Your job contains 1 sequence.
>002530
MKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYRE
FFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAI
LIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADIL
KKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERV
FINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGAT
SKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIF
PSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL
TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL
RRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINF
SSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKS
KPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIR
ESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQ
VFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN
HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE
STHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS
TCAVLKPEQPDP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002530
(912 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q66WV0 - symbol:RBR1 "Retinoblastoma-related pr... 3295 0. 1
TAIR|locus:2082194 - symbol:RBR1 "retinoblastoma-related ... 3285 0. 1
UNIPROTKB|A5D7M0 - symbol:RBL2 "Uncharacterized protein" ... 332 3.3e-45 3
UNIPROTKB|E1BQ59 - symbol:RBL1 "Uncharacterized protein" ... 323 3.5e-45 3
UNIPROTKB|H9KZ75 - symbol:RBL2 "Uncharacterized protein" ... 318 2.9e-44 4
UNIPROTKB|Q08999 - symbol:RBL2 "Retinoblastoma-like prote... 313 4.2e-43 3
ZFIN|ZDB-GENE-030131-8179 - symbol:rbl1 "retinoblastoma-l... 305 4.3e-43 3
RGD|1595511 - symbol:Rbl1 "retinoblastoma-like 1 (p107)" ... 318 3.4e-42 2
UNIPROTKB|E2RIG3 - symbol:RBL2 "Uncharacterized protein" ... 308 4.0e-42 3
MGI|MGI:103300 - symbol:Rbl1 "retinoblastoma-like 1 (p107... 304 8.2e-42 2
UNIPROTKB|H9L1Q3 - symbol:RBL2 "Uncharacterized protein" ... 293 1.8e-41 4
MGI|MGI:105085 - symbol:Rbl2 "retinoblastoma-like 2" spec... 302 2.9e-41 3
UNIPROTKB|P28749 - symbol:RBL1 "Retinoblastoma-like prote... 309 3.4e-41 2
RGD|3541 - symbol:Rbl2 "retinoblastoma-like 2" species:10... 298 3.9e-41 3
UNIPROTKB|O55081 - symbol:Rbl2 "Retinoblastoma-like prote... 298 3.9e-41 3
UNIPROTKB|F1PBK3 - symbol:RBL1 "Uncharacterized protein" ... 297 1.1e-39 2
UNIPROTKB|E2RQ78 - symbol:RBL1 "Uncharacterized protein" ... 297 1.1e-39 2
UNIPROTKB|F1SEM0 - symbol:RBL1 "Uncharacterized protein" ... 288 2.6e-39 2
UNIPROTKB|E1BMR3 - symbol:RBL1 "Uncharacterized protein" ... 281 3.9e-38 2
UNIPROTKB|Q9BDQ3 - symbol:RB1 "Retinoblastoma protein 1" ... 256 2.1e-36 3
UNIPROTKB|P06400 - symbol:RB1 "Retinoblastoma-associated ... 256 2.7e-36 3
UNIPROTKB|F1RK14 - symbol:RB1 "Uncharacterized protein" s... 262 5.4e-36 3
UNIPROTKB|F1NV90 - symbol:RB1 "Retinoblastoma-associated ... 263 6.4e-36 3
UNIPROTKB|E1BZL8 - symbol:RB1 "Retinoblastoma-associated ... 263 7.2e-36 3
UNIPROTKB|E1C0H8 - symbol:RB1 "Retinoblastoma-associated ... 263 7.4e-36 3
UNIPROTKB|F1NAY3 - symbol:RB1 "Retinoblastoma-associated ... 263 7.9e-36 3
UNIPROTKB|Q90600 - symbol:RB1 "Retinoblastoma-associated ... 263 7.9e-36 3
UNIPROTKB|F1NAY1 - symbol:RB1 "Retinoblastoma-associated ... 263 9.7e-36 3
UNIPROTKB|F1MD46 - symbol:RB1 "Uncharacterized protein" s... 260 2.8e-35 3
MGI|MGI:97874 - symbol:Rb1 "retinoblastoma 1" species:100... 264 3.3e-35 3
RGD|3540 - symbol:Rb1 "retinoblastoma 1" species:10116 "R... 266 8.2e-35 3
UNIPROTKB|J9NU49 - symbol:RB1 "Uncharacterized protein" s... 261 1.1e-34 3
UNIPROTKB|F1PQ32 - symbol:RB1 "Uncharacterized protein" s... 245 6.8e-33 3
UNIPROTKB|F1NEZ1 - symbol:F1NEZ1 "Uncharacterized protein... 293 2.8e-26 4
UNIPROTKB|F5H837 - symbol:RBL2 "Retinoblastoma-like prote... 313 1.4e-24 1
DICTYBASE|DDB_G0290551 - symbol:rblA "retinoblastoma-like... 199 2.1e-24 5
FB|FBgn0015799 - symbol:Rbf "Retinoblastoma-family protei... 189 2.5e-23 3
UNIPROTKB|B7Z913 - symbol:RBL2 "cDNA FLJ53278, highly sim... 277 1.3e-22 2
FB|FBgn0038390 - symbol:Rbf2 "Retinoblastoma-family prote... 157 2.5e-21 4
ZFIN|ZDB-GENE-040428-1 - symbol:rb1 "retinoblastoma 1" sp... 160 8.7e-21 3
UNIPROTKB|I3LUP8 - symbol:RBL2 "Uncharacterized protein" ... 203 7.1e-17 2
WB|WBGene00003020 - symbol:lin-35 species:6239 "Caenorhab... 163 4.5e-16 4
UNIPROTKB|G5EDT1 - symbol:lin-35 "Synthetic multivulva pr... 163 4.5e-16 4
UNIPROTKB|H9KZ60 - symbol:RBL2 "Uncharacterized protein" ... 186 5.3e-13 2
>UNIPROTKB|Q66WV0 [details] [associations]
symbol:RBR1 "Retinoblastoma-related protein 1" species:4100
"Nicotiana benthamiana" [GO:0032875 "regulation of DNA
endoreduplication" evidence=IMP] [GO:0051782 "negative regulation
of cell division" evidence=IMP] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0051782
GO:GO:0032875 InterPro:IPR024599 Pfam:PF11934 HSSP:P06400
EMBL:AY699399 ProteinModelPortal:Q66WV0 Uniprot:Q66WV0
Length = 1003
Score = 3295 (1165.0 bits), Expect = 0., P = 0.
Identities = 661/913 (72%), Positives = 737/913 (80%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KLN+VDFFKELPQF++K GP LSN+YG+DWE RLE KELQ NFVHLS+LSK YKR Y+E
Sbjct: 109 KLNVVDFFKELPQFILKVGPTLSNLYGSDWEKRLEVKELQTNFVHLSLLSKYYKRAYQEL 168
Query: 62 FLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAIL 121
FL S N DK SA ++++ ++ Y+RFGWLLFL+LRIH FSRFKDLVTCTNGLVS+LAIL
Sbjct: 169 FLASGNNEDKPSATSNSAIHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAIL 228
Query: 122 IIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILK 181
+IHVPVRFRNFNI DSSRFVKK +K VDL+ASL IY TS DDLR+ M+K N LI + LK
Sbjct: 229 MIHVPVRFRNFNIDDSSRFVKKGDK-VDLLASLSKIYQTSIDDLRETMDKVNNLITEKLK 287
Query: 182 KKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVF 241
KKPC ASE ++ENL+N+DTDGL YFE+LM + LEKDY +A +NKGELDER+F
Sbjct: 288 KKPCLASEFRTENLDNLDTDGLTYFEDLMEESCLSSSVSTLEKDYSDAIQNKGELDERIF 347
Query: 242 INEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS 301
+NE+D AVN+ G KRKFD++ASP KT+TS LSP+RS PN A S
Sbjct: 348 VNEEDSLLGSGSLSGGAVNMNGTKRKFDAMASPAKTVTSTLSPYRS----PNC----ANS 399
Query: 302 KMVV-TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIF 360
KM TPVSTAMTTA+WLRTVI PL KPSAELERFL SCD+DVT DV+RRA IILEAIF
Sbjct: 400 KMTAATPVSTAMTTARWLRTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIF 459
Query: 361 PSSGLGERCVTG-SLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 419
PSSG E C G SLQ +LMDNIWAEQRR EALKLYYRVL+ MCTAE+Q+L+ NLTSL
Sbjct: 460 PSSGPAEHCAAGGSLQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSL 519
Query: 420 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 479
LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE
Sbjct: 520 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 579
Query: 480 LRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHIN 539
LRRHLNSLEERLLESMVWEKGSSMYNSL VA+P L+AEINR+GLLA+PMPSLDAIA HIN
Sbjct: 580 LRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHIN 639
Query: 540 FSSGGLSPVHSLHKHETSP-GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRXXXXXXX 598
SSG L P+ SLHK+ +P GQ GDIRSPK+ C++YRSVLVERN+FTSPVKDR
Sbjct: 640 LSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFLALNNI 699
Query: 599 XXXXXXXXXQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQ 658
SAFASPTRPNPGGGGETCAET IN+FF KI KLAAVRIN M+ERLQLSQQ
Sbjct: 700 KSKFPPPALHSAFASPTRPNPGGGGETCAETAINVFFGKIVKLAAVRINGMIERLQLSQQ 759
Query: 659 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 718
IRE+VYCLFQ+IL+QRTSLFFNRHIDQIILC FYGVAKISQLNLTF+EII NYRKQPQCK
Sbjct: 760 IRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCK 819
Query: 719 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 778
PQVFRSVFVDW AR + R+ DHVDIITFYN++F+P+VKPLLVEL PAG N SE
Sbjct: 820 PQVFRSVFVDWTLARHNVRTGADHVDIITFYNEMFIPSVKPLLVELAPAGN----N--SE 873
Query: 779 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACV 838
N +NDG P SPK S FP LPDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACV
Sbjct: 874 KNDHNDGQGPASPKPSPFPKLPDMSPKKVSAVHNVYVSPLRASKMDALISHSSKSYYACV 933
Query: 839 GESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFXXXXXXXXXXXXXXXANSLYLQNGSAA 898
GESTHAYQSPSKDL IN+RLN NR++RG LNF ANSLYLQNG+
Sbjct: 934 GESTHAYQSPSKDLDVINNRLNGNRKLRGALNFDVDAGLVSDSIV---ANSLYLQNGNCR 990
Query: 899 ASTCAVLKPEQPD 911
S A +K EQP+
Sbjct: 991 -SPVAHVKTEQPE 1002
>TAIR|locus:2082194 [details] [associations]
symbol:RBR1 "retinoblastoma-related 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0051783
"regulation of nuclear division" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010090 "trichome morphogenesis"
evidence=RCA;IMP] [GO:0032875 "regulation of DNA endoreduplication"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0001558 "regulation of cell growth" evidence=IMP] [GO:2000036
"regulation of stem cell maintenance" evidence=IMP] [GO:0009553
"embryo sac development" evidence=IMP] [GO:0009567 "double
fertilization forming a zygote and endosperm" evidence=IEP]
[GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP;TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0009555 "pollen development" evidence=IMP] [GO:0022619
"generative cell differentiation" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=IGI] [GO:0008134 "transcription
factor binding" evidence=TAS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005829 GO:GO:0005634 GO:GO:0001708
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019048 GO:GO:0010090
GO:GO:0006355 GO:GO:0001558 GO:GO:0003677 GO:GO:0000082
GO:GO:0006351 GO:GO:0048366 GO:GO:0009553 GO:GO:0008134
EMBL:AP002047 EMBL:AC069472 GO:GO:0006349 GO:GO:0008356
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0051783 GO:GO:0032875 GO:GO:0009567 GO:GO:2000036
eggNOG:NOG296920 KO:K04681 InterPro:IPR024599 Pfam:PF11934
EMBL:AF245395 EMBL:AY056293 EMBL:AY150438 IPI:IPI00541504
RefSeq:NP_566417.3 UniGene:At.14958 HSSP:P06400
ProteinModelPortal:Q9LKZ3 SMR:Q9LKZ3 DIP:DIP-33046N IntAct:Q9LKZ3
STRING:Q9LKZ3 PaxDb:Q9LKZ3 PRIDE:Q9LKZ3 EnsemblPlants:AT3G12280.1
GeneID:820408 KEGG:ath:AT3G12280 GeneFarm:3420 TAIR:At3g12280
HOGENOM:HOG000078660 InParanoid:Q9LHH8 OMA:FGERICT PhylomeDB:Q9LKZ3
ProtClustDB:CLSN2690882 Genevestigator:Q9LKZ3 GO:GO:0022619
Uniprot:Q9LKZ3
Length = 1013
Score = 3285 (1161.4 bits), Expect = 0., P = 0.
Identities = 664/921 (72%), Positives = 739/921 (80%)
Query: 1 MKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYRE 60
+KLNIVDFFKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +RE
Sbjct: 108 LKLNIVDFFKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFRE 167
Query: 61 FFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAI 120
FFL DAN +K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAI
Sbjct: 168 FFLTYDANAEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAI 225
Query: 121 LIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADIL 180
LIIHVP RFRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ IL
Sbjct: 226 LIIHVPCRFRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETIL 285
Query: 181 KKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERV 240
KKKP ASEC+++ L+NID DGL YFE+L+ LEKDY + KGELDERV
Sbjct: 286 KKKPSPASECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERV 342
Query: 241 FINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGAT 300
FINE+D AVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G AT
Sbjct: 343 FINEEDSLLGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISG-AT 401
Query: 301 SKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIF 360
K+ TPVSTAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIF
Sbjct: 402 -KLAATPVSTAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIF 460
Query: 361 PSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL 420
P+S LG +C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLL
Sbjct: 461 PNSSLGAQCGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLL 520
Query: 421 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 480
TNERFHRCMLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPREL
Sbjct: 521 TNERFHRCMLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPREL 580
Query: 481 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINF 540
RRHLNSLEERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INF
Sbjct: 581 RRHLNSLEERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINF 640
Query: 541 SSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRXXXXXXXXX 600
S G + S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDR
Sbjct: 641 SDGA-NHASSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKS 699
Query: 601 XXXXXXXQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIR 660
QSAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIR
Sbjct: 700 KMLPPPLQSAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIR 759
Query: 661 ESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQ 720
ESVYC FQ +L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP
Sbjct: 760 ESVYCFFQHVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPL 819
Query: 721 VFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN 780
VFRSV+VD R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N
Sbjct: 820 VFRSVYVDALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEAN 875
Query: 781 HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 840
+ +G CPGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGE
Sbjct: 876 NKPEGQCPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGE 935
Query: 841 STHAYQSPSKDLTDINHRLN--SNRRVRGTLNFXXXXXXXXXXXXXXXANSLYLQN---- 894
STHAYQSPSKDL+ IN+RLN S+ R R TLNF ANSL LQN
Sbjct: 936 STHAYQSPSKDLSAINNRLNNSSSNRKR-TLNFDAEAGMVSDSMV---ANSLNLQNQNQN 991
Query: 895 --GSAAAST--CAVLKPEQPD 911
GS A+S+ A LK E D
Sbjct: 992 QNGSDASSSGGAAPLKTEPTD 1012
>UNIPROTKB|A5D7M0 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
OrthoDB:EOG4PNXG9 EMBL:DAAA02046444 EMBL:BC140608 IPI:IPI00852473
RefSeq:NP_001091542.1 UniGene:Bt.17722 STRING:A5D7M0
Ensembl:ENSBTAT00000021613 GeneID:533294 KEGG:bta:533294
InParanoid:A5D7M0 NextBio:20875987 Uniprot:A5D7M0
Length = 1140
Score = 332 (121.9 bits), Expect = 3.3e-45, Sum P(3) = 3.3e-45
Identities = 130/494 (26%), Positives = 218/494 (44%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T +S+
Sbjct: 146 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCT---VSEVFH 202
Query: 88 FGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VPVRFRNFNIHD 136
F W+LF+ + + F D L+ C LV A+ + V F+ +
Sbjct: 203 FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDF 261
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 195
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 262 HAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENL 318
Query: 196 ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXX 255
G + E+ + K Y+ + G LDER+F+ ED
Sbjct: 319 TGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGED--AEEEIGTL 365
Query: 256 XXAVNITGAKRKFDSLASPVKTITSPLSPHRS-SASHP-NGIAGGATSKMVVTPVSTAMT 313
+N TG+ + + ++ S P G+ S VTPVSTA
Sbjct: 366 SRCLN-TGSGAETAERVQMKNILQQHFDKSKALRVSTPLTGVRYIKDSSPCVTPVSTATH 424
Query: 314 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGS 373
+ L T++ L + PS LE+ L+SC +D T + R + E I+ E
Sbjct: 425 SLSRLHTMLTGLRNAPSERLEQTLRSCSRDPTQAIANRLKEMYE-IYSQHFQSEE----- 478
Query: 374 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 433
G+N +I ++ R + LYY+VLE++ E + L +L+ +L + FHR +LAC
Sbjct: 479 -DGSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACC 536
Query: 434 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 493
E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+
Sbjct: 537 LEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILD 595
Query: 494 SMVWEKGSSMYNSL 507
+ W+ S +++ +
Sbjct: 596 HLAWKPESPLWDRI 609
Score = 298 (110.0 bits), Expect = 1.9e-41, Sum P(3) = 1.9e-41
Identities = 100/350 (28%), Positives = 161/350 (46%)
Query: 222 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 281
+ K Y+ + G LDER+F+ ED +N TG+ + +
Sbjct: 334 INKAYEEYVLSVGNLDERIFLGED--AEEEIGTLSRCLN-TGSGAETAERVQMKNILQQH 390
Query: 282 LSPHRS-SASHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 339
++ S P G+ S VTPVSTA + L T++ L + PS LE+ L+S
Sbjct: 391 FDKSKALRVSTPLTGVRYIKDSSPCVTPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRS 450
Query: 340 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 399
C +D T + R + E I+ E G+N +I ++ R + LYY+V
Sbjct: 451 CSRDPTQAIANRLKEMYE-IYSQHFQSEE------DGSNCAKDIASKHFRFAEM-LYYKV 502
Query: 400 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 459
LE++ E + L +L+ +L + FHR +LAC E+V ++K FP + E +
Sbjct: 503 LESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPL 561
Query: 460 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 519
+ KVIE FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ + E N
Sbjct: 562 YHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIR------DNE-N 614
Query: 520 RLGLLADPMP--SLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSP 567
R+ + MP +L+ A I + L+P S G I SP
Sbjct: 615 RVPTCEEVMPPQNLER-ADEICIAGSPLTPRRVSEVRADSGGLGRSISSP 663
Score = 203 (76.5 bits), Expect = 3.3e-45, Sum P(3) = 3.3e-45
Identities = 41/125 (32%), Positives = 77/125 (61%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 746
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRRRNSGSSDSRSHQNSP 953
Query: 747 TFYNK 751
T NK
Sbjct: 954 TELNK 958
Score = 79 (32.9 bits), Expect = 3.3e-45, Sum P(3) = 3.3e-45
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 847
+P +S +P + SP+++ S H VY+SP K +A++S K +Y + S
Sbjct: 1032 APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEAMLSPREKIFY-------YFSNS 1081
Query: 848 PSKDLTDINHRLNSNR---RVRGTL 869
PSK L +IN + + + RG L
Sbjct: 1082 PSKRLREINSMIRTGETPTKKRGIL 1106
Score = 63 (27.2 bits), Expect = 1.6e-43, Sum P(3) = 1.6e-43
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E++ D+I FYN I++ +K AMK ++ + + D P P SP V
Sbjct: 999 EEERGDLIQFYNNIYIRQMKTF---------AMKYSQANAM----DAP-PLSPYPFVRTG 1044
Query: 799 LPDMSPKKVSATHNVYVSPLRTSKM 823
P ++S H VY+SP + M
Sbjct: 1045 SPRRI--QLSQNHPVYISPHKNEAM 1067
Score = 38 (18.4 bits), Expect = 4.7e-28, Sum P(3) = 4.7e-28
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 763 ELGPAGTAMKTNRVSEVNHNNDG 785
E+ AG+ + RVSEV ++ G
Sbjct: 633 EICIAGSPLTPRRVSEVRADSGG 655
>UNIPROTKB|E1BQ59 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005667 GO:GO:0000122 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:AADN02019534 EMBL:AADN02019535 IPI:IPI00588682
Ensembl:ENSGALT00000002032 Uniprot:E1BQ59
Length = 1064
Score = 323 (118.8 bits), Expect = 3.5e-45, Sum P(3) = 3.5e-45
Identities = 133/522 (25%), Positives = 235/522 (45%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
+L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ + ++ I+ +
Sbjct: 94 RLSLIQFFSKMKKWMD-----MSNV-PQEFRERVE--RLERNFEVSTVIFRKFEPIFLDI 145
Query: 62 FL-PSDANGDKQSAAASTSGY--ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSIL 118
F P++ Q + + D F W LF+ + + DLV + L+ L
Sbjct: 146 FQNPNEETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCL 205
Query: 119 AILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKI 168
++ + P R F+ + +K S +IA+LC ++D + + I
Sbjct: 206 DLVFANAILCPNRRDLLNPSFKGLPADFHAPEMKASEDPPCIIATLCELHDGLLVEAKGI 265
Query: 169 MEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYD 227
E I+ + +K + EC + L N + EN L K+Y+
Sbjct: 266 KEHYFKPYISKLFDRKILKG-ECLLD-LCN-------FTEN----------NKALNKEYE 306
Query: 228 NATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRS 287
G+ DERVF+ D A G K + A + RS
Sbjct: 307 EYVLTVGDFDERVFLGADAEEEIGTPRKFPADLQVG---KTAARAHVECHLQQHFEKKRS 363
Query: 288 SA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVT 345
A S P G + V+TPV++A + L+ ++ L + PS L +SC ++
Sbjct: 364 FAPSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSELLMAIFESCARNPA 423
Query: 346 TDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 405
++ R I E S T L G+++ D +A R A LYY++LE +
Sbjct: 424 ESIVNRVREIGETFCRSYTQP----TDELPGSHI-D--FAVNRLKLAEILYYKILETIMV 476
Query: 406 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKV 465
E + LH K++T+LL + FHR ++AC E+VL + + FP ++E + F KV
Sbjct: 477 QEMRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFYFYKV 535
Query: 466 IESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
IE IR EE L R++ +HLNS+EE++LES+ W + S+++ +L
Sbjct: 536 IEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTAL 577
Score = 189 (71.6 bits), Expect = 3.5e-45, Sum P(3) = 3.5e-45
Identities = 39/111 (35%), Positives = 67/111 (60%)
Query: 623 GETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNR 681
G +TG + +F+ K+ LA+VR+ + +L +S +R ++ F+ L L +R
Sbjct: 768 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDR 827
Query: 682 HIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA 732
H+DQ++LC FY +AK+++ TF++I+ +YR QPQ V+RSV + SA
Sbjct: 828 HLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSA 878
Score = 101 (40.6 bits), Expect = 3.5e-45, Sum P(3) = 3.5e-45
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 740 QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL 799
++ D+I FYN ++V VK A+K + ++ +H + P P SP FP++
Sbjct: 921 EERGDLIKFYNAVYVGRVKSF---------ALKYD-ITNQDHVMEAP-PLSP----FPSI 965
Query: 800 PD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINH 857
+SP+++S H+VYVSP K A ++ + Y G SPSK L DIN+
Sbjct: 966 KQQPVSPRRISQQHSVYVSP---HKNGACLTPRTALLYKFNG-------SPSKSLKDINN 1015
Query: 858 RL 859
+
Sbjct: 1016 MI 1017
>UNIPROTKB|H9KZ75 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 OMA:CCIDLIY InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005807
Uniprot:H9KZ75
Length = 981
Score = 318 (117.0 bits), Expect = 2.9e-44, Sum P(4) = 2.9e-44
Identities = 140/538 (26%), Positives = 240/538 (44%)
Query: 4 NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL 63
++++FF ++ K ++N+ + + R E L+ NF +++ K Y+ I+++ F
Sbjct: 22 SLIEFFNKM-----KKWEDMANL-PSQFRERTE--RLERNFTVSAVIFKKYEPIFQDIFR 73
Query: 64 ------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFK----DLVTCTNG 113
P G KQ + +++ +F W+LF +HA F DLV +
Sbjct: 74 YPQEDQPRQQRGRKQRRRQPCT--VTEVFQFCWVLF----VHAKGNFPMISDDLVNSYHL 127
Query: 114 LVSILAILI---IHVP-------VRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSED 163
L+ L ++ + P F+ S+ K S+ +I LCS++
Sbjct: 128 LLCALDLVYGNALQCPNHKELLNPNFKGLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVL 187
Query: 164 DLRKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNIL 222
+ + I E I + KK + K ENL G N +
Sbjct: 188 EAKGIKEHFWKPYIRKLFDKKLLKG---KDENLTGFLDPG-----NF------GDSFKAI 233
Query: 223 EKDYDNATRNKGELDERVFINED-DXXXXXXXX---------XXXAVNIT-GAKRKFDSL 271
K Y+ + G LDER+F+ ED D V + ++ FD
Sbjct: 234 NKAYEEYVLSVGNLDERIFLGEDADEEIGTLTRCLNTPSGMETAERVQVKHNLQQHFDRS 293
Query: 272 ASPVKTITSPLSPHRS-SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 330
SP +T+PL+ + S+P VTPVS A + L T++ L + PS
Sbjct: 294 KSP--RVTTPLTGRKYIKESNP-----------YVTPVSIATYSLSRLHTMLAGLKNAPS 340
Query: 331 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RR 389
LE+ ++C +D + + R + E ++ S E + +NL ++ ++ RR
Sbjct: 341 ENLEQIFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRR 393
Query: 390 LEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFP 449
E L YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP
Sbjct: 394 AEVL--YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFP 450
Query: 450 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
+ E I + KVIE FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 451 FITEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 508
Score = 196 (74.1 bits), Expect = 2.9e-44, Sum P(4) = 2.9e-44
Identities = 38/110 (34%), Positives = 69/110 (62%)
Query: 631 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 690
+++FF K+ LA+VR+ + +L +S ++R+ V+ F+ L + +RH+DQ+++C
Sbjct: 734 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWTCFEYSLMHCPEIMMDRHLDQLLMCA 793
Query: 691 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR-QSGRSE 739
Y +AK+++ + +F+ I+ YR QPQ K V+RSV + R QSG S+
Sbjct: 794 IYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRRQSGSSD 843
Score = 70 (29.7 bits), Expect = 2.9e-44, Sum P(4) = 2.9e-44
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYY 835
+P +S +P++ SP++V S H VY+SP + + AL SH K +Y
Sbjct: 929 TPPLSPYPSVRISSPRRVQLSQNHAVYISPHKN--VSAL-SHREKIFY 973
Score = 62 (26.9 bits), Expect = 2.9e-44, Sum P(4) = 2.9e-44
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 735 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGT 769
S E++ D+I FYN I++ +K ++ +GT
Sbjct: 893 SDTEEEERGDLIQFYNSIYIEQIKEFALKYTSSGT 927
Score = 39 (18.8 bits), Expect = 4.7e-41, Sum P(4) = 4.7e-41
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 843 HA-YQSPSKDLTDINHR 858
HA Y SP K+++ ++HR
Sbjct: 952 HAVYISPHKNVSALSHR 968
>UNIPROTKB|Q08999 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 Pathway_Interaction_DB:foxopathway
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GO:GO:0000080 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 EMBL:X76061 EMBL:S67171
EMBL:X74594 EMBL:U53220 IPI:IPI00304028 PIR:A49370
RefSeq:NP_005602.3 UniGene:Hs.513609 ProteinModelPortal:Q08999
SMR:Q08999 DIP:DIP-425N IntAct:Q08999 MINT:MINT-102310
STRING:Q08999 PhosphoSite:Q08999 DMDM:116242746 PaxDb:Q08999
PRIDE:Q08999 DNASU:5934 Ensembl:ENST00000262133 GeneID:5934
KEGG:hsa:5934 UCSC:uc002ehi.4 CTD:5934 GeneCards:GC16P053467
HGNC:HGNC:9894 HPA:CAB016547 HPA:HPA019703 MIM:180203
neXtProt:NX_Q08999 PharmGKB:PA34258 InParanoid:Q08999 KO:K16332
OMA:PPGNFPF OrthoDB:EOG4PNXG9 PhylomeDB:Q08999 ChiTaRS:RBL2
GenomeRNAi:5934 NextBio:23132 ArrayExpress:Q08999 Bgee:Q08999
CleanEx:HS_RBL2 Genevestigator:Q08999 GermOnline:ENSG00000103479
Uniprot:Q08999
Length = 1139
Score = 313 (115.2 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 130/498 (26%), Positives = 219/498 (43%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T +S+
Sbjct: 146 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCT---VSEIFH 202
Query: 88 FGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VPVRFRNFNIHD 136
F W+LF+ + + F D L+ C LV A+ + V F+ +
Sbjct: 203 FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDF 261
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 195
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 262 HAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENL 318
Query: 196 ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXX 255
G + E+ + K Y+ + G LDER+F+ ED
Sbjct: 319 TGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGED--AEEEIGTL 365
Query: 256 XXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSA---SHP-NGIAGGATSKMVVTPVS 309
+N + + +K I L H +S A S P G+ + VTPVS
Sbjct: 366 SRCLNAGSGTETAERVQ--MKNI---LQQHFDKSKALRISTPLTGVRYIKENSPCVTPVS 420
Query: 310 TAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERC 369
TA + L T++ L + PS +LE+ L++C +D T + R + E I+ +
Sbjct: 421 TATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-IYSQHFQPDE- 478
Query: 370 VTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 429
+N I ++ R + LYY+VLE++ E + L +L+ +L + FHR +
Sbjct: 479 -----DFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSL 532
Query: 430 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEE 489
LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE
Sbjct: 533 LACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEE 591
Query: 490 RLLESMVWEKGSSMYNSL 507
++L+ + W+ S ++ +
Sbjct: 592 QILDHLAWKPESPLWEKI 609
Score = 207 (77.9 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 42/125 (33%), Positives = 78/125 (62%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 746
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 747 TFYNK 751
T NK
Sbjct: 954 TELNK 958
Score = 75 (31.5 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 847
+P +S +P + SP+++ S H VY+SP K + ++S K +Y + S
Sbjct: 1031 APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNS 1080
Query: 848 PSKDLTDINHRLNSNR---RVRGTL 869
PSK L +IN + + + RG L
Sbjct: 1081 PSKRLREINSMIRTGETPTKKRGIL 1105
Score = 56 (24.8 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 735 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPA 767
S E++ D+I FYN I++ +K ++ A
Sbjct: 995 SDMEEEERGDLIQFYNNIYIKQIKTFAMKYSQA 1027
>ZFIN|ZDB-GENE-030131-8179 [details] [associations]
symbol:rbl1 "retinoblastoma-like 1 (p107)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
ZFIN:ZDB-GENE-030131-8179 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL EMBL:BX936390 IPI:IPI00770273
Ensembl:ENSDART00000073865 ArrayExpress:F1QY31 Bgee:F1QY31
Uniprot:F1QY31
Length = 1058
Score = 305 (112.4 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 92/288 (31%), Positives = 143/288 (49%)
Query: 222 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 281
+ +DY+ G+ DERVF+ D A +G + +
Sbjct: 303 INRDYEEFVLTVGDFDERVFLGADADEEIGTPRKSTAEPPSG---HLSARMQVENNLQQH 359
Query: 282 LSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 339
RS A S P G +++VTPVS+A + L++++ L + PS L + S
Sbjct: 360 FEKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALLQIFIS 419
Query: 340 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 399
C ++ T ++ R + E F + T L GA+ MD +AE+R A LY+++
Sbjct: 420 CSRNPTESILNRVKTLGEK-FKQAYTNP---TDDLPGAH-MD--FAEKRLKLAEILYFKI 472
Query: 400 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 459
LE + T E + L K+ LL E H +LAC E+VL ++ + FP +LE I
Sbjct: 473 LENVMTQEMKRLQGKDWAVLLEQEVLHCSLLACCLEVVLFSYSS-QRTFPWILEIFQIPP 531
Query: 460 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
F KVIE FIR EE L R++ +HLNS+EE++LES W + S+++N+L
Sbjct: 532 FYFYKVIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWTRDSALWNAL 579
Score = 199 (75.1 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 105/454 (23%), Positives = 195/454 (42%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ K ++N+ D+ +R+ L+ NF +++ + ++ I+ +
Sbjct: 96 KLSLIQFFSKM-----KKWSDMANLC-QDFRSRIG--RLERNFEVSTVIFRKFEPIFLDM 147
Query: 62 FLPSDANGDKQSAAASTSG---YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSIL 118
F + + + +ISD +F W LF+ + + DLV + L+ L
Sbjct: 148 FQNPQSEPPRMPRSRKHRRLPCHISDVFKFCWTLFVYTKGNFHMIGDDLVNSYHLLLCCL 207
Query: 119 AILIIHVPV-RFRNFNIHDSSRFVKKSNKGVD----LIASLCSIYDTSEDDLRKIMEKT- 172
++ + + R I+ + R + K + + +I LC ++D + + I E
Sbjct: 208 DLVFCNALMCSNRKDLINQNFRGLPKDTENLKEMPCVIDKLCELHDGLVVEAKGIKEHYF 267
Query: 173 NTLIADILKKKPCEASECKSENL-ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATR 231
I + +K+ + E L E +DT F++ + +DY+
Sbjct: 268 KPYIKTLFEKRMLKGDV---ETLTELLDTPN---FQD---------NNKAINRDYEEFVL 312
Query: 232 NKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-S 290
G+ DERVF+ D A +G + + RS A S
Sbjct: 313 TVGDFDERVFLGADADEEIGTPRKSTAEPPSG---HLSARMQVENNLQQHFEKTRSLAPS 369
Query: 291 HP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 349
P G +++VTPVS+A + L++++ L + PS L + SC ++ T ++
Sbjct: 370 TPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALLQIFISCSRNPTESIL 429
Query: 350 RRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ 409
R + E F + T L GA+ MD +AE+R A LY+++LE + T E +
Sbjct: 430 NRVKTLGEK-FKQAYTNP---TDDLPGAH-MD--FAEKRLKLAEILYFKILENVMTQEMK 482
Query: 410 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKT 443
L K+ LL E H +LAC E+VL ++ +
Sbjct: 483 RLQGKDWAVLLEQEVLHCSLLACCLEVVLFSYSS 516
Score = 187 (70.9 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 40/119 (33%), Positives = 70/119 (58%)
Query: 610 AFASPTRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 668
A +S ++P P TG + +FF K+ LA+VR+ + +L +S ++R ++ F+
Sbjct: 753 AISSDSQPPPANKPR---RTGSLALFFRKVYHLASVRLRDLCLKLDISSELRGKIWTCFE 809
Query: 669 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 727
L T L +RH+DQ++LC Y +++I++ TF++I+ YR QPQ V+RSV +
Sbjct: 810 HSLLHCTDLMKDRHLDQLLLCAVYIISRITKEEHTFQDIMKCYRTQPQANSHVYRSVLI 868
Score = 102 (41.0 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 728 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 787
D A Q+ ++ D+I FYN I+V ++ A K +S +++ + P
Sbjct: 903 DQADRTQTVFESEERGDLIQFYNNIYVSKMRSF---------AFKY-ALSTLDNRMEAP- 951
Query: 788 PGSPKVSVFPALPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAY 845
P SP FP++ +SP++VS H+++VSP + S ++ S+ Y G
Sbjct: 952 PLSP----FPSVRSHTLSPRRVSQKHSIFVSPHKNSSS---LTPSTAYTYRFTG------ 998
Query: 846 QSPSKDLTDINHRL 859
SPSK+L+DIN +
Sbjct: 999 -SPSKELSDINQMI 1011
>RGD|1595511 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
RGD:1595511 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00357966
IntAct:D3ZS62 Ensembl:ENSRNOT00000009528 UCSC:RGD:1595511
Uniprot:D3ZS62
Length = 1063
Score = 318 (117.0 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 136/536 (25%), Positives = 236/536 (44%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDI 146
Query: 62 F------LPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLV 115
F LP KQ + + D F W LF+ + + DLV + L+
Sbjct: 147 FQNPYEELPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLL 203
Query: 116 SILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDL 165
L ++ I P R F+ + K + + +IA LC ++D +
Sbjct: 204 CCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFKAAEEPPCIIAVLCDLHDGLLVEA 263
Query: 166 RKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEK 224
+ I E I+ + KK + EC L+ + K
Sbjct: 264 KGIKEHYFKPYISKLFDKKILKG-EC------------------LLDLSSFTDNSKAVNK 304
Query: 225 DYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSP 284
+Y+ G+ DER+F+ D A G K S AS +
Sbjct: 305 EYEEYVLTVGDFDERIFLGADAEEEIGTPRKFAADTQFG---KLTSQASVDCNLQQHFEK 361
Query: 285 HRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDK 342
RS A S P G + V TPV++A + L++++ L S PS +L +SC +
Sbjct: 362 KRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCMR 421
Query: 343 DVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEA 402
+ ++++ I++ I + T G+++ D +A R A LYY++LE
Sbjct: 422 NPMGNIVK----IVKGIGETFCQHYTQSTDKQPGSHI-D--FAVNRLKLAEILYYKILET 474
Query: 403 MCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 462
+ E + LH +++ LL + FHR +LAC E+VL + + FP +++ G+ F
Sbjct: 475 IMVQETRRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSS-PRTFPWIIDVLGLQPFYF 533
Query: 463 SKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV-ARPVLSAE 517
KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L A V S E
Sbjct: 534 YKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALRASANKVPSCE 589
Score = 219 (82.2 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 615 TRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 673
T+ P G TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L
Sbjct: 770 TQDAPLTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVH 829
Query: 674 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---VDWA 730
L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 830 CPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGE 889
Query: 731 SARQSGRSEQDHVDI--ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVS----EVNHNND 784
+G E DI T VK +L A+ RV + + +N
Sbjct: 890 VVAYNGDYEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNAIYVGRVKSFALKYDLSNQ 949
Query: 785 GPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSP 817
+P +S FP + SP+++S H++YVSP
Sbjct: 950 DHIMDAPPLSPFPHIKQQPGSPRRISQQHSIYVSP 984
Score = 40 (19.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 18/102 (17%), Positives = 38/102 (37%)
Query: 273 SPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAE 332
S V + +SP ++ + G T + V P+ A + V + + +
Sbjct: 686 SSVTAESLSISPGQALLTMATTTVTGTTGRKVTVPLHGIANDAGEITLVPISMNTTQDST 745
Query: 333 LERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 374
E + + + ++ H+ P +G+ + TGSL
Sbjct: 746 AESLVSLTAQSLIGASPKQTHLTKTQDAPLTGISKPKRTGSL 787
Score = 38 (18.4 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 813 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 856
+ ++ + S ++L+S +++S + TH ++ LT I+
Sbjct: 736 ISMNTTQDSTAESLVSLTAQSLIGASPKQTHLTKTQDAPLTGIS 779
>UNIPROTKB|E2RIG3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
EMBL:AAEX03001603 RefSeq:XP_535303.2 Ensembl:ENSCAFT00000015343
GeneID:478127 KEGG:cfa:478127 Uniprot:E2RIG3
Length = 1139
Score = 308 (113.5 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 130/498 (26%), Positives = 222/498 (44%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T +S+
Sbjct: 146 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCT---VSEVFH 202
Query: 88 FGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VPVRFRNFNIHD 136
F W+LF+ + + F D L+ C LV A+ + V F+ +
Sbjct: 203 FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDF 261
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 195
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 262 HAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENL 318
Query: 196 ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXX 255
G + E+ + K Y+ + G LDER+F+ +D
Sbjct: 319 TGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGDD--AEEEIGTL 365
Query: 256 XXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSA---SHP-NGIAGGATSKMVVTPVS 309
+N + + +K I L H +S A S P G+ + VTPVS
Sbjct: 366 SKCLNSGSGTETAERVQ--MKNI---LQQHFDKSKALRISTPLTGVRYMKDNSPCVTPVS 420
Query: 310 TAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERC 369
TA + L T++ L + PS +LE+ L++C +D T + R + E I+ + C
Sbjct: 421 TATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYE-IY-----SQHC 474
Query: 370 VTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 429
+N + I ++ R + LYY+VLE++ E + L +L+ +L + FHR +
Sbjct: 475 QPDE-DFSNSKE-IASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSL 531
Query: 430 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEE 489
LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE
Sbjct: 532 LACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEE 590
Query: 490 RLLESMVWEKGSSMYNSL 507
++L+ + W+ S +++ +
Sbjct: 591 QILDHLAWKPESPLWDRI 608
Score = 203 (76.5 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 41/125 (32%), Positives = 77/125 (61%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 833 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 892
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 746
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 893 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 952
Query: 747 TFYNK 751
T NK
Sbjct: 953 TELNK 957
Score = 75 (31.5 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 847
+P +S +P + SP+++ S H VY+SP K + ++S K +Y + S
Sbjct: 1031 APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNS 1080
Query: 848 PSKDLTDINHRLNSNR---RVRGTL 869
PSK L +IN + + + RG L
Sbjct: 1081 PSKRLREINSMIRTGETPTKKRGIL 1105
Score = 66 (28.3 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 735 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 794
S E++ D+I FYN I++ +K AMK ++ + + D P P SP
Sbjct: 994 SDMEEEERGDLIQFYNNIYIKQIKTF---------AMKYSQANIM----DAP-PLSPYPF 1039
Query: 795 VFPALPDMSPKKVSATHNVYVSPLRTSKM 823
V P ++S H VY+SP + M
Sbjct: 1040 VRTGSPRRI--QLSQNHPVYISPHKNETM 1066
>MGI|MGI:103300 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 MGI:MGI:103300 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL669828 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933
HOGENOM:HOG000273892 HOVERGEN:HBG017710 OMA:RRDMQPL
OrthoDB:EOG4QZ7KB GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:U33320 EMBL:U27177 EMBL:U27178 EMBL:AK156055 IPI:IPI00137864
IPI:IPI00352179 PIR:I49328 RefSeq:NP_001132988.1 RefSeq:NP_035379.2
UniGene:Mm.244671 ProteinModelPortal:Q64701 SMR:Q64701
IntAct:Q64701 STRING:Q64701 PhosphoSite:Q64701 PaxDb:Q64701
PRIDE:Q64701 Ensembl:ENSMUST00000029170 GeneID:19650 KEGG:mmu:19650
UCSC:uc008nos.2 InParanoid:Q3U1D4 NextBio:296908 Bgee:Q64701
CleanEx:MM_RBL1 Genevestigator:Q64701 GermOnline:ENSMUSG00000027641
Uniprot:Q64701
Length = 1063
Score = 304 (112.1 bits), Expect = 8.2e-42, Sum P(2) = 8.2e-42
Identities = 132/535 (24%), Positives = 234/535 (43%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDI 146
Query: 62 FL-----PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 116
F P ++ S + D F W LF+ + + DLV + L+
Sbjct: 147 FQNPYEEPPKLPRSRKQRRIPCS--VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 117 ILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 166
L ++ I P R F+ + K + + +IA LC ++D + +
Sbjct: 205 CLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDGLLVEAK 264
Query: 167 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKD 225
I E I+ + KK + EC L+ + K+
Sbjct: 265 GIKEHYFKPYISKLFDKKILKG-EC------------------LLDLSSFTDNSKAVNKE 305
Query: 226 YDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH 285
Y+ G+ DER+F+ D A G K S AS +
Sbjct: 306 YEEYVLTVGDFDERIFLGADAEEEIGTPRKFTADTPFG---KLTSQASVECNLQQHFEKK 362
Query: 286 RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD 343
RS A S P G + V TPV++A + L++++ L S PS +L +SC ++
Sbjct: 363 RSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRN 422
Query: 344 VTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 403
++++ I++ I + T G+++ D +A R A LYY++LE +
Sbjct: 423 PMGNIIK----IVKGIGETFCQHYTQSTDKQPGSHI-D--FAVNRLKLAEILYYKILETI 475
Query: 404 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLS 463
E + LH +++ LL + FH+ ++AC E+VL + + FP ++E + F
Sbjct: 476 MVQETRRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFY 534
Query: 464 KVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV-ARPVLSAE 517
KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L A V S E
Sbjct: 535 KVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCE 589
Score = 230 (86.0 bits), Expect = 8.2e-42, Sum P(2) = 8.2e-42
Identities = 74/249 (29%), Positives = 119/249 (47%)
Query: 629 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 687
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 784 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 843
Query: 688 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---VDWASARQSGRSEQDHVD 744
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + +G E D
Sbjct: 844 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGD 903
Query: 745 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVSVFP 797
I K + +P+ E G T V V +N +P +S FP
Sbjct: 904 IEDA-TKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSFALKYDLSNQDHIMDAPPLSPFP 962
Query: 798 ALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDI 855
+ SP+++S H++YVSP K A ++ S Y G SPSK L DI
Sbjct: 963 HIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG-------SPSKSLKDI 1012
Query: 856 NHRLNSNRR 864
N+ + +
Sbjct: 1013 NNMIRQGEQ 1021
Score = 41 (19.5 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 498 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 552
E+G YN++ V R L +++ + D P L HI G + H
Sbjct: 921 ERGDLIKFYNTVYVGRVKSFALKYDLSNQDHIMDA-PPLSPFP-HIKQQPGSPRRISQQH 978
Query: 553 KHETSPGQNGDIRSPK 568
SP +NG +P+
Sbjct: 979 SLYVSPHKNGAGLTPR 994
Score = 37 (18.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 8/44 (18%), Positives = 23/44 (52%)
Query: 813 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 856
+ ++P + S ++ +S +++S + TH ++ LT ++
Sbjct: 736 ISMNPTQESTAESPVSLTAQSLIGTSPKQTHLTKAQDAHLTGVS 779
>UNIPROTKB|H9L1Q3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
EMBL:AADN02043607 Ensembl:ENSGALT00000035613 Uniprot:H9L1Q3
Length = 939
Score = 293 (108.2 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 88/293 (30%), Positives = 144/293 (49%)
Query: 222 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 281
+ K Y+ + G LDER+F+ ED +N A V+ +
Sbjct: 190 INKAYEEYVLSVGNLDERIFLGED--ADEEIGTLTRCLNTPSGMET----AERVQ-VKHN 242
Query: 282 LSPHRSSASHPN---GIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 335
L H + P + G S VTPVS A + L T++ L + PS LE+
Sbjct: 243 LQQHFDRSKSPRVTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 302
Query: 336 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALK 394
++C +D + + R + E ++ S E + +NL ++ ++ RR E L
Sbjct: 303 IFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRRAEVL- 354
Query: 395 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 454
YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP + E
Sbjct: 355 -YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEI 412
Query: 455 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
I + KVIE FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 413 FDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 465
Score = 196 (74.1 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 38/110 (34%), Positives = 69/110 (62%)
Query: 631 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 690
+++FF K+ LA+VR+ + +L +S ++R+ V+ F+ L + +RH+DQ+++C
Sbjct: 691 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWTCFEYSLMHCPEIMMDRHLDQLLMCA 750
Query: 691 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR-QSGRSE 739
Y +AK+++ + +F+ I+ YR QPQ K V+RSV + R QSG S+
Sbjct: 751 IYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRRQSGSSD 800
Score = 70 (29.7 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYY 835
+P +S +P++ SP++V S H VY+SP + + AL SH K +Y
Sbjct: 887 TPPLSPYPSVRISSPRRVQLSQNHAVYISPHKN--VSAL-SHREKIFY 931
Score = 64 (27.6 bits), Expect = 7.6e-41, Sum P(4) = 7.6e-41
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 735 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 794
S E++ D+I FYN I++ +K ++ +G D P P SP S
Sbjct: 850 SDTEEEERGDLIQFYNSIYIEQIKEFALKYTSSG-------------QTDTP-PLSPYPS 895
Query: 795 VFPALPDMSPKKVSATHNVYVSP 817
V + P ++S H VY+SP
Sbjct: 896 VRISSPRRV--QLSQNHAVYISP 916
Score = 61 (26.5 bits), Expect = 1.8e-41, Sum P(4) = 1.8e-41
Identities = 21/97 (21%), Positives = 47/97 (48%)
Query: 4 NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL 63
++++FF ++ K ++N+ + + R E L+ NF +++ K Y+ I+++ F
Sbjct: 22 SLIEFFNKM-----KKWEDMANL-PSQFRERTE--RLERNFTVSAVIFKKYEPIFQDIFR 73
Query: 64 ------PSDANGDKQSAAASTSGYISDYHRFGWLLFL 94
P G KQ + +++ +F W+LF+
Sbjct: 74 YPQEDQPRQQRGRKQRRRQPCT--VTEVFQFCWVLFV 108
Score = 39 (18.8 bits), Expect = 2.9e-38, Sum P(4) = 2.9e-38
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 843 HA-YQSPSKDLTDINHR 858
HA Y SP K+++ ++HR
Sbjct: 910 HAVYISPHKNVSALSHR 926
>MGI|MGI:105085 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10090 "Mus
musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:U50850 MGI:MGI:105085 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0000785 GO:GO:0006351
GO:GO:0016568 GO:GO:0005667 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OMA:PPGNFPF OrthoDB:EOG4PNXG9 EMBL:U36799
EMBL:U47333 EMBL:AK160027 IPI:IPI00317271 RefSeq:NP_035380.3
UniGene:Mm.235580 ProteinModelPortal:Q64700 SMR:Q64700
IntAct:Q64700 MINT:MINT-5181879 STRING:Q64700 PhosphoSite:Q64700
PaxDb:Q64700 PRIDE:Q64700 Ensembl:ENSMUST00000034091 GeneID:19651
KEGG:mmu:19651 InParanoid:Q3TVP8 NextBio:296912 Bgee:Q64700
CleanEx:MM_RBL2 Genevestigator:Q64700 GermOnline:ENSMUSG00000031666
Uniprot:Q64700
Length = 1135
Score = 302 (111.4 bits), Expect = 2.9e-41, Sum P(3) = 2.9e-41
Identities = 147/563 (26%), Positives = 244/563 (43%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T+ I +H
Sbjct: 143 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEI--FH- 199
Query: 88 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN-FNIHDSSRFVKKSNK 146
F W+LF I+A F + ++ LV+ +L+ + + + N + V + K
Sbjct: 200 FCWVLF----IYAKGNFPMI---SDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFK 252
Query: 147 GVDLIASLCSIYDT-SEDDLRKIMEKTNTLIAD-ILKKKPCEASECKSENLENIDTDGLI 204
G ++ C D+ + D ++EK +L +L+ K + K + + L+
Sbjct: 253 G---LSEDCHPKDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPY-IRKLFEKKLL 308
Query: 205 YF--ENL---MXXXXXXXXXNILEKDYDNATRNKGELDERVFINED--DXXXXXXXXXXX 257
ENL + + K Y+ G LDERVF+ ED +
Sbjct: 309 KGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCLSA 368
Query: 258 AVNITGAKRKFDSLASPVKTITSPLSPH--RSSASH---P-NGIAGGATSKMVVTPVSTA 311
A A+R + ++ I L H +S A P G+ + VTPVSTA
Sbjct: 369 ASGTESAER------TQMRDI---LQQHLDKSKALRVCTPLTGVRYVQENSPCVTPVSTA 419
Query: 312 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 371
+ L T++ L + PS +LER L+SC +D T + R + E I+ +
Sbjct: 420 AHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYE-IYSQHFQPDE--- 475
Query: 372 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 431
+N I + R + LYY+VLE++ E + L +L+ +L ++ FHR +LA
Sbjct: 476 ---NFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLA 531
Query: 432 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 491
C E+V +HK FP + E + + KVIE FIR E+ L RE+ +HLN +EE++
Sbjct: 532 CCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 590
Query: 492 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSL 551
L+ + W+ S +++ + E NR+ + MP + T + +G SP+
Sbjct: 591 LDHLAWKTKSPLWDRIR------DNE-NRVPTCEEVMPPQNLERTDEIYIAG--SPLTPR 641
Query: 552 HKHETSPGQNGDIRSPKRPCTDY 574
E G RS P T Y
Sbjct: 642 RVGEVRADAGGLGRSITSPTTLY 664
Score = 204 (76.9 bits), Expect = 2.9e-41, Sum P(3) = 2.9e-41
Identities = 42/123 (34%), Positives = 75/123 (60%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 830 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 889
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE-QDHVDIIT 747
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE + H + T
Sbjct: 890 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSPT 948
Query: 748 FYN 750
N
Sbjct: 949 ELN 951
Score = 72 (30.4 bits), Expect = 2.9e-41, Sum P(3) = 2.9e-41
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 775 RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSK 832
+ S+ N D P P SP +P + SP++V S +H +Y+SP +A+ S K
Sbjct: 1017 KYSQANAQTDTP-PLSP----YPFVRTGSPRRVQLSQSHPIYISPHNN---EAMPSPREK 1068
Query: 833 SYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 869
+Y + SPSK L +IN + + + RG L
Sbjct: 1069 IFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Score = 62 (26.9 bits), Expect = 3.2e-40, Sum P(3) = 3.2e-40
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E++ D+I FYN I+ ++ AMK S+ N D P P SP V
Sbjct: 993 EEERGDLIQFYNNIYRKQIQAF---------AMK---YSQANAQTDTP-PLSPYPFVRTG 1039
Query: 799 LPDMSPKKVSATHNVYVSPLRTSKM 823
P ++S +H +Y+SP M
Sbjct: 1040 SPRRV--QLSQSHPIYISPHNNEAM 1062
>UNIPROTKB|P28749 [details] [associations]
symbol:RBL1 "Retinoblastoma-like protein 1" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=TAS] Reactome:REACT_71
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:CH471077 Reactome:REACT_111102 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0045944 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0051726 GO:GO:0007179
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 PDB:1H28 PDBsum:1H28 eggNOG:NOG296920 KO:K04681
InterPro:IPR024599 Pfam:PF11934 EMBL:L14812 EMBL:AK290380
EMBL:AL136172 EMBL:AL365505 EMBL:AL391114 EMBL:BC032247 EMBL:M74547
EMBL:S78664 IPI:IPI00005139 IPI:IPI00375494 PIR:A47319
RefSeq:NP_002886.2 RefSeq:NP_899662.1 UniGene:Hs.207745
ProteinModelPortal:P28749 SMR:P28749 DIP:DIP-148N IntAct:P28749
MINT:MINT-1353484 STRING:P28749 PhosphoSite:P28749 DMDM:90103515
PaxDb:P28749 PRIDE:P28749 DNASU:5933 Ensembl:ENST00000344359
Ensembl:ENST00000373664 GeneID:5933 KEGG:hsa:5933 UCSC:uc002xgi.3
UCSC:uc002xgj.1 CTD:5933 GeneCards:GC20M035624 H-InvDB:HIX0040570
HGNC:HGNC:9893 MIM:116957 neXtProt:NX_P28749 PharmGKB:PA34257
HOGENOM:HOG000273892 HOVERGEN:HBG017710 InParanoid:P28749
OMA:RRDMQPL OrthoDB:EOG4QZ7KB PhylomeDB:P28749
EvolutionaryTrace:P28749 GenomeRNAi:5933 NextBio:23126
ArrayExpress:P28749 Bgee:P28749 CleanEx:HS_RBL1
Genevestigator:P28749 GermOnline:ENSG00000080839 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 Uniprot:P28749
Length = 1068
Score = 309 (113.8 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 122/517 (23%), Positives = 232/517 (44%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K Y+ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKYEPIFLDI 146
Query: 62 FL-----PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 116
F P ++ S + D F W LF ++ F+ + + LV+
Sbjct: 147 FQNPYEEPPKLPRSRKQRRIPCS--VKDLFNFCWTLF----VYTKGNFRMI---GDDLVN 197
Query: 117 ILAILIIHVPVRFRNFNIHDSSR-FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTL 175
+L+ + + F N + + + + S KG L + + T+ ++ I+ L
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFKG--LPSDFHTADFTASEEPPCIIAVLCEL 255
Query: 176 IADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGE 235
+L + + + ++ E L+ + K+Y+ G+
Sbjct: 256 HDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGD 315
Query: 236 LDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-N 293
DER+F+ D G K + A+ + RS A S P
Sbjct: 316 FDERIFLGADAEEEIGTPRKFTRDTPLG---KLTAQANVEYNLQQHFEKKRSFAPSTPLT 372
Query: 294 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAH 353
G + V+TPV++A + L++++ L + PS +L +SC ++ ++M+
Sbjct: 373 GRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMK--- 429
Query: 354 IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHA 413
IL+ I + T G+++ D +A R A LYY++LE + E + LH
Sbjct: 430 -ILKGIGETFCQHYTQSTDEQPGSHI-D--FAVNRLKLAEILYYKILETVMVQETRRLHG 485
Query: 414 KNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHE 473
+++ LL + FHR ++AC E+VL + + FP ++E + F KVIE IR E
Sbjct: 486 MDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSE 544
Query: 474 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 510
E L R++ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 545 EGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS 581
Score = 219 (82.2 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 71/253 (28%), Positives = 122/253 (48%)
Query: 629 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 687
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 688 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 747
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + + R+ ++ D
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLK-SIPREVVAYNKNINDDFE 903
Query: 748 FYNKIFVPAVKPLLVELGPA----GTAMK------TNRVSE--VNHN--NDGPCPGSPKV 793
+ A K GP G +K RV + ++ N +P +
Sbjct: 904 MIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLANQDHMMDAPPL 963
Query: 794 SVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 851
S FP + SP+++S H++Y+SP K + ++ S Y G SPSK
Sbjct: 964 SPFPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSALLYKFNG-------SPSKS 1013
Query: 852 LTDINHRLNSNRR 864
L DIN+ + +
Sbjct: 1014 LKDINNMIRQGEQ 1026
Score = 40 (19.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 19/76 (25%), Positives = 29/76 (38%)
Query: 498 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 552
E+G YN++ V R L ++ + D P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVGRVKSFALKYDLANQDHMMDA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 553 KHETSPGQNGDIRSPK 568
SP +NG +P+
Sbjct: 984 SIYISPHKNGSGLTPR 999
Score = 37 (18.1 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 15/59 (25%), Positives = 19/59 (32%)
Query: 801 DMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYAC---VGESTHAYQSPSKDLTDIN 856
DM P + H Y SP S L + E T +PS +T N
Sbjct: 635 DMQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEMLMDKIITEGTKLKIAPSSSITAEN 693
>RGD|3541 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10116 "Rattus
norvegicus" [GO:0000785 "chromatin" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568 GO:GO:0005667
GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120
RefSeq:NP_112356.1 UniGene:Rn.11020 ProteinModelPortal:O55081
IntAct:O55081 STRING:O55081 PhosphoSite:O55081 PRIDE:O55081
GeneID:81758 KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 298 (110.0 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 129/497 (25%), Positives = 218/497 (43%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T+ I +H
Sbjct: 143 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEI--FH- 199
Query: 88 FGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VPVRFRNFNIHD 136
F W+LF+ + + F D L+ C LV A+ + V F+ +
Sbjct: 200 FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGVSEDG 258
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 195
R S+ +I LCS++D + + I + I + +KK E ENL
Sbjct: 259 HPRDSHPSSDPPCVIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKLLRGKE---ENL 315
Query: 196 ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINED--DXXXXXXX 253
G + E+ + K Y+ G LDER+F+ ED +
Sbjct: 316 TGFLEPGN-FAESFKA----------VNKAYEEYVLATGSLDERIFLGEDAEEEVGTFSR 364
Query: 254 XXXXAVNITGAKRKFDSLASPVKTITSP-LSPHRS-SASHP-NGIAGGATSKMVVTPVST 310
A A+R + ++ I L ++ +P G+ + VTPVST
Sbjct: 365 CVSAASGTESAER------TQMRDILQQHLDKSKTLRVCNPLTGVRYVQENSPCVTPVST 418
Query: 311 AMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCV 370
A + L T++ L + PS +LE+ L+SC +D T + R + E I+ + V
Sbjct: 419 ATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-IYSQHFQPDENV 477
Query: 371 TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCML 430
+ A M N + R + LYY+VLE++ E + L +L+ +L + FH+ +L
Sbjct: 478 SNC---AKEMAN---KHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLL 530
Query: 431 ACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 490
AC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE+
Sbjct: 531 ACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQ 589
Query: 491 LLESMVWEKGSSMYNSL 507
+L+ + W+ S +++ +
Sbjct: 590 ILDHLAWKTKSPLWDRI 606
Score = 198 (74.8 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 40/123 (32%), Positives = 74/123 (60%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 889
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE-QDHVDIIT 747
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG E + H + T
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 948
Query: 748 FYN 750
N
Sbjct: 949 ELN 951
Score = 81 (33.6 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 775 RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSK 832
+ S+ N D P P SP +P + SP++V S +H +Y+SP K +A++S K
Sbjct: 1017 KYSQANSQMDTP-PLSP----YPFVRTGSPRRVQLSQSHPIYISP---HKNEAMLSPREK 1068
Query: 833 SYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 869
+Y + SPSK L +IN + + + RG L
Sbjct: 1069 IFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Score = 63 (27.2 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E++ D+I FYN I+ ++ AMK S+ N D P P SP V
Sbjct: 993 EEERGDLIQFYNNIYRKQIQTF---------AMK---YSQANSQMDTP-PLSPYPFVRTG 1039
Query: 799 LPDMSPKKVSATHNVYVSPLRTSKM 823
P ++S +H +Y+SP + M
Sbjct: 1040 SPRRV--QLSQSHPIYISPHKNEAM 1062
>UNIPROTKB|O55081 [details] [associations]
symbol:Rbl2 "Retinoblastoma-like protein 2" species:10116
"Rattus norvegicus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332
OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120 RefSeq:NP_112356.1
UniGene:Rn.11020 ProteinModelPortal:O55081 IntAct:O55081
STRING:O55081 PhosphoSite:O55081 PRIDE:O55081 GeneID:81758
KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 298 (110.0 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 129/497 (25%), Positives = 218/497 (43%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T+ I +H
Sbjct: 143 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEI--FH- 199
Query: 88 FGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VPVRFRNFNIHD 136
F W+LF+ + + F D L+ C LV A+ + V F+ +
Sbjct: 200 FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGVSEDG 258
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 195
R S+ +I LCS++D + + I + I + +KK E ENL
Sbjct: 259 HPRDSHPSSDPPCVIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKLLRGKE---ENL 315
Query: 196 ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINED--DXXXXXXX 253
G + E+ + K Y+ G LDER+F+ ED +
Sbjct: 316 TGFLEPGN-FAESFKA----------VNKAYEEYVLATGSLDERIFLGEDAEEEVGTFSR 364
Query: 254 XXXXAVNITGAKRKFDSLASPVKTITSP-LSPHRS-SASHP-NGIAGGATSKMVVTPVST 310
A A+R + ++ I L ++ +P G+ + VTPVST
Sbjct: 365 CVSAASGTESAER------TQMRDILQQHLDKSKTLRVCNPLTGVRYVQENSPCVTPVST 418
Query: 311 AMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCV 370
A + L T++ L + PS +LE+ L+SC +D T + R + E I+ + V
Sbjct: 419 ATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-IYSQHFQPDENV 477
Query: 371 TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCML 430
+ A M N + R + LYY+VLE++ E + L +L+ +L + FH+ +L
Sbjct: 478 SNC---AKEMAN---KHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLL 530
Query: 431 ACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 490
AC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE+
Sbjct: 531 ACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQ 589
Query: 491 LLESMVWEKGSSMYNSL 507
+L+ + W+ S +++ +
Sbjct: 590 ILDHLAWKTKSPLWDRI 606
Score = 198 (74.8 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 40/123 (32%), Positives = 74/123 (60%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 889
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE-QDHVDIIT 747
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG E + H + T
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 948
Query: 748 FYN 750
N
Sbjct: 949 ELN 951
Score = 81 (33.6 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 775 RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSK 832
+ S+ N D P P SP +P + SP++V S +H +Y+SP K +A++S K
Sbjct: 1017 KYSQANSQMDTP-PLSP----YPFVRTGSPRRVQLSQSHPIYISP---HKNEAMLSPREK 1068
Query: 833 SYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 869
+Y + SPSK L +IN + + + RG L
Sbjct: 1069 IFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Score = 63 (27.2 bits), Expect = 2.9e-39, Sum P(3) = 2.9e-39
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E++ D+I FYN I+ ++ AMK S+ N D P P SP V
Sbjct: 993 EEERGDLIQFYNNIYRKQIQTF---------AMK---YSQANSQMDTP-PLSPYPFVRTG 1039
Query: 799 LPDMSPKKVSATHNVYVSPLRTSKM 823
P ++S +H +Y+SP + M
Sbjct: 1040 SPRRV--QLSQSHPIYISPHKNEAM 1062
>UNIPROTKB|F1PBK3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
InterPro:IPR015030 Pfam:PF08934 EMBL:AAEX03013918
RefSeq:XP_534412.2 ProteinModelPortal:F1PBK3
Ensembl:ENSCAFT00000013851 GeneID:477221 KEGG:cfa:477221
Uniprot:F1PBK3
Length = 1068
Score = 297 (109.6 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 125/525 (23%), Positives = 230/525 (43%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERVE--RLERNFEVSTVIFKKFEPIFLDI 146
Query: 62 FL------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLV 115
F P KQ + + D F W LF+ + + DLV + L+
Sbjct: 147 FQNPYEEQPKFPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLL 203
Query: 116 SILAILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDL 165
L ++ + P R F+ + K S + +IA LC ++D +
Sbjct: 204 CCLDLIFANAIICPNRRDLLNPTFKGLPSDFHTADFKASEEPPCIIAVLCELHDGLLVEA 263
Query: 166 RKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEK 224
+ I E I+ + +K + EC L+ + K
Sbjct: 264 KGIKEHYFKPYISKLFDRKVLKG-EC------------------LLDLSSFTDNSKAVNK 304
Query: 225 DYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSP 284
+Y+ G+ DER+F+ D G K + A+ ++
Sbjct: 305 EYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLG---KLTAQANVDCSLQQHFEK 361
Query: 285 HRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDK 342
S A S P G + V+TPV++A + L++++ L + PS +L +SC +
Sbjct: 362 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIR 421
Query: 343 DVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEA 402
+ ++M+ I++ I + T G+++ D +A R A LYY++LE
Sbjct: 422 NPMENIMK----IVKGIGETFCQHYTQSTDEQPGSHI-D--FAINRLKLAEILYYKILET 474
Query: 403 MCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 462
+ E + LH +++ LL + FHR ++AC E+VL + + FP ++E + F
Sbjct: 475 VMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYF 533
Query: 463 SKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 534 YKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 217 (81.4 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 71/252 (28%), Positives = 120/252 (47%)
Query: 629 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 687
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 688 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI-I 746
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + ++ + D +
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNINGDFEM 904
Query: 747 T---FYNKIFVPAVK--PLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVS 794
T + P P+ E G T V+ V +N +P +S
Sbjct: 905 TDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEAPPLS 964
Query: 795 VFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDL 852
FP + SP+++S H++YVSP K + ++ S Y G SPSK L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG-------SPSKSL 1014
Query: 853 TDINHRLNSNRR 864
DIN+ + +
Sbjct: 1015 KDINNMIRQGEQ 1026
Score = 43 (20.2 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 498 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 552
E+G YN++ VAR L +++ + + P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 553 KHETSPGQNGDIRSPK 568
SP +NG +P+
Sbjct: 984 SIYVSPHKNGSGLTPR 999
Score = 40 (19.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 19/105 (18%), Positives = 42/105 (40%)
Query: 273 SPVKTITSP---LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP 329
+P +IT+ +SP +S + I G T V P+ A + + + +
Sbjct: 684 APSSSITAENISISPGQSLLTMATAIVTGTTGHKVTIPLHGIANDAGEITLIPISMNTAQ 743
Query: 330 SAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 374
+++E + + + ++ H+ +G+ + TGSL
Sbjct: 744 ESKVESPISLTAQSLIGASPKQTHLTKAQEAHPTGISKPKRTGSL 788
Score = 38 (18.4 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 16/59 (27%), Positives = 20/59 (33%)
Query: 801 DMSPKKVSATHNVYVSPLRTSKMDALISHSS-KSYYA--CVGESTHAYQSPSKDLTDIN 856
DM P + H Y SP S L K + E T +PS +T N
Sbjct: 635 DMQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEMLVDRIITEGTKLKIAPSSSITAEN 693
>UNIPROTKB|E2RQ78 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:AAEX03013918 Ensembl:ENSCAFT00000013845 NextBio:20852741
Uniprot:E2RQ78
Length = 1068
Score = 297 (109.6 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 125/525 (23%), Positives = 230/525 (43%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERVE--RLERNFEVSTVIFKKFEPIFLDI 146
Query: 62 FL------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLV 115
F P KQ + + D F W LF+ + + DLV + L+
Sbjct: 147 FQNPYEEQPKFPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLL 203
Query: 116 SILAILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDL 165
L ++ + P R F+ + K S + +IA LC ++D +
Sbjct: 204 CCLDLIFANAIICPNRRDLLNPTFKGLPSDFHTADFKASEEPPCIIAVLCELHDGLLVEA 263
Query: 166 RKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEK 224
+ I E I+ + +K + EC L+ + K
Sbjct: 264 KGIKEHYFKPYISKLFDRKVLKG-EC------------------LLDLSSFTDNSKAVNK 304
Query: 225 DYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSP 284
+Y+ G+ DER+F+ D G K + A+ ++
Sbjct: 305 EYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLG---KLTAQANVDCSLQQHFEK 361
Query: 285 HRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDK 342
S A S P G + V+TPV++A + L++++ L + PS +L +SC +
Sbjct: 362 KTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIR 421
Query: 343 DVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEA 402
+ ++M+ I++ I + T G+++ D +A R A LYY++LE
Sbjct: 422 NPMENIMK----IVKGIGETFCQHYTQSTDEQPGSHI-D--FAINRLKLAEILYYKILET 474
Query: 403 MCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 462
+ E + LH +++ LL + FHR ++AC E+VL + + FP ++E + F
Sbjct: 475 VMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYF 533
Query: 463 SKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 534 YKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 217 (81.4 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 71/252 (28%), Positives = 120/252 (47%)
Query: 629 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 687
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 688 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI-I 746
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + ++ + D +
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNINGDFEM 904
Query: 747 T---FYNKIFVPAVK--PLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVS 794
T + P P+ E G T V+ V +N +P +S
Sbjct: 905 TDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEAPPLS 964
Query: 795 VFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDL 852
FP + SP+++S H++YVSP K + ++ S Y G SPSK L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG-------SPSKSL 1014
Query: 853 TDINHRLNSNRR 864
DIN+ + +
Sbjct: 1015 KDINNMIRQGEQ 1026
Score = 43 (20.2 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 498 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 552
E+G YN++ VAR L +++ + + P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 553 KHETSPGQNGDIRSPK 568
SP +NG +P+
Sbjct: 984 SIYVSPHKNGSGLTPR 999
Score = 40 (19.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 19/105 (18%), Positives = 42/105 (40%)
Query: 273 SPVKTITSP---LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP 329
+P +IT+ +SP +S + I G T V P+ A + + + +
Sbjct: 684 APSSSITAENISISPGQSLLTMATAIVTGTTGHKVTIPLHGIANDAGEITLIPISMNTAQ 743
Query: 330 SAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 374
+++E + + + ++ H+ +G+ + TGSL
Sbjct: 744 ESKVESPISLTAQSLIGASPKQTHLTKAQEAHPTGISKPKRTGSL 788
>UNIPROTKB|F1SEM0 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 OMA:RRDMQPL GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 EMBL:CU607009
Ensembl:ENSSSCT00000008022 Uniprot:F1SEM0
Length = 1069
Score = 288 (106.4 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 128/529 (24%), Positives = 236/529 (44%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDI 146
Query: 62 FLPSDANGDKQSAAASTSGY---ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSIL 118
F K + + + F W LF+ + F+ + + LV+
Sbjct: 147 FQSPYEEPPKLPRSRKQRRIPCSVKELFNFCWTLFVYTKDKG--NFRMI---GDDLVNSY 201
Query: 119 AILIIHVPVRFRNFNIHDSSR-FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIA 177
+L+ + + F N I + R + S KG L S + T+ D R E+ +IA
Sbjct: 202 HLLLCCLDLIFANAIICPNRRDLLNPSFKG------LPSDFHTA--DFRA-PEEPPCIIA 252
Query: 178 DILKKKP---CEASECKSEN----LENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNAT 230
+ + EA K + + ++ E L+ + K+Y+
Sbjct: 253 VLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSKAVNKEYEEYV 312
Query: 231 RNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP------LSP 284
G+ DER+F+ D A G RKF A P+ +T+ L
Sbjct: 313 LTVGDFDERIFLGAD------------AEEEIGTPRKFTGDA-PLGKLTAQVNVECNLQQ 359
Query: 285 H---RSSASHPNGIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLK 338
H ++S + + G + V+TPV++A + L++++ L + PS +L +
Sbjct: 360 HFEKKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFE 419
Query: 339 SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYR 398
SC ++ ++M+ I EA T G+++ D +A R A LYY+
Sbjct: 420 SCMRNPMENIMKIVKGIGEAFCQHYTQS----TDEQPGSHI-D--FAVNRLKLAEILYYK 472
Query: 399 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGIT 458
+LE + E + LH +++ LL + FH ++AC E+VL + + FP ++E +
Sbjct: 473 ILETIMVQETRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLR 531
Query: 459 AFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 532 PFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 580
Score = 223 (83.6 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 79/267 (29%), Positives = 128/267 (47%)
Query: 629 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 687
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 786 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 845
Query: 688 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV-------------------- 727
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 846 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREAMAYNKNLNGDFEM 905
Query: 728 ---DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEV 779
D A + SG +++ D+I FYN I+V VK A+K + +S
Sbjct: 906 TDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNH 955
Query: 780 NHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYAC 837
+H + P P SP FP + SP+++S H++YVSP + + S Y
Sbjct: 956 DHVMEAP-PLSP----FPHIKQQPGSPRRISQQHSIYVSPHKNGSGP---TPRSALLYKF 1007
Query: 838 VGESTHAYQSPSKDLTDINHRLNSNRR 864
G SPSK L DIN+ + +
Sbjct: 1008 NG-------SPSKSLKDINNMIRQGEQ 1027
Score = 38 (18.4 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 498 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 552
E+G YN++ V R L +++ + + P L HI G + H
Sbjct: 927 ERGDLIKFYNTIYVGRVKSFALKYDLSNHDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 984
Query: 553 KHETSPGQNGDIRSPK 568
SP +NG +P+
Sbjct: 985 SIYVSPHKNGSGPTPR 1000
>UNIPROTKB|E1BMR3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 EMBL:DAAA02036543
EMBL:DAAA02036542 EMBL:DAAA02036544 IPI:IPI00693192
RefSeq:NP_001179531.1 UniGene:Bt.26367 Ensembl:ENSBTAT00000015333
GeneID:524870 KEGG:bta:524870 NextBio:20874052 Uniprot:E1BMR3
Length = 1068
Score = 281 (104.0 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 121/524 (23%), Positives = 228/524 (43%)
Query: 2 KLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREF 61
KL+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ +
Sbjct: 95 KLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDI 146
Query: 62 FL-----PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 116
F P ++ S + + F W LF+ + + DLV + L+
Sbjct: 147 FQNPYEEPPKLPRSRKQRRIPCS--VKELFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 117 ILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 166
L ++ I P R F+ + + + S + +I LC ++D + +
Sbjct: 205 CLDLIFANAIMCPNRQELLNPSFKGLPSNFQTADFRASEEPPCIIPVLCELHDGLLVEAK 264
Query: 167 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKD 225
I E I+ + +K + EC L+ + K+
Sbjct: 265 GIKEHYFKPYISKLFDRKILKG-EC------------------LLDLCSFTDNSKAVNKE 305
Query: 226 YDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH 285
Y+ G+ DER+F+ D G K + A+ +
Sbjct: 306 YEEYVLTVGDFDERIFLGADAEEEIGTPRKFTG---DGPLGKLTAQANVECNLQHHFEKK 362
Query: 286 RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD 343
S A S P G + V+TPV++A + L++++ L + PS +L +SC ++
Sbjct: 363 TSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRN 422
Query: 344 VTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 403
++M+ I++ I + T G+++ D +A R A LYY++LE +
Sbjct: 423 PMENIMK----IVKGIGETFCQHYTQSTDEQPGSHI-D--FAVNRLKLAEILYYKILETV 475
Query: 404 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLS 463
E + LH +++ LL + FH ++AC E+VL + + FP ++E + F
Sbjct: 476 MVQETRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFY 534
Query: 464 KVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 535 KVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 219 (82.2 bits), Expect = 3.9e-38, Sum P(2) = 3.9e-38
Identities = 73/253 (28%), Positives = 119/253 (47%)
Query: 629 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 687
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 688 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA-------SARQSGRSEQ 740
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + S +G E
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYSKNLNGDFEM 904
Query: 741 DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKV 793
D+ K + P+ E G T V V +N +P +
Sbjct: 905 TDCDLEDA-TKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVMEAPPL 963
Query: 794 SVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 851
S FP + SP+++S H++YVSP K + ++ S Y G SPSK
Sbjct: 964 SPFPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG-------SPSKS 1013
Query: 852 LTDINHRLNSNRR 864
L DIN+ + +
Sbjct: 1014 LKDINNMIRQGEQ 1026
Score = 40 (19.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 20/106 (18%), Positives = 43/106 (40%)
Query: 273 SPVKTITSP---LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP 329
+P +IT+ +SP S + I G T V P+ A + + + +
Sbjct: 684 APSSSITAENISISPGHSLLTMATAIVAGTTGHKVTIPLHGIANDAGEITLIPISMNTTQ 743
Query: 330 SAELERFLKSCDKDVTTDVMRRAHII-LEAIFPSSGLGERCVTGSL 374
+++E + + + ++ H+ + + P G+ + TGSL
Sbjct: 744 ESKVESPVSLTAQSLIGASPKQTHLTKAQEVHPI-GISKPKRTGSL 788
Score = 39 (18.8 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 498 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 552
E+G YN++ V R L +++ + + P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 553 KHETSPGQNGDIRSPK 568
SP +NG +P+
Sbjct: 984 SIYVSPHKNGSGLTPR 999
Score = 37 (18.1 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 15/59 (25%), Positives = 19/59 (32%)
Query: 801 DMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYAC---VGESTHAYQSPSKDLTDIN 856
DM P + H Y SP S L + E T +PS +T N
Sbjct: 635 DMQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEILMDRIITEGTKLKIAPSSSITAEN 693
>UNIPROTKB|Q9BDQ3 [details] [associations]
symbol:RB1 "Retinoblastoma protein 1" species:9598 "Pan
troglodytes" [GO:0005634 "nucleus" evidence=ISS] [GO:0006469
"negative regulation of protein kinase activity" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019900 "kinase binding"
evidence=ISS] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISS] [GO:0045445 "myoblast differentiation" evidence=ISS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0006469 GO:GO:0016605 GO:GO:0019900 GO:GO:0051726
GO:GO:0008134 GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
HSSP:P06400 HOGENOM:HOG000136539 HOVERGEN:HBG008967
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OrthoDB:EOG4TXBRB
EMBL:AH010623 ProteinModelPortal:Q9BDQ3 STRING:Q9BDQ3
InParanoid:Q9BDQ3 Uniprot:Q9BDQ3
Length = 882
Score = 256 (95.2 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 67/212 (31%), Positives = 111/212 (52%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---S 362
TPV T M T + L ++ +PS L + +C + +++R I IF +
Sbjct: 327 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFA 385
Query: 363 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 422
+G+ CV I +++ +L ++LYYRV+E+M +E + L +N + LL +
Sbjct: 386 KAVGQGCV-----------EIGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLND 433
Query: 423 ERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHE 473
FH +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E
Sbjct: 434 NIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAE 493
Query: 474 ESLPRELRRHLNSLEERLLESMVWEKGSSMYN 505
+L RE+ +HL E R++ES+ W S +++
Sbjct: 494 GNLTREMIKHLERCEHRIMESLAWLSDSPLFD 525
Score = 208 (78.3 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 55/188 (29%), Positives = 101/188 (53%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 599 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 657
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 658 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 707
Query: 747 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC--PGSP-KV---SVFPALP 800
FYN +F+ +K +++ A T T +S + H P P SP ++ +++ + P
Sbjct: 708 VFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPHIPRSPYKFPSSPLRIPGGNIYIS-P 762
Query: 801 DMSPKKVS 808
SP K+S
Sbjct: 763 LKSPYKIS 770
Score = 71 (30.1 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+++ II FYN +F+ +K +++ A T T +S + H P SP FP+
Sbjct: 700 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYK--FPS 748
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP ++ N+Y+SPL++
Sbjct: 749 ----SPLRIPGG-NIYISPLKS 765
Score = 65 (27.9 bits), Expect = 2.1e-36, Sum P(3) = 2.1e-36
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 222 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEE 277
Query: 229 ATRNKGELDERVFINED 245
+LD R+F++ D
Sbjct: 278 IYLKNKDLDARLFLDHD 294
Score = 40 (19.1 bits), Expect = 8.5e-34, Sum P(3) = 8.5e-34
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 214 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 248
>UNIPROTKB|P06400 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0048667 "cell
morphogenesis involved in neuron differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051146 "striated muscle cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051402
"neuron apoptotic process" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016605 "PML body" evidence=IDA] [GO:0043550 "regulation of
lipid kinase activity" evidence=IDA] [GO:0019900 "kinase binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0050681 "androgen receptor
binding" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;TAS] [GO:0045445
"myoblast differentiation" evidence=IMP] [GO:0006469 "negative
regulation of protein kinase activity" evidence=IPI] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0001047 "core promoter binding" evidence=IDA] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000785
"chromatin" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0090230 "regulation of centromere
complex assembly" evidence=TAS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0035189 "Rb-E2F complex"
evidence=TAS] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=TAS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0045892 GO:GO:0007265 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0045893 GO:GO:0030521 GO:GO:0051301 GO:GO:0030308
GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 EMBL:CH471075
GO:GO:0045944 GO:GO:0051402 GO:GO:0000785 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0006338 GO:GO:0019900
GO:GO:0003713 GO:GO:0016514 GO:GO:0001047 GO:GO:0043433
GO:GO:0051146 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0000084 GO:GO:0050680 GO:GO:0050681 GO:GO:0045749
GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0031134 GO:GO:0000080
Pathway_Interaction_DB:foxm1pathway GO:GO:0000083 GO:GO:0045651
DrugBank:DB00047 DrugBank:DB00046 DrugBank:DB00030 DrugBank:DB00071
GO:GO:0071922 Reactome:REACT_383 PDB:1H25 PDBsum:1H25 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0031575 GO:GO:0035189
GO:GO:0043353 MIM:259500 GO:GO:0034088 PDB:2R7G PDBsum:2R7G
GO:GO:0071930 PDB:1O9K PDB:2AZE PDBsum:1O9K PDBsum:2AZE PDB:1N4M
PDBsum:1N4M GO:GO:0048667 MIM:109800 EMBL:L11910 EMBL:AF551763
EMBL:AL392048 PDB:1GH6 PDBsum:1GH6 PDB:3N5U PDBsum:3N5U
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 CTD:5925 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:M15400
EMBL:M28419 EMBL:M33647 EMBL:L41870 EMBL:M27866 EMBL:M27845
EMBL:M27846 EMBL:M27847 EMBL:M27849 EMBL:M27850 EMBL:M27851
EMBL:L35146 EMBL:M27852 EMBL:M27853 EMBL:M27854 EMBL:M27855
EMBL:M27856 EMBL:M27857 EMBL:M27858 EMBL:M27859 EMBL:M27860
EMBL:L35147 EMBL:M27862 EMBL:M27863 EMBL:M27864 EMBL:M27865
EMBL:L41889 EMBL:L41890 EMBL:L41891 EMBL:L41893 EMBL:L41894
EMBL:L41895 EMBL:L41896 EMBL:L41897 EMBL:L41898 EMBL:L41899
EMBL:L41997 EMBL:X16439 EMBL:AK291258 EMBL:AL136960 EMBL:BC039060
EMBL:BC040540 IPI:IPI00302829 PIR:JS0276 RefSeq:NP_000312.2
UniGene:Hs.408528 PDB:1AD6 PDB:1GUX PDB:1PJM PDB:2QDJ PDB:3POM
PDB:4ELJ PDB:4ELL PDBsum:1AD6 PDBsum:1GUX PDBsum:1PJM PDBsum:2QDJ
PDBsum:3POM PDBsum:4ELJ PDBsum:4ELL ProteinModelPortal:P06400
SMR:P06400 DIP:DIP-582N IntAct:P06400 MINT:MINT-98847 STRING:P06400
PhosphoSite:P06400 DMDM:132164 PaxDb:P06400 PeptideAtlas:P06400
PRIDE:P06400 DNASU:5925 Ensembl:ENST00000267163 GeneID:5925
KEGG:hsa:5925 UCSC:uc001vcb.3 GeneCards:GC13P048877 HGNC:HGNC:9884
HPA:CAB000095 HPA:CAB016687 MIM:180200 MIM:614041
neXtProt:NX_P06400 Orphanet:790 PharmGKB:PA295 InParanoid:P06400
OMA:TNILQYA OrthoDB:EOG4TXBRB PhylomeDB:P06400 BindingDB:P06400
ChEMBL:CHEMBL5288 ChiTaRS:RB1 EvolutionaryTrace:P06400
GenomeRNAi:5925 NextBio:23076 PMAP-CutDB:P06400 ArrayExpress:P06400
Bgee:P06400 CleanEx:HS_RB1 Genevestigator:P06400
GermOnline:ENSG00000139687 GO:GO:0090230 Uniprot:P06400
Length = 928
Score = 256 (95.2 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 67/212 (31%), Positives = 111/212 (52%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---S 362
TPV T M T + L ++ +PS L + +C + +++R I IF +
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFA 431
Query: 363 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 422
+G+ CV I +++ +L ++LYYRV+E+M +E + L +N + LL +
Sbjct: 432 KAVGQGCV-----------EIGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLND 479
Query: 423 ERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHE 473
FH +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E
Sbjct: 480 NIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAE 539
Query: 474 ESLPRELRRHLNSLEERLLESMVWEKGSSMYN 505
+L RE+ +HL E R++ES+ W S +++
Sbjct: 540 GNLTREMIKHLERCEHRIMESLAWLSDSPLFD 571
Score = 208 (78.3 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 55/188 (29%), Positives = 101/188 (53%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 703
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 704 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 753
Query: 747 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC--PGSP-KV---SVFPALP 800
FYN +F+ +K +++ A T T +S + H P P SP ++ +++ + P
Sbjct: 754 VFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPHIPRSPYKFPSSPLRIPGGNIYIS-P 808
Query: 801 DMSPKKVS 808
SP K+S
Sbjct: 809 LKSPYKIS 816
Score = 71 (30.1 bits), Expect = 4.1e-22, Sum P(3) = 4.1e-22
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+++ II FYN +F+ +K +++ A T T +S + H P SP FP+
Sbjct: 746 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYK--FPS 794
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP ++ N+Y+SPL++
Sbjct: 795 ----SPLRIPGG-NIYISPLKS 811
Score = 65 (27.9 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 268 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEE 323
Query: 229 ATRNKGELDERVFINED 245
+LD R+F++ D
Sbjct: 324 IYLKNKDLDARLFLDHD 340
Score = 40 (19.1 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 260 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 294
>UNIPROTKB|F1RK14 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:CU457728
EMBL:CU406986 RefSeq:XP_001926888.4 Ensembl:ENSSSCT00000010300
GeneID:100151828 KEGG:ssc:100151828 Uniprot:F1RK14
Length = 938
Score = 262 (97.3 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 69/215 (32%), Positives = 114/215 (53%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV T M T + L ++ +PS L + +C + +++R I IF
Sbjct: 382 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFK---- 436
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E+ QG M+ I +++ +L ++LYYRV+E+M +E + L +N + LL + F
Sbjct: 437 -EQFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIF 491
Query: 426 HRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESL 476
H +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 492 HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL 551
Query: 477 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 511
RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 552 TREMIKHLERCEHRIMESLAWRSDSPLFDLIKQAK 586
Score = 192 (72.6 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 655 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 713
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 714 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 763
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 764 VFYNSVFMQRLKTNILQ 780
Score = 72 (30.4 bits), Expect = 5.4e-36, Sum P(3) = 5.4e-36
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 277 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSKQYEE 332
Query: 229 ATRNKGELDERVFINED 245
+LD R+F+N D
Sbjct: 333 IYLKNKDLDARLFLNHD 349
Score = 63 (27.2 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 797
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 756 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 803
Query: 798 ALPDMSPKKVSATHNVYVSPLR 819
SP ++ N+Y+SPL+
Sbjct: 804 ----SSPLRIPGG-NIYISPLK 820
Score = 40 (19.1 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 269 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 303
Score = 39 (18.8 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 812 NVYVSPLRTSKMDALISH-SSKSYYACVGESTHAYQSPSK 850
++Y+SPLR+ K + +S + ST Q P K
Sbjct: 614 DMYLSPLRSPKKKGSTTRVNSTANSEAQATSTFQTQKPLK 653
>UNIPROTKB|F1NV90 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00818985 Ensembl:ENSGALT00000027459
ArrayExpress:F1NV90 Uniprot:F1NV90
Length = 881
Score = 263 (97.6 bits), Expect = 6.4e-36, Sum P(3) = 6.4e-36
Identities = 85/281 (30%), Positives = 136/281 (48%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 321 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 378
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 424
E G QG I ++ R + ++LYYRV+E+M +E + L N + LL +
Sbjct: 379 AE--AVG--QGCA---EIGSQASRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNI 431
Query: 425 FHRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHE 473
FH +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 432 FHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVE 491
Query: 474 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--L 531
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L
Sbjct: 492 PSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTL 544
Query: 532 DAIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 570
+ H N ++ L SPV S K + Q+G +P
Sbjct: 545 NLPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 584
Score = 188 (71.2 bits), Expect = 6.4e-36, Sum P(3) = 6.4e-36
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 597 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 655
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 656 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 705
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 706 VFYNLVFMQKLKTNILQ 722
Score = 75 (31.5 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 698 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 742
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP++V A +N+Y+SPL++
Sbjct: 743 QFSNSPRRVPAGNNIYISPLKS 764
Score = 73 (30.8 bits), Expect = 6.4e-36, Sum P(3) = 6.4e-36
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 172 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 229
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 217 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 272
Query: 230 TRNKGELDERVFINEDD 246
++D R+F++ D+
Sbjct: 273 YLKNKDIDARLFLDHDE 289
Score = 38 (18.4 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 282 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 313
LSP RS +G TS P +T+ T
Sbjct: 559 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 590
>UNIPROTKB|E1BZL8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00682055 Ensembl:ENSGALT00000030147
ArrayExpress:E1BZL8 Uniprot:E1BZL8
Length = 902
Score = 263 (97.6 bits), Expect = 7.2e-36, Sum P(3) = 7.2e-36
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 356 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 413
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 414 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 465
Query: 426 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 474
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 466 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 525
Query: 475 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 532
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 526 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 578
Query: 533 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 570
H N ++ L SPV S K + Q+G +P
Sbjct: 579 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 617
Score = 188 (71.2 bits), Expect = 7.2e-36, Sum P(3) = 7.2e-36
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 630 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 688
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 689 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 738
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 739 VFYNLVFMQKLKTNILQ 755
Score = 75 (31.5 bits), Expect = 3.6e-24, Sum P(3) = 3.6e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 731 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 775
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP++V A +N+Y+SPL++
Sbjct: 776 QFSNSPRRVPAGNNIYISPLKS 797
Score = 73 (30.8 bits), Expect = 7.2e-36, Sum P(3) = 7.2e-36
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 172 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 229
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 252 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 307
Query: 230 TRNKGELDERVFINEDD 246
++D R+F++ D+
Sbjct: 308 YLKNKDIDARLFLDHDE 324
Score = 38 (18.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 282 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 313
LSP RS +G TS P +T+ T
Sbjct: 592 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 623
>UNIPROTKB|E1C0H8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00821844 Ensembl:ENSGALT00000036485
ArrayExpress:E1C0H8 Uniprot:E1C0H8
Length = 908
Score = 263 (97.6 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 362 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 419
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 420 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 471
Query: 426 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 474
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 472 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 531
Query: 475 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 532
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 532 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 584
Query: 533 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 570
H N ++ L SPV S K + Q+G +P
Sbjct: 585 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 623
Score = 188 (71.2 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 636 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 694
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 695 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 744
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 745 VFYNLVFMQKLKTNILQ 761
Score = 75 (31.5 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 737 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 781
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP++V A +N+Y+SPL++
Sbjct: 782 QFSNSPRRVPAGNNIYISPLKS 803
Score = 73 (30.8 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 172 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 229
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 258 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 313
Query: 230 TRNKGELDERVFINEDD 246
++D R+F++ D+
Sbjct: 314 YLKNKDIDARLFLDHDE 330
Score = 38 (18.4 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 282 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 313
LSP RS +G TS P +T+ T
Sbjct: 598 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 629
Score = 37 (18.1 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 286 RSSASHPNGIAGGATSKMVVTPVS 309
RS + P G AG A+ PVS
Sbjct: 13 RSQRTSPEGGAGTASPPGGTAPVS 36
>UNIPROTKB|F1NAY3 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00592698
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AADN02005407
EMBL:AADN02005408 EMBL:AADN02005409 Ensembl:ENSGALT00000036484
ArrayExpress:F1NAY3 Uniprot:F1NAY3
Length = 920
Score = 263 (97.6 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 85/281 (30%), Positives = 136/281 (48%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 360 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 417
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 424
E G QG I ++ R + ++LYYRV+E+M +E + L N + LL +
Sbjct: 418 AE--AVG--QGCA---EIGSQASRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNI 470
Query: 425 FHRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHE 473
FH +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 471 FHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVE 530
Query: 474 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--L 531
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L
Sbjct: 531 PSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTL 583
Query: 532 DAIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 570
+ H N ++ L SPV S K + Q+G +P
Sbjct: 584 NLPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 623
Score = 188 (71.2 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 636 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 694
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 695 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 744
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 745 VFYNLVFMQKLKTNILQ 761
Score = 75 (31.5 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 737 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 781
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP++V A +N+Y+SPL++
Sbjct: 782 QFSNSPRRVPAGNNIYISPLKS 803
Score = 73 (30.8 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 172 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 229
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 256 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 311
Query: 230 TRNKGELDERVFINEDD 246
++D R+F++ D+
Sbjct: 312 YLKNKDIDARLFLDHDE 328
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 282 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 313
LSP RS +G TS P +T+ T
Sbjct: 598 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 629
>UNIPROTKB|Q90600 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0019048 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030
Pfam:PF08934 HSSP:P06400 EMBL:X72218 EMBL:U00113 EMBL:X72217
IPI:IPI00592698 PIR:S45298 RefSeq:NP_989750.1 UniGene:Gga.2986
ProteinModelPortal:Q90600 SMR:Q90600 STRING:Q90600 GeneID:386582
KEGG:gga:386582 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 NextBio:20813945 InterPro:IPR015652
PANTHER:PTHR13742:SF10 Uniprot:Q90600
Length = 921
Score = 263 (97.6 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 363 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 420
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 421 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 472
Query: 426 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 474
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 473 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 532
Query: 475 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 532
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 533 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 585
Query: 533 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 570
H N ++ L SPV S K + Q+G +P
Sbjct: 586 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 624
Score = 188 (71.2 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 637 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 695
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 696 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 745
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 746 VFYNLVFMQKLKTNILQ 762
Score = 75 (31.5 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 738 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 782
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP++V A +N+Y+SPL++
Sbjct: 783 QFSNSPRRVPAGNNIYISPLKS 804
Score = 73 (30.8 bits), Expect = 7.9e-36, Sum P(3) = 7.9e-36
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 172 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 229
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 259 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 314
Query: 230 TRNKGELDERVFINEDD 246
++D R+F++ D+
Sbjct: 315 YLKNKDIDARLFLDHDE 331
Score = 38 (18.4 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 282 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 313
LSP RS +G TS P +T+ T
Sbjct: 599 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 630
>UNIPROTKB|F1NAY1 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0031134 "sister chromatid
biorientation" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0034088 "maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0035189 "Rb-E2F complex"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0043550 "regulation of lipid kinase activity" evidence=IEA]
[GO:0045445 "myoblast differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051146 "striated
muscle cell differentiation" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0071922 "regulation of cohesin
localization to chromatin" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0071459 GO:GO:0050680
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0035189 GO:GO:0034088
GO:GO:0071930 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AADN02005407 EMBL:AADN02005408 EMBL:AADN02005409
IPI:IPI00819754 Ensembl:ENSGALT00000036486 ArrayExpress:F1NAY1
Uniprot:F1NAY1
Length = 962
Score = 263 (97.6 bits), Expect = 9.7e-36, Sum P(3) = 9.7e-36
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 416 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 473
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 474 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 525
Query: 426 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 474
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 526 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 585
Query: 475 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 532
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 586 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 638
Query: 533 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 570
H N ++ L SPV S K + Q+G +P
Sbjct: 639 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 677
Score = 188 (71.2 bits), Expect = 9.7e-36, Sum P(3) = 9.7e-36
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 690 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 748
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 749 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 798
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 799 VFYNLVFMQKLKTNILQ 815
Score = 75 (31.5 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 798
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 791 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 835
Query: 799 LPDMSPKKVSATHNVYVSPLRT 820
SP++V A +N+Y+SPL++
Sbjct: 836 QFSNSPRRVPAGNNIYISPLKS 857
Score = 73 (30.8 bits), Expect = 9.7e-36, Sum P(3) = 9.7e-36
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 172 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 229
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 312 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 367
Query: 230 TRNKGELDERVFINEDD 246
++D R+F++ D+
Sbjct: 368 YLKNKDIDARLFLDHDE 384
Score = 38 (18.4 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 282 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 313
LSP RS +G TS P +T+ T
Sbjct: 652 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 683
>UNIPROTKB|F1MD46 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:DAAA02032883
EMBL:DAAA02032882 EMBL:DAAA02032884 EMBL:DAAA02032885
IPI:IPI00703019 UniGene:Bt.47780 Ensembl:ENSBTAT00000008728
Uniprot:F1MD46
Length = 928
Score = 260 (96.6 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 82/282 (29%), Positives = 142/282 (50%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV T M T + L ++ +PS L + +C + +++R I + +F
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKDSILKRVKDIGD-VFK---- 427
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E+ QG M+ I +++ +L ++LYYRV+E+M +E + L +N + LL + F
Sbjct: 428 -EKFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIF 482
Query: 426 HRCMLACSAELVLATHK--------TVTML-FPAVLERTGITAFDLSKVIESFIRHEESL 476
H +LAC+ E+V+AT+ T T L FP +L + AFD KVIESFI+ E +L
Sbjct: 483 HMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAEANL 542
Query: 477 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIAT 536
RE+ +HL E R++ES+ W S +++ + A+ ++ +P +L+ +
Sbjct: 543 TREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKD-REGPVDHF----EPACTLN-LPL 596
Query: 537 HINFSSGG--LSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 576
N ++ LSPV S K +P N S + + +++
Sbjct: 597 QNNHTAADMYLSPVRSPKKKGPTPRVNSTPNSEAQATSAFQT 638
Score = 192 (72.6 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 703
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 704 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 753
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 754 VFYNSVFMQRLKTNILQ 770
Score = 67 (28.6 bits), Expect = 2.8e-35, Sum P(3) = 2.8e-35
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 268 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVENLSKQYEE 323
Query: 229 ATRNKGELDERVFINED 245
+LD R+F++ D
Sbjct: 324 IYLKNKDLDARLFLDHD 340
Score = 61 (26.5 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 797
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 746 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 793
Query: 798 ALPDMSPKKVSATHNVYVSPL 818
SP ++ N+Y+SPL
Sbjct: 794 ----SSPLRIPGG-NIYISPL 809
Score = 40 (19.1 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 260 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 294
Score = 39 (18.8 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 460 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 519
FDL K I++ + + ++ R L+++ N L L S + +Y LT +S EIN
Sbjct: 132 FDLLKEIDTSTKVDNAMSRLLKKY-NVL--CALYSKLERTCELIY--LTQPSSSISTEIN 186
Query: 520 RLGLL 524
+ +L
Sbjct: 187 SMLVL 191
>MGI|MGI:97874 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10090 "Mus musculus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IMP]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO;IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016605 "PML body" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0019900 "kinase
binding" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031134 "sister chromatid biorientation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=ISO] [GO:0035189 "Rb-E2F complex" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0042551 "neuron maturation" evidence=IMP] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IGI] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO] [GO:0045445
"myoblast differentiation" evidence=ISO] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IGI] [GO:0045786
"negative regulation of cell cycle" evidence=IMP] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=ISO] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IMP;IDA] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048667 "cell morphogenesis involved
in neuron differentiation" evidence=IMP] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IMP]
[GO:0051146 "striated muscle cell differentiation" evidence=IGI]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0051301
"cell division" evidence=IMP] [GO:0051402 "neuron apoptotic
process" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IGI] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 MGI:MGI:97874
GO:GO:0007265 GO:GO:0051301 GO:GO:0005819 GO:GO:0006469
GO:GO:0016605 GO:GO:0045944 GO:GO:0051402 GO:GO:0007050
GO:GO:0006351 GO:GO:0016568 GO:GO:0019900 GO:GO:0001047
GO:GO:0008134 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0050680 GO:GO:0035914 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0035189 GO:GO:0043353
GO:GO:0034088 GO:GO:0071930 GO:GO:0048667 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925
HOGENOM:HOG000136539 HOVERGEN:HBG008967 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:M26391 EMBL:DQ400415 EMBL:BC096525
IPI:IPI00121418 PIR:A33718 RefSeq:NP_033055.2 UniGene:Mm.273862
ProteinModelPortal:P13405 SMR:P13405 DIP:DIP-37637N IntAct:P13405
MINT:MINT-225292 STRING:P13405 PhosphoSite:P13405 PaxDb:P13405
PRIDE:P13405 Ensembl:ENSMUST00000022701 GeneID:19645 KEGG:mmu:19645
InParanoid:Q4VA62 NextBio:296890 Bgee:P13405 CleanEx:MM_RB1
Genevestigator:P13405 GermOnline:ENSMUSG00000022105 Uniprot:P13405
Length = 921
Score = 264 (98.0 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 67/213 (31%), Positives = 113/213 (53%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA----HIILEAIFP 361
TPV T M T + L ++ +PS L + +C + ++++R HI E
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKF-- 424
Query: 362 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 421
++ +G+ CV +I ++ +L ++LYYRV+E+M +E + L +N + LL
Sbjct: 425 ANAVGQGCV-----------DIGVQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLN 472
Query: 422 NERFHRCMLACSAELVLATHKTVTML---------FPAVLERTGITAFDLSKVIESFIRH 472
+ FH +LAC+ E+V+AT+ T+ FP +L + AFD KVIESFI+
Sbjct: 473 DNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKV 532
Query: 473 EESLPRELRRHLNSLEERLLESMVWEKGSSMYN 505
E +L RE+ +HL E R++ES+ W S +++
Sbjct: 533 EANLTREMIKHLERCEHRIMESLAWLSDSPLFD 565
Score = 189 (71.6 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 67/272 (24%), Positives = 118/272 (43%)
Query: 546 SPVHSLHKHETSPGQNGDIRSPKRPCT-DYRSVLVERNNFTSPVKD-RXXXXXXXXXXXX 603
SP+ L K ++ G+ D P P + + + + SP++ +
Sbjct: 561 SPLFDLIK-QSKDGEGPDNLEPACPLSLPLQGNHTAADMYLSPLRSPKKRTSTTRVNSAA 619
Query: 604 XXXXQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRE 661
Q+A A T+ + T + +F+ K+ +LA +R+N + RL LS ++
Sbjct: 620 NTETQAASAFHTQ-------KPLKSTSLALFYKKVYRLAYLRLNTLCARL-LSDHPELEH 671
Query: 662 SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQV 721
++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P +
Sbjct: 672 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQET 731
Query: 722 FRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH 781
F+ V + E++ II FYN +F+ +K +++ A T T +S + H
Sbjct: 732 FKRVLI----------REEEFDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH 777
Query: 782 NNDGPCPGSPKVSVFPA-----LPDMSPKKVS 808
P S P P SP K+S
Sbjct: 778 IPRSPYKFSSSPLRIPGGNIYISPLKSPYKIS 809
Score = 65 (27.9 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 262 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEE 317
Query: 229 ATRNKGELDERVFINED 245
+LD R+F++ D
Sbjct: 318 VYLKNKDLDARLFLDHD 334
Score = 61 (26.5 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 797
E++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 739 EEEFDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 786
Query: 798 ALPDMSPKKVSATHNVYVSPLRT 820
SP ++ N+Y+SPL++
Sbjct: 787 ----SSPLRIPGG-NIYISPLKS 804
Score = 43 (20.2 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 779 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH-NVYVSPLRTSK 822
+ + DG P + + PA P P + + T ++Y+SPLR+ K
Sbjct: 567 IKQSKDGEGPDNLE----PACPLSLPLQGNHTAADMYLSPLRSPK 607
Score = 43 (20.2 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 460 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 519
FDL K I++ + + ++ R L+++ N L L S + +Y LT LS EIN
Sbjct: 126 FDLLKEIDTSTKVDNAMSRLLKKY-NVL--CALYSKLERTCELIY--LTQPSSALSTEIN 180
Query: 520 RLGLL 524
+ +L
Sbjct: 181 SMLVL 185
Score = 40 (19.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 254 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 288
>RGD|3540 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10116 "Rattus norvegicus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=IEA;ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO;ISS] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0007265 "Ras protein signal
transduction" evidence=IEA;ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO;ISS] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019900 "kinase binding"
evidence=ISO;ISS] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0031134 "sister chromatid biorientation" evidence=IEA;ISO]
[GO:0031175 "neuron projection development" evidence=IEA;ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA;ISO] [GO:0035189 "Rb-E2F complex" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0042551 "neuron maturation" evidence=IEA;ISO] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA;ISO] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO;ISS] [GO:0045445
"myoblast differentiation" evidence=ISO;ISS] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IEA;ISO]
[GO:0045786 "negative regulation of cell cycle" evidence=ISO]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA;ISO] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048565 "digestive tract development"
evidence=IEA;ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA;ISO] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA;ISO] [GO:0051146
"striated muscle cell differentiation" evidence=IEA;ISO] [GO:0051219
"phosphoprotein binding" evidence=IEA;ISO] [GO:0051301 "cell
division" evidence=IEA;ISO] [GO:0051402 "neuron apoptotic process"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA;ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=IEA;ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA;ISO] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 RGD:3540 GO:GO:0007265
GO:GO:0051301 GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 GO:GO:0045944
GO:GO:0051402 GO:GO:0007050 GO:GO:0006351 GO:GO:0016568 GO:GO:0019900
GO:GO:0001047 GO:GO:0008134 GO:GO:0051146 GO:GO:0031175 GO:GO:0048565
GO:GO:0071459 GO:GO:0050680 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842 GO:GO:0045879
GO:GO:0042551 GO:GO:0035189 GO:GO:0043353 GO:GO:0034088 GO:GO:0071930
GO:GO:0048667 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030
Pfam:PF08934 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:D25233 EMBL:L07126 IPI:IPI00192561 PIR:S35544
RefSeq:NP_058741.1 UniGene:Rn.55115 IntAct:P33568 STRING:P33568
PhosphoSite:P33568 PRIDE:P33568 Ensembl:ENSRNOT00000021752
GeneID:24708 KEGG:rno:24708 UCSC:RGD:3540 InParanoid:P33568
NextBio:604187 Genevestigator:P33568 GermOnline:ENSRNOG00000016029
Uniprot:P33568
Length = 920
Score = 266 (98.7 bits), Expect = 8.2e-35, Sum P(3) = 8.2e-35
Identities = 69/214 (32%), Positives = 115/214 (53%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA----HIILEAIFP 361
TPV T M T + L ++ +PS L + +C + ++++R HI E
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKF-- 423
Query: 362 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 421
+S +G+ C+ +I A++ +L ++LYYRV+E+M +E + L +N + LL
Sbjct: 424 ASAVGQGCI-----------DIGAQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLN 471
Query: 422 NERFHRCMLACSAELVLATHKTVTML----------FPAVLERTGITAFDLSKVIESFIR 471
+ FH +LAC+ E+V+AT+ +ML FP +L + AFD KVIESFI+
Sbjct: 472 DNIFHMSLLACALEVVMATYSR-SMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIK 530
Query: 472 HEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 505
E +L RE+ +HL E R++ES+ W S +++
Sbjct: 531 VEANLTREMIKHLERCEHRIMESLAWLSDSPLFD 564
Score = 191 (72.3 bits), Expect = 8.2e-35, Sum P(3) = 8.2e-35
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 637 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLENEYELMKDRHLDQI 695
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E++ II
Sbjct: 696 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSII 745
Query: 747 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA-----LPD 801
FYN +F+ +K +++ A T T +S + H P S P P
Sbjct: 746 VFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPHIPRSPYKFSSSPLRIPGGNIYISPL 801
Query: 802 MSPKKVS 808
SP K+S
Sbjct: 802 KSPYKIS 808
Score = 61 (26.5 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 797
E++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 738 EEEFDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 785
Query: 798 ALPDMSPKKVSATHNVYVSPLRT 820
SP ++ N+Y+SPL++
Sbjct: 786 ----SSPLRIPGG-NIYISPLKS 803
Score = 57 (25.1 bits), Expect = 8.2e-35, Sum P(3) = 8.2e-35
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 185 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDNATRNKGELDERVFI 242
C+ EC + ++N+ I F + + + L K Y+ +LD R+F+
Sbjct: 271 CKEHECNVDEVKNVYFKNFIPFISSLGIVSSNGLPELESLSKRYEEVYLKSKDLDARLFL 330
Query: 243 NED 245
+ D
Sbjct: 331 DHD 333
Score = 39 (18.8 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 460 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 519
FDL K I++ + + ++ R L+++ N L L S + +Y LT LS EIN
Sbjct: 125 FDLLKEIDTSTKVDNAVSRLLKKY-NVL--CALYSKLERTCGLIY--LTQPSSGLSTEIN 179
Query: 520 RLGLL 524
+ +L
Sbjct: 180 SMLVL 184
Score = 38 (18.4 bits), Expect = 7.7e-33, Sum P(3) = 7.7e-33
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ I LC ++ + D+++ + K
Sbjct: 253 SARIAKQLESDTRTIEVLCKEHECNVDEVKNVYFK 287
>UNIPROTKB|J9NU49 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AAEX03013115
EMBL:AAEX03013116 EMBL:AAEX03013117 EMBL:AAEX03013118
Ensembl:ENSCAFT00000045816 Uniprot:J9NU49
Length = 920
Score = 261 (96.9 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 68/215 (31%), Positives = 115/215 (53%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV T M T + L ++ +PS L + +C + +++R + IF
Sbjct: 365 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDV-GYIFK---- 419
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E+ QG M+ I +++ +L ++LYYRV+E+M +E + L +N + LL ++ F
Sbjct: 420 -EKFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIF 474
Query: 426 HRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESL 476
H +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 475 HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL 534
Query: 477 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 511
RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 535 TREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 569
Score = 192 (72.6 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 637 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 695
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 696 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 745
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 746 VFYNSVFMQRLKTNILQ 762
Score = 63 (27.2 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 797
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 738 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 785
Query: 798 ALPDMSPKKVSATHNVYVSPLR 819
SP ++ N+Y+SPL+
Sbjct: 786 ----SSPLRIPGG-NIYISPLK 802
Score = 60 (26.2 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 16/77 (20%), Positives = 33/77 (42%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L + Y+
Sbjct: 260 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSRQYEE 315
Query: 229 ATRNKGELDERVFINED 245
+ D R+F++ D
Sbjct: 316 IYLKNKDFDARLFLDHD 332
Score = 40 (19.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 252 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 286
Score = 38 (18.4 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 460 FDLSKVIESFIRHEESLPRELRRH-----LNSLEERLLESMVWEKGSSMYNS 506
FDL K I++ + + ++ R L+++ L S ER E + + SS+ ++
Sbjct: 124 FDLLKEIDTSTKVDNAMSRLLKKYDVLCALYSKLERTCELIYLTQPSSLIST 175
>UNIPROTKB|F1PQ32 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AAEX03013115 EMBL:AAEX03013116 EMBL:AAEX03013117
EMBL:AAEX03013118 Ensembl:ENSCAFT00000007150 Uniprot:F1PQ32
Length = 928
Score = 245 (91.3 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 66/215 (30%), Positives = 113/215 (52%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 365
TPV T M T + L ++ +PS L + +C + +++R + IF
Sbjct: 376 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDV-GYIFK---- 430
Query: 366 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 425
E+ QG M+ I +++ +L ++LYYRV+E+M + + +N + LL ++ F
Sbjct: 431 -EKFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSRLSI---QNFSKLLNDDIF 482
Query: 426 HRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESL 476
H +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 483 HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL 542
Query: 477 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 511
RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 543 TREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 577
Score = 192 (72.6 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 686
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 703
Query: 687 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 746
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 704 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 753
Query: 747 TFYNKIFVPAVKPLLVE 763
FYN +F+ +K +++
Sbjct: 754 VFYNSVFMQRLKTNILQ 770
Score = 63 (27.2 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 739 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 797
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 746 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 793
Query: 798 ALPDMSPKKVSATHNVYVSPLR 819
SP ++ N+Y+SPL+
Sbjct: 794 ----SSPLRIPGG-NIYISPLK 810
Score = 60 (26.2 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 16/77 (20%), Positives = 33/77 (42%)
Query: 171 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 228
+ +T I ++L C+ EC + ++N+ I F N + + L + Y+
Sbjct: 271 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSRQYEE 326
Query: 229 ATRNKGELDERVFINED 245
+ D R+F++ D
Sbjct: 327 IYLKNKDFDARLFLDHD 343
Score = 40 (19.1 bits), Expect = 8.0e-31, Sum P(3) = 8.0e-31
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 171
S+R K+ +I LC ++ + D+++ + K
Sbjct: 263 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 297
Score = 38 (18.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 460 FDLSKVIESFIRHEESLPRELRRH-----LNSLEERLLESMVWEKGSSMYNS 506
FDL K I++ + + ++ R L+++ L S ER E + + SS+ ++
Sbjct: 135 FDLLKEIDTSTKVDNAMSRLLKKYDVLCALYSKLERTCELIYLTQPSSLIST 186
>UNIPROTKB|F1NEZ1 [details] [associations]
symbol:F1NEZ1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 EMBL:AADN02038292 EMBL:AADN02038287
EMBL:AADN02038288 EMBL:AADN02038289 EMBL:AADN02038290
EMBL:AADN02038291 IPI:IPI00820273 Ensembl:ENSGALT00000039692
Uniprot:F1NEZ1
Length = 1120
Score = 293 (108.2 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 88/293 (30%), Positives = 144/293 (49%)
Query: 222 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 281
+ K Y+ + G LDER+F+ ED +N A V+ +
Sbjct: 333 INKAYEEYVLSVGNLDERIFLGED--ADEEIGTLTRCLNTPSGMET----AERVQ-VKHN 385
Query: 282 LSPHRSSASHPN---GIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 335
L H + P + G S VTPVS A + L T++ L + PS LE+
Sbjct: 386 LQQHFDRSKSPRVTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 445
Query: 336 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALK 394
++C +D + + R + E ++ S E + +NL ++ ++ RR E L
Sbjct: 446 IFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRRAEVL- 497
Query: 395 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 454
YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP + E
Sbjct: 498 -YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEI 555
Query: 455 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
I + KVIE FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 556 FDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 608
Score = 82 (33.9 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 847
+P +S +P++ SP++V S H VY+SP + + AL SH K +Y + S
Sbjct: 1012 TPPLSPYPSVRISSPRRVQLSQNHAVYISPHKN--VSAL-SHREKIFY-------YFSSS 1061
Query: 848 PSKDLTDINHRLNSNR---RVRGTL 869
PSK L +IN + + + RG L
Sbjct: 1062 PSKRLKEINSMIRTGETPTKKRGIL 1086
Score = 62 (26.9 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 735 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGT 769
S E++ D+I FYN I++ +K ++ +GT
Sbjct: 976 SDTEEEERGDLIQFYNSIYIEQIKEFALKYTSSGT 1010
Score = 40 (19.1 bits), Expect = 2.8e-26, Sum P(4) = 2.8e-26
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 655 LSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYN 710
LS Q+ + L Q+ Q + R Q+I K+ L+L FR+++++
Sbjct: 789 LSTQMSGATMQLPGQVTVQHITSGEPRPAQQLIAATATRSRKMGSLSLFFRKVLFS 844
>UNIPROTKB|F5H837 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 InterPro:IPR024599 Pfam:PF11934
HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342 IPI:IPI01011272
Ensembl:ENST00000544405 ArrayExpress:F5H837 Bgee:F5H837
Uniprot:F5H837
Length = 639
Score = 313 (115.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 130/498 (26%), Positives = 219/498 (43%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 87
R + L+ NF +++ K Y+ I+++ F P G KQ T +S+
Sbjct: 72 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCT---VSEIFH 128
Query: 88 FGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VPVRFRNFNIHD 136
F W+LF+ + + F D L+ C LV A+ + V F+ +
Sbjct: 129 FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDF 187
Query: 137 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 195
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 188 HAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENL 244
Query: 196 ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXX 255
G + E+ + K Y+ + G LDER+F+ ED
Sbjct: 245 TGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGED--AEEEIGTL 291
Query: 256 XXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSA---SHP-NGIAGGATSKMVVTPVS 309
+N + + +K I L H +S A S P G+ + VTPVS
Sbjct: 292 SRCLNAGSGTETAERVQ--MKNI---LQQHFDKSKALRISTPLTGVRYIKENSPCVTPVS 346
Query: 310 TAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERC 369
TA + L T++ L + PS +LE+ L++C +D T + R + E I+ +
Sbjct: 347 TATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-IYSQHFQPDE- 404
Query: 370 VTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 429
+N I ++ R + LYY+VLE++ E + L +L+ +L + FHR +
Sbjct: 405 -----DFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSL 458
Query: 430 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEE 489
LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE
Sbjct: 459 LACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEE 517
Query: 490 RLLESMVWEKGSSMYNSL 507
++L+ + W+ S ++ +
Sbjct: 518 QILDHLAWKPESPLWEKI 535
>DICTYBASE|DDB_G0290551 [details] [associations]
symbol:rblA "retinoblastoma-like protein"
species:44689 "Dictyostelium discoideum" [GO:0045165 "cell fate
commitment" evidence=IGI] [GO:0010628 "positive regulation of gene
expression" evidence=IMP] [GO:0051330 "G1 phase of meiotic cell
cycle" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=ISS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 dictyBase:DDB_G0290551
GenomeReviews:CM000154_GR GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0045786
EMBL:AAFI02000164 GO:GO:0030332 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 EMBL:AB211596 RefSeq:XP_635645.1
ProteinModelPortal:Q54FX2 EnsemblProtists:DDB0232004 GeneID:8627717
KEGG:ddi:DDB_G0290551 InParanoid:Q54FX2 OMA:AWCLLEN GO:GO:0051330
Uniprot:Q54FX2
Length = 1312
Score = 199 (75.1 bits), Expect = 2.1e-24, Sum P(5) = 2.1e-24
Identities = 54/214 (25%), Positives = 101/214 (47%)
Query: 296 AGGATSKMVVTPVSTAMTTAKWLRTVICPLPS-KPSAELERFLKSCDK-DVTTDVMRRAH 353
AG S + TP+S +T WL+ I PS L LKS D+ T++V +
Sbjct: 618 AGNLGSVIPQTPISLTLTLESWLKVEIQNYRDPNPSLNLINILKSADQPQQTSEVDKMIE 677
Query: 354 IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHA 413
+ + L Q ++R+ A++LYY +LE + E +
Sbjct: 678 RVSSLTNNTDSLFSIGGIDDHQQQQQQQQEVKQRRKNMAIQLYYCLLEKLIKFEQNT--S 735
Query: 414 KNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHE 473
N+ LL +E FH+ +L+ S E++ +K + FP + + F ++I+ ++ +
Sbjct: 736 SNINVLLNHEDFHKSLLSNSFEIIAYVYKMEGLYFPHFINVFKLHPFSYLRLIDLVLKVD 795
Query: 474 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
LP+ L +H + +EE++LE VW S++++++
Sbjct: 796 ADLPKLLAQHFSQIEEKILEKYVWSNNSTVFSTI 829
Score = 120 (47.3 bits), Expect = 2.1e-24, Sum P(5) = 2.1e-24
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 631 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 690
I F K++ L + ++ + LS +Y + +IL T LF NR ID +++C
Sbjct: 890 IQNFIKKVSTLIIAKCRKLIHAMGLSSDYVVQIYQVMIKILIDETLLFKNREIDVLLICS 949
Query: 691 FYGVAKISQLNLTFREIIYNYRKQPQC-KPQVFRSVFV 727
Y + K++ N+TF+ II C +V++ V++
Sbjct: 950 IYAICKVNSKNITFKAII-----DKSCISAKVYKEVYI 982
Score = 79 (32.9 bits), Expect = 2.1e-24, Sum P(5) = 2.1e-24
Identities = 39/165 (23%), Positives = 70/165 (42%)
Query: 89 GWLLFLALRIHAFSRFK-DLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKG 147
GWL+FL + F++ D V + L+ I+ + ++ + I + + + G
Sbjct: 370 GWLIFLFCKNKLFTKDSPDFVQSLHLLLCIINFIYVNTSISELK-KIPQGVQIIDTAT-G 427
Query: 148 VDLIASLCSIYDTSEDDLRKIMEK-----TNTLIAD-ILKKKPCEASECKSENLENIDTD 201
D++ L + DDL + + +N LI + ILK + + N N ++D
Sbjct: 428 -DILLYLAKSIPCNLDDLSNVNQNIFSTYSNLLINNSILKLFDNNNNNNNNNNNNNNNSD 486
Query: 202 GL-IYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINED 245
G+ F N N L K Y+ G++DER+F + D
Sbjct: 487 GIKSIFNN---SSIIKDNYNSLNKSYELYYYANGDIDERLFYSFD 528
Score = 57 (25.1 bits), Expect = 2.1e-24, Sum P(5) = 2.1e-24
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 744 DIITFYNKIFVPAVKPLLVEL 764
DII FYNKIF+ + P + E+
Sbjct: 1029 DIILFYNKIFLTKMDPYIHEV 1049
Score = 56 (24.8 bits), Expect = 2.1e-24, Sum P(5) = 2.1e-24
Identities = 27/95 (28%), Positives = 37/95 (38%)
Query: 769 TAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALIS 828
T K + N NN+ P S + + P S V +SP+ K IS
Sbjct: 1087 TPTKNQNNNPYNSNNNTPNKFSSSIPLSPQKGVNYNSSFSVNSMVTISPM---KQHTPIS 1143
Query: 829 HSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR 863
SS +Y +SPSK+L IN LN +
Sbjct: 1144 -SSYTYIVA--------KSPSKELFQINQCLNKKK 1169
Score = 55 (24.4 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 267 KFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLP 326
++ SL P T T+P S + SS+S G G + TP S +++ L +VI P
Sbjct: 574 QYSSLLPP-STPTTP-SRYGSSSSSGGGGGGNLRKNIYGTP-SKSLSAGN-LGSVIPQTP 629
Query: 327 SKPSAELERFLK 338
+ LE +LK
Sbjct: 630 ISLTLTLESWLK 641
Score = 45 (20.9 bits), Expect = 5.7e-05, Sum P(4) = 5.7e-05
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 410 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 448
+L L S+ T+E+F + ++ACS + K ++L+
Sbjct: 125 LLENMQLVSVDTSEQFQKQIVACSL-FICGNKKFSSLLY 162
Score = 40 (19.1 bits), Expect = 1.7e-20, Sum P(5) = 1.7e-20
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 33 NRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGD 70
N + +++ F + SI+ +Y + + + L ANGD
Sbjct: 481 NNNNSDGIKSIFNNSSIIKDNYNSLNKSYELYYYANGD 518
Score = 37 (18.1 bits), Expect = 5.5e-21, Sum P(4) = 5.5e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 774 NRVSEVNHNNDGPCPG 789
N +E N+NN+ P G
Sbjct: 1013 NNNNENNNNNNNPVKG 1028
>FB|FBgn0015799 [details] [associations]
symbol:Rbf "Retinoblastoma-family protein" species:7227
"Drosophila melanogaster" [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051101
"regulation of DNA binding" evidence=IDA] [GO:0051726 "regulation
of cell cycle" evidence=ISS;IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008156 "negative regulation of DNA
replication" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007307 "eggshell
chorion gene amplification" evidence=TAS] [GO:0007113 "endomitotic
cell cycle" evidence=TAS] [GO:0042023 "DNA endoreduplication"
evidence=IMP] [GO:0031523 "Myb complex" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0045749 "negative regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007095 GO:GO:0043066 GO:GO:0008630
GO:GO:0008285 EMBL:AE014298 GO:GO:0000785 GO:GO:0006351
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 GO:GO:0007113
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 GO:GO:0008156 GO:GO:0051101 GO:GO:0042023
GO:GO:0031523 GO:GO:0007307 GO:GO:0071922 GO:GO:0035189
GO:GO:0034088 Reactome:REACT_118133 EMBL:AL031583 ChiTaRS:Rb97D
EMBL:AY047549 EMBL:AY089532 EMBL:X96975 PIR:T13480
RefSeq:NP_525036.2 UniGene:Dm.4654 ProteinModelPortal:Q24472
SMR:Q24472 IntAct:Q24472 STRING:Q24472 PaxDb:Q24472
EnsemblMetazoa:FBtr0070146 GeneID:31027 KEGG:dme:Dmel_CG7413
CTD:31027 FlyBase:FBgn0015799 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InParanoid:Q24472 KO:K04681
OMA:CCIDLIY OrthoDB:EOG47D7X2 PhylomeDB:Q24472 GenomeRNAi:31027
NextBio:771579 Bgee:Q24472 GermOnline:CG7413 InterPro:IPR024599
Pfam:PF11934 Uniprot:Q24472
Length = 845
Score = 189 (71.6 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 631 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 690
+ IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQNIMCA 641
Query: 691 FYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 749
Y ++ ++ + F +I+ YR QPQ V+R VF+D + G E DII FY
Sbjct: 642 IYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFID---INEDG--EPKVKDIIHFY 696
Query: 750 NKIFVPAVKPLLVE 763
N +VP ++ +++
Sbjct: 697 NHTYVPLMRQFVID 710
Score = 169 (64.5 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 49/152 (32%), Positives = 81/152 (53%)
Query: 385 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 440
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 491
Query: 441 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 497
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 550
Query: 498 EKGSSMYNSLTVAR-PVLSAEINRLGLLADPM 528
+ S+++ + A+ P+ + + L A P+
Sbjct: 551 ARNSTVWEMIASAQLPLPTWLMVNLDRAAGPL 582
Score = 91 (37.1 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 718 KPQVFRSVFVD-WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRV 776
+PQ SV+ + + + G E DII FYN +VP ++ +++ T + R
Sbjct: 666 QPQAVNSVYREVFIDINEDG--EPKVKDIIHFYNHTYVPLMRQFVIDYLNV-TPDVSGRA 722
Query: 777 SEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYA 836
S++ ++S P PKKV+ +H+++VS + SK + S + Y
Sbjct: 723 SDL------------QLSPHPKERAAQPKKVTQSHSLFVSQM--SKNEIQQSPNQMVYSF 768
Query: 837 CVGESTHAYQSPSKDLTDINHRLNSNRRV 865
C +SP+KDL +N ++ +R+
Sbjct: 769 C--------RSPAKDLQAMNEKVRGGKRM 789
Score = 48 (22.0 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 58/251 (23%), Positives = 88/251 (35%)
Query: 36 EAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYIS----DYHRFG-- 89
E ++L F +L K + RI + N K S S G + Y +
Sbjct: 134 EIEDLDRKFSITFMLHKRF-RIIMDMIFSCPPNEKKHSKYISLHGNHAHGKCSYIKLDDI 192
Query: 90 -WLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGV 148
W LFL + S DLVT N ++ + ++ +V R I+ + + +
Sbjct: 193 CWRLFLCAKNQKPSNTVDLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFEGLPSNWTEL 252
Query: 149 DLIAS----LCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTD-GL 203
D + L + D +E+ K M+ T I+ +AS N DT GL
Sbjct: 253 DFRHNPHCILSNFCDMTEE--AKAMKATT--FRQIMSSF-FQASTIYG----NKDTMLGL 303
Query: 204 IYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITG 263
+ EN NI Y+ + GE DER+ D +T
Sbjct: 304 LANENF---ERNLKSLNI---SYEQYVLSVGEFDERILSAYDAGEHTALNDQSLRPPVTP 357
Query: 264 AKRKFDSLASP 274
RK D A P
Sbjct: 358 LTRKQDLPAQP 368
>UNIPROTKB|B7Z913 [details] [associations]
symbol:RBL2 "cDNA FLJ53278, highly similar to
Retinoblastoma-like protein 2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
UniGene:Hs.513609 HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342
EMBL:AK304283 IPI:IPI00922321 SMR:B7Z913 STRING:B7Z913
Ensembl:ENST00000544545 UCSC:uc010vgw.2 Uniprot:B7Z913
Length = 518
Score = 277 (102.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 85/292 (29%), Positives = 141/292 (48%)
Query: 222 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 281
+ K Y+ + G LDER+F+ ED +N + + +K I
Sbjct: 118 INKAYEEYVLSVGNLDERIFLGED--AEEEIGTLSRCLNAGSGTETAERVQ--MKNI--- 170
Query: 282 LSPH--RSSA---SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 335
L H +S A S P G+ + VTPVSTA + L T++ L + PS +LE+
Sbjct: 171 LQQHFDKSKALRISTPLTGVRYIKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQ 230
Query: 336 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKL 395
L++C +D T + R + E I+ + +N I ++ R + L
Sbjct: 231 ILRTCSRDPTQAIANRLKEMFE-IYSQHFQPDE------DFSNCAKEIASKHFRFAEM-L 282
Query: 396 YYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERT 455
YY+VLE++ E + L +L+ +L + FHR +LAC E+V ++K FP + E
Sbjct: 283 YYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIF 341
Query: 456 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 507
+ + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 342 DVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKI 393
Score = 62 (26.9 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 803 SPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN 860
SP+++ S H VY+SP K + ++S K +Y + SPSK L +IN +
Sbjct: 423 SPRRIQLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNSPSKRLREINSMIR 472
Query: 861 SNR---RVRGTL 869
+ + RG L
Sbjct: 473 TGETPTKKRGIL 484
>FB|FBgn0038390 [details] [associations]
symbol:Rbf2 "Retinoblastoma-family protein 2" species:7227
"Drosophila melanogaster" [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0001078 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IPI] [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0031523 "Myb complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 EMBL:AE014297
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0031523 GO:GO:0035189
GeneTree:ENSGT00530000063235 KO:K04681 InterPro:IPR024599
Pfam:PF11934 HSSP:P06400 FlyBase:FBgn0038390 EMBL:AF197059
EMBL:AY071301 RefSeq:NP_524372.1 UniGene:Dm.2418 SMR:Q9VF04
IntAct:Q9VF04 STRING:Q9VF04 EnsemblMetazoa:FBtr0083213 GeneID:41941
KEGG:dme:Dmel_CG5083 UCSC:CG5083-RA CTD:41941 InParanoid:Q9VF04
OMA:ICLRKFY GenomeRNAi:41941 NextBio:826382 Uniprot:Q9VF04
Length = 783
Score = 157 (60.3 bits), Expect = 2.5e-21, Sum P(4) = 2.5e-21
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 378 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELV 437
+ +D + +R +A LYY+ L+ + E + L+ + +LAC EL
Sbjct: 407 DFLDAELSGKRFRQARGLYYKYLQKILGPELVQKPQLKIGQLMKQRKLTAALLACCLELA 466
Query: 438 LATH-KTVTML-FPAVLERTGITAFDLSKVIESFIRHEES-LPRELRRHLNSLEERLLES 494
L H K V L FP VL + A+D K++E +R++ L REL +HL+ +EE L+S
Sbjct: 467 LHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELVVRYDHGFLGRELIKHLDVVEEMCLDS 526
Query: 495 MVWEKGSSMYNSLTVARP 512
+++ K S ++ L P
Sbjct: 527 LIFRKSSQLWWELNQRLP 544
Score = 142 (55.0 bits), Expect = 2.5e-21, Sum P(4) = 2.5e-21
Identities = 38/129 (29%), Positives = 66/129 (51%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
TG +I K LA R+ + + L L + + + + L NRH+DQ++L
Sbjct: 561 TGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQIWHLAEHSFTLESSRLLRNRHLDQLLL 620
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 748
C + ++ +L+LTF II +YR+QP + +R V + +G++ DIITF
Sbjct: 621 CAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLG------NGQT----ADIITF 670
Query: 749 YNKIFVPAV 757
YN ++V ++
Sbjct: 671 YNSVYVQSM 679
Score = 88 (36.0 bits), Expect = 2.5e-21, Sum P(4) = 2.5e-21
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 34 RLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLF 93
+LE +EL+ S L + YK I+R F+ D +A + + FGWLLF
Sbjct: 127 QLEVEELRCRLGITSTLLRHYKHIFRSLFVHPGKGADPGAA-----NHYQALYEFGWLLF 181
Query: 94 LALR--IHAFSRFKDLVTCTNGLVSILAILIIH 124
L +R + F+ +L+ LV + +L ++
Sbjct: 182 LVIRNELPGFA-ITNLINGCQVLVCTMDLLFVN 213
Score = 43 (20.2 bits), Expect = 2.5e-21, Sum P(4) = 2.5e-21
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 222 LEKDYDNATRNKGELDERVFIN 243
L + Y N + E+DERV ++
Sbjct: 309 LNRKYTNQVADISEMDERVLLS 330
Score = 37 (18.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 480 LRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 517
+RR S E+ LE+ + + S Y+ L + ++E
Sbjct: 14 VRRFSVSCEQLELEARIQQSALSTYHRLDAVNGLSTSE 51
>ZFIN|ZDB-GENE-040428-1 [details] [associations]
symbol:rb1 "retinoblastoma 1" species:7955 "Danio
rerio" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IMP] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 ZFIN:ZDB-GENE-040428-1 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031290 GO:GO:0021554 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:CU694531 IPI:IPI00501767 Ensembl:ENSDART00000024309
ArrayExpress:F1Q9D6 Bgee:F1Q9D6 Uniprot:F1Q9D6
Length = 903
Score = 160 (61.4 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 76/286 (26%), Positives = 132/286 (46%)
Query: 306 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP--SS 363
TP+ AMT+ + LR + +PS+ L + K+C D + ++ +R + E +
Sbjct: 359 TPIRAAMTSIQQLRGDLTSGSDQPSSNLLVYYKNCTVDPSGEIKKRVEELGEVFIQRFAQ 418
Query: 364 GLGERCV-TGSLQ---GANL----MDNIW-AEQRRLEALKLYYRVLE------AMCTAEA 408
+G+ C G + GA L M+++ +E++RL +++ + ++L ++
Sbjct: 419 AVGQHCEGLGRKRFYLGAQLYYKVMESMLKSEEKRL-SVQNFSKLLNNAAFHTSLLACAL 477
Query: 409 QVLHAKNLTSLLTNERFHRCMLAC-SAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 467
+V+ A + S L N F R A S E L FP +L + AFD KVIE
Sbjct: 478 EVVIATYVGSSLKNGGFGRSSGASDSVESDLC--------FPWILSVFQLPAFDFYKVIE 529
Query: 468 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADP 527
SFI+ E +L ++ +HL E ++ES+ W S +++ L +R E A+P
Sbjct: 530 SFIKAEPTLKHDMVKHLEQCEHVIMESLAWRADSPLFDLLKQSREEGPGE------QAEP 583
Query: 528 MPSLDAIATHINFSSGGL--SPVHSLHKH---ETSPGQNGDIRSPK 568
+L+ H N ++ L SPV + E P G R+P+
Sbjct: 584 PATLNQ-PLHHNHTAADLYLSPVRPCRQPPVMEAEPPTPGT-RAPR 627
Score = 157 (60.3 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 45/203 (22%), Positives = 89/203 (43%)
Query: 619 PGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSL 677
P G +++F+ K+ ++A +R+ + L S ++ ++ L Q L L
Sbjct: 619 PTPGTRAPRSNSLSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPIIWTLLQHTLQNEYEL 678
Query: 678 FFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGR 737
+RH+DQ+I+ Y + K+ ++L F+ I+ Y++ P + F+ V +
Sbjct: 679 MRDRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETFKRVLI---------- 728
Query: 738 SEQDHVDIITFYNKIFVPAVKPLLVELG-PAGTAMKTNRVSEVNHNNDGPC--PGSPKVS 794
E + II FYN +F+ +K +++ P + + + P PGS V
Sbjct: 729 REGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPHIPCSPYKNSPLRVPGSNNVY 788
Query: 795 VFPALPD-MSPKKVSATHNVYVS 816
V P +SP ++ + +S
Sbjct: 789 VSPLKSSRVSPLVMTPRSRILIS 811
Score = 89 (36.4 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 771 MKTNRVSEVNHNNDGPCPGSPKVSVFPALP-DMSPKKVSATHNVYVSPLRTSKMDALISH 829
+KTN + +++ P P SP + P P SP +V ++NVYVSPL++S++ L+
Sbjct: 748 LKTNILQ---YSSPRPPPLSP-IPHIPCSPYKNSPLRVPGSNNVYVSPLKSSRVSPLVMT 803
Query: 830 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSN 862
+GES + S K IN ++S+
Sbjct: 804 PRSRILISIGES---FGSADK-FQKINQMVSSS 832
Score = 67 (28.6 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 24/120 (20%), Positives = 49/120 (40%)
Query: 185 CEASECKSENLENI-DTDGLIYFENL-MXXXXXXXXXNILEKDYDNATRNKGELDERVFI 242
C+ +C + ++N+ + + +++ + L K Y+ + D R+F+
Sbjct: 264 CKEGDCSVDEVKNVYQSTFCAFLDSVGLLGLQGLPPMEALSKQYEELYHKSKDFDARLFL 323
Query: 243 NEDDXXXXXXXXXXXAVNITGAKRKF-DSLASPVKTITSPLSPHRSSASHPNGIAGGATS 301
+ DD V +T K F + +A PV P +P R++ + + G TS
Sbjct: 324 S-DDETLSPNKIEVSKVEVTPRKNLFAEDIAIPV-----PQTPIRAAMTSIQQLRGDLTS 377
Score = 41 (19.5 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 148 VDLIASLCSIYDTSEDDLRKIMEKT 172
+ L+ +LC D S D+++ + + T
Sbjct: 257 MQLLETLCKEGDCSVDEVKNVYQST 281
>UNIPROTKB|I3LUP8 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 Pfam:PF01857 GO:GO:0005737
GO:GO:0005730 GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 GO:GO:0043550
Ensembl:ENSSSCT00000026766 OMA:AENDSPS Uniprot:I3LUP8
Length = 411
Score = 203 (76.5 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 41/125 (32%), Positives = 77/125 (61%)
Query: 629 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 688
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 105 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 164
Query: 689 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 746
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 165 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 224
Query: 747 TFYNK 751
T NK
Sbjct: 225 TELNK 229
Score = 82 (33.9 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 790 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 847
+P +S +P + SP+++ S H VY+SP K +A++S K +Y + S
Sbjct: 303 APPLSPYPFIRSGSPRRIQLSQNHPVYISP---HKSEAMLSPREKIFY-------YFSNS 352
Query: 848 PSKDLTDINHRLNSNR---RVRGTL 869
PSK L +IN + + + RG L
Sbjct: 353 PSKRLREINSMIRTGETPTKKRGIL 377
Score = 64 (27.6 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 735 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 794
S E++ D+I FYN I++ +K A+K ++ + + D P P SP
Sbjct: 266 SDMEEEERGDLIQFYNSIYIKQIKTF---------ALKYSQANVM----DAP-PLSPYPF 311
Query: 795 VFPALPDMSPKKVSATHNVYVSPLRTSKM 823
+ P ++S H VY+SP ++ M
Sbjct: 312 IRSGSPRRI--QLSQNHPVYISPHKSEAM 338
>WB|WBGene00003020 [details] [associations]
symbol:lin-35 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IGI;IMP] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IGI] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IGI] [GO:0071850 "mitotic cell cycle arrest" evidence=IGI]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
GO:GO:0040027 GO:GO:0071850 GO:GO:0048557 EMBL:FO080198
GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 163 (62.4 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 631 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 690
+ IF + AA R+ + +R+ + + + + LF +L T +F +RH+DQI+LCC
Sbjct: 745 LRIFLKRTYFTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCC 804
Query: 691 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 727
+ + KI++ ++ F EI+ YR+Q V+RSV V
Sbjct: 805 VFVIMKINESSMLFTEIMAQYRRQSANSLLVYRSVTV 841
Score = 124 (48.7 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 367 ERCVTGSLQGANLMDNI----WAEQRRLEALKLYYRVLEAMCTAEAQV-LHAKNLTSLLT 421
ER ++ L G + +NI + ++ LE + L + +E + AE + + ++L +++
Sbjct: 550 ERTLSAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIR 606
Query: 422 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 481
E F + EL+L ++ FP E G+ F KVI+ I HE+ L R++
Sbjct: 607 REEFLDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMV 665
Query: 482 RHLNSLEERLLESMVWEKGSSMY 504
+H + +EE ++E W+ S ++
Sbjct: 666 QHFSRIEETVIEYFSWKSDSPLW 688
Score = 53 (23.7 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 220 NILEKDYDNATRNKGELDERVFI 242
N+ + Y+N +G +DER+FI
Sbjct: 390 NVPKTAYENYLLQRGSIDERIFI 412
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 702 LTFREI-IYNYRKQPQCKPQVFRSVFVDWASARQSG-RSEQDHVDIITFYNKIFVPAVKP 759
L +R + ++ + P+ PQ + + R G + E+ VDII +YN F +K
Sbjct: 834 LVYRSVTVFQEQLNPE-NPQAVNTK--ETILERLEGPQKEKTTVDIIKYYNIEFRDRIKY 890
Query: 760 LLVELGPA 767
++ ++ A
Sbjct: 891 IIGQIDSA 898
Score = 42 (19.8 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 159 DTSEDDLRKIMEKTNT 174
D EDD ++KTNT
Sbjct: 111 DYEEDDADSFIDKTNT 126
>UNIPROTKB|G5EDT1 [details] [associations]
symbol:lin-35 "Synthetic multivulva protein LIN-35 Rb"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GO:GO:0040027 GO:GO:0071850 GO:GO:0048557
EMBL:FO080198 GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 163 (62.4 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 631 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 690
+ IF + AA R+ + +R+ + + + + LF +L T +F +RH+DQI+LCC
Sbjct: 745 LRIFLKRTYFTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCC 804
Query: 691 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 727
+ + KI++ ++ F EI+ YR+Q V+RSV V
Sbjct: 805 VFVIMKINESSMLFTEIMAQYRRQSANSLLVYRSVTV 841
Score = 124 (48.7 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 367 ERCVTGSLQGANLMDNI----WAEQRRLEALKLYYRVLEAMCTAEAQV-LHAKNLTSLLT 421
ER ++ L G + +NI + ++ LE + L + +E + AE + + ++L +++
Sbjct: 550 ERTLSAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIR 606
Query: 422 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 481
E F + EL+L ++ FP E G+ F KVI+ I HE+ L R++
Sbjct: 607 REEFLDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMV 665
Query: 482 RHLNSLEERLLESMVWEKGSSMY 504
+H + +EE ++E W+ S ++
Sbjct: 666 QHFSRIEETVIEYFSWKSDSPLW 688
Score = 53 (23.7 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 220 NILEKDYDNATRNKGELDERVFI 242
N+ + Y+N +G +DER+FI
Sbjct: 390 NVPKTAYENYLLQRGSIDERIFI 412
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 702 LTFREI-IYNYRKQPQCKPQVFRSVFVDWASARQSG-RSEQDHVDIITFYNKIFVPAVKP 759
L +R + ++ + P+ PQ + + R G + E+ VDII +YN F +K
Sbjct: 834 LVYRSVTVFQEQLNPE-NPQAVNTK--ETILERLEGPQKEKTTVDIIKYYNIEFRDRIKY 890
Query: 760 LLVELGPA 767
++ ++ A
Sbjct: 891 IIGQIDSA 898
Score = 42 (19.8 bits), Expect = 4.5e-16, Sum P(4) = 4.5e-16
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 159 DTSEDDLRKIMEKTNT 174
D EDD ++KTNT
Sbjct: 111 DYEEDDADSFIDKTNT 126
>UNIPROTKB|H9KZ60 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005059
Uniprot:H9KZ60
Length = 425
Score = 186 (70.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 68/251 (27%), Positives = 112/251 (44%)
Query: 222 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 281
+ K Y+ + G LDER+F+ ED +N A V+ +
Sbjct: 189 INKAYEEYVLSVGNLDERIFLGED--ADEEIGTLTRCLNTPSGMET----AERVQ-VKHN 241
Query: 282 LSPHRSSASHPN---GIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 335
L H + P + G S VTPVS A + L T++ L + PS LE+
Sbjct: 242 LQQHFDRSKSPRVTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 301
Query: 336 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALK 394
++C +D + + R + E ++ S E + +NL ++ ++ RR E L
Sbjct: 302 IFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRRAEVL- 353
Query: 395 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 454
YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP + E
Sbjct: 354 -YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEI 411
Query: 455 TGITAFDLSKV 465
I + KV
Sbjct: 412 FDIPVYHFYKV 422
Score = 64 (27.6 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 22/97 (22%), Positives = 47/97 (48%)
Query: 4 NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL 63
++++FF ++ K ++N+ + + R E L+ NF +++ K Y+ I+++ F
Sbjct: 22 SLIEFFNKM-----KKWEDMANL-PSQFRERTE--RLERNFTVSAVIFKKYEPIFQDIFR 73
Query: 64 ------PSDANGDKQSAAASTSGYISDYHRFGWLLFL 94
P G KQ T +++ +F W+LF+
Sbjct: 74 YPQEDQPRQQRGRKQRRQPCT---VTEVFQFCWVLFV 107
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 912 861 0.00083 122 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 622 (66 KB)
Total size of DFA: 410 KB (2199 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.30u 0.11s 74.41t Elapsed: 00:00:03
Total cpu time: 74.33u 0.11s 74.44t Elapsed: 00:00:03
Start: Tue May 21 11:35:27 2013 End: Tue May 21 11:35:30 2013