Query 002531
Match_columns 912
No_of_seqs 292 out of 516
Neff 3.5
Searched_HMMs 46136
Date Fri Mar 29 01:52:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002531.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002531hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2116 Protein involved in pl 100.0 7E-153 2E-157 1276.9 41.0 721 1-911 1-738 (738)
2 COG5083 SMP2 Uncharacterized p 100.0 9E-92 1.9E-96 760.3 27.5 243 658-906 327-575 (580)
3 PF08235 LNS2: LNS2 (Lipin/Ned 100.0 4.1E-55 8.9E-60 428.1 15.3 157 711-867 1-157 (157)
4 smart00775 LNS2 LNS2 domain. T 100.0 2.5E-40 5.3E-45 320.7 16.5 156 711-866 1-156 (157)
5 PF04571 Lipin_N: lipin, N-ter 100.0 1.9E-39 4.1E-44 301.3 7.7 103 1-106 1-107 (110)
6 COG4850 Uncharacterized conser 99.0 9.8E-10 2.1E-14 119.3 11.5 170 674-859 128-309 (373)
7 TIGR01675 plant-AP plant acid 99.0 4.4E-09 9.6E-14 109.9 11.6 129 707-857 75-220 (229)
8 PHA02530 pseT polynucleotide k 98.9 1.1E-08 2.4E-13 106.7 12.8 134 708-855 157-295 (300)
9 cd01427 HAD_like Haloacid deha 98.9 1.1E-08 2.4E-13 90.0 10.1 129 711-852 1-136 (139)
10 TIGR01680 Veg_Stor_Prot vegeta 98.9 8.8E-09 1.9E-13 110.2 10.9 128 708-857 100-247 (275)
11 TIGR01689 EcbF-BcbF capsule bi 98.8 1.8E-08 4E-13 96.8 7.8 105 710-824 2-119 (126)
12 PF03767 Acid_phosphat_B: HAD 98.6 7.9E-09 1.7E-13 107.1 1.6 134 707-857 70-220 (229)
13 PRK11009 aphA acid phosphatase 98.5 3.4E-07 7.3E-12 96.1 10.5 124 709-857 63-212 (237)
14 PF09949 DUF2183: Uncharacteri 98.5 4E-07 8.7E-12 84.8 9.4 91 755-858 1-95 (100)
15 TIGR01533 lipo_e_P4 5'-nucleot 98.4 7.6E-07 1.7E-11 95.0 8.4 115 708-847 74-206 (266)
16 TIGR01662 HAD-SF-IIIA HAD-supe 98.3 1.9E-06 4.1E-11 79.9 8.1 117 710-852 1-127 (132)
17 TIGR01672 AphA HAD superfamily 98.1 1.4E-05 3.1E-10 84.0 11.2 125 709-856 63-211 (237)
18 TIGR01656 Histidinol-ppas hist 98.1 2.1E-05 4.4E-10 75.4 9.8 128 710-852 1-141 (147)
19 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.0 3.1E-05 6.7E-10 75.3 10.0 109 739-865 82-195 (201)
20 TIGR00213 GmhB_yaeD D,D-heptos 98.0 4.6E-05 1E-09 74.9 10.5 130 710-852 2-146 (176)
21 TIGR01664 DNA-3'-Pase DNA 3'-p 97.9 8.2E-05 1.8E-09 73.7 11.3 126 708-852 12-158 (166)
22 TIGR00338 serB phosphoserine p 97.8 5.2E-05 1.1E-09 75.6 7.1 103 739-861 87-196 (219)
23 TIGR01261 hisB_Nterm histidino 97.8 0.00018 3.9E-09 71.2 10.5 131 709-853 1-144 (161)
24 PLN02954 phosphoserine phospha 97.7 0.00011 2.3E-09 73.6 7.4 134 704-851 8-191 (224)
25 PRK08942 D,D-heptose 1,7-bisph 97.6 0.00059 1.3E-08 67.2 12.0 128 708-851 2-142 (181)
26 TIGR01670 YrbI-phosphatas 3-de 97.6 0.00016 3.5E-09 70.3 7.9 111 710-851 2-114 (154)
27 TIGR01545 YfhB_g-proteo haloac 97.6 0.00013 2.7E-09 74.9 7.2 107 739-866 96-208 (210)
28 PRK09484 3-deoxy-D-manno-octul 97.6 0.00022 4.8E-09 71.2 8.0 113 708-851 20-134 (183)
29 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.6 0.00038 8.2E-09 68.5 9.4 113 739-864 89-202 (202)
30 TIGR03333 salvage_mtnX 2-hydro 97.4 0.00019 4E-09 72.6 5.1 97 739-859 72-182 (214)
31 PRK10976 putative hydrolase; P 97.4 0.0011 2.3E-08 68.5 10.3 53 710-776 3-55 (266)
32 PRK09552 mtnX 2-hydroxy-3-keto 97.4 0.001 2.3E-08 67.4 9.8 92 739-850 76-181 (219)
33 PRK15126 thiamin pyrimidine py 97.2 0.0015 3.3E-08 67.8 9.9 55 709-777 2-56 (272)
34 TIGR01428 HAD_type_II 2-haloal 97.2 0.0013 2.9E-08 64.8 8.9 100 739-863 94-196 (198)
35 PF08645 PNK3P: Polynucleotide 97.2 0.0014 3.1E-08 64.9 9.1 126 710-851 1-151 (159)
36 PF13344 Hydrolase_6: Haloacid 97.2 0.0028 6.1E-08 58.4 10.0 100 712-850 1-100 (101)
37 PF08282 Hydrolase_3: haloacid 97.2 0.0009 1.9E-08 65.7 7.1 50 712-772 1-50 (254)
38 PRK10513 sugar phosphate phosp 97.2 0.0012 2.7E-08 68.0 8.5 68 709-793 3-70 (270)
39 PRK13478 phosphonoacetaldehyde 97.2 0.0021 4.6E-08 67.0 10.2 94 739-852 103-199 (267)
40 TIGR01487 SPP-like sucrose-pho 97.2 0.00081 1.8E-08 67.6 6.9 47 710-767 2-48 (215)
41 TIGR01422 phosphonatase phosph 97.2 0.002 4.4E-08 66.3 9.9 95 739-852 101-197 (253)
42 PRK01158 phosphoglycolate phos 97.2 0.00093 2E-08 67.1 7.2 48 710-768 4-51 (230)
43 TIGR01663 PNK-3'Pase polynucle 97.2 0.001 2.2E-08 77.5 8.4 124 707-850 166-305 (526)
44 PRK05446 imidazole glycerol-ph 97.1 0.0047 1E-07 69.0 12.9 137 709-862 2-151 (354)
45 PRK13226 phosphoglycolate phos 97.1 0.0017 3.6E-08 66.4 8.7 95 739-853 97-192 (229)
46 TIGR01681 HAD-SF-IIIC HAD-supe 97.1 0.004 8.6E-08 59.1 10.5 58 710-767 1-60 (128)
47 PLN02645 phosphoglycolate phos 97.1 0.0022 4.8E-08 69.2 9.8 107 709-852 28-134 (311)
48 TIGR01549 HAD-SF-IA-v1 haloaci 97.1 0.0029 6.3E-08 59.8 9.4 89 739-849 66-154 (154)
49 PRK14988 GMP/IMP nucleotidase; 97.1 0.0018 3.8E-08 66.5 8.5 103 739-864 95-200 (224)
50 PRK13582 thrH phosphoserine ph 97.1 0.0021 4.6E-08 63.4 8.6 95 739-852 70-167 (205)
51 PRK11133 serB phosphoserine ph 97.1 0.00096 2.1E-08 73.1 6.4 125 739-880 183-310 (322)
52 TIGR01668 YqeG_hyp_ppase HAD s 97.0 0.0042 9.1E-08 61.5 10.2 115 707-861 23-138 (170)
53 TIGR01488 HAD-SF-IB Haloacid D 97.0 0.0027 6E-08 60.8 8.6 99 739-848 75-177 (177)
54 PLN03243 haloacid dehalogenase 97.0 0.0017 3.7E-08 68.7 7.9 94 739-852 111-205 (260)
55 PRK08238 hypothetical protein; 97.0 0.0018 3.9E-08 74.6 8.0 129 708-865 9-171 (479)
56 TIGR01489 DKMTPPase-SF 2,3-dik 97.0 0.0028 6.2E-08 61.0 8.1 100 740-851 75-184 (188)
57 TIGR03351 PhnX-like phosphonat 96.9 0.0041 8.9E-08 62.2 9.2 96 740-852 90-186 (220)
58 PLN02940 riboflavin kinase 96.9 0.0021 4.6E-08 71.6 7.9 94 739-852 95-190 (382)
59 TIGR02252 DREG-2 REG-2-like, H 96.9 0.0035 7.6E-08 61.9 8.5 91 739-852 107-201 (203)
60 TIGR01482 SPP-subfamily Sucros 96.9 0.0016 3.5E-08 65.0 6.2 47 712-769 1-47 (225)
61 COG0561 Cof Predicted hydrolas 96.9 0.002 4.4E-08 66.5 6.9 53 709-772 3-55 (264)
62 PRK10826 2-deoxyglucose-6-phos 96.9 0.0021 4.5E-08 64.8 6.7 94 740-852 95-188 (222)
63 PRK06769 hypothetical protein; 96.9 0.0058 1.3E-07 60.7 9.6 125 709-853 4-134 (173)
64 PRK12702 mannosyl-3-phosphogly 96.9 0.002 4.3E-08 70.7 6.7 52 710-772 2-53 (302)
65 PRK10444 UMP phosphatase; Prov 96.9 0.0019 4.1E-08 68.0 6.4 66 710-790 2-67 (248)
66 PF06941 NT5C: 5' nucleotidase 96.9 0.0009 1.9E-08 66.9 3.8 39 739-777 75-117 (191)
67 PF15017 AF1Q: Drug resistance 96.8 0.00057 1.2E-08 63.1 2.0 30 883-912 5-35 (87)
68 PRK03669 mannosyl-3-phosphogly 96.8 0.0029 6.2E-08 66.3 7.5 69 708-795 6-74 (271)
69 TIGR02726 phenyl_P_delta pheny 96.8 0.0023 5.1E-08 64.3 6.4 112 709-851 7-120 (169)
70 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.8 0.002 4.4E-08 67.7 5.8 58 710-776 2-60 (257)
71 PRK10530 pyridoxal phosphate ( 96.7 0.0031 6.7E-08 64.8 6.8 69 709-797 3-71 (272)
72 COG0241 HisB Histidinol phosph 96.7 0.018 3.9E-07 59.4 12.2 132 708-856 4-149 (181)
73 PTZ00174 phosphomannomutase; P 96.7 0.0035 7.5E-08 65.2 7.1 53 709-775 5-57 (247)
74 PLN02779 haloacid dehalogenase 96.7 0.0052 1.1E-07 65.7 8.2 95 739-852 146-242 (286)
75 TIGR02463 MPGP_rel mannosyl-3- 96.7 0.0035 7.7E-08 63.0 6.5 68 711-797 1-68 (221)
76 PF12710 HAD: haloacid dehalog 96.6 0.0009 2E-08 64.6 1.8 91 744-846 96-192 (192)
77 PRK00192 mannosyl-3-phosphogly 96.6 0.0042 9.1E-08 65.2 6.9 50 708-768 3-52 (273)
78 TIGR00099 Cof-subfamily Cof su 96.5 0.005 1.1E-07 63.4 6.4 52 711-776 1-52 (256)
79 PRK13223 phosphoglycolate phos 96.5 0.0072 1.6E-07 64.0 7.7 94 739-853 103-198 (272)
80 TIGR01685 MDP-1 magnesium-depe 96.5 0.02 4.3E-07 58.2 10.3 132 709-852 2-153 (174)
81 TIGR02461 osmo_MPG_phos mannos 96.4 0.0061 1.3E-07 63.1 6.5 52 711-777 1-52 (225)
82 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.4 0.0063 1.4E-07 63.7 6.6 56 710-777 2-57 (249)
83 TIGR01452 PGP_euk phosphoglyco 96.3 0.0076 1.6E-07 63.8 6.5 55 710-776 3-57 (279)
84 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.3 0.023 5.1E-07 58.8 9.9 56 708-776 7-62 (242)
85 TIGR02137 HSK-PSP phosphoserin 96.3 0.023 5.1E-07 58.3 9.5 120 739-882 70-195 (203)
86 PRK13225 phosphoglycolate phos 96.2 0.0088 1.9E-07 64.0 6.5 92 739-852 144-235 (273)
87 smart00577 CPDc catalytic doma 96.2 0.0074 1.6E-07 58.4 5.4 124 709-854 2-140 (148)
88 COG0546 Gph Predicted phosphat 96.2 0.021 4.6E-07 58.4 9.0 92 739-852 91-185 (220)
89 TIGR01486 HAD-SF-IIB-MPGP mann 96.2 0.0089 1.9E-07 62.0 6.2 52 711-776 1-52 (256)
90 TIGR01484 HAD-SF-IIB HAD-super 96.1 0.012 2.6E-07 58.4 6.5 48 711-768 1-48 (204)
91 PHA02597 30.2 hypothetical pro 96.0 0.022 4.8E-07 56.4 7.7 93 739-853 76-171 (197)
92 PLN02887 hydrolase family prot 96.0 0.011 2.5E-07 69.7 6.7 63 700-776 299-361 (580)
93 TIGR01686 FkbH FkbH-like domai 95.9 0.095 2.1E-06 56.9 12.7 121 708-849 2-123 (320)
94 PLN02575 haloacid dehalogenase 95.9 0.019 4.2E-07 64.9 7.7 95 740-853 219-313 (381)
95 PRK10748 flavin mononucleotide 95.7 0.027 5.8E-07 58.2 7.1 28 831-862 183-211 (238)
96 PRK06698 bifunctional 5'-methy 95.6 0.041 8.9E-07 62.4 8.7 92 739-852 332-423 (459)
97 PRK10187 trehalose-6-phosphate 95.5 0.035 7.7E-07 59.0 7.3 54 709-768 14-68 (266)
98 COG0560 SerB Phosphoserine pho 95.3 0.083 1.8E-06 54.9 8.9 114 739-866 79-193 (212)
99 COG0647 NagD Predicted sugar p 95.2 0.089 1.9E-06 57.2 9.4 56 709-776 8-63 (269)
100 PRK14502 bifunctional mannosyl 95.2 0.036 7.8E-07 66.8 7.0 52 709-771 416-467 (694)
101 COG2503 Predicted secreted aci 95.1 0.058 1.3E-06 58.4 7.4 70 708-777 78-163 (274)
102 TIGR01485 SPP_plant-cyano sucr 95.1 0.034 7.5E-07 57.5 5.6 52 710-769 2-53 (249)
103 PRK10725 fructose-1-P/6-phosph 95.0 0.051 1.1E-06 52.9 6.1 18 835-852 165-182 (188)
104 PLN02919 haloacid dehalogenase 94.9 0.049 1.1E-06 68.4 7.1 92 739-851 163-257 (1057)
105 TIGR01460 HAD-SF-IIA Haloacid 94.5 0.055 1.2E-06 56.3 5.4 53 712-776 1-53 (236)
106 COG5663 Uncharacterized conser 94.5 0.1 2.2E-06 54.1 7.1 80 753-864 87-167 (194)
107 PLN02423 phosphomannomutase 94.5 0.083 1.8E-06 55.5 6.6 44 709-764 6-50 (245)
108 PF11019 DUF2608: Protein of u 94.3 0.26 5.7E-06 52.7 10.0 77 708-787 19-128 (252)
109 TIGR01684 viral_ppase viral ph 94.2 0.11 2.4E-06 57.4 7.1 63 702-776 120-182 (301)
110 PF13419 HAD_2: Haloacid dehal 94.1 0.13 2.9E-06 47.8 6.5 93 739-852 79-173 (176)
111 TIGR01456 CECR5 HAD-superfamil 94.0 0.061 1.3E-06 58.6 4.7 52 711-774 2-57 (321)
112 TIGR01449 PGP_bact 2-phosphogl 94.0 0.2 4.4E-06 49.6 7.9 94 739-853 87-182 (213)
113 COG0637 Predicted phosphatase/ 93.8 0.16 3.4E-06 52.6 7.0 94 739-852 88-182 (221)
114 PF12689 Acid_PPase: Acid Phos 93.8 0.29 6.3E-06 50.0 8.7 128 709-853 3-148 (169)
115 PHA03398 viral phosphatase sup 93.0 0.24 5.2E-06 54.9 7.0 64 702-777 122-185 (303)
116 TIGR02471 sucr_syn_bact_C sucr 92.9 0.11 2.4E-06 53.3 4.1 45 711-768 1-45 (236)
117 TIGR01454 AHBA_synth_RP 3-amin 92.8 0.42 9.1E-06 47.7 8.0 95 739-853 77-172 (205)
118 PF05116 S6PP: Sucrose-6F-phos 92.7 0.14 3E-06 54.0 4.7 48 709-770 2-52 (247)
119 PRK13288 pyrophosphatase PpaX; 92.6 0.22 4.8E-06 50.0 5.8 93 740-852 85-178 (214)
120 PF03031 NIF: NLI interacting 92.4 0.16 3.4E-06 49.1 4.2 64 710-775 1-73 (159)
121 TIGR02251 HIF-SF_euk Dullard-l 92.3 0.13 2.8E-06 51.1 3.6 64 710-775 2-79 (162)
122 PRK13222 phosphoglycolate phos 92.1 0.74 1.6E-05 46.0 8.7 94 739-852 95-189 (226)
123 PRK14501 putative bifunctional 91.9 0.35 7.6E-06 58.3 7.3 59 708-775 491-550 (726)
124 PLN03017 trehalose-phosphatase 91.6 0.39 8.4E-06 54.5 6.8 58 706-770 108-165 (366)
125 PRK11590 hypothetical protein; 91.6 0.53 1.2E-05 48.0 7.1 111 739-865 97-208 (211)
126 PLN02382 probable sucrose-phos 91.5 0.3 6.4E-06 55.7 5.7 54 709-770 9-62 (413)
127 TIGR00685 T6PP trehalose-phosp 91.4 0.4 8.6E-06 50.0 6.1 50 709-764 3-53 (244)
128 PF09419 PGP_phosphatase: Mito 90.6 1.9 4E-05 44.3 9.9 51 703-763 35-87 (168)
129 TIGR01990 bPGM beta-phosphoglu 90.3 0.65 1.4E-05 45.0 6.1 90 739-852 89-181 (185)
130 TIGR02250 FCP1_euk FCP1-like p 90.3 0.64 1.4E-05 46.4 6.2 68 707-775 4-95 (156)
131 PRK09456 ?-D-glucose-1-phospha 90.2 0.92 2E-05 45.4 7.2 94 739-852 86-181 (199)
132 TIGR01509 HAD-SF-IA-v3 haloaci 89.0 1.5 3.3E-05 42.0 7.5 91 739-852 87-180 (183)
133 PLN02151 trehalose-phosphatase 88.6 0.99 2.1E-05 51.1 6.8 56 705-767 94-149 (354)
134 TIGR02009 PGMB-YQAB-SF beta-ph 88.5 1.5 3.3E-05 42.5 7.2 92 738-852 89-182 (185)
135 COG1778 Low specificity phosph 88.0 1 2.2E-05 46.5 5.8 112 708-852 7-122 (170)
136 COG3700 AphA Acid phosphatase 87.8 1.8 4E-05 45.7 7.6 126 709-857 63-212 (237)
137 PLN02770 haloacid dehalogenase 86.8 2.2 4.7E-05 44.7 7.6 92 739-852 110-204 (248)
138 TIGR02253 CTE7 HAD superfamily 86.6 2.3 5.1E-05 42.5 7.4 92 739-852 96-191 (221)
139 PRK11587 putative phosphatase; 86.4 1.8 3.8E-05 44.0 6.5 92 739-852 85-178 (218)
140 COG1877 OtsB Trehalose-6-phosp 85.9 1.5 3.3E-05 47.9 6.1 55 705-765 14-69 (266)
141 TIGR01544 HAD-SF-IE haloacid d 85.0 8.1 0.00018 42.7 11.1 130 738-882 122-260 (277)
142 KOG1615 Phosphoserine phosphat 84.7 1.4 3.1E-05 46.9 5.0 119 739-876 90-215 (227)
143 PLN02580 trehalose-phosphatase 84.4 2.3 5E-05 48.7 6.8 53 708-767 118-170 (384)
144 PF00702 Hydrolase: haloacid d 84.0 1.8 4E-05 42.3 5.2 90 734-849 124-215 (215)
145 TIGR01691 enolase-ppase 2,3-di 83.8 3 6.4E-05 44.0 6.9 95 738-852 96-192 (220)
146 PF02358 Trehalose_PPase: Treh 83.7 1.5 3.3E-05 45.3 4.8 48 713-766 1-49 (235)
147 PLN02205 alpha,alpha-trehalose 83.4 2.3 4.9E-05 53.1 6.8 57 708-775 595-652 (854)
148 TIGR01511 ATPase-IB1_Cu copper 83.4 6.4 0.00014 46.6 10.2 104 709-851 385-488 (562)
149 TIGR01525 ATPase-IB_hvy heavy 83.1 5.9 0.00013 46.6 9.7 103 710-850 365-468 (556)
150 COG3769 Predicted hydrolase (H 82.6 3.9 8.4E-05 44.5 7.2 47 707-765 5-51 (274)
151 TIGR02253 CTE7 HAD superfamily 81.1 2 4.3E-05 43.0 4.3 16 709-724 2-17 (221)
152 PTZ00445 p36-lilke protein; Pr 80.5 15 0.00033 39.6 10.7 147 704-854 38-203 (219)
153 PRK11590 hypothetical protein; 80.0 0.91 2E-05 46.3 1.5 19 708-726 5-23 (211)
154 COG4359 Uncharacterized conser 79.2 1.7 3.8E-05 46.0 3.3 36 739-777 75-110 (220)
155 cd03016 PRX_1cys Peroxiredoxin 79.0 7.3 0.00016 40.1 7.6 65 711-778 8-81 (203)
156 TIGR02254 YjjG/YfnB HAD superf 78.7 9.9 0.00021 37.9 8.3 93 739-852 99-194 (224)
157 TIGR02247 HAD-1A3-hyp Epoxide 78.5 5.8 0.00013 39.8 6.6 27 738-764 95-121 (211)
158 KOG2914 Predicted haloacid-hal 76.9 22 0.00048 38.2 10.7 99 739-852 94-192 (222)
159 PF10307 DUF2410: Hypothetical 76.3 23 0.0005 37.6 10.5 100 734-848 51-152 (197)
160 PLN02811 hydrolase 75.5 12 0.00026 38.2 8.1 97 738-852 79-180 (220)
161 TIGR02009 PGMB-YQAB-SF beta-ph 75.5 1.5 3.2E-05 42.5 1.5 15 710-724 2-16 (185)
162 PRK13288 pyrophosphatase PpaX; 75.5 1.5 3.3E-05 44.0 1.6 16 709-724 3-18 (214)
163 PRK11587 putative phosphatase; 75.4 1.5 3.3E-05 44.5 1.6 15 710-724 4-18 (218)
164 PRK10671 copA copper exporting 74.8 13 0.00028 46.1 9.4 86 735-850 648-733 (834)
165 TIGR01548 HAD-SF-IA-hyp1 haloa 73.8 1.4 3.1E-05 43.9 0.9 15 710-724 1-15 (197)
166 PRK13222 phosphoglycolate phos 73.1 1.8 3.8E-05 43.3 1.4 16 709-724 6-21 (226)
167 TIGR01116 ATPase-IIA1_Ca sarco 72.1 17 0.00037 45.8 9.7 105 734-850 534-651 (917)
168 TIGR01512 ATPase-IB2_Cd heavy 72.0 13 0.00029 43.7 8.3 87 734-850 359-446 (536)
169 PRK13190 putative peroxiredoxi 71.9 11 0.00024 39.0 6.8 61 715-778 15-83 (202)
170 TIGR01990 bPGM beta-phosphoglu 71.8 1.7 3.8E-05 42.0 1.0 14 711-724 1-14 (185)
171 COG4229 Predicted enolase-phos 71.2 8.9 0.00019 40.9 5.9 135 709-888 4-155 (229)
172 PRK09449 dUMP phosphatase; Pro 70.4 24 0.00051 35.7 8.7 92 739-852 97-192 (224)
173 PLN02770 haloacid dehalogenase 70.4 2.3 5E-05 44.5 1.6 16 709-724 22-37 (248)
174 KOG2630 Enolase-phosphatase E- 70.2 6.9 0.00015 42.7 5.0 51 835-888 125-175 (254)
175 TIGR01106 ATPase-IIC_X-K sodiu 68.5 19 0.00041 45.8 9.1 107 734-852 565-708 (997)
176 TIGR01993 Pyr-5-nucltdase pyri 67.5 3.1 6.8E-05 40.9 1.7 18 835-852 164-181 (184)
177 TIGR02254 YjjG/YfnB HAD superf 67.0 2.9 6.3E-05 41.7 1.4 16 710-725 2-17 (224)
178 TIGR02245 HAD_IIID1 HAD-superf 66.1 15 0.00032 38.6 6.4 64 706-774 18-81 (195)
179 PLN03064 alpha,alpha-trehalose 64.4 15 0.00033 46.7 7.1 63 708-775 590-658 (934)
180 PLN03063 alpha,alpha-trehalose 64.1 16 0.00034 45.6 7.1 62 708-775 506-568 (797)
181 TIGR01452 PGP_euk phosphoglyco 63.8 33 0.00071 36.8 8.6 40 706-763 129-168 (279)
182 TIGR01497 kdpB K+-transporting 63.1 29 0.00062 42.8 8.9 88 734-851 443-530 (675)
183 PRK10563 6-phosphogluconate ph 63.0 4.1 8.8E-05 41.2 1.6 18 835-852 165-182 (221)
184 TIGR01493 HAD-SF-IA-v2 Haloaci 62.9 3.4 7.3E-05 40.0 1.0 14 711-724 1-14 (175)
185 TIGR01548 HAD-SF-IA-hyp1 haloa 62.7 29 0.00063 34.7 7.5 32 739-770 108-139 (197)
186 PRK09449 dUMP phosphatase; Pro 62.1 4 8.7E-05 41.2 1.4 15 710-724 4-18 (224)
187 TIGR01449 PGP_bact 2-phosphogl 61.6 3.3 7.2E-05 41.1 0.7 13 712-724 1-13 (213)
188 PF00702 Hydrolase: haloacid d 61.0 4.9 0.00011 39.3 1.8 40 814-857 133-173 (215)
189 TIGR02247 HAD-1A3-hyp Epoxide 60.1 4.8 0.0001 40.4 1.5 15 710-724 3-17 (211)
190 TIGR01522 ATPase-IIA2_Ca golgi 58.6 47 0.001 41.7 9.9 103 735-850 526-638 (884)
191 TIGR01454 AHBA_synth_RP 3-amin 58.1 4.1 9E-05 40.7 0.7 13 712-724 1-13 (205)
192 cd03015 PRX_Typ2cys Peroxiredo 56.7 64 0.0014 32.0 8.7 65 710-777 7-84 (173)
193 PF10340 DUF2424: Protein of u 56.5 54 0.0012 38.0 9.1 148 712-867 156-317 (374)
194 cd02964 TryX_like_family Trypa 56.3 52 0.0011 31.0 7.7 35 740-776 37-73 (132)
195 TIGR01993 Pyr-5-nucltdase pyri 52.1 45 0.00097 32.9 6.8 14 711-724 2-15 (184)
196 TIGR01509 HAD-SF-IA-v3 haloaci 51.9 5.5 0.00012 38.2 0.4 16 711-726 1-16 (183)
197 TIGR01524 ATPase-IIIB_Mg magne 51.6 51 0.0011 41.5 8.6 105 735-852 513-627 (867)
198 cd03017 PRX_BCP Peroxiredoxin 50.7 1.1E+02 0.0024 28.5 8.8 35 740-777 44-78 (140)
199 PF06888 Put_Phosphatase: Puta 50.4 13 0.00029 40.0 3.0 36 739-777 73-110 (234)
200 TIGR01517 ATPase-IIB_Ca plasma 50.3 71 0.0015 40.5 9.6 106 734-853 576-694 (941)
201 TIGR01691 enolase-ppase 2,3-di 50.0 28 0.00061 36.9 5.3 31 710-740 2-41 (220)
202 PRK13599 putative peroxiredoxi 49.8 68 0.0015 33.9 8.0 26 739-764 48-73 (215)
203 cd02968 SCO SCO (an acronym fo 49.7 78 0.0017 29.6 7.6 37 741-777 44-84 (142)
204 PRK13189 peroxiredoxin; Provis 49.0 91 0.002 33.0 8.8 63 713-778 20-91 (222)
205 COG4087 Soluble P-type ATPase 48.5 68 0.0015 33.0 7.3 107 714-864 19-125 (152)
206 cd03012 TlpA_like_DipZ_like Tl 48.4 63 0.0014 30.2 6.8 23 739-761 42-64 (126)
207 PRK15122 magnesium-transportin 46.8 68 0.0015 40.7 8.7 106 735-853 548-663 (903)
208 KOG0207 Cation transport ATPas 45.6 76 0.0017 40.6 8.6 107 708-852 702-810 (951)
209 PF13464 DUF4115: Domain of un 45.4 25 0.00054 31.1 3.5 26 43-76 37-62 (77)
210 PLN02177 glycerol-3-phosphate 45.0 12 0.00025 44.4 1.7 39 813-860 177-215 (497)
211 PTZ00253 tryparedoxin peroxida 44.8 53 0.0012 33.7 6.2 25 740-764 57-81 (199)
212 TIGR01647 ATPase-IIIA_H plasma 44.7 98 0.0021 38.4 9.4 104 734-852 439-559 (755)
213 PRK11033 zntA zinc/cadmium/mer 44.6 89 0.0019 38.8 9.0 83 735-849 566-648 (741)
214 TIGR01523 ATPase-IID_K-Na pota 44.5 99 0.0021 40.0 9.7 105 734-852 643-770 (1053)
215 PF13419 HAD_2: Haloacid dehal 44.0 10 0.00022 35.4 0.8 14 712-725 1-14 (176)
216 TIGR01494 ATPase_P-type ATPase 42.6 1.3E+02 0.0029 35.0 9.6 85 735-852 345-431 (499)
217 PRK09456 ?-D-glucose-1-phospha 41.8 15 0.00032 36.9 1.7 16 710-725 1-16 (199)
218 PRK10530 pyridoxal phosphate ( 41.6 45 0.00097 34.6 5.2 37 813-850 200-236 (272)
219 PRK09437 bcp thioredoxin-depen 41.0 1.9E+02 0.0041 27.9 9.0 35 740-777 51-85 (154)
220 COG4996 Predicted phosphatase 40.1 1E+02 0.0023 31.7 7.2 92 710-821 1-107 (164)
221 KOG2134 Polynucleotide kinase 40.0 27 0.00059 40.7 3.5 56 706-762 72-129 (422)
222 COG1011 Predicted hydrolase (H 40.0 17 0.00037 36.4 1.7 18 708-725 3-20 (229)
223 PRK01122 potassium-transportin 39.2 1.6E+02 0.0034 36.7 9.8 88 735-852 443-532 (679)
224 TIGR01459 HAD-SF-IIA-hyp4 HAD- 39.0 25 0.00054 36.7 2.9 94 737-852 138-237 (242)
225 KOG1605 TFIIF-interacting CTD 38.7 15 0.00034 40.3 1.3 69 706-775 86-168 (262)
226 PRK14010 potassium-transportin 38.0 2E+02 0.0042 35.9 10.4 89 734-852 438-528 (673)
227 PF05152 DUF705: Protein of un 37.3 84 0.0018 35.5 6.6 63 703-777 117-179 (297)
228 PRK13191 putative peroxiredoxi 37.1 1.3E+02 0.0029 31.7 7.8 63 712-777 17-88 (215)
229 PRK10513 sugar phosphate phosp 37.1 33 0.00072 35.8 3.4 38 813-851 197-234 (270)
230 TIGR01482 SPP-subfamily Sucros 36.7 40 0.00087 33.9 3.8 38 813-851 150-187 (225)
231 PRK15126 thiamin pyrimidine py 36.6 37 0.0008 35.7 3.7 38 813-851 189-226 (272)
232 COG1225 Bcp Peroxiredoxin [Pos 36.3 93 0.002 32.1 6.3 63 712-777 14-85 (157)
233 cd03018 PRX_AhpE_like Peroxire 35.7 2.9E+02 0.0063 26.0 9.2 35 740-777 49-83 (149)
234 COG2179 Predicted hydrolase of 35.5 1.1E+02 0.0024 32.3 6.7 105 709-852 28-134 (175)
235 TIGR02463 MPGP_rel mannosyl-3- 35.4 58 0.0013 33.1 4.7 38 813-851 180-217 (221)
236 COG0020 UppS Undecaprenyl pyro 34.8 27 0.00058 38.2 2.3 37 517-562 170-211 (245)
237 TIGR01658 EYA-cons_domain eyes 34.6 51 0.0011 36.7 4.4 44 811-855 213-256 (274)
238 PRK10976 putative hydrolase; P 34.6 39 0.00084 35.3 3.4 38 813-851 191-228 (266)
239 PF08924 DUF1906: Domain of un 34.4 18 0.00039 35.8 0.9 40 744-783 8-53 (136)
240 PF08534 Redoxin: Redoxin; In 34.4 1.4E+02 0.0031 28.2 6.9 35 739-776 48-82 (146)
241 PRK01158 phosphoglycolate phos 33.6 41 0.00089 34.1 3.4 39 812-851 157-195 (230)
242 PRK10517 magnesium-transportin 32.7 1.5E+02 0.0033 37.7 8.6 106 735-853 548-663 (902)
243 COG2217 ZntA Cation transport 32.4 1.7E+02 0.0036 36.7 8.7 106 711-854 519-626 (713)
244 PRK03669 mannosyl-3-phosphogly 32.1 50 0.0011 35.1 3.8 38 813-851 188-228 (271)
245 TIGR01652 ATPase-Plipid phosph 31.1 1.7E+02 0.0036 37.8 8.7 29 735-763 629-657 (1057)
246 KOG3107 Predicted haloacid deh 30.9 62 0.0013 38.0 4.4 65 789-855 374-450 (468)
247 PRK10563 6-phosphogluconate ph 30.9 1.2E+02 0.0026 30.7 6.2 17 709-725 4-20 (221)
248 TIGR01486 HAD-SF-IIB-MPGP mann 30.1 52 0.0011 34.5 3.5 38 813-851 177-216 (256)
249 cd02970 PRX_like2 Peroxiredoxi 30.0 3.5E+02 0.0075 25.2 8.6 47 740-795 44-90 (149)
250 TIGR02877 spore_yhbH sporulati 29.4 34 0.00073 39.6 2.1 41 209-258 45-85 (371)
251 COG0561 Cof Predicted hydrolas 27.4 51 0.0011 34.5 2.9 38 813-851 190-227 (264)
252 PF00578 AhpC-TSA: AhpC/TSA fa 27.2 1.2E+02 0.0026 27.4 4.9 64 711-777 8-80 (124)
253 PF08282 Hydrolase_3: haloacid 27.1 54 0.0012 32.5 2.9 38 813-851 187-224 (254)
254 TIGR02461 osmo_MPG_phos mannos 26.9 93 0.002 32.7 4.7 40 813-852 182-222 (225)
255 cd02971 PRX_family Peroxiredox 26.7 4.6E+02 0.0099 24.3 8.8 35 739-776 42-76 (140)
256 TIGR03137 AhpC peroxiredoxin. 26.5 3.3E+02 0.0071 27.8 8.4 53 720-775 24-84 (187)
257 PLN02499 glycerol-3-phosphate 26.3 32 0.00068 41.2 1.2 27 746-776 102-128 (498)
258 KOG2882 p-Nitrophenyl phosphat 26.3 74 0.0016 36.1 4.0 55 710-779 23-77 (306)
259 TIGR01484 HAD-SF-IIB HAD-super 26.2 82 0.0018 31.5 4.0 38 813-851 164-201 (204)
260 TIGR01487 SPP-like sucrose-pho 26.1 70 0.0015 32.5 3.5 38 813-851 148-185 (215)
261 PRK10856 cytoskeletal protein 25.8 50 0.0011 37.4 2.6 27 44-78 291-317 (331)
262 TIGR02540 gpx7 putative glutat 24.7 84 0.0018 30.5 3.7 37 740-776 42-83 (153)
263 TIGR00099 Cof-subfamily Cof su 24.7 78 0.0017 33.0 3.6 38 813-851 189-226 (256)
264 TIGR01458 HAD-SF-IIA-hyp3 HAD- 24.1 1.9E+02 0.0041 31.0 6.4 29 737-765 120-148 (257)
265 PF13701 DDE_Tnp_1_4: Transpos 22.7 71 0.0015 37.4 3.2 32 767-798 197-229 (448)
266 KOG1618 Predicted phosphatase 22.4 1.1E+02 0.0023 35.5 4.3 73 707-793 33-109 (389)
267 KOG2423 Nucleolar GTPase [Gene 21.7 3.6E+02 0.0079 32.4 8.3 129 723-867 214-366 (572)
268 cd02966 TlpA_like_family TlpA- 21.4 97 0.0021 26.5 3.0 35 831-867 79-113 (116)
269 TIGR01657 P-ATPase-V P-type AT 21.3 4.5E+02 0.0099 34.1 10.0 38 734-771 653-690 (1054)
270 PF10698 DUF2505: Protein of u 21.2 2.7E+02 0.0058 27.9 6.4 54 676-738 83-137 (159)
271 TIGR02244 HAD-IG-Ncltidse HAD 20.9 1.4E+02 0.0031 34.2 5.0 36 739-774 186-221 (343)
No 1
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=100.00 E-value=7.3e-153 Score=1276.88 Aligned_cols=721 Identities=37% Similarity=0.547 Sum_probs=490.3
Q ss_pred CcccccccceeccceecccCCCCCCCCCceEEEEEccCCccccCCceEecccccccccccccEEEEEECCeeeeeeeeeC
Q 002531 1 MNVVGKVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGSFQSTPWYVRFGKFQGVLKGAEKVVRITVNGVEANFHMYLD 80 (912)
Q Consensus 1 M~~vg~~~s~is~~~ys~~~p~~~lsGaiDvIvV~q~DG~~~~sPfhVRFGk~qgvl~~~ek~V~i~VNg~~~~~~Mklg 80 (912)
|||||||+++|++ +|+.+|| |||||||||||||||||+|+|||||||||||| ||++++|+|+|.|||+.++|+||||
T Consensus 1 M~yVgrv~~~V~~-~y~sInp-atlsGaIDVIVVeQpDG~~~cSPfhVRFGKf~-Vlk~~eK~V~I~VNG~~~d~~MkL~ 77 (738)
T KOG2116|consen 1 MNYVGRVFSSVSK-LYNSINP-ATLSGAIDVIVVEQPDGNLKCSPFHVRFGKFG-VLKPSEKKVDIFVNGVESDLHMKLG 77 (738)
T ss_pred CchhHHHHHHHHH-HhcccCc-ccccCceeEEEEecCCCCcccccceEEeeeee-EeecCCcEEEEEecCEEecceeEec
Confidence 9999999999997 8888999 69999999999999999999999999999996 9999999999999999999999999
Q ss_pred CCceEEEEEeecCCC---CCCCCCCccccCCCCCcccCCCcccccceeeeeecccCCccccccccccccccccccccccc
Q 002531 81 NSGEAYFIREVDSGK---RNEPNESVELTTDDGSFIDSNSDSRNAVEVCRIEHSVSDSGLTRIRDECDSLSADRFQRAES 157 (912)
Q Consensus 81 ~~Gea~Fv~e~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~n~~~~~~~~~~~s~s~~~~~~~e~~s~~~~~~~~~e~ 157 (912)
++||||||+|++++. +..+.++|+.+..-+ +..| --++-..+.+++.|.
T Consensus 78 dsGeAfFv~Eted~~e~~p~~L~tsp~~s~~~s----------------------~~~~------~~~s~~~sv~e~~et 129 (738)
T KOG2116|consen 78 DSGEAFFVEETEDDVEDVPDELLTSPILSETTS----------------------DTPG------VDDSPALSVLERQET 129 (738)
T ss_pred CCccEEEEEeccchhhcccchhccCCCCccccC----------------------CCCC------CCCCchhhhhccccc
Confidence 999999999999955 444444454433211 0111 112223668899999
Q ss_pred cccccccccccccccccccccccccccccccCCCCCCccccCCCCceEEEEEecceeeeecccccccccccccccCCccc
Q 002531 158 DGDRRLYEYQDEQSSLEASVEMSDYGSNRYQNLDGKPYREAQGSDSEVILVSVDGHVLTAPVSASEQTTENVQLSTPQFH 237 (912)
Q Consensus 158 d~~rr~y~~~~~~~~~~~~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~l~s~dgh~ltap~~~~e~~~e~~ql~~p~fh 237 (912)
+..++++++++++.+- .++++ .+.+ +......+..+......+
T Consensus 130 ~~~~~~vd~~~~~~~~-----s~~~~-~~~~-~~~~~~ed~~d~~~~~~~------------------------------ 172 (738)
T KOG2116|consen 130 ESEGSGVDKNKLRRKK-----SSEED-KRGD-ANESEQEDSLDIGQRSDT------------------------------ 172 (738)
T ss_pred cccccccchhhccccc-----ccccc-cccc-cccccccccccccccccc------------------------------
Confidence 9999999999887632 23333 2222 323223333333332221
Q ss_pred cCCCCCCccccCCCCccCCCCccccccccccccCCCccccCCccccCCccccccccccccCCCccccccCcccccccccc
Q 002531 238 LGPGEGAEFCEDNGEFSSSDNVWGDDYISKFNSSTANVECDNNCTTDDDDLASGRQLVCEGEGEHVCQDGETQNIAIKEE 317 (912)
Q Consensus 238 lg~g~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~e~~~~~~~~~~~~~~~~~~~~ 317 (912)
+.|+.||+++.+|++.++ .|+......+. .. .+.+..++-+-.| +
T Consensus 173 ---~~~~~~~~sd~~~~~t~~----~~~~~~~p~s~---s~------l~~~~~~~t~~~~----------------l--- 217 (738)
T KOG2116|consen 173 ---LPGSSFPESDRDNSPTEN----TVLAFVTPRSD---SE------LEKSGSKRTLKSE----------------L--- 217 (738)
T ss_pred ---CCcccccccccccCCCCC----ccccccccccc---cc------cccCccccccccc----------------c---
Confidence 678899999999999988 23222211100 00 0000000000000 0
Q ss_pred CCCCCCCccccchhhhhhhhhhhhhhhhccCCCCCCC--CCcccccccCCCCcccCCCCCCCCCcccccCcccccccccc
Q 002531 318 GPQTGIGSADIKREDVFQSCLELTALAKQVENSPENS--SLEIPASVENSPESHLLGNKTEDGNKTEDVDKTDDAYVYRK 395 (912)
Q Consensus 318 ~~~~~~~~~~~~~~~~f~s~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (912)
-|-+|++...+..++.+..... .|-.|..-+.. ..-+.+...+|.+- .....
T Consensus 218 ---------------s~~~~~sq~~~~~~s~~~~~~~~~~l~~~~~d~~~-----~~~~~~~~~~t~~~------~~~p~ 271 (738)
T KOG2116|consen 218 ---------------SFSHSLSQRKLSEGSHFQKSNKEDALRRETHDMTR-----RIFLSSKSLETFNA------ATLPI 271 (738)
T ss_pred ---------------ccCCCccccccccccccccccccchhhhccccccc-----cccccccccccccc------cccch
Confidence 1555555554443322211100 11111111000 00000111111110 00111
Q ss_pred CCCCCCCCCCCCC---CCCCCCCccccccccccc-CcccccccccccCCCcccCCcccccccCCCCccccCCC-CCCCCC
Q 002531 396 DDGLSPTCSPCST---SKKSSPDLQVEPDVIEDA-GLDTENVVFDNESIGSVSNETEWKTEQNGTPMAVEGMG-DSLHRP 470 (912)
Q Consensus 396 ~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~ 470 (912)
+..+...|.+... +..+.+.-+.| .| +-+ +--.++.... .+-+.+- ..+. .-.+.+ -+.|++
T Consensus 272 ~~~l~~~~~s~~~s~~~s~~~k~~~r~-----~~~G~d-d~~Ld~~~dy--k~~~~~~---~~~~--~~~g~~~~~~~sv 338 (738)
T KOG2116|consen 272 DKKLQGKSDSELASKVDSPSRKKDKRE-----ANDGAD-DLRLDDEGDY--KNADPEN---SVTS--SKWGELSESRQSV 338 (738)
T ss_pred hhhccccccchhhhcccCccccccchh-----hccCcc-ceeecccccc--ccCCccc---cccc--ccccccccccccc
Confidence 1112222222111 11111111111 00 000 0000000000 0000000 0000 000000 111111
Q ss_pred cCcccCCCCcccCCCCCCCCCCCCCCCCCeEEEecCCCcccCCCCchhhHHHHhhcccCHHHhhcCCcccccCCCeEEEe
Q 002531 471 VHKDDCSKSECVEPQGTTSSEGILTPPGKRFEISLCGSELCSGMGSDAAAEAFDAHRISEDEFKSNSASIIKNENLVIRF 550 (912)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~LSLCGgL~~~~~~~e~s~e~F~eh~Vsye~F~~n~p~Ii~dpnLVvrI 550 (912)
.....-+--| .....+.+.+|||+++. ++.++.+++|++ +|.. .|.|++|+||||||
T Consensus 339 ~sk~~ds~~e-------------~~~~~~~~~~~~~~~~~---~~~e~~ke~F~~------~~~~-~~~I~edenLvvrI 395 (738)
T KOG2116|consen 339 KSKGVDSGVE-------------KTMRLASILCSLCLSLG---DGREALKEKFNE------FSQL-EPGIREDENLVVRI 395 (738)
T ss_pred cccccccccc-------------cccchhhhHhhhhccch---hhHHHHHHHhhh------hhhc-ccceecCCCceEEe
Confidence 1111111000 03345677788888764 589999999998 4555 59999999999999
Q ss_pred CCcccchhhhhHHHHHHHhhCCCCCCCcCCcccccccccccccCCCCCcccCCCCCCcEe-CcCCcccccccccCCCCCC
Q 002531 551 KERYLTWEKAAPIVLGMAAFGLDVSIDPKDAIPVEQEDTQKSKDNDSGITSTPSGRRWRL-WPIPFRRVKTLEHTSSNSS 629 (912)
Q Consensus 551 ~~kYy~W~~AaPlIls~~aFqkpLp~~~~~~l~~e~~~~~k~k~~~~~~~~~~~~~~W~~-W~~~~rr~~~~~~~~s~ss 629 (912)
+++||||..|||+||+ +||+.++++.++++. |.+.+++||+ |+-+....+... ....
T Consensus 396 ~~~y~~w~~aaP~vl~-----~~l~~~~~~~~~~d~--------------~e~~s~~~~~~~~~s~s~t~~~~---~~~~ 453 (738)
T KOG2116|consen 396 GNKYENWTGAAPIVLS-----KPLDKAPVEVIVRDP--------------MESPSGRRTPTSTPSNSKTPDRS---KRFG 453 (738)
T ss_pred cceeechhccCCcccc-----CcccccccceeEecc--------------CCCCCCccccccCCCcccCcccc---cccc
Confidence 9999999999999999 999999999887653 3333443544 642111110000 0000
Q ss_pred cccccccCccccCCCCCCCCCccccCCCCcceeEEecCCHHHHHhcCCCCceeeEEEEEEeeecceeEEEEEEEeecCCC
Q 002531 630 SEEVFVDSESGLLNSQESPESTVKIESPHKQLIRTNVPTSEQIASLNLKDGQNMITFSFSTRVLGTQQVEAHLYLWKWNA 709 (912)
Q Consensus 630 see~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ksLrltSeQL~sLnLk~G~N~V~FsVtt~~qGt~~vea~IYLW~~~~ 709 (912)
++.....+.+. ++ .+ .......+.++++|+||||||||||++||||+|.|.|+|+|+|+|||+|+|+|+||||+|++
T Consensus 454 ~~~~~~~s~s~-~~-~e-~~~~~sse~~~~qy~rtLrltSEQL~sLnLk~G~N~v~FsisT~~~Gt~~c~~~IYlWkWn~ 530 (738)
T KOG2116|consen 454 KEADIASSTSE-QS-PE-ENRSSSSENPRPQYVRTLRLTSEQLKSLNLKDGKNDVVFSISTQYQGTAQCEGNIYLWKWND 530 (738)
T ss_pred cccCCCCCCcc-cC-cc-ccccCCCCCcchhhhhhcccCHHHHhhcCCccCCceeEEEEEecccceEEEeeEEEEEecCC
Confidence 00000000000 00 00 01111223467899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCce
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPV 789 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPv 789 (912)
|||||||||||||||++||++|++||||||.|||+||++|++|||||||||||||+||++||.||+|++|+|+.||+|||
T Consensus 531 kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPV 610 (738)
T KOG2116|consen 531 KIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPV 610 (738)
T ss_pred cEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeeccc
Q 002531 790 VISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHR 869 (912)
Q Consensus 790 LLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~~~ 869 (912)
+|+||+||.|||||||.|+||+|||+||++|++|||+.+||||||||||++||.+|++||||.+|||||||+|||++++.
T Consensus 611 iLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~ 690 (738)
T KOG2116|consen 611 ILSPDSLFAALHREVIERKPEVFKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELL 690 (738)
T ss_pred EeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc-chhhhhccccccCCCCCCCCCC-----CCCcccccCCCCCCCC
Q 002531 870 IDVK-SYTSLHTLVNDMFPPTSLVEQE-----DYNSWNFWRIPLPEIE 911 (912)
Q Consensus 870 ~~~k-SY~~L~elVd~~FPp~~~~~~~-----~fs~f~yWr~plp~id 911 (912)
++++ ||.+|++||||||||++....+ +|++|||||.|+|+++
T Consensus 691 ~~~~~SY~~l~elVd~mFPplS~~~~~~~~~~~fs~fnfWr~p~~~v~ 738 (738)
T KOG2116|consen 691 KTLKSSYVRLNELVDHMFPPLSRSTSDDFPNPEFSNFNFWREPLPEVD 738 (738)
T ss_pred hhhhhhhhhHHHHHHHhCCCccccccccCCccccCCceeecCCCccCC
Confidence 8776 9999999999999999976654 8999999999999985
No 2
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=100.00 E-value=9e-92 Score=760.26 Aligned_cols=243 Identities=45% Similarity=0.796 Sum_probs=227.9
Q ss_pred CcceeEEecCCHHHHHhcCCCCceeeEEEEEEeeecceeEEEEEEEeecCCCeEEEEecCCCcccccccCccCCCCCCCC
Q 002531 658 HKQLIRTNVPTSEQIASLNLKDGQNMITFSFSTRVLGTQQVEAHLYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDW 737 (912)
Q Consensus 658 ~~~y~ksLrltSeQL~sLnLk~G~N~V~FsVtt~~qGt~~vea~IYLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDW 737 (912)
.+.|.+++||+++||..|||++|.|.+.|.|. .|.+.|+++||||.|+.|+||||||||||+||++||+..|+||||
T Consensus 327 ~~d~~~tiklnsdqLr~LnLkyGkn~lkf~V~---g~~a~~t~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdw 403 (580)
T COG5083 327 VTDYNGTIKLNSDQLRNLNLKYGKNLLKFYVE---GGKAIATMYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDW 403 (580)
T ss_pred eecccceEEcCChHHhcccCccCcceEEEEEc---CCccEEEEEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccch
Confidence 46799999999999999999999999999997 356999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHH
Q 002531 738 TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACL 817 (912)
Q Consensus 738 th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L 817 (912)
+|.|||+||..|..|||+|+|||+|+.||++.||.||+.+.|+|+.||+|||+|+|++.+.|||||+|.|+||.||++||
T Consensus 404 th~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiayL 483 (580)
T COG5083 404 THNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAYL 483 (580)
T ss_pred hhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeeccccc-cc-chhhhhccccccCCCCCCCCC-
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRID-VK-SYTSLHTLVNDMFPPTSLVEQ- 894 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~~~~~-~k-SY~~L~elVd~~FPp~~~~~~- 894 (912)
++|+.+|.. .+|||||||||.|||.+|+.||||++||||||.+|||+.+..+. ++ +|.+|+++|||||||+....-
T Consensus 484 ndl~slf~e-~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~t~d 562 (580)
T COG5083 484 NDLKSLFIE-FDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPKTID 562 (580)
T ss_pred HHHHHhhCc-CChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCcccc
Confidence 999999975 47999999999999999999999999999999999999998765 55 999999999999999985432
Q ss_pred ---CCCCcccccCCC
Q 002531 895 ---EDYNSWNFWRIP 906 (912)
Q Consensus 895 ---~~fs~f~yWr~p 906 (912)
..|+.| |..|
T Consensus 563 ~~~~~~~v~--~Sp~ 575 (580)
T COG5083 563 FIDHSFSVF--WSPQ 575 (580)
T ss_pred ccccccccc--CCCc
Confidence 334443 8764
No 3
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=100.00 E-value=4.1e-55 Score=428.13 Aligned_cols=157 Identities=61% Similarity=1.106 Sum_probs=155.0
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCcee
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVV 790 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvL 790 (912)
|||||||||||+||++||++|++|+||+|+||++||++|++|||+||||||||++|+++||.||++++|+|++||+|||+
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~ 80 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL 80 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeec
Q 002531 791 ISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAIS 867 (912)
Q Consensus 791 LSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~ 867 (912)
++|++|+.||+||++.|+|++||++||++|+++||...+|||||||||.+|+.+|+++|||++|||+||++|++++|
T Consensus 81 ~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~~~ 157 (157)
T PF08235_consen 81 LSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVKQE 157 (157)
T ss_pred ECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEecC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999875
No 4
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=100.00 E-value=2.5e-40 Score=320.74 Aligned_cols=156 Identities=64% Similarity=1.094 Sum_probs=152.0
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCcee
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVV 790 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvL 790 (912)
+|||||||||+++|++||+++++|++|.++|++++|++++++||+|+|||||+++++..|+.||..+.|.+++||.||++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred eCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceee
Q 002531 791 ISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAI 866 (912)
Q Consensus 791 LSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~ 866 (912)
+++++++.++.++++.++++.||+++|++|+++||+...|||+|||||++|+.+|+++|||++|||+|||+|++++
T Consensus 81 ~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~~ 156 (157)
T smart00775 81 LSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQ 156 (157)
T ss_pred EcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCcccc
Confidence 9999999999999999999999999999999999988899999999999999999999999999999999999975
No 5
>PF04571 Lipin_N: lipin, N-terminal conserved region; InterPro: IPR007651 Mutations in the lipin gene lead to fatty liver dystrophy in mice. The protein has been shown to be phosphorylated by the TOR Ser/Thr protein kinases in response to insulin stimulation. This entry represents a conserved domain found at the N terminus of the member proteins [, ].
Probab=100.00 E-value=1.9e-39 Score=301.32 Aligned_cols=103 Identities=47% Similarity=0.762 Sum_probs=93.1
Q ss_pred Cccc-ccccceeccceecccCCCCCCCCCceEEEEEccCCccccCCceEecccccccccccccEEEEEECCeeeeeeeee
Q 002531 1 MNVV-GKVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGSFQSTPWYVRFGKFQGVLKGAEKVVRITVNGVEANFHMYL 79 (912)
Q Consensus 1 M~~v-g~~~s~is~~~ys~~~p~~~lsGaiDvIvV~q~DG~~~~sPfhVRFGk~qgvl~~~ek~V~i~VNg~~~~~~Mkl 79 (912)
|||| |++.+.++. +|+.+||+ ||||||||||||||||+|+||||||||||+ ||||+++|+|+|.|||++++++|||
T Consensus 1 M~yv~~~i~~~v~~-~~~~~npa-tlSGAiDVIVV~q~DGs~~sSPFhVRFGk~-~vl~~~ek~V~I~VNG~~~~~~MkL 77 (110)
T PF04571_consen 1 MNYVAGRIFSSVSE-VYNPINPA-TLSGAIDVIVVEQPDGSLKSSPFHVRFGKL-GVLRPREKVVDIEVNGKPVDFHMKL 77 (110)
T ss_pred CceehHhHhhhHHH-HhccCCcc-cccCceeEEEEecCCCCEecCccEEEEcce-eeecccCcEEEEEECCEEcceEEEE
Confidence 9999 899888876 99999995 999999999999999999999999999999 5999999999999999999999999
Q ss_pred CCCceEEEEEeecCCCCC---CCCCCcccc
Q 002531 80 DNSGEAYFIREVDSGKRN---EPNESVELT 106 (912)
Q Consensus 80 g~~Gea~Fv~e~~~~~~~---~~~~~~~~~ 106 (912)
|++|||||+++++++.+. .+.+||+.+
T Consensus 78 g~~GeAfFv~e~~~~~~~vp~~l~tSP~~s 107 (110)
T PF04571_consen 78 GENGEAFFVEETEDDEEEVPDDLATSPIPS 107 (110)
T ss_pred CCCcEEEEEEecCCCcccCcHHHeecCCCC
Confidence 999999999999876433 444555544
No 6
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=99.05 E-value=9.8e-10 Score=119.27 Aligned_cols=170 Identities=18% Similarity=0.250 Sum_probs=125.8
Q ss_pred hcCCCCceeeEEEEEEeeeccee-EE-EEEEEeecCCCeEEEEecCCCcccccccCccCCC-------CCCCCCchHHHH
Q 002531 674 SLNLKDGQNMITFSFSTRVLGTQ-QV-EAHLYLWKWNAKIVISDVDGTITKSDVLGQFMPL-------VGKDWTQSGVAK 744 (912)
Q Consensus 674 sLnLk~G~N~V~FsVtt~~qGt~-~v-ea~IYLW~~~~KVVISDIDGTITkSDvlGhilP~-------lGKDWth~GVAk 744 (912)
-+.+-+|++.|..-+. |.+ .+ .+.+-+.+...-.+|||||.||-.+++.+....+ .-..|+.+||-.
T Consensus 128 ~~~~~~g~~av~lq~e----g~~~~Ae~~~~~v~~~a~igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~ 203 (373)
T COG4850 128 PFPPTKGNHAVRLQSE----GEKIKAEAAPVPVLNRAGIGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSA 203 (373)
T ss_pred ccCCCCCceeEEeecC----CCCcchhcccceeecccceeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHH
Confidence 3566678888776655 532 12 2334455666677999999999999888543221 345788999999
Q ss_pred HHHHHHHCC-CeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHh
Q 002531 745 LFSAIKENG-YQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKL 823 (912)
Q Consensus 745 Ly~~I~~NG-YkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~L 823 (912)
+|+.+++-| ..|+|||..||..-....+||.. ++||.||++|.--+-++ ..+...-..-|..-|+.|..-
T Consensus 204 ~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~-----~~~P~GPl~L~~~g~~~----~~i~~sga~rK~~~l~nil~~ 274 (373)
T COG4850 204 WYRALTNLGDAPVFYVSNSPWQLFPTLQEFITN-----RNFPYGPLLLRRWGGVL----DNIIESGAARKGQSLRNILRR 274 (373)
T ss_pred HHHHHHhcCCCCeEEecCChhHhHHHHHHHHhc-----CCCCCCchhHhhcCCcc----cccccchhhhcccHHHHHHHh
Confidence 999999998 89999999999999999999974 68999999998433222 123334444588888867666
Q ss_pred CCCCCCcEEEeeC-CchhhHHHHHhc-CCCCCcEEEEC
Q 002531 824 FPSDYNPFYAGFG-NRDTDELSYRKI-GIPKGKIFIIN 859 (912)
Q Consensus 824 FP~~~nPFyAGFG-NR~tDV~aYRsV-GIp~~RIFiIn 859 (912)
||.. .|.. .| +.++|..+|.++ ---+.||.-|-
T Consensus 275 ~p~~--kfvL-VGDsGE~DpeIYae~v~~fP~RIl~I~ 309 (373)
T COG4850 275 YPDR--KFVL-VGDSGEHDPEIYAEMVRCFPNRILGIY 309 (373)
T ss_pred CCCc--eEEE-ecCCCCcCHHHHHHHHHhCccceeeEe
Confidence 8763 5777 66 799999999985 77778876553
No 7
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.95 E-value=4.4e-09 Score=109.93 Aligned_cols=129 Identities=20% Similarity=0.172 Sum_probs=94.0
Q ss_pred CCCeEEEEecCCCccccccc--Ccc---CCC----------CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHH
Q 002531 707 WNAKIVISDVDGTITKSDVL--GQF---MPL----------VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTR 771 (912)
Q Consensus 707 ~~~KVVISDIDGTITkSDvl--Ghi---lP~----------lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR 771 (912)
....+||+|||.|+...-.- .|. -++ .++..+-+|+.+||+.++++|++|+|||||+..++..|.
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 35688999999999864310 111 112 455566889999999999999999999999999999999
Q ss_pred HHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc-HHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 772 SFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP-HEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 772 ~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP-e~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
+||..+ ++|. .+.|+| |...+.+++ -.||.+..++|.. .+|++ .+-+||..+|. .|-
T Consensus 155 ~nL~~~-----G~~~------~~~LiL--R~~~d~~~~~~~yKs~~R~~l~~---~GYrI-v~~iGDq~sDl-----~G~ 212 (229)
T TIGR01675 155 DNLINA-----GFTG------WKHLIL--RGLEDSNKTVVTYKSEVRKSLME---EGYRI-WGNIGDQWSDL-----LGS 212 (229)
T ss_pred HHHHHc-----CCCC------cCeeee--cCCCCCCchHhHHHHHHHHHHHh---CCceE-EEEECCChHHh-----cCC
Confidence 999874 4552 245555 553444444 4479999888876 56665 45599988888 466
Q ss_pred CCC-cEEE
Q 002531 851 PKG-KIFI 857 (912)
Q Consensus 851 p~~-RIFi 857 (912)
+.. |+|-
T Consensus 213 ~~~~RtFK 220 (229)
T TIGR01675 213 PPGRRTFK 220 (229)
T ss_pred CccCceee
Confidence 665 8875
No 8
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.91 E-value=1.1e-08 Score=106.70 Aligned_cols=134 Identities=25% Similarity=0.272 Sum_probs=92.8
Q ss_pred CCeEEEEecCCCcccccccCccCCC----CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPL----VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNA 783 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~----lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~ 783 (912)
..+++++|+||||...... .|+ ...+-..+|+.++++.++++|++++++|+|+..++..|.+||... +
T Consensus 157 ~~~~~~~D~dgtl~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~---~-- 228 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGR---SPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT---D-- 228 (300)
T ss_pred CCCEEEEECCCcCcCCCCC---CccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc---C--
Confidence 3579999999999985432 332 223335789999999999999999999999999999999999753 1
Q ss_pred CCCCceeeCC-CCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcE
Q 002531 784 LPNGPVVISP-DGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKI 855 (912)
Q Consensus 784 LP~GPvLLSP-d~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RI 855 (912)
.+--.+.... ..+|| |.....|+.-+.+..+|+++.. +.....++ |||+.+|+.+++++||++-.+
T Consensus 229 ~~f~~i~~~~~~~~~~--~~~~~~kp~p~~~~~~l~~~~~---~~~~~~~~-vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 229 IWFDDLIGRPPDMHFQ--REQGDKRPDDVVKEEIFWEKIA---PKYDVLLA-VDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred CchhhhhCCcchhhhc--ccCCCCCCcHHHHHHHHHHHhc---cCceEEEE-EcCcHHHHHHHHHhCCeEEEe
Confidence 1111222222 22333 3333445555678888877532 12233444 999999999999999987543
No 9
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.89 E-value=1.1e-08 Score=89.95 Aligned_cols=129 Identities=19% Similarity=0.109 Sum_probs=78.7
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCcee
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVV 790 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvL 790 (912)
++|||+||||+..+...+. .......+++.++++.++++|++|+.+|+|. ...++.|+..+ +..-+...++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~~---~~~~~~~~i~ 71 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEEL---GLDDYFDPVI 71 (139)
T ss_pred CeEEccCCceEccCccccc---cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHHc---CCchhhhhee
Confidence 5899999999997654332 3445568899999999999999999999999 56667777653 1111222222
Q ss_pred eCCCCCCc-------hhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 791 ISPDGLFP-------SLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 791 LSPd~Lf~-------ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
.+.+.... ..+...+..+|...+...+.+. +......+++ |||+.+|+.+.+.+|++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-igD~~~d~~~~~~~g~~~ 136 (139)
T cd01427 72 TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKL---LGVDPEEVLM-VGDSLNDIEMAKAAGGLG 136 (139)
T ss_pred ccchhhhhcccccccccccccccCCCCHHHHHHHHHH---cCCChhhEEE-eCCCHHHHHHHHHcCCce
Confidence 22111100 0001112224443344333222 2222344555 999999999999998864
No 10
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.88 E-value=8.8e-09 Score=110.21 Aligned_cols=128 Identities=18% Similarity=0.191 Sum_probs=89.6
Q ss_pred CCeEEEEecCCCcccc-cccC-cc---CCCC-----------CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHH
Q 002531 708 NAKIVISDVDGTITKS-DVLG-QF---MPLV-----------GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTR 771 (912)
Q Consensus 708 ~~KVVISDIDGTITkS-DvlG-hi---lP~l-----------GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR 771 (912)
+..+||+|||+|+... .... |. -++- ++..+-+|+.+||+.++++|++|+|||+|+..++..|.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 4579999999999832 1111 11 1221 23333779999999999999999999999999999999
Q ss_pred HHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcH--HHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcC
Q 002531 772 SFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIG 849 (912)
Q Consensus 772 ~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVG 849 (912)
+||++. ++|. ++.|+| |...+.++.. .+|.+..+++.. .+|+++ +.+||.-+|. .|
T Consensus 180 ~NL~ka-----Gy~~------~~~LiL--R~~~D~~~~~av~yKs~~R~~li~---eGYrIv-~~iGDq~sDl-----~G 237 (275)
T TIGR01680 180 ANLKKA-----GYHT------WEKLIL--KDPQDNSAENAVEYKTAARAKLIQ---EGYNIV-GIIGDQWNDL-----KG 237 (275)
T ss_pred HHHHHc-----CCCC------cceeee--cCCCCCccchhHHHHHHHHHHHHH---cCceEE-EEECCCHHhc-----cC
Confidence 999864 5552 355665 5554444333 478887777665 567655 5599999887 46
Q ss_pred CCC--CcEEE
Q 002531 850 IPK--GKIFI 857 (912)
Q Consensus 850 Ip~--~RIFi 857 (912)
-+. .|.|-
T Consensus 238 ~~~g~~RtFK 247 (275)
T TIGR01680 238 EHRGAIRSFK 247 (275)
T ss_pred CCccCcceec
Confidence 654 47774
No 11
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.76 E-value=1.8e-08 Score=96.81 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=69.8
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHH------------HHHHHHHhh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAY------------LTRSFLLNL 777 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd------------~TR~wL~~~ 777 (912)
|+|++||||||+..+ . .+|. .+-.++.+.+.+++|+++|+.|+++|||+..... .|.+||+++
T Consensus 2 K~i~~DiDGTL~~~~-~---~~y~-~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~ 76 (126)
T TIGR01689 2 KRLVMDLDNTITLTE-N---GDYA-NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQH 76 (126)
T ss_pred CEEEEeCCCCcccCC-C---Cccc-ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHc
Confidence 689999999998642 1 1222 1346789999999999999999999999999877 999999874
Q ss_pred hhCCCCCCCCceeeCCC-CCCchhhhhhcccCcHHHHHHHHHHHHHhC
Q 002531 778 KQDGNALPNGPVVISPD-GLFPSLFREVIRRAPHEFKIACLEDIKKLF 824 (912)
Q Consensus 778 ~Q~G~~LP~GPvLLSPd-~Lf~ALrREvi~RkPe~FKie~L~dIr~LF 824 (912)
++|--.|++... ....-|....-.=+|.+|..--...|+.|.
T Consensus 77 -----~ipYd~l~~~kp~~~~~~~~~dD~~ir~~~~~~~~~~~~~~~~ 119 (126)
T TIGR01689 77 -----NVPYDEIYVGKPWCGHDGFYVDDRAIRPSEFSSLTYDEINTLT 119 (126)
T ss_pred -----CCCCceEEeCCCcCCCCCceecchhhCHHHHHhcCHHHHHHHH
Confidence 677655555431 000001111111145555555556677664
No 12
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.65 E-value=7.9e-09 Score=107.06 Aligned_cols=134 Identities=21% Similarity=0.297 Sum_probs=89.0
Q ss_pred CCCeEEEEecCCCcccc-cccC-ccC---CC----------CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHH
Q 002531 707 WNAKIVISDVDGTITKS-DVLG-QFM---PL----------VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTR 771 (912)
Q Consensus 707 ~~~KVVISDIDGTITkS-DvlG-hil---P~----------lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR 771 (912)
..+.+||+|||+|+..+ ...+ +++ ++ -+++.+-+|+.+||+.++++|.+|+|+|+|+..++..|.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 56789999999998743 1111 111 11 344555779999999999999999999999999999999
Q ss_pred HHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhc--ccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcC
Q 002531 772 SFLLNLKQDGNALPNGPVVISPDGLFPSLFREVI--RRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIG 849 (912)
Q Consensus 772 ~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi--~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVG 849 (912)
.+|+.. | ++. .+.|++ |.... ......+|.+....|.. .+|.+ .+=|||..+|....+..|
T Consensus 150 ~nL~~~---G--~~~------~~~l~l--r~~~~~~~~~~~~yK~~~r~~i~~---~Gy~I-i~~iGD~~~D~~~~~~~~ 212 (229)
T PF03767_consen 150 KNLKKA---G--FPG------WDHLIL--RPDKDPSKKSAVEYKSERRKEIEK---KGYRI-IANIGDQLSDFSGAKTAG 212 (229)
T ss_dssp HHHHHH---T--TST------BSCGEE--EEESSTSS------SHHHHHHHHH---TTEEE-EEEEESSGGGCHCTHHHH
T ss_pred HHHHHc---C--CCc------cchhcc--ccccccccccccccchHHHHHHHH---cCCcE-EEEeCCCHHHhhcccccc
Confidence 999976 3 332 244443 33333 22345589999999987 34554 555999999998844333
Q ss_pred CCCCcEEE
Q 002531 850 IPKGKIFI 857 (912)
Q Consensus 850 Ip~~RIFi 857 (912)
....|.|.
T Consensus 213 ~~~~r~f~ 220 (229)
T PF03767_consen 213 ARAERWFK 220 (229)
T ss_dssp HHHTTEEE
T ss_pred cccceEEE
Confidence 32255443
No 13
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.55 E-value=3.4e-07 Score=96.09 Aligned_cols=124 Identities=20% Similarity=0.260 Sum_probs=83.9
Q ss_pred CeEEEEecCCCcccccc---cC-ccC-C----CC------------CCCC--CchHHHHHHHHHHHCCCeEEEEccChhh
Q 002531 709 AKIVISDVDGTITKSDV---LG-QFM-P----LV------------GKDW--TQSGVAKLFSAIKENGYQLLFLSARAIV 765 (912)
Q Consensus 709 ~KVVISDIDGTITkSDv---lG-hil-P----~l------------GKDW--th~GVAkLy~~I~~NGYkILYLSgRpig 765 (912)
+.+|++||||||+.|.. .| +.. | |+ .... +.+|+.+|++.++++|++|.|+|+|+..
T Consensus 63 p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~ 142 (237)
T PRK11009 63 PMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTAT 142 (237)
T ss_pred CcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34899999999998532 11 110 1 10 0111 2457999999999999999999999988
Q ss_pred hHHHHHHHHHhhhhCCCCCCCC---ceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhH
Q 002531 766 QAYLTRSFLLNLKQDGNALPNG---PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDE 842 (912)
Q Consensus 766 qAd~TR~wL~~~~Q~G~~LP~G---PvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV 842 (912)
....|..||.+. .+||.- ++++.-+. ..|+. |.+++++. ...+. +||+..|+
T Consensus 143 k~~~t~~~Llk~----~gip~~~~f~vil~gd~----------~~K~~--K~~~l~~~--------~i~I~-IGDs~~Di 197 (237)
T PRK11009 143 KTETVSKTLADD----FHIPADNMNPVIFAGDK----------PGQYT--KTQWLKKK--------NIRIF-YGDSDNDI 197 (237)
T ss_pred ccHHHHHHHHHH----cCCCcccceeEEEcCCC----------CCCCC--HHHHHHhc--------CCeEE-EcCCHHHH
Confidence 888899999863 567633 33332221 13444 55555432 12233 89999999
Q ss_pred HHHHhcCCCCCcEEE
Q 002531 843 LSYRKIGIPKGKIFI 857 (912)
Q Consensus 843 ~aYRsVGIp~~RIFi 857 (912)
.+-+++|+.+-+++-
T Consensus 198 ~aA~~AGi~~I~v~~ 212 (237)
T PRK11009 198 TAAREAGARGIRILR 212 (237)
T ss_pred HHHHHcCCcEEEEec
Confidence 999999999887754
No 14
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=98.53 E-value=4e-07 Score=84.76 Aligned_cols=91 Identities=25% Similarity=0.422 Sum_probs=72.7
Q ss_pred eEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCC-CCchhhhhhcccCcH-HHHHHHHHHHHHhCCCCCCcEE
Q 002531 755 QLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDG-LFPSLFREVIRRAPH-EFKIACLEDIKKLFPSDYNPFY 832 (912)
Q Consensus 755 kILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~-Lf~ALrREvi~RkPe-~FKie~L~dIr~LFP~~~nPFy 832 (912)
+|+|||+.||.+....++||.. ++||.||++|..-+ .+.. ..+... ..|...|++|.+.||. .+|+
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~-----~~~P~G~~~Lr~~~~~~~~-----~~~~~~~~~K~~~i~~i~~~fP~--~kfi 68 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRR-----NGFPAGPLLLRDYGPSLSG-----LFKSGAEEHKRDNIERILRDFPE--RKFI 68 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHh-----cCCCCCceEcccCCccccc-----cccCCchhHHHHHHHHHHHHCCC--CcEE
Confidence 5899999999999999999985 58999999998652 1111 122233 4799999999999997 4677
Q ss_pred EeeC-CchhhHHHHHhc-CCCCCcEEEE
Q 002531 833 AGFG-NRDTDELSYRKI-GIPKGKIFII 858 (912)
Q Consensus 833 AGFG-NR~tDV~aYRsV-GIp~~RIFiI 858 (912)
. +| |.++|+.+|.++ ---++||-.|
T Consensus 69 L-IGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 69 L-IGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred E-EeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 7 78 799999999997 6778887655
No 15
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.39 E-value=7.6e-07 Score=94.99 Aligned_cols=115 Identities=17% Similarity=0.289 Sum_probs=81.3
Q ss_pred CCeEEEEecCCCccccccc-----CccCCCCCCCC----------CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHH
Q 002531 708 NAKIVISDVDGTITKSDVL-----GQFMPLVGKDW----------TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRS 772 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvl-----GhilP~lGKDW----------th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~ 772 (912)
.+.+||+|||+|+..+..- -+-.||-.++| .-+|+.++++.++++|++++|+|+|+...+..|..
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 4689999999999866521 12345544555 35799999999999999999999999999999999
Q ss_pred HHHhhhhCCCCCCC---CceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHh
Q 002531 773 FLLNLKQDGNALPN---GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRK 847 (912)
Q Consensus 773 wL~~~~Q~G~~LP~---GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRs 847 (912)
+|+.+ +||. -+|++..+ ++ .|-..+..|.. ++++ ++-|||+..|......
T Consensus 154 ~Lkk~-----Gi~~~~~d~lllr~~------------~~---~K~~rr~~I~~----~y~I-vl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 154 NLKRF-----GFPQADEEHLLLKKD------------KS---SKESRRQKVQK----DYEI-VLLFGDNLLDFDDFFY 206 (266)
T ss_pred HHHHc-----CcCCCCcceEEeCCC------------CC---CcHHHHHHHHh----cCCE-EEEECCCHHHhhhhhc
Confidence 99864 5553 34444321 11 24445556653 4555 4559999999976443
No 16
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.31 E-value=1.9e-06 Score=79.92 Aligned_cols=117 Identities=23% Similarity=0.280 Sum_probs=71.9
Q ss_pred eEEEEecCCCcccccccCccCCCCC---CCCCchHHHHHHHHHHHCCCeEEEEccChhhh-----HHHHHHHHHhhhhCC
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVG---KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQ-----AYLTRSFLLNLKQDG 781 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lG---KDWth~GVAkLy~~I~~NGYkILYLSgRpigq-----Ad~TR~wL~~~~Q~G 781 (912)
|+|++|+||||+.+ .++.. .-...+|+.++++.|++.||++..+|.++... ...++.+|..+
T Consensus 1 k~~~~D~dgtL~~~------~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~---- 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDD------VPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL---- 70 (132)
T ss_pred CEEEEeCCCceecC------CCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC----
Confidence 68999999999953 23322 22247899999999999999999999998544 34455566543
Q ss_pred CCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCC-CCCCcEEEeeCC-chhhHHHHHhcCCCC
Q 002531 782 NALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFP-SDYNPFYAGFGN-RDTDELSYRKIGIPK 852 (912)
Q Consensus 782 ~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP-~~~nPFyAGFGN-R~tDV~aYRsVGIp~ 852 (912)
+++.=.+.. . . ..+|| |-+.+..+...++ -...-.+. +|| ...|+.+-+++|+..
T Consensus 71 -~l~~~~~~~------~--~---~~~KP---~~~~~~~~~~~~~~~~~~~~v~-IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 71 -GVPIDVLYA------C--P---HCRKP---KPGMFLEALKRFNEIDPEESVY-VGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred -CCCEEEEEE------C--C---CCCCC---ChHHHHHHHHHcCCCChhheEE-EcCCCcccHHHHHHCCCeE
Confidence 232100011 1 0 12344 2233333333331 11122333 799 599999999999975
No 17
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.15 E-value=1.4e-05 Score=84.00 Aligned_cols=125 Identities=19% Similarity=0.222 Sum_probs=76.7
Q ss_pred CeEEEEecCCCcccccc---cCccCC-C------CCCC-C------------CchHHHHHHHHHHHCCCeEEEEccChhh
Q 002531 709 AKIVISDVDGTITKSDV---LGQFMP-L------VGKD-W------------TQSGVAKLFSAIKENGYQLLFLSARAIV 765 (912)
Q Consensus 709 ~KVVISDIDGTITkSDv---lGhilP-~------lGKD-W------------th~GVAkLy~~I~~NGYkILYLSgRpig 765 (912)
+-+|||||||||..|.. +|.-.+ . .|.. | +.+++.+|++.++++|+++.|+|+|...
T Consensus 63 p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~ 142 (237)
T TIGR01672 63 PIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPG 142 (237)
T ss_pred CeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 34899999999999976 443211 0 1111 2 1235999999999999999999999654
Q ss_pred hHHHHHHHHHhhhhCCCCCCCC-ceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHH
Q 002531 766 QAYLTRSFLLNLKQDGNALPNG-PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELS 844 (912)
Q Consensus 766 qAd~TR~wL~~~~Q~G~~LP~G-PvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~a 844 (912)
....|..-|.++ .+||.- ++++..+. ...++|+ |..++++. +..+. |||+.+|+.+
T Consensus 143 k~~~~a~~ll~~----lGi~~~f~~i~~~d~--------~~~~Kp~--~~~~l~~~--------~i~i~-vGDs~~DI~a 199 (237)
T TIGR01672 143 KTDTVSKTLAKN----FHIPAMNPVIFAGDK--------PGQYQYT--KTQWIQDK--------NIRIH-YGDSDNDITA 199 (237)
T ss_pred cCHHHHHHHHHH----hCCchheeEEECCCC--------CCCCCCC--HHHHHHhC--------CCeEE-EeCCHHHHHH
Confidence 333333333321 344431 23332211 1224565 44444321 22334 8999999999
Q ss_pred HHhcCCCCCcEE
Q 002531 845 YRKIGIPKGKIF 856 (912)
Q Consensus 845 YRsVGIp~~RIF 856 (912)
-+++|+.+-++.
T Consensus 200 Ak~AGi~~I~V~ 211 (237)
T TIGR01672 200 AKEAGARGIRIL 211 (237)
T ss_pred HHHCCCCEEEEE
Confidence 999999987763
No 18
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.07 E-value=2.1e-05 Score=75.41 Aligned_cols=128 Identities=19% Similarity=0.301 Sum_probs=73.5
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCC-CchHHHHHHHHHHHCCCeEEEEccChhh------h------HHHHHHHHHh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDW-TQSGVAKLFSAIKENGYQLLFLSARAIV------Q------AYLTRSFLLN 776 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDW-th~GVAkLy~~I~~NGYkILYLSgRpig------q------Ad~TR~wL~~ 776 (912)
+++|+|+||||+..... .... ...+| ..+|+.+++..|+++||++..+|+.+.. . ...++..|+.
T Consensus 1 ~~~~~d~dgtl~~~~~~-~~~~-~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (147)
T TIGR01656 1 PALFLDRDGVINEDTVS-DYPR-SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ 78 (147)
T ss_pred CeEEEeCCCceeccCCc-ccCC-CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence 58999999999974321 1111 12233 3789999999999999999999997631 1 2345555554
Q ss_pred hhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 777 LKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 777 ~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
. +++.=...... ... ....-.+||+ .+.+..+...++....-.+. +||+..|+.+=+++|+..
T Consensus 79 ~-----~l~~~~~~~~~--~~~--~~~~~~~KP~---~~~~~~~~~~~~~~~~e~i~-IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 79 L-----GVAVDGVLFCP--HHP--ADNCSCRKPK---PGLILEALKRLGVDASRSLV-VGDRLRDLQAARNAGLAA 141 (147)
T ss_pred C-----CCceeEEEECC--CCC--CCCCCCCCCC---HHHHHHHHHHcCCChHHEEE-EcCCHHHHHHHHHCCCCE
Confidence 2 33210011110 000 0011123553 33344443333322233444 799999999999999964
No 19
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.02 E-value=3.1e-05 Score=75.29 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=61.5
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC--CceeeCCCCCCchhhhhh---cccCcHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN--GPVVISPDGLFPSLFREV---IRRAPHEFK 813 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~--GPvLLSPd~Lf~ALrREv---i~RkPe~FK 813 (912)
.+|+.++++.++++||++..+|+....... .+|+.+ | +.. +-.++..+.-+. ..+. ....+ |
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~---~~l~~~---g--~~~~~~~~~~~~~~g~~--~p~~~~~~~~~~---k 148 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAK---KVAEKL---N--PDYVYSNELVFDEKGFI--QPDGIVRVTFDN---K 148 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHHHh---C--CCeEEEEEEEEcCCCeE--ecceeeEEcccc---H
Confidence 458889999999999999999998655444 444432 1 110 000010000000 0000 00011 4
Q ss_pred HHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCcee
Q 002531 814 IACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVA 865 (912)
Q Consensus 814 ie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~ 865 (912)
.+.++.+...+.-.....++ +||+.+|+.+.+.+|++ |.+|+.+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~i~-iGDs~~D~~~a~~ag~~----~a~~~~~~~~ 195 (201)
T TIGR01491 149 GEAVERLKRELNPSLTETVA-VGDSKNDLPMFEVADIS----ISLGDEGHAD 195 (201)
T ss_pred HHHHHHHHHHhCCCHHHEEE-EcCCHhHHHHHHhcCCe----EEECCCccch
Confidence 44455444332211223455 89999999999999995 7899988874
No 20
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.98 E-value=4.6e-05 Score=74.90 Aligned_cols=130 Identities=17% Similarity=0.184 Sum_probs=73.7
Q ss_pred eEEEEecCCCcccccccCccCCCCCC--CC-CchHHHHHHHHHHHCCCeEEEEccChh--------hhHHHHHHHHHhhh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGK--DW-TQSGVAKLFSAIKENGYQLLFLSARAI--------VQAYLTRSFLLNLK 778 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGK--DW-th~GVAkLy~~I~~NGYkILYLSgRpi--------gqAd~TR~wL~~~~ 778 (912)
|++.+|.||||+.. .+|+.. +| .-+||.++++.|+++||++..+|+-+. ...+..+.|+.++.
T Consensus 2 ~~~~~D~Dgtl~~~------~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l 75 (176)
T TIGR00213 2 KAIFLDRDGTINID------HGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL 75 (176)
T ss_pred CEEEEeCCCCEeCC------CCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH
Confidence 78999999999962 144332 55 367999999999999999999997663 12234455655432
Q ss_pred hCCCCCCCCceeeCCCCCCc--hhhhhhcccCcH--HHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 779 QDGNALPNGPVVISPDGLFP--SLFREVIRRAPH--EFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 779 Q~G~~LP~GPvLLSPd~Lf~--ALrREvi~RkPe--~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+. ..++.--+..++..... -+......+||+ .|+.. ++++ .-...-.+. +||+.+|+.+-+++|++.
T Consensus 76 ~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a-~~~~----~~~~~~~v~-VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 76 AE-RDVDLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQA-RKEL----HIDMAQSYM-VGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred HH-cCCCccEEEECCCCCcccccccCCCCCCCCCHHHHHHH-HHHc----CcChhhEEE-EcCCHHHHHHHHHCCCcE
Confidence 21 12221111222111000 000112234553 33332 2222 111223344 899999999999999974
No 21
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.93 E-value=8.2e-05 Score=73.75 Aligned_cols=126 Identities=18% Similarity=0.394 Sum_probs=78.0
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCC--chHHHHHHHHHHHCCCeEEEEccChhh---------hHHHHHHHHHh
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWT--QSGVAKLFSAIKENGYQLLFLSARAIV---------QAYLTRSFLLN 776 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWt--h~GVAkLy~~I~~NGYkILYLSgRpig---------qAd~TR~wL~~ 776 (912)
..|++++|+||||+..+. .+..+.--.+|. .+||.++++.|+++||++..+|..+.. ....++..|..
T Consensus 12 ~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRS-GKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred cCcEEEEeCCCceEecCC-CCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 479999999999998542 123444566885 699999999999999999999976542 22345666664
Q ss_pred hhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHHHHHHHHhCCCCCCcEEEeeCCch--------hhHHHHH
Q 002531 777 LKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIACLEDIKKLFPSDYNPFYAGFGNRD--------TDELSYR 846 (912)
Q Consensus 777 ~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~L~dIr~LFP~~~nPFyAGFGNR~--------tDV~aYR 846 (912)
+ +++.- ..+..+ ....+|| +.|+. +++.+.....+ ...+| +||+. +|+.+=+
T Consensus 91 ~-----gl~~~-~ii~~~--------~~~~~KP~p~~~~~-~~~~~~~~~~~-~~~v~--VGD~~~~~~~~~~~Di~aA~ 152 (166)
T TIGR01664 91 L-----KVPIQ-VLAATH--------AGLYRKPMTGMWEY-LQSQYNSPIKM-TRSFY--VGDAAGRKLDFSDADIKFAK 152 (166)
T ss_pred c-----CCCEE-EEEecC--------CCCCCCCccHHHHH-HHHHcCCCCCc-hhcEE--EECCCCCCCCCchhHHHHHH
Confidence 3 34431 222221 1123454 34442 22222100111 23445 57875 6999999
Q ss_pred hcCCCC
Q 002531 847 KIGIPK 852 (912)
Q Consensus 847 sVGIp~ 852 (912)
++|++.
T Consensus 153 ~aGi~~ 158 (166)
T TIGR01664 153 NLGLEF 158 (166)
T ss_pred HCCCCc
Confidence 999986
No 22
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.78 E-value=5.2e-05 Score=75.58 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=56.0
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceee----CCCCCCch-hhhhhcc--cCcHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVI----SPDGLFPS-LFREVIR--RAPHE 811 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLL----SPd~Lf~A-LrREvi~--RkPe~ 811 (912)
.+|+.++++.++++|+++..+|+... ...+.++..+ +++. ++- ..++.+.. ....... .||..
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~---~~~~~~l~~~-----~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFD---LFAEHVKDKL-----GLDA--AFANRLEVEDGKLTGLVEGPIVDASYKGKT 156 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHHc-----CCCc--eEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence 45888999999999999999999653 4444445432 2221 110 00111100 0001111 13443
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCC
Q 002531 812 FKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPK 861 (912)
Q Consensus 812 FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpk 861 (912)
|+ .+...+.-...-.++ +||..+|+.+.+++|++ +.+|+.
T Consensus 157 ~~-----~~~~~~~~~~~~~i~-iGDs~~Di~aa~~ag~~----i~~~~~ 196 (219)
T TIGR00338 157 LL-----ILLRKEGISPENTVA-VGDGANDLSMIKAAGLG----IAFNAK 196 (219)
T ss_pred HH-----HHHHHcCCCHHHEEE-EECCHHHHHHHHhCCCe----EEeCCC
Confidence 33 332222111223444 89999999999999997 356664
No 23
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.76 E-value=0.00018 Score=71.24 Aligned_cols=131 Identities=23% Similarity=0.242 Sum_probs=76.2
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCC-CchHHHHHHHHHHHCCCeEEEEccChh------------hhHHHHHHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDW-TQSGVAKLFSAIKENGYQLLFLSARAI------------VQAYLTRSFLL 775 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDW-th~GVAkLy~~I~~NGYkILYLSgRpi------------gqAd~TR~wL~ 775 (912)
.|++.+|.||||+..-. ++.....-.+| ..+||.++++.|+++||++..+|.-+- .....++..|.
T Consensus 1 ~~~~~~d~dg~l~~~~~-~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~ 79 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPP-SDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR 79 (161)
T ss_pred CCEEEEeCCCCccccCC-CccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 47999999999998311 11111121233 578999999999999999999998531 23344555555
Q ss_pred hhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 776 NLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 776 ~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
.+ +++---++++|... ..+.-.+||. .+.+..+...+.-.....+. +||+.+|+.+=+++|+.+-
T Consensus 80 ~~-----gl~fd~ii~~~~~~----~~~~~~~KP~---~~~~~~~~~~~~~~~~e~l~-IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 80 SQ-----GIIFDDVLICPHFP----DDNCDCRKPK---IKLLEPYLKKNLIDKARSYV-IGDRETDMQLAENLGIRGI 144 (161)
T ss_pred HC-----CCceeEEEECCCCC----CCCCCCCCCC---HHHHHHHHHHcCCCHHHeEE-EeCCHHHHHHHHHCCCeEE
Confidence 32 34311122332110 1122345663 33334333333222222444 7899999999999999864
No 24
>PLN02954 phosphoserine phosphatase
Probab=97.66 E-value=0.00011 Score=73.59 Aligned_cols=134 Identities=19% Similarity=0.286 Sum_probs=75.5
Q ss_pred eecCCCeEEEEecCCCcccccccCccC---------------------CC----------CCCCC-------------Cc
Q 002531 704 LWKWNAKIVISDVDGTITKSDVLGQFM---------------------PL----------VGKDW-------------TQ 739 (912)
Q Consensus 704 LW~~~~KVVISDIDGTITkSDvlGhil---------------------P~----------lGKDW-------------th 739 (912)
||.. .|+||||.||||++++..-.++ ++ +...+ ..
T Consensus 8 ~~~~-~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 86 (224)
T PLN02954 8 LWRS-ADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPPRLS 86 (224)
T ss_pred HHcc-CCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccCCCC
Confidence 4543 7999999999999988642211 11 00010 24
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCce-----eeCCCCCCchhh-hhhcccCcHHHH
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPV-----VISPDGLFPSLF-REVIRRAPHEFK 813 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPv-----LLSPd~Lf~ALr-REvi~RkPe~FK 813 (912)
+|+.++++.++++|+++..+|+........ .|..+ +++.-.+ .+..++.+.... .+.... ..-|
T Consensus 87 pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~---~l~~~-----gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~--~~~K 156 (224)
T PLN02954 87 PGIPELVKKLRARGTDVYLVSGGFRQMIAP---VAAIL-----GIPPENIFANQILFGDSGEYAGFDENEPTSR--SGGK 156 (224)
T ss_pred ccHHHHHHHHHHCCCEEEEECCCcHHHHHH---HHHHh-----CCChhhEEEeEEEEcCCCcEECccCCCcccC--CccH
Confidence 799999999999999999999987654444 44432 2321111 122222111110 000000 1125
Q ss_pred HHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 814 IACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 814 ie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.+.++.++..... ...++ |||+.+|+.+.++.|+.
T Consensus 157 ~~~i~~~~~~~~~--~~~i~-iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 157 AEAVQHIKKKHGY--KTMVM-IGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHHHHHHHcCC--CceEE-EeCCHHHHHhhhcCCCC
Confidence 5666666554322 23444 89999999996665664
No 25
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.64 E-value=0.00059 Score=67.22 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=71.1
Q ss_pred CCeEEEEecCCCcccccccCccCCCC--CCCC-CchHHHHHHHHHHHCCCeEEEEccChh--------hhHHHHHHHHHh
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLV--GKDW-TQSGVAKLFSAIKENGYQLLFLSARAI--------VQAYLTRSFLLN 776 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~l--GKDW-th~GVAkLy~~I~~NGYkILYLSgRpi--------gqAd~TR~wL~~ 776 (912)
.-|++++|.||||... + .++. -..| ..+|+.++++.|+++||++..+|..+- .+....+.|+..
T Consensus 2 ~~~~~~~d~~~t~~~~---~--~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~ 76 (181)
T PRK08942 2 SMKAIFLDRDGVINVD---S--DGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDW 76 (181)
T ss_pred CccEEEEECCCCcccC---C--ccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 3589999999999762 1 1221 1123 478999999999999999999998752 122222344433
Q ss_pred hhhCCCCCCCCceeeCCCCCCchhhhhhcccCcH--HHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 777 LKQDGNALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 777 ~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.-+ ..+++--.++.+.+.. -.++-.+||+ .|.. +++.+. -...-.+. +||+..|+.+-+++|++
T Consensus 77 ~l~-~~g~~f~~i~~~~~~~----~~~~~~~KP~p~~~~~-~~~~l~----~~~~~~~~-VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 77 SLA-DRGGRLDGIYYCPHHP----EDGCDCRKPKPGMLLS-IAERLN----IDLAGSPM-VGDSLRDLQAAAAAGVT 142 (181)
T ss_pred HHH-HcCCccceEEECCCCC----CCCCcCCCCCHHHHHH-HHHHcC----CChhhEEE-EeCCHHHHHHHHHCCCe
Confidence 211 1122211222222110 0011234553 3332 222222 11123444 89999999999999994
No 26
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.64 E-value=0.00016 Score=70.34 Aligned_cols=111 Identities=15% Similarity=0.227 Sum_probs=65.5
Q ss_pred eEEEEecCCCccccccc-CccCCCCCCCC-CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC
Q 002531 710 KIVISDVDGTITKSDVL-GQFMPLVGKDW-TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG 787 (912)
Q Consensus 710 KVVISDIDGTITkSDvl-GhilP~lGKDW-th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G 787 (912)
|+|++||||||+...+. ..-...+++ | ..++. +.+.|+++||++..+|+++.... +..|..+ +++
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~-~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~---~~~l~~~-----gi~-- 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKA-FNVRDGY--GIRCALKSGIEVAIITGRKAKLV---EDRCKTL-----GIT-- 68 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEE-EechhHH--HHHHHHHCCCEEEEEECCCCHHH---HHHHHHc-----CCC--
Confidence 78999999999973221 000111222 3 22333 79999999999999999987544 4455543 121
Q ss_pred ceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 788 PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 788 PvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.+|.. ...+| +.+..+...+.-.....++ +||..+|+.+.+.+|++
T Consensus 69 -------~~~~~-----~~~k~-----~~~~~~~~~~~~~~~~~~~-vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 -------HLYQG-----QSNKL-----IAFSDILEKLALAPENVAY-IGDDLIDWPVMEKVGLS 114 (154)
T ss_pred -------EEEec-----ccchH-----HHHHHHHHHcCCCHHHEEE-ECCCHHHHHHHHHCCCe
Confidence 11111 12233 3333333322212223444 89999999999999996
No 27
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.61 E-value=0.00013 Score=74.85 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=62.2
Q ss_pred chHHHHHHH-HHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCC----C-CCCchhhhhhcccCcHHH
Q 002531 739 QSGVAKLFS-AIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISP----D-GLFPSLFREVIRRAPHEF 812 (912)
Q Consensus 739 h~GVAkLy~-~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSP----d-~Lf~ALrREvi~RkPe~F 812 (912)
.+|+.++.+ .+++.|++++.+|+.+......+.+.+.... +. -++.+. + +.+ .. ..-..++
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~--~~-----~~i~t~le~~~gg~~---~g-~~c~g~~-- 162 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH--RL-----NLIASQIERGNGGWV---LP-LRCLGHE-- 162 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc--cC-----cEEEEEeEEeCCceE---cC-ccCCChH--
Confidence 357777775 6777899999999998877666654421110 00 011110 1 000 00 0011122
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceee
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAI 866 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~ 866 (912)
|...|+ ..+.......| +|||..+|..+...+|-| +.|||+..+++
T Consensus 163 Kv~rl~---~~~~~~~~~~~-aYsDS~~D~pmL~~a~~~----~~Vnp~~~L~~ 208 (210)
T TIGR01545 163 KVAQLE---QKIGSPLKLYS-GYSDSKQDNPLLAFCEHR----WRVSKRGELQQ 208 (210)
T ss_pred HHHHHH---HHhCCChhheE-EecCCcccHHHHHhCCCc----EEECcchHhcc
Confidence 444444 33332222334 499999999999999988 78999988764
No 28
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.56 E-value=0.00022 Score=71.20 Aligned_cols=113 Identities=15% Similarity=0.218 Sum_probs=64.8
Q ss_pred CCeEEEEecCCCcccccccCccCCC--CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPL--VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALP 785 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~--lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP 785 (912)
.-|+|++|||||||...+. ..+. .-..|.... ....+.++++|+++.++|+|+... ++..|+.+ +++
T Consensus 20 ~ikli~~D~Dgtl~~~~i~--~~~~~~~~~~~~~~d-~~~i~~L~~~Gi~v~I~T~~~~~~---v~~~l~~l-----gl~ 88 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIY--MGNNGEELKAFNVRD-GYGIRCLLTSGIEVAIITGRKSKL---VEDRMTTL-----GIT 88 (183)
T ss_pred CceEEEEcCCeeeecCEEE--EcCCCCEEEEEeccc-hHHHHHHHHCCCEEEEEeCCCcHH---HHHHHHHc-----CCc
Confidence 4789999999999985321 1111 011122100 123455567999999999997644 45566543 111
Q ss_pred CCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 786 NGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 786 ~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.+|. .. ++ |.+.+..+...+.-...-.+. +||..+|+.+.+.+|++
T Consensus 89 ---------~~f~-----g~--~~---k~~~l~~~~~~~gl~~~ev~~-VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 89 ---------HLYQ-----GQ--SN---KLIAFSDLLEKLAIAPEQVAY-IGDDLIDWPVMEKVGLS 134 (183)
T ss_pred ---------eeec-----CC--Cc---HHHHHHHHHHHhCCCHHHEEE-ECCCHHHHHHHHHCCCe
Confidence 1121 01 11 445555554433222233444 89999999999999986
No 29
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.56 E-value=0.00038 Score=68.50 Aligned_cols=113 Identities=20% Similarity=0.277 Sum_probs=63.0
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhccc-CcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRR-APHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~R-kPe~FKie~L 817 (912)
.+|+.++++.++++|+++..+|+.+.......-+.|.- .+.+.. .+....++.+. .+.... .-..-|...+
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~----~~~~~~-~l~~~~~g~~~---g~~~~~~~~g~~K~~~l 160 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGI----DNAIGT-RLEESEDGIYT---GNIDGNNCKGEGKVHAL 160 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCC----cceEec-ceEEcCCCEEe---CCccCCCCCChHHHHHH
Confidence 34777888888899999999999887655544333211 001110 01111222111 111100 0012377766
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCce
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEV 864 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel 864 (912)
+.+.....-.....++ |||..+|+.+.+.+|.+ +.|||+.++
T Consensus 161 ~~~~~~~~~~~~~~~~-~gDs~~D~~~~~~a~~~----~~v~~~~~l 202 (202)
T TIGR01490 161 AELLAEEQIDLKDSYA-YGDSISDLPLLSLVGHP----YVVNPDKKL 202 (202)
T ss_pred HHHHHHcCCCHHHcEe-eeCCcccHHHHHhCCCc----EEeCCCCCC
Confidence 6665432222223444 99999999999999977 478887653
No 30
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.40 E-value=0.00019 Score=72.60 Aligned_cols=97 Identities=13% Similarity=0.244 Sum_probs=59.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCce-----eeCCCCCCchhhhhhcccCcHH--
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPV-----VISPDGLFPSLFREVIRRAPHE-- 811 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPv-----LLSPd~Lf~ALrREvi~RkPe~-- 811 (912)
.+|+.+++..++++|+++..+|+... ..++.+|..+ . +.-++ .+..+.+. .....|..
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~~-----~-~~~~i~~n~~~~~~~~~~------~~~p~~~~~~ 136 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMD---FFVYPLLEGI-----V-EKDRIYCNEADFSNEYIH------IDWPHPCDGT 136 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHhh-----C-CcccEEeceeEeeCCeeE------EeCCCCCccc
Confidence 46889999999999999999999854 3444455432 0 11122 22211111 01112222
Q ss_pred -------HHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEEC
Q 002531 812 -------FKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIIN 859 (912)
Q Consensus 812 -------FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiIn 859 (912)
-|..++++++.. . ...++ +||..+|+.+-+.+|+ +|.-+
T Consensus 137 ~~~~cg~~K~~~l~~~~~~--~--~~~i~-iGDg~~D~~~a~~Ad~----~~ar~ 182 (214)
T TIGR03333 137 CQNQCGCCKPSLIRKLSEP--N--DYHIV-IGDSVTDVEAAKQSDL----CFARD 182 (214)
T ss_pred cccCCCCCHHHHHHHHhhc--C--CcEEE-EeCCHHHHHHHHhCCe----eEehH
Confidence 378888887741 2 23444 8999999999998887 55533
No 31
>PRK10976 putative hydrolase; Provisional
Probab=97.37 E-value=0.0011 Score=68.47 Aligned_cols=53 Identities=23% Similarity=0.374 Sum_probs=41.8
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
|+|++||||||..++. .+ .+...+.+++++++|++|+++|||+.... +.++..
T Consensus 3 kli~~DlDGTLl~~~~--~i---------s~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~ 55 (266)
T PRK10976 3 QVVASDLDGTLLSPDH--TL---------SPYAKETLKLLTARGIHFVFATGRHHVDV---GQIRDN 55 (266)
T ss_pred eEEEEeCCCCCcCCCC--cC---------CHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHh
Confidence 7999999999998642 11 34578899999999999999999998743 445544
No 32
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.35 E-value=0.001 Score=67.35 Aligned_cols=92 Identities=15% Similarity=0.241 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCcee-----eCCCCCCchhhhhhcccCcH---
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVV-----ISPDGLFPSLFREVIRRAPH--- 810 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvL-----LSPd~Lf~ALrREvi~RkPe--- 810 (912)
.+|+.+++..++++|+++..+|+.... .++.+|..+ ++.-.+. +..+.+ . .....|.
T Consensus 76 ~pG~~e~l~~l~~~g~~~~IvS~~~~~---~i~~il~~~------~~~~~i~~n~~~~~~~~~-~-----~~kp~p~~~~ 140 (219)
T PRK09552 76 REGFHEFVQFVKENNIPFYVVSGGMDF---FVYPLLQGL------IPKEQIYCNGSDFSGEYI-T-----ITWPHPCDEH 140 (219)
T ss_pred CcCHHHHHHHHHHcCCeEEEECCCcHH---HHHHHHHHh------CCcCcEEEeEEEecCCee-E-----EeccCCcccc
Confidence 559999999999999999999998643 444555431 2222222 111111 0 0011121
Q ss_pred ------HHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 811 ------EFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 811 ------~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
.-|..+++++.. .. ...++ +||+.+|+.+-+++|+
T Consensus 141 ~~~~~~~~K~~~l~~~~~---~~-~~~i~-iGDs~~Di~aa~~Ag~ 181 (219)
T PRK09552 141 CQNHCGCCKPSLIRKLSD---TN-DFHIV-IGDSITDLEAAKQADK 181 (219)
T ss_pred ccccCCCchHHHHHHhcc---CC-CCEEE-EeCCHHHHHHHHHCCc
Confidence 126777776653 11 23444 8999999999999999
No 33
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.25 E-value=0.0015 Score=67.83 Aligned_cols=55 Identities=22% Similarity=0.350 Sum_probs=43.1
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
-|+|++||||||..++.. -.+-..+..++++++|++|+++|||+... ++.++..+
T Consensus 2 ~kli~~DlDGTLl~~~~~-----------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~~~~l 56 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHH-----------LGEKTLSTLARLRERDITLTFATGRHVLE---MQHILGAL 56 (272)
T ss_pred ccEEEEeCCCcCcCCCCc-----------CCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHc
Confidence 379999999999986521 23557889999999999999999999874 45566543
No 34
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.24 E-value=0.0013 Score=64.77 Aligned_cols=100 Identities=23% Similarity=0.309 Sum_probs=57.9
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
.+|+.++++.++++||++..+|+-+.. ..+..|... |. .+-++ ++.+. ++-.+|| +.|+..
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~---~~~~~l~~~---gl~~~fd~-i~~s~---------~~~~~KP~~~~~~~~ 157 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPA---MLKSLVKHA---GLDDPFDA-VLSAD---------AVRAYKPAPQVYQLA 157 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHC---CChhhhhe-eEehh---------hcCCCCCCHHHHHHH
Confidence 569999999999999999999986643 334444432 11 01111 22211 1222344 334332
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCc
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGE 863 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGe 863 (912)
+ +.+. +=|. -.+. +||+..|+.+-+++|+.. .-|++.|+
T Consensus 158 ~-~~~~-~~p~---~~~~-vgD~~~Di~~A~~~G~~~---i~v~r~~~ 196 (198)
T TIGR01428 158 L-EALG-VPPD---EVLF-VASNPWDLGGAKKFGFKT---AWVNRPGE 196 (198)
T ss_pred H-HHhC-CChh---hEEE-EeCCHHHHHHHHHCCCcE---EEecCCCC
Confidence 2 2222 1122 2333 799999999999999975 35577664
No 35
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.23 E-value=0.0014 Score=64.88 Aligned_cols=126 Identities=23% Similarity=0.386 Sum_probs=71.0
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCC--CchHHHHHHHHHHHCCCeEEEEccCh-------hhhHHHHHHHHHhhhhC
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDW--TQSGVAKLFSAIKENGYQLLFLSARA-------IVQAYLTRSFLLNLKQD 780 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDW--th~GVAkLy~~I~~NGYkILYLSgRp-------igqAd~TR~wL~~~~Q~ 780 (912)
||..+|+||||.+... |.-.+.-..|| -+++|.+..+.++++||+|+.+|--. .......+..+..+.+
T Consensus 1 Kia~fD~DgTLi~~~s-~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~- 78 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS-GKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILK- 78 (159)
T ss_dssp SEEEE-SCTTTEE-ST-STTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHH-
T ss_pred CEEEEeCCCCccCCCC-CCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHH-
Confidence 6899999999997543 33334445677 46789999999999999999999532 2222223333333211
Q ss_pred CCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCC-----CCCcEEEeeCCc-----------hhhHHH
Q 002531 781 GNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPS-----DYNPFYAGFGNR-----------DTDELS 844 (912)
Q Consensus 781 G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~-----~~nPFyAGFGNR-----------~tDV~a 844 (912)
..++| +.+ +.|.+. ..-||| +..++..+...++. ..+-||+ ||+ .+|..-
T Consensus 79 ~l~ip---~~~-----~~a~~~-d~~RKP---~~GM~~~~~~~~~~~~~id~~~Sf~V--GDaagr~~~~~d~s~~D~~f 144 (159)
T PF08645_consen 79 ELGIP---IQV-----YAAPHK-DPCRKP---NPGMWEFALKDYNDGVEIDLANSFYV--GDAAGRSKKKKDFSDSDRKF 144 (159)
T ss_dssp HCTS----EEE-----EECGCS-STTSTT---SSHHHHHHCCCTSTT--S-CCC-EEE--ESSCHCTB-S--S--HHHHH
T ss_pred HcCCc---eEE-----EecCCC-CCCCCC---chhHHHHHHHhccccccccccceEEE--eccCCCCCcccccChhHHHH
Confidence 12333 332 333343 367788 56677777655542 2356776 553 566666
Q ss_pred HHhcCCC
Q 002531 845 YRKIGIP 851 (912)
Q Consensus 845 YRsVGIp 851 (912)
=..+||.
T Consensus 145 A~N~gi~ 151 (159)
T PF08645_consen 145 ALNCGIK 151 (159)
T ss_dssp HHHHT--
T ss_pred HHHcCCc
Confidence 6666764
No 36
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.20 E-value=0.0028 Score=58.43 Aligned_cols=100 Identities=20% Similarity=0.329 Sum_probs=63.5
Q ss_pred EEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceee
Q 002531 712 VISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVI 791 (912)
Q Consensus 712 VISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLL 791 (912)
|++|+||||...+. +-+|++++++.|+++|+++++||-.+-.-.....+-|+.. | |+ +
T Consensus 1 ~l~D~dGvl~~g~~------------~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~---G--i~-----~ 58 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE------------PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL---G--IP-----V 58 (101)
T ss_dssp EEEESTTTSEETTE------------E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT---T--TT------
T ss_pred CEEeCccEeEeCCC------------cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc---C--cC-----C
Confidence 68999999998432 3579999999999999999999999877766666667653 3 33 2
Q ss_pred CCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 792 SPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 792 SPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
.++.++. +...=..+|+.. .+ ...+|+ +|. .......++.|+
T Consensus 59 ~~~~i~t----------s~~~~~~~l~~~---~~--~~~v~v-lG~-~~l~~~l~~~G~ 100 (101)
T PF13344_consen 59 DEDEIIT----------SGMAAAEYLKEH---KG--GKKVYV-LGS-DGLREELREAGF 100 (101)
T ss_dssp -GGGEEE----------HHHHHHHHHHHH---TT--SSEEEE-ES--HHHHHHHHHTTE
T ss_pred CcCEEEC----------hHHHHHHHHHhc---CC--CCEEEE-EcC-HHHHHHHHHcCC
Confidence 2333332 111122244443 21 245666 887 577777787775
No 37
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.19 E-value=0.0009 Score=65.73 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=39.9
Q ss_pred EEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHH
Q 002531 712 VISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRS 772 (912)
Q Consensus 712 VISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~ 772 (912)
|++||||||..++.. ..+-..+.++.++++|++|+++|||+......+..
T Consensus 1 i~~DlDGTLl~~~~~-----------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~ 50 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLK 50 (254)
T ss_dssp EEEECCTTTCSTTSS-----------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHH
T ss_pred cEEEECCceecCCCe-----------eCHHHHHHHHhhcccceEEEEEccCcccccccccc
Confidence 789999999885311 23678899999999999999999999876544443
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.19 E-value=0.0012 Score=68.02 Aligned_cols=68 Identities=19% Similarity=0.337 Sum_probs=48.0
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP 788 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP 788 (912)
-|+|++||||||..++.. -.+...+.+++++++|++|+++|||+... ++.++..+ +...|.+|
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~~~~l---~~~~~~~~ 65 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHT-----------ISPAVKQAIAAARAKGVNVVLTTGRPYAG---VHRYLKEL---HMEQPGDY 65 (270)
T ss_pred eEEEEEecCCcCcCCCCc-----------cCHHHHHHHHHHHHCCCEEEEecCCChHH---HHHHHHHh---CCCCCCCe
Confidence 389999999999986421 13456788999999999999999999874 45556543 22223345
Q ss_pred eeeCC
Q 002531 789 VVISP 793 (912)
Q Consensus 789 vLLSP 793 (912)
+++.-
T Consensus 66 ~I~~N 70 (270)
T PRK10513 66 CITNN 70 (270)
T ss_pred EEEcC
Confidence 55443
No 39
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.19 E-value=0.0021 Score=67.03 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.|+++||++..+|+.+... ++..|+...- ..+....++.+ +. +..+|| +.|.
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~---~~~~l~~~~l--~~~~~d~i~~~-~~--------~~~~KP~p~~~~--- 165 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREM---MDVVVPLAAA--QGYRPDHVVTT-DD--------VPAGRPYPWMAL--- 165 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHHhh--cCCCceEEEcC-Cc--------CCCCCCChHHHH---
Confidence 4588899999999999999999877654 3444443211 12211223322 22 122344 4332
Q ss_pred HHHHHHhCCCC-CCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSD-YNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~-~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
..++.+ .-. ..-.+. +||+.+|+.+=+++|+++
T Consensus 166 -~a~~~l-~~~~~~e~l~-IGDs~~Di~aA~~aG~~~ 199 (267)
T PRK13478 166 -KNAIEL-GVYDVAACVK-VDDTVPGIEEGLNAGMWT 199 (267)
T ss_pred -HHHHHc-CCCCCcceEE-EcCcHHHHHHHHHCCCEE
Confidence 222222 111 112344 899999999999999965
No 40
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.19 E-value=0.00081 Score=67.56 Aligned_cols=47 Identities=19% Similarity=0.373 Sum_probs=39.2
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhH
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQA 767 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqA 767 (912)
|+|++||||||...+.. -.+...+..++++++|++|+++|||+....
T Consensus 2 k~v~~DlDGTLl~~~~~-----------i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~ 48 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRM-----------ISERAIEAIRKAEKKGIPVSLVTGNTVPFA 48 (215)
T ss_pred cEEEEecCCCcCCCCcc-----------cCHHHHHHHHHHHHCCCEEEEEcCCcchhH
Confidence 68999999999975421 346788999999999999999999987653
No 41
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.18 E-value=0.002 Score=66.25 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=53.8
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.|+++||++..+|+.+.... +..|+...- ..+..-. ++..+. +..+|| +.|.. +
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~---~~~l~~~gl--~~~f~d~-ii~~~~--------~~~~KP~p~~~~~-a 165 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMM---DVVAPEAAL--QGYRPDY-NVTTDD--------VPAGRPAPWMALK-N 165 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHH---HHHHHHHHh--cCCCCce-EEcccc--------CCCCCCCHHHHHH-H
Confidence 34888999999999999999999876544 344443311 1111111 222222 122344 43332 2
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+. +-++ .-.+. +||+.+|+.+=+++|+.+
T Consensus 166 ~~~l~-~~~~--~~~l~-IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 166 AIELG-VYDV--AACVK-VGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHcC-CCCc--hheEE-ECCcHHHHHHHHHCCCeE
Confidence 22221 1101 12334 899999999999999975
No 42
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.17 E-value=0.00093 Score=67.06 Aligned_cols=48 Identities=21% Similarity=0.288 Sum_probs=39.1
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHH
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAY 768 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd 768 (912)
|+|++||||||..++.. -.+...+.+++++++|.+|+++|||+.....
T Consensus 4 kli~~DlDGTLl~~~~~-----------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~ 51 (230)
T PRK01158 4 KAIAIDIDGTITDKDRR-----------LSLKAVEAIRKAEKLGIPVILATGNVLCFAR 51 (230)
T ss_pred eEEEEecCCCcCCCCCc-----------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHH
Confidence 89999999999986421 1245778889999999999999999977544
No 43
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.17 E-value=0.001 Score=77.53 Aligned_cols=124 Identities=18% Similarity=0.305 Sum_probs=76.4
Q ss_pred CCCeEEEEecCCCcccccccCccCCCCCCCCC--chHHHHHHHHHHHCCCeEEEEccChhh---------hHHHHHHHHH
Q 002531 707 WNAKIVISDVDGTITKSDVLGQFMPLVGKDWT--QSGVAKLFSAIKENGYQLLFLSARAIV---------QAYLTRSFLL 775 (912)
Q Consensus 707 ~~~KVVISDIDGTITkSDvlGhilP~lGKDWt--h~GVAkLy~~I~~NGYkILYLSgRpig---------qAd~TR~wL~ 775 (912)
...||+.||.||||.... -|...|.-..||. .+||.++++.|+++||+|+.+|.-+.. ....+...|.
T Consensus 166 ~~~Kia~fD~DGTLi~t~-sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~ 244 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTK-SGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVA 244 (526)
T ss_pred ccCcEEEEECCCCccccC-CCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHH
Confidence 457999999999999642 2444565556774 899999999999999999999986551 2223444454
Q ss_pred hhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCC-----CCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 776 NLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFP-----SDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 776 ~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP-----~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
. .++|-- +++.++ ....|||. ..++..+...++ .....|| +||+..|+.+-+.+|-
T Consensus 245 ~-----lgipfd-viia~~--------~~~~RKP~---pGm~~~a~~~~~~~~~Id~~~S~~--VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 245 K-----LGVPFQ-VFIAIG--------AGFYRKPL---TGMWDHLKEEANDGTEIQEDDCFF--VGDAAGRPANGKAAGK 305 (526)
T ss_pred H-----cCCceE-EEEeCC--------CCCCCCCC---HHHHHHHHHhcCcccCCCHHHeEE--eCCcccchHHHHhcCC
Confidence 3 245422 222222 23456773 334444443332 1113445 5898888877555543
No 44
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.15 E-value=0.0047 Score=69.00 Aligned_cols=137 Identities=20% Similarity=0.264 Sum_probs=76.6
Q ss_pred CeEEEEecCCCcccccccCccCCC-CCCCCCchHHHHHHHHHHHCCCeEEEEccC-hhh-------h----HHHHHHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPL-VGKDWTQSGVAKLFSAIKENGYQLLFLSAR-AIV-------Q----AYLTRSFLL 775 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~-lGKDWth~GVAkLy~~I~~NGYkILYLSgR-pig-------q----Ad~TR~wL~ 775 (912)
.|++.+|.||||+..-. ++.... +.+--..+||.+++..++++||++..+|.. .++ . ...+..-|.
T Consensus 2 ~k~l~lDrDgtl~~~~~-~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 2 QKILFIDRDGTLIEEPP-TDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CcEEEEeCCCCccCCCC-ccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 58999999999998532 121111 222225789999999999999999999984 111 1 122333333
Q ss_pred hhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcE
Q 002531 776 NLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKI 855 (912)
Q Consensus 776 ~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RI 855 (912)
. .+++-.-+++.++.. -.+.-.+||+ .+++..+.....-+....+. +||+.+|+.+=+.+|+..
T Consensus 81 ~-----~gl~fd~i~i~~~~~----sd~~~~rKP~---p~~l~~a~~~l~v~~~~svm-IGDs~sDi~aAk~aGi~~--- 144 (354)
T PRK05446 81 S-----QGIKFDEVLICPHFP----EDNCSCRKPK---TGLVEEYLAEGAIDLANSYV-IGDRETDVQLAENMGIKG--- 144 (354)
T ss_pred H-----cCCceeeEEEeCCcC----cccCCCCCCC---HHHHHHHHHHcCCCcccEEE-EcCCHHHHHHHHHCCCeE---
Confidence 2 234322233332110 0111234563 23333332222212223344 699999999999999974
Q ss_pred EEECCCC
Q 002531 856 FIINPKG 862 (912)
Q Consensus 856 FiInpkG 862 (912)
+.||+.+
T Consensus 145 I~v~~~~ 151 (354)
T PRK05446 145 IRYARET 151 (354)
T ss_pred EEEECCC
Confidence 3456643
No 45
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.13 E-value=0.0017 Score=66.44 Aligned_cols=95 Identities=21% Similarity=0.253 Sum_probs=53.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC-ceeeCCCCCCchhhhhhcccCcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG-PVVISPDGLFPSLFREVIRRAPHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G-PvLLSPd~Lf~ALrREvi~RkPe~FKie~L 817 (912)
.+|+.++...|+++|+++..+|+.+.... +..|..+ ++..- .+++..+ .+..+||+. +++
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~---~~~l~~~-----~l~~~f~~i~~~~--------~~~~~KP~p---~~~ 157 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLA---RLILPQL-----GWEQRCAVLIGGD--------TLAERKPHP---LPL 157 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHHc-----CchhcccEEEecC--------cCCCCCCCH---HHH
Confidence 45888999999999999999999876433 3344432 11110 1111111 112234432 222
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
..+...+.-...-.+. +||+.+|+.+-+++|+.+-
T Consensus 158 ~~~~~~l~~~p~~~l~-IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 158 LVAAERIGVAPTDCVY-VGDDERDILAARAAGMPSV 192 (229)
T ss_pred HHHHHHhCCChhhEEE-eCCCHHHHHHHHHCCCcEE
Confidence 2222222111122444 8999999999999999753
No 46
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.13 E-value=0.004 Score=59.11 Aligned_cols=58 Identities=21% Similarity=0.300 Sum_probs=42.3
Q ss_pred eEEEEecCCCccccccc-CccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccC-hhhhH
Q 002531 710 KIVISDVDGTITKSDVL-GQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSAR-AIVQA 767 (912)
Q Consensus 710 KVVISDIDGTITkSDvl-GhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgR-pigqA 767 (912)
|++++|+||||+..... -+-.+.+..+-..+|+.++++.++++|+++..+|++ +...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~ 60 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVA 60 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence 68999999999975310 011122333345789999999999999999999998 55443
No 47
>PLN02645 phosphoglycolate phosphatase
Probab=97.12 E-value=0.0022 Score=69.17 Aligned_cols=107 Identities=23% Similarity=0.359 Sum_probs=68.8
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP 788 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP 788 (912)
-++|+|||||||-..+. .-+|+.++++.++++|++|+++|+|+........+-|+.+ | |+
T Consensus 28 ~~~~~~D~DGtl~~~~~------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l---G--i~--- 87 (311)
T PLN02645 28 VETFIFDCDGVIWKGDK------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL---G--LN--- 87 (311)
T ss_pred CCEEEEeCcCCeEeCCc------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC---C--CC---
Confidence 48999999999998531 2478999999999999999999999966555544444432 2 21
Q ss_pred eeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 789 VVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 789 vLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+.++.++. +......+|+.+. ++.+ ..+|+ .|. ..+....+..|+.+
T Consensus 88 --~~~~~I~t----------s~~~~~~~l~~~~--~~~~-~~V~v-iG~-~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 88 --VTEEEIFS----------SSFAAAAYLKSIN--FPKD-KKVYV-IGE-EGILEELELAGFQY 134 (311)
T ss_pred --CChhhEee----------hHHHHHHHHHhhc--cCCC-CEEEE-EcC-HHHHHHHHHCCCEE
Confidence 22333332 1122333454332 2222 23555 565 67888999999864
No 48
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.11 E-value=0.0029 Score=59.76 Aligned_cols=89 Identities=18% Similarity=0.128 Sum_probs=52.7
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 818 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~ 818 (912)
-+|+.+++..|+++|+++..+|++.........+.+ +. .+.. .+.++.+ .- +||. -+.+.
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~----~~f~-~i~~~~~---------~~-~Kp~---~~~~~ 125 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LG----DYFD-LILGSDE---------FG-AKPE---PEIFL 125 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HH----hcCc-EEEecCC---------CC-CCcC---HHHHH
Confidence 369999999999999999999999877766554442 11 1111 1233221 11 3443 12222
Q ss_pred HHHHhCCCCCCcEEEeeCCchhhHHHHHhcC
Q 002531 819 DIKKLFPSDYNPFYAGFGNRDTDELSYRKIG 849 (912)
Q Consensus 819 dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVG 849 (912)
.+...+.-.. ..+. +||+..|+.+=+++|
T Consensus 126 ~~~~~~~~~~-~~l~-iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLPP-EVLH-VGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCCC-CEEE-EeCCHHHHHHHHHcc
Confidence 2222222222 2333 799999999988876
No 49
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.10 E-value=0.0018 Score=66.53 Aligned_cols=103 Identities=13% Similarity=0.127 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCC-CCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDG-NALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G-~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
.+|+.+++..|+++||++..+|+-+... .+..|... | ..+-+. ++.+. ++-.+|| +.|...
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~---~~~~l~~~---~l~~~fd~-iv~s~---------~~~~~KP~p~~~~~~ 158 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHN---LAVKLEHT---GLDAHLDL-LLSTH---------TFGYPKEDQRLWQAV 158 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHH---HHHHHHHC---CcHHHCCE-EEEee---------eCCCCCCCHHHHHHH
Confidence 4699999999999999999999854332 22223321 0 000111 22211 1122344 434332
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCce
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEV 864 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel 864 (912)
+ +.+. + ++ ...+. +||+..|+.+=+++|+... |.+-++.+..
T Consensus 159 ~-~~~~-~-~p--~~~l~-igDs~~di~aA~~aG~~~~-~~v~~~~~~~ 200 (224)
T PRK14988 159 A-EHTG-L-KA--ERTLF-IDDSEPILDAAAQFGIRYC-LGVTNPDSGI 200 (224)
T ss_pred H-HHcC-C-Ch--HHEEE-EcCCHHHHHHHHHcCCeEE-EEEeCCCCCc
Confidence 2 2221 1 11 22444 8999999999999999741 1223455443
No 50
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.08 E-value=0.0021 Score=63.40 Aligned_cols=95 Identities=19% Similarity=0.286 Sum_probs=57.9
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC---CceeeCCCCCCchhhhhhcccCcHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN---GPVVISPDGLFPSLFREVIRRAPHEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~---GPvLLSPd~Lf~ALrREvi~RkPe~FKie 815 (912)
.+|+.+++..++++ |++..+|+...... +.+|..+ +++. -.+....+..+.. .. ..+|+ -|..
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~---~~~l~~~-----gl~~~f~~~~~~~~~~~i~~--~~--~~~p~-~k~~ 135 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFA---GPLMRQL-----GWPTLFCHSLEVDEDGMITG--YD--LRQPD-GKRQ 135 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHH---HHHHHHc-----CCchhhcceEEECCCCeEEC--cc--ccccc-hHHH
Confidence 47999999999999 99999999877544 4555543 2221 1122222221110 01 11232 3667
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+++.+... + ...++ +||+.+|+.+.+++|+..
T Consensus 136 ~l~~~~~~-~---~~~v~-iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 136 AVKALKSL-G---YRVIA-AGDSYNDTTMLGEADAGI 167 (205)
T ss_pred HHHHHHHh-C---CeEEE-EeCCHHHHHHHHhCCCCE
Confidence 77766642 1 23344 899999999999999743
No 51
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.06 E-value=0.00096 Score=73.15 Aligned_cols=125 Identities=15% Similarity=0.176 Sum_probs=70.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC---ceeeCCCCCCchhhhhhcccCcHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG---PVVISPDGLFPSLFREVIRRAPHEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G---PvLLSPd~Lf~ALrREvi~RkPe~FKie 815 (912)
.+|+.++++.++++||++..+|+-.....+...+-| ++..- .+.+....+...+..+...++ -|.+
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L--------gld~~~an~lei~dg~ltg~v~g~iv~~k---~K~~ 251 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL--------RLDAAVANELEIMDGKLTGNVLGDIVDAQ---YKAD 251 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc--------CCCeEEEeEEEEECCEEEeEecCccCCcc---cHHH
Confidence 568999999999999999999998775544333222 22110 011111111010001111222 2777
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeecccccccchhhhhc
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDVKSYTSLHT 880 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~~~~~~kSY~~L~e 880 (912)
+|+.+...+.-.....++ |||..+|+.|.+.+|+.. ..|++=.|+ ..+.....+..|..
T Consensus 252 ~L~~la~~lgi~~~qtIa-VGDg~NDl~m~~~AGlgi----A~nAkp~Vk-~~Ad~~i~~~~l~~ 310 (322)
T PRK11133 252 TLTRLAQEYEIPLAQTVA-IGDGANDLPMIKAAGLGI----AYHAKPKVN-EQAQVTIRHADLMG 310 (322)
T ss_pred HHHHHHHHcCCChhhEEE-EECCHHHHHHHHHCCCeE----EeCCCHHHH-hhCCEEecCcCHHH
Confidence 888777655322233455 999999999999999854 348775553 23222224544443
No 52
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.05 E-value=0.0042 Score=61.49 Aligned_cols=115 Identities=20% Similarity=0.256 Sum_probs=71.3
Q ss_pred CCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC
Q 002531 707 WNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN 786 (912)
Q Consensus 707 ~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~ 786 (912)
.+-++|++|+||||+..+. .-..+|+.++++.++++|+++..+|+.+. ...++.+++.. ++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~~-----gl~- 84 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------NEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKAL-----GIP- 84 (170)
T ss_pred CCCCEEEEecCCccccCCC----------CCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHHc-----CCE-
Confidence 5679999999999997431 12467999999999999999999999873 22334444322 111
Q ss_pred CceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCch-hhHHHHHhcCCCCCcEEEECCC
Q 002531 787 GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRD-TDELSYRKIGIPKGKIFIINPK 861 (912)
Q Consensus 787 GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~-tDV~aYRsVGIp~~RIFiInpk 861 (912)
.+ + + ....+|+.|+.. ++.+. -...-.+. +||+. +|+.+=+++|+.. ..|++.
T Consensus 85 ---~~-----~---~--~~KP~p~~~~~~-l~~~~----~~~~~~l~-IGDs~~~Di~aA~~aGi~~---i~v~~g 138 (170)
T TIGR01668 85 ---VL-----P---H--AVKPPGCAFRRA-HPEMG----LTSEQVAV-VGDRLFTDVMGGNRNGSYT---ILVEPL 138 (170)
T ss_pred ---EE-----c---C--CCCCChHHHHHH-HHHcC----CCHHHEEE-ECCcchHHHHHHHHcCCeE---EEEccC
Confidence 11 0 0 012344444432 22221 11122444 89998 8999999999964 344553
No 53
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.04 E-value=0.0027 Score=60.79 Aligned_cols=99 Identities=16% Similarity=0.201 Sum_probs=56.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC--C-ceeeCCCCCCch-hhhhhcccCcHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN--G-PVVISPDGLFPS-LFREVIRRAPHEFKI 814 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~--G-PvLLSPd~Lf~A-LrREvi~RkPe~FKi 814 (912)
.+|+.++++.++++|+++..+|+.... .++.++..+ +++. + .+....++.+.. .+.. ......-|.
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~---~i~~~~~~~-----g~~~~~~~~~~~~~~g~~~g~~~~~--~~~~~~~K~ 144 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDF---FVEPVAEKL-----GIDDVFANRLEFDDNGLLTGPIEGQ--VNPEGECKG 144 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHHc-----CCchheeeeEEECCCCEEeCccCCc--ccCCcchHH
Confidence 468999999999999999999997654 455555543 1210 0 111111111110 0000 011123488
Q ss_pred HHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc
Q 002531 815 ACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI 848 (912)
Q Consensus 815 e~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV 848 (912)
+.++.+...........++ |||..+|+.|.+.+
T Consensus 145 ~~l~~~~~~~~~~~~~~~~-iGDs~~D~~~~~~a 177 (177)
T TIGR01488 145 KVLKELLEESKITLKKIIA-VGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHhCCCHHHEEE-EeCCHHHHHHHhcC
Confidence 8888776543222233455 99999999998753
No 54
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.03 E-value=0.0017 Score=68.74 Aligned_cols=94 Identities=16% Similarity=0.237 Sum_probs=53.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCC-CCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDG-NALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G-~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L 817 (912)
.+|+.+++..|++.||++..+|+.+..... ..|..+ | ..+-.. ++.+ +... .-..+|+.|... +
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~---~~l~~~---gl~~~Fd~-ii~~-~d~~------~~KP~Pe~~~~a-~ 175 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYLE---RAIEAV---GMEGFFSV-VLAA-EDVY------RGKPDPEMFMYA-A 175 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHHH---HHHHHc---CCHhhCcE-EEec-ccCC------CCCCCHHHHHHH-H
Confidence 357888889999999999999998764443 333322 1 011111 1221 1110 012234445433 2
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+.+. +-| .-.+. +||+.+|+.+-+++|+.+
T Consensus 176 ~~l~-~~p---~~~l~-IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 176 ERLG-FIP---ERCIV-FGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred HHhC-CCh---HHeEE-EcCCHHHHHHHHHcCCEE
Confidence 2222 111 12344 899999999999999974
No 55
>PRK08238 hypothetical protein; Validated
Probab=96.98 E-value=0.0018 Score=74.62 Aligned_cols=129 Identities=23% Similarity=0.256 Sum_probs=82.1
Q ss_pred CCeEEEEecCCCcccccccCc-------cCCC-----------------------CCCCC----CchHHHHHHHHHHHCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQ-------FMPL-----------------------VGKDW----TQSGVAKLFSAIKENG 753 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGh-------ilP~-----------------------lGKDW----th~GVAkLy~~I~~NG 753 (912)
.....|+|+||||+++|.+-- ..|. ++-|- -++|+.++.+.++++|
T Consensus 9 ~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~G 88 (479)
T PRK08238 9 RDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAAG 88 (479)
T ss_pred CCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHCC
Confidence 345799999999999997610 0110 12222 2579999999999999
Q ss_pred CeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEE
Q 002531 754 YQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYA 833 (912)
Q Consensus 754 YkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyA 833 (912)
+++..+|+++...++...+.+ ++ .-.++.+.+ +...+++. |.+.+. +.++.+ .+..
T Consensus 89 ~~v~LaTas~~~~a~~i~~~l--------Gl-Fd~Vigsd~---------~~~~kg~~-K~~~l~---~~l~~~--~~~y 144 (479)
T PRK08238 89 RKLVLATASDERLAQAVAAHL--------GL-FDGVFASDG---------TTNLKGAA-KAAALV---EAFGER--GFDY 144 (479)
T ss_pred CEEEEEeCCCHHHHHHHHHHc--------CC-CCEEEeCCC---------ccccCCch-HHHHHH---HHhCcc--CeeE
Confidence 999999999887766554433 11 111222221 12233332 555444 333332 2333
Q ss_pred eeCCchhhHHHHHhcCCCCCcEEEECCCCcee
Q 002531 834 GFGNRDTDELSYRKIGIPKGKIFIINPKGEVA 865 (912)
Q Consensus 834 GFGNR~tDV~aYRsVGIp~~RIFiInpkGel~ 865 (912)
+||+.+|+.+++.+| +-+.||+...+.
T Consensus 145 -vGDS~~Dlp~~~~A~----~av~Vn~~~~l~ 171 (479)
T PRK08238 145 -AGNSAADLPVWAAAR----RAIVVGASPGVA 171 (479)
T ss_pred -ecCCHHHHHHHHhCC----CeEEECCCHHHH
Confidence 599999999999999 446899986543
No 56
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.97 E-value=0.0028 Score=60.95 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC-------CceeeCCCCCCchhhhh--hcccC-c
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN-------GPVVISPDGLFPSLFRE--VIRRA-P 809 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~-------GPvLLSPd~Lf~ALrRE--vi~Rk-P 809 (912)
+|+.++++.++++||++.++|+....... .+|..+ +++. .+.....++++.....+ +.... .
T Consensus 75 ~g~~~ll~~l~~~g~~~~i~S~~~~~~~~---~~l~~~-----~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 75 PGFKEFIAFIKEHGIDFIVISDGNDFFID---PVLEGI-----GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCcHHHHH---HHHHHc-----CChhheeEEeccCceECCCCcEEEecCCCCccCcCCC
Confidence 37778888999999999999997654333 333321 1110 11111111211111000 00000 1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 810 HEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 810 e~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
...|.+.++.++..+| ...++ +||+.+|+.+-+++++-
T Consensus 147 g~~K~~~~~~~~~~~~---~~~i~-iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKY---QHIIY-IGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCCHHHHHHHHHhhcC---ceEEE-ECCCcchhchHhcCCcc
Confidence 1237777777775432 23444 79999999998887654
No 57
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.93 E-value=0.0041 Score=62.22 Aligned_cols=96 Identities=18% Similarity=0.114 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHH
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLED 819 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~d 819 (912)
+|+.+++..+++.||++..+|+..........+-+... .+..|+ .++.+.+ .. + ...+|+.|... ++.
T Consensus 90 ~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~--~~~~f~--~i~~~~~-~~----~--~KP~p~~~~~a-~~~ 157 (220)
T TIGR03351 90 PGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT--VGDDVD--AVVCPSD-VA----A--GRPAPDLILRA-MEL 157 (220)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh--hhccCC--EEEcCCc-CC----C--CCCCHHHHHHH-HHH
Confidence 47888999999999999999998765444433322110 001222 2333322 11 0 12344444432 222
Q ss_pred HHHhCCCC-CCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 820 IKKLFPSD-YNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 820 Ir~LFP~~-~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+... ....+. +||+.+|+.+=+++|++.
T Consensus 158 ----~~~~~~~~~~~-igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 158 ----TGVQDVQSVAV-AGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ----cCCCChhHeEE-eCCCHHHHHHHHHCCCCe
Confidence 2111 123444 899999999999999995
No 58
>PLN02940 riboflavin kinase
Probab=96.93 E-value=0.0021 Score=71.55 Aligned_cols=94 Identities=13% Similarity=0.191 Sum_probs=52.5
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.|+++|+++..+|+.+... ++..|.++..-...| .. ++..+ ++..+|| +.|...
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~F--d~-ii~~d--------~v~~~KP~p~~~~~a- 159 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRAN---IEAKISCHQGWKESF--SV-IVGGD--------EVEKGKPSPDIFLEA- 159 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHhccChHhhC--CE-EEehh--------hcCCCCCCHHHHHHH-
Confidence 4688899999999999999999986443 333333110000011 11 22221 1223455 333322
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+. + ++ .-.+. +||+..|+.+-+++|+.+
T Consensus 160 ~~~lg-v-~p--~~~l~-VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 160 AKRLN-V-EP--SNCLV-IEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred HHHcC-C-Ch--hHEEE-EeCCHHHHHHHHHcCCEE
Confidence 22221 1 11 12344 899999999999999974
No 59
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.92 E-value=0.0035 Score=61.94 Aligned_cols=91 Identities=24% Similarity=0.194 Sum_probs=52.0
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCcH--HHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie 815 (912)
.+|+.++++.|+++||++..+|+-+.. .+..|... |- .+- -.++.+.+ +-.+||+ .|..
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~l~~~---~l~~~f-d~i~~s~~---------~~~~KP~~~~~~~- 168 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR----LRGLLEAL---GLLEYF-DFVVTSYE---------VGAEKPDPKIFQE- 168 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh----HHHHHHHC---CcHHhc-ceEEeecc---------cCCCCCCHHHHHH-
Confidence 568889999999999999999986542 23445432 11 111 12222221 1223443 3333
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCch-hhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRD-TDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~-tDV~aYRsVGIp~ 852 (912)
+++.+ .-...-.+. +||+. +|+.+-+++|+.+
T Consensus 169 ~~~~~----~~~~~~~~~-IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 169 ALERA----GISPEEALH-IGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred HHHHc----CCChhHEEE-ECCCchHHHHHHHHcCCee
Confidence 22222 111123444 89997 8999999999864
No 60
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.92 E-value=0.0016 Score=64.97 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=37.4
Q ss_pred EEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHH
Q 002531 712 VISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYL 769 (912)
Q Consensus 712 VISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~ 769 (912)
|++||||||..++.. ..+...+..++++++|++|+++|||+......
T Consensus 1 i~~DlDGTLl~~~~~-----------i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~ 47 (225)
T TIGR01482 1 IASDIDGTLTDPNRA-----------INESALEAIRKAESVGIPVVLVTGNSVQFARA 47 (225)
T ss_pred CeEeccCccCCCCcc-----------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHH
Confidence 689999999986521 23446778899999999999999999876544
No 61
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.90 E-value=0.002 Score=66.51 Aligned_cols=53 Identities=17% Similarity=0.341 Sum_probs=43.0
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRS 772 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~ 772 (912)
.|+|++||||||+.++.. -++-..+..++++++|++|+++|||+.........
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~ 55 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------ISPETKEALARLREKGVKVVLATGRPLPDVLSILE 55 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHH
Confidence 589999999999997533 35678889999999999999999999954444333
No 62
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.89 E-value=0.0021 Score=64.80 Aligned_cols=94 Identities=13% Similarity=0.167 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHH
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLED 819 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~d 819 (912)
+|+.++...++++||++..+|+.... .++..|+... -..+.. .++.+. ... .-.++|+.|.. +++.
T Consensus 95 ~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~~--l~~~f~-~~~~~~-~~~------~~Kp~~~~~~~-~~~~ 160 (222)
T PRK10826 95 PGVREALALCKAQGLKIGLASASPLH---MLEAVLTMFD--LRDYFD-ALASAE-KLP------YSKPHPEVYLN-CAAK 160 (222)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHhCc--chhccc-EEEEcc-cCC------CCCCCHHHHHH-HHHH
Confidence 47888899999999999999996543 3444444320 001111 122221 110 11233443433 2222
Q ss_pred HHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 820 IKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 820 Ir~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+ ++ ...-.+. +||+.+|+.+-+++|++.
T Consensus 161 ~-~~---~~~~~~~-igDs~~Di~aA~~aG~~~ 188 (222)
T PRK10826 161 L-GV---DPLTCVA-LEDSFNGMIAAKAARMRS 188 (222)
T ss_pred c-CC---CHHHeEE-EcCChhhHHHHHHcCCEE
Confidence 2 11 1122444 899999999999999965
No 63
>PRK06769 hypothetical protein; Validated
Probab=96.87 E-value=0.0058 Score=60.68 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=68.6
Q ss_pred CeEEEEecCCCcccccccCccCCCCC-CCC-CchHHHHHHHHHHHCCCeEEEEccChhhhHH--HHHHHHHhhhhCCCCC
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVG-KDW-TQSGVAKLFSAIKENGYQLLFLSARAIVQAY--LTRSFLLNLKQDGNAL 784 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lG-KDW-th~GVAkLy~~I~~NGYkILYLSgRpigqAd--~TR~wL~~~~Q~G~~L 784 (912)
=|++++|.||||-. |.. +.. .++ ..+||.+++..|+++||++..+|..+..++. ..+.++..+. ..+|
T Consensus 4 ~~~~~~d~d~~~~~-----~~~-~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~--~~g~ 75 (173)
T PRK06769 4 IQAIFIDRDGTIGG-----DTT-IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELK--GFGF 75 (173)
T ss_pred CcEEEEeCCCcccC-----CCC-CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHH--hCCc
Confidence 47999999999942 322 121 123 4689999999999999999999987532210 0111222111 1122
Q ss_pred CCCceeeCCCCCCchhhhhhcccCc--HHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 785 PNGPVVISPDGLFPSLFREVIRRAP--HEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 785 P~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
. .++++.... ..++-.+|| +.|+.. ++++. ....-.+. +||+.+|+.+-+++|+..-
T Consensus 76 ~--~~~~~~~~~----~~~~~~~KP~p~~~~~~-~~~l~----~~p~~~i~-IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 76 D--DIYLCPHKH----GDGCECRKPSTGMLLQA-AEKHG----LDLTQCAV-IGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred C--EEEECcCCC----CCCCCCCCCCHHHHHHH-HHHcC----CCHHHeEE-EcCCHHHHHHHHHCCCeEE
Confidence 2 122221100 111122344 444432 22222 11112344 7899999999999999754
No 64
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.86 E-value=0.002 Score=70.72 Aligned_cols=52 Identities=17% Similarity=0.314 Sum_probs=40.8
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHH
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRS 772 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~ 772 (912)
|+|++||||||..++.- .| .-+.+..++++++|.+|+.+|||+..-....++
T Consensus 2 KLIftDLDGTLLd~~~~---------~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~ 53 (302)
T PRK12702 2 RLVLSSLDGSLLDLEFN---------SY--GAARQALAALERRSIPLVLYSLRTRAQLEHLCR 53 (302)
T ss_pred cEEEEeCCCCCcCCCCc---------CC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 78999999999985421 22 347889999999999999999998765444443
No 65
>PRK10444 UMP phosphatase; Provisional
Probab=96.86 E-value=0.0019 Score=68.04 Aligned_cols=66 Identities=23% Similarity=0.369 Sum_probs=50.7
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCce
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPV 789 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPv 789 (912)
+.|+||+||||..++. ..+|+.+.++.|+++|.+|+++|+|+-.-.....+-|..+ |..++..-+
T Consensus 2 ~~v~~DlDGtL~~~~~------------~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~---G~~~~~~~i 66 (248)
T PRK10444 2 KNVICDIDGVLMHDNV------------AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATA---GVDVPDSVF 66 (248)
T ss_pred cEEEEeCCCceEeCCe------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCCHhhE
Confidence 5799999999998642 2578999999999999999999999976666655555543 544455444
Q ss_pred e
Q 002531 790 V 790 (912)
Q Consensus 790 L 790 (912)
+
T Consensus 67 ~ 67 (248)
T PRK10444 67 Y 67 (248)
T ss_pred e
Confidence 4
No 66
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.86 E-value=0.0009 Score=66.86 Aligned_cols=39 Identities=18% Similarity=0.345 Sum_probs=34.2
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhh----hHHHHHHHHHhh
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIV----QAYLTRSFLLNL 777 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpig----qAd~TR~wL~~~ 777 (912)
.+|+.+++++|.+.|+.++|+|+|+.. ++..|++||.+|
T Consensus 75 ~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 75 IPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp -TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHH
Confidence 459999999999999999999999987 688999999986
No 67
>PF15017 AF1Q: Drug resistance and apoptosis regulator
Probab=96.84 E-value=0.00057 Score=63.08 Aligned_cols=30 Identities=43% Similarity=0.860 Sum_probs=22.3
Q ss_pred cccCCCCC-CCCCCCCCcccccCCCCCCCCC
Q 002531 883 NDMFPPTS-LVEQEDYNSWNFWRIPLPEIEI 912 (912)
Q Consensus 883 d~~FPp~~-~~~~~~fs~f~yWr~plp~idl 912 (912)
+..+++.. ..+..+||+|+|||.|||+||+
T Consensus 5 ~~~~~~~~~~~~~~~f~sF~fWR~PlP~id~ 35 (87)
T PF15017_consen 5 DWDKPPPQHDPEDEEFNSFLFWRNPLPDIDL 35 (87)
T ss_pred cccCCCccCCcccccccceeeccCCCCCCCH
Confidence 34455544 3456789999999999999974
No 68
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.84 E-value=0.0029 Score=66.29 Aligned_cols=69 Identities=16% Similarity=0.319 Sum_probs=48.1
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG 787 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G 787 (912)
..++|++||||||..++.. ..+-..+..++++++|.+|+.+|||+... .+.++..+ +++.+
T Consensus 6 ~~~lI~~DlDGTLL~~~~~-----------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~---i~~~~~~l-----~~~~~ 66 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHTY-----------DWQPAAPWLTRLREAQVPVILCSSKTAAE---MLPLQQTL-----GLQGL 66 (271)
T ss_pred CCeEEEEeCccCCcCCCCc-----------CcHHHHHHHHHHHHcCCeEEEEcCCCHHH---HHHHHHHh-----CCCCC
Confidence 4689999999999985321 12346678899999999999999999865 44555543 24334
Q ss_pred ceeeCCCC
Q 002531 788 PVVISPDG 795 (912)
Q Consensus 788 PvLLSPd~ 795 (912)
|++..-..
T Consensus 67 ~~I~~NGa 74 (271)
T PRK03669 67 PLIAENGA 74 (271)
T ss_pred cEEEeCCC
Confidence 55554333
No 69
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=96.82 E-value=0.0023 Score=64.32 Aligned_cols=112 Identities=16% Similarity=0.259 Sum_probs=63.9
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHH--HHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVA--KLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN 786 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVA--kLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~ 786 (912)
-|++||||||++|..... ..--|.-+....+. --.+.|++.||++..+|+.+... ++..|..+ ++.
T Consensus 7 i~~~v~d~dGv~tdg~~~---~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~---~~~~l~~l-----gi~- 74 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIV---INDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGA---VRHRAEEL-----KIK- 74 (169)
T ss_pred CeEEEEeCceeeECCeEE---EcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHH---HHHHHHHC-----CCc-
Confidence 689999999999984211 11133333322111 12355668899999999987654 44455543 111
Q ss_pred CceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 787 GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 787 GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.+|.. ...+|+.|+. ++..+. -.....++ |||..+|+.+.+.+|+.
T Consensus 75 --------~~f~~-----~kpkp~~~~~-~~~~l~----~~~~ev~~-iGD~~nDi~~~~~ag~~ 120 (169)
T TIGR02726 75 --------RFHEG-----IKKKTEPYAQ-MLEEMN----ISDAEVCY-VGDDLVDLSMMKRVGLA 120 (169)
T ss_pred --------EEEec-----CCCCHHHHHH-HHHHcC----cCHHHEEE-ECCCHHHHHHHHHCCCe
Confidence 12221 2344543332 222221 11123444 99999999999999876
No 70
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.77 E-value=0.002 Score=67.70 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=45.4
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCC-CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDW-TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDW-th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
|+|+|||||||..++. +.+ ..+|+.+.+++|+++|++|+++|+|+..-.......|..
T Consensus 2 k~i~~D~DGtl~~~~~---------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~ 60 (257)
T TIGR01458 2 KGVLLDISGVLYISDA---------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR 60 (257)
T ss_pred CEEEEeCCCeEEeCCC---------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 6899999999998642 112 457899999999999999999999877665555555543
No 71
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.75 E-value=0.0031 Score=64.78 Aligned_cols=69 Identities=20% Similarity=0.405 Sum_probs=48.6
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP 788 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP 788 (912)
-|+|++||||||..++.. -.+...+..++++++|++|+.+|||+... ++.++..+ .+ .+|
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~~~~l-----~~-~~~ 62 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKT-----------ILPESLEALARAREAGYKVIIVTGRHHVA---IHPFYQAL-----AL-DTP 62 (272)
T ss_pred ccEEEEeCCCceECCCCc-----------cCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHhc-----CC-CCC
Confidence 379999999999986421 13446788999999999999999999754 45566543 22 356
Q ss_pred eeeCCCCCC
Q 002531 789 VVISPDGLF 797 (912)
Q Consensus 789 vLLSPd~Lf 797 (912)
+++.-..+.
T Consensus 63 ~I~~NGa~i 71 (272)
T PRK10530 63 AICCNGTYL 71 (272)
T ss_pred EEEcCCcEE
Confidence 655444433
No 72
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.75 E-value=0.018 Score=59.36 Aligned_cols=132 Identities=25% Similarity=0.348 Sum_probs=87.0
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCC--CC-CchHHHHHHHHHHHCCCeEEEEccC--------hhhhHHHHHHHHHh
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGK--DW-TQSGVAKLFSAIKENGYQLLFLSAR--------AIVQAYLTRSFLLN 776 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGK--DW-th~GVAkLy~~I~~NGYkILYLSgR--------pigqAd~TR~wL~~ 776 (912)
+.|+|..|-||||-+-. +. |+.+ +| -.+|+.+...++.+.||+++.+|-- +...-....+|+.+
T Consensus 4 ~~k~lflDRDGtin~d~--~~---yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~ 78 (181)
T COG0241 4 DQKALFLDRDGTINIDK--GD---YVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLK 78 (181)
T ss_pred CCcEEEEcCCCceecCC--Cc---ccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHH
Confidence 47899999999999742 11 4333 33 5889999999999999999999972 22233333333333
Q ss_pred -hhhCCCCCCCCceeeCCCCCCchhhhh--hcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 777 -LKQDGNALPNGPVVISPDGLFPSLFRE--VIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 777 -~~Q~G~~LP~GPvLLSPd~Lf~ALrRE--vi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
+.+.|..|. +-+.+ |. +++ -.-||| |..++..+.+-|.-+....|. .|||.+|+.+=.++|+.+-
T Consensus 79 ~l~~~gv~id-~i~~C-ph------~p~~~c~cRKP---~~gm~~~~~~~~~iD~~~s~~-VGD~~~Dlq~a~n~gi~~~ 146 (181)
T COG0241 79 ILASQGVKID-GILYC-PH------HPEDNCDCRKP---KPGMLLSALKEYNIDLSRSYV-VGDRLTDLQAAENAGIKGV 146 (181)
T ss_pred HHHHcCCccc-eEEEC-CC------CCCCCCcccCC---ChHHHHHHHHHhCCCccceEE-ecCcHHHHHHHHHCCCCce
Confidence 345554442 32333 32 222 367888 667666666555545556666 8999999999999999954
Q ss_pred cEE
Q 002531 854 KIF 856 (912)
Q Consensus 854 RIF 856 (912)
++.
T Consensus 147 ~~~ 149 (181)
T COG0241 147 LVL 149 (181)
T ss_pred EEE
Confidence 443
No 73
>PTZ00174 phosphomannomutase; Provisional
Probab=96.73 E-value=0.0035 Score=65.21 Aligned_cols=53 Identities=21% Similarity=0.342 Sum_probs=41.6
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~ 775 (912)
-|+|++||||||..++.. + .+...+..++++++|++|+++|||+... ++..|.
T Consensus 5 ~klia~DlDGTLL~~~~~--i---------s~~~~~ai~~l~~~Gi~~viaTGR~~~~---i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRNP--I---------TQEMKDTLAKLKSKGFKIGVVGGSDYPK---IKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCCC--C---------CHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHh
Confidence 589999999999987632 2 2346788999999999999999998763 345453
No 74
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.69 E-value=0.0052 Score=65.70 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcH--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie~ 816 (912)
.+|+.+++..++++||++..+|+.+..... ..|... .+..+..+--.+..+ ++..+||+ .|...
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~~---~~l~~~--~~~~~~~~~~~v~~~--------~~~~~KP~p~~~~~a- 211 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAVS---KIVNTL--LGPERAQGLDVFAGD--------DVPKKKPDPDIYNLA- 211 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHHH---HHHHHh--ccccccCceEEEecc--------ccCCCCCCHHHHHHH-
Confidence 458888999999999999999997554433 333221 011111110111111 12234553 33332
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+. + .+ .-.+. +||+.+|+.+=+++|++.
T Consensus 212 ~~~~~-~-~p--~~~l~-IGDs~~Di~aA~~aG~~~ 242 (286)
T PLN02779 212 AETLG-V-DP--SRCVV-VEDSVIGLQAAKAAGMRC 242 (286)
T ss_pred HHHhC-c-Ch--HHEEE-EeCCHHhHHHHHHcCCEE
Confidence 22221 1 11 22444 899999999999999974
No 75
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.68 E-value=0.0035 Score=62.99 Aligned_cols=68 Identities=21% Similarity=0.328 Sum_probs=46.6
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCcee
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVV 790 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvL 790 (912)
.|++||||||+.++.. -..+ ..+..++++++|++|+++|||+.... +.+++.+ +++..|++
T Consensus 1 ~i~~DlDGTLL~~~~~----------~~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~---~~~~~~l-----~~~~~~~I 61 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSY----------DWQP-AAPWLTRLQEAGIPVILCTSKTAAEV---EYLQKAL-----GLTGDPYI 61 (221)
T ss_pred CEEEeCCCCCcCCCCC----------CcHH-HHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHHc-----CCCCCcEE
Confidence 3799999999986521 1223 67899999999999999999998664 4444432 24334666
Q ss_pred eCCCCCC
Q 002531 791 ISPDGLF 797 (912)
Q Consensus 791 LSPd~Lf 797 (912)
+.-..++
T Consensus 62 ~~NGa~i 68 (221)
T TIGR02463 62 AENGAAI 68 (221)
T ss_pred EeCCcEE
Confidence 5544433
No 76
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.63 E-value=0.0009 Score=64.57 Aligned_cols=91 Identities=15% Similarity=0.123 Sum_probs=51.3
Q ss_pred HHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCC---CCCchhhhhhcccCcHHHHHHHHHHH
Q 002531 744 KLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPD---GLFPSLFREVIRRAPHEFKIACLEDI 820 (912)
Q Consensus 744 kLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd---~Lf~ALrREvi~RkPe~FKie~L~dI 820 (912)
++++.++++|++++.+||-+..+. +.++.. .++|.=.++.+.. .-.. ........... =|.++++.+
T Consensus 96 e~i~~~~~~~~~v~IvS~~~~~~i---~~~~~~-----~~i~~~~v~~~~~~~~~~~~-~~~~~~~~~~~-~K~~~l~~~ 165 (192)
T PF12710_consen 96 ELIRELKDNGIKVVIVSGSPDEII---EPIAER-----LGIDDDNVIGNELFDNGGGI-FTGRITGSNCG-GKAEALKEL 165 (192)
T ss_dssp HHHHHHHHTTSEEEEEEEEEHHHH---HHHHHH-----TTSSEGGEEEEEEECTTCCE-EEEEEEEEEES-HHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCcHHHH---HHHHHH-----cCCCceEEEEEeeeecccce-eeeeECCCCCC-cHHHHHHHH
Confidence 899999999999999999866554 444443 3455433333221 0000 00000000000 388888888
Q ss_pred ---HHhCCCCCCcEEEeeCCchhhHHHHH
Q 002531 821 ---KKLFPSDYNPFYAGFGNRDTDELSYR 846 (912)
Q Consensus 821 ---r~LFP~~~nPFyAGFGNR~tDV~aYR 846 (912)
... +....++++ +||..+|+.|.|
T Consensus 166 ~~~~~~-~~~~~~~~~-iGDs~~D~~~lr 192 (192)
T PF12710_consen 166 YIRDEE-DIDPDRVIA-IGDSINDLPMLR 192 (192)
T ss_dssp HHHHHH-THTCCEEEE-EESSGGGHHHHH
T ss_pred HHHhhc-CCCCCeEEE-EECCHHHHHHhC
Confidence 211 123344554 999999999875
No 77
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.63 E-value=0.0042 Score=65.17 Aligned_cols=50 Identities=18% Similarity=0.315 Sum_probs=40.6
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHH
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAY 768 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd 768 (912)
.-|+|++||||||..++.. ..+++.+++++++++|++|+.+|||+.....
T Consensus 3 ~~kli~~DlDGTLl~~~~~-----------~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~ 52 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTY-----------SYEPAKPALKALKEKGIPVIPCTSKTAAEVE 52 (273)
T ss_pred cceEEEEcCcccCcCCCCc-----------CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 3589999999999985421 2356889999999999999999999876543
No 78
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.50 E-value=0.005 Score=63.37 Aligned_cols=52 Identities=17% Similarity=0.392 Sum_probs=40.3
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
+|++||||||..++. .-.+...+.+++++++|++|+.+|||+.. .++..+..
T Consensus 1 li~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~---~~~~~~~~ 52 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------TISPSTKEALAKLREKGIKVVLATGRPYK---EVKNILKE 52 (256)
T ss_pred CEEEeCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH
Confidence 478999999998531 12356889999999999999999999964 34455554
No 79
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.50 E-value=0.0072 Score=64.03 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.++++||++..+|+.+... .+..|.... -+..+. . ++..+. +-.+|| +.|+..
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~---~~~~l~~~~-i~~~f~--~-i~~~d~--------~~~~Kp~p~~~~~~- 166 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERF---VAPLLDQMK-IGRYFR--W-IIGGDT--------LPQKKPDPAALLFV- 166 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHH---HHHHHHHcC-cHhhCe--E-EEecCC--------CCCCCCCcHHHHHH-
Confidence 4688899999999999999999976542 223333210 001111 1 222221 112344 333332
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
++.+ ++ .....+. +||+.+|+.+=+++|++.-
T Consensus 167 ~~~~-g~---~~~~~l~-IGD~~~Di~aA~~aGi~~i 198 (272)
T PRK13223 167 MKMA-GV---PPSQSLF-VGDSRSDVLAAKAAGVQCV 198 (272)
T ss_pred HHHh-CC---ChhHEEE-ECCCHHHHHHHHHCCCeEE
Confidence 2222 11 1123445 9999999999999999853
No 80
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.47 E-value=0.02 Score=58.19 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=69.2
Q ss_pred CeEEEEecCCCccccccc-CccCCCC-------------CCCC-CchHHHHHHHHHHHCCCeEEEEccC-hhhhHHHHHH
Q 002531 709 AKIVISDVDGTITKSDVL-GQFMPLV-------------GKDW-TQSGVAKLFSAIKENGYQLLFLSAR-AIVQAYLTRS 772 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvl-GhilP~l-------------GKDW-th~GVAkLy~~I~~NGYkILYLSgR-pigqAd~TR~ 772 (912)
+++||||+|+|+..---- -|..|+- +..- ..+||.++.+.|+++||++..+|+. +...+. .
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~---~ 78 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAY---E 78 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHH---H
Confidence 689999999999852110 1223321 1111 2679999999999999999999987 554333 3
Q ss_pred HHHhhh--hCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCC--CCCCcEEEeeCCchhhHHHHHhc
Q 002531 773 FLLNLK--QDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFP--SDYNPFYAGFGNRDTDELSYRKI 848 (912)
Q Consensus 773 wL~~~~--Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP--~~~nPFyAGFGNR~tDV~aYRsV 848 (912)
.|.... ..|...|.=.. .+..+. ..+...++|. .+.++.+...+| -.....+. +||+..|+.+=++.
T Consensus 79 ~L~~~~l~~~~~~~~~~~~---Fd~iv~--~~~~~~~kp~---~~i~~~~~~~~~~gl~p~e~l~-VgDs~~di~aA~~a 149 (174)
T TIGR01685 79 ILGTFEITYAGKTVPMHSL---FDDRIE--IYKPNKAKQL---EMILQKVNKVDPSVLKPAQILF-FDDRTDNVREVWGY 149 (174)
T ss_pred HHHhCCcCCCCCcccHHHh---ceeeee--ccCCchHHHH---HHHHHHhhhcccCCCCHHHeEE-EcChhHhHHHHHHh
Confidence 333220 00100000000 011111 0011111111 123444443320 01123444 89999999999999
Q ss_pred CCCC
Q 002531 849 GIPK 852 (912)
Q Consensus 849 GIp~ 852 (912)
|+.+
T Consensus 150 Gi~~ 153 (174)
T TIGR01685 150 GVTS 153 (174)
T ss_pred CCEE
Confidence 9976
No 81
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.43 E-value=0.0061 Score=63.09 Aligned_cols=52 Identities=17% Similarity=0.480 Sum_probs=40.4
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
+|++||||||..++ ..-+...+..++++++|.+|+++|||+... .+.++..+
T Consensus 1 li~~DlDGTLl~~~------------~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~---~~~~~~~l 52 (225)
T TIGR02461 1 VIFTDLDGTLLPPG------------YEPGPAREALEELKDLGFPIVFVSSKTRAE---QEYYREEL 52 (225)
T ss_pred CEEEeCCCCCcCCC------------CCchHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHc
Confidence 58999999999842 123468999999999999999999998775 34455543
No 82
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.41 E-value=0.0063 Score=63.68 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=42.3
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
+.|++||||||..++. .-+|+.+++++++++|.+|++||+.+-.........|+.+
T Consensus 2 ~~~~~D~DGtl~~~~~------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CEEEEeCCCceEcCCe------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 6899999999998632 1347899999999999999999974443334556666543
No 83
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.30 E-value=0.0076 Score=63.77 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=42.5
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
++|+|||||||..++. .-+|+.++++.|+++|.+|+++|+|+..-+.....-|..
T Consensus 3 ~~~~~D~DGtl~~~~~------------~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~ 57 (279)
T TIGR01452 3 QGFIFDCDGVLWLGER------------VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR 57 (279)
T ss_pred cEEEEeCCCceEcCCe------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 6899999999987531 346799999999999999999999975544444444443
No 84
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.29 E-value=0.023 Score=58.75 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=42.9
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
+-++|++|+|||+.... ..-+|+.++++.|+++|+++.++|..+...... ...|..
T Consensus 7 ~~~~~~~D~dG~l~~~~------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~-~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSL-HKTLKS 62 (242)
T ss_pred cCCEEEEecccccccCC------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHH-HHHHHH
Confidence 35789999999998742 235899999999999999999999976543332 245654
No 85
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.26 E-value=0.023 Score=58.34 Aligned_cols=120 Identities=15% Similarity=0.145 Sum_probs=69.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC---ceeeCCCCCCchhhhhhcccCcHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG---PVVISPDGLFPSLFREVIRRAPHEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G---PvLLSPd~Lf~ALrREvi~RkPe~FKie 815 (912)
.+|+.++++.++++| +++.+|+-...... ..++.+ +++.= .+.+..++.+ ....+..++. |.+
T Consensus 70 ~pga~ell~~lk~~~-~~~IVS~~~~~~~~---~il~~l-----gi~~~~an~l~~~~~g~~---tG~~~~~~~~--K~~ 135 (203)
T TIGR02137 70 LEGAVEFVDWLRERF-QVVILSDTFYEFSQ---PLMRQL-----GFPTLLCHKLEIDDSDRV---VGYQLRQKDP--KRQ 135 (203)
T ss_pred CccHHHHHHHHHhCC-eEEEEeCChHHHHH---HHHHHc-----CCchhhceeeEEecCCee---ECeeecCcch--HHH
Confidence 679999999999975 99999997665444 444432 22210 0111110111 1111223344 888
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeecccccc---cchhhhhccc
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDV---KSYTSLHTLV 882 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~~~~~~---kSY~~L~elV 882 (912)
.++.++.. + ...++ +||..+|+.+.+.+|++. .++++-.+. ...... .+|..|-+.+
T Consensus 136 ~l~~l~~~---~-~~~v~-vGDs~nDl~ml~~Ag~~i----a~~ak~~~~-~~~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 136 SVIAFKSL---Y-YRVIA-AGDSYNDTTMLSEAHAGI----LFHAPENVI-REFPQFPAVHTYEDLKREF 195 (203)
T ss_pred HHHHHHhh---C-CCEEE-EeCCHHHHHHHHhCCCCE----EecCCHHHH-HhCCCCCcccCHHHHHHHH
Confidence 88877653 1 24555 999999999999999985 445554443 233222 3565554433
No 86
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.22 E-value=0.0088 Score=63.97 Aligned_cols=92 Identities=18% Similarity=0.190 Sum_probs=51.8
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 818 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~ 818 (912)
.+|+.++++.|+++|+++..+|+..... ++..|+.+. -...|- .++..+ . ..++++ .+.
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~---~~~~L~~~g-l~~~F~---~vi~~~--------~-~~~k~~-----~~~ 202 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQN---IEAFLQRQG-LRSLFS---VVQAGT--------P-ILSKRR-----ALS 202 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHcC-ChhheE---EEEecC--------C-CCCCHH-----HHH
Confidence 4588999999999999999999876433 344444320 000010 011111 1 112333 233
Q ss_pred HHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 819 DIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 819 dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
.+...+.-...-.+. |||+..|+.+=+++|+..
T Consensus 203 ~~l~~~~~~p~~~l~-IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 203 QLVAREGWQPAAVMY-VGDETRDVEAARQVGLIA 235 (273)
T ss_pred HHHHHhCcChhHEEE-ECCCHHHHHHHHHCCCeE
Confidence 332222111123444 899999999999999965
No 87
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.22 E-value=0.0074 Score=58.44 Aligned_cols=124 Identities=14% Similarity=0.016 Sum_probs=71.8
Q ss_pred CeEEEEecCCCcccccc---cCccCCCCCC------------CCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHH
Q 002531 709 AKIVISDVDGTITKSDV---LGQFMPLVGK------------DWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSF 773 (912)
Q Consensus 709 ~KVVISDIDGTITkSDv---lGhilP~lGK------------DWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~w 773 (912)
.+.+|.|+||||-.+-. .+-..+-..- -...+|+.+++..++ ++|++..+|+..-..+...-+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHH
Confidence 46899999999998632 1111110000 123789999999998 6799999999887766654333
Q ss_pred HHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 774 LLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 774 L~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
|. + ...+ .+.++. +.++...||+ +++.++.+ .....-.+. |||+..|+.+-++.||++.
T Consensus 81 l~--------~-~~~~---f~~i~~--~~d~~~~KP~-----~~k~l~~l-~~~p~~~i~-i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 81 LD--------P-KKYF---GYRRLF--RDECVFVKGK-----YVKDLSLL-GRDLSNVII-IDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred hC--------c-CCCE---eeeEEE--CccccccCCe-----EeecHHHc-CCChhcEEE-EECCHHHhhcCccCEEEec
Confidence 21 0 0000 011111 2233445665 33333332 111223344 8999999999988888765
Q ss_pred c
Q 002531 854 K 854 (912)
Q Consensus 854 R 854 (912)
.
T Consensus 140 ~ 140 (148)
T smart00577 140 P 140 (148)
T ss_pred C
Confidence 3
No 88
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=96.22 E-value=0.021 Score=58.40 Aligned_cols=92 Identities=23% Similarity=0.312 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchh--hhhhcccCcHHHHHH-
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSL--FREVIRRAPHEFKIA- 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~AL--rREvi~RkPe~FKie- 815 (912)
-+||.++...|+..||++..+|+++..-...+-+.+- .. .+|... ....-.+||+--.+.
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~g------l~-----------~~F~~i~g~~~~~~~KP~P~~l~~ 153 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELDILLKALG------LA-----------DYFDVIVGGDDVPPPKPDPEPLLL 153 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhC------Cc-----------cccceEEcCCCCCCCCcCHHHHHH
Confidence 5689999999999999999999998776655554431 11 112111 122345566643333
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+++.+..- |. ..++ .||+..|+.|=+++|+++
T Consensus 154 ~~~~~~~~-~~--~~l~--VGDs~~Di~aA~~Ag~~~ 185 (220)
T COG0546 154 LLEKLGLD-PE--EALM--VGDSLNDILAAKAAGVPA 185 (220)
T ss_pred HHHHhCCC-hh--heEE--ECCCHHHHHHHHHcCCCE
Confidence 22333211 10 1233 699999999999999763
No 89
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.19 E-value=0.0089 Score=61.95 Aligned_cols=52 Identities=12% Similarity=0.245 Sum_probs=39.7
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
+|++||||||+.++.. ..+...+..++++++|++|+++|||+... .+.+++.
T Consensus 1 li~~DlDGTll~~~~~-----------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~---~~~~~~~ 52 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGY-----------DWGPAKEVLERLQELGIPVIPCTSKTAAE---VEYLRKE 52 (256)
T ss_pred CEEEcCCCCCcCCCCc-----------CchHHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHH
Confidence 4789999999986420 11246889999999999999999999875 3445554
No 90
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.14 E-value=0.012 Score=58.43 Aligned_cols=48 Identities=15% Similarity=0.395 Sum_probs=38.5
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHH
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAY 768 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd 768 (912)
+|++||||||+.++. + -..+.+.+..++++++|.+|+++|||+.....
T Consensus 1 li~~D~DgTL~~~~~--~--------~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~ 48 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA--H--------ELSPETIEALERLREAGVKVVLVTGRSLAEIK 48 (204)
T ss_pred CEEEeCcCCCcCCCC--C--------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 478999999998541 1 12467889999999999999999999986544
No 91
>PHA02597 30.2 hypothetical protein; Provisional
Probab=96.01 E-value=0.022 Score=56.36 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=47.9
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchh-hhhhcccCcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSL-FREVIRRAPHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~AL-rREvi~RkPe~FKie~L 817 (912)
.+|+.+++++|+++ |+++++|+.+..........|. + ...|| +.|... -.+....||+.|+.
T Consensus 76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~-l---~~~f~---------~~f~~i~~~~~~~~kp~~~~~--- 138 (197)
T PHA02597 76 YDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFN-L---NALFP---------GAFSEVLMCGHDESKEKLFIK--- 138 (197)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCC-H---HHhCC---------CcccEEEEeccCcccHHHHHH---
Confidence 45888999999886 6778888865433222221110 0 00111 011100 00111224543333
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCCC
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPKG 853 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~~ 853 (912)
+...+.+ ...+. +||+..|+.+=+++ ||+.-
T Consensus 139 --a~~~~~~--~~~v~-vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 139 --AKEKYGD--RVVCF-VDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred --HHHHhCC--CcEEE-eCCCHHHHHHHHHHHcCCcEE
Confidence 2222221 22333 89999999999998 99853
No 92
>PLN02887 hydrolase family protein
Probab=96.00 E-value=0.011 Score=69.71 Aligned_cols=63 Identities=19% Similarity=0.235 Sum_probs=48.7
Q ss_pred EEEEeecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 700 AHLYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 700 a~IYLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
+.+-+++..-|+|++||||||..++.. -.+...+..++++++|++|+.+|||+.... +.++..
T Consensus 299 ~~~~~~~~~iKLIa~DLDGTLLn~d~~-----------Is~~t~eAI~kl~ekGi~~vIATGR~~~~i---~~~l~~ 361 (580)
T PLN02887 299 GSLRFYKPKFSYIFCDMDGTLLNSKSQ-----------ISETNAKALKEALSRGVKVVIATGKARPAV---IDILKM 361 (580)
T ss_pred cchhhhccCccEEEEeCCCCCCCCCCc-----------cCHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH
Confidence 455566677899999999999986521 235577899999999999999999998754 344543
No 93
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.93 E-value=0.095 Score=56.95 Aligned_cols=121 Identities=16% Similarity=0.167 Sum_probs=72.0
Q ss_pred CCeEEEEecCCCcccccccCccCCC-CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPL-VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN 786 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~-lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~ 786 (912)
..|+||+|+|+||... ++|--.+. +.-.-.++|+.++...+++.|+++-.+|..+.. .++..|..+ |.
T Consensus 2 ~~k~~v~DlDnTlw~g-v~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~---~a~~~l~~~-------~~ 70 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGG-VLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDED---DAKKVFERR-------KD 70 (320)
T ss_pred CeEEEEEcCCCCCCCC-EEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHhC-------cc
Confidence 4699999999999963 22211111 111123789999999999999999999998763 455566543 10
Q ss_pred CceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcC
Q 002531 787 GPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIG 849 (912)
Q Consensus 787 GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVG 849 (912)
. +++. ..|..+ .+..+| |-+.+..|...+.-+..-++. +||+..|+.+-++.+
T Consensus 71 ~-~~~~--~~f~~~---~~~~~p---k~~~i~~~~~~l~i~~~~~vf-idD~~~d~~~~~~~l 123 (320)
T TIGR01686 71 F-ILQA--EDFDAR---SINWGP---KSESLRKIAKKLNLGTDSFLF-IDDNPAERANVKITL 123 (320)
T ss_pred c-cCcH--HHeeEE---EEecCc---hHHHHHHHHHHhCCCcCcEEE-ECCCHHHHHHHHHHC
Confidence 0 1111 112211 122344 344444443333223344565 899999999998853
No 94
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.92 E-value=0.019 Score=64.86 Aligned_cols=95 Identities=11% Similarity=0.133 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHH
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLED 819 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~d 819 (912)
+|+.++++.|+++||++-.+|+++... ++..|+.+. -..+-+ .++...+. . ....+|+.|.. +++.
T Consensus 219 pGa~ElL~~Lk~~GiklaIaSn~~~~~---~~~~L~~lg--L~~yFd-~Iv~sddv-~------~~KP~Peifl~-A~~~ 284 (381)
T PLN02575 219 TGSQEFVNVLMNYKIPMALVSTRPRKT---LENAIGSIG--IRGFFS-VIVAAEDV-Y------RGKPDPEMFIY-AAQL 284 (381)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHcC--CHHHce-EEEecCcC-C------CCCCCHHHHHH-HHHH
Confidence 488899999999999999999987543 444444320 001111 12222111 0 01223444432 2222
Q ss_pred HHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 820 IKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 820 Ir~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
+. + .+ .-.+. |||+..|+.+=+++|+.+-
T Consensus 285 lg-l-~P--eecl~-IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 285 LN-F-IP--ERCIV-FGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred cC-C-Cc--ccEEE-EcCCHHHHHHHHHcCCEEE
Confidence 22 1 12 12344 9999999999999999643
No 95
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=95.69 E-value=0.027 Score=58.16 Aligned_cols=28 Identities=25% Similarity=0.457 Sum_probs=20.8
Q ss_pred EEEeeCCc-hhhHHHHHhcCCCCCcEEEECCCC
Q 002531 831 FYAGFGNR-DTDELSYRKIGIPKGKIFIINPKG 862 (912)
Q Consensus 831 FyAGFGNR-~tDV~aYRsVGIp~~RIFiInpkG 862 (912)
.+. +||+ ..|+.+=+++|+.. |+ |+..+
T Consensus 183 ~~~-VGD~~~~Di~~A~~aG~~~--i~-v~~~~ 211 (238)
T PRK10748 183 ILH-VGDDLTTDVAGAIRCGMQA--CW-INPEN 211 (238)
T ss_pred EEE-EcCCcHHHHHHHHHCCCeE--EE-EcCCC
Confidence 444 7999 59999999999976 44 45543
No 96
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.59 E-value=0.041 Score=62.40 Aligned_cols=92 Identities=14% Similarity=0.058 Sum_probs=55.8
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 818 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~ 818 (912)
.+|+.++++.|+++||++..+|+..........+.+... ..|. .++. .+.. . -.+||+.|...+ +
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~----~~f~--~i~~-~d~v-~------~~~kP~~~~~al-~ 396 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD----QWVT--ETFS-IEQI-N------SLNKSDLVKSIL-N 396 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH----hhcc--eeEe-cCCC-C------CCCCcHHHHHHH-H
Confidence 468899999999999999999997765544443332110 0111 1222 2111 0 125777554432 2
Q ss_pred HHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 819 DIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 819 dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
.+ .+ ...++ +||+.+|+.+=+++|+..
T Consensus 397 ~l----~~--~~~v~-VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 397 KY----DI--KEAAV-VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred hc----Cc--ceEEE-EeCCHHHHHHHHHCCCeE
Confidence 22 22 23444 899999999999999964
No 97
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.49 E-value=0.035 Score=58.98 Aligned_cols=54 Identities=19% Similarity=0.227 Sum_probs=40.3
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHH-CCCeEEEEccChhhhHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKE-NGYQLLFLSARAIVQAY 768 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~-NGYkILYLSgRpigqAd 768 (912)
..+|++|+||||+.. .+--......+...+.+++|++ +|.+|+++|||+.....
T Consensus 14 ~~li~~D~DGTLl~~------~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~ 68 (266)
T PRK10187 14 NYAWFFDLDGTLAEI------KPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELD 68 (266)
T ss_pred CEEEEEecCCCCCCC------CCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHH
Confidence 478999999999963 0111111335788999999987 79999999999987553
No 98
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.26 E-value=0.083 Score=54.92 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=76.5
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhccc-CcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRR-APHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~R-kPe~FKie~L 817 (912)
.+|+.+|.+.+++.|++++.+||-+........+-|.-..- -+-.+...++.+ ...+..+ -...-|...|
T Consensus 79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~------~an~l~~~dG~l---tG~v~g~~~~~~~K~~~l 149 (212)
T COG0560 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYV------VANELEIDDGKL---TGRVVGPICDGEGKAKAL 149 (212)
T ss_pred CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchh------eeeEEEEeCCEE---eceeeeeecCcchHHHHH
Confidence 56888999999999999999999999888887777743211 112222222211 1111111 1112388888
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceee
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAI 866 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~ 866 (912)
+++.+.+.....--|| |||..+|.-|.+.+|.+ +.+||++++..
T Consensus 150 ~~~~~~~g~~~~~~~a-~gDs~nDlpml~~ag~~----ia~n~~~~l~~ 193 (212)
T COG0560 150 RELAAELGIPLEETVA-YGDSANDLPMLEAAGLP----IAVNPKPKLRA 193 (212)
T ss_pred HHHHHHcCCCHHHeEE-EcCchhhHHHHHhCCCC----eEeCcCHHHHH
Confidence 8887755433223455 99999999999999998 58999988753
No 99
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=95.24 E-value=0.089 Score=57.17 Aligned_cols=56 Identities=18% Similarity=0.286 Sum_probs=48.4
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
-+++++|+||||-+.. ..-+|+++..+.|+++|-+++|||-.+..-+....+-|..
T Consensus 8 y~~~l~DlDGvl~~G~------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 8 YDGFLFDLDGVLYRGN------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCEEEEcCcCceEeCC------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 4679999999999853 4578999999999999999999999998888877777764
No 100
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.23 E-value=0.036 Score=66.76 Aligned_cols=52 Identities=29% Similarity=0.399 Sum_probs=40.7
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTR 771 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR 771 (912)
.|+|++||||||+.++.. ..+-..+.+++++++|++|+.+|||+........
T Consensus 416 ~KLIfsDLDGTLLd~d~~-----------i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~ 467 (694)
T PRK14502 416 KKIVYTDLDGTLLNPLTY-----------SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYR 467 (694)
T ss_pred eeEEEEECcCCCcCCCCc-----------cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH
Confidence 589999999999986531 1124578899999999999999999987544443
No 101
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=95.12 E-value=0.058 Score=58.37 Aligned_cols=70 Identities=20% Similarity=0.325 Sum_probs=56.7
Q ss_pred CCeEEEEecCCCccccccc-C----ccCCCCCCCCC----------chHHHHHHHHHHHCCCeEEEEccChhhh-HHHHH
Q 002531 708 NAKIVISDVDGTITKSDVL-G----QFMPLVGKDWT----------QSGVAKLFSAIKENGYQLLFLSARAIVQ-AYLTR 771 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvl-G----hilP~lGKDWt----------h~GVAkLy~~I~~NGYkILYLSgRpigq-Ad~TR 771 (912)
..++||.|||-||...-.- | +=-+|-.++|+ -+|+.++.+-..+||-+|+|+|-|.... .+-|.
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~ 157 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI 157 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence 3569999999999964322 2 23356788886 4599999999999999999999999877 89999
Q ss_pred HHHHhh
Q 002531 772 SFLLNL 777 (912)
Q Consensus 772 ~wL~~~ 777 (912)
+=|.+.
T Consensus 158 ~nLk~~ 163 (274)
T COG2503 158 ENLKSE 163 (274)
T ss_pred HHHHHc
Confidence 888853
No 102
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=95.10 E-value=0.034 Score=57.54 Aligned_cols=52 Identities=15% Similarity=0.219 Sum_probs=38.6
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHH
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYL 769 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~ 769 (912)
.+|++|+||||+.++- +..-..+...+++++++++|-+|+++|||+......
T Consensus 2 ~li~tDlDGTLl~~~~--------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~ 53 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTD--------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKE 53 (249)
T ss_pred eEEEEcCCCcCcCCCC--------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHH
Confidence 4789999999997420 111123567788888899999999999999875443
No 103
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=94.99 E-value=0.051 Score=52.91 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=15.5
Q ss_pred eCCchhhHHHHHhcCCCC
Q 002531 835 FGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 835 FGNR~tDV~aYRsVGIp~ 852 (912)
+||+..|+.+=+++|++.
T Consensus 165 igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 165 FEDADFGIQAARAAGMDA 182 (188)
T ss_pred EeccHhhHHHHHHCCCEE
Confidence 799999999999999863
No 104
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.89 E-value=0.049 Score=68.41 Aligned_cols=92 Identities=16% Similarity=0.156 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCC---CCceeeCCCCCCchhhhhhcccCcHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALP---NGPVVISPDGLFPSLFREVIRRAPHEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP---~GPvLLSPd~Lf~ALrREvi~RkPe~FKie 815 (912)
.+|+.++++.|+++||++..+|+......+. .|+.. +|+ --.++...+. . ...++|+.|..
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~---~L~~~-----gl~~~~Fd~iv~~~~~-----~--~~KP~Pe~~~~- 226 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKVDA---NLAAA-----GLPLSMFDAIVSADAF-----E--NLKPAPDIFLA- 226 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHH---HHHHc-----CCChhHCCEEEECccc-----c--cCCCCHHHHHH-
Confidence 4588888899999999999999976655443 34432 221 0122222111 0 01334565643
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
+++.+. +-|. -.+. +||+..|+.+=+++|+.
T Consensus 227 a~~~lg-v~p~---e~v~-IgDs~~Di~AA~~aGm~ 257 (1057)
T PLN02919 227 AAKILG-VPTS---ECVV-IEDALAGVQAARAAGMR 257 (1057)
T ss_pred HHHHcC-cCcc---cEEE-EcCCHHHHHHHHHcCCE
Confidence 444443 2122 2334 89999999999999985
No 105
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.55 E-value=0.055 Score=56.26 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=39.5
Q ss_pred EEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 712 VISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 712 VISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
||||+||||..++. .-+|+.+.++.++.+|++++++|..+-.-.....++|..
T Consensus 1 ~lfD~DGvL~~~~~------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCCc------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 68999999998632 246899999999999999999994443333444455554
No 106
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=94.54 E-value=0.1 Score=54.06 Aligned_cols=80 Identities=20% Similarity=0.296 Sum_probs=50.0
Q ss_pred CCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEE
Q 002531 753 GYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFY 832 (912)
Q Consensus 753 GYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFy 832 (912)
-.+++|.|||.--....|..||..- ++ +++.|+- .. ..+ |.+|.+...= .-|+
T Consensus 87 ~~~L~~itar~~dl~~iT~~~l~~q-----~i-------h~~~l~i------~g-~h~--KV~~vrth~i------dlf~ 139 (194)
T COG5663 87 EHRLIYITARKADLTRITYAWLFIQ-----NI-------HYDHLEI------VG-LHH--KVEAVRTHNI------DLFF 139 (194)
T ss_pred hceeeeeehhhHHHHHHHHHHHHHh-----cc-------chhhhhh------hc-ccc--cchhhHhhcc------Cccc
Confidence 4789999999999999999999853 33 3444321 22 222 7777775431 1222
Q ss_pred EeeCCchhhHHHHHhcCCCCCcEEEECC-CCce
Q 002531 833 AGFGNRDTDELSYRKIGIPKGKIFIINP-KGEV 864 (912)
Q Consensus 833 AGFGNR~tDV~aYRsVGIp~~RIFiInp-kGel 864 (912)
+ ++-++-..+-|.+|+|.- .||. .+++
T Consensus 140 e--d~~~na~~iAk~~~~~vi---lins~ynRk 167 (194)
T COG5663 140 E--DSHDNAGQIAKNAGIPVI---LINSPYNRK 167 (194)
T ss_pred c--ccCchHHHHHHhcCCcEE---EecCccccc
Confidence 2 345556677777898764 4454 3444
No 107
>PLN02423 phosphomannomutase
Probab=94.48 E-value=0.083 Score=55.49 Aligned_cols=44 Identities=14% Similarity=0.276 Sum_probs=33.9
Q ss_pred CeE-EEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChh
Q 002531 709 AKI-VISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAI 764 (912)
Q Consensus 709 ~KV-VISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpi 764 (912)
.++ +.+||||||..++.. -.+...+++++++++ ++|+.+|||+.
T Consensus 6 ~~~i~~~D~DGTLl~~~~~-----------i~~~~~~ai~~l~~~-i~fviaTGR~~ 50 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRKE-----------ATPEMLEFMKELRKV-VTVGVVGGSDL 50 (245)
T ss_pred cceEEEEeccCCCcCCCCc-----------CCHHHHHHHHHHHhC-CEEEEECCcCH
Confidence 454 559999999987522 125678899999977 99999999943
No 108
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.31 E-value=0.26 Score=52.74 Aligned_cols=77 Identities=22% Similarity=0.392 Sum_probs=56.9
Q ss_pred CCeEEEEecCCCccccc-ccCc----------cCCC----------CCCCC------------CchHHHHHHHHHHHCCC
Q 002531 708 NAKIVISDVDGTITKSD-VLGQ----------FMPL----------VGKDW------------TQSGVAKLFSAIKENGY 754 (912)
Q Consensus 708 ~~KVVISDIDGTITkSD-vlGh----------ilP~----------lGKDW------------th~GVAkLy~~I~~NGY 754 (912)
.+-.||+|||-||..+. .+|+ +.+. +..+| .++.+.++++.|++.|.
T Consensus 19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~ 98 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI 98 (252)
T ss_pred CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence 56679999999999765 3332 1010 11122 25678899999999999
Q ss_pred eEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC
Q 002531 755 QLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG 787 (912)
Q Consensus 755 kILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G 787 (912)
++|-||+|+..++..|-..|+++ |..|-.-
T Consensus 99 ~v~alT~~~~~~~~~t~~~Lk~~---gi~fs~~ 128 (252)
T PF11019_consen 99 PVIALTARGPNMEDWTLRELKSL---GIDFSSS 128 (252)
T ss_pred cEEEEcCCChhhHHHHHHHHHHC---CCCcccc
Confidence 99999999999999999999875 5555444
No 109
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=94.24 E-value=0.11 Score=57.44 Aligned_cols=63 Identities=13% Similarity=0.157 Sum_probs=46.7
Q ss_pred EEeecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 702 LYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 702 IYLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
-++|.. .++|+||+||||....... .-..+|+.+++..++++|+++..+|+++-..+. ..|..
T Consensus 120 ~~~~~~-~kvIvFDLDgTLi~~~~~v--------~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~---~~L~~ 182 (301)
T TIGR01684 120 SKVFEP-PHVVVFDLDSTLITDEEPV--------RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVV---ESMRK 182 (301)
T ss_pred cccccc-ceEEEEecCCCCcCCCCcc--------ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHH---HHHHH
Confidence 356644 5799999999999853210 123589999999999999999999987655443 45554
No 110
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.10 E-value=0.13 Score=47.76 Aligned_cols=93 Identities=22% Similarity=0.359 Sum_probs=55.5
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcH--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie~ 816 (912)
.+|+.++++.++++||++..+|..+. ..++..|+.+.- ..+++. ++.+ .+.-.+||+ .|+. +
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~---~~~~~~l~~~~~--~~~f~~-i~~~---------~~~~~~Kp~~~~~~~-~ 142 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSR---ERIERVLERLGL--DDYFDE-IISS---------DDVGSRKPDPDAYRR-A 142 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEH---HHHHHHHHHTTH--GGGCSE-EEEG---------GGSSSSTTSHHHHHH-H
T ss_pred hhhhhhhhhhcccccceeEEeecCCc---cccccccccccc--cccccc-cccc---------chhhhhhhHHHHHHH-H
Confidence 55899999999999999999999964 444455554310 122332 1111 122234553 2322 2
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++++ ++ ++ ..++. +||+..|+.+-+++|+..
T Consensus 143 ~~~~-~~-~p--~~~~~-vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 143 LEKL-GI-PP--EEILF-VGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHH-TS-SG--GGEEE-EESSHHHHHHHHHTTSEE
T ss_pred HHHc-CC-Cc--ceEEE-EeCCHHHHHHHHHcCCeE
Confidence 2222 11 22 23444 899999999999999875
No 111
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=94.03 E-value=0.061 Score=58.57 Aligned_cols=52 Identities=13% Similarity=0.211 Sum_probs=40.4
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHC----CCeEEEEccChhhhHHHHHHHH
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKEN----GYQLLFLSARAIVQAYLTRSFL 774 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~N----GYkILYLSgRpigqAd~TR~wL 774 (912)
+||||+||||..+.. ..+|+.+.++.|..+ |+++++||...-.-.....++|
T Consensus 2 ~~ifD~DGvL~~g~~------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECCcc------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 689999999998632 278999999999998 9999999976544334444444
No 112
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=94.00 E-value=0.2 Score=49.63 Aligned_cols=94 Identities=17% Similarity=0.226 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.++++||++..+|+... ..++.+|+.+. -..+.. .+..+. ++..+|| +.|..
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~---~~~~~~l~~~~--l~~~f~-~~~~~~---------~~~~~Kp~p~~~~~-- 149 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPT---PLARPLLELLG--LAKYFS-VLIGGD---------SLAQRKPHPDPLLL-- 149 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHcC--cHhhCc-EEEecC---------CCCCCCCChHHHHH--
Confidence 56899999999999999999999755 34555665431 001111 122211 1112344 43432
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
+...+.-...-.+. +||+.+|+.+-+++|+++-
T Consensus 150 ---~~~~~~~~~~~~~~-igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 150 ---AAERLGVAPQQMVY-VGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred ---HHHHcCCChhHeEE-eCCCHHHHHHHHHCCCeEE
Confidence 22222211122444 9999999999999999764
No 113
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=93.84 E-value=0.16 Score=52.63 Aligned_cols=94 Identities=19% Similarity=0.236 Sum_probs=56.3
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 818 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~ 818 (912)
-+||.++.+.|+.+|.++.-.|+.+-.. ++..|..+ | -++.=+.++. ..++...||+ .--+|.
T Consensus 88 ~pGv~~~l~~L~~~~i~~avaS~s~~~~---~~~~L~~~---g-l~~~f~~~v~--------~~dv~~~KP~--Pd~yL~ 150 (221)
T COG0637 88 IPGVVELLEQLKARGIPLAVASSSPRRA---AERVLARL---G-LLDYFDVIVT--------ADDVARGKPA--PDIYLL 150 (221)
T ss_pred CccHHHHHHHHHhcCCcEEEecCChHHH---HHHHHHHc---c-Chhhcchhcc--------HHHHhcCCCC--CHHHHH
Confidence 4599999999999998888888876433 23333322 0 0110011111 2334444555 445666
Q ss_pred HHHHh-CCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 819 DIKKL-FPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 819 dIr~L-FP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
..+.| +.+. - ..+|.|...-+.+-+++|+.+
T Consensus 151 Aa~~Lgv~P~--~-CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 151 AAERLGVDPE--E-CVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHcCCChH--H-eEEEecchhHHHHHHHCCCEE
Confidence 66654 3332 2 345999999999999999865
No 114
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=93.80 E-value=0.29 Score=49.96 Aligned_cols=128 Identities=21% Similarity=0.241 Sum_probs=66.5
Q ss_pred CeEEEEecCCCcccccccCccCC-C------------CCCCC-CchHHHHHHHHHHHCCCeEEEEcc--ChhhhHHHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMP-L------------VGKDW-TQSGVAKLFSAIKENGYQLLFLSA--RAIVQAYLTRS 772 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP-~------------lGKDW-th~GVAkLy~~I~~NGYkILYLSg--RpigqAd~TR~ 772 (912)
+|+||||+|+||-.--.--|+.| + .|..- -.++|..+++.|+.+|.+|-+.|- .| +..|+
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P----~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP----DWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H----HHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh----HHHHH
Confidence 68999999999985322223332 1 12211 267999999999999999999984 45 44455
Q ss_pred HHHhhhhCCCCCC--CCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 773 FLLNLKQDGNALP--NGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 773 wL~~~~Q~G~~LP--~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
-|... .++ .|+.. +-..+|.. .| |.+. =|..-++.|+.--.-.+.-+.. |+|...-+..=+++|+
T Consensus 79 ~L~~l-----~i~~~~~~~~-~~~~~F~~--~e-I~~g---sK~~Hf~~i~~~tgI~y~eMlF-FDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 79 LLKLL-----EIDDADGDGV-PLIEYFDY--LE-IYPG---SKTTHFRRIHRKTGIPYEEMLF-FDDESRNIEVVSKLGV 145 (169)
T ss_dssp HHHHT-----T-C-----------CCECE--EE-ESSS----HHHHHHHHHHHH---GGGEEE-EES-HHHHHHHHTTT-
T ss_pred HHHhc-----CCCccccccc-cchhhcch--hh-eecC---chHHHHHHHHHhcCCChhHEEE-ecCchhcceeeEecCc
Confidence 55543 222 11111 11123321 12 3332 2666666666443334556677 9998888888888999
Q ss_pred CCC
Q 002531 851 PKG 853 (912)
Q Consensus 851 p~~ 853 (912)
.+-
T Consensus 146 ~~v 148 (169)
T PF12689_consen 146 TCV 148 (169)
T ss_dssp EEE
T ss_pred EEE
Confidence 873
No 115
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=92.95 E-value=0.24 Score=54.95 Aligned_cols=64 Identities=17% Similarity=0.241 Sum_probs=45.8
Q ss_pred EEeecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 702 LYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 702 IYLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
.++|.. .++|+||+||||..++-- + .-..+||.++...|+++|+++..+|+.+...+ +..|..+
T Consensus 122 ~~~~~~-~~~i~~D~D~TL~~~~~~--v------~irdp~V~EtL~eLkekGikLaIvTNg~Re~v---~~~Le~l 185 (303)
T PHA03398 122 SLVWEI-PHVIVFDLDSTLITDEEP--V------RIRDPFVYDSLDELKERGCVLVLWSYGNREHV---VHSLKET 185 (303)
T ss_pred eeEeee-ccEEEEecCCCccCCCCc--c------ccCChhHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHHc
Confidence 344433 589999999999986321 1 12248999999999999999999996644433 5566543
No 116
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=92.93 E-value=0.11 Score=53.28 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=32.4
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHH
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAY 768 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd 768 (912)
+|++|+||||+.++.. ++ ...++++ .+++|.+|+++|||+.....
T Consensus 1 li~~DlDgTLl~~~~~----------~~--~~~~~~~-~~~~gi~~viaTGR~~~~v~ 45 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG----------LA--SFVELLR-GSGDAVGFGIATGRSVESAK 45 (236)
T ss_pred CeEEeccccccCCHHH----------HH--HHHHHHH-hcCCCceEEEEeCCCHHHHH
Confidence 4789999999985422 11 1225666 58889999999999986543
No 117
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=92.82 E-value=0.42 Score=47.70 Aligned_cols=95 Identities=23% Similarity=0.252 Sum_probs=54.7
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L 817 (912)
.+|+.++.+.|+++||++..+|+....... ..|... |. .+.+. +.. .+. ...+||+ .+++
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~---~~l~~~---~l~~~f~~-i~~-~~~--------~~~~KP~---~~~~ 137 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRAR---SLLEAL---GLLPLFDH-VIG-SDE--------VPRPKPA---PDIV 137 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHH---HHHHHc---CChhheee-EEe-cCc--------CCCCCCC---hHHH
Confidence 468999999999999999999997655433 344432 10 11111 111 111 1123453 2233
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCC
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKG 853 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~ 853 (912)
..+...+.-.....+. +||+..|+.+=+++|++.-
T Consensus 138 ~~~~~~~~~~~~~~l~-igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 138 REALRLLDVPPEDAVM-VGDAVTDLASARAAGTATV 172 (205)
T ss_pred HHHHHHcCCChhheEE-EcCCHHHHHHHHHcCCeEE
Confidence 3332222211122344 8999999999999999854
No 118
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=92.72 E-value=0.14 Score=54.01 Aligned_cols=48 Identities=19% Similarity=0.427 Sum_probs=34.2
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHH---HCCCeEEEEccChhhhHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIK---ENGYQLLFLSARAIVQAYLT 770 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~---~NGYkILYLSgRpigqAd~T 770 (912)
++++++|+|||++..+ ..+.+.|..-++ ..+-.|+|+|||...++...
T Consensus 2 ~~ll~sDlD~Tl~~~~--------------~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~ 52 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD--------------DEALARLEELLEQQARPEILFVYVTGRSLESVLRL 52 (247)
T ss_dssp SEEEEEETBTTTBHCH--------------HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHH
T ss_pred CEEEEEECCCCCcCCC--------------HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHH
Confidence 4789999999999221 245666666666 66789999999999876544
No 119
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=92.62 E-value=0.22 Score=49.99 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHH
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 818 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~ 818 (912)
+|+.++++.|+++|+++..+|+.... .++..|... |. .+.. .++. .+.. .+ -..+|+.|+.. ++
T Consensus 85 ~g~~~~l~~L~~~g~~~~i~S~~~~~---~~~~~l~~~---gl~~~f~-~i~~-~~~~----~~--~Kp~p~~~~~~-~~ 149 (214)
T PRK13288 85 ETVYETLKTLKKQGYKLGIVTTKMRD---TVEMGLKLT---GLDEFFD-VVIT-LDDV----EH--AKPDPEPVLKA-LE 149 (214)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHc---CChhcee-EEEe-cCcC----CC--CCCCcHHHHHH-HH
Confidence 58899999999999999999998743 334444432 10 1111 1111 1110 00 12344544432 22
Q ss_pred HHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 819 DIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 819 dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++. -.....+. +||+.+|+.+=+++|++.
T Consensus 150 ~~~----~~~~~~~~-iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 150 LLG----AKPEEALM-VGDNHHDILAGKNAGTKT 178 (214)
T ss_pred HcC----CCHHHEEE-ECCCHHHHHHHHHCCCeE
Confidence 221 11122444 899999999999999975
No 120
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=92.38 E-value=0.16 Score=49.07 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=44.9
Q ss_pred eEEEEecCCCcccccccCccCCC---------CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHH
Q 002531 710 KIVISDVDGTITKSDVLGQFMPL---------VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~---------lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~ 775 (912)
|++|.|+||||..+...... +. -..-+.+||+.+++..+.+ .|.++..|+.....+..+..+|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~-~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPL-PYDFKIIDQRGGYYVKLRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCT-T-SEEEETEEEEEEEEE-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCC-CcccceeccccceeEeeCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhhh
Confidence 68999999999987655322 10 0011248999999999955 59999999999988888888885
No 121
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=92.31 E-value=0.13 Score=51.13 Aligned_cols=64 Identities=19% Similarity=0.202 Sum_probs=46.3
Q ss_pred eEEEEecCCCcccccccCccC-CC-----C--C---CC---CCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHH
Q 002531 710 KIVISDVDGTITKSDVLGQFM-PL-----V--G---KD---WTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhil-P~-----l--G---KD---Wth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~ 775 (912)
+.+|.|+|+||-.+... ... +. + + .. +.+||+.+++..++++ |.|+..|+-....|....+.|.
T Consensus 2 ~~lvlDLDeTLi~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ld 79 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFK-MPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILD 79 (162)
T ss_pred cEEEEcCCCCcCCCCCC-CCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHC
Confidence 57999999999987433 110 00 0 1 01 2589999999999988 9999999988777777666553
No 122
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=92.14 E-value=0.74 Score=46.02 Aligned_cols=94 Identities=23% Similarity=0.314 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC-CceeeCCCCCCchhhhhhcccCcHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN-GPVVISPDGLFPSLFREVIRRAPHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~-GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L 817 (912)
.+|+.+++..+++.|+++..+|+.... ..+.+|..+ +|.. -..++..+. +..+||. -+.+
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~-----~l~~~f~~~~~~~~--------~~~~kp~---~~~~ 155 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTP---FVAPLLEAL-----GIADYFSVVIGGDS--------LPNKKPD---PAPL 155 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHc-----CCccCccEEEcCCC--------CCCCCcC---hHHH
Confidence 468899999999999999999998754 334555533 1110 001111111 1122332 1223
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
..+...+.......+. |||+.+|+.+-+++|++.
T Consensus 156 ~~~~~~~~~~~~~~i~-igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 156 LLACEKLGLDPEEMLF-VGDSRNDIQAARAAGCPS 189 (226)
T ss_pred HHHHHHcCCChhheEE-ECCCHHHHHHHHHCCCcE
Confidence 3233222222233444 999999999999999975
No 123
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=91.93 E-value=0.35 Score=58.31 Aligned_cols=59 Identities=12% Similarity=0.158 Sum_probs=42.6
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHC-CCeEEEEccChhhhHHHHHHHHH
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKEN-GYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~N-GYkILYLSgRpigqAd~TR~wL~ 775 (912)
..++|++|+||||+..+.. -...-.++.+.++++++.+. |..|+.+|||+.. ..+.|+.
T Consensus 491 ~~rLi~~D~DGTL~~~~~~------~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~---~l~~~~~ 550 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPD------PELAVPDKELRDLLRRLAADPNTDVAIISGRDRD---TLERWFG 550 (726)
T ss_pred cceEEEEecCccccCCCCC------cccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH---HHHHHhC
Confidence 4689999999999973211 11123467899999999994 9999999999854 3344553
No 124
>PLN03017 trehalose-phosphatase
Probab=91.61 E-value=0.39 Score=54.48 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=41.3
Q ss_pred cCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHH
Q 002531 706 KWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLT 770 (912)
Q Consensus 706 ~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~T 770 (912)
+....+|++|+||||+-- .+.-......+...+.+++|+ +|++|..+|||+.......
T Consensus 108 ~~k~~llflD~DGTL~Pi------v~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPI------VDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred cCCCeEEEEecCCcCcCC------cCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHh
Confidence 345677889999999920 111111135678999999998 8899999999998765544
No 125
>PRK11590 hypothetical protein; Provisional
Probab=91.58 E-value=0.53 Score=48.01 Aligned_cols=111 Identities=7% Similarity=0.026 Sum_probs=63.6
Q ss_pred chHHHHHH-HHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHH
Q 002531 739 QSGVAKLF-SAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACL 817 (912)
Q Consensus 739 h~GVAkLy-~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L 817 (912)
.+|+.++. +.+++.||++..+|+.+.......-..|... .+ . .++.+. +-..+..... -+.-+..+-.
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~--~~----~-~~i~t~--l~~~~tg~~~--g~~c~g~~K~ 165 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWL--PR----V-NLIASQ--MQRRYGGWVL--TLRCLGHEKV 165 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccc--cc----C-ceEEEE--EEEEEccEEC--CccCCChHHH
Confidence 35777888 5677889999999999887665554443210 00 0 112211 1000011111 1222333334
Q ss_pred HHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCcee
Q 002531 818 EDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVA 865 (912)
Q Consensus 818 ~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~ 865 (912)
+.|+..++......|| |||..+|.-++..+|-| |.|||..++.
T Consensus 166 ~~l~~~~~~~~~~~~a-Y~Ds~~D~pmL~~a~~~----~~vnp~~~l~ 208 (211)
T PRK11590 166 AQLERKIGTPLRLYSG-YSDSKQDNPLLYFCQHR----WRVTPRGELQ 208 (211)
T ss_pred HHHHHHhCCCcceEEE-ecCCcccHHHHHhCCCC----EEECccHHhh
Confidence 4454444333223344 99999999999999988 7899987764
No 126
>PLN02382 probable sucrose-phosphatase
Probab=91.45 E-value=0.3 Score=55.66 Aligned_cols=54 Identities=17% Similarity=0.168 Sum_probs=36.6
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHH
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLT 770 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~T 770 (912)
.-+|++|+||||..++-- +..+......++.++.++|-.|++.|||+..++...
T Consensus 9 ~~lI~sDLDGTLL~~~~~--------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l 62 (413)
T PLN02382 9 RLMIVSDLDHTMVDHHDP--------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKEL 62 (413)
T ss_pred CEEEEEcCCCcCcCCCCc--------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHH
Confidence 457899999999975200 012223445566778889999999999986555443
No 127
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.38 E-value=0.4 Score=50.05 Aligned_cols=50 Identities=14% Similarity=0.265 Sum_probs=36.4
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCC-CeEEEEccChh
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENG-YQLLFLSARAI 764 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NG-YkILYLSgRpi 764 (912)
..++++|+||||+.. .+.-......+++.++.+.|.+.. ..+.++|||+.
T Consensus 3 ~~~l~lD~DGTL~~~------~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~ 53 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI------VPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKF 53 (244)
T ss_pred cEEEEEecCccccCC------cCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence 468999999999962 111222345688999999997764 56779999965
No 128
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=90.58 E-value=1.9 Score=44.33 Aligned_cols=51 Identities=27% Similarity=0.201 Sum_probs=39.6
Q ss_pred EeecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCC--eEEEEccCh
Q 002531 703 YLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGY--QLLFLSARA 763 (912)
Q Consensus 703 YLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGY--kILYLSgRp 763 (912)
.|-+.+=|+||+|.|.|||. -.++-.++-+++.++++++.+- +|+.+|-.+
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~----------~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTP----------PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred hhhhcCceEEEEcCCCCCCC----------CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 34556779999999999997 2233446778899999998765 599999986
No 129
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=90.31 E-value=0.65 Score=44.97 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhc--ccCcHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVI--RRAPHEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi--~RkPe~FKie 815 (912)
.+||.++++.|+++||++..+|+.... +..|... +. .+ .+..+.+ .++- .++|+.|+..
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~~-----~~~l~~~---~l~~~--------f~~~~~~--~~~~~~kp~p~~~~~~ 150 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKNA-----PTVLEKL---GLIDY--------FDAIVDP--AEIKKGKPDPEIFLAA 150 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCccH-----HHHHHhc---CcHhh--------CcEEEeh--hhcCCCCCChHHHHHH
Confidence 468899999999999999999986422 2344432 11 00 1111111 1111 2334444432
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
...+.-.....+. +||+.+|+.+=+++|+++
T Consensus 151 -----~~~~~~~~~~~v~-vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 151 -----AEGLGVSPSECIG-IEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred -----HHHcCCCHHHeEE-EecCHHHHHHHHHcCCEE
Confidence 2222111112344 899999999999999964
No 130
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=90.28 E-value=0.64 Score=46.39 Aligned_cols=68 Identities=9% Similarity=0.084 Sum_probs=49.8
Q ss_pred CCCeEEEEecCCCcccccccCccCC-------------------C-CCC--CC--CchHHHHHHHHHHHCCCeEEEEccC
Q 002531 707 WNAKIVISDVDGTITKSDVLGQFMP-------------------L-VGK--DW--TQSGVAKLFSAIKENGYQLLFLSAR 762 (912)
Q Consensus 707 ~~~KVVISDIDGTITkSDvlGhilP-------------------~-lGK--DW--th~GVAkLy~~I~~NGYkILYLSgR 762 (912)
....++|.|+|.||..|........ + ++. .+ ..||+.++...+++. |.+...|+-
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~ 82 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMG 82 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCC
Confidence 3567899999999998865422111 0 110 11 278999999999855 999999999
Q ss_pred hhhhHHHHHHHHH
Q 002531 763 AIVQAYLTRSFLL 775 (912)
Q Consensus 763 pigqAd~TR~wL~ 775 (912)
+...|...-++|.
T Consensus 83 ~~~yA~~vl~~ld 95 (156)
T TIGR02250 83 TRAYAQAIAKLID 95 (156)
T ss_pred cHHHHHHHHHHhC
Confidence 9998888877774
No 131
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.17 E-value=0.92 Score=45.41 Aligned_cols=94 Identities=14% Similarity=0.218 Sum_probs=52.7
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.++++||++..+|..+..... .|+.....-...| --++.+. ++-.+|| +.|+. +
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~---~~~~~~~~l~~~f--d~v~~s~---------~~~~~KP~p~~~~~-~ 150 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTT---FWPEEYPEVRAAA--DHIYLSQ---------DLGMRKPEARIYQH-V 150 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhHH---HHHhhchhHHHhc--CEEEEec---------ccCCCCCCHHHHHH-H
Confidence 579999999999999999999998754322 2222110000001 0122221 2223344 44432 2
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+. + ++ .-.+. +||+..|+.+-+++|+..
T Consensus 151 ~~~~~-~-~p--~~~l~-vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 151 LQAEG-F-SA--ADAVF-FDDNADNIEAANALGITS 181 (199)
T ss_pred HHHcC-C-Ch--hHeEE-eCCCHHHHHHHHHcCCEE
Confidence 23222 1 11 12333 799999999999999975
No 132
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=89.00 E-value=1.5 Score=42.01 Aligned_cols=91 Identities=20% Similarity=0.280 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
.+|+.++++.++++||++..+|+.+... .. .+.+. |- .+.+. ++.+ .++..+|| +.|+..
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~---~~~~~---~l~~~f~~-i~~~---------~~~~~~KP~~~~~~~~ 149 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH-AV---LVQEL---GLRDLFDV-VIFS---------GDVGRGKPDPDIYLLA 149 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH-HH---HHHhc---CCHHHCCE-EEEc---------CCCCCCCCCHHHHHHH
Confidence 4788999999999999999999987655 21 22211 10 01111 1111 12223454 334332
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+. -.....+. +||+..|+.+=+++|+..
T Consensus 150 -~~~~~----~~~~~~~~-vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 150 -LKKLG----LKPEECLF-VDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred -HHHcC----CCcceEEE-EcCCHHHHHHHHHcCCEE
Confidence 22221 11223444 899999999999999854
No 133
>PLN02151 trehalose-phosphatase
Probab=88.58 E-value=0.99 Score=51.11 Aligned_cols=56 Identities=11% Similarity=0.177 Sum_probs=41.8
Q ss_pred ecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhH
Q 002531 705 WKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQA 767 (912)
Q Consensus 705 W~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqA 767 (912)
......++++|+||||+- |.+.-..-...+++.+.++.|+ +++++.++|||+....
T Consensus 94 ~~~~~~ll~lDyDGTL~P------Iv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSP------IVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV 149 (354)
T ss_pred hcCCceEEEEecCccCCC------CCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence 444567889999999993 2233333346789999999998 5689999999987544
No 134
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=88.54 E-value=1.5 Score=42.46 Aligned_cols=92 Identities=16% Similarity=0.219 Sum_probs=52.3
Q ss_pred CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 738 TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 738 th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
..+|+.++.+.++++||++..+|++ ...+..|+...- ..+.+. ++.+. .+..+|| +.|..
T Consensus 89 ~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l--~~~f~~-v~~~~---------~~~~~kp~~~~~~~- 150 (185)
T TIGR02009 89 VLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGL--TDYFDA-IVDAD---------EVKEGKPHPETFLL- 150 (185)
T ss_pred CCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcCh--HHHCCE-eeehh---------hCCCCCCChHHHHH-
Confidence 4568999999999999999999988 224445543210 011111 11111 1112344 43432
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+++.+. + ++. . .+. +||+..|+.+=+++|+++
T Consensus 151 ~~~~~~-~-~~~-~-~v~-IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 151 AAELLG-V-SPN-E-CVV-FEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHcC-C-CHH-H-eEE-EeCcHhhHHHHHHCCCeE
Confidence 333332 1 111 2 333 899999999999999963
No 135
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=88.04 E-value=1 Score=46.47 Aligned_cols=112 Identities=24% Similarity=0.344 Sum_probs=65.5
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCC----CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDW----TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNA 783 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDW----th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~ 783 (912)
+-|.+|+|||||||..-.. +.--|.-. +..|.. .+.|...|-++-.+|||.-.....-.+=| |
T Consensus 7 ~IkLli~DVDGvLTDG~ly---~~~~Gee~KaFnv~DG~G--ik~l~~~Gi~vAIITGr~s~ive~Ra~~L------G-- 73 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLY---YDENGEEIKAFNVRDGHG--IKLLLKSGIKVAIITGRDSPIVEKRAKDL------G-- 73 (170)
T ss_pred hceEEEEeccceeecCeEE---EcCCCceeeeeeccCcHH--HHHHHHcCCeEEEEeCCCCHHHHHHHHHc------C--
Confidence 3578999999999984211 11122221 222322 34566889999999999765543322212 1
Q ss_pred CCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 784 LPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 784 LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+ ..+|. ++ .+ |.+++.+|+.-..-...- .|-.||-..|.-+.+++|++.
T Consensus 74 -------I--~~~~q-----G~---~d--K~~a~~~L~~~~~l~~e~-~ayiGDD~~Dlpvm~~vGls~ 122 (170)
T COG1778 74 -------I--KHLYQ-----GI---SD--KLAAFEELLKKLNLDPEE-VAYVGDDLVDLPVMEKVGLSV 122 (170)
T ss_pred -------C--ceeee-----ch---Hh--HHHHHHHHHHHhCCCHHH-hhhhcCccccHHHHHHcCCcc
Confidence 1 11222 11 11 788777776543322222 233688899999999999984
No 136
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=87.78 E-value=1.8 Score=45.65 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=79.0
Q ss_pred CeEEEEecCCCccccccc---C--ccCCC-------------CCCCCCch-----HHHHHHHHHHHCCCeEEEEccChhh
Q 002531 709 AKIVISDVDGTITKSDVL---G--QFMPL-------------VGKDWTQS-----GVAKLFSAIKENGYQLLFLSARAIV 765 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvl---G--hilP~-------------lGKDWth~-----GVAkLy~~I~~NGYkILYLSgRpig 765 (912)
+-.|-||||.|+.-|..- | .+.|- +-+.|... -+.+|..+-...|-+|.|+|||.-+
T Consensus 63 Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~g 142 (237)
T COG3700 63 PIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPG 142 (237)
T ss_pred CeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 456889999999876422 2 12331 34445433 3446666667889999999999999
Q ss_pred hHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHH-HHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHH
Q 002531 766 QAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHE-FKIACLEDIKKLFPSDYNPFYAGFGNRDTDELS 844 (912)
Q Consensus 766 qAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~-FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~a 844 (912)
-.+.+-.-|... -+---+-||.+.-| ..+|.. -|..+|. . .+.-+- |||.++|+.|
T Consensus 143 k~d~vsk~Lak~---F~i~~m~pv~f~Gd-----------k~k~~qy~Kt~~i~---~-----~~~~Ih-YGDSD~Di~A 199 (237)
T COG3700 143 KTDTVSKTLAKN---FHITNMNPVIFAGD-----------KPKPGQYTKTQWIQ---D-----KNIRIH-YGDSDNDITA 199 (237)
T ss_pred cccccchhHHhh---cccCCCcceeeccC-----------CCCcccccccHHHH---h-----cCceEE-ecCCchhhhH
Confidence 888887777653 12222334444322 223332 2443443 2 122233 8999999999
Q ss_pred HHhcCCCCCcEEE
Q 002531 845 YRKIGIPKGKIFI 857 (912)
Q Consensus 845 YRsVGIp~~RIFi 857 (912)
-|.+|+-.-||..
T Consensus 200 AkeaG~RgIRilR 212 (237)
T COG3700 200 AKEAGARGIRILR 212 (237)
T ss_pred HHhcCccceeEEe
Confidence 9999998888854
No 137
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=86.81 E-value=2.2 Score=44.70 Aligned_cols=92 Identities=20% Similarity=0.233 Sum_probs=54.0
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
.+||.+++..|+++||++..+|+.+..... ..|... |. .+-+ .++.+.+ +-..|| +.|...
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~---~~l~~~---gl~~~Fd-~iv~~~~---------~~~~KP~p~~~~~a 173 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENAE---LMISLL---GLSDFFQ-AVIIGSE---------CEHAKPHPDPYLKA 173 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHHH---HHHHHc---CChhhCc-EEEecCc---------CCCCCCChHHHHHH
Confidence 358999999999999999999998765543 444432 10 1111 1222221 112344 333222
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+. -.....+. +||+..|+.+=+++|+++
T Consensus 174 -~~~~~----~~~~~~l~-vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 174 -LEVLK----VSKDHTFV-FEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred -HHHhC----CChhHEEE-EcCCHHHHHHHHHCCCEE
Confidence 22221 11122344 899999999999999985
No 138
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=86.56 E-value=2.3 Score=42.54 Aligned_cols=92 Identities=23% Similarity=0.290 Sum_probs=53.1
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
.+|+.++++.|+++||++..+|+..... .+..|+.+ |. .+-+ .++.+. ++...|| +.|+..
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~~---~l~~~f~-~i~~~~---------~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVK---QWEKLERL---GVRDFFD-AVITSE---------EEGVEKPHPKIFYAA 159 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHhC---ChHHhcc-EEEEec---------cCCCCCCCHHHHHHH
Confidence 3488899999999999999999986432 23334432 11 1111 122221 1222345 333322
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCch-hhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRD-TDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~-tDV~aYRsVGIp~ 852 (912)
++. ++-...-.+. +||+. +|+.+=+++|+.+
T Consensus 160 -~~~----~~~~~~~~~~-igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 160 -LKR----LGVKPEEAVM-VGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred -HHH----cCCChhhEEE-ECCChHHHHHHHHHCCCEE
Confidence 222 2211123444 89997 8999999999987
No 139
>PRK11587 putative phosphatase; Provisional
Probab=86.37 E-value=1.8 Score=44.04 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=53.0
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcH--HHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie~ 816 (912)
.+|+.+++..|+++||++..+|+...... +..|... +...+. .++..+ .+-.+||+ .|...
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~---~~~l~~~---~l~~~~--~i~~~~--------~~~~~KP~p~~~~~~- 147 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVA---SARHKAA---GLPAPE--VFVTAE--------RVKRGKPEPDAYLLG- 147 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHH---HHHHHhc---CCCCcc--EEEEHH--------HhcCCCCCcHHHHHH-
Confidence 46889999999999999999999765432 3333321 222221 122211 22233443 33322
Q ss_pred HHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
++.+ ++=|. . .+. +||+..|+.+=+++|+++
T Consensus 148 ~~~~-g~~p~--~-~l~-igDs~~di~aA~~aG~~~ 178 (218)
T PRK11587 148 AQLL-GLAPQ--E-CVV-VEDAPAGVLSGLAAGCHV 178 (218)
T ss_pred HHHc-CCCcc--c-EEE-EecchhhhHHHHHCCCEE
Confidence 2222 11122 2 333 899999999999999965
No 140
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=85.94 E-value=1.5 Score=47.89 Aligned_cols=55 Identities=16% Similarity=0.315 Sum_probs=44.5
Q ss_pred ecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCC-eEEEEccChhh
Q 002531 705 WKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGY-QLLFLSARAIV 765 (912)
Q Consensus 705 W~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGY-kILYLSgRpig 765 (912)
-+...+.+++|+|||||. +.++--..++-++..++.++|....- .+.++|||+.-
T Consensus 14 ~~a~~~~~~lDyDGTl~~------i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~ 69 (266)
T COG1877 14 LNARKRLLFLDYDGTLTE------IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLA 69 (266)
T ss_pred ccccceEEEEeccccccc------cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHH
Confidence 345678999999999997 46666677888999999999988743 47789999753
No 141
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=85.00 E-value=8.1 Score=42.65 Aligned_cols=130 Identities=17% Similarity=0.199 Sum_probs=69.6
Q ss_pred CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCce-----eeCCCCCCchhhhhhcccCcHHH
Q 002531 738 TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPV-----VISPDGLFPSLFREVIRRAPHEF 812 (912)
Q Consensus 738 th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPv-----LLSPd~Lf~ALrREvi~RkPe~F 812 (912)
..+|+.+|++.++++|+++..+||-.. ..++..|+.. |..-|..++ .+..++.+..+....++. - =
T Consensus 122 l~pG~~efl~~L~~~GIpv~IvS~G~~---~~Ie~vL~~l---gl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~-~--~ 192 (277)
T TIGR01544 122 LKDGYENFFDKLQQHSIPVFIFSAGIG---NVLEEVLRQA---GVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT-F--N 192 (277)
T ss_pred cCcCHHHHHHHHHHCCCcEEEEeCCcH---HHHHHHHHHc---CCCCcCceEEeeeEEECCCCeEeCCCCCcccc-c--c
Confidence 367999999999999999999998544 5555566543 221133333 122333322221111111 0 1
Q ss_pred HHH-HHHHHHHhCC--CCCCcEEEeeCCchhhHHHHHhcCCCC-CcEEEECCCCceeecccccccchhhhhccc
Q 002531 813 KIA-CLEDIKKLFP--SDYNPFYAGFGNRDTDELSYRKIGIPK-GKIFIINPKGEVAISHRIDVKSYTSLHTLV 882 (912)
Q Consensus 813 Kie-~L~dIr~LFP--~~~nPFyAGFGNR~tDV~aYRsVGIp~-~RIFiInpkGel~~~~~~~~kSY~~L~elV 882 (912)
|.+ .+......|. ......++ +||..+|+.| +-|+|. ..|..|+=--+-+ ......|...-|+|
T Consensus 193 K~~~v~~~~~~~~~~~~~~~~vI~-vGDs~~Dl~m--a~g~~~~~~~l~igfln~~~---e~~l~~y~~~~Div 260 (277)
T TIGR01544 193 KNHDVALRNTEYFNQLKDRSNIIL-LGDSQGDLRM--ADGVANVEHILKIGYLNDRV---DELLEKYMDSYDIV 260 (277)
T ss_pred cHHHHHHHHHHHhCccCCcceEEE-ECcChhhhhH--hcCCCcccceEEEEecccCH---HHHHHHHHHhCCEE
Confidence 444 2223333332 12233455 9999999999 668865 5566654311111 11123677776655
No 142
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=84.73 E-value=1.4 Score=46.87 Aligned_cols=119 Identities=20% Similarity=0.265 Sum_probs=76.7
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCC-----CceeeCCCCCCchhh-hhhcccCcHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPN-----GPVVISPDGLFPSLF-REVIRRAPHEF 812 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~-----GPvLLSPd~Lf~ALr-REvi~RkPe~F 812 (912)
-+||.+|++.||++|.++..+||-=..++....+-| ++|. --+++..++-|..|. .+.+.+.- =
T Consensus 90 T~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L--------gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsg--g 159 (227)
T KOG1615|consen 90 TPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL--------GIPKSNIYANELLFDKDGKYLGFDTNEPTSDSG--G 159 (227)
T ss_pred CCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh--------CCcHhhhhhheeeeccCCcccccccCCccccCC--c
Confidence 569999999999999999999998888877777655 3333 234555555443322 11222222 3
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeeccccc-ccchh
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRID-VKSYT 876 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~~~~~-~kSY~ 876 (912)
|.+.+..|+.-++ +.. .+..||..||..|. |+..-| |..-|.++.+.++. .++|.
T Consensus 160 Ka~~i~~lrk~~~--~~~-~~mvGDGatDlea~-----~pa~af-i~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 160 KAEVIALLRKNYN--YKT-IVMVGDGATDLEAM-----PPADAF-IGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred cHHHHHHHHhCCC--hhe-eEEecCCccccccC-----Cchhhh-hccCCceEcHhhHhccHHHH
Confidence 8888888887443 333 44599999999875 444444 45556666555443 35776
No 143
>PLN02580 trehalose-phosphatase
Probab=84.37 E-value=2.3 Score=48.74 Aligned_cols=53 Identities=11% Similarity=0.197 Sum_probs=40.5
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhH
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQA 767 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqA 767 (912)
...++++|.||||+- |.+.-......+++.++++.|+.. +++.++|||+....
T Consensus 118 k~~~LfLDyDGTLaP------Iv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L 170 (384)
T PLN02580 118 KKIALFLDYDGTLSP------IVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKV 170 (384)
T ss_pred CCeEEEEecCCccCC------CCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHH
Confidence 456788899999995 233344445678999999999887 58999999987543
No 144
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=84.04 E-value=1.8 Score=42.32 Aligned_cols=90 Identities=19% Similarity=0.259 Sum_probs=57.8
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHH
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFK 813 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FK 813 (912)
-.|...+++.++.+.|++.|+++..+||.....+...-..| +|+ ....|. ++. .+|+ -|
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l--------gi~-------~~~v~a----~~~-~kP~-~k 182 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL--------GIF-------DSIVFA----RVI-GKPE-PK 182 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT--------TSC-------SEEEEE----SHE-TTTH-HH
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeecccccccccccccc--------ccc-------cccccc----ccc-cccc-ch
Confidence 34567889999999999999999999998776665555433 221 100111 111 3453 24
Q ss_pred --HHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcC
Q 002531 814 --IACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIG 849 (912)
Q Consensus 814 --ie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVG 849 (912)
..+++.++. .+ .. .+.+||..+|+.|-+++|
T Consensus 183 ~~~~~i~~l~~--~~--~~-v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQV--KP--GE-VAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHTC--TG--GG-EEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHHhc--CC--CE-EEEEccCHHHHHHHHhCc
Confidence 445555541 12 23 344899999999999876
No 145
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=83.76 E-value=3 Score=44.00 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=53.5
Q ss_pred CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHH
Q 002531 738 TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIA 815 (912)
Q Consensus 738 th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie 815 (912)
..+|+.++++.|+++||++..+|+.+..........+.. ..|. +. .+..|. ..+.+|| +.|..
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~-----~~L~--~~---f~~~fd----~~~g~KP~p~~y~~- 160 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDA-----GNLT--PY---FSGYFD----TTVGLKTEAQSYVK- 160 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccc-----cchh--hh---cceEEE----eCcccCCCHHHHHH-
Confidence 356899999999999999999998766543332222100 0110 00 112222 1123344 33322
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+++++. + ++. . .+. +||+..|+.+=+++|+.+
T Consensus 161 i~~~lg-v-~p~-e-~lf-VgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 161 IAGQLG-S-PPR-E-ILF-LSDIINELDAARKAGLHT 192 (220)
T ss_pred HHHHhC-c-Chh-H-EEE-EeCCHHHHHHHHHcCCEE
Confidence 233332 1 121 2 334 789999999999999975
No 146
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=83.71 E-value=1.5 Score=45.35 Aligned_cols=48 Identities=17% Similarity=0.235 Sum_probs=29.5
Q ss_pred EEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCC-eEEEEccChhhh
Q 002531 713 ISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGY-QLLFLSARAIVQ 766 (912)
Q Consensus 713 ISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGY-kILYLSgRpigq 766 (912)
.+|+||||+.- .+.-......+++.+++++|.+... .+..+|||+...
T Consensus 1 ~lDyDGTL~p~------~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~ 49 (235)
T PF02358_consen 1 FLDYDGTLAPI------VDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD 49 (235)
T ss_dssp EEE-TTTSS---------S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH
T ss_pred CcccCCccCCC------CCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH
Confidence 47999999962 2333344568899999999988754 788999998876
No 147
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=83.44 E-value=2.3 Score=53.09 Aligned_cols=57 Identities=14% Similarity=0.307 Sum_probs=42.4
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHH-HHCCCeEEEEccChhhhHHHHHHHHH
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAI-KENGYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I-~~NGYkILYLSgRpigqAd~TR~wL~ 775 (912)
..+++++|+||||+..... ...+.+++.+++++| ++.|..|..+|||+.. ..+.|+.
T Consensus 595 ~~rlI~LDyDGTLlp~~~~--------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~---~L~~~f~ 652 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASI--------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRK---TLADWFS 652 (854)
T ss_pred cCeEEEEecCCcccCCccc--------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHH---HHHHHhC
Confidence 5789999999999964211 113457899999998 6779999999999764 3555554
No 148
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=83.41 E-value=6.4 Score=46.60 Aligned_cols=104 Identities=17% Similarity=0.232 Sum_probs=68.8
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP 788 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP 788 (912)
..+|..+.||++.-- +.=+|-..+|+.++++.++++||++..+|+.....+....+.| +++
T Consensus 385 ~~~~~~~~~~~~~g~--------~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l--------gi~--- 445 (562)
T TIGR01511 385 STSVLVAVNGELAGV--------FALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL--------GIN--- 445 (562)
T ss_pred CEEEEEEECCEEEEE--------EEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc--------CCc---
Confidence 456677778876541 1123556899999999999999999999998875444433322 221
Q ss_pred eeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 789 VVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 789 vLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.|. +. .| .=|.+.++.++. . .... +-+||..+|+.+.+++|+.
T Consensus 446 -------~~~----~~---~p-~~K~~~v~~l~~---~-~~~v-~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 446 -------VRA----EV---LP-DDKAALIKELQE---K-GRVV-AMVGDGINDAPALAQADVG 488 (562)
T ss_pred -------EEc----cC---Ch-HHHHHHHHHHHH---c-CCEE-EEEeCCCccHHHHhhCCEE
Confidence 111 11 12 137777777775 2 2333 3489999999999999874
No 149
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=83.09 E-value=5.9 Score=46.63 Aligned_cols=103 Identities=20% Similarity=0.314 Sum_probs=67.5
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCC-CeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENG-YQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP 788 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NG-YkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP 788 (912)
.++.+..||++..- +.-+|-..+|+.++.+.++++| |++..+|+.+...+... ++.+ ++
T Consensus 365 ~~~~v~~~~~~~g~--------i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i---~~~l-----gi---- 424 (556)
T TIGR01525 365 TVVFVAVDGELLGV--------IALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAV---AAEL-----GI---- 424 (556)
T ss_pred EEEEEEECCEEEEE--------EEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHH---HHHh-----CC----
Confidence 44555566654431 1344667899999999999999 99999999887654443 4332 11
Q ss_pred eeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 789 VVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 789 vLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
+..|... .| .=|.+.+++++. .+ . -.+-+||+.+|+.+.++.|+
T Consensus 425 -----~~~f~~~-------~p-~~K~~~v~~l~~---~~-~-~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 425 -----DEVHAEL-------LP-EDKLAIVKELQE---EG-G-VVAMVGDGINDAPALAAADV 468 (556)
T ss_pred -----CeeeccC-------CH-HHHHHHHHHHHH---cC-C-EEEEEECChhHHHHHhhCCE
Confidence 1222211 11 236778888875 12 2 34458999999999999985
No 150
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=82.58 E-value=3.9 Score=44.54 Aligned_cols=47 Identities=19% Similarity=0.437 Sum_probs=37.0
Q ss_pred CCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhh
Q 002531 707 WNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIV 765 (912)
Q Consensus 707 ~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpig 765 (912)
+...+|-.||||||.. -+-+| ..++..|..+++.||+||+||+...-
T Consensus 5 ~~~~lIFtDlD~TLl~----------~~ye~--~pA~pv~~el~d~G~~Vi~~SSKT~a 51 (274)
T COG3769 5 QMPLLIFTDLDGTLLP----------HSYEW--QPAAPVLLELKDAGVPVILCSSKTRA 51 (274)
T ss_pred ccceEEEEcccCcccC----------CCCCC--CccchHHHHHHHcCCeEEEeccchHH
Confidence 3567888999999976 13345 34678899999999999999997654
No 151
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=81.15 E-value=2 Score=43.04 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=14.1
Q ss_pred CeEEEEecCCCccccc
Q 002531 709 AKIVISDVDGTITKSD 724 (912)
Q Consensus 709 ~KVVISDIDGTITkSD 724 (912)
-++||||+||||..+.
T Consensus 2 ~~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTS 17 (221)
T ss_pred ceEEEEeCCCCCcCCC
Confidence 3789999999999875
No 152
>PTZ00445 p36-lilke protein; Provisional
Probab=80.52 E-value=15 Score=39.57 Aligned_cols=147 Identities=12% Similarity=-0.009 Sum_probs=84.7
Q ss_pred eecCCCeEEEEecCCCcccccccCccCCC-CCCCC---CchHHHHHHHHHHHCCCeEEEEccChhh------------hH
Q 002531 704 LWKWNAKIVISDVDGTITKSDVLGQFMPL-VGKDW---TQSGVAKLFSAIKENGYQLLFLSARAIV------------QA 767 (912)
Q Consensus 704 LW~~~~KVVISDIDGTITkSDvlGhilP~-lGKDW---th~GVAkLy~~I~~NGYkILYLSgRpig------------qA 767 (912)
|...+=|+|++|+|-||..-+..|-.-|. -+.+. ..+..-.+..++++.|.+|+.+|=.+.. -.
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~ 117 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGD 117 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechH
Confidence 44567799999999998875555544453 11111 2445778999999999999999866553 35
Q ss_pred HHHHHHHHhhhhCCCCCCCCceeeCCCCCCc---hhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHH
Q 002531 768 YLTRSFLLNLKQDGNALPNGPVVISPDGLFP---SLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELS 844 (912)
Q Consensus 768 d~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~---ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~a 844 (912)
++.+.-|+.-+ +.+----+..-+-+.|. -.++....+....+|.--|+.+..-+.-...-.+. |+|+..-+.+
T Consensus 118 ~li~~~lk~s~---~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~NVea 193 (219)
T PTZ00445 118 RMVEAALKKSK---CDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMNNCKN 193 (219)
T ss_pred HHHHHHHHhcC---ccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHHHHHH
Confidence 57777776321 11100001100111110 11233444433345544455555444333334555 8999999999
Q ss_pred HHhcCCCCCc
Q 002531 845 YRKIGIPKGK 854 (912)
Q Consensus 845 YRsVGIp~~R 854 (912)
-+++|+....
T Consensus 194 A~~lGi~ai~ 203 (219)
T PTZ00445 194 ALKEGYIALH 203 (219)
T ss_pred HHHCCCEEEE
Confidence 9999987643
No 153
>PRK11590 hypothetical protein; Provisional
Probab=80.03 E-value=0.91 Score=46.33 Aligned_cols=19 Identities=32% Similarity=0.711 Sum_probs=15.5
Q ss_pred CCeEEEEecCCCccccccc
Q 002531 708 NAKIVISDVDGTITKSDVL 726 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvl 726 (912)
..|+||||+||||+..|..
T Consensus 5 ~~k~~iFD~DGTL~~~d~~ 23 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMF 23 (211)
T ss_pred cceEEEEecCCCCcccchH
Confidence 3579999999999976644
No 154
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=79.25 E-value=1.7 Score=45.98 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=22.3
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
.||.-++|..+++++-+|+.+|| ||-...+.-|.++
T Consensus 75 dp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~i 110 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGI 110 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhh
Confidence 45666667777777777777776 4444455555444
No 155
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=79.02 E-value=7.3 Score=40.11 Aligned_cols=65 Identities=22% Similarity=0.279 Sum_probs=42.6
Q ss_pred EEEEecCCCcccccccCc---cCCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhh
Q 002531 711 IVISDVDGTITKSDVLGQ---FMPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLK 778 (912)
Q Consensus 711 VVISDIDGTITkSDvlGh---ilP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~ 778 (912)
..+-|.+|+++.+|..|. ++=..-.+|+ .+..++++..+++.|.+||-+|.-+. ...++|+..+.
T Consensus 8 F~~~~~~g~~~l~d~~g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~---~~~~~~~~~i~ 81 (203)
T cd03016 8 FEADTTHGPIKFHDYLGDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSV---ESHIKWIEDIE 81 (203)
T ss_pred eEEecCCCcEeHHHHcCCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHhhHH
Confidence 344566777777766662 1212445564 44788999999999999999987653 34455766553
No 156
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=78.71 E-value=9.9 Score=37.92 Aligned_cols=93 Identities=14% Similarity=0.236 Sum_probs=51.9
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCc--HHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAP--HEFKIAC 816 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkP--e~FKie~ 816 (912)
.+|+.++++.++++ |++..+|+............+... .+-+ -++.+. ++..+|| +.|.. +
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~-----~~fd-~i~~~~---------~~~~~KP~~~~~~~-~ 161 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF-----PFFD-DIFVSE---------DAGIQKPDKEIFNY-A 161 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH-----hhcC-EEEEcC---------ccCCCCCCHHHHHH-H
Confidence 56888999999999 999999997654443332221100 0111 112111 1222344 33442 2
Q ss_pred HHHHHHhCCCCCCcEEEeeCCch-hhHHHHHhcCCCC
Q 002531 817 LEDIKKLFPSDYNPFYAGFGNRD-TDELSYRKIGIPK 852 (912)
Q Consensus 817 L~dIr~LFP~~~nPFyAGFGNR~-tDV~aYRsVGIp~ 852 (912)
++.+.++ .+. ..+. +||+. .|+.+-+++|++.
T Consensus 162 ~~~~~~~-~~~--~~v~-igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 162 LERMPKF-SKE--EVLM-IGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred HHHhcCC-Cch--heEE-ECCCcHHHHHHHHHCCCcE
Confidence 2222121 121 2344 79987 7999999999986
No 157
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=78.48 E-value=5.8 Score=39.79 Aligned_cols=27 Identities=4% Similarity=0.219 Sum_probs=23.6
Q ss_pred CchHHHHHHHHHHHCCCeEEEEccChh
Q 002531 738 TQSGVAKLFSAIKENGYQLLFLSARAI 764 (912)
Q Consensus 738 th~GVAkLy~~I~~NGYkILYLSgRpi 764 (912)
..+|+.++++.|+++||++..+|....
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 368999999999999999999998643
No 158
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=76.90 E-value=22 Score=38.17 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=62.1
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLE 818 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~ 818 (912)
.+|+.+|++.|+.+|-++=.+|++.-..+++--.|+..+-. .|..= ++. .+--. .+ -..+|+.|=++ .+
T Consensus 94 ~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~---~f~~~-v~~-d~~~v---~~--gKP~Pdi~l~A-~~ 162 (222)
T KOG2914|consen 94 MPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK---NFSHV-VLG-DDPEV---KN--GKPDPDIYLKA-AK 162 (222)
T ss_pred CCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH---hcCCC-eec-CCccc---cC--CCCCchHHHHH-HH
Confidence 55999999999999999999999988887777777775422 12211 111 11101 11 13345554332 22
Q ss_pred HHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 819 DIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 819 dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
.+. ...--....|.|...-+.|=+++|.++
T Consensus 163 ~l~----~~~~~k~lVfeds~~Gv~aa~aagm~v 192 (222)
T KOG2914|consen 163 RLG----VPPPSKCLVFEDSPVGVQAAKAAGMQV 192 (222)
T ss_pred hcC----CCCccceEEECCCHHHHHHHHhcCCeE
Confidence 222 211123556999999999999999876
No 159
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=76.31 E-value=23 Score=37.58 Aligned_cols=100 Identities=17% Similarity=0.293 Sum_probs=69.3
Q ss_pred CCCCCchHHHHHHHH-HHHCCCeEEEEccChh-hhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHH
Q 002531 734 GKDWTQSGVAKLFSA-IKENGYQLLFLSARAI-VQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHE 811 (912)
Q Consensus 734 GKDWth~GVAkLy~~-I~~NGYkILYLSgRpi-gqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~ 811 (912)
-++|=+..|++|++. +++..---|.||||.. ..+...+.-|.. .+|----|.|.|.. ......-.
T Consensus 51 w~gwWNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s-----~~L~Fd~v~LKp~~--------~~~~sTm~ 117 (197)
T PF10307_consen 51 WEGWWNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLAS-----KGLEFDAVCLKPEN--------QRFSSTMD 117 (197)
T ss_pred ccchhhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhc-----CCCCccEEEeCccc--------ccCccccH
Confidence 345667888888876 4455566789999995 787777777653 34444444444430 11123345
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc
Q 002531 812 FKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI 848 (912)
Q Consensus 812 FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV 848 (912)
||..||.++...|+. -.-+.. |+||..-+..+|..
T Consensus 118 fK~~~l~~ll~~Y~~-~~eI~I-YeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 118 FKQAFLEDLLHTYKN-AEEIRI-YEDRPKHVKGFRDF 152 (197)
T ss_pred HHHHHHHHHHHhcCC-CCEEEE-EcCCHHHHHHHHHH
Confidence 999999999998874 345666 99999999999985
No 160
>PLN02811 hydrolase
Probab=75.54 E-value=12 Score=38.19 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=52.9
Q ss_pred CchHHHHHHHHHHHCCCeEEEEccChhhhHH-HHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccC--cHHHHH
Q 002531 738 TQSGVAKLFSAIKENGYQLLFLSARAIVQAY-LTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRA--PHEFKI 814 (912)
Q Consensus 738 th~GVAkLy~~I~~NGYkILYLSgRpigqAd-~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~Rk--Pe~FKi 814 (912)
..+||.++++.|+++||++..+|+....... .+..++. + ..+.+. ++..+ ..++-..| |+.|..
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~-l----~~~f~~--i~~~~------~~~~~~~KP~p~~~~~ 145 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGE-L----FSLMHH--VVTGD------DPEVKQGKPAPDIFLA 145 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHH-H----HhhCCE--EEECC------hhhccCCCCCcHHHHH
Confidence 3589999999999999999999987543221 1211110 0 011111 22222 00122223 443433
Q ss_pred HHHHHHH--HhCCCCCCcEEEeeCCchhhHHHHHhcCCCC
Q 002531 815 ACLEDIK--KLFPSDYNPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 815 e~L~dIr--~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+++++. . +.+. -.+. +||+..|+.+=+++|+++
T Consensus 146 -a~~~~~~~~-~~~~--~~v~-IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 146 -AARRFEDGP-VDPG--KVLV-FEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred -HHHHhCCCC-CCcc--ceEE-EeccHhhHHHHHHCCCeE
Confidence 223221 1 2121 2333 899999999999999975
No 161
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=75.52 E-value=1.5 Score=42.49 Aligned_cols=15 Identities=47% Similarity=0.674 Sum_probs=13.7
Q ss_pred eEEEEecCCCccccc
Q 002531 710 KIVISDVDGTITKSD 724 (912)
Q Consensus 710 KVVISDIDGTITkSD 724 (912)
++||||+||||..+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 689999999999975
No 162
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=75.48 E-value=1.5 Score=44.05 Aligned_cols=16 Identities=31% Similarity=0.621 Sum_probs=14.1
Q ss_pred CeEEEEecCCCccccc
Q 002531 709 AKIVISDVDGTITKSD 724 (912)
Q Consensus 709 ~KVVISDIDGTITkSD 724 (912)
-++||||+||||..|.
T Consensus 3 ~~~viFD~DGTL~ds~ 18 (214)
T PRK13288 3 INTVLFDLDGTLINTN 18 (214)
T ss_pred ccEEEEeCCCcCccCH
Confidence 4789999999999874
No 163
>PRK11587 putative phosphatase; Provisional
Probab=75.43 E-value=1.5 Score=44.52 Aligned_cols=15 Identities=40% Similarity=0.459 Sum_probs=13.7
Q ss_pred eEEEEecCCCccccc
Q 002531 710 KIVISDVDGTITKSD 724 (912)
Q Consensus 710 KVVISDIDGTITkSD 724 (912)
|.||||+||||..|.
T Consensus 4 k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 4 KGFLFDLDGTLVDSL 18 (218)
T ss_pred CEEEEcCCCCcCcCH
Confidence 789999999999984
No 164
>PRK10671 copA copper exporting ATPase; Provisional
Probab=74.77 E-value=13 Score=46.12 Aligned_cols=86 Identities=14% Similarity=0.206 Sum_probs=60.3
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHH
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKI 814 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKi 814 (912)
.|-.++|+.++.+.+++.||+++.+|+.....+....+-| +++ ..+..+ .|+ -|.
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l--------gi~---------~~~~~~-------~p~-~K~ 702 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA--------GID---------EVIAGV-------LPD-GKA 702 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc--------CCC---------EEEeCC-------CHH-HHH
Confidence 5667899999999999999999999998776554433322 222 111111 233 388
Q ss_pred HHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 815 ACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 815 e~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
+++++++.. .... +.+||..+|+.+.+++|+
T Consensus 703 ~~i~~l~~~----~~~v-~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 703 EAIKRLQSQ----GRQV-AMVGDGINDAPALAQADV 733 (834)
T ss_pred HHHHHHhhc----CCEE-EEEeCCHHHHHHHHhCCe
Confidence 888888752 2233 449999999999999987
No 165
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.83 E-value=1.4 Score=43.89 Aligned_cols=15 Identities=20% Similarity=0.539 Sum_probs=13.1
Q ss_pred eEEEEecCCCccccc
Q 002531 710 KIVISDVDGTITKSD 724 (912)
Q Consensus 710 KVVISDIDGTITkSD 724 (912)
++||||+||||..|.
T Consensus 1 ~~viFD~DGTLiDs~ 15 (197)
T TIGR01548 1 QALVLDMDGVMADVS 15 (197)
T ss_pred CceEEecCceEEech
Confidence 469999999999875
No 166
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=73.14 E-value=1.8 Score=43.34 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=13.7
Q ss_pred CeEEEEecCCCccccc
Q 002531 709 AKIVISDVDGTITKSD 724 (912)
Q Consensus 709 ~KVVISDIDGTITkSD 724 (912)
-++||||+||||+.+.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 3689999999999763
No 167
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=72.10 E-value=17 Score=45.75 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=65.1
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCce---eeCCCCCCchhh---------
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPV---VISPDGLFPSLF--------- 801 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPv---LLSPd~Lf~ALr--------- 801 (912)
=+|..++++.+..+.+++.|.+++.+||....-+..+..-+. ..-+...+ .++... +..+.
T Consensus 534 ~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~g------i~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~ 606 (917)
T TIGR01116 534 MLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIG------IFSPDEDVTFKSFTGRE-FDEMGPAKQRAACR 606 (917)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcC------CCCCCccccceeeeHHH-HhhCCHHHHHHhhh
Confidence 358889999999999999999999999987655554443331 11111111 111000 00000
Q ss_pred -hhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 802 -REVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 802 -REvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
--+..|--..-|..+++.++. .+ -..+..||..+|+.|.++++|
T Consensus 607 ~~~v~ar~~P~~K~~iV~~lq~---~g--~~va~iGDG~ND~~alk~AdV 651 (917)
T TIGR01116 607 SAVLFSRVEPSHKSELVELLQE---QG--EIVAMTGDGVNDAPALKKADI 651 (917)
T ss_pred cCeEEEecCHHHHHHHHHHHHh---cC--CeEEEecCCcchHHHHHhCCe
Confidence 012333334468888887775 22 245669999999999999766
No 168
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=72.01 E-value=13 Score=43.66 Aligned_cols=87 Identities=18% Similarity=0.324 Sum_probs=59.6
Q ss_pred CCCCCchHHHHHHHHHHHCCC-eEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHH
Q 002531 734 GKDWTQSGVAKLFSAIKENGY-QLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEF 812 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGY-kILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~F 812 (912)
-+|-..+|+.++.+.+++.|+ ++..+|+.+... ++..++.+ ++ +..|. . . .| .=
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~---a~~i~~~l-----gi---------~~~f~----~-~--~p-~~ 413 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAV---AERVAREL-----GI---------DEVHA----E-L--LP-ED 413 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHH---HHHHHHHc-----CC---------hhhhh----c-c--Cc-HH
Confidence 446678999999999999999 999999986644 44445433 11 11221 1 0 12 13
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
|.+.+++++. .... .+-+||..+|+.+.+++|+
T Consensus 414 K~~~i~~l~~----~~~~-v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 414 KLEIVKELRE----KYGP-VAMVGDGINDAPALAAADV 446 (536)
T ss_pred HHHHHHHHHh----cCCE-EEEEeCCHHHHHHHHhCCE
Confidence 7778888775 2233 3448999999999999986
No 169
>PRK13190 putative peroxiredoxin; Provisional
Probab=71.90 E-value=11 Score=38.96 Aligned_cols=61 Identities=23% Similarity=0.350 Sum_probs=38.0
Q ss_pred ecCCCcccccccCcc--CCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhh
Q 002531 715 DVDGTITKSDVLGQF--MPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLK 778 (912)
Q Consensus 715 DIDGTITkSDvlGhi--lP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~ 778 (912)
|.+|+++.++..|.. +=+.-.+|+ .+..++++..++++|..||-+|.-+. ..-++|++.+.
T Consensus 15 ~~~g~v~l~d~~gk~vvL~~~p~~~cp~C~~El~~l~~~~~~f~~~~~~vi~vS~D~~---~~~~~w~~~~~ 83 (202)
T PRK13190 15 TTKGPIDLSKYKGKWVLLFSHPADFTPVCTTEFIAFSRRYEDFKKLGVELVGLSVDSI---YSHIAWLRDIE 83 (202)
T ss_pred cCCCcEeHHHhCCCEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHhHH
Confidence 455666666655531 112344554 44778899999999999999987543 23346666543
No 170
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=71.84 E-value=1.7 Score=42.03 Aligned_cols=14 Identities=50% Similarity=0.710 Sum_probs=12.4
Q ss_pred EEEEecCCCccccc
Q 002531 711 IVISDVDGTITKSD 724 (912)
Q Consensus 711 VVISDIDGTITkSD 724 (912)
+||||+||||+.+.
T Consensus 1 ~iiFD~DGTL~ds~ 14 (185)
T TIGR01990 1 AVIFDLDGVITDTA 14 (185)
T ss_pred CeEEcCCCccccCh
Confidence 48999999999874
No 171
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=71.19 E-value=8.9 Score=40.90 Aligned_cols=135 Identities=19% Similarity=0.314 Sum_probs=79.2
Q ss_pred CeEEEEecCCCccc-ccccCccCCC--------CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhh
Q 002531 709 AKIVISDVDGTITK-SDVLGQFMPL--------VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQ 779 (912)
Q Consensus 709 ~KVVISDIDGTITk-SDvlGhilP~--------lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q 779 (912)
.|.+.-||.||+.- |=+.--++|| +.++|-++.|.+.+..+..- ++++........-.|.|+.+
T Consensus 4 ~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e-------~g~~~s~E~lva~~~~wiae 76 (229)
T COG4229 4 VKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSE-------FGIANSEEALVALLLEWIAE 76 (229)
T ss_pred hhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHH-------hCccchHHHHHHHHHHHHhc
Confidence 37789999999984 2222345776 78888888888877776432 34555544455555566533
Q ss_pred CCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHh-CCCCC------CcEEEeeCCchhhHHHHHhcCCCC
Q 002531 780 DGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKL-FPSDY------NPFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 780 ~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~L-FP~~~------nPFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
+ +|...+| .++.. +..+| .++| -|...-+..|++.|++
T Consensus 77 d--------------------------~K~t~lK-----~lQG~iWa~Gy~sgelkahly---pDav~~ik~wk~~g~~- 121 (229)
T COG4229 77 D--------------------------SKDTPLK-----ALQGMIWAHGYESGELKAHLY---PDAVQAIKRWKALGMR- 121 (229)
T ss_pred c--------------------------cccchHH-----HHHhHHHHhccccCccccccC---HhHHHHHHHHHHcCCc-
Confidence 2 1222222 22210 00111 2444 4888889999999996
Q ss_pred CcEEEECCCCcee-ecccccccchhhhhccccccCCC
Q 002531 853 GKIFIINPKGEVA-ISHRIDVKSYTSLHTLVNDMFPP 888 (912)
Q Consensus 853 ~RIFiInpkGel~-~~~~~~~kSY~~L~elVd~~FPp 888 (912)
+|+... |-|. +.+-.++.-|..|..+++.+|=-
T Consensus 122 --vyiYSS-GSV~AQkL~Fghs~agdL~~lfsGyfDt 155 (229)
T COG4229 122 --VYIYSS-GSVKAQKLFFGHSDAGDLNSLFSGYFDT 155 (229)
T ss_pred --EEEEcC-CCchhHHHhhcccccccHHhhhcceeec
Confidence 455444 5554 44433345666777777777754
No 172
>PRK09449 dUMP phosphatase; Provisional
Probab=70.41 E-value=24 Score=35.72 Aligned_cols=92 Identities=21% Similarity=0.222 Sum_probs=50.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCC-CCCCCceeeCCCCCCchhhhhhcccCcH--HHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGN-ALPNGPVVISPDGLFPSLFREVIRRAPH--EFKIA 815 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~-~LP~GPvLLSPd~Lf~ALrREvi~RkPe--~FKie 815 (912)
.+|+.++++.|+ +||++..+|..... .++..|... |- .+-+ .++.+ .++-.+||+ .|..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~~---~~~~~l~~~---~l~~~fd-~v~~~---------~~~~~~KP~p~~~~~- 158 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGFTE---LQQVRLERT---GLRDYFD-LLVIS---------EQVGVAKPDVAIFDY- 158 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCcHH---HHHHHHHhC---ChHHHcC-EEEEE---------CccCCCCCCHHHHHH-
Confidence 568999999998 68999999986543 333344332 10 0011 12221 122234554 2222
Q ss_pred HHHHHHHhCCCCCCcEEEeeCCch-hhHHHHHhcCCCC
Q 002531 816 CLEDIKKLFPSDYNPFYAGFGNRD-TDELSYRKIGIPK 852 (912)
Q Consensus 816 ~L~dIr~LFP~~~nPFyAGFGNR~-tDV~aYRsVGIp~ 852 (912)
+++.+. +.|+. . .+. +||+. +|+.+=+++|+..
T Consensus 159 ~~~~~~-~~~~~-~-~~~-vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 159 ALEQMG-NPDRS-R-VLM-VGDNLHSDILGGINAGIDT 192 (224)
T ss_pred HHHHcC-CCCcc-c-EEE-EcCCcHHHHHHHHHCCCcE
Confidence 222221 11221 2 333 78997 6999999999975
No 173
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=70.36 E-value=2.3 Score=44.48 Aligned_cols=16 Identities=50% Similarity=0.713 Sum_probs=14.2
Q ss_pred CeEEEEecCCCccccc
Q 002531 709 AKIVISDVDGTITKSD 724 (912)
Q Consensus 709 ~KVVISDIDGTITkSD 724 (912)
-+.||||+||||..|.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3789999999999985
No 174
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=70.21 E-value=6.9 Score=42.70 Aligned_cols=51 Identities=10% Similarity=0.185 Sum_probs=36.8
Q ss_pred eCCchhhHHHHHhcCCCCCcEEEECCCCceeecccccccchhhhhccccccCCC
Q 002531 835 FGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDVKSYTSLHTLVNDMFPP 888 (912)
Q Consensus 835 FGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~~~~~~kSY~~L~elVd~~FPp 888 (912)
|-|-..-+..|+..|| +||+.++.....+-+.-++..+..|.+.++.+|=-
T Consensus 125 ~aDv~~a~e~w~~~g~---~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt 175 (254)
T KOG2630|consen 125 YADVLPAIERWSGEGV---RVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT 175 (254)
T ss_pred cchhHHHHHHHhhcCc---eEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc
Confidence 3388888999999999 99999886665555544445666677666666643
No 175
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=68.49 E-value=19 Score=45.81 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=68.6
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc------------------------e
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP------------------------V 789 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP------------------------v 789 (912)
=.|..+++|.+..++++++|.+++.+|||....+..+..=+. -++.|. +
T Consensus 565 i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g-------i~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 637 (997)
T TIGR01106 565 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG-------IISEGNETVEDIAARLNIPVSQVNPRDAKAC 637 (997)
T ss_pred ccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC-------CCCCCccchhhhhhhccccccccccccccce
Confidence 358889999999999999999999999999876654433221 111110 1
Q ss_pred eeCCCCC--------Cchhhh---hhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 790 VISPDGL--------FPSLFR---EVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 790 LLSPd~L--------f~ALrR---Evi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
.+.-..+ -..+.+ -+..|---+-|....+.++. .++ ..+..||..+|+-|.+++ ||..
T Consensus 638 vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~---~g~--vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 638 VVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQR---QGA--IVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred EEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHH---CCC--EEEEECCCcccHHHHhhCCcceec
Confidence 1111110 000000 14455444568888888886 232 567899999999999984 7743
No 176
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=67.47 E-value=3.1 Score=40.88 Aligned_cols=18 Identities=11% Similarity=0.362 Sum_probs=14.7
Q ss_pred eCCchhhHHHHHhcCCCC
Q 002531 835 FGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 835 FGNR~tDV~aYRsVGIp~ 852 (912)
+||+..|+.+=+++|+..
T Consensus 164 vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 164 FDDSARNIAAAKALGMKT 181 (184)
T ss_pred EeCCHHHHHHHHHcCCEE
Confidence 788888888888888864
No 177
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=67.00 E-value=2.9 Score=41.67 Aligned_cols=16 Identities=31% Similarity=0.410 Sum_probs=14.0
Q ss_pred eEEEEecCCCcccccc
Q 002531 710 KIVISDVDGTITKSDV 725 (912)
Q Consensus 710 KVVISDIDGTITkSDv 725 (912)
|+||||+||||..+..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 6899999999998754
No 178
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=66.11 E-value=15 Score=38.63 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=46.6
Q ss_pred cCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHH
Q 002531 706 KWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFL 774 (912)
Q Consensus 706 ~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL 774 (912)
..+.|.+|-|||+||..+-.... -+.-..+||+-++++.+.+ .|.|+.-||.....++..-.-|
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~----~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAE----TGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCC----CceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHh
Confidence 34678999999999996421111 2233568999999999988 7999999998766666555444
No 179
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=64.45 E-value=15 Score=46.69 Aligned_cols=63 Identities=13% Similarity=0.112 Sum_probs=42.5
Q ss_pred CCeEEEEecCCCccccccc-----CccCCCCCCCCCchHHHHHHHHHHHC-CCeEEEEccChhhhHHHHHHHHH
Q 002531 708 NAKIVISDVDGTITKSDVL-----GQFMPLVGKDWTQSGVAKLFSAIKEN-GYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvl-----GhilP~lGKDWth~GVAkLy~~I~~N-GYkILYLSgRpigqAd~TR~wL~ 775 (912)
..+++++|.||||+-.... .++.++ .-.+++++.++++.|.+. +..+..+|||+... ...||.
T Consensus 590 ~~RLlfLDyDGTLap~~~~P~~~~~~~~~~--~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~---Le~~fg 658 (934)
T PLN03064 590 NNRLLILGFNATLTEPVDTPGRRGDQIKEM--ELRLHPELKEPLRALCSDPKTTIVVLSGSDRSV---LDENFG 658 (934)
T ss_pred cceEEEEecCceeccCCCCccccccccccc--ccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHH---HHHHhC
Confidence 4578999999999952111 011111 233678999999999875 68899999998743 445553
No 180
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=64.13 E-value=16 Score=45.57 Aligned_cols=62 Identities=15% Similarity=0.096 Sum_probs=41.7
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHC-CCeEEEEccChhhhHHHHHHHHH
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKEN-GYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~N-GYkILYLSgRpigqAd~TR~wL~ 775 (912)
..+++++|.||||+-.... ..-| ..-.+.+++.++.++|.+. +..+..+|||+.. ....||.
T Consensus 506 ~~rll~LDyDGTL~~~~~~-~~~p--~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~---~L~~~~~ 568 (797)
T PLN03063 506 NNRLLILGFYGTLTEPRNS-QIKE--MDLGLHPELKETLKALCSDPKTTVVVLSRSGKD---ILDKNFG 568 (797)
T ss_pred cCeEEEEecCccccCCCCC-cccc--ccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHH---HHHHHhC
Confidence 3578999999999942100 0011 1124578999999999865 6789999999764 3455663
No 181
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=63.84 E-value=33 Score=36.77 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=28.7
Q ss_pred cCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccCh
Q 002531 706 KWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARA 763 (912)
Q Consensus 706 ~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRp 763 (912)
+....+||...|.+++ .+|+.++++.++++|+ ++.+|..+
T Consensus 129 ~~~~~~Vvv~~d~~~~-----------------y~~i~~~l~~L~~~g~-~~i~Tn~d 168 (279)
T TIGR01452 129 EENVGAVVVGYDEHFS-----------------YAKLREACAHLREPGC-LFVATNRD 168 (279)
T ss_pred CCCCCEEEEecCCCCC-----------------HHHHHHHHHHHhcCCC-EEEEeCCC
Confidence 3456677776665443 4899999999998898 55677655
No 182
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=63.12 E-value=29 Score=42.79 Aligned_cols=88 Identities=18% Similarity=0.299 Sum_probs=62.6
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHH
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFK 813 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FK 813 (912)
=+|..++++.+.++.+++.|++++.+||....-+....+-| | + +..+. + -.|+ -|
T Consensus 443 l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l------G--I---------~~v~a----~---~~Pe-dK 497 (675)
T TIGR01497 443 LKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA------G--V---------DDFIA----E---ATPE-DK 497 (675)
T ss_pred ecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc------C--C---------CEEEc----C---CCHH-HH
Confidence 35788999999999999999999999998665555444333 1 1 11111 1 1333 39
Q ss_pred HHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 814 IACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 814 ie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
.+.++.+++ .+ . ..+-.||..+|+-+.+++++.
T Consensus 498 ~~~v~~lq~---~g-~-~VamvGDG~NDapAL~~AdvG 530 (675)
T TIGR01497 498 IALIRQEQA---EG-K-LVAMTGDGTNDAPALAQADVG 530 (675)
T ss_pred HHHHHHHHH---cC-C-eEEEECCCcchHHHHHhCCEe
Confidence 999999986 22 2 455699999999999997554
No 183
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=62.97 E-value=4.1 Score=41.16 Aligned_cols=18 Identities=11% Similarity=0.063 Sum_probs=16.4
Q ss_pred eCCchhhHHHHHhcCCCC
Q 002531 835 FGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 835 FGNR~tDV~aYRsVGIp~ 852 (912)
+||+..|+.+=+++|++.
T Consensus 165 igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred EeCcHhhHHHHHHCCCEE
Confidence 789999999999999974
No 184
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.86 E-value=3.4 Score=40.04 Aligned_cols=14 Identities=29% Similarity=0.434 Sum_probs=12.5
Q ss_pred EEEEecCCCccccc
Q 002531 711 IVISDVDGTITKSD 724 (912)
Q Consensus 711 VVISDIDGTITkSD 724 (912)
+||||+||||..+.
T Consensus 1 ~viFD~DGTL~D~~ 14 (175)
T TIGR01493 1 AMVFDVYGTLVDVH 14 (175)
T ss_pred CeEEecCCcCcccH
Confidence 58999999999875
No 185
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=62.72 E-value=29 Score=34.74 Aligned_cols=32 Identities=9% Similarity=-0.001 Sum_probs=25.5
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLT 770 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~T 770 (912)
.+++.++++.|+++|+++..+|+++.......
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~ 139 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKF 139 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 34568999999999999999999976544443
No 186
>PRK09449 dUMP phosphatase; Provisional
Probab=62.11 E-value=4 Score=41.19 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=13.0
Q ss_pred eEEEEecCCCccccc
Q 002531 710 KIVISDVDGTITKSD 724 (912)
Q Consensus 710 KVVISDIDGTITkSD 724 (912)
|.||||+||||...+
T Consensus 4 k~iiFDlDGTLid~~ 18 (224)
T PRK09449 4 DWILFDADETLFHFD 18 (224)
T ss_pred cEEEEcCCCchhcch
Confidence 689999999999644
No 187
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=61.64 E-value=3.3 Score=41.13 Aligned_cols=13 Identities=46% Similarity=0.741 Sum_probs=11.7
Q ss_pred EEEecCCCccccc
Q 002531 712 VISDVDGTITKSD 724 (912)
Q Consensus 712 VISDIDGTITkSD 724 (912)
||||+||||..|.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 7999999999875
No 188
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=61.05 E-value=4.9 Score=39.35 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=24.5
Q ss_pred HHHHHHHHHhCCCCCCcEEEeeCC-chhhHHHHHhcCCCCCcEEE
Q 002531 814 IACLEDIKKLFPSDYNPFYAGFGN-RDTDELSYRKIGIPKGKIFI 857 (912)
Q Consensus 814 ie~L~dIr~LFP~~~nPFyAGFGN-R~tDV~aYRsVGIp~~RIFi 857 (912)
.++|+.+++ .+. .++..=|| +.+-....+.+||+...||.
T Consensus 133 ~~~l~~L~~---~Gi-~~~i~TGD~~~~a~~~~~~lgi~~~~v~a 173 (215)
T PF00702_consen 133 KEALQELKE---AGI-KVAILTGDNESTASAIAKQLGIFDSIVFA 173 (215)
T ss_dssp HHHHHHHHH---TTE-EEEEEESSEHHHHHHHHHHTTSCSEEEEE
T ss_pred hhhhhhhhc---cCc-ceeeeeccccccccccccccccccccccc
Confidence 447778876 233 23333454 55556666678997776776
No 189
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=60.11 E-value=4.8 Score=40.35 Aligned_cols=15 Identities=40% Similarity=0.465 Sum_probs=13.7
Q ss_pred eEEEEecCCCccccc
Q 002531 710 KIVISDVDGTITKSD 724 (912)
Q Consensus 710 KVVISDIDGTITkSD 724 (912)
|+||||+||||..++
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 689999999999876
No 190
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=58.60 E-value=47 Score=41.73 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=66.1
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhh----------hhh
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLF----------REV 804 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALr----------REv 804 (912)
.|..++|+.+..+.+++.|++++.+||....-+..+..-+ |-.-+.+.+ +.-..+ ..+. -.+
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~------Gi~~~~~~~-v~g~~l-~~~~~~~l~~~~~~~~V 597 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL------GMPSKTSQS-VSGEKL-DAMDDQQLSQIVPKVAV 597 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc------CCCCCCCce-eEhHHh-HhCCHHHHHHHhhcCeE
Confidence 5788999999999999999999999999877666655333 110001111 111000 0000 023
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 805 IRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 805 i~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
..|--.+-|...++.++.. + -..+-.||..+|+.|.++++|
T Consensus 598 far~~P~~K~~iv~~lq~~---g--~~v~mvGDGvND~pAl~~AdV 638 (884)
T TIGR01522 598 FARASPEHKMKIVKALQKR---G--DVVAMTGDGVNDAPALKLADI 638 (884)
T ss_pred EEECCHHHHHHHHHHHHHC---C--CEEEEECCCcccHHHHHhCCe
Confidence 3444445688888888862 3 245668999999999999744
No 191
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=58.14 E-value=4.1 Score=40.72 Aligned_cols=13 Identities=38% Similarity=0.577 Sum_probs=11.8
Q ss_pred EEEecCCCccccc
Q 002531 712 VISDVDGTITKSD 724 (912)
Q Consensus 712 VISDIDGTITkSD 724 (912)
||||+||||..|.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 6999999999985
No 192
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=56.68 E-value=64 Score=32.03 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=39.8
Q ss_pred eEEEEecCC-----CcccccccCcc--CCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 710 KIVISDVDG-----TITKSDVLGQF--MPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 710 KVVISDIDG-----TITkSDvlGhi--lP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
...+-|++| +++.++..|.. +-+....|. -+.+.+++.++++.|..|+-+|.-+. .....|++.
T Consensus 7 ~f~~~~~~g~~~~~~~~l~~~~Gk~vvl~F~~~~~c~~C~~~l~~l~~~~~~~~~~~v~vv~Is~d~~---~~~~~~~~~ 83 (173)
T cd03015 7 DFKATAVVPNGEFKEISLSDYKGKWVVLFFYPLDFTFVCPTEIIAFSDRYEEFKKLNAEVLGVSTDSH---FSHLAWRNT 83 (173)
T ss_pred CCEeecccCCCCceEEehHHhCCCEEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCH---HHHHHHHHh
Confidence 345556666 56666655532 222323443 34677889999889999999986543 234567665
Q ss_pred h
Q 002531 777 L 777 (912)
Q Consensus 777 ~ 777 (912)
+
T Consensus 84 ~ 84 (173)
T cd03015 84 P 84 (173)
T ss_pred h
Confidence 4
No 193
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=56.49 E-value=54 Score=37.97 Aligned_cols=148 Identities=20% Similarity=0.215 Sum_probs=86.4
Q ss_pred EEEecCCCcccccccCccCCC-CCCCCCchHHHHHHHHHH-HCCCeEEEEccChhhhHHHHHHHHHhhhh-CCCCCCCCc
Q 002531 712 VISDVDGTITKSDVLGQFMPL-VGKDWTQSGVAKLFSAIK-ENGYQLLFLSARAIVQAYLTRSFLLNLKQ-DGNALPNGP 788 (912)
Q Consensus 712 VISDIDGTITkSDvlGhilP~-lGKDWth~GVAkLy~~I~-~NGYkILYLSgRpigqAd~TR~wL~~~~Q-~G~~LP~GP 788 (912)
-|.=+|=|+|.|+..|+..|+ +. -++.+|++|. ..|++=|.|-|-+-|- +..-.+|.-.++ +...+|..-
T Consensus 156 SILvLDYsLt~~~~~~~~yPtQL~------qlv~~Y~~Lv~~~G~~nI~LmGDSAGG-nL~Ls~LqyL~~~~~~~~Pk~~ 228 (374)
T PF10340_consen 156 SILVLDYSLTSSDEHGHKYPTQLR------QLVATYDYLVESEGNKNIILMGDSAGG-NLALSFLQYLKKPNKLPYPKSA 228 (374)
T ss_pred eEEEEeccccccccCCCcCchHHH------HHHHHHHHHHhccCCCeEEEEecCccH-HHHHHHHHHHhhcCCCCCCcee
Confidence 333466778877767787776 42 3788999998 8899878787765542 222234443333 345899999
Q ss_pred eeeCCCCCCchhh-hhhc----ccCcHHHHHHHHHHHHHhCCCC----CCcEEEeeCCchh--hHHHHHhcCCCCCcEEE
Q 002531 789 VVISPDGLFPSLF-REVI----RRAPHEFKIACLEDIKKLFPSD----YNPFYAGFGNRDT--DELSYRKIGIPKGKIFI 857 (912)
Q Consensus 789 vLLSPd~Lf~ALr-REvi----~RkPe~FKie~L~dIr~LFP~~----~nPFyAGFGNR~t--DV~aYRsVGIp~~RIFi 857 (912)
+++||=--..... .+.- ..+-+..-...+....+.|-.+ ....+.-|.|... |...|+.+ ++...+|+
T Consensus 229 iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I-~~~~~vfV 307 (374)
T PF10340_consen 229 ILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI-LKKYSVFV 307 (374)
T ss_pred EEECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh-ccCCcEEE
Confidence 9999843222100 0100 0011112222333444444333 1122334666555 88999999 88889999
Q ss_pred ECCCCceeec
Q 002531 858 INPKGEVAIS 867 (912)
Q Consensus 858 InpkGel~~~ 867 (912)
|=-..|+...
T Consensus 308 i~Ge~Evfrd 317 (374)
T PF10340_consen 308 IYGEDEVFRD 317 (374)
T ss_pred EECCccccHH
Confidence 8777777544
No 194
>cd02964 TryX_like_family Tryparedoxin (TryX)-like family; composed of TryX and related proteins including nucleoredoxin (NRX), rod-derived cone viability factor (RdCVF) and the nematode homolog described as a 16-kD class of TRX. Most members of this family, except RdCVF, are protein disulfide oxidoreductases containing an active site CXXC motif, similar to TRX.
Probab=56.34 E-value=52 Score=31.05 Aligned_cols=35 Identities=11% Similarity=0.370 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHC--CCeEEEEccChhhhHHHHHHHHHh
Q 002531 740 SGVAKLFSAIKEN--GYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 740 ~GVAkLy~~I~~N--GYkILYLSgRpigqAd~TR~wL~~ 776 (912)
+-+.++++++++. +..|++++..+. ....+.|++.
T Consensus 37 p~l~~l~~~~~~~~~~v~vi~Vs~d~~--~~~~~~~~~~ 73 (132)
T cd02964 37 PKLVEFYEKLKEEGKNFEIVFVSRDRS--EESFNEYFSE 73 (132)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEecCCC--HHHHHHHHhc
Confidence 3456677777765 677888886543 3456667764
No 195
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=52.07 E-value=45 Score=32.87 Aligned_cols=14 Identities=21% Similarity=0.321 Sum_probs=12.7
Q ss_pred EEEEecCCCccccc
Q 002531 711 IVISDVDGTITKSD 724 (912)
Q Consensus 711 VVISDIDGTITkSD 724 (912)
+||||+||||..+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 69999999999874
No 196
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=51.88 E-value=5.5 Score=38.22 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=13.7
Q ss_pred EEEEecCCCccccccc
Q 002531 711 IVISDVDGTITKSDVL 726 (912)
Q Consensus 711 VVISDIDGTITkSDvl 726 (912)
+||||+||||..++..
T Consensus 1 ~vlFDlDgtLv~~~~~ 16 (183)
T TIGR01509 1 AILFDLDGVLVDTSSA 16 (183)
T ss_pred CeeeccCCceechHHH
Confidence 4899999999998654
No 197
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=51.55 E-value=51 Score=41.49 Aligned_cols=105 Identities=17% Similarity=0.134 Sum_probs=67.1
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCC-------CCchhh-hhhcc
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDG-------LFPSLF-REVIR 806 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~-------Lf~ALr-REvi~ 806 (912)
.|..++++.+..+.+++.|.+++.+||-...-+..+-+- .++..+.++.-.+- +...+. -.+..
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~--------lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA 584 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE--------VGIDANDFLLGADIEELSDEELARELRKYHIFA 584 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--------cCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE
Confidence 588899999999999999999999999766555443322 23333333321110 000000 02333
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 807 RAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 807 RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
|---+-|.+..+.++. .+ -..|-.||..+|+-|.+++ ||..
T Consensus 585 r~~Pe~K~~iV~~lq~---~G--~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 585 RLTPMQKSRIIGLLKK---AG--HTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred ECCHHHHHHHHHHHHh---CC--CEEEEECCCcccHHHHHhCCEEEEe
Confidence 3333458888888886 23 2466689999999999985 6554
No 198
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=50.66 E-value=1.1e+02 Score=28.46 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
+.+.+++.++...|..|+-+|... ....++|++.+
T Consensus 44 ~~l~~~~~~~~~~~~~vv~is~d~---~~~~~~~~~~~ 78 (140)
T cd03017 44 CDFRDLYEEFKALGAVVIGVSPDS---VESHAKFAEKY 78 (140)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHh
Confidence 466788888888899999998643 35567777653
No 199
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=50.36 E-value=13 Score=39.97 Aligned_cols=36 Identities=17% Similarity=0.522 Sum_probs=26.4
Q ss_pred chHHHHHHHHH--HHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 739 QSGVAKLFSAI--KENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 739 h~GVAkLy~~I--~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
++|+.++++.+ +..|+.++.+|- +-.-.+..||+.+
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~ 110 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHH 110 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhC
Confidence 34777888888 457899998874 4556677888764
No 200
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=50.34 E-value=71 Score=40.50 Aligned_cols=106 Identities=17% Similarity=0.143 Sum_probs=68.5
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCC-CCCceeeCCCCCCchh----------hh
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNAL-PNGPVVISPDGLFPSL----------FR 802 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~L-P~GPvLLSPd~Lf~AL----------rR 802 (912)
=.|..++++.+..+.+++.|.+++.+||....-|..+..=+ ++ +.+-..+.-..+ ..+ +-
T Consensus 576 ~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~--------GI~~~~~~vi~G~~~-~~l~~~el~~~i~~~ 646 (941)
T TIGR01517 576 IKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC--------GILTFGGLAMEGKEF-RRLVYEEMDPILPKL 646 (941)
T ss_pred ccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc--------CCCCCCceEeeHHHh-hhCCHHHHHHHhccC
Confidence 35788999999999999999999999999766555554333 22 111111211110 000 00
Q ss_pred hhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCCC
Q 002531 803 EVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPKG 853 (912)
Q Consensus 803 Evi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~~ 853 (912)
.+..|---+-|.+.++.+++ .+ ...|-.||..+|+-|.+++ ||..+
T Consensus 647 ~Vfar~sPe~K~~iV~~lq~---~g--~vVam~GDGvNDapALk~AdVGIAmg 694 (941)
T TIGR01517 647 RVLARSSPLDKQLLVLMLKD---MG--EVVAVTGDGTNDAPALKLADVGFSMG 694 (941)
T ss_pred eEEEECCHHHHHHHHHHHHH---CC--CEEEEECCCCchHHHHHhCCcceecC
Confidence 23344444569999998886 23 2567799999999999985 77543
No 201
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=49.97 E-value=28 Score=36.86 Aligned_cols=31 Identities=23% Similarity=0.486 Sum_probs=21.1
Q ss_pred eEEEEecCCCccccccc-CccCCC--------CCCCCCch
Q 002531 710 KIVISDVDGTITKSDVL-GQFMPL--------VGKDWTQS 740 (912)
Q Consensus 710 KVVISDIDGTITkSDvl-GhilP~--------lGKDWth~ 740 (912)
++|+.||.||+|--... -.++|| +...|.++
T Consensus 2 ~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~ 41 (220)
T TIGR01691 2 KNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST 41 (220)
T ss_pred CEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH
Confidence 68999999999953322 345787 45556555
No 202
>PRK13599 putative peroxiredoxin; Provisional
Probab=49.82 E-value=68 Score=33.90 Aligned_cols=26 Identities=23% Similarity=0.162 Sum_probs=22.2
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChh
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAI 764 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpi 764 (912)
....++++.++++.|.+||=+|.-..
T Consensus 48 l~~l~~~~~~f~~~gv~vigIS~D~~ 73 (215)
T PRK13599 48 FVEFARKANDFKELNTELIGLSVDQV 73 (215)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 45788999999999999999997654
No 203
>cd02968 SCO SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properti
Probab=49.72 E-value=78 Score=29.55 Aligned_cols=37 Identities=14% Similarity=0.311 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHCC---CeEEEEccChh-hhHHHHHHHHHhh
Q 002531 741 GVAKLFSAIKENG---YQLLFLSARAI-VQAYLTRSFLLNL 777 (912)
Q Consensus 741 GVAkLy~~I~~NG---YkILYLSgRpi-gqAd~TR~wL~~~ 777 (912)
.+.+++.+++++| ..|+.+|.-+. ......++|++.+
T Consensus 44 ~l~~~~~~~~~~~~~~v~~v~vs~d~~~d~~~~~~~~~~~~ 84 (142)
T cd02968 44 NLAQALKQLGADGGDDVQVVFISVDPERDTPEVLKAYAKAF 84 (142)
T ss_pred HHHHHHHHhhHhhcCceEEEEEEECCCCCCHHHHHHHHHHh
Confidence 4567777787775 88888887543 2345566777654
No 204
>PRK13189 peroxiredoxin; Provisional
Probab=49.01 E-value=91 Score=33.01 Aligned_cols=63 Identities=21% Similarity=0.288 Sum_probs=37.3
Q ss_pred EEecCCCcccccc-cCc-c-CCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhh
Q 002531 713 ISDVDGTITKSDV-LGQ-F-MPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLK 778 (912)
Q Consensus 713 ISDIDGTITkSDv-lGh-i-lP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~ 778 (912)
+-+++|++..++. .|. + +=+.-.+|+ ....++++..+++.|.+||-+|.-+. ...++|++.+.
T Consensus 20 ~~~~~g~~~l~d~~~Gk~vvL~f~pa~fcpvC~tEl~~l~~~~~ef~~~~v~VigvS~D~~---~~h~aw~~~~~ 91 (222)
T PRK13189 20 VKTTHGPIKLPDDYKGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRELNTELIGLSIDQV---FSHIKWVEWIK 91 (222)
T ss_pred eEcCCCCEeeHHHhCCCeEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHHhHH
Confidence 3344555555443 343 1 112344554 34677889999999999999986432 23456776553
No 205
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=48.51 E-value=68 Score=32.97 Aligned_cols=107 Identities=21% Similarity=0.286 Sum_probs=67.2
Q ss_pred EecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCC
Q 002531 714 SDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISP 793 (912)
Q Consensus 714 SDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSP 793 (912)
-++++||+.. |.+++ -|.+..+.|++. ..|..-||--.+.-....+++ ++| -
T Consensus 19 ~~v~~tiatg---Gklf~---------ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~--------gi~-------~ 70 (152)
T COG4087 19 GKVLYTIATG---GKLFS---------EVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV--------GIP-------V 70 (152)
T ss_pred ceEEEEEccC---cEEcH---------hhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc--------CCc-------e
Confidence 3688999973 44443 466677777777 788888875544333222222 222 2
Q ss_pred CCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECCCCce
Q 002531 794 DGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEV 864 (912)
Q Consensus 794 d~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel 864 (912)
.+.| .-.+.+-|+..++.++. + +.+.+..||..+|+.|.|+.-+- |-+|.+.|..
T Consensus 71 ~rv~--------a~a~~e~K~~ii~eLkk---~--~~k~vmVGnGaND~laLr~ADlG---I~tiq~e~v~ 125 (152)
T COG4087 71 ERVF--------AGADPEMKAKIIRELKK---R--YEKVVMVGNGANDILALREADLG---ICTIQQEGVP 125 (152)
T ss_pred eeee--------cccCHHHHHHHHHHhcC---C--CcEEEEecCCcchHHHhhhcccc---eEEeccCCcc
Confidence 2222 12445679999999985 2 34667799999999999997553 3577774443
No 206
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=48.41 E-value=63 Score=30.20 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=15.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEcc
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSA 761 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSg 761 (912)
.+.+.+|++++++.|..||.++.
T Consensus 42 ~p~l~~l~~~~~~~~~~vi~i~~ 64 (126)
T cd03012 42 LPYLTDLEQKYKDDGLVVIGVHS 64 (126)
T ss_pred HHHHHHHHHHcCcCCeEEEEecc
Confidence 34566777777777777777764
No 207
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=46.83 E-value=68 Score=40.67 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=67.6
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCC-------CCCCchhhh-hhcc
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISP-------DGLFPSLFR-EVIR 806 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSP-------d~Lf~ALrR-Evi~ 806 (912)
.|..++++.+..+.+++.|.+++.+||-...-+..+-+=| ++..+.++.-. +.|...+.+ .+..
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l--------GI~~~~vi~G~el~~~~~~el~~~v~~~~VfA 619 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV--------GLEPGEPLLGTEIEAMDDAALAREVEERTVFA 619 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCCCCCccchHhhhhCCHHHHHHHhhhCCEEE
Confidence 5888999999999999999999999997655444443222 33333322111 000000000 2334
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCCC
Q 002531 807 RAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPKG 853 (912)
Q Consensus 807 RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~~ 853 (912)
|---+-|...++.+++ .+ -.+|-.||..||+-|.+++ ||..+
T Consensus 620 r~sPe~K~~iV~~Lq~---~G--~vVamtGDGvNDaPALk~ADVGIAmg 663 (903)
T PRK15122 620 KLTPLQKSRVLKALQA---NG--HTVGFLGDGINDAPALRDADVGISVD 663 (903)
T ss_pred EeCHHHHHHHHHHHHh---CC--CEEEEECCCchhHHHHHhCCEEEEeC
Confidence 4334469999998886 23 3466689999999999984 76653
No 208
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=45.64 E-value=76 Score=40.57 Aligned_cols=107 Identities=21% Similarity=0.331 Sum_probs=74.3
Q ss_pred CCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC
Q 002531 708 NAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG 787 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G 787 (912)
+.-+|.+-|||+++- + +-=.|-.+++++..++.|++.|++++.|||--+.-|..+.+=+ |
T Consensus 702 g~tvv~v~vn~~l~g---v-----~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V------G------ 761 (951)
T KOG0207|consen 702 GQTVVYVAVNGQLVG---V-----FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV------G------ 761 (951)
T ss_pred CceEEEEEECCEEEE---E-----EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh------C------
Confidence 345667777777764 1 1124667899999999999999999999999888877766433 1
Q ss_pred ceeeCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHh--cCCCC
Q 002531 788 PVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRK--IGIPK 852 (912)
Q Consensus 788 PvLLSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRs--VGIp~ 852 (912)
-+. .|.|+ +|+ -|.+.+++|+. +..+ .|=.||..||.-+..+ +||..
T Consensus 762 -----i~~----V~aev---~P~-~K~~~Ik~lq~----~~~~-VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 762 -----IDN----VYAEV---LPE-QKAEKIKEIQK----NGGP-VAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred -----cce----EEecc---Cch-hhHHHHHHHHh----cCCc-EEEEeCCCCccHHHHhhccceee
Confidence 111 13332 232 38889999986 3344 4448999999998887 47654
No 209
>PF13464 DUF4115: Domain of unknown function (DUF4115)
Probab=45.45 E-value=25 Score=31.08 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=22.3
Q ss_pred cCCceEecccccccccccccEEEEEECCeeeeee
Q 002531 43 STPWYVRFGKFQGVLKGAEKVVRITVNGVEANFH 76 (912)
Q Consensus 43 ~sPfhVRFGk~qgvl~~~ek~V~i~VNg~~~~~~ 76 (912)
..||.||+|+.. -|+|++||+++++.
T Consensus 37 ~~~~~i~iGna~--------~v~v~~nG~~~~~~ 62 (77)
T PF13464_consen 37 KEPFRIRIGNAG--------AVEVTVNGKPVDLL 62 (77)
T ss_pred CCCEEEEEeCCC--------cEEEEECCEECCCC
Confidence 469999999984 57999999999873
No 210
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=45.04 E-value=12 Score=44.37 Aligned_cols=39 Identities=23% Similarity=0.247 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcEEEECC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINP 860 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RIFiInp 860 (912)
|...|+ +.+..+ .+-| ||||..+|..+...++- -|.|++
T Consensus 177 Kv~rl~---~~~g~~-~~~~-aYgDS~sD~plL~~a~e----~y~V~~ 215 (497)
T PLN02177 177 KRDAVL---KEFGDA-LPDL-GLGDRETDHDFMSICKE----GYMVPR 215 (497)
T ss_pred HHHHHH---HHhCCC-CceE-EEECCccHHHHHHhCCc----cEEeCC
Confidence 555554 334322 2334 59999999999998763 356666
No 211
>PTZ00253 tryparedoxin peroxidase; Provisional
Probab=44.83 E-value=53 Score=33.66 Aligned_cols=25 Identities=12% Similarity=0.029 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChh
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAI 764 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpi 764 (912)
...++++..++..|.+||-+|..+.
T Consensus 57 ~~l~~~~~~f~~~g~~vv~IS~d~~ 81 (199)
T PTZ00253 57 IQFSDSVKRFNELNCEVLACSMDSE 81 (199)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCH
Confidence 3778999999999999999997654
No 212
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=44.67 E-value=98 Score=38.43 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=65.8
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCC-----chhh----h--
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLF-----PSLF----R-- 802 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf-----~ALr----R-- 802 (912)
=.|..++++++..+.+++.|.+++.+||....-+..+-+=+ ++... .+..+.+. ..+. .
T Consensus 439 l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l--------GI~~~--~~~~~~l~~~~~~~~~~~~~~~~~ 508 (755)
T TIGR01647 439 LFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL--------GLGTN--IYTADVLLKGDNRDDLPSGELGEM 508 (755)
T ss_pred ccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCCCC--CcCHHHhcCCcchhhCCHHHHHHH
Confidence 35888999999999999999999999998876655554322 33221 11111110 0000 0
Q ss_pred ----hhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 803 ----EVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 803 ----Evi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
.+..|---+-|.+.++.+++ .+ -..+-.||..+|+-|.+++ ||..
T Consensus 509 ~~~~~vfAr~~Pe~K~~iV~~lq~---~G--~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 509 VEDADGFAEVFPEHKYEIVEILQK---RG--HLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred HHhCCEEEecCHHHHHHHHHHHHh---cC--CEEEEEcCCcccHHHHHhCCeeEEe
Confidence 02222222358888888886 23 2466689999999999985 7654
No 213
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=44.64 E-value=89 Score=38.75 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=58.0
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHH
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKI 814 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKi 814 (912)
+|-.++++.++++.|++.|++++.|||....-+....+-| ++. . +. + -.|+ =|.
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l--------gi~-------~---~~----~---~~p~-~K~ 619 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL--------GID-------F---RA----G---LLPE-DKV 619 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--------CCC-------e---ec----C---CCHH-HHH
Confidence 4677899999999999999999999998766555544333 121 0 00 0 1232 388
Q ss_pred HHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcC
Q 002531 815 ACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIG 849 (912)
Q Consensus 815 e~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVG 849 (912)
+.+++++. .. . .+-+||..+|+.+.++.+
T Consensus 620 ~~v~~l~~----~~-~-v~mvGDgiNDapAl~~A~ 648 (741)
T PRK11033 620 KAVTELNQ----HA-P-LAMVGDGINDAPAMKAAS 648 (741)
T ss_pred HHHHHHhc----CC-C-EEEEECCHHhHHHHHhCC
Confidence 88888874 22 3 344799999999999875
No 214
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=44.51 E-value=99 Score=40.04 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=67.0
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCC-----------ceeeCCCCCCchhh-
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNG-----------PVVISPDGLFPSLF- 801 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~G-----------PvLLSPd~Lf~ALr- 801 (912)
=.|..++++.+..+.+++.|.+++.+||....-+..+..=+ ++... -..++-..+ ..+.
T Consensus 643 ~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~--------Gi~~~~~~~~~~~~~~~~vitG~~l-~~l~~ 713 (1053)
T TIGR01523 643 IYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV--------GIIPPNFIHDRDEIMDSMVMTGSQF-DALSD 713 (1053)
T ss_pred eecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc--------CCCCccccccccccccceeeehHHh-hhcCH
Confidence 35888999999999999999999999998766555443222 22111 011111110 0010
Q ss_pred ---------hhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 802 ---------REVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 802 ---------REvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
..+..|---.-|.+.++.+++. + ...+..||..+|+-|.+++ ||..
T Consensus 714 ~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~---g--~~Vam~GDGvNDapaLk~AdVGIAm 770 (1053)
T TIGR01523 714 EEVDDLKALCLVIARCAPQTKVKMIEALHRR---K--AFCAMTGDGVNDSPSLKMANVGIAM 770 (1053)
T ss_pred HHHHHHhhcCeEEEecCHHHHHHHHHHHHhc---C--CeeEEeCCCcchHHHHHhCCccEec
Confidence 0133444445688888888862 2 3456799999999999985 6643
No 215
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=44.03 E-value=10 Score=35.38 Aligned_cols=14 Identities=43% Similarity=0.769 Sum_probs=12.1
Q ss_pred EEEecCCCcccccc
Q 002531 712 VISDVDGTITKSDV 725 (912)
Q Consensus 712 VISDIDGTITkSDv 725 (912)
||||+||||..++.
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 79999999998654
No 216
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=42.63 E-value=1.3e+02 Score=34.98 Aligned_cols=85 Identities=24% Similarity=0.304 Sum_probs=63.2
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHH
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKI 814 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKi 814 (912)
.|-.++++.+....+++.|++++.+||....-+..+...|. + + .+-...-|.
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lg--------i------------~--------~~~~p~~K~ 396 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELG--------I------------F--------ARVTPEEKA 396 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC--------c------------e--------eccCHHHHH
Confidence 46778999999999999999999999999888777776661 1 1 112234588
Q ss_pred HHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 815 ACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 815 e~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
++++.++. .++ ..+-.||..+|..|.++. ||-.
T Consensus 397 ~~v~~l~~---~g~--~v~~vGDg~nD~~al~~Advgia~ 431 (499)
T TIGR01494 397 ALVEALQK---KGR--VVAMTGDGVNDAPALKKADVGIAM 431 (499)
T ss_pred HHHHHHHH---CCC--EEEEECCChhhHHHHHhCCCcccc
Confidence 88888875 232 345579999999999986 5444
No 217
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=41.78 E-value=15 Score=36.90 Aligned_cols=16 Identities=25% Similarity=0.335 Sum_probs=13.7
Q ss_pred eEEEEecCCCcccccc
Q 002531 710 KIVISDVDGTITKSDV 725 (912)
Q Consensus 710 KVVISDIDGTITkSDv 725 (912)
..||||+||||..++.
T Consensus 1 ~~viFDldgvL~d~~~ 16 (199)
T PRK09456 1 MLYIFDLGNVIVDIDF 16 (199)
T ss_pred CEEEEeCCCccccCcH
Confidence 3699999999999864
No 218
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=41.57 E-value=45 Score=34.63 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGI 850 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGI 850 (912)
|-..|+.+...+.-.....++ |||..+|+.|.+.+|+
T Consensus 200 K~~~l~~l~~~~gi~~~e~i~-~GD~~NDi~m~~~ag~ 236 (272)
T PRK10530 200 KGKRLTQWVEAQGWSMKNVVA-FGDNFNDISMLEAAGL 236 (272)
T ss_pred hHHHHHHHHHHcCCCHHHeEE-eCCChhhHHHHHhcCc
Confidence 777778777665433334555 9999999999999996
No 219
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=40.99 E-value=1.9e+02 Score=27.86 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
+...+++++++.+|..||-+|... ....++|++.+
T Consensus 51 ~~l~~~~~~~~~~~v~vi~Is~d~---~~~~~~~~~~~ 85 (154)
T PRK09437 51 CGLRDNMDELKKAGVVVLGISTDK---PEKLSRFAEKE 85 (154)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHh
Confidence 456789999999999999998653 36677888653
No 220
>COG4996 Predicted phosphatase [General function prediction only]
Probab=40.07 E-value=1e+02 Score=31.74 Aligned_cols=92 Identities=20% Similarity=0.258 Sum_probs=50.4
Q ss_pred eEEEEecCCCcccccccCccCCCC------------CCCC-CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLV------------GKDW-TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~l------------GKDW-th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
++|++|.|||+..-+-...+-|-. |..- -.+.|.++..-.+..||-+ |.-+|+.....-+=|+-
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~---~~~sWN~~~kA~~aLra 77 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYIL---GLASWNFEDKAIKALRA 77 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEE---EEeecCchHHHHHHHHH
Confidence 468999999999754333333321 1111 1446667777677777733 33445555544444543
Q ss_pred hhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHHH--HHHHHH
Q 002531 777 LKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKIA--CLEDIK 821 (912)
Q Consensus 777 ~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKie--~L~dIr 821 (912)
. .+..-||--|+..+|..||+- .|+.|+
T Consensus 78 l-----------------~~~~yFhy~ViePhP~K~~ML~~llr~i~ 107 (164)
T COG4996 78 L-----------------DLLQYFHYIVIEPHPYKFLMLSQLLREIN 107 (164)
T ss_pred h-----------------chhhhEEEEEecCCChhHHHHHHHHHHHH
Confidence 2 112223556787788766664 444444
No 221
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=40.01 E-value=27 Score=40.72 Aligned_cols=56 Identities=23% Similarity=0.496 Sum_probs=42.6
Q ss_pred cCCCeEEEEecCCCcccccccCccCCCCCCCCC--chHHHHHHHHHHHCCCeEEEEccC
Q 002531 706 KWNAKIVISDVDGTITKSDVLGQFMPLVGKDWT--QSGVAKLFSAIKENGYQLLFLSAR 762 (912)
Q Consensus 706 ~~~~KVVISDIDGTITkSDvlGhilP~lGKDWt--h~GVAkLy~~I~~NGYkILYLSgR 762 (912)
+.+.|++.||.||||.+.+ -|-+.|.---||. ++-+..=+..+.++||++++-|--
T Consensus 72 ~~~~K~i~FD~dgtlI~t~-sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTK-SGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred CCCcceEEEecCCceeecC-CcceeeccCccceeeccccchhhhhhccCCeEEEEEecc
Confidence 4568999999999999765 3466777666774 666666667777999999987753
No 222
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=39.98 E-value=17 Score=36.43 Aligned_cols=18 Identities=33% Similarity=0.477 Sum_probs=15.0
Q ss_pred CCeEEEEecCCCcccccc
Q 002531 708 NAKIVISDVDGTITKSDV 725 (912)
Q Consensus 708 ~~KVVISDIDGTITkSDv 725 (912)
..++|+||+||||...+.
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 458999999999998654
No 223
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=39.16 E-value=1.6e+02 Score=36.73 Aligned_cols=88 Identities=16% Similarity=0.299 Sum_probs=61.5
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHHH
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFKI 814 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FKi 814 (912)
+|..++|+.+.++.+++.|.+++.|||-...-+ ..+.+ | .++. ..+ .|---+-|.
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA----~aIA~--e--lGId---------~v~--------A~~~PedK~ 497 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTA----AAIAA--E--AGVD---------DFL--------AEATPEDKL 497 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHH----HHHHH--H--cCCc---------EEE--------ccCCHHHHH
Confidence 577899999999999999999999999665443 33432 1 1221 111 122223499
Q ss_pred HHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 815 ACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 815 e~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
+.++.+++ .+ ..+|-.||..||.-|.++. ||..
T Consensus 498 ~iV~~lQ~---~G--~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 498 ALIRQEQA---EG--RLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred HHHHHHHH---cC--CeEEEECCCcchHHHHHhCCEeEEe
Confidence 99999986 23 3466689999999999985 6654
No 224
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=39.00 E-value=25 Score=36.72 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=51.7
Q ss_pred CCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchh----hhhhcccCcHHH
Q 002531 737 WTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSL----FREVIRRAPHEF 812 (912)
Q Consensus 737 Wth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~AL----rREvi~RkPe~F 812 (912)
++.+++.++++.+.++|+++ ++|..+..+.... +. .+..|+ ++.++ .......||+..
T Consensus 138 ~~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~---~~-------~~~~g~-------~~~~i~~~g~~~~~~gKP~~~ 199 (242)
T TIGR01459 138 LDLDEFDELFAPIVARKIPN-ICANPDRGINQHG---IY-------RYGAGY-------YAELIKQLGGKVIYSGKPYPA 199 (242)
T ss_pred CCHHHHHHHHHHHHhCCCcE-EEECCCEeccCCC---ce-------EecccH-------HHHHHHHhCCcEecCCCCCHH
Confidence 77899999999998899997 7787765443211 11 111111 11211 111123455432
Q ss_pred HHH-HHHHHHHhCCCCCCcEEEeeCCc-hhhHHHHHhcCCCC
Q 002531 813 KIA-CLEDIKKLFPSDYNPFYAGFGNR-DTDELSYRKIGIPK 852 (912)
Q Consensus 813 Kie-~L~dIr~LFP~~~nPFyAGFGNR-~tDV~aYRsVGIp~ 852 (912)
-.. +++.+.. -+. ...+. +||+ .+|+.+-++.|+..
T Consensus 200 ~~~~~~~~~~~-~~~--~~~~~-vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 200 IFHKALKECSN-IPK--NRMLM-VGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHcCC-CCc--ccEEE-ECCCcHHHHHHHHHCCCeE
Confidence 222 2333321 111 12334 8999 69999999999964
No 225
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=38.72 E-value=15 Score=40.33 Aligned_cols=69 Identities=20% Similarity=0.236 Sum_probs=52.0
Q ss_pred cCCCeEEEEecCCCcccccc--c-----CccCCCCCCCC-------CchHHHHHHHHHHHCCCeEEEEccChhhhHHHHH
Q 002531 706 KWNAKIVISDVDGTITKSDV--L-----GQFMPLVGKDW-------TQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTR 771 (912)
Q Consensus 706 ~~~~KVVISDIDGTITkSDv--l-----GhilP~lGKDW-------th~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR 771 (912)
..+.|.+|.|+|.|+-.|.. . .+..|..-.+- .+|++.++..++.++ |.+|..||-...+|+..-
T Consensus 86 ~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~ 164 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLL 164 (262)
T ss_pred cCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHH
Confidence 45679999999999998863 1 12222211111 267999999999887 999999999999999999
Q ss_pred HHHH
Q 002531 772 SFLL 775 (912)
Q Consensus 772 ~wL~ 775 (912)
++|.
T Consensus 165 D~LD 168 (262)
T KOG1605|consen 165 DILD 168 (262)
T ss_pred HHcc
Confidence 9997
No 226
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=37.96 E-value=2e+02 Score=35.86 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=63.3
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCchhhhhhcccCcHHHH
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPSLFREVIRRAPHEFK 813 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~ALrREvi~RkPe~FK 813 (912)
=+|..++++.+.++.+++.|.+++-+||-...-+....+-+ ++. ..| .|---+-|
T Consensus 438 l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el--------GI~---------~v~--------A~~~PedK 492 (673)
T PRK14010 438 LKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA--------GVD---------RFV--------AECKPEDK 492 (673)
T ss_pred eecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc--------CCc---------eEE--------cCCCHHHH
Confidence 35888999999999999999999999998766555544333 221 111 12222359
Q ss_pred HHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCC
Q 002531 814 IACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPK 852 (912)
Q Consensus 814 ie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~ 852 (912)
.+.++.+++ .+ ..+|=-||..||+-|.++. ||..
T Consensus 493 ~~iV~~lQ~---~G--~~VaMtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 493 INVIREEQA---KG--HIVAMTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred HHHHHHHHh---CC--CEEEEECCChhhHHHHHhCCEEEEe
Confidence 999999886 23 2455579999999999986 6654
No 227
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=37.26 E-value=84 Score=35.55 Aligned_cols=63 Identities=21% Similarity=0.286 Sum_probs=42.0
Q ss_pred EeecCCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 703 YLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 703 YLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
++|.. +.+|+||+|.||..+.-. ..-..+.|.+-++.+++.|.-++.-|. |-++..+.=|+.+
T Consensus 117 ~~~~~-phVIVfDlD~TLItd~~~--------v~Ir~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~ 179 (297)
T PF05152_consen 117 LVWEP-PHVIVFDLDSTLITDEGD--------VRIRDPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKEL 179 (297)
T ss_pred ccCCC-CcEEEEECCCcccccCCc--------cccCChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHh
Confidence 44433 579999999999875321 123457899999999999975554443 4455555555544
No 228
>PRK13191 putative peroxiredoxin; Provisional
Probab=37.12 E-value=1.3e+02 Score=31.70 Aligned_cols=63 Identities=19% Similarity=0.218 Sum_probs=37.5
Q ss_pred EEEecCCCccccc-ccCc--cCCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 712 VISDVDGTITKSD-VLGQ--FMPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 712 VISDIDGTITkSD-vlGh--ilP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
..-+.+|++..++ ..|. ++=+.-.+|+ .+..++++..++++|.+||=+|..+.- .-++|...+
T Consensus 17 ~l~~~~G~~~l~~~~~GK~vvLff~pa~ftpvC~tEl~~l~~~~~ef~~~g~~VigvS~Ds~~---~h~aw~~~~ 88 (215)
T PRK13191 17 EVITTHGKIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNI---SHIEWVMWI 88 (215)
T ss_pred EeecCCCCEEcHHHhCCCcEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH---HHHHHHhhH
Confidence 3344456655544 2343 1112345565 457889999999999999999976542 234454443
No 229
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=37.09 E-value=33 Score=35.79 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..|+.|...+.-.....+| |||..+|+.|.+.+|+.
T Consensus 197 Kg~al~~l~~~~gi~~~~v~a-fGD~~NDi~Ml~~ag~~ 234 (270)
T PRK10513 197 KGTGVKSLAEHLGIKPEEVMA-IGDQENDIAMIEYAGVG 234 (270)
T ss_pred hHHHHHHHHHHhCCCHHHEEE-ECCchhhHHHHHhCCce
Confidence 888888888776544344555 99999999999999874
No 230
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=36.65 E-value=40 Score=33.94 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..|+.+...+.-.....++ |||..+|+.|.+.+|+.
T Consensus 150 K~~~i~~l~~~~~i~~~~~i~-~GD~~NDi~m~~~ag~~ 187 (225)
T TIGR01482 150 KGVAVKKLKEKLGIKPGETLV-CGDSENDIDLFEVPGFG 187 (225)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHhhHHHHHhcCce
Confidence 777777777655433334555 99999999999999875
No 231
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=36.58 E-value=37 Score=35.75 Aligned_cols=38 Identities=21% Similarity=0.202 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|...|+.|...+.-.....+| |||..+|+.|.+.+|+.
T Consensus 189 Kg~al~~l~~~~gi~~~~v~a-fGD~~NDi~Ml~~ag~~ 226 (272)
T PRK15126 189 KGAALAVLSQHLGLSLADCMA-FGDAMNDREMLGSVGRG 226 (272)
T ss_pred hHHHHHHHHHHhCCCHHHeEE-ecCCHHHHHHHHHcCCc
Confidence 888899888776544445555 99999999999999864
No 232
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=36.26 E-value=93 Score=32.14 Aligned_cols=63 Identities=24% Similarity=0.335 Sum_probs=42.4
Q ss_pred EEEecCC-CcccccccCc--cCCCCCCCCCch------HHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 712 VISDVDG-TITKSDVLGQ--FMPLVGKDWTQS------GVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 712 VISDIDG-TITkSDvlGh--ilP~lGKDWth~------GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
-.=|.|| ||+.||.+|. ++-+--+|||-- +-.+++..+...|+.+|=+|.-+.. ..+.|-.++
T Consensus 14 ~Lp~~~g~~v~Lsd~~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS~Ds~~---~~~~F~~k~ 85 (157)
T COG1225 14 ELPDQDGETVSLSDLRGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGISPDSPK---SHKKFAEKH 85 (157)
T ss_pred EeecCCCCEEehHHhcCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEeCCCHH---HHHHHHHHh
Confidence 3445666 7888888886 233356777632 5568888889999999988876553 345555543
No 233
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=35.74 E-value=2.9e+02 Score=26.04 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
+.+.++++++.+.|.+|+-+|.-+ ....++|++.+
T Consensus 49 ~~l~~~~~~~~~~~v~vi~vs~d~---~~~~~~~~~~~ 83 (149)
T cd03018 49 CALRDSLELFEAAGAEVLGISVDS---PFSLRAWAEEN 83 (149)
T ss_pred HHHHHHHHHHHhCCCEEEEecCCC---HHHHHHHHHhc
Confidence 467788999988899999988654 34577888653
No 234
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=35.48 E-value=1.1e+02 Score=32.32 Aligned_cols=105 Identities=20% Similarity=0.264 Sum_probs=67.6
Q ss_pred CeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCc
Q 002531 709 AKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGP 788 (912)
Q Consensus 709 ~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GP 788 (912)
-+.||.|+|-||.-=|.. -.-+-+.+.+..++.+|-+++.+|. +-......|++.+
T Consensus 28 ikgvi~DlDNTLv~wd~~----------~~tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l----------- 83 (175)
T COG2179 28 IKGVILDLDNTLVPWDNP----------DATPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKL----------- 83 (175)
T ss_pred CcEEEEeccCceecccCC----------CCCHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhc-----------
Confidence 478999999999863211 1245788899999999999999998 5567777788754
Q ss_pred eeeCCCCCCchhhhhhcccCcHHHHHH-HHHHHHHhCCCCCCcEEEeeCCc-hhhHHHHHhcCCCC
Q 002531 789 VVISPDGLFPSLFREVIRRAPHEFKIA-CLEDIKKLFPSDYNPFYAGFGNR-DTDELSYRKIGIPK 852 (912)
Q Consensus 789 vLLSPd~Lf~ALrREvi~RkPe~FKie-~L~dIr~LFP~~~nPFyAGFGNR-~tDV~aYRsVGIp~ 852 (912)
.+ +.+++ .+||-..|+. +|+... + ++. + .. -.||+ -|||.+=...|+.+
T Consensus 84 -~v--~fi~~-------A~KP~~~~fr~Al~~m~-l-~~~-~-vv-mVGDqL~TDVlggnr~G~~t 134 (175)
T COG2179 84 -GV--PFIYR-------AKKPFGRAFRRALKEMN-L-PPE-E-VV-MVGDQLFTDVLGGNRAGMRT 134 (175)
T ss_pred -CC--ceeec-------ccCccHHHHHHHHHHcC-C-Chh-H-EE-EEcchhhhhhhcccccCcEE
Confidence 22 12333 3467655555 444333 2 221 2 23 36774 47888777777654
No 235
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=35.44 E-value=58 Score=33.06 Aligned_cols=38 Identities=13% Similarity=0.045 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..++.+...+.-.....+ +|||..+|+.|.+.+|+.
T Consensus 180 Kg~al~~l~~~lgi~~~~vi-~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 180 KGKAANWLKATYNQPDVKTL-GLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHHHHHHhCCCCCcEE-EECCCHHHHHHHHhCCce
Confidence 66667777666643333444 499999999999999875
No 236
>COG0020 UppS Undecaprenyl pyrophosphate synthase [Lipid metabolism]
Probab=34.80 E-value=27 Score=38.18 Aligned_cols=37 Identities=27% Similarity=0.482 Sum_probs=26.6
Q ss_pred hhhHHHHhhcccCHHHhhcCCcccccCCCeEEEeCCc-----ccchhhhhH
Q 002531 517 DAAAEAFDAHRISEDEFKSNSASIIKNENLVIRFKER-----YLTWEKAAP 562 (912)
Q Consensus 517 e~s~e~F~eh~Vsye~F~~n~p~Ii~dpnLVvrI~~k-----Yy~W~~AaP 562 (912)
+++++.|.+|..+ . -+-||+|+||-+|. |.+|+.|.-
T Consensus 170 ~I~e~~i~~~L~~-----~----~~pdpDLlIRTsGe~RlSnFllWQ~aYs 211 (245)
T COG0020 170 DIDEELISSHLYT-----S----GLPDPDLLIRTSGEQRLSNFLLWQSAYS 211 (245)
T ss_pred HcCHHHHHHhhcc-----c----CCCCCCEEEeCCCcccccccHHHHHHhC
Confidence 4666677766665 1 12399999999874 999998764
No 237
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=34.56 E-value=51 Score=36.71 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcE
Q 002531 811 EFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKI 855 (912)
Q Consensus 811 ~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RI 855 (912)
+=|..|.+.|+.-|..- +.-|++.||+..-..|-+.+++|-.||
T Consensus 213 vGK~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~l~wPFw~I 256 (274)
T TIGR01658 213 VGKLQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQAMNWPFVKI 256 (274)
T ss_pred cchHHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHhcCCCeEEe
Confidence 34999999999999642 456777999999999999999999988
No 238
>PRK10976 putative hydrolase; Provisional
Probab=34.55 E-value=39 Score=35.28 Aligned_cols=38 Identities=24% Similarity=0.202 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..|+.|...+.-....++| |||..+|+.|.+.+|+.
T Consensus 191 Kg~al~~l~~~lgi~~~~via-fGD~~NDi~Ml~~ag~~ 228 (266)
T PRK10976 191 KGHALEAVAKKLGYSLKDCIA-FGDGMNDAEMLSMAGKG 228 (266)
T ss_pred hHHHHHHHHHHcCCCHHHeEE-EcCCcccHHHHHHcCCC
Confidence 888888888766543344555 99999999999999875
No 239
>PF08924 DUF1906: Domain of unknown function (DUF1906); InterPro: IPR015020 This entry represents a family of uncharacterised hypothetical bacterial proteins. ; PDB: 1SFS_A.
Probab=34.43 E-value=18 Score=35.78 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=25.6
Q ss_pred HHHHHHHHCCCeEE--EEccChhh----hHHHHHHHHHhhhhCCCC
Q 002531 744 KLFSAIKENGYQLL--FLSARAIV----QAYLTRSFLLNLKQDGNA 783 (912)
Q Consensus 744 kLy~~I~~NGYkIL--YLSgRpig----qAd~TR~wL~~~~Q~G~~ 783 (912)
...+.|++.||+++ |||++.-. +..+|+.|+..+...|..
T Consensus 8 ~~~~~l~~aGy~~VgrYl~~~~~~~~~~~k~Lt~~e~~~i~~~Gl~ 53 (136)
T PF08924_consen 8 ASAQALKAAGYRAVGRYLSGSRGGCAMRQKNLTAGEVQDIRAAGLR 53 (136)
T ss_dssp HHHHHHHHT---SEEEESS-BTTTB-----B--HHHHHHHHHTT-E
T ss_pred HHHHHHHHCCCCEEEEEcCCCCCCcccccCCCCHHHHHHHHHCCCE
Confidence 56788999999855 99999877 459999999998776654
No 240
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=34.36 E-value=1.4e+02 Score=28.22 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=28.1
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
.+.+.+|+++++.+|..++.|+...... .++|+.+
T Consensus 48 ~p~l~~l~~~~~~~~v~~v~v~~~~~~~---~~~~~~~ 82 (146)
T PF08534_consen 48 LPYLNELQEKYKDKGVDVVGVSSDDDPP---VREFLKK 82 (146)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEESSSHH---HHHHHHH
T ss_pred hhhHHhhhhhhccCceEEEEecccCCHH---HHHHHHh
Confidence 3466788888899999999998887766 7777775
No 241
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=33.62 E-value=41 Score=34.08 Aligned_cols=39 Identities=21% Similarity=0.237 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 812 FKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 812 FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
=|-..++.+...+.-.....++ |||..+|+.|.+.+|+.
T Consensus 157 ~Kg~al~~l~~~~~i~~~~~i~-~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 157 NKGTGLKKLAELMGIDPEEVAA-IGDSENDLEMFEVAGFG 195 (230)
T ss_pred ChHHHHHHHHHHhCCCHHHEEE-ECCchhhHHHHHhcCce
Confidence 3777777777665433334555 99999999999999887
No 242
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=32.68 E-value=1.5e+02 Score=37.74 Aligned_cols=106 Identities=20% Similarity=0.163 Sum_probs=66.4
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCC-------CCCchhh-hhhcc
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPD-------GLFPSLF-REVIR 806 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd-------~Lf~ALr-REvi~ 806 (912)
.|..++++.+..+.+++.|.+++.+||-...-+..+-+= .++..+.++.-.+ .|...+. -.+..
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~--------lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA 619 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE--------VGLDAGEVLIGSDIETLSDDELANLAERTTLFA 619 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--------cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE
Confidence 588899999999999999999999999765544443322 2333222222110 0000000 02333
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhc--CCCCC
Q 002531 807 RAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKI--GIPKG 853 (912)
Q Consensus 807 RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsV--GIp~~ 853 (912)
|---+-|.+.++.+++ .+ -.+|--||..||+-|.+++ ||..+
T Consensus 620 r~sPe~K~~IV~~Lq~---~G--~vVam~GDGvNDaPALk~ADVGIAmg 663 (902)
T PRK10517 620 RLTPMHKERIVTLLKR---EG--HVVGFMGDGINDAPALRAADIGISVD 663 (902)
T ss_pred EcCHHHHHHHHHHHHH---CC--CEEEEECCCcchHHHHHhCCEEEEeC
Confidence 4333468988888886 23 2456689999999999985 77553
No 243
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=32.43 E-value=1.7e+02 Score=36.74 Aligned_cols=106 Identities=21% Similarity=0.263 Sum_probs=70.7
Q ss_pred EEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCcee
Q 002531 711 IVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVV 790 (912)
Q Consensus 711 VVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvL 790 (912)
+|++-+||.+.- -+.=.|-.++...+..++|++.|++++.|||-...-+....+=|-
T Consensus 519 ~v~va~dg~~~g--------~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lG--------------- 575 (713)
T COG2217 519 VVFVAVDGKLVG--------VIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG--------------- 575 (713)
T ss_pred EEEEEECCEEEE--------EEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---------------
Confidence 678888885442 112346678899999999999999999999987666655554331
Q ss_pred eCCCCCCchhhhhhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHh--cCCCCCc
Q 002531 791 ISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRK--IGIPKGK 854 (912)
Q Consensus 791 LSPd~Lf~ALrREvi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRs--VGIp~~R 854 (912)
+ +.. +.+. .|+ =|.+.+++++. .+ .+. +=.||..||.-+..+ |||-.+.
T Consensus 576 I--d~v----~Ael---lPe-dK~~~V~~l~~---~g-~~V-amVGDGINDAPALA~AdVGiAmG~ 626 (713)
T COG2217 576 I--DEV----RAEL---LPE-DKAEIVRELQA---EG-RKV-AMVGDGINDAPALAAADVGIAMGS 626 (713)
T ss_pred h--Hhh----eccC---CcH-HHHHHHHHHHh---cC-CEE-EEEeCCchhHHHHhhcCeeEeecC
Confidence 1 221 2221 122 28888888885 23 333 337999999998887 5776553
No 244
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=32.11 E-value=50 Score=35.06 Aligned_cols=38 Identities=11% Similarity=0.081 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCC---CCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPS---DYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~---~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..|+.|...+.- ..... +||||..+|+.|.+.+|+.
T Consensus 188 Kg~al~~l~~~lgi~~~~~~~v-iafGDs~NDi~Ml~~ag~g 228 (271)
T PRK03669 188 KDQAANWLIATYQQLSGTRPTT-LGLGDGPNDAPLLDVMDYA 228 (271)
T ss_pred HHHHHHHHHHHHHhhcCCCceE-EEEcCCHHHHHHHHhCCEE
Confidence 88888888776543 22334 4599999999999999764
No 245
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=31.09 E-value=1.7e+02 Score=37.83 Aligned_cols=29 Identities=21% Similarity=0.415 Sum_probs=26.4
Q ss_pred CCCCchHHHHHHHHHHHCCCeEEEEccCh
Q 002531 735 KDWTQSGVAKLFSAIKENGYQLLFLSARA 763 (912)
Q Consensus 735 KDWth~GVAkLy~~I~~NGYkILYLSgRp 763 (912)
+|..++||.+..+.+++.|.+++.|||-.
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~ 657 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGDK 657 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCCc
Confidence 57789999999999999999999999853
No 246
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=30.90 E-value=62 Score=37.97 Aligned_cols=65 Identities=26% Similarity=0.413 Sum_probs=47.1
Q ss_pred eeeCCCCCCchhhh------------hhcccCcHHHHHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCCCCcE
Q 002531 789 VVISPDGLFPSLFR------------EVIRRAPHEFKIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKI 855 (912)
Q Consensus 789 vLLSPd~Lf~ALrR------------Evi~RkPe~FKie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp~~RI 855 (912)
||+.-+.|+.||-+ |.|-..-.+=|..|+++|+.-|..+ ..|+++||..--..+-+++.+|-.||
T Consensus 374 VlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiGKescFerI~~RFg~K--~~yvvIgdG~eee~aAK~ln~PfwrI 450 (468)
T KOG3107|consen 374 VLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIGKESCFERIQSRFGRK--VVYVVIGDGVEEEQAAKALNMPFWRI 450 (468)
T ss_pred EEEeccchhHHHHHHHHHhcCCcccchhhhhhhhccHHHHHHHHHHHhCCc--eEEEEecCcHHHHHHHHhhCCceEee
Confidence 45555566555544 4443333344888999999999763 45667999988889999999999887
No 247
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=30.89 E-value=1.2e+02 Score=30.72 Aligned_cols=17 Identities=41% Similarity=0.614 Sum_probs=14.6
Q ss_pred CeEEEEecCCCcccccc
Q 002531 709 AKIVISDVDGTITKSDV 725 (912)
Q Consensus 709 ~KVVISDIDGTITkSDv 725 (912)
-+.||||+||||..+..
T Consensus 4 ~~~viFD~DGTL~d~~~ 20 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEV 20 (221)
T ss_pred CCEEEECCCCCCCCChH
Confidence 57999999999998753
No 248
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=30.07 E-value=52 Score=34.46 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCCC--CCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSD--YNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~--~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..++.|...+... ....++ |||..+|+.|++.+|++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~ND~~Ml~~ag~~ 216 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVG-LGDSPNDLPLLEVVDLA 216 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEE-EcCCHhhHHHHHHCCEE
Confidence 666666666554322 334555 99999999999999876
No 249
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=30.00 E-value=3.5e+02 Score=25.25 Aligned_cols=47 Identities=23% Similarity=0.345 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCC
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDG 795 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~ 795 (912)
+.+.+++..++..|..||-++.-... ..+.|.+. +.+| -|++.-++.
T Consensus 44 ~~l~~~~~~~~~~~v~vv~V~~~~~~---~~~~~~~~-----~~~~-~p~~~D~~~ 90 (149)
T cd02970 44 RALSKLLPELDALGVELVAVGPESPE---KLEAFDKG-----KFLP-FPVYADPDR 90 (149)
T ss_pred HHHHHHHHHHHhcCeEEEEEeCCCHH---HHHHHHHh-----cCCC-CeEEECCch
Confidence 46778888898899999999865442 23356653 2343 477776664
No 250
>TIGR02877 spore_yhbH sporulation protein YhbH. This protein family, typified by YhbH in Bacillus subtilis, is found in nearly every endospore-forming bacterium and in no other genome (but note that the trusted cutoff score is set high to exclude a single high-scoring sequence from Nitrosococcus oceani ATCC 19707, which is classified in the Gammaproteobacteria). The gene in Bacillus subtilis was shown to be in the regulon of the sporulation sigma factor, sigma-E, and its mutation was shown to create a sporulation defect.
Probab=29.39 E-value=34 Score=39.60 Aligned_cols=41 Identities=15% Similarity=0.190 Sum_probs=32.9
Q ss_pred EecceeeeecccccccccccccccCCccccCCCCCCccccCCCCccCCCC
Q 002531 209 SVDGHVLTAPVSASEQTTENVQLSTPQFHLGPGEGAEFCEDNGEFSSSDN 258 (912)
Q Consensus 209 s~dgh~ltap~~~~e~~~e~~ql~~p~fhlg~g~~~~~~~~~~~f~~~~~ 258 (912)
+-.|..++.||- +|..|+||.|+|...---.|||+|..|+-
T Consensus 45 ~~~~~~V~IPir---------~l~Ep~F~~g~~~~~~Vg~Gng~~~~GD~ 85 (371)
T TIGR02877 45 SDGKKKIKVPIR---------GLKEYRFRYDWNKQKRVGQGDGNEKVGDV 85 (371)
T ss_pred cCCCceEEccCC---------CCccceEEeCCCCCCeecCCCCCCCCCCC
Confidence 334566777876 57889999999988888889999988864
No 251
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=27.43 E-value=51 Score=34.48 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|...|+.|...+.-...-++| |||..+|+.|.+.+|..
T Consensus 190 K~~al~~l~~~lgi~~~~v~a-fGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 190 KGYALQRLAKLLGIKLEEVIA-FGDSTNDIEMLEVAGLG 227 (264)
T ss_pred hHHHHHHHHHHhCCCHHHeEE-eCCccccHHHHHhcCee
Confidence 888899888866544333455 99999999999998765
No 252
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=27.20 E-value=1.2e+02 Score=27.43 Aligned_cols=64 Identities=23% Similarity=0.431 Sum_probs=44.0
Q ss_pred EEEEecCC-CcccccccCc--cCCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhh
Q 002531 711 IVISDVDG-TITKSDVLGQ--FMPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNL 777 (912)
Q Consensus 711 VVISDIDG-TITkSDvlGh--ilP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~ 777 (912)
...-|+|| +++.++..|. ++-+....|. .+...+++.+++++|++|+-+|.-+.. .+++|+..+
T Consensus 8 f~l~~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~d~~~---~~~~~~~~~ 80 (124)
T PF00578_consen 8 FTLTDSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGISTDDPE---EIKQFLEEY 80 (124)
T ss_dssp EEEETTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESSSHH---HHHHHHHHH
T ss_pred cEeECCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccccccc---chhhhhhhh
Confidence 44557774 5556665552 2223455575 347788999999999999999996555 778888865
No 253
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=27.15 E-value=54 Score=32.50 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|...++.+...+.-....+++ |||..+|+.|.+.+|..
T Consensus 187 K~~ai~~l~~~~~i~~~~~~~-~GD~~ND~~Ml~~~~~~ 224 (254)
T PF08282_consen 187 KGSAIKYLLEYLGISPEDIIA-FGDSENDIEMLELAGYS 224 (254)
T ss_dssp HHHHHHHHHHHHTTSGGGEEE-EESSGGGHHHHHHSSEE
T ss_pred HHHHHHHHhhhcccccceeEE-eecccccHhHHhhcCeE
Confidence 777777777666444456666 99999999999999765
No 254
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=26.90 E-value=93 Score=32.65 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCCCCC-cEEEeeCCchhhHHHHHhcCCCC
Q 002531 813 KIACLEDIKKLFPSDYN-PFYAGFGNRDTDELSYRKIGIPK 852 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~n-PFyAGFGNR~tDV~aYRsVGIp~ 852 (912)
|-..++.+...+..... .-..+|||..+|+.|.+.+|++.
T Consensus 182 K~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v 222 (225)
T TIGR02461 182 KGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAF 222 (225)
T ss_pred HHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcE
Confidence 66666666655532111 12345999999999999998863
No 255
>cd02971 PRX_family Peroxiredoxin (PRX) family; composed of the different classes of PRXs including many proteins originally known as bacterioferritin comigratory proteins (BCP), based on their electrophoretic mobility before their function was identified. PRXs are thiol-specific antioxidant (TSA) proteins also known as TRX peroxidases and alkyl hydroperoxide reductase C22 (AhpC) proteins. They confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either TRX, glutathione, trypanothione and AhpF. They are distinct from other peroxidases in that they have no cofactors such as metals or prosthetic groups. The first step of catalysis, common to all PRXs, is the nucleophilic attack by the catalytic cysteine (also known as the peroxidatic cysteine) on the peroxide leading to cleavage of the oxygen-oxygen bond and the formation of a
Probab=26.68 E-value=4.6e+02 Score=24.32 Aligned_cols=35 Identities=11% Similarity=0.210 Sum_probs=25.6
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
.+.+.++++++...|..|+-+|.-. ....+.|+..
T Consensus 42 ~~~l~~~~~~~~~~~~~~i~is~d~---~~~~~~~~~~ 76 (140)
T cd02971 42 LCAFRDLAEEFAKGGAEVLGVSVDS---PFSHKAWAEK 76 (140)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhc
Confidence 4577888888988889999888643 3456677754
No 256
>TIGR03137 AhpC peroxiredoxin. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue.
Probab=26.45 E-value=3.3e+02 Score=27.79 Aligned_cols=53 Identities=19% Similarity=0.358 Sum_probs=32.3
Q ss_pred cccccccCc--cCCCCCCCCC------chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHH
Q 002531 720 ITKSDVLGQ--FMPLVGKDWT------QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLL 775 (912)
Q Consensus 720 ITkSDvlGh--ilP~lGKDWt------h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~ 775 (912)
++.++..|. ++-+.-.+|+ -+..++++..+++.|..||-+|.-+. ...+.|..
T Consensus 24 ~sl~d~~Gk~vvl~F~p~~~cp~C~~el~~l~~~~~~~~~~gv~vi~VS~D~~---~~~~~~~~ 84 (187)
T TIGR03137 24 VTDEDVKGKWSVFFFYPADFTFVCPTELEDLADKYAELKKLGVEVYSVSTDTH---FVHKAWHD 84 (187)
T ss_pred ecHHHHCCCEEEEEEECCCcCCcCHHHHHHHHHHHHHHHhcCCcEEEEeCCCH---HHHHHHHh
Confidence 454555553 1222234565 23677888999889999999997653 33445544
No 257
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=26.31 E-value=32 Score=41.18 Aligned_cols=27 Identities=7% Similarity=0.134 Sum_probs=18.6
Q ss_pred HHHHHHCCCeEEEEccChhhhHHHHHHHHHh
Q 002531 746 FSAIKENGYQLLFLSARAIVQAYLTRSFLLN 776 (912)
Q Consensus 746 y~~I~~NGYkILYLSgRpigqAd~TR~wL~~ 776 (912)
++.++..| +.+.+|+-|..| .+.|++.
T Consensus 102 ~~~~~~~g-~~vVVTAsPrvm---VEpFake 128 (498)
T PLN02499 102 WKVFSSCD-KRVVVTRMPRVM---VERFAKE 128 (498)
T ss_pred HHHHHcCC-eEEEEeCCHHHH---HHHHHHH
Confidence 44455778 888899887654 5566665
No 258
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.29 E-value=74 Score=36.13 Aligned_cols=55 Identities=16% Similarity=0.325 Sum_probs=41.4
Q ss_pred eEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhh
Q 002531 710 KIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQ 779 (912)
Q Consensus 710 KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q 779 (912)
..||||-||-|...+ -.-+|+++.++.|++.|-+++++|--+.- .-++|+++.+.
T Consensus 23 DtfifDcDGVlW~g~------------~~ipGs~e~l~~L~~~gK~i~fvTNNStk---sr~~y~kK~~~ 77 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLGE------------KPIPGSPEALNLLKSLGKQIIFVTNNSTK---SREQYMKKFAK 77 (306)
T ss_pred CEEEEcCCcceeecC------------CCCCChHHHHHHHHHcCCcEEEEeCCCcc---hHHHHHHHHHH
Confidence 569999999999732 23579999999999999999999975542 33455555543
No 259
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=26.22 E-value=82 Score=31.49 Aligned_cols=38 Identities=21% Similarity=0.355 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..++.+...++..... .++|||..+|..|++.+|++
T Consensus 164 K~~~~~~~~~~~~~~~~~-~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 164 KGSALQALLKELNGKRDE-ILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred hHHHHHHHHHHhCCCHHH-EEEEcCCHHHHHHHHHcCCc
Confidence 777888777665432223 44599999999999999876
No 260
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=26.06 E-value=70 Score=32.48 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|-..++.+...+.......++ |||..+|+.|.+.+|+.
T Consensus 148 K~~~i~~l~~~~~i~~~~~i~-iGDs~ND~~ml~~ag~~ 185 (215)
T TIGR01487 148 KGVGVEKLKELLGIKPEEVAA-IGDSENDIDLFRVVGFK 185 (215)
T ss_pred hHHHHHHHHHHhCCCHHHEEE-ECCCHHHHHHHHhCCCe
Confidence 777777777665433334555 99999999999999865
No 261
>PRK10856 cytoskeletal protein RodZ; Provisional
Probab=25.82 E-value=50 Score=37.36 Aligned_cols=27 Identities=19% Similarity=0.475 Sum_probs=22.9
Q ss_pred CCceEecccccccccccccEEEEEECCeeeeeeee
Q 002531 44 TPWYVRFGKFQGVLKGAEKVVRITVNGVEANFHMY 78 (912)
Q Consensus 44 sPfhVRFGk~qgvl~~~ek~V~i~VNg~~~~~~Mk 78 (912)
.||.|++|+.. .|+|++||+++++.=+
T Consensus 291 ~p~~v~iG~~~--------~v~i~~nG~~vdl~~~ 317 (331)
T PRK10856 291 APYKLKIGAPA--------AVQIQYQGKPVDLSRF 317 (331)
T ss_pred ceEEEEEcCCC--------ceEEEECCEEccCCcc
Confidence 49999999984 5799999999998744
No 262
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=24.67 E-value=84 Score=30.49 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHCCCeEEEEccChh-----hhHHHHHHHHHh
Q 002531 740 SGVAKLFSAIKENGYQLLFLSARAI-----VQAYLTRSFLLN 776 (912)
Q Consensus 740 ~GVAkLy~~I~~NGYkILYLSgRpi-----gqAd~TR~wL~~ 776 (912)
+...+++++++.+|..||-++.... .-.+..++|++.
T Consensus 42 ~~l~~l~~~~~~~~~~v~~i~~~~~~~~~~d~~~~~~~f~~~ 83 (153)
T TIGR02540 42 RALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFARR 83 (153)
T ss_pred HHHHHHHHHHhhCCeEEEEEeccccccCCCCCHHHHHHHHHH
Confidence 3666999999999999999986321 224567888863
No 263
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=24.66 E-value=78 Score=32.96 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeeCCchhhHHHHHhcCCC
Q 002531 813 KIACLEDIKKLFPSDYNPFYAGFGNRDTDELSYRKIGIP 851 (912)
Q Consensus 813 Kie~L~dIr~LFP~~~nPFyAGFGNR~tDV~aYRsVGIp 851 (912)
|...++.+...+.-.....++ |||..+|+.|.+.+|++
T Consensus 189 K~~~i~~~~~~~~~~~~~~~~-~GD~~nD~~m~~~~~~~ 226 (256)
T TIGR00099 189 KGSALQSLAEALGISLEDVIA-FGDGMNDIEMLEAAGYG 226 (256)
T ss_pred hHHHHHHHHHHcCCCHHHEEE-eCCcHHhHHHHHhCCce
Confidence 888888887765433334555 99999999999999975
No 264
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=24.11 E-value=1.9e+02 Score=30.95 Aligned_cols=29 Identities=10% Similarity=0.171 Sum_probs=23.9
Q ss_pred CCchHHHHHHHHHHHCCCeEEEEccChhh
Q 002531 737 WTQSGVAKLFSAIKENGYQLLFLSARAIV 765 (912)
Q Consensus 737 Wth~GVAkLy~~I~~NGYkILYLSgRpig 765 (912)
++.+++.+.++.++..|++++..|+.+..
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~ 148 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRY 148 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 45678999999999999999999876543
No 265
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=22.75 E-value=71 Score=37.41 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=21.1
Q ss_pred HHHHHHHHHhhhh-CCCCCCCCceeeCCCCCCc
Q 002531 767 AYLTRSFLLNLKQ-DGNALPNGPVVISPDGLFP 798 (912)
Q Consensus 767 Ad~TR~wL~~~~Q-~G~~LP~GPvLLSPd~Lf~ 798 (912)
+..+..||+.+.+ -....|..+|++.-|+-|.
T Consensus 197 a~g~~~fL~~~l~~lr~~~~~~~ILvR~DSgF~ 229 (448)
T PF13701_consen 197 AKGAAEFLKRVLRRLRQRWPDTRILVRGDSGFA 229 (448)
T ss_pred HHHHHHHHHHHHHHHhhhCccceEEEEecCccC
Confidence 4445556665432 2346899999999988764
No 266
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=22.36 E-value=1.1e+02 Score=35.48 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=49.9
Q ss_pred CCCeEEEEecCCCcccccccCccCCCCCCCCCchHHHHHHHHHHHC----CCeEEEEccChhhhHHHHHHHHHhhhhCCC
Q 002531 707 WNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVAKLFSAIKEN----GYQLLFLSARAIVQAYLTRSFLLNLKQDGN 782 (912)
Q Consensus 707 ~~~KVVISDIDGTITkSDvlGhilP~lGKDWth~GVAkLy~~I~~N----GYkILYLSgRpigqAd~TR~wL~~~~Q~G~ 782 (912)
..+-++.+||||-|-+. | -+-+|+.+.++.|.+| -.++|+||.-.-.....-.+.|.. +-|.
T Consensus 33 ~~~fgfafDIDGVL~RG----~--------~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~--~Lgv 98 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFRG----H--------RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSA--LLGV 98 (389)
T ss_pred CCceeEEEecccEEEec----C--------CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHH--hhCC
Confidence 34567999999999874 2 2246788999999988 578999997544444444445542 3566
Q ss_pred CCCCCceeeCC
Q 002531 783 ALPNGPVVISP 793 (912)
Q Consensus 783 ~LP~GPvLLSP 793 (912)
.++.--|+.+-
T Consensus 99 ~Vs~dqviqSH 109 (389)
T KOG1618|consen 99 EVSADQVIQSH 109 (389)
T ss_pred ccCHHHHHhhc
Confidence 77766666653
No 267
>KOG2423 consensus Nucleolar GTPase [General function prediction only]
Probab=21.70 E-value=3.6e+02 Score=32.42 Aligned_cols=129 Identities=20% Similarity=0.253 Sum_probs=75.2
Q ss_pred ccccCccCCC---CCCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHHHhhhhCCCCCCCCceeeCCCCCCch
Q 002531 723 SDVLGQFMPL---VGKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGNALPNGPVVISPDGLFPS 799 (912)
Q Consensus 723 SDvlGhilP~---lGKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL~~~~Q~G~~LP~GPvLLSPd~Lf~A 799 (912)
||++-|++.. +|..- ..|.+.+++=+..-+-|+.|---...-.+.|+.|++-+.+.. =.-|
T Consensus 214 SDVvvqVlDARDPmGTrc--~~ve~ylkke~phKHli~vLNKvDLVPtwvt~~Wv~~lSkey--------------PTiA 277 (572)
T KOG2423|consen 214 SDVVVQVLDARDPMGTRC--KHVEEYLKKEKPHKHLIYVLNKVDLVPTWVTAKWVRHLSKEY--------------PTIA 277 (572)
T ss_pred cceeEEeeeccCCccccc--HHHHHHHhhcCCcceeEEEeeccccccHHHHHHHHHHHhhhC--------------ccee
Confidence 6666555543 34332 236666666655556677777778888999999998664321 1224
Q ss_pred hhhhhcccCcHHHHHHHHHHHHHhCCCCCC--cEEEeeCC--chhhHHHHHhc---CC---C-----------CCcEEEE
Q 002531 800 LFREVIRRAPHEFKIACLEDIKKLFPSDYN--PFYAGFGN--RDTDELSYRKI---GI---P-----------KGKIFII 858 (912)
Q Consensus 800 LrREvi~RkPe~FKie~L~dIr~LFP~~~n--PFyAGFGN--R~tDV~aYRsV---GI---p-----------~~RIFiI 858 (912)
||...-..--.--=|.+|+++..|.++... +=|.||-| ..+.+.+.|.- .+ | ..|||.|
T Consensus 278 fHAsi~nsfGKgalI~llRQf~kLh~dkkqISVGfiGYPNvGKSSiINTLR~KkVCkvAPIpGETKVWQYItLmkrIfLI 357 (572)
T KOG2423|consen 278 FHASINNSFGKGALIQLLRQFAKLHSDKKQISVGFIGYPNVGKSSIINTLRKKKVCKVAPIPGETKVWQYITLMKRIFLI 357 (572)
T ss_pred eehhhcCccchhHHHHHHHHHHhhccCccceeeeeecCCCCchHHHHHHHhhcccccccCCCCcchHHHHHHHHhceeEe
Confidence 455422111111134467777777655432 22345665 56677777752 22 1 2699999
Q ss_pred CCCCceeec
Q 002531 859 NPKGEVAIS 867 (912)
Q Consensus 859 npkGel~~~ 867 (912)
|--|.|...
T Consensus 358 DcPGvVyps 366 (572)
T KOG2423|consen 358 DCPGVVYPS 366 (572)
T ss_pred cCCCccCCC
Confidence 988877543
No 268
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=21.42 E-value=97 Score=26.54 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=24.2
Q ss_pred EEEeeCCchhhHHHHHhcCCCCCcEEEECCCCceeec
Q 002531 831 FYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAIS 867 (912)
Q Consensus 831 FyAGFGNR~tDV~aYRsVGIp~~RIFiInpkGel~~~ 867 (912)
+...++........|.-.++| .+|+||++|+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~P--~~~l~d~~g~v~~~ 113 (116)
T cd02966 79 FPVLLDPDGELAKAYGVRGLP--TTFLIDRDGRIRAR 113 (116)
T ss_pred cceEEcCcchHHHhcCcCccc--eEEEECCCCcEEEE
Confidence 334466656666666666666 57999999998753
No 269
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=21.30 E-value=4.5e+02 Score=34.14 Aligned_cols=38 Identities=5% Similarity=0.083 Sum_probs=31.7
Q ss_pred CCCCCchHHHHHHHHHHHCCCeEEEEccChhhhHHHHH
Q 002531 734 GKDWTQSGVAKLFSAIKENGYQLLFLSARAIVQAYLTR 771 (912)
Q Consensus 734 GKDWth~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR 771 (912)
=+|..++++.+..+.+++.|.+++.+||....-|..+.
T Consensus 653 ~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA 690 (1054)
T TIGR01657 653 FENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA 690 (1054)
T ss_pred EecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 35778999999999999999999999999765555443
No 270
>PF10698 DUF2505: Protein of unknown function (DUF2505); InterPro: IPR019639 This entry represents proteins found Actinobacteria and Proteobacteria. The function is not known.
Probab=21.22 E-value=2.7e+02 Score=27.89 Aligned_cols=54 Identities=26% Similarity=0.363 Sum_probs=40.1
Q ss_pred CCCCceeeEEEEEEeeecce-eEEEEEEEeecCCCeEEEEecCCCcccccccCccCCCCCCCCC
Q 002531 676 NLKDGQNMITFSFSTRVLGT-QQVEAHLYLWKWNAKIVISDVDGTITKSDVLGQFMPLVGKDWT 738 (912)
Q Consensus 676 nLk~G~N~V~FsVtt~~qGt-~~vea~IYLW~~~~KVVISDIDGTITkSDvlGhilP~lGKDWt 738 (912)
.+..|....+|++.. .|. ..+.|++.|-+.+... ...++|++..+ +|++|+.--
T Consensus 83 ~~~~g~~~g~~~~~~--~G~P~~~~G~~~L~~~~~gt-~~~~~g~v~v~------VPlvGgkiE 137 (159)
T PF10698_consen 83 PLDDGRRTGTFTVSI--PGAPVSISGTMRLRPDGGGT-RLTVEGEVKVK------VPLVGGKIE 137 (159)
T ss_pred cCCCCeEEEEEEEEe--cCceEEEEEEEEEecCCCCE-EEEEEEEEEEE------EccccHHHH
Confidence 345677777777663 476 8889999999866554 44699999975 799988643
No 271
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=20.93 E-value=1.4e+02 Score=34.17 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=33.8
Q ss_pred chHHHHHHHHHHHCCCeEEEEccChhhhHHHHHHHH
Q 002531 739 QSGVAKLFSAIKENGYQLLFLSARAIVQAYLTRSFL 774 (912)
Q Consensus 739 h~GVAkLy~~I~~NGYkILYLSgRpigqAd~TR~wL 774 (912)
.+|+.+++++++++|+++..+|+.+...++....+|
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l 221 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYL 221 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 579999999999999999999999999999888887
Done!