)
T KOG0230|consen 1341 KICCPSEEDFIRSLSRCVKWEAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILG 1420 (1598)
T ss_pred HhhCchHHHHHHHHhcCcccccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeccCCCceeEEEEEEEeecCCCcceeeeeecCCccccccccCCCCCCceeeccchhcccCCCCeeeChhhHHHH
Q 002527 718 IYQVTIRQPKSGKEMRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRIL 797 (912)
Q Consensus 718 ly~i~~k~~~~G~~~k~~fvVMeNlf~~~~I~~~YDLKGS~~~R~~~~~~~~~~vL~D~nf~~~~~~~pi~l~~~~k~~L 797 (912)
+|||.+|++++|++.|+++||||||||+++++|+||||||.|||++.++.+.+.||||+||+++++++||||++++|+.|
T Consensus 1421 iyqV~vK~~~sgke~K~DvmVMENLfY~r~vsRifDLKGS~RnR~v~~t~~~d~VLLDeNlVe~~~~sPIfV~~~sK~lL 1500 (1598)
T KOG0230|consen 1421 IYQVSVKSPKSGKETKMDVMVMENLFYGRKVSRIFDLKGSLRNRYVPTTSGADEVLLDENLVEMMWTSPIYVGSHSKRLL 1500 (1598)
T ss_pred eEEEEEecCCCCceeEeeeeeehhhhhccccceeeeccchhhhccCCCCCCCceEEecHHHHhhhhcCCeeehHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHhhCCCceeeeeeEEecCCceeEEeEEEeeeccchhhHHHHHHHHhc--CCCCCCCcccChhHHHHHHHH
Q 002527 798 QRAVWNDTTFLNSIDVMDYSLLVGVDSQRRELVCGIIDYLRQYTWDKHLETWVKSSL--VPKNVLPTVISPKDYKRRFRK 875 (912)
Q Consensus 798 ~~qL~~Dt~FL~s~nIMDYSLLVGi~~~~~~~~lGIID~L~~Yt~~KklE~~vK~~~--~~~~~~~Tvi~P~~Y~~RF~~ 875 (912)
.++|||||.||+++||||||||||||+++++||+|||||+||||||||||+|||..+ +|+|..||||+|++|++||++
T Consensus 1501 ~~aiwNDT~FLas~~VMDYSLLVGvD~e~~ELvlGIIDfiRtYTWDKkLESWVK~sGl~gpk~~~PTVVSP~qYK~RFRk 1580 (1598)
T KOG0230|consen 1501 RRAIWNDTSFLASINVMDYSLLVGVDDENNELVLGIIDFIRTYTWDKKLESWVKSSGLGGPKNKQPTVVSPEQYKTRFRK 1580 (1598)
T ss_pred HHHHhcchHHhhhcccceeeeEEEeeCCCCeEEEEehHhhhhhhhhhhhhhheeccccccCCCCCCceeCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996 789999999999999999999
Q ss_pred HHhcccccCCcccCCCCC
Q 002527 876 FMSTHFLSVPDHWCSPES 893 (912)
Q Consensus 876 ~m~~~F~~vpd~w~~~~~ 893 (912)
||+.||++|||+|+++|.
T Consensus 1581 AMd~YfL~VPD~Wtg~g~ 1598 (1598)
T KOG0230|consen 1581 AMDTYFLMVPDQWTGLGV 1598 (1598)
T ss_pred HHhheeeecCCcccCCCC
Confidence 999999999999999873
No 2
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs.
Probab=100.00 E-value=4.3e-72 Score=612.31 Aligned_cols=256 Identities=42% Similarity=0.719 Sum_probs=238.0
Q ss_pred CCcceEEEEecHHHHHHHHHHcCCChHHHHHHhccCCCCCCC-CCCccceEEeecCCcEEEEeCCHHHHHHHHHHHHHHH
Q 002527 619 GKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAK-GGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYF 697 (912)
Q Consensus 619 ~~~~f~~~~y~p~~F~~LR~~~gise~dyi~SLs~~~~~~~s-gGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~lp~Yf 697 (912)
....|+|++|+|.+|++||++|||++++|+.||+++..|..+ +|||||+||+|.|+|||||||+++|++.|+++||+||
T Consensus 53 ~~~~f~fk~Y~P~vF~~lR~~~gi~~~dy~~Sl~~~~~~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~ 132 (313)
T cd00139 53 LSADFKFKDYCPEVFRALRELFGIDEADYLRSLCRSPLWELSSGGKSGSFFYKTLDDRFIIKTVSHSEIESLLKFLPNYY 132 (313)
T ss_pred CCccEEEEEeCHHHHHHHHHHcCCCHHHHHHHhcCCCCccCCCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999988765 9999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCC-CcchheeeeEEEEeeeccCCCceeEEEEEEEeecCCC-cceeeeeecCCccccccccCCC--CCCcee
Q 002527 698 KYMNESFDSGN-QTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFE-RNITRQYDLKGALHARYNTTVD--GSGDVL 773 (912)
Q Consensus 698 ~yl~~~~~~~~-~TlL~Ki~Gly~i~~k~~~~G~~~k~~fvVMeNlf~~-~~I~~~YDLKGS~~~R~~~~~~--~~~~vL 773 (912)
+||.+ || +|||+||||+|+|++++ |...+++||||+|||++ ..|+++||||||+++|.+++.+ .+..||
T Consensus 133 ~~~~~----n~~~TLL~k~~Gl~~i~~~~---~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vl 205 (313)
T cd00139 133 EYITQ----NPQNTLLPKFFGLYRVKVKS---GTGKKVDFLVMENLFYSRLKIHRKYDLKGSTRNREASKKEKQKENPVL 205 (313)
T ss_pred HHHHh----CCCCcchhhheEEEEEEEcC---CCCceEEEEEEecCCCCCccceEEEECCCCCCCCCcCcccccCCcccc
Confidence 99998 68 99999999999998753 23357899999999998 7899999999999999998753 346799
Q ss_pred eccchhcccCCCCeeeChhhHHHHHHHHHhhHHHHhhCCCceeeeeeEEecCCceeEEeEEEeeeccchhhHHHHHHHHh
Q 002527 774 LDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQRRELVCGIIDYLRQYTWDKHLETWVKSS 853 (912)
Q Consensus 774 ~D~nf~~~~~~~pi~l~~~~k~~L~~qL~~Dt~FL~s~nIMDYSLLVGi~~~~~~~~lGIID~L~~Yt~~KklE~~vK~~ 853 (912)
||.||++.. ..+|+|+++.|+.|++||++||+||+++||||||||||||..+.+||+|||||||+|||+|++|+++|+.
T Consensus 206 KD~df~~~~-~~~i~l~~~~k~~l~~qL~~D~~FL~~~~iMDYSLLvGi~~~~~i~~~GIID~L~~y~~~Kk~E~~~K~~ 284 (313)
T cd00139 206 KDLNLLEMI-EQPLFVGEHSKKALLTQIKRDCEFLESLNIMDYSLLVGIHDIRLVLYLGIIDILRTYTWDKKLEHWVKSL 284 (313)
T ss_pred chhhhHhhc-CceEEeCHHHHHHHHHHHHHHHHHHHHCCCcccceEEEEecCCceEEEEEEeeeeeCCHHHHHHHHHHHh
Confidence 999999976 5699999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCcccChhHHHHHHHHHHhcccc
Q 002527 854 LVPKNVLPTVISPKDYKRRFRKFMSTHFL 882 (912)
Q Consensus 854 ~~~~~~~~Tvi~P~~Y~~RF~~~m~~~F~ 882 (912)
..+.+..||||+|++|++||++||++||+
T Consensus 285 ~~~~~~~iS~v~P~~Y~~RF~~fi~~~f~ 313 (313)
T cd00139 285 GHDGGKTPSVVSPEQYAKRFREFMDKYFL 313 (313)
T ss_pred ccCCCCCcceECHHHHHHHHHHHHHHhcC
Confidence 85554679999999999999999999985
No 3
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=100.00 E-value=2.6e-70 Score=605.13 Aligned_cols=255 Identities=38% Similarity=0.625 Sum_probs=234.2
Q ss_pred CCCcceEEEEecHHHHHHHHHHcCCChHHHHHHhccCCC-CCCCCCCccceEEeecCCcEEEEeCCHHHHHHHHHHHHHH
Q 002527 618 LGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRN-WDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHY 696 (912)
Q Consensus 618 ~~~~~f~~~~y~p~~F~~LR~~~gise~dyi~SLs~~~~-~~~sgGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~lp~Y 696 (912)
.+..+|+|++|+|++|++||+++|+++++|++||++|.. |.++||||||+||+|.|+|||||||+++|++.|+++||+|
T Consensus 25 ~~~~~~~~~~Y~P~~F~~lR~~~~i~~~~y~~Sl~~~~~~~~~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y 104 (342)
T smart00330 25 HGSADFKFKDYCPEVFRNLRELFGIDPADYLRSLCRSPPLELSSGGKSGSFFYLSLDDRFIIKTVSKSEIKSLLPMLPNY 104 (342)
T ss_pred CCCccEEEEEeCHHHHHHHHHHcCCCHHHHHHHhCCCCccccCCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999986 9999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCcchheeeeEEEEeeeccCCCceeEEEEEEEeecCC-CcceeeeeecCCccccccccCC-CCCCceee
Q 002527 697 FKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTF-ERNITRQYDLKGALHARYNTTV-DGSGDVLL 774 (912)
Q Consensus 697 f~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~G~~~k~~fvVMeNlf~-~~~I~~~YDLKGS~~~R~~~~~-~~~~~vL~ 774 (912)
|+||.+ ||+|||+||||+|+|+++ .|+..+++||||+|||+ +..|+++||||||+++|.+.+. .....|||
T Consensus 105 ~~~~~~----n~~SlL~ki~Gly~i~~~---~~~~~~~~fiVM~NlF~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~vlk 177 (342)
T smart00330 105 YEHIVQ----NPNTLLPKFFGLYRVKVK---GGTEKKIYFLVMENLFYSDLKVHRKYDLKGSTRGREADKKKVKELPVLK 177 (342)
T ss_pred HHHHHh----CCCcchhhhcEEEEEEEC---CCcceeEEEEEEecCCCCCCceeEEEECCCCCCCCCcCccccCCCCccc
Confidence 999987 689999999999999874 34356799999999999 5789999999999999999762 23467999
Q ss_pred ccchhcccCCCCeeeChhhHHHHHHHHHhhHHHHhhCCCceeeeeeEEecCCc---------------------------
Q 002527 775 DQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQRR--------------------------- 827 (912)
Q Consensus 775 D~nf~~~~~~~pi~l~~~~k~~L~~qL~~Dt~FL~s~nIMDYSLLVGi~~~~~--------------------------- 827 (912)
|.||.+. ...+|+|+++.|+.|++||++||+||+++||||||||||||..+.
T Consensus 178 D~df~~~-~~~~i~l~~~~k~~l~~ql~~D~~FL~~~~imDYSLLvGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (342)
T smart00330 178 DLDLVEM-WNQPIYVDPLAKKALLKQIKRDCEFLESLKIMDYSLLVGIHDIERGQREEIELPPVYGSDESPSSESSNGGK 256 (342)
T ss_pred ccchhhc-cCCeEEECHHHHHHHHHHHHHHHHHHHHccchhhhhhhccccccccchhcccccccccccccccccccccCC
Confidence 9999986 456999999999999999999999999999999999999996432
Q ss_pred ---------------------------------eeEEeEEEeeeccchhhHHHHHHHHhcCCCCCCCcccChhHHHHHHH
Q 002527 828 ---------------------------------ELVCGIIDYLRQYTWDKHLETWVKSSLVPKNVLPTVISPKDYKRRFR 874 (912)
Q Consensus 828 ---------------------------------~~~lGIID~L~~Yt~~KklE~~vK~~~~~~~~~~Tvi~P~~Y~~RF~ 874 (912)
+||||||||||+|||+|++|+++|+...+ +..||||+|++|++||+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vy~iGIID~Lq~Y~~~KklE~~~K~~~~~-~~~iS~V~P~~Y~~RF~ 335 (342)
T smart00330 257 APDITGNLLVSNSPDGDGPFGGIPARAIRARRVVLYLGIIDILQTYTWDKKLEHWVKSIGHD-GKTISVVHPEQYAKRFR 335 (342)
T ss_pred CccccccccccccccccccccccccccccCCceEEEEEEEEEEEeCCHhHHHHHHHHHhccC-CCCcceECHHHHHHHHH
Confidence 89999999999999999999999998743 45799999999999999
Q ss_pred HHHhccc
Q 002527 875 KFMSTHF 881 (912)
Q Consensus 875 ~~m~~~F 881 (912)
+||++||
T Consensus 336 ~fi~~~F 342 (342)
T smart00330 336 DFMDKYF 342 (342)
T ss_pred HHHHhhC
Confidence 9999998
No 4
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-67 Score=577.28 Aligned_cols=273 Identities=39% Similarity=0.591 Sum_probs=250.1
Q ss_pred cccCCCcceEEEEecHHHHHHHHHHcCCChHHHHHHhccCCCCCCCCCCccceEEeecCCcEEEEeCCHHHHHHHHHHHH
Q 002527 615 SKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFAL 694 (912)
Q Consensus 615 ~~~~~~~~f~~~~y~p~~F~~LR~~~gise~dyi~SLs~~~~~~~sgGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~lp 694 (912)
....|...|+|++|+|++|+.||++||+++. |++++++|..|...|||||||||||.|.|||||||.+.|+..|..++-
T Consensus 328 ~~~eg~~~~s~K~y~~e~Fr~lR~l~g~~~a-lvsl~sryil~E~~~GKSGSff~~trD~kfIiKti~hsE~~~~r~~~~ 406 (612)
T COG5253 328 QFEEGLYEFSCKDYFPEVFRELRALCGCDEA-LVSLLSRYILWESNGGKSGSFFLFTRDYKFIIKTISHSEHICFRPMIF 406 (612)
T ss_pred hccccceeeeHHhhCHHHHHHHHHHhCCcHH-HHHHHhhhheeccCCCcccceEEEeccchhhhhhhhhhhHHHHHHHHH
Confidence 3445667899999999999999999999885 999999999999999999999999999999999999999988877777
Q ss_pred HHHHHHhhhcCCCCCcchheeeeEEEEeeec-cCCCceeEEEEEEEeecCCCcceeeeeecCCccccccccCCCCCCcee
Q 002527 695 HYFKYMNESFDSGNQTCLAKVLGIYQVTIRQ-PKSGKEMRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVL 773 (912)
Q Consensus 695 ~Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~-~~~G~~~k~~fvVMeNlf~~~~I~~~YDLKGS~~~R~~~~~~~~~~vL 773 (912)
+|+.|+.. ||.|+||||||+|+|+++. ...++..|+||||||||||++.|+++||||||++||.+..+.....||
T Consensus 407 eY~~~V~~----np~T~l~ki~G~yrv~~~~s~~~~k~~K~~fiVMeNlf~~~~i~~ifDLKGS~~Nr~ve~~gk~~s~l 482 (612)
T COG5253 407 EYYVHVLF----NPLTLLCKIFGFYRVKSRSSISSSKSRKIYFIVMENLFYPHGIHRIFDLKGSMRNRHVERTGKSMSVL 482 (612)
T ss_pred HHHHHHHc----CchHHHHHHhceeEEeccccccccccceeEEEEecccCCCCCcceEEeccCchhhhhhhhhccccchh
Confidence 78888776 7889999999999998876 345667799999999999999999999999999999999888788899
Q ss_pred eccchhcccCCCCeeeChhhHHHHHHHHHhhHHHHhhCCCceeeeeeEEecCCceeEEe-EEEeeec-cchhhHHHHHHH
Q 002527 774 LDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQRRELVCG-IIDYLRQ-YTWDKHLETWVK 851 (912)
Q Consensus 774 ~D~nf~~~~~~~pi~l~~~~k~~L~~qL~~Dt~FL~s~nIMDYSLLVGi~~~~~~~~lG-IID~L~~-Yt~~KklE~~vK 851 (912)
+|.|.++.++.+|+.+....|+.|+.|||+|+.||+++||||||||||||..+.+..|| |||+.|+ |+|+|++|.|+|
T Consensus 483 ~~mndv~wI~es~~~~~g~~Kk~~~sqv~~Dv~fLsklniMDYSllVgi~~~~~~~~V~~I~d~i~t~~t~Dk~~~~gI~ 562 (612)
T COG5253 483 LDMNDVEWIRESPKIVFGLKKKLLLSQVWNDVLFLSKLNIMDYSLLVGIDDEREEASVGLIIDFIRTRMTGDKKLESGIK 562 (612)
T ss_pred ccchhHHHHHhCchhhhhHHHHHHHHHHHHHHHHHHHhCccceeEEEEeccchhhcchHHHHhhhccccccceeeeeehh
Confidence 99977777777888887799999999999999999999999999999999999999999 9999999 999999999999
Q ss_pred Hhc-CC---CCCCCcccChhHHHHHHHHHHhcccccCCcccCCCC
Q 002527 852 SSL-VP---KNVLPTVISPKDYKRRFRKFMSTHFLSVPDHWCSPE 892 (912)
Q Consensus 852 ~~~-~~---~~~~~Tvi~P~~Y~~RF~~~m~~~F~~vpd~w~~~~ 892 (912)
-.+ .+ +...||+|+|.+|++||++||+.|+..+||.|++.|
T Consensus 563 d~lt~~s~~k~~~~t~v~p~~y~nrf~~~~e~yi~~~p~~~~~~~ 607 (612)
T COG5253 563 DKLTVGSFTKRKEPTAVTPRQYKNRFRKAMEAYIDPFPDKKTQEG 607 (612)
T ss_pred hhhccceeeecccceecCHHHHHHHHHHhHHHhhhcccchhhhcc
Confidence 987 22 346799999999999999999999999999999876
No 5
>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-65 Score=559.31 Aligned_cols=318 Identities=31% Similarity=0.441 Sum_probs=255.6
Q ss_pred CCCCCcccccccccccccccccccccccccCCCCCCcccccccccCccccccccccccccccccCCCCCCCCceeecccc
Q 002527 537 GRDGDMAVKTIDSLRSLTRIPTMASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGISK 616 (912)
Q Consensus 537 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (912)
...|+.+.+.+.++..+..++.++. ++++.-+ +....+.....|+.....++...+++ -.|+ .
T Consensus 29 ~~~g~~v~~~~~~~~l~~~lqlGI~--~tVg~ls---------~v~~r~~~~~df~~~~k~~~~fp~~g----s~~t--p 91 (420)
T KOG0229|consen 29 VKQGEKVKKGHASYPLMLNLQLGIR--HTVGSLS---------SVPERDLPVMDFPDVEKAYSKFPSEG----SKFT--P 91 (420)
T ss_pred eccCceEecccccHHHHHHHHhcch--hhhcccc---------cCCcccCchhhCchhhhhheecCCCC----CccC--C
Confidence 3456777777888888887777754 3333221 11111222222222222322222221 1121 1
Q ss_pred cCCCcceEEEEecHHHHHHHHHHcCCChHHHHHHhccCCCCC--CCCCCccceEEeecCCcEEEEeCCHHHHHHHHHHHH
Q 002527 617 SLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWD--AKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFAL 694 (912)
Q Consensus 617 ~~~~~~f~~~~y~p~~F~~LR~~~gise~dyi~SLs~~~~~~--~sgGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~lp 694 (912)
++-...|++++|||.+||.||++|||+++||+.||++..... .++|||||+||.|.|+|||||||.++|++.|+++||
T Consensus 92 ~h~~~~Fk~KdYcP~vFR~lRelFgId~~DYl~Slc~~~~l~e~sspGksGS~Fy~S~DdrFiIKTv~~~E~~~l~~mLp 171 (420)
T KOG0229|consen 92 PHHSSDFKFKDYCPMVFRNLRELFGIDPADYLLSLCGNPPLRELSSPGKSGSFFYLSYDDRFIIKTVRKSEVKVLLKMLP 171 (420)
T ss_pred CCCccccchhhcChHHHHHHHHHhCCChHHHHHHHhcchhhhhccCCCCccceEEEecCceEEEEeccHHHHHHHHHHHH
Confidence 223568999999999999999999999999999999887764 677999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCcchheeeeEEEEeeeccCCCceeEEEEEEEeecCCCc-ceeeeeecCCccccccccCCC--CCCc
Q 002527 695 HYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFER-NITRQYDLKGALHARYNTTVD--GSGD 771 (912)
Q Consensus 695 ~Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~G~~~k~~fvVMeNlf~~~-~I~~~YDLKGS~~~R~~~~~~--~~~~ 771 (912)
.||+|+.++ ++.|||+||||+|+|++. +|+ +++||||+|+|..+ .||++||||||+++|.+++.+ .+..
T Consensus 172 ~Yy~~v~~~---~~~TLl~kf~Gly~vk~~---gg~--k~yfvVM~Nlf~~~~~iH~kyDLKGSt~~R~askke~~k~~p 243 (420)
T KOG0229|consen 172 GYYQHVVEQ---NNRTLLPKFFGLYRVKPD---GGK--KIYFVVMNNLFPSRLKVHRKYDLKGSTVGREASKKEKIKELP 243 (420)
T ss_pred HHHHHHHcc---CCceeehhhceeEEEeeC---CCc--eEEEEEecccCCCccceeEEeecCCCcccccccchhhccCCC
Confidence 999999984 666999999999999753 455 68999999999985 999999999999999998744 3467
Q ss_pred eeeccchhcccCCCCeeeChhhHHHHHHHHHhhHHHHhhCCCceeeeeeEEecC--------------------------
Q 002527 772 VLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQ-------------------------- 825 (912)
Q Consensus 772 vL~D~nf~~~~~~~pi~l~~~~k~~L~~qL~~Dt~FL~s~nIMDYSLLVGi~~~-------------------------- 825 (912)
+|||+||++. ...|+|++.+++.|++||++||+||++.+|||||||||||..
T Consensus 244 TlKDlDf~~~--~~~~~l~~~~~~~l~~ql~~Dce~Le~~~IMDYSLLvGiH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (420)
T KOG0229|consen 244 TLKDLDFLNE--GQKLYLGKEAKKALLKQLKRDCEFLESLKIMDYSLLVGIHDRDRGQAEKEELEPQEDESEREQRLSSA 321 (420)
T ss_pred ccccchhhcc--CceEecCHHHHHHHHHHHHHHHHHHHHhcchhhhheeeeeeccccccchhhcCCCCCccccccccccc
Confidence 9999999983 347999999999999999999999999999999999999741
Q ss_pred -------------------------------------------CceeEEeEEEeeeccchhhHHHHHHHHhcCCCCCCCc
Q 002527 826 -------------------------------------------RRELVCGIIDYLRQYTWDKHLETWVKSSLVPKNVLPT 862 (912)
Q Consensus 826 -------------------------------------------~~~~~lGIID~L~~Yt~~KklE~~vK~~~~~~~~~~T 862 (912)
+.+||+|||||||.|+..||+||++|+...+. ..+|
T Consensus 322 ~~~~~~~~~~~~~i~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~v~y~GIIDILq~Y~~~KK~EH~~Ksl~~d~-~tIS 400 (420)
T KOG0229|consen 322 SPEDVLTSTASPSIQLGANMPARAGEERVDRMEYAPAQNSGGYDVVLYIGIIDILQDYDIKKKLEHAYKSLQHDP-DTIS 400 (420)
T ss_pred cccccCCCCCcccccCCCCCCCccccccccccccccccccCcceEEEEEEeehhhhhcchhhHHHHHHhhhccCC-ceee
Confidence 12589999999999999999999999987543 4589
Q ss_pred ccChhHHHHHHHHHHhcccc
Q 002527 863 VISPKDYKRRFRKFMSTHFL 882 (912)
Q Consensus 863 vi~P~~Y~~RF~~~m~~~F~ 882 (912)
+|+|++|++||++||.+.|.
T Consensus 401 ~v~P~~Ys~RF~dFi~~~~~ 420 (420)
T KOG0229|consen 401 AVDPKFYAKRFLDFISNIFF 420 (420)
T ss_pred ccCHHHHHHHHHHHHHhhcC
Confidence 99999999999999998773
No 6
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=5e-61 Score=568.78 Aligned_cols=316 Identities=26% Similarity=0.368 Sum_probs=253.0
Q ss_pred CCCCCCCcccccccccccccccccccccccccCCCCCCcccccccccCccccccccccccccccccCCCCCCCCceeecc
Q 002527 535 DSGRDGDMAVKTIDSLRSLTRIPTMASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGI 614 (912)
Q Consensus 535 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (912)
+....|..+.+.+.++.++.+++.++. ++++..+. ....+....+|+.....+...++++ +...
T Consensus 333 ~~~~~g~~i~~gh~~~~l~~~~~~GIr--~sv~~~~~---------~~~~~l~~~DF~~~~~~~~~fp~~g-s~~t---- 396 (765)
T PLN03185 333 EIKRPGETIIKGHRSYDLMLSLQLGIR--YTVGKITP---------IQRREVRPSDFGPRASFWMNFPKAG-SQLT---- 396 (765)
T ss_pred hhcCCCcEEecCcCcHHHHHHHHHhHH--HHhccccc---------cCCccCChhhCcceEEEEEEcCccc-CccC----
Confidence 356789999999999999988766653 44433211 0111111222222222222122221 1110
Q ss_pred cccCCCcceEEEEecHHHHHHHHHHcCCChHHHHHHhccCCCC--CCCCCCccceEEeecCCcEEEEeCCHHHHHHHHHH
Q 002527 615 SKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNW--DAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKF 692 (912)
Q Consensus 615 ~~~~~~~~f~~~~y~p~~F~~LR~~~gise~dyi~SLs~~~~~--~~sgGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~ 692 (912)
.++....|+|++|+|.+|++||++|||++++|+.||+.+..+ ..++|||||+||+|.|+|||||||+++|+++|++|
T Consensus 397 -p~h~~~~fkfkdY~P~vFr~LR~~fgId~~dyl~Sl~~~~~l~el~S~GKSGS~Fy~S~D~rFiIKTI~k~E~~~l~~i 475 (765)
T PLN03185 397 -PSHQSEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVKVLLRM 475 (765)
T ss_pred -CCCccCceEEEEECHHHHHHHHHHhCCCHHHHHHhccCCccchhccCCCCcCCeEEEecCCcEEEEecCHHHHHHHHHH
Confidence 111235799999999999999999999999999999876554 57999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcchheeeeEEEEeeeccCCCceeEEEEEEEeecCCC-cceeeeeecCCccccccccCCC-CCC
Q 002527 693 ALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFE-RNITRQYDLKGALHARYNTTVD-GSG 770 (912)
Q Consensus 693 lp~Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~G~~~k~~fvVMeNlf~~-~~I~~~YDLKGS~~~R~~~~~~-~~~ 770 (912)
||+||+||.. +|+|||+||||+|+|++. .|+ +++||||+|||++ ..|+++||||||+++|.+...+ ..+
T Consensus 476 Lp~Y~~hv~~----n~~TLL~kf~Gl~~i~~~---~g~--k~~fvVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~~~~~~ 546 (765)
T PLN03185 476 LPDYHHHVKT----YENTLITKFFGLHRIKPS---SGQ--KFRFVVMGNMFCTELRIHRRFDLKGSSLGRSADKVEIDEN 546 (765)
T ss_pred HHHHHHHHhh----CCCcchhhheEEEEEEeC---CCc--EEEEEEEecCCCCCCccceEEECCCCCCCCCCccccccCC
Confidence 9999999987 799999999999999653 344 6899999999997 5899999999999999986543 346
Q ss_pred ceeeccchhcccCCCCeeeChhhHHHHHHHHHhhHHHHhhCCCceeeeeeEEecCC------------------------
Q 002527 771 DVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQR------------------------ 826 (912)
Q Consensus 771 ~vL~D~nf~~~~~~~pi~l~~~~k~~L~~qL~~Dt~FL~s~nIMDYSLLVGi~~~~------------------------ 826 (912)
.||||+||.. +|+|+++.++.|++||++||+||+++||||||||||||...
T Consensus 547 ~tlKDlD~~~-----~~~l~~~~k~~l~~qL~~D~~FL~~~~IMDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (765)
T PLN03185 547 TTLKDLDLNY-----SFYLEPSWRDALLRQIEIDSKFLEAQRIMDYSLLLGVHFRAPQHLRSLLPYSRSITADGLEVVAE 621 (765)
T ss_pred CeeeecCcCc-----eEeeCHHHHHHHHHHHHHHHHHHhHCcCeecceEEEEEecChhhhcccccccccccccccccccc
Confidence 7899999842 79999999999999999999999999999999999998210
Q ss_pred --------------------------------------------------------------------------------
Q 002527 827 -------------------------------------------------------------------------------- 826 (912)
Q Consensus 827 -------------------------------------------------------------------------------- 826 (912)
T Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~mpara~~~~~~~~~~ 701 (765)
T PLN03185 622 EDTIEDEELSYPEGLVLVPRGADDGSTVPGPHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAERIPGREDKE 701 (765)
T ss_pred cccccccccccccccccccccccccccCCCcccccccccccccCchhhhhccccccccchhhcccCchhhhccccccccc
Confidence
Q ss_pred ---------ceeEEeEEEeeeccchhhHHHHHHHHhcCCCCCCCcccChhHHHHHHHHHHhcccc
Q 002527 827 ---------RELVCGIIDYLRQYTWDKHLETWVKSSLVPKNVLPTVISPKDYKRRFRKFMSTHFL 882 (912)
Q Consensus 827 ---------~~~~lGIID~L~~Yt~~KklE~~vK~~~~~~~~~~Tvi~P~~Y~~RF~~~m~~~F~ 882 (912)
-+||+|||||||.|+..|+|||++|++..+. ..||+|+|+.|++||++||.+.|.
T Consensus 702 ~~~~~e~~d~~~~~giidilq~y~~~k~~eh~~k~~~~~~-~~is~v~p~~y~~rf~~f~~~~f~ 765 (765)
T PLN03185 702 KQSFHEVYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDS-LSISAVDPTFYSKRFLEFIQKVFP 765 (765)
T ss_pred ccccCcccceEEEEEEEEeecccchhHHHHHHHhhhccCC-CceeccChHHHHHHHHHHHHhhcC
Confidence 0378999999999999999999999987543 368999999999999999999884
No 7
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=100.00 E-value=1.8e-60 Score=508.49 Aligned_cols=222 Identities=36% Similarity=0.583 Sum_probs=155.9
Q ss_pred HhccC--CCCCCCCCCccceEEeecCCcEEEEeCCHHHHHHHHHHHHHHHHHHhhhcCCCCCcchheeeeEEEEeeeccC
Q 002527 650 SLSRC--RNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPK 727 (912)
Q Consensus 650 SLs~~--~~~~~sgGKSGs~F~~T~D~rFIIKtisk~E~~~f~~~lp~Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~ 727 (912)
||+.+ ..|..++|||||+||+|.|+|||||||+++|++.|+++||+||+||.+ +|+|||+||||+|+|...
T Consensus 2 sl~~~~~~~~~~s~GKSGs~F~~T~D~kfiiKti~~~E~~~l~~~lp~Y~~~~~~----~~~SlL~r~~Gl~~i~~~--- 74 (252)
T PF01504_consen 2 SLCNLSSLSEKSSGGKSGSFFFFTSDGKFIIKTISKSEFKFLLKILPAYFEHMSE----NPNSLLPRFYGLYSIKKS--- 74 (252)
T ss_dssp ---------ES---SSSSS-EEE-TTSSEEEEEE-HHHHHHHHHHHHHHHHHHHH----TTTSSS--EEEEEEE-EE---
T ss_pred CccccccccccCCCCCccCEEEEeCCCCEEEEeCCHHHHHHHHHHHHHHHHHHHh----CcCchHHHHHHHheeccc---
Confidence 56543 567899999999999999999999999999999999999999999998 688999999999999432
Q ss_pred CCceeEEEEEEEeecCCC-cceeeeeecCCccccccccCC--CCCCceeeccchhcccCCCCeeeChhhHHHHHHHHHhh
Q 002527 728 SGKEMRHDLMVMENLTFE-RNITRQYDLKGALHARYNTTV--DGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWND 804 (912)
Q Consensus 728 ~G~~~k~~fvVMeNlf~~-~~I~~~YDLKGS~~~R~~~~~--~~~~~vL~D~nf~~~~~~~pi~l~~~~k~~L~~qL~~D 804 (912)
.| ..+++||||+|||++ ..|+++||||||+++|.+.+. .....|+||.||.+.. .+|+|+++.++.|++||++|
T Consensus 75 ~~-~~~~~fvVM~N~f~~~~~i~~~yDLKGs~~~R~~~~~~~~~~~~~lkD~df~~~~--~~i~l~~~~~~~l~~ql~~D 151 (252)
T PF01504_consen 75 NG-KEKIYFVVMENLFYTPRNIHERYDLKGSTVGRKAKKKDREQTEPVLKDLDFIESK--RKIHLGPEQKEELLKQLERD 151 (252)
T ss_dssp TT--EEEEEEEEE-SS-SSS--SEEEEE--SSSSS-S-CHHHCSSS-EEEHHHHHHTT----SBS-SCHHHHHHHHHHHH
T ss_pred CC-ceeEEEEEECCCccCCcccceEEecCCcccCCCCCccccccccceeecccccccC--cEEEeChHHHHHHHHHHHHH
Confidence 34 457999999999998 799999999999999999762 2346799999999864 58999999999999999999
Q ss_pred HHHHhhCCCceeeeeeEEe------------------------cCCceeEEeEEEeeeccchhhHHHHHHHHhcCCCCCC
Q 002527 805 TTFLNSIDVMDYSLLVGVD------------------------SQRRELVCGIIDYLRQYTWDKHLETWVKSSLVPKNVL 860 (912)
Q Consensus 805 t~FL~s~nIMDYSLLVGi~------------------------~~~~~~~lGIID~L~~Yt~~KklE~~vK~~~~~~~~~ 860 (912)
|+||+++|||||||||||+ ..+.+||+|||||||+|||.|++|+++|+.+..++..
T Consensus 152 ~~FL~~~~imDYSLLvGi~~~~~~~~~~~~~~~~~~~~~~~s~~~~~vy~~GIID~L~~y~~~K~~E~~~K~~~~~~~~~ 231 (252)
T PF01504_consen 152 TEFLSSHNIMDYSLLVGIHNRDSNEEQENKSSFPSYAGGIMSEDGNEVYYLGIIDILQEYNWKKKLEHFFKSLIKCDGQD 231 (252)
T ss_dssp HHHHHHTTEES-EEEEEEEH---HHHHHH-H---TTTTTTCCCETTEEEEEEEE-S-EETT------------------S
T ss_pred HHHHHhccccccceeEeeeeccccccccccccccccccceeecCCCeEEEEEEehheeeccHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999 4578999999999999999999999999985323467
Q ss_pred CcccChhHHHHHHHHHHhccc
Q 002527 861 PTVISPKDYKRRFRKFMSTHF 881 (912)
Q Consensus 861 ~Tvi~P~~Y~~RF~~~m~~~F 881 (912)
+|||+|++|++||++||++||
T Consensus 232 iS~v~P~~Y~~RF~~~i~~~f 252 (252)
T PF01504_consen 232 ISCVPPEEYAERFIKFIESIF 252 (252)
T ss_dssp SS---HHHHHHHHHHHHHHH-
T ss_pred CcccCHHHHHHHHHHHHHHhC
Confidence 999999999999999999987
No 8
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=93.28 E-value=0.066 Score=69.01 Aligned_cols=99 Identities=10% Similarity=-0.184 Sum_probs=77.9
Q ss_pred CCCCCCCccccceeeeecCceEEEEEEeCCCccCCCCCCCCcEEEeecCCcCcCCCCCCCCCceeeccccccccccccch
Q 002527 15 CASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFL 94 (912)
Q Consensus 15 C~sC~~pm~~Hvr~YvH~~g~ltI~v~~l~~~~~lpGe~~gkI~MWs~C~~C~~~~g~p~~Tp~vpMSd~aw~lSFGKfL 94 (912)
|.-|+.||..|++.+.|..- .+.-+..+ + .++|. +.+|-|||+|..||.. +-. +|...+|.+.+|+++
T Consensus 659 ~~~~~~~~~~~lv~~~es~~-~~~~~s~~-~--~~~~l-~e~~~~~~~~~~~k~~------~~~-~~~~~~~~~~~~~~~ 726 (1598)
T KOG0230|consen 659 SSYSKGPKQNGLVPAHESVL-NDLHESTL-S--ILSKL-PETRSGTHEGNEDKGP------GLE-PELANNQNIQRPEET 726 (1598)
T ss_pred hhhcCchhhccccccccccc-cccccccc-c--ccccc-cchhcccchhccccCc------ccc-ccccccccccchhhh
Confidence 44588899999999999988 22222222 2 24554 5789999999999995 777 999999999999999
Q ss_pred hhccccCcccCCCCCCCCCcccccccccccCCeE
Q 002527 95 ELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMV 128 (912)
Q Consensus 95 ELsF~~h~~~~R~~~CgHslhrDhlryFg~~~mV 128 (912)
|-. ....+.+...|.|.+--=|.|+| +.++|
T Consensus 727 e~~--~s~~~~~~~~HQsilVl~ss~~~-~k~~~ 757 (1598)
T KOG0230|consen 727 EEQ--SSKDALDPSSHQSILVLFSSRSV-LKGSV 757 (1598)
T ss_pred hhh--hcccCCCccccceeEEEEeeeee-ccCCc
Confidence 988 44455666789999888888888 88876
No 9
>PLN02667 inositol polyphosphate multikinase
Probab=56.66 E-value=18 Score=40.51 Aligned_cols=70 Identities=19% Similarity=0.222 Sum_probs=44.1
Q ss_pred ecCCcEEEEeCC-----HHHHHHHHHHHHH--HHHHHhhhcCCCCCcchheeeeEEEEeeeccCCCceeEEEEEEEeecC
Q 002527 671 TLDDRFIIKEIK-----KTEFDSFDKFALH--YFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLT 743 (912)
Q Consensus 671 T~D~rFIIKtis-----k~E~~~f~~~lp~--Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~G~~~k~~fvVMeNlf 743 (912)
+.|+..|+|-+. ..|+++-..+... .-..+ .-++++++|...+... .|+ .+||||||.
T Consensus 23 ~~~~g~~~Kp~~~~~rg~rE~~FY~~~~~~~~~~~~L--------~~~~P~y~G~~~~~~~---~~~----~~i~LeDLt 87 (286)
T PLN02667 23 VDDSGRFYKPLQDDSRGEREAAFYESFSSDTRVPDHI--------RRFFPVFHGTQLVEAS---DGS----GLLVLEDLL 87 (286)
T ss_pred EcCCCcEEeccCCcccchHHHHHHHHHhccccchHHH--------HhhCcccceeEeeccC---CCc----eeEEehHHh
Confidence 347778899997 6888766654310 00111 2478999999887432 243 379999999
Q ss_pred CCcceeeeeecC
Q 002527 744 FERNITRQYDLK 755 (912)
Q Consensus 744 ~~~~I~~~YDLK 755 (912)
++..---+=|||
T Consensus 88 ~g~~~PcVlDlK 99 (286)
T PLN02667 88 AGYTKPCVMDVK 99 (286)
T ss_pred cCCCCCeEEEEE
Confidence 874333344554
No 10
>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]
Probab=49.77 E-value=14 Score=34.43 Aligned_cols=42 Identities=21% Similarity=0.498 Sum_probs=29.7
Q ss_pred ccCCCCCCCCCCccccceeeeecCceEEEEEEeCCCccCCCCCCCCcEEEeecCCcCcCCCCCCCCCceeec
Q 002527 10 LQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVI 81 (912)
Q Consensus 10 ~q~~~C~sC~~pm~~Hvr~YvH~~g~ltI~v~~l~~~~~lpGe~~gkI~MWs~C~~C~~~~g~p~~Tp~vpM 81 (912)
.+.|+||+|+.+- |++.. -.|| .|.+|.....=+-.||.++|
T Consensus 33 ~~~~~Cp~C~~~~-----------------VkR~a----------~GIW---~C~kCg~~fAGgay~P~t~~ 74 (89)
T COG1997 33 RAKHVCPFCGRTT-----------------VKRIA----------TGIW---KCRKCGAKFAGGAYTPVTPA 74 (89)
T ss_pred hcCCcCCCCCCcc-----------------eeeec----------cCeE---EcCCCCCeeccccccccchH
Confidence 4789999999872 23332 3388 58899987666667776665
No 11
>COG1779 C4-type Zn-finger protein [General function prediction only]
Probab=34.74 E-value=32 Score=36.62 Aligned_cols=44 Identities=27% Similarity=0.517 Sum_probs=32.1
Q ss_pred ccccccCCCCCCCCCCccccceeeeecCceEEEEEEeCCCccCCCCCCCCc-EEEeecCCcCcCC
Q 002527 6 NCNILQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGK-LWMWSRCGRCKTA 69 (912)
Q Consensus 6 ~~~~~q~~~C~sC~~pm~~Hvr~YvH~~g~ltI~v~~l~~~~~lpGe~~gk-I~MWs~C~~C~~~ 69 (912)
+..|.+.-.||.|+.-+..|.+.| . +| + -|. +.|-..|.+|.+-
T Consensus 8 ~~~~~~~~~CPvCg~~l~~~~~~~--------------~----IP-y-FG~V~i~t~~C~~CgYR 52 (201)
T COG1779 8 KEEFETRIDCPVCGGTLKAHMYLY--------------D----IP-Y-FGEVLISTGVCERCGYR 52 (201)
T ss_pred ceeeeeeecCCcccceeeEEEeee--------------c----CC-c-cceEEEEEEEccccCCc
Confidence 456778889999999888777654 2 34 1 244 6777899999985
No 12
>PF06296 DUF1044: Protein of unknown function (DUF1044); InterPro: IPR009387 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=33.67 E-value=1.7e+02 Score=28.98 Aligned_cols=76 Identities=18% Similarity=0.282 Sum_probs=53.6
Q ss_pred EecHHHHHHHHHHcCCChHHHHHHhccCC---------------CC-CCCCCCccc----eEEeecCCcEEEE-------
Q 002527 627 CLYANQFRDLRSRCCPSELAYIDSLSRCR---------------NW-DAKGGKSKS----FFVKTLDDRFIIK------- 679 (912)
Q Consensus 627 ~y~p~~F~~LR~~~gise~dyi~SLs~~~---------------~~-~~sgGKSGs----~F~~T~D~rFIIK------- 679 (912)
+|-...|.+.-+..++++.++...+..-. .| ....||||. .||...+.-|.|=
T Consensus 3 ifkt~~F~r~akk~~~sd~~L~~ai~el~~G~~~adLGGgv~K~Ria~~g~GKsGG~R~I~~~~~~~~~~~l~~y~K~~~ 82 (120)
T PF06296_consen 3 IFKTKWFKRWAKKEGLSDDDLCEAIEELEQGLIDADLGGGVRKKRIARKGKGKSGGYRVIYFFKQEDRIFFLYIYAKNEK 82 (120)
T ss_pred eeecHHHHHHHHHcCCCHHHHHHHHHHHHhCCcccchhccEEEEEeccCCCCCCCceEEEEEEEeCCEEEEEEEEccccc
Confidence 45568899999999999988866554321 12 235789985 3555555555542
Q ss_pred -eCCHHHHHHHHHHHHHHHHHHhh
Q 002527 680 -EIKKTEFDSFDKFALHYFKYMNE 702 (912)
Q Consensus 680 -tisk~E~~~f~~~lp~Yf~yl~~ 702 (912)
.|+..|++.|.+++..|..+-.+
T Consensus 83 ~nis~~El~~lk~la~~l~~~~~~ 106 (120)
T PF06296_consen 83 ANISDKELKALKKLAKELLNLSEE 106 (120)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCHH
Confidence 46789999999999999988655
No 13
>PF12226 Astro_capsid_p: Turkey astrovirus capsid protein; InterPro: IPR022027 This family of proteins is found in viruses. Proteins in this family are typically between 241 and 261 amino acids in length. These proteins are capsid proteins from various astrovirus strains. ; PDB: 3TS3_D.
Probab=30.00 E-value=30 Score=35.92 Aligned_cols=53 Identities=25% Similarity=0.348 Sum_probs=31.7
Q ss_pred EEEEecHHH---HHHHHHHcCCChHHHHHHhccCCCCCCCCCCccceEEeecCCcEEEEeCC
Q 002527 624 SVKCLYANQ---FRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIK 682 (912)
Q Consensus 624 ~~~~y~p~~---F~~LR~~~gise~dyi~SLs~~~~~~~sgGKSGs~F~~T~D~rFIIKtis 682 (912)
.++-|||.. =..|..+..+.|-|=+.|. ..+.|+-+++||.|.|+||||=--+
T Consensus 101 avkkYyP~TTnld~~lK~RlnL~EgDPViS~------GDt~GRRaALFYRtSdEr~ill~St 156 (230)
T PF12226_consen 101 AVKKYYPGTTNLDQQLKDRLNLTEGDPVISM------GDTTGRRAALFYRTSDERYILLFST 156 (230)
T ss_dssp TEEEB-GGG--S-HHHHHHHT--TT-EEEEE------EETT--EEEEEEETTTTEEEEEEEE
T ss_pred hhhhcCCCCccHHHHHHHhhccccCCceeee------cCCCCceEEEEEeccCceEEEEEcc
Confidence 577788832 2366666666554433333 3467889999999999999985443
No 14
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=27.72 E-value=2.5e+02 Score=28.31 Aligned_cols=71 Identities=20% Similarity=0.252 Sum_probs=40.2
Q ss_pred CCCCcc-ceEEeecCCcEEEEeCCHHHHHHHHHHHHHHHHHHhhhcCCCCCcchheeeeEEEEeeeccCCCceeEEEEEE
Q 002527 660 KGGKSK-SFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMV 738 (912)
Q Consensus 660 sgGKSG-s~F~~T~D~rFIIKtisk~E~~~f~~~lp~Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~G~~~k~~fvV 738 (912)
++|.++ .+.+.|.+++||||.........-+..--...+++.+. +. -.+++++.-... ......+++
T Consensus 6 ~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~---~~--pvP~~~~~~~~~-------~~~~~~~~~ 73 (239)
T PF01636_consen 6 SGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEH---GI--PVPRVLAFDTSD-------EFNGFPYLL 73 (239)
T ss_dssp EESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHT---TS--BS--EEEEEEET-------EETSEEEEE
T ss_pred CCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhc---CC--CCceEEeecccc-------cccccceEE
Confidence 567777 45555556699999998773222222223455777662 11 356777644331 111246899
Q ss_pred Eeec
Q 002527 739 MENL 742 (912)
Q Consensus 739 MeNl 742 (912)
|+.+
T Consensus 74 ~~~i 77 (239)
T PF01636_consen 74 MEYI 77 (239)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9998
No 15
>COG5211 SSU72 RNA polymerase II-interacting protein involved in transcription start site selection [Transcription]
Probab=24.67 E-value=1.9e+02 Score=30.04 Aligned_cols=60 Identities=13% Similarity=0.138 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHh-----------hcccccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002527 166 YTKGILLFSEVESSLKQ-----------IGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAK 225 (912)
Q Consensus 166 ~~k~~~~f~~V~~rL~~-----------i~~d~~~~~~~~~~~~~~i~el~~lL~~e~~~f~~~l~~~~~~ 225 (912)
.+=-+.+|++|.+-|-. |..|.....+++..+.+.|-||-++|.+++..|+..+..+..+
T Consensus 110 iTCEERcfdaicEdly~rg~~ln~~v~~iNvDIkD~~e~A~~G~kaILelvd~L~~~~e~lE~~~~sil~~ 180 (197)
T COG5211 110 ITCEERCFDAICEDLYARGPSLNQCVFMINVDIKDTPEDAIAGAKAILELVDVLAKEEERLEYAVDSILRR 180 (197)
T ss_pred EEehHHHHHHHHHHHHhcCccccccEEEEEeeccCChhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33446789999885543 3333333334455567889999999999998888887766555
No 16
>PF10891 DUF2719: Protein of unknown function (DUF2719); InterPro: IPR020122 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf56; it is a family of uncharacterised viral proteins.
Probab=24.09 E-value=24 Score=32.13 Aligned_cols=23 Identities=26% Similarity=0.647 Sum_probs=19.5
Q ss_pred ecCCcCcCCCCCCCCCceeeccccccccccccchhhc
Q 002527 61 SRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELS 97 (912)
Q Consensus 61 s~C~~C~~~~g~p~~Tp~vpMSd~aw~lSFGKfLELs 97 (912)
-+|.+|+.+ .||| +||..|++|.
T Consensus 23 V~C~~C~FV---------APmS-----IS~eeY~~LH 45 (81)
T PF10891_consen 23 VYCPKCYFV---------APMS-----ISFEEYIRLH 45 (81)
T ss_pred EEcccccee---------cccE-----eeHHHHHHHH
Confidence 389999998 6776 8999999985
No 17
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=23.10 E-value=4.6e+02 Score=27.96 Aligned_cols=71 Identities=15% Similarity=0.098 Sum_probs=38.5
Q ss_pred CCCCccceEEee---cCCcEEEEeCCHHHHHHHHHHHHHHHHHHhhhcCCCCCcchheeeeEEEEeeeccCCCceeEEEE
Q 002527 660 KGGKSKSFFVKT---LDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDL 736 (912)
Q Consensus 660 sgGKSGs~F~~T---~D~rFIIKtisk~E~~~f~~~lp~Yf~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~G~~~k~~f 736 (912)
+.|..|..|... .+..+++|.+..........-+.+-.+-+... .+.-+++++|.|...- + ...+
T Consensus 10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l----~h~~iv~~~~~~~~~~-----~---~~~~ 77 (287)
T cd06621 10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC----KSPYIVKYYGAFLDES-----S---SSIG 77 (287)
T ss_pred ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC----CCCCeeeeeeEEEccC-----C---CeEE
Confidence 345556555443 35779999988543322222222223334331 2345789999986521 1 1347
Q ss_pred EEEeec
Q 002527 737 MVMENL 742 (912)
Q Consensus 737 vVMeNl 742 (912)
+|||..
T Consensus 78 lv~e~~ 83 (287)
T cd06621 78 IAMEYC 83 (287)
T ss_pred EEEEec
Confidence 999975
No 18
>PF08772 NOB1_Zn_bind: Nin one binding (NOB1) Zn-ribbon like; InterPro: IPR014881 This entry corresponds to a zinc ribbon and is found on the RNA binding protein NOB1. ; PDB: 2CON_A.
Probab=22.67 E-value=35 Score=30.83 Aligned_cols=32 Identities=9% Similarity=0.331 Sum_probs=12.4
Q ss_pred CCCCCCCCCCccccceeeeecCceEEEEEEeC
Q 002527 12 RKQCASCSELPEAHFYYYARHNKQLTIRVKRL 43 (912)
Q Consensus 12 ~~~C~sC~~pm~~Hvr~YvH~~g~ltI~v~~l 43 (912)
..-||.||-+-+.-|-.+|..+|.+++.+++=
T Consensus 24 k~FCp~CGn~TL~rvsvsv~~~G~~~~~~~~~ 55 (73)
T PF08772_consen 24 KQFCPKCGNATLKRVSVSVDEDGKIKLHLKKN 55 (73)
T ss_dssp --S-SSS--S--EEEE-B--SS---B------
T ss_pred ceeCcccCCCcceEEEEEECCCCCEEEEecCC
Confidence 44599999999999999999999999998864
No 19
>PF07450 HycH: Formate hydrogenlyase maturation protein HycH; InterPro: IPR010005 This family contains the bacterial formate hydrogenlyase maturation protein HycH, which is approximately 140 residues long. This may be required for the conversion of a precursor form of the large subunit of hydrogenlyase 3 into a mature form [].
Probab=22.08 E-value=43 Score=33.46 Aligned_cols=22 Identities=45% Similarity=0.733 Sum_probs=17.8
Q ss_pred CCCceeeeeeEEecCCceeEEeEEEeeec
Q 002527 811 IDVMDYSLLVGVDSQRRELVCGIIDYLRQ 839 (912)
Q Consensus 811 ~nIMDYSLLVGi~~~~~~~~lGIID~L~~ 839 (912)
..||=|||-||-| +|+||+|..
T Consensus 24 kqV~yYSLaIGHh-------vGvIDcle~ 45 (131)
T PF07450_consen 24 KQVMYYSLAIGHH-------VGVIDCLEK 45 (131)
T ss_pred hheeEEEeeeccc-------cceEeechh
Confidence 3588899999954 799999853
No 20
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=21.41 E-value=1.7e+02 Score=34.12 Aligned_cols=50 Identities=14% Similarity=0.243 Sum_probs=41.2
Q ss_pred eEeecCCceeEeecchhHHHH--HHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 002527 139 YNMCVPPQKLEFSNSINKWLK--EEFQNVYTKGILLFSEVESSLKQIGSRFV 188 (912)
Q Consensus 139 ~ev~lPp~~l~f~~~~~~~l~--~E~~~v~~k~~~~f~~V~~rL~~i~~d~~ 188 (912)
+|-++|..++.......+|.. +.++.........+..+..-|.+|..++.
T Consensus 200 vERV~PqLKv~~~~d~kDWR~hleqm~~~~~~I~~~~~~~~~~L~kl~~~i~ 251 (359)
T PF10498_consen 200 VERVLPQLKVTIRADAKDWRSHLEQMKQHKKSIESALPETKSQLDKLQQDIS 251 (359)
T ss_pred HHHHhhhheeeccCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 467899999999988888887 67888888888888888888888887753
No 21
>PRK15084 formate hydrogenlyase maturation protein HycH; Provisional
Probab=20.35 E-value=46 Score=33.30 Aligned_cols=22 Identities=45% Similarity=0.711 Sum_probs=17.8
Q ss_pred CCCceeeeeeEEecCCceeEEeEEEeeec
Q 002527 811 IDVMDYSLLVGVDSQRRELVCGIIDYLRQ 839 (912)
Q Consensus 811 ~nIMDYSLLVGi~~~~~~~~lGIID~L~~ 839 (912)
..||=|||-||-| +|+||+|..
T Consensus 26 ~qV~yYSLaIGHh-------vGvIDcle~ 47 (133)
T PRK15084 26 QQVMYYSLAIGHH-------VGVIDCLEA 47 (133)
T ss_pred hheeEEEeecccc-------cceEecchh
Confidence 4588899999955 799999853
Done!