BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002535
(911 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D5USX8|MSHA_TSUPD D-inositol 3-phosphate glycosyltransferase OS=Tsukamurella
paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117
/ NBRC 16120 / NCTC 13040) GN=mshA PE=3 SV=1
Length = 438
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 324 VRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILS 383
R ++G PD+LV+ VG ++ L+LRA PL + + I+++++
Sbjct: 223 ARRELGIAPDELVLTFVGRIQPHKA----PDLLLRAAAPL-----IHAHPDRRIRILVVG 273
Query: 384 GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE-----GDVDSVLNTADVVIYGSFLEEQTF 438
G S + IA L LG+ + E + V +D+V+ S+ E +F
Sbjct: 274 GPSGTGLERPDALIA--LARELGIEHAVTFEPPRPPAGLAEVYRASDLVVVPSYSE--SF 329
Query: 439 PEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKI 494
+ V+A P++A + + V D V+G L + + T ++ ++ N ++
Sbjct: 330 GLVAVEAQACGTPVVAAKVGGLSVAVADGVSGRLIDGHDPQEWTAVLDELTANAEL 385
>sp|D5UJ42|MSHA_CELFN D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas
flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS
134) GN=mshA PE=3 SV=1
Length = 443
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 363 LFSEVSVENESNSPIKVMILSGDSTSNYSVVIEAIAHNLHYPLGV-----VKHMAAEGDV 417
L V V S P+ ++++ G + + V E A L LGV V+ A ++
Sbjct: 276 LVQAVGVLRASGRPVPLLVVLGGPSGRPTAVRELRA--LAVTLGVDDDVVVRPPAPRDEL 333
Query: 418 DSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKEN 477
S AD+V S ++F + V+A P++A D+ +R V+D V+G L P +
Sbjct: 334 VSWYRAADLVAMPS--RSESFGLVAVEAQASGTPVLAADVGGLRTVVEDDVSGRLVPGHD 391
Query: 478 IKALTHIILQVI 489
+ +I +
Sbjct: 392 PQVWAEVIADAL 403
>sp|Q9N4M4|ANC1_CAEEL Nuclear anchorage protein 1 OS=Caenorhabditis elegans GN=anc-1 PE=1
SV=3
Length = 8545
Score = 35.4 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 42/159 (26%)
Query: 526 ENVLKLPSEVA-FPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQIELLQS 584
E+V+ L S + P + ELSP FEA +N +LLQ
Sbjct: 1474 ESVMSLTSSIGVIPADVAELSP----------FEAKIN-----------------KLLQK 1506
Query: 585 NHTERDSYLPVPETDDSFLYDIWKEEK----------DIEMLNVRKRREEEELKDRIDQS 634
H DSYL P+ D+ D+ + EK + N+ E+E LK R
Sbjct: 1507 LHIIEDSYLKGPKPIDTVREDVKQLEKYRNRGAEILQQLSTSNIED-AEKEGLKHRFVLM 1565
Query: 635 HGTWDEVYRSAKRADRAKNDLHERDE---GELERTGQPL 670
+D++ RS + R N+L +++ EL Q L
Sbjct: 1566 LNNYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTL 1604
>sp|O07147|PIMA_MYCLE GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol
mannosyltransferase OS=Mycobacterium leprae (strain TN)
GN=pimA PE=3 SV=1
Length = 374
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 406 GVVKHMAAEGDVD-----SVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNI 460
G+V+H+ G VD + + +ADV + E +F +LV+A+ P++A DL
Sbjct: 240 GLVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGE-SFGIVLVEAMAAGTPVVASDLDAF 298
Query: 461 RKYVDDRVNGYLFPKEN 477
R+ + D G+L P +
Sbjct: 299 RRVLRDGEVGHLVPAGD 315
>sp|Q9UPY6|WASF3_HUMAN Wiskott-Aldrich syndrome protein family member 3 OS=Homo sapiens
GN=WASF3 PE=1 SV=2
Length = 502
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 598 TDDSFLYDIWKEE--KDIEMLNVRKRREEEELKDRIDQSHGTWDEVYRSAKRADRAKNDL 655
TD S+ +D+WKE+ +D E KRR++E+ RID GT EV K+ +A+N
Sbjct: 152 TDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQ--KRID---GTTREV----KKVRKARNRR 202
Query: 656 HE 657
E
Sbjct: 203 QE 204
>sp|Q4A5V9|SYG_MYCS5 Glycine--tRNA ligase OS=Mycoplasma synoviae (strain 53) GN=glyQS
PE=3 SV=1
Length = 451
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 448 FRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRR 507
F P+I ++N ++Y D+V LFP EN+ +TH +Q ++ + + +
Sbjct: 84 FNDPLIENKINN-KRYRADKVIEELFPNENVAKMTHEQMQEFLQKNVTSYDNSKCAWSEI 142
Query: 508 SVKNLMALETIEG 520
NLM ET +G
Sbjct: 143 KKFNLM-FETFQG 154
>sp|Q14831|GRM7_HUMAN Metabotropic glutamate receptor 7 OS=Homo sapiens GN=GRM7 PE=1 SV=1
Length = 915
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 716 LLNNPYYRDIL-----GEYGAFFAIANRIDRLHKNAWIGFQSWRATANKVSLSR-IAENA 769
LL+ P R ++ + A A R D++ W+G SW + N + IAE A
Sbjct: 274 LLDTPNSRAVVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGA 333
Query: 770 LVDAIQARR---HGDALYFWVR-MDVDSRNPLRQDFWSFCDAINAGNCKVTFSESLK 822
+ IQ +R G YF R ++ + RN ++W NCK+T S S K
Sbjct: 334 IT--IQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWE-----ENFNCKLTISGSKK 383
>sp|Q68ED2|GRM7_MOUSE Metabotropic glutamate receptor 7 OS=Mus musculus GN=Grm7 PE=1 SV=1
Length = 915
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 716 LLNNPYYRDIL-----GEYGAFFAIANRIDRLHKNAWIGFQSWRATANKVSLSR-IAENA 769
LL+ P R ++ + A A R D++ W+G SW + N + IAE A
Sbjct: 274 LLDTPNSRAVVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGA 333
Query: 770 LVDAIQARR---HGDALYFWVR-MDVDSRNPLRQDFWSFCDAINAGNCKVTFSESLK 822
+ IQ +R G YF R ++ + RN ++W NCK+T S S K
Sbjct: 334 IT--IQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWE-----ENFNCKLTISGSKK 383
>sp|P35400|GRM7_RAT Metabotropic glutamate receptor 7 OS=Rattus norvegicus GN=Grm7 PE=1
SV=1
Length = 915
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 716 LLNNPYYRDIL-----GEYGAFFAIANRIDRLHKNAWIGFQSWRATANKVSLSR-IAENA 769
LL+ P R ++ + A A R D++ W+G SW + N + IAE A
Sbjct: 274 LLDTPNSRAVVIFANDEDIKQILAAAKRADQVGHFLWVGSDSWGSKINPLHQHEDIAEGA 333
Query: 770 LVDAIQARR---HGDALYFWVR-MDVDSRNPLRQDFWSFCDAINAGNCKVTFSESLK 822
+ IQ +R G YF R ++ + RN ++W NCK+T S S K
Sbjct: 334 IT--IQPKRATVEGFDAYFTSRTLENNRRNVWFAEYWE-----ENFNCKLTISGSKK 383
>sp|Q8S403|PHO1_ARATH Phosphate transporter PHO1 OS=Arabidopsis thaliana GN=PHO1 PE=2
SV=1
Length = 782
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 542 KELSPKLKEEWQWHLFEAFLN------STHEDRTSRSNRFLNQIELLQSNHTERDSYLPV 595
KEL +L EW+ EAF+N + +TSR + + + + R + PV
Sbjct: 6 KELEAQLIPEWK----EAFVNYCLLKKQIKKIKTSRKPKPASHYPIGHHSDFGRSLFDPV 61
Query: 596 PETDDSFLYDIWKEEKDIEMLNVRKRREEEELKDRIDQSHGT--------WDEVYRSAKR 647
+ +F ++ + E+L VR+RR E D +D+ + T DEV R
Sbjct: 62 RKLARTFSDKLFSNSEKPEILQVRRRRGSSETGDDVDEIYQTELVQLFSEEDEVKVFFAR 121
Query: 648 ADR---AKNDLHERDEGELERTGQPL 670
D N H+ E E G+ L
Sbjct: 122 LDEELNKVNQFHKPKETEFLERGEIL 147
>sp|Q46638|AMSK_ERWAM Amylovoran biosynthesis glycosyltransferase AmsK OS=Erwinia
amylovora GN=amsK PE=3 SV=2
Length = 407
Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 416 DVDSVLNTADVVIYGSFL----EEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGY 471
++ L+ AD+ + S + + P L++A+ P+++ + S I + ++ V+G+
Sbjct: 292 EIKRYLDEADIFLLPSLTAADGDMEGIPVALMEAMAVGLPVVSSEHSGIPELIEHNVSGW 351
Query: 472 LFPKENIKALTHIILQV 488
L P+ + +AL I+L++
Sbjct: 352 LAPEGDAQALAAILLRL 368
>sp|Q4R4N5|STMN3_MACFA Stathmin-3 OS=Macaca fascicularis GN=STMN3 PE=2 SV=1
Length = 180
Score = 33.1 bits (74), Expect = 10.0, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 475 KENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPSE 534
KE +K L+ + L + + P I G VK L + + + E +LK PS+
Sbjct: 9 KEKMKELSVLSL-ICSCFYTQPHPNTIYQYGDMEVKQLDKRASGQSF----EVILKSPSD 63
Query: 535 VAFPKSIKELSPKLKEEWQWHLFEAFLNSTHEDRTSRSNRFLNQI--------ELLQSNH 586
++ P+S SP K++ + L + E R ++ + L Q+ E+L
Sbjct: 64 LS-PESPMLSSPPKKKDTSLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKAL 122
Query: 587 TERDSYLPVPETDDSFLYDIWKEEKDIEMLNVRKRREEEEL 627
E +++ E ++ ++ KE ++ + +R+R E+EL
Sbjct: 123 EENNNFSRQAEEKLNYKMELSKEIREAHLAALRERLREKEL 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,785,672
Number of Sequences: 539616
Number of extensions: 14857109
Number of successful extensions: 36199
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 36164
Number of HSP's gapped (non-prelim): 67
length of query: 911
length of database: 191,569,459
effective HSP length: 127
effective length of query: 784
effective length of database: 123,038,227
effective search space: 96461969968
effective search space used: 96461969968
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)