Query 002535
Match_columns 911
No_of_seqs 366 out of 1804
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 16:48:25 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002535.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1253-1256//hhsearch_pdb/002535hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 1.0 1 1 317.4 33.7 363 143-531 1-433 (439)
2 2r60_A Glycosyl transferase, g 1.0 1 1 312.3 33.6 374 143-535 6-466 (499)
3 3okp_A GDP-mannose-dependent a 1.0 1 1 306.7 31.1 360 143-538 3-389 (394)
4 3c48_A Predicted glycosyltrans 1.0 1 1 305.6 37.0 380 136-533 12-430 (438)
5 2jjm_A Glycosyl transferase, g 1.0 1 1 305.5 31.1 365 134-532 5-389 (394)
6 2x6q_A Trehalose-synthase TRET 1.0 1 1 302.3 35.8 354 141-529 37-415 (416)
7 3s28_A Sucrose synthase 1; gly 1.0 1 1 300.4 31.2 367 143-529 277-770 (816)
8 1rzu_A Glycogen synthase 1; gl 1.0 1 1 299.1 29.7 363 145-534 1-481 (485)
9 2qzs_A Glycogen synthase; glyc 1.0 1 1 298.5 32.4 361 145-532 1-480 (485)
10 2iw1_A Lipopolysaccharide core 1.0 1 1 292.7 22.2 351 145-530 1-373 (374)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=317.44 Aligned_cols=363 Identities=15% Similarity=0.149 Sum_probs=277.1
Q ss_pred CCCEEEEEECCC---CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH------------------HHCCCEEEEE
Q ss_conf 997799992899---9993999999999999988996999991998422445------------------4059118980
Q 002535 143 RKPQLALVFPDL---LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW------------------RNIGVPVAIL 201 (911)
Q Consensus 143 rk~rIalI~~~L---~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~~~------------------~~~gi~v~~l 201 (911)
|++||+++.+.. ..||.+.++..+++.|.+.||+|.|++...+...... ...++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEE
T ss_conf 95289999502177666889999999999999779859998367788236552463014765310243125788408993
Q ss_pred CC----------------C-------HHHHHHHH-----HCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHH
Q ss_conf 45----------------3-------36898642-----03964999958632689999862789999899999181136
Q 002535 202 QT----------------G-------REKASFVN-----WLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLA 253 (911)
Q Consensus 202 ~~----------------~-------~~l~~lI~-----~~kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI~tiH~~~L~ 253 (911)
+. . ......++ ..+||+||+|.+... .+..++.+ ..++|+|+++|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~~~~~~~-~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIKK-YFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HHHHHHHH-HHCCCEEEEESCCCCC
T ss_pred CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH-HHHHHHHH-CCCCCEEEEECCCCCC
T ss_conf 532205212466776300232578999999999997444799819994640343-45898865-2699789996534445
Q ss_pred ---HHH-HHHHHH--CCHHHHHHHHHHHHHCCEEEECCCCCCCCCC---CCCCCCEEEECCCCCCCCCCCCCC-----CH
Q ss_conf ---779-988730--1026675589998623468705886211013---579998899189998965445468-----40
Q 002535 254 ---TRA-RNYASS--GQLELLNDWKKVFNRATVVVFPDYVLPMMYS---AFDAGNYYVIPGSPAKAWEADTNM-----DL 319 (911)
Q Consensus 254 ---~~l-~k~~~~--~~d~iIs~~~~~~~~a~~vvfpn~~l~ii~~---~id~~ki~VIpg~gVD~~~f~~~~-----~~ 319 (911)
... ...... ............+..++.+++.+........ .....++.+||+ |+|...|.+.. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~n-gvd~~~~~~~~~~~~~~~ 237 (439)
T 3fro_A 159 KLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFN-GIDCSFWNESYLTGSRDE 237 (439)
T ss_dssp CEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCC-CCCTTTSCGGGSCSCHHH
T ss_pred CCCHHHHCCCCCCCCCCCCEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCEEECCC-CCCCHHCCCCCCCCHHHH
T ss_conf 6856774745510035666320766655434588726898999986056504773453478-888043084322110456
Q ss_pred HHHHHHHHHCCCCCCEEEEEEEECCC-CCCCCCCHHHHHHHHHHHHHHC--CCCCCCCCCEEEEEEE-CCCCCCHHHHHH
Q ss_conf 03899986099999969999970033-2234332999999999804410--4477899987999992-999984289999
Q 002535 320 YNDTVRVKMGFKPDDLVIAIVGTQFM-YRGLWLEHALILRALLPLFSEV--SVENESNSPIKVMILS-GDSTSNYSVVIE 395 (911)
Q Consensus 320 ~k~~lR~~lgl~~d~~vIL~VGsrl~-~~KGiKg~dlLIeAl~~L~~~~--p~~~~~~~~vkLvIVG-G~~~e~Y~~~Le 395 (911)
.+..++++++++++ ++++++| ++. +. ||++.+++|+..+.++. ++ ++|+|+| |+ +.|...++
T Consensus 238 ~~~~~~~~~~~~~~-~~i~~~G-~~~~~~---Kg~~~li~a~~~l~~~~~~~~-------~~l~i~G~g~--~~~~~~l~ 303 (439)
T 3fro_A 238 RKKSLLSKFGMDEG-VTFMFIG-RFDRGQ---KGVDVLLKAIEILSSKKEFQE-------MRFIIIGKGD--PELEGWAR 303 (439)
T ss_dssp HHHHHHHHHTCCSC-EEEEEEC-CSSCTT---BCHHHHHHHHHHHHTSGGGGG-------EEEEEECCCC--HHHHHHHH
T ss_pred HHHHHHHHCCCCCC-CEEEEEC-CCCCCC---CCHHHHHHHHHHHHHCCCCCC-------EEEEEECCCC--HHHHHHHH
T ss_conf 69999997399998-4799973-335343---669999999999985466787-------1899980797--26778999
Q ss_pred HHHHHCCCCCCCEEECCCC--CCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEE
Q ss_conf 9999849999529992560--00999997747568825677688559999999909979964887631121358508998
Q 002535 396 AIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLF 473 (911)
Q Consensus 396 ~la~~lgL~~~~V~flG~v--~dV~~lL~~ADVfIlPS~~E~qGFplvLLEAMA~GlPVIaTd~gGi~EiV~dg~nGlLV 473 (911)
+++++++ + .+.+.|++ +++..+|+.||++|+||..| |||++++|||+||+|||+++.+|++|++.++ +|+++
T Consensus 304 ~~~~~~~--~-~~~~~g~~~~~~~~~~~~~adv~v~ps~~e--~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~ 377 (439)
T 3fro_A 304 SLEEKHG--N-VKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV 377 (439)
T ss_dssp HHHHHCT--T-EEEECSCCCHHHHHHHHTTCSEEEECBSCC--SSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE
T ss_pred HHHHHCC--C-EEEECCCCCHHHHHHHHHHCCEEEECCCCC--CCCHHHHHHHHCCCCEEECCCCCCCEEEECC-CEEEE
T ss_conf 9875069--8-999728799889999999779999589878--8618999999779976973788743168758-44896
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
Q ss_conf 39999999999999998-59990899999999999998139999999999999997539
Q 002535 474 PKENIKALTHIILQVIT-NGKISPFARNIASIGRRSVKNLMALETIEGYAMLLENVLKL 531 (911)
Q Consensus 474 ~~~D~eaLAeaI~~LLs-d~~~p~~~~klg~~ar~~ve~Fs~e~ia~~y~~Lle~iL~~ 531 (911)
+++|+++++++|.++++ + ++.+.+|++++++.+++|+|+.++++|.++|+++++.
T Consensus 378 ~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 378 KAGDPGELANAILKALELS---RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp CTTCHHHHHHHHHHHHHHT---TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred CCCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 8899899999999998319---9999999999999876472999999999999999975
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=312.27 Aligned_cols=374 Identities=14% Similarity=0.111 Sum_probs=279.3
Q ss_pred CCCEEEEEECCC-------------CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH-HH----HH----HCCCEEEE
Q ss_conf 997799992899-------------9993999999999999988996999991998422-44----54----05911898
Q 002535 143 RKPQLALVFPDL-------------LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAH-EV----WR----NIGVPVAI 200 (911)
Q Consensus 143 rk~rIalI~~~L-------------~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~-~~----~~----~~gi~v~~ 200 (911)
+++||+++.+.. ..||++.++..+++.|.+.||+|.|++....... .. .. ..++++..
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 85 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVR 85 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEE
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEE
T ss_conf 45249999657774434423478888799433499999999855984899957887233651135677506789817998
Q ss_pred ECCC------------------HHHHHHHHH--CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHH---
Q ss_conf 0453------------------368986420--39649999586326899998627899998999991811367799---
Q 002535 201 LQTG------------------REKASFVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRAR--- 257 (911)
Q Consensus 201 l~~~------------------~~l~~lI~~--~kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI~tiH~~~L~~~l~--- 257 (911)
++.. ..+...++. .+||+||+|.... ..++.++.+ ..++|+|++.|+........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~-~~~~~~~~~-~~~~p~v~~~H~~~~~~~~~~~~ 163 (499)
T 2r60_A 86 IPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDG-GLAGVLLKN-IKGLPFTFTGHSLGAQKMEKLNV 163 (499)
T ss_dssp ECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHH-HHCCCEEEECSSCHHHHHHTTCC
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC-HHHHHHHHH-HCCCCEEEECCCCCCCCCHHHCC
T ss_conf 2577767768899999899999999999985389988899757862-079999887-35996899806840011134414
Q ss_pred ------HHHHHC-CHHHHHHHHHHHHHCCEEEECCCCCCCC--C---CC-C----CCCCEEEECCCCCCCCCCCCCCCHH
Q ss_conf ------887301-0266755899986234687058862110--1---35-7----9998899189998965445468400
Q 002535 258 ------NYASSG-QLELLNDWKKVFNRATVVVFPDYVLPMM--Y---SA-F----DAGNYYVIPGSPAKAWEADTNMDLY 320 (911)
Q Consensus 258 ------k~~~~~-~d~iIs~~~~~~~~a~~vvfpn~~l~ii--~---~~-i----d~~ki~VIpg~gVD~~~f~~~~~~~ 320 (911)
...... ........+..++.++.+++.+...... . .+ + ...++.+||+ |+|...|.+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~n-gvd~~~~~~~~~~~ 242 (499)
T 2r60_A 164 NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPP-GVNTRVFDGEYGDK 242 (499)
T ss_dssp CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCC-CBCTTTSSSCCCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEECC-CCCHHHCCCCCHHH
T ss_conf 78776124556788899999999984689999888899999986412464223467887699879-95866568641035
Q ss_pred -HHHHHHHHC-----CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC-CCC------
Q ss_conf -389998609-----9999969999970033223433299999999980441044778999879999929-999------
Q 002535 321 -NDTVRVKMG-----FKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSG-DST------ 387 (911)
Q Consensus 321 -k~~lR~~lg-----l~~d~~vIL~VGsrl~~~KGiKg~dlLIeAl~~L~~~~p~~~~~~~~vkLvIVGG-~~~------ 387 (911)
+..++++++ ++++.++++++| ++.+. ||++.+++|+..+.++.++ .++++|+|+ +..
T Consensus 243 ~~~~~r~~~~~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l~~~~~~------~~~l~i~G~~~~~~~~y~~ 312 (499)
T 2r60_A 243 IKAKITKYLERDLGSERMELPAIIASS-RLDQK---KNHYGLVEAYVQNKELQDK------ANLVLTLRGIENPFEDYSR 312 (499)
T ss_dssp HHHHHHHHHHHHSCGGGTTSCEEEECS-CCCGG---GCHHHHHHHHHTCHHHHHH------CEEEEEESSCSBTTTBCTT
T ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEEE-CCCCC---CCHHHHHHHHHHHHHHCCC------CEEEEEECCCCCCCCCCCC
T ss_conf 678999883643345688876899960-68501---5889999999999873888------6599998788875322111
Q ss_pred -----CCHHHHHHHHHHHCCCCCCCEEECCCC--CCHHHHHHHC----CEEEECCCCCCCCCCHHHHHHHHCCCCEEECC
Q ss_conf -----842899999999849999529992560--0099999774----75688256776885599999999099799648
Q 002535 388 -----SNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTA----DVVIYGSFLEEQTFPEILVKALCFRKPIIAPD 456 (911)
Q Consensus 388 -----e~Y~~~Le~la~~lgL~~~~V~flG~v--~dV~~lL~~A----DVfIlPS~~E~qGFplvLLEAMA~GlPVIaTd 456 (911)
..|.+.++++++++++.+ +|.|+|++ +++..+|+.| |++|+||..| |||++++|||+||+|||+++
T Consensus 313 l~~~~~~y~~~l~~~~~~~~l~~-~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~E--g~~~~~lEAma~G~PvI~s~ 389 (499)
T 2r60_A 313 AGQEEKEILGKIIELIDNNDCRG-KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYE--PFGLAPVEAMASGLPAVVTR 389 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCBT-TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCB--CCCSHHHHHHHTTCCEEEES
T ss_pred CCCCCHHHHHHHHHHHHHCCCCC-EEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCC--CCCCHHHHHHHCCCCEEEEC
T ss_conf 13201479999999998649986-0998788998999999995576798899786458--97968999997699889816
Q ss_pred CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8763112135850899839999999999999998599908999999999999981-399999999999999975399977
Q 002535 457 LSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSVKN-LMALETIEGYAMLLENVLKLPSEV 535 (911)
Q Consensus 457 ~gGi~EiV~dg~nGlLV~~~D~eaLAeaI~~LLsd~~~p~~~~klg~~ar~~ve~-Fs~e~ia~~y~~Lle~iL~~p~~~ 535 (911)
.+|++|++.++.+|++++++|+++++++|.++++| ++.+.+|++++++.+++ |+|+.++++|.++|++++......
T Consensus 390 ~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~~ 466 (499)
T 2r60_A 390 NGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES---EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEE 466 (499)
T ss_dssp SBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC---HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88778873478607995899999999999999869---999999999999999875799999999999999987321332
No 3
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=306.72 Aligned_cols=360 Identities=13% Similarity=0.121 Sum_probs=281.1
Q ss_pred CCCEEEEEECCCC--CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCC--HHHHHHCCCEEEEECCC---------HHHHH
Q ss_conf 9977999928999--99399999999999998899699999199842--24454059118980453---------36898
Q 002535 143 RKPQLALVFPDLL--IDPQQLQMVTIAIALREIGYAIQVYSLEDGRA--HEVWRNIGVPVAILQTG---------REKAS 209 (911)
Q Consensus 143 rk~rIalI~~~L~--~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~--~~~~~~~gi~v~~l~~~---------~~l~~ 209 (911)
+++||+++.+.+. .||.+..+..+++.| .||+|.|++...... .......++.+..++.. ..+..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAE 80 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 886699992766886551999999999985--697689997788864244433456628998456545555146999999
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCC-EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCC
Q ss_conf 642039649999586326899998627899998-9999918113677998873010266755899986234687058862
Q 002535 210 FVNWLNYDGILVNSLEAKVVISNIMQEPFKSLP-LVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPDYVL 288 (911)
Q Consensus 210 lI~~~kpDIIhvhs~~~~~~ia~Ll~~~~~giP-vI~tiH~~~L~~~l~k~~~~~~d~iIs~~~~~~~~a~~vvfpn~~l 288 (911)
+++..++|+||+|+......+..++. ..++| +|++.|+........ .......+..++.++.+++.+...
T Consensus 81 ~~~~~~~Dvv~~~~~~~~~~~~~~~~--~~~~~~~i~~~h~~~~~~~~~-------~~~~~~~~~~~~~~d~ii~~s~~~ 151 (394)
T 3okp_A 81 IIREREIDNVWFGAAAPLALMAGTAK--QAGASKVIASTHGHEVGWSML-------PGSRQSLRKIGTEVDVLTYISQYT 151 (394)
T ss_dssp HHHHTTCSEEEESSCTTGGGGHHHHH--HTTCSEEEEECCSTHHHHTTS-------HHHHHHHHHHHHHCSEEEESCHHH
T ss_pred HHHHCCCCEEEECCCCHHHHHHHHHH--HCCCCCEEEEECCCHHHHHHC-------CHHHHHHHHHHHHCCEEEECCHHH
T ss_conf 98763898899888544889999997--518981999934642333212-------203489999998679799768899
Q ss_pred CCC--CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 110--135799988991899989654454684003899986099999969999970033223433299999999980441
Q 002535 289 PMM--YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFSE 366 (911)
Q Consensus 289 ~ii--~~~id~~ki~VIpg~gVD~~~f~~~~~~~k~~lR~~lgl~~d~~vIL~VGsrl~~~KGiKg~dlLIeAl~~L~~~ 366 (911)
... .......++.+||+ |+|...+.+.....+...+++++++++.++++++| ++.+. ||++.+++|+..+.++
T Consensus 152 ~~~~~~~~~~~~~~~vi~n-gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---Kg~~~li~a~~~l~~~ 226 (394)
T 3okp_A 152 LRRFKSAFGSHPTFEHLPS-GVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNS-RLVPR---KGQDSLIKAMPQVIAA 226 (394)
T ss_dssp HHHHHHHHCSSSEEEECCC-CBCTTTSCCCCHHHHHHHHHHTTCCTTCCEEEEES-CSCGG---GCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCEEEECC-CCCHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEE-CCCCC---CCHHHHHHHHHHHHHH
T ss_conf 9999984189998588369-85888758877214689998649985766999976-44134---5887999999998861
Q ss_pred CCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCCEEECCCC--CCHHHHHHHCCEEEECCCC-------CCC
Q ss_conf 04477899987999992-9999842899999999849999529992560--0099999774756882567-------768
Q 002535 367 VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GDVDSVLNTADVVIYGSFL-------EEQ 436 (911)
Q Consensus 367 ~p~~~~~~~~vkLvIVG-G~~~e~Y~~~Le~la~~lgL~~~~V~flG~v--~dV~~lL~~ADVfIlPS~~-------E~q 436 (911)
.++ ++|+|+| |+.. ..+++++ .++.+ +|.++|++ +++..+|+.||++|+||.. |
T Consensus 227 ~~~-------~~l~i~G~g~~~----~~l~~~~--~~~~~-~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e-- 290 (394)
T 3okp_A 227 RPD-------AQLLIVGSGRYE----STLRRLA--TDVSQ-NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE-- 290 (394)
T ss_dssp STT-------CEEEEECCCTTH----HHHHHHT--GGGGG-GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCC--
T ss_pred CCC-------EEEEEECCCHHH----HHHHHHH--HCCCC-EEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCC--
T ss_conf 898-------699998686479----9999987--55457-2999078997899999986899994575556665655--
Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHCCHH
Q ss_conf 8559999999909979964887631121358508998399999999999999985999089999999999999-813999
Q 002535 437 TFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMAL 515 (911)
Q Consensus 437 GFplvLLEAMA~GlPVIaTd~gGi~EiV~dg~nGlLV~~~D~eaLAeaI~~LLsd~~~p~~~~klg~~ar~~v-e~Fs~e 515 (911)
|||++++|||++|+|||+++.++..|++.++ +|++++++|+++++++|.++++| ++.+.+|++++++.+ ++|+|+
T Consensus 291 ~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 291 GLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDD---PIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp SSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHTBHH
T ss_pred CCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHCCHH
T ss_conf 5673999999759979993899737787468-85672899999999999999819---9999999999999998747999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999999975399977898
Q 002535 516 ETIEGYAMLLENVLKLPSEVAFP 538 (911)
Q Consensus 516 ~ia~~y~~Lle~iL~~p~~~~~p 538 (911)
.++++|.++|+++.........|
T Consensus 367 ~~~~~~~~~~~~~~r~~~~~~~~ 389 (394)
T 3okp_A 367 IMGERLTNILQSEPRKLAAALEH 389 (394)
T ss_dssp HHHHHHHHHHHSCCC--------
T ss_pred HHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99999999999720376134443
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=305.59 Aligned_cols=380 Identities=14% Similarity=0.144 Sum_probs=280.4
Q ss_pred CCCCCCCCCCEEEEEECCC---------CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH--HHHCCCEEEEECCC
Q ss_conf 5568899997799992899---------999399999999999998899699999199842244--54059118980453
Q 002535 136 KLHRFGYRKPQLALVFPDL---------LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEV--WRNIGVPVAILQTG 204 (911)
Q Consensus 136 ~~~r~~~rk~rIalI~~~L---------~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~~--~~~~gi~v~~l~~~ 204 (911)
+-..-+.+++||+++.... ..||.+.++..+++.|.+.||+|.+++......... ....++.+..++..
T Consensus 12 ~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~ 91 (438)
T 3c48_A 12 SGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAG 91 (438)
T ss_dssp -------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCS
T ss_pred CCCCCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 67665700203345775325634678788787999999999999966997999954788777540025687489992478
Q ss_pred -----------HH-------HHHH-HHHC-CCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHH--HHHHHHH
Q ss_conf -----------36-------8986-4203-96499995863268999986278999989999918113677--9988730
Q 002535 205 -----------RE-------KASF-VNWL-NYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATR--ARNYASS 262 (911)
Q Consensus 205 -----------~~-------l~~l-I~~~-kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI~tiH~~~L~~~--l~k~~~~ 262 (911)
.. +... ++.. +||+||+|.... ..++.++.+ ..++|+|++.|+...... .......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~-~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~ 169 (438)
T 3c48_A 92 PYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLS-GQVGWLLRD-LWRIPLIHTAHTLAAVKNSYRDDSDTP 169 (438)
T ss_dssp CSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHH-HHHHHHHHH-HHTCCEEEECSSCHHHHSCC----CCH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCH-HHHHHHHHH-HCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 754323667789999999999999984168999899477557-899999999-749998999427740111110026773
Q ss_pred CCHHHHHHHHHHHHHCCEEEECCCCCCCC---CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 10266755899986234687058862110---135799988991899989654454684003899986099999969999
Q 002535 263 GQLELLNDWKKVFNRATVVVFPDYVLPMM---YSAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAI 339 (911)
Q Consensus 263 ~~d~iIs~~~~~~~~a~~vvfpn~~l~ii---~~~id~~ki~VIpg~gVD~~~f~~~~~~~k~~lR~~lgl~~d~~vIL~ 339 (911)
............++.++.+++.+...... ..+++..++.+||+ |+|...+.+.....+...+++++++++.+++++
T Consensus 170 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~n-gvd~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 248 (438)
T 3c48_A 170 ESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSP-GADVELYSPGNDRATERSRRELGIPLHTKVVAF 248 (438)
T ss_dssp HHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCC-CCCTTTSCCC----CHHHHHHTTCCSSSEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCHHHEEEECC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
T ss_conf 1578999999998408999984799999999985898202688269-766110478662024566886089989848999
Q ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEC-CCCCCHHHHHHHHHHHCCCCCCCEEECCCC--CC
Q ss_conf 970033223433299999999980441044778999879999929-999842899999999849999529992560--00
Q 002535 340 VGTQFMYRGLWLEHALILRALLPLFSEVSVENESNSPIKVMILSG-DSTSNYSVVIEAIAHNLHYPLGVVKHMAAE--GD 416 (911)
Q Consensus 340 VGsrl~~~KGiKg~dlLIeAl~~L~~~~p~~~~~~~~vkLvIVGG-~~~e~Y~~~Le~la~~lgL~~~~V~flG~v--~d 416 (911)
+| ++.+. ||++.+++|+..+.++.|+ .+++|+|+|+ .....+.+.++++++++++.+ +|.|+|++ ++
T Consensus 249 ~G-~~~~~---Kg~~~li~a~~~l~~~~p~-----~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~-~v~~~g~~~~~~ 318 (438)
T 3c48_A 249 VG-RLQPF---KGPQVLIKAVAALFDRDPD-----RNLRVIICGGPSGPNATPDTYRHMAEELGVEK-RIRFLDPRPPSE 318 (438)
T ss_dssp ES-CBSGG---GCHHHHHHHHHHHHHHCTT-----CSEEEEEECCBC------CHHHHHHHHTTCTT-TEEEECCCCHHH
T ss_pred EE-EECCC---CCHHHHHHHHHHHHHHCCC-----CCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC-CEEECCCCCHHH
T ss_conf 74-31566---7989999999999963977-----66699998188877727899999999719878-689858898588
Q ss_pred HHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf 99999774756882567768855999999990997996488763112135850899839999999999999998599908
Q 002535 417 VDSVLNTADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISP 496 (911)
Q Consensus 417 V~~lL~~ADVfIlPS~~E~qGFplvLLEAMA~GlPVIaTd~gGi~EiV~dg~nGlLV~~~D~eaLAeaI~~LLsd~~~p~ 496 (911)
+..+|+.||++|+||..| |||++++|||+||+|||+++.++.+|++.++.+|++++++|+++++++|.++++| ++
T Consensus 319 ~~~~~~~adv~v~ps~~e--~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~---~~ 393 (438)
T 3c48_A 319 LVAVYRAADIVAVPSFNE--SFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD---DE 393 (438)
T ss_dssp HHHHHHHCSEEEECCSCC--SSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC---HH
T ss_pred HHHHHHHCCEEEECCCCC--CCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCC---HH
T ss_conf 999998589999874026--8755999998769988962798725775079727987999999999999999759---89
Q ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999813999999999999999753999
Q 002535 497 FARNIASIGRRSVKNLMALETIEGYAMLLENVLKLPS 533 (911)
Q Consensus 497 ~~~klg~~ar~~ve~Fs~e~ia~~y~~Lle~iL~~p~ 533 (911)
.+.+|++++++.+++|+|+.++++|.++|+++++.+.
T Consensus 394 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 394 TRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999998857999999999999999863136
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=305.53 Aligned_cols=365 Identities=14% Similarity=0.147 Sum_probs=274.2
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCEEEEEC-----------
Q ss_conf 565568899997799992899999399999999999998899699999199842244540591189804-----------
Q 002535 134 HRKLHRFGYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQ----------- 202 (911)
Q Consensus 134 ~~~~~r~~~rk~rIalI~~~L~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~~~~~~gi~v~~l~----------- 202 (911)
|.+.+.+--+++++...... ..||.+.++..+++.|.+.||+|.+++........ ....++.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~p-~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 82 (394)
T 2jjm_A 5 GSSHHHHHHMKLKIGITCYP-SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-KVYPNIYFHEVTVNQYSVFQYPP 82 (394)
T ss_dssp ----------CCEEEEECCC---CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CCCTTEEEECCCCC----CCSCC
T ss_pred CCCCCCHHHHEEEEEHHCCC-CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCEEEEECCCCCCCCCCCCC
T ss_conf 56642000001455510078-98987899999999999689879999688877620-03786289852566654001565
Q ss_pred ----CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCC-CCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf ----533689864203964999958632689999862789-999899999181136779988730102667558999862
Q 002535 203 ----TGREKASFVNWLNYDGILVNSLEAKVVISNIMQEPF-KSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNR 277 (911)
Q Consensus 203 ----~~~~l~~lI~~~kpDIIhvhs~~~~~~ia~Ll~~~~-~giPvI~tiH~~~L~~~l~k~~~~~~d~iIs~~~~~~~~ 277 (911)
....+...++..+||+||+|+.........+..... .++|+|++.|+..... ...........+..++.
T Consensus 83 ~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~ 156 (394)
T 2jjm_A 83 YDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------LGSDPSLNNLIRFGIEQ 156 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT------TTTCTTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC------CCCCHHHHHHHHHHHHH
T ss_conf 207999999999977699999972433777889998886267877799971575212------58887788999999861
Q ss_pred CCEEEECCCCCCCCC--CCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHH
Q ss_conf 346870588621101--357999889918999896544546840038999860999999699999700332234332999
Q 002535 278 ATVVVFPDYVLPMMY--SAFDAGNYYVIPGSPAKAWEADTNMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHAL 355 (911)
Q Consensus 278 a~~vvfpn~~l~ii~--~~id~~ki~VIpg~gVD~~~f~~~~~~~k~~lR~~lgl~~d~~vIL~VGsrl~~~KGiKg~dl 355 (911)
++.+++.+....... ......++.+||+ |+|...+.+ ..+...+++++++++.++++++| ++.+. ||++.
T Consensus 157 ad~ii~~s~~~~~~~~~~~~~~~~~~vi~n-gv~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---Kg~~~ 228 (394)
T 2jjm_A 157 SDVVTAVSHSLINETHELVKPNKDIQTVYN-FIDERVYFK---RDMTQLKKEYGISESEKILIHIS-NFRKV---KRVQD 228 (394)
T ss_dssp SSEEEESCHHHHHHHHHHTCCSSCEEECCC-CCCTTTCCC---CCCHHHHHHTTCC---CEEEEEC-CCCGG---GTHHH
T ss_pred CCEEEECCHHHHHHHHHHHCCCCCEEEECC-CCCHHHCCC---CCHHHHHHHCCCCCCCEEEEEEE-CCCCC---CCHHH
T ss_conf 998999799999999985287656799558-756876088---63488998719998880899950-46653---58899
Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCEEEECCCCC
Q ss_conf 9999998044104477899987999992-999984289999999984999952999256000999997747568825677
Q 002535 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLE 434 (911)
Q Consensus 356 LIeAl~~L~~~~p~~~~~~~~vkLvIVG-G~~~e~Y~~~Le~la~~lgL~~~~V~flG~v~dV~~lL~~ADVfIlPS~~E 434 (911)
+++|+..+.++ ++ ++|+|+| |+.. +.++++++++++.+ +|.|+|+.+++..+|+.||++++||..|
T Consensus 229 li~a~~~l~~~-~~-------~~l~i~G~g~~~----~~l~~~~~~~~l~~-~v~~~g~~~~~~~~~~~adv~v~ps~~e 295 (394)
T 2jjm_A 229 VVQAFAKIVTE-VD-------AKLLLVGDGPEF----CTILQLVKNLHIED-RVLFLGKQDNVAELLAMSDLMLLLSEKE 295 (394)
T ss_dssp HHHHHHHHHHS-SC-------CEEEEECCCTTH----HHHHHHHHTTTCGG-GBCCCBSCSCTHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHH-CC-------CEEEEECCCHHH----HHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHCCEEEECCCCC
T ss_conf 99999999853-79-------789998896579----99999999739987-5999276665999998678999656667
Q ss_pred CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHCC
Q ss_conf 688559999999909979964887631121358508998399999999999999985999089999999999999-8139
Q 002535 435 EQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLM 513 (911)
Q Consensus 435 ~qGFplvLLEAMA~GlPVIaTd~gGi~EiV~dg~nGlLV~~~D~eaLAeaI~~LLsd~~~p~~~~klg~~ar~~v-e~Fs 513 (911)
|||++++|||+||+|||+++.++++|++.++.+|++++++|+++++++|.++++| ++.+.+|++++++.+ ++|+
T Consensus 296 --~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~---~~~~~~~~~~~~~~~~~~~s 370 (394)
T 2jjm_A 296 --SFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD---EELHRNMGERARESVYEQFR 370 (394)
T ss_dssp --SCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHSC
T ss_pred --CCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHCC
T ss_conf --8726899999649988981589807776348853996899999999999999749---79999999999999987379
Q ss_pred HHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999975399
Q 002535 514 ALETIEGYAMLLENVLKLP 532 (911)
Q Consensus 514 ~e~ia~~y~~Lle~iL~~p 532 (911)
|+.++++|.++|+++++..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 371 SEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999666
No 6
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=1.00 E-value=1 Score=302.28 Aligned_cols=354 Identities=15% Similarity=0.216 Sum_probs=266.0
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHH-HHH-----HCCCEEEEECC---------CH
Q ss_conf 9999779999289999939999999999999889969999919984224-454-----05911898045---------33
Q 002535 141 GYRKPQLALVFPDLLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHE-VWR-----NIGVPVAILQT---------GR 205 (911)
Q Consensus 141 ~~rk~rIalI~~~L~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~-~~~-----~~gi~v~~l~~---------~~ 205 (911)
+.+++||+++.+.+..||++.++..+++.|.+.||+|.+++........ ... ..+.....+.. ..
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNR 116 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHH
T ss_pred HHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 21260899991788888799999999999996797589997269853101314554453246554566888998999999
Q ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECC
Q ss_conf 68986420396499995863268999986278999989999918113677998873010266755899986234687058
Q 002535 206 EKASFVNWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFNRATVVVFPD 285 (911)
Q Consensus 206 ~l~~lI~~~kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI~tiH~~~L~~~l~k~~~~~~d~iIs~~~~~~~~a~~vvfpn 285 (911)
.+...++..+||+||+|++... .+..++. ..+|+|++.|+...... . .........+..++.+++..
T Consensus 117 ~~~~~l~~~~~Dvv~~~~~~~~-~~~~~~~---~~~p~v~~~h~~~~~~~-~--------~~~~~~~~~~~~~~~~i~~~ 183 (416)
T 2x6q_A 117 ENSKFIDLSSFDYVLVHDPQPA-ALIEFYE---KKSPWLWRCHIDLSSPN-R--------EFWEFLRRFVEKYDRYIFHL 183 (416)
T ss_dssp HHHHSSCGGGSSEEEEESSTTG-GGGGGSC---CCSCEEEECCSCCSSCC-H--------HHHHHHHHHHTTSSEEEESS
T ss_pred HHHHHHHHCCCCEEEEECCCHH-HHHHHHH---HCCCEEEEECCCCCCCC-H--------HHHHHHHHHHHHCCEEEEEC
T ss_conf 9999876439988999255355-6999998---35989999826667842-7--------79999999998579799965
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCC--CCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 862110135799988991899989654454--684003899986099999969999970033223433299999999980
Q 002535 286 YVLPMMYSAFDAGNYYVIPGSPAKAWEADT--NMDLYNDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPL 363 (911)
Q Consensus 286 ~~l~ii~~~id~~ki~VIpg~gVD~~~f~~--~~~~~k~~lR~~lgl~~d~~vIL~VGsrl~~~KGiKg~dlLIeAl~~L 363 (911)
+... ...+...++.+||+ |+|...+.. ..+..+..++++++++++.++++++| ++.+. ||++.+++|+..+
T Consensus 184 s~~~--~~~~~~~~~~vi~n-gvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~~l 256 (416)
T 2x6q_A 184 PEYV--QPELDRNKAVIMPP-SIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVS-RFDPW---KGIFDVIEIYRKV 256 (416)
T ss_dssp GGGS--CTTSCTTTEEECCC-CBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEEC-CCCTT---SCHHHHHHHHHHH
T ss_pred HHHH--HHHCCCCCEEEECC-CCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-CCCCC---CCHHHHHHHHHHH
T ss_conf 6999--72278465289479-9785664244467566899999838998984899996-24434---6979999999999
Q ss_pred HHHCCCCCCCCCCEEEEEEE-CCCC-CCHHHHHHHHHHHCCCCCCCEEECCCCC-----CHHHHHHHCCEEEECCCCCCC
Q ss_conf 44104477899987999992-9999-8428999999998499995299925600-----099999774756882567768
Q 002535 364 FSEVSVENESNSPIKVMILS-GDST-SNYSVVIEAIAHNLHYPLGVVKHMAAEG-----DVDSVLNTADVVIYGSFLEEQ 436 (911)
Q Consensus 364 ~~~~p~~~~~~~~vkLvIVG-G~~~-e~Y~~~Le~la~~lgL~~~~V~flG~v~-----dV~~lL~~ADVfIlPS~~E~q 436 (911)
.++.|+ ++|+|+| |+.. +.+...++++++++++.+ +|.|+|+.. ++..+|+.||++|+||..|
T Consensus 257 ~~~~~~-------~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~-~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E-- 326 (416)
T 2x6q_A 257 KEKIPG-------VQLLLVGVMAHDDPEGWIYFEKTLRKIGEDY-DVKVLTNLIGVHAREVNAFQRASDVILQMSIRE-- 326 (416)
T ss_dssp HHHCTT-------CEEEEEECCCTTCHHHHHHHHHHHHHHTTCT-TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSC--
T ss_pred HHHCCC-------EEEEEEECCCCCCHHHHHHHHHHHHHHCCCC-CEEEECCCCCCCHHHHHHHHHHCCEEEECCCCC--
T ss_conf 974888-------1899996676565567999999999808988-679944668887778999998689999877868--
Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHCCHH
Q ss_conf 8559999999909979964887631121358508998399999999999999985999089999999999999-813999
Q 002535 437 TFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVITNGKISPFARNIASIGRRSV-KNLMAL 515 (911)
Q Consensus 437 GFplvLLEAMA~GlPVIaTd~gGi~EiV~dg~nGlLV~~~D~eaLAeaI~~LLsd~~~p~~~~klg~~ar~~v-e~Fs~e 515 (911)
|||++++|||+||+|||+++.+|++|++.++.+|++++ |+++++++|.++++| ++.+.+|++++++.+ ++|+|+
T Consensus 327 ~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 327 GFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH---PEVSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp SSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHTBHH
T ss_pred CCCCHHHHHHHCCCCEEECCCCCCHHHEECCCCEEEEC--CHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHCCHH
T ss_conf 87608999998499899725998751201288869979--999999999999859---9999999999999998872899
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999975
Q 002535 516 ETIEGYAMLLENVL 529 (911)
Q Consensus 516 ~ia~~y~~Lle~iL 529 (911)
.++++|.++|++++
T Consensus 402 ~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 402 KHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999960
No 7
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=300.37 Aligned_cols=367 Identities=7% Similarity=0.001 Sum_probs=260.5
Q ss_pred CCCEEEEEECCC-----------CCCHHHHHHHH--------HHHHHHHCCCEEE----EEEECCCCC-----HHHHH--
Q ss_conf 997799992899-----------99939999999--------9999998899699----999199842-----24454--
Q 002535 143 RKPQLALVFPDL-----------LIDPQQLQMVT--------IAIALREIGYAIQ----VYSLEDGRA-----HEVWR-- 192 (911)
Q Consensus 143 rk~rIalI~~~L-----------~~GGae~~v~~--------Lak~L~~~GyeV~----Vis~~~g~~-----~~~~~-- 192 (911)
|..+|+++.++. ..||+..++.. +++.|.++||+|+ |+|...... ....+
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i 356 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERV 356 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEEC
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEE
T ss_conf 52489998477665754457888889836509989989999999999977996200168996898787777657751155
Q ss_pred --HCCCEEEEECCCHH----------------H--------HHHHHH--CCCCEEEECCCCHHHHHHHHHHCCCCCCCEE
Q ss_conf --05911898045336----------------8--------986420--3964999958632689999862789999899
Q 002535 193 --NIGVPVAILQTGRE----------------K--------ASFVNW--LNYDGILVNSLEAKVVISNIMQEPFKSLPLV 244 (911)
Q Consensus 193 --~~gi~v~~l~~~~~----------------l--------~~lI~~--~kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI 244 (911)
..++.+..++.... + ..++.. .+||+||+|.... +.++.++.+ ..++|+|
T Consensus 357 ~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~s-glva~llar-~~gvP~V 434 (816)
T 3s28_A 357 YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDG-NLVASLLAH-KLGVTQC 434 (816)
T ss_dssp TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHH-HHHHHHHHH-HHTCCEE
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH-HHHHHHHHH-HCCCCEE
T ss_conf 48697599996687766543345657788999999999999999996589973999688538-999999999-7599889
Q ss_pred EEECCCHHHH-H-----HHHHHHHC-CHHHHHHHHHHHHHCCEEEECCCCCCC-------CCCC----------------
Q ss_conf 9991811367-7-----99887301-026675589998623468705886211-------0135----------------
Q 002535 245 WTIHEGTLAT-R-----ARNYASSG-QLELLNDWKKVFNRATVVVFPDYVLPM-------MYSA---------------- 294 (911)
Q Consensus 245 ~tiH~~~L~~-~-----l~k~~~~~-~d~iIs~~~~~~~~a~~vvfpn~~l~i-------i~~~---------------- 294 (911)
+|.|+..... . ........ ...-+......++.++.++..+..... .+..
T Consensus 435 ~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI 514 (816)
T 3s28_A 435 TIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514 (816)
T ss_dssp EECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESC
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
T ss_conf 99816630012223301556778888988888999999849999988899999999888776442013541122101224
Q ss_pred -CCCCCEEEECCCCCCCCCCCCCCCHHH----------------HHHHHHHCC--CCCCEEEEEEEECCCCCCCCCCHHH
Q ss_conf -799988991899989654454684003----------------899986099--9999699999700332234332999
Q 002535 295 -FDAGNYYVIPGSPAKAWEADTNMDLYN----------------DTVRVKMGF--KPDDLVIAIVGTQFMYRGLWLEHAL 355 (911)
Q Consensus 295 -id~~ki~VIpg~gVD~~~f~~~~~~~k----------------~~lR~~lgl--~~d~~vIL~VGsrl~~~KGiKg~dl 355 (911)
....++.+||+ |+|...|.+...... ...++.+++ +++.++|+++| ++.+. ||++.
T Consensus 515 ~~~~~ki~VIpn-GVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vG-Rl~~~---KGid~ 589 (816)
T 3s28_A 515 DVFDPKFNIVSP-GADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMA-RLDRV---KNLSG 589 (816)
T ss_dssp CTTCTTEEECCC-CCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEEC-CCCTT---TTHHH
T ss_pred CCCCCCEEEECC-CCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEC-CCCCC---CCHHH
T ss_conf 467788799889-74788728631035543200232000124605677774445789983999974-47221---79999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEEE-CCCC-------CCHHHHHHHHHHHCCCCCCCEEECCCC------CCHHHHH
Q ss_conf 9999998044104477899987999992-9999-------842899999999849999529992560------0099999
Q 002535 356 ILRALLPLFSEVSVENESNSPIKVMILS-GDST-------SNYSVVIEAIAHNLHYPLGVVKHMAAE------GDVDSVL 421 (911)
Q Consensus 356 LIeAl~~L~~~~p~~~~~~~~vkLvIVG-G~~~-------e~Y~~~Le~la~~lgL~~~~V~flG~v------~dV~~lL 421 (911)
+++|+..+.+..++ ++|+|+| |+.. ..+...++++++++++.+ +|.|+|++ +++..+|
T Consensus 590 LIeA~~~L~~~~~~-------v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~-~V~flG~~~~~v~~~eL~~~~ 661 (816)
T 3s28_A 590 LVEWYGKNTRLREL-------ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG-QFRWISSQMDRVRNGELYRYI 661 (816)
T ss_dssp HHHHHHHCHHHHHH-------CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB-BEEEECCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC-------EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-CEEECCCCCCCCCHHHHHHHH
T ss_conf 99999997855799-------6999996887533343356999999999999749987-289816755668999999999
Q ss_pred H-HCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH----HCCCCCH
Q ss_conf 7-7475688256776885599999999099799648876311213585089983999999999999999----8599908
Q 002535 422 N-TADVVIYGSFLEEQTFPEILVKALCFRKPIIAPDLSNIRKYVDDRVNGYLFPKENIKALTHIILQVI----TNGKISP 496 (911)
Q Consensus 422 ~-~ADVfIlPS~~E~qGFplvLLEAMA~GlPVIaTd~gGi~EiV~dg~nGlLV~~~D~eaLAeaI~~LL----sd~~~p~ 496 (911)
. ++|++|+||..| |||++++||||||+|||+|+.||++|++.++.+|++++++|+++++++|.+++ +| ++
T Consensus 662 ~~aaDvfV~PS~~E--gfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d---~~ 736 (816)
T 3s28_A 662 CDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED---PS 736 (816)
T ss_dssp HHTTCEEEECCSCB--SSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC---TH
T ss_pred HHCCEEEEECCCCC--CCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCC---HH
T ss_conf 95690999888755--76499999998099999968987699970698189968999999999999999875269---99
Q ss_pred HHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999-81399999999999999975
Q 002535 497 FARNIASIGRRSV-KNLMALETIEGYAMLLENVL 529 (911)
Q Consensus 497 ~~~klg~~ar~~v-e~Fs~e~ia~~y~~Lle~iL 529 (911)
.+.+|+++|++.+ ++|+|+.++++|.++|+...
T Consensus 737 ~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 737 HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999999986899999999999999976
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=299.12 Aligned_cols=363 Identities=14% Similarity=0.085 Sum_probs=263.9
Q ss_pred CEEEEEECCC----CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH----------------------HHCCCEE
Q ss_conf 7799992899----9993999999999999988996999991998422445----------------------4059118
Q 002535 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW----------------------RNIGVPV 198 (911)
Q Consensus 145 ~rIalI~~~L----~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~~~----------------------~~~gi~v 198 (911)
+||+++.+.+ ..||.+.++..+++.|.+.||+|.|++...+...... ...++++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v 80 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEECCCEE
T ss_conf 96999944651565665499999999999997698699991564433444356513689998308747899999669569
Q ss_pred EEECCC-----------------------------HHHHHHH----HHCCCCEEEECCCCHHHHHHHHHHC-CCCCCCEE
Q ss_conf 980453-----------------------------3689864----2039649999586326899998627-89999899
Q 002535 199 AILQTG-----------------------------REKASFV----NWLNYDGILVNSLEAKVVISNIMQE-PFKSLPLV 244 (911)
Q Consensus 199 ~~l~~~-----------------------------~~l~~lI----~~~kpDIIhvhs~~~~~~ia~Ll~~-~~~giPvI 244 (911)
..++.. ..+..++ +..+||+||+|++... .++.++.. ...++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~-~~~~~~~~~~~~~~p~v 159 (485)
T 1rzu_A 81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAA-MTPVYMRYAETPEIPSL 159 (485)
T ss_dssp EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHT-THHHHHHHSSSCCCCEE
T ss_pred EEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHH-HHHHHHHHCCCCCCCEE
T ss_conf 99848677277766558865666530679999999999999998615799988996463055-78999731035899789
Q ss_pred EEECCCHHHH-----HHHH------HHHH-C--CHHHHHHHHHHHHHCCEEEECCCCCCCCCC----C--------CCCC
Q ss_conf 9991811367-----7998------8730-1--026675589998623468705886211013----5--------7999
Q 002535 245 WTIHEGTLAT-----RARN------YASS-G--QLELLNDWKKVFNRATVVVFPDYVLPMMYS----A--------FDAG 298 (911)
Q Consensus 245 ~tiH~~~L~~-----~l~k------~~~~-~--~d~iIs~~~~~~~~a~~vvfpn~~l~ii~~----~--------id~~ 298 (911)
+++|+..... .+.. .... . ........+..+..++.++..+........ + ....
T Consensus 160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (485)
T 1rzu_A 160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAH 239 (485)
T ss_dssp EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGG
T ss_pred EEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCC
T ss_conf 99667544687887787343998032020001325623599988864677996087589998354357665899986068
Q ss_pred CEEEECCCCCCCCCCCCCCCH----------------HHHHHHHHHCCCCC-CEEEEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 889918999896544546840----------------03899986099999-9699999700332234332999999999
Q 002535 299 NYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKPD-DLVIAIVGTQFMYRGLWLEHALILRALL 361 (911)
Q Consensus 299 ki~VIpg~gVD~~~f~~~~~~----------------~k~~lR~~lgl~~d-~~vIL~VGsrl~~~KGiKg~dlLIeAl~ 361 (911)
++.+||+ |+|...|.+.... .+..++++++++++ .++++++| ++.+. ||++.+++|+.
T Consensus 240 ~~~vi~n-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vG-rl~~~---Kg~~~li~a~~ 314 (485)
T 1rzu_A 240 VLHGIVN-GIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVIS-RLTWQ---KGIDLMAEAVD 314 (485)
T ss_dssp GEEECCC-CBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEES-CBSTT---TTHHHHHTTHH
T ss_pred CCEEECC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEC-CCCCC---CCHHHHHHHHH
T ss_conf 8169708-9860205886651100012432445678869999996298889983999972-57531---28799999999
Q ss_pred HHHHHCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCCEE-ECCCCCC-HHHHHHHCCEEEECCCCCCCCC
Q ss_conf 8044104477899987999992-99998428999999998499995299-9256000-9999977475688256776885
Q 002535 362 PLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEGD-VDSVLNTADVVIYGSFLEEQTF 438 (911)
Q Consensus 362 ~L~~~~p~~~~~~~~vkLvIVG-G~~~e~Y~~~Le~la~~lgL~~~~V~-flG~v~d-V~~lL~~ADVfIlPS~~E~qGF 438 (911)
.+.+. + ++|+|+| |+. .+.+.+++++++++ + +|. +.|+..+ +..+|+.||++|+||..| ||
T Consensus 315 ~l~~~--~-------~~l~ivG~g~~--~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~~ 378 (485)
T 1rzu_A 315 EIVSL--G-------GRLVVLGAGDV--ALEGALLAAASRHH--G-RVGVAIGYNEPLSHLMQAGCDAIIIPSRFE--PC 378 (485)
T ss_dssp HHHHT--T-------CEEEEEECBCH--HHHHHHHHHHHHTT--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--SS
T ss_pred HHHHC--C-------CEEEEEECCCH--HHHHHHHHHHHHCC--C-CEEEECCCCHHHHHHHHHCCCEEEECCCCC--CC
T ss_conf 98726--9-------56999968946--89999999998678--8-689943899799999985299999784468--87
Q ss_pred CHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CCEEEECCCCHHHHHHHHHHHH---HCCCCCHHHHHHHHHHH
Q ss_conf 59999999909979964887631121358---------5089983999999999999999---85999089999999999
Q 002535 439 PEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQVI---TNGKISPFARNIASIGR 506 (911)
Q Consensus 439 plvLLEAMA~GlPVIaTd~gGi~EiV~dg---------~nGlLV~~~D~eaLAeaI~~LL---sd~~~p~~~~klg~~ar 506 (911)
|++++|||+||+|||+++.+|++|++.++ .+|++++++|+++++++|.+++ +| ++.+.+|+.+++
T Consensus 379 ~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~~ 455 (485)
T 1rzu_A 379 GLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD---PKLWTQMQKLGM 455 (485)
T ss_dssp CSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC---HHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHH
T ss_conf 77999999779977980899831132156533234567763486789999999999999987279---999999999999
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9998139999999999999997539997
Q 002535 507 RSVKNLMALETIEGYAMLLENVLKLPSE 534 (911)
Q Consensus 507 ~~ve~Fs~e~ia~~y~~Lle~iL~~p~~ 534 (911)
+ ++|+|+.++++|.++|+++++.+..
T Consensus 456 ~--~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 456 K--SDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp T--CCCBHHHHHHHHHHHHHHHTC----
T ss_pred H--HHCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 8--8689699999999999986379988
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=298.49 Aligned_cols=361 Identities=14% Similarity=0.079 Sum_probs=262.2
Q ss_pred CEEEEEECCC----CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH---------------------HHCCCEEE
Q ss_conf 7799992899----9993999999999999988996999991998422445---------------------40591189
Q 002535 145 PQLALVFPDL----LIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVW---------------------RNIGVPVA 199 (911)
Q Consensus 145 ~rIalI~~~L----~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~~~---------------------~~~gi~v~ 199 (911)
+||+++.+.+ ..||++.++.++++.|.+.||+|.|++...+...... ...++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 80 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY 80 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEE
T ss_conf 96999964104665677399999999999997498789994476434543456405787415687179999987894799
Q ss_pred EECC----------C-------------------HHHHHHHHH----CCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 8045----------3-------------------368986420----396499995863268999986278999989999
Q 002535 200 ILQT----------G-------------------REKASFVNW----LNYDGILVNSLEAKVVISNIMQEPFKSLPLVWT 246 (911)
Q Consensus 200 ~l~~----------~-------------------~~l~~lI~~----~kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI~t 246 (911)
.++. . ..+..+++. .+||+||+|++... .++.++.....++|+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~-~~~~~~~~~~~~~p~v~t 159 (485)
T 2qzs_A 81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG-LAPAYLAARGRPAKSVFT 159 (485)
T ss_dssp EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGT-THHHHHHHTTCSSEEEEE
T ss_pred EEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH-HHHHHHHHCCCCCCEEEE
T ss_conf 9708265068987667754577873589999999999999998456789978996062133-789997543689978999
Q ss_pred ECCCHHHH-----HHHHH--HHH-C------CHHHHHHHHHHHHHCCEEEECCCCCCCCC----CCC--------CC--C
Q ss_conf 91811367-----79988--730-1------02667558999862346870588621101----357--------99--9
Q 002535 247 IHEGTLAT-----RARNY--ASS-G------QLELLNDWKKVFNRATVVVFPDYVLPMMY----SAF--------DA--G 298 (911)
Q Consensus 247 iH~~~L~~-----~l~k~--~~~-~------~d~iIs~~~~~~~~a~~vvfpn~~l~ii~----~~i--------d~--~ 298 (911)
+|+..... .+... ... . ........+..+..++.++..+....... .+. .. .
T Consensus 160 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T 2qzs_A 160 VHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG 239 (485)
T ss_dssp ESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTT
T ss_pred ECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCC
T ss_conf 46841357889888876499913213111232465469999987538688568899999854014724689998506678
Q ss_pred CEEEECCCCCCCCCCCCCCCH----------------HHHHHHHHHCCCC--CCEEEEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 889918999896544546840----------------0389998609999--9969999970033223433299999999
Q 002535 299 NYYVIPGSPAKAWEADTNMDL----------------YNDTVRVKMGFKP--DDLVIAIVGTQFMYRGLWLEHALILRAL 360 (911)
Q Consensus 299 ki~VIpg~gVD~~~f~~~~~~----------------~k~~lR~~lgl~~--d~~vIL~VGsrl~~~KGiKg~dlLIeAl 360 (911)
++.+||+ |+|...|.+.... .+..+++++++++ +.++++++|+ +.+. ||++.+++|+
T Consensus 240 ~~~vi~n-gvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGr-l~~~---Kg~~~li~a~ 314 (485)
T 2qzs_A 240 RLSGVLN-GVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSR-LTSQ---KGLDLVLEAL 314 (485)
T ss_dssp CEEECCC-CCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEE-ESGG---GCHHHHHHHH
T ss_pred CEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC-CCCC---CCHHHHHHHH
T ss_conf 6699746-987664586444222123663006577884999998719888999739999666-7543---5879999999
Q ss_pred HHHHHHCCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCCEE-ECCCCC-CHHHHHHHCCEEEECCCCCCCC
Q ss_conf 98044104477899987999992-99998428999999998499995299-925600-0999997747568825677688
Q 002535 361 LPLFSEVSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVK-HMAAEG-DVDSVLNTADVVIYGSFLEEQT 437 (911)
Q Consensus 361 ~~L~~~~p~~~~~~~~vkLvIVG-G~~~e~Y~~~Le~la~~lgL~~~~V~-flG~v~-dV~~lL~~ADVfIlPS~~E~qG 437 (911)
..+.+. + ++|+|+| |+. .+.+.+++++++++ + +|. +.|+.. ++..+|+.||++|+||..| |
T Consensus 315 ~~l~~~--~-------~~l~ivG~g~~--~~~~~l~~~~~~~~--~-~v~~~~g~~~~~~~~~~~~adv~v~pS~~E--~ 378 (485)
T 2qzs_A 315 PGLLEQ--G-------GQLALLGAGDP--VLQEGFLAAAAEYP--G-QVGVQIGYHEAFSHRIMGGADVILVPSRFE--P 378 (485)
T ss_dssp HHHHHT--T-------CEEEEEEEECH--HHHHHHHHHHHHST--T-TEEEEESCCHHHHHHHHHHCSEEEECCSCC--S
T ss_pred HHHHHC--C-------CEEEEEECCCH--HHHHHHHHHHHHCC--C-CEEEECCCCHHHHHHHHHHCCEEEECCCCC--C
T ss_conf 998627--9-------48999928956--78999999997579--9-389947899799999997588999788567--8
Q ss_pred CCHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CCEEEECCCCHHHHHHHHHHHH---HCCCCCHHHHHHHHHH
Q ss_conf 559999999909979964887631121358---------5089983999999999999999---8599908999999999
Q 002535 438 FPEILVKALCFRKPIIAPDLSNIRKYVDDR---------VNGYLFPKENIKALTHIILQVI---TNGKISPFARNIASIG 505 (911)
Q Consensus 438 FplvLLEAMA~GlPVIaTd~gGi~EiV~dg---------~nGlLV~~~D~eaLAeaI~~LL---sd~~~p~~~~klg~~a 505 (911)
||++++|||+||+|||+++.+|++|++.++ .+|++++++|+++++++|.+++ +| ++.+.+|+.++
T Consensus 379 ~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~---~~~~~~~~~~~ 455 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR---PSLWRFVQRQA 455 (485)
T ss_dssp SCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS---HHHHHHHHHHH
T ss_pred CCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHH
T ss_conf 767999999779977987899832552157644344466645997789999999999999987089---99999999998
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 999981399999999999999975399
Q 002535 506 RRSVKNLMALETIEGYAMLLENVLKLP 532 (911)
Q Consensus 506 r~~ve~Fs~e~ia~~y~~Lle~iL~~p 532 (911)
++ ++|+|+.++++|.++|++++..+
T Consensus 456 ~~--~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 456 MA--MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HH--CCCCHHHHHHHHHHHHHHHC---
T ss_pred HH--HCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 76--32898999999999999865421
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=1.00 E-value=1 Score=292.67 Aligned_cols=351 Identities=14% Similarity=0.097 Sum_probs=260.5
Q ss_pred CEEEEEECC-CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCEEEEECCC------------HHHHHHH
Q ss_conf 779999289-999939999999999999889969999919984224454059118980453------------3689864
Q 002535 145 PQLALVFPD-LLIDPQQLQMVTIAIALREIGYAIQVYSLEDGRAHEVWRNIGVPVAILQTG------------REKASFV 211 (911)
Q Consensus 145 ~rIalI~~~-L~~GGae~~v~~Lak~L~~~GyeV~Vis~~~g~~~~~~~~~gi~v~~l~~~------------~~l~~lI 211 (911)
+||+++.+. ...||.+.++..+++.|.+.||+|.+++....... ..++.+..++.. ..+...+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i 76 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC----PKAFELIQVPVKSHTNHGRNAEYYAWVQNHL 76 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC----CTTCEEEECCCCCSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 969999721588761635999999999967984899964898878----8774799971686443016778999999998
Q ss_pred HHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHH--HCCEEEECCCCCC
Q ss_conf 20396499995863268999986278999989999918113677998873010266755899986--2346870588621
Q 002535 212 NWLNYDGILVNSLEAKVVISNIMQEPFKSLPLVWTIHEGTLATRARNYASSGQLELLNDWKKVFN--RATVVVFPDYVLP 289 (911)
Q Consensus 212 ~~~kpDIIhvhs~~~~~~ia~Ll~~~~~giPvI~tiH~~~L~~~l~k~~~~~~d~iIs~~~~~~~--~a~~vvfpn~~l~ 289 (911)
+..+||+||+|+.... ....+. .....++.+++.|+.... ....+ ..........+. .++.+++.+....
T Consensus 77 ~~~~~Dvv~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~d~ii~~s~~~~ 148 (374)
T 2iw1_A 77 KEHPADRVVGFNKMPG-LDVYFA-ADVCYAEKVAQEKGFLYR-LTSRY-----RHYAAFERATFEQGKSTKLMMLTDKQI 148 (374)
T ss_dssp HHSCCSEEEESSCCTT-CSEEEC-CSCCHHHHHHHHCCHHHH-TSHHH-----HHHHHHHHHHHSTTCCCEEEESCHHHH
T ss_pred HCCCCCEEEEECCCCC-CEEEEC-CCCCCCEEEEECCCCHHH-HCHHH-----HHHHHHHHHHHHCCCCCEEEECCHHHH
T ss_conf 5069988999667788-521300-156542133303562121-04778-----999999999864267757998698999
Q ss_pred CC---CCCCCCCCEEEECCCCCCCCCCCCCCCHH-HHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 10---13579998899189998965445468400-389998609999996999997003322343329999999998044
Q 002535 290 MM---YSAFDAGNYYVIPGSPAKAWEADTNMDLY-NDTVRVKMGFKPDDLVIAIVGTQFMYRGLWLEHALILRALLPLFS 365 (911)
Q Consensus 290 ii---~~~id~~ki~VIpg~gVD~~~f~~~~~~~-k~~lR~~lgl~~d~~vIL~VGsrl~~~KGiKg~dlLIeAl~~L~~ 365 (911)
.. ..+++..++.+||+ |+|...+.+..... +..++++++++++.++++++| ++.+. ||++.+++|+..+.+
T Consensus 149 ~~~~~~~~~~~~~~~vi~n-gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G-~~~~~---K~~~~li~a~~~l~~ 223 (374)
T 2iw1_A 149 ADFQKHYQTEPERFQILPP-GIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVG-SDFGR---KGVDRSIEALASLPE 223 (374)
T ss_dssp HHHHHHHCCCGGGEEECCC-CCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEEC-SCTTT---TTHHHHHHHHHTSCH
T ss_pred HHHHHHHCCCHHHEEEECC-CCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC-CCHHH---CCHHHHHHHHHHHHH
T ss_conf 9999971897110688569-858776176442357999999728997872999964-64101---388999999998676
Q ss_pred H-CCCCCCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCEEEECCCCCCCCCCHHHH
Q ss_conf 1-04477899987999992-999984289999999984999952999256000999997747568825677688559999
Q 002535 366 E-VSVENESNSPIKVMILS-GDSTSNYSVVIEAIAHNLHYPLGVVKHMAAEGDVDSVLNTADVVIYGSFLEEQTFPEILV 443 (911)
Q Consensus 366 ~-~p~~~~~~~~vkLvIVG-G~~~e~Y~~~Le~la~~lgL~~~~V~flG~v~dV~~lL~~ADVfIlPS~~E~qGFplvLL 443 (911)
+ .++ ++|+++| |+ . +.++++++++++.+ +|+++|+.+++.++|+.||++|+||..| |||++++
T Consensus 224 ~~~~~-------~~l~i~G~g~-~----~~~~~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~ps~~e--~~~~~~~ 288 (374)
T 2iw1_A 224 SLRHN-------TLLFVVGQDK-P----RKFEALAEKLGVRS-NVHFFSGRNDVSELMAAADLLLHPAYQE--AAGIVLL 288 (374)
T ss_dssp HHHHT-------EEEEEESSSC-C----HHHHHHHHHHTCGG-GEEEESCCSCHHHHHHHCSEEEECCSCC--SSCHHHH
T ss_pred CCCCC-------EEEEEECCCC-H----HHHHHHHHHCCCCC-CEEECCCCCCHHHHHHHCCEEEECCCCC--CCCCHHH
T ss_conf 04886-------6999970898-7----99999999739877-3797788403899998468898354247--7556999
Q ss_pred HHHHCCCCEEECCCCCCCCCCCCCCCEEEEC-CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 9999099799648876311213585089983-999999999999999859990899999999999998139999999999
Q 002535 444 KALCFRKPIIAPDLSNIRKYVDDRVNGYLFP-KENIKALTHIILQVITNGKISPFARNIASIGRRSVKNLMALETIEGYA 522 (911)
Q Consensus 444 EAMA~GlPVIaTd~gGi~EiV~dg~nGlLV~-~~D~eaLAeaI~~LLsd~~~p~~~~klg~~ar~~ve~Fs~e~ia~~y~ 522 (911)
|||+||+|||+++.+|..|++.++.+|++++ ++|+++++++|.++++| ++.+.+|++++++.+++++|...++.+.
T Consensus 289 Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T 2iw1_A 289 EAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ---SPLRMAWAENARHYADTQDLYSLPEKAA 365 (374)
T ss_dssp HHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHSCCSCHHHHHH
T ss_pred HHHHCCCCEEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9997799889826998044430698319967999989999999999719---4999999999999998753899999999
Q ss_pred HHHHHHHC
Q ss_conf 99999753
Q 002535 523 MLLENVLK 530 (911)
Q Consensus 523 ~Lle~iL~ 530 (911)
++++..+.
T Consensus 366 ~~l~~~l~ 373 (374)
T 2iw1_A 366 DIITGGLD 373 (374)
T ss_dssp HHHHCC--
T ss_pred HHHHHHHC
T ss_conf 99998636
Done!