BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002544
(910 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R9T9|GBP6_PONAB Guanylate-binding protein 6 OS=Pongo abelii GN=GBP6 PE=2 SV=1
Length = 633
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 134/242 (55%), Gaps = 7/242 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASG---GKTTPSELGQFSPIFVWLLRDFYL 58
FIYN M I+ A+++L VT++T+ I+ ++S G +E F P F+W +RDF L
Sbjct: 126 FIYNSMSTINHQALEQLHYVTELTELIKAKSSPRPDGVDDSTEFVSFFPDFIWTVRDFTL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
+L + IT +YLE AL+ +QG+ + N R+ IR FP R+CF RP ++++
Sbjct: 186 ELKLNGHPITEDEYLENALKLIQGNNPRVQTSNLPRECIRRFFPKRKCFIFDRPTNDKDL 245
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L ++++S +L P+F+ + + ++F R K + ++TG L + +Y++A+N+
Sbjct: 246 LANIEKVSEKQLDPKFQEQTNIFSSYIFTHARTKTLREGIIVTGNRLGTLAVTYVEAVNS 305
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETYMSTF-DRSKPPEEVA--LGEAHEAAVQKALA 234
GAVP + ++ ++ + E A A + Y R K P + L + H A ++A+A
Sbjct: 306 GAVPCLENAVITLAQRENSAAVQRAADYYSQQMAQRVKFPTDTLQELLDMHAACEREAIA 365
Query: 235 VY 236
++
Sbjct: 366 IF 367
>sp|Q61107|GBP4_MOUSE Guanylate-binding protein 4 OS=Mus musculus GN=Gbp4 PE=1 SV=1
Length = 620
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 131/242 (54%), Gaps = 7/242 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKTT---PSELGQFSPIFVWLLRDFYL 58
F+YN M I++ A+++L VT++T+ IR ++S + SE F P F+W +RDF L
Sbjct: 120 FVYNSMSTINQQALEQLHFVTELTQLIRAKSSPREDKVKDSSEFVGFFPDFIWAVRDFAL 179
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
+L + R IT +YLE AL+ +QG + N R+ IR FP R+CF RP S++
Sbjct: 180 ELKLNGRPITEDEYLENALKLIQGDNLKVQQSNMTRECIRYFFPVRKCFVFDRPTSDKRL 239
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +++ + ++L F+ + ++F + K + G ++TG L + ++Y++AIN+
Sbjct: 240 LLQIENVPENQLERNFQVESEKFCSYIFTNGKTKTLRGGVIVTGNRLGTLVQTYVNAINS 299
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETYMSTF-DRSKPPEEVA--LGEAHEAAVQKALA 234
G VP + ++ ++ + E A A + Y R + P + L H A ++A+A
Sbjct: 300 GTVPCLENAVTTLAQRENSIAVQKAADHYSEQMAQRMRLPTDTLQELLTVHAACEKEAIA 359
Query: 235 VY 236
V+
Sbjct: 360 VF 361
>sp|Q6ZN66|GBP6_HUMAN Guanylate-binding protein 6 OS=Homo sapiens GN=GBP6 PE=2 SV=1
Length = 633
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 134/243 (55%), Gaps = 9/243 (3%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASG---GKTTPSELGQFSPIFVWLLRDFYL 58
F+YN M I+ A+++L VT++T+ I+ ++S G +E F P F+W +RDF L
Sbjct: 126 FVYNSMSTINHQALEQLHYVTELTELIKAKSSPRPDGVEDSTEFVSFFPDFLWTVRDFTL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
+L + IT +YLE AL+ +QG+ + N R+ IR FP R+CF RP ++++
Sbjct: 186 ELKLNGHPITEDEYLENALKLIQGNNPRVQTSNFPRECIRRFFPKRKCFVFDRPTNDKDL 245
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV--GATVLTGPVLIGITESYLDAIN 176
L ++++S +L P+F+ + ++F R K + G TV TG L + +Y++AIN
Sbjct: 246 LANIEKVSEKQLDPKFQEQTNIFCSYIFTHARTKTLREGITV-TGNRLGTLAVTYVEAIN 304
Query: 177 NGAVPTISSSWQSVEEAECRRAYDSATETYMSTF-DRSKPPEEVA--LGEAHEAAVQKAL 233
+GAVP + ++ ++ + E A A + Y R K P + L + H A ++A+
Sbjct: 305 SGAVPCLENAVITLAQRENSAAVQRAADYYSQQMAQRVKLPTDTLQELLDMHAACEREAI 364
Query: 234 AVY 236
A++
Sbjct: 365 AIF 367
>sp|Q01514|GBP1_MOUSE Interferon-induced guanylate-binding protein 1 OS=Mus musculus
GN=Gbp1 PE=1 SV=1
Length = 589
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT---TPSELGQFSPIFVWLLRDFYL 58
FIYN +G I++ A+D+L VT++T I+ ++S ++ + F PIFVW LRDF L
Sbjct: 126 FIYNSIGTINQQAMDQLHYVTELTDLIKSKSSPDQSDVDNSANFVGFFPIFVWTLRDFSL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
DL D ITP +YLE +L +G+ + N R IR FP R+CF RP + +
Sbjct: 186 DLEFDGESITPDEYLETSLALRKGTDENTKKFNMPRLCIRKFFPKRKCFIFDRP-GDRKQ 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +L+ I D+L EF + T ++F + K + G + GP L + ++Y+ AI +
Sbjct: 245 LSKLEWIQEDQLNKEFVEQVAEFTSYIFSYSGVKTLSGGITVNGPRLKSLVQTYVSAICS 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G +P + ++ ++ + E A A Y
Sbjct: 305 GELPCMENAVLTLAQIENSAAVQKAITYY 333
>sp|Q8N8V2|GBP7_HUMAN Guanylate-binding protein 7 OS=Homo sapiens GN=GBP7 PE=2 SV=2
Length = 638
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKTTP--------SELGQFSPIFVWLL 53
F+YN MG I+ A+++L VT++T+ IR K+ P SE F P F+W +
Sbjct: 126 FVYNSMGTINHQALEQLHYVTELTELIR-----AKSCPRPDEVEDSSEFVSFFPDFIWTV 180
Query: 54 RDFYLDLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPL 113
RDF L+L D IT +YLE AL+ + G I N+ R+ IR FP ++CF RP+
Sbjct: 181 RDFTLELKLDGHPITEDEYLENALKLISGKNPQIQNSNKPREWIRHFFPKQKCFVFDRPI 240
Query: 114 SNENELQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQVGATVL-TGPVLIGITESYL 172
+++ L ++++ D+L F+ + ++F + K + +L TG L + E+YL
Sbjct: 241 NDKKLLLHVEEVREDQLDSNFQMQSENFCSYIFTHAKTKTLREGILVTGNRLGMLVETYL 300
Query: 173 DAINNGAVPTISSSWQSVEEAECRRAYDSATETY 206
DAIN+GA P + ++ + + E A A Y
Sbjct: 301 DAINSGATPCLENAMAVLAQCENSAAVQRAANHY 334
>sp|Q63663|GBP2_RAT Interferon-induced guanylate-binding protein 2 OS=Rattus norvegicus
GN=Gbp2 PE=1 SV=2
Length = 589
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRAS---GGKTTPSELGQFSPIFVWLLRDFYL 58
F+YN MG I++ A+D+L VT++T I+ ++S G + F P FVW LRDF L
Sbjct: 126 FVYNSMGTINQQAMDQLHYVTELTDLIKSKSSPDQSGIDDSANFVGFFPTFVWALRDFSL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
+L + + +TP +YLE +L +G+ + + NE R IR FP R+CF RP + +
Sbjct: 186 ELEVNGKLVTPDEYLEHSLTLKKGADKKTKSFNEPRLCIRKFFPKRKCFIFDRP-ALRKQ 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +L+ + + L EF + T ++F + K + G ++ GP L + ++Y+ AI++
Sbjct: 245 LCKLETLGEEELCSEFVEQVAEFTSYIFSYSAVKTLSGGIIVNGPRLKSLVQTYVGAISS 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G++P + S+ ++ + E A A Y
Sbjct: 305 GSLPCMESAVLTLAQIENSAAVQKAITHY 333
>sp|P32456|GBP2_HUMAN Interferon-induced guanylate-binding protein 2 OS=Homo sapiens
GN=GBP2 PE=1 SV=3
Length = 591
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKTT---PSELGQFSPIFVWLLRDFYL 58
F+YN MG I++ A+D+L VT++T I+ +S G + ++ F P FVW LRDF L
Sbjct: 126 FVYNSMGTINQQAMDQLHYVTELTDRIKANSSPGNNSVDDSADFVSFFPAFVWTLRDFTL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
+L D IT DYLE++L+ +G+ + + N+ R IR FP R+CF P + +
Sbjct: 186 ELEVDGEPITADDYLELSLKLRKGTDKKSKSFNDPRLCIRKFFPKRKCFVFDWP-APKKY 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L L+Q+ + L P+F + ++ + K + G + GP L + +Y++AI++
Sbjct: 245 LAHLEQLKEEELNPDFIEQVAEFCSYILSHSNVKTLSGGIPVNGPRLESLVLTYVNAISS 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G +P + ++ ++ + E A + A Y
Sbjct: 305 GDLPCMENAVLALAQIENSAAVEKAIAHY 333
>sp|Q9H0R5|GBP3_HUMAN Guanylate-binding protein 3 OS=Homo sapiens GN=GBP3 PE=2 SV=3
Length = 595
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT---TPSELGQFSPIFVWLLRDFYL 58
+YN MG I++ A+D+L VT++T IR ++S + ++ F P FVW LRDF L
Sbjct: 126 LVYNSMGTINQQAMDQLYYVTELTHRIRSKSSPDENENEDSADFVSFFPDFVWTLRDFSL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
DL D + +TP +YLE +L+ QG+ + N R IR FP ++CF P+ + +
Sbjct: 186 DLEADGQPLTPDEYLEYSLKLTQGTSQKDKNFNLPRLCIRKFFPKKKCFVFDLPI-HRRK 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +L+++ + L PEF + ++F ++ K + G + GP L + +Y++AI+
Sbjct: 245 LAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIKVNGPRLESLVLTYINAISR 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G +P + ++ ++ + E A A Y
Sbjct: 305 GDLPCMENAVLALAQIENSAAVQKAIAHY 333
>sp|Q96PP9|GBP4_HUMAN Guanylate-binding protein 4 OS=Homo sapiens GN=GBP4 PE=1 SV=2
Length = 640
Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKTTP--------SELGQFSPIFVWLL 53
F+YN + I+ A+++L VT++ + IR K+ P SE F P F+W +
Sbjct: 141 FVYNSVSTINHQALEQLHYVTELAELIR-----AKSCPRPDEAEDSSEFASFFPDFIWTV 195
Query: 54 RDFYLDLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPL 113
RDF L+L D IT +YLE AL+ + G I N R+ IR F R+CF RP
Sbjct: 196 RDFTLELKLDGNPITEDEYLENALKLIPGKNPKIQNSNMPRECIRHFFRKRKCFVFDRPT 255
Query: 114 SNENELQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYL 172
+++ L +D++ + L F D ++F + K + ++TG L + +Y+
Sbjct: 256 NDKQYLNHMDEVPEENLERHFLMQSDNFCSYIFTHAKTKTLREGIIVTGKRLGTLVVTYV 315
Query: 173 DAINNGAVPTISSSWQSVEEAECRRAYDSATETYMSTFDRS-KPPEEVA--LGEAHEAAV 229
DAIN+GAVP + ++ ++ + E A A + Y + + P + L + H A
Sbjct: 316 DAINSGAVPCLENAVTALAQLENPAAVQRAADHYSQQMAQQLRLPTDTLQELLDVHAACE 375
Query: 230 QKALAVY 236
++A+AV+
Sbjct: 376 REAIAVF 382
>sp|Q9Z0E6|GBP2_MOUSE Interferon-induced guanylate-binding protein 2 OS=Mus musculus
GN=Gbp2 PE=1 SV=1
Length = 589
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRAS---GGKTTPSELGQFSPIFVWLLRDFYL 58
FIYN +G I++ A+D+L VT++T I+ ++S G + F P FVW LRDF L
Sbjct: 126 FIYNSIGTINQQAMDQLHYVTELTDLIKSKSSPDQSGVDDSANFVGFFPTFVWTLRDFSL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
+L + + +T +YLE +L +G+ + + NE R IR FP R+CF RP + +
Sbjct: 186 ELEVNGKPVTSDEYLEHSLTLKKGADKKTKSFNEPRLCIRKFFPKRKCFIFDRP-AQRKQ 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +L+ + + L EF + T ++ + K + G ++ GP L + ++Y+ AI+N
Sbjct: 245 LSKLETLREEELCGEFVEQVAEFTSYILSYSSVKTLCGGIIVNGPRLKSLVQTYVGAISN 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G++P + S+ ++ + E A A Y
Sbjct: 305 GSLPCMESAVLTLAQIENSAAVQKAITHY 333
>sp|Q5D1D6|GBP1_CHLAE Interferon-induced guanylate-binding protein 1 OS=Chlorocebus
aethiops GN=GBP1 PE=2 SV=1
Length = 590
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT---TPSELGQFSPIFVWLLRDFYL 58
F+YN MG I++ A+D+L VT++T IR ++S + ++ F P FVW LRDF L
Sbjct: 126 FVYNSMGTINQQAMDQLHYVTELTHRIRSKSSPDENENEDSADFVSFFPDFVWTLRDFSL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
DL D + IT +YL +L+ +G+ N R IR FP ++CF RP+ + +
Sbjct: 186 DLEADGQPITADEYLTYSLKLKKGTSEKDKTFNLPRLCIRKFFPKKKCFVFDRPV-HRKK 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +L+++ + L PEF + ++F ++ K + G + GP L + +Y++AI++
Sbjct: 245 LAQLEKLHDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIKVNGPRLESLVLTYVNAISS 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G +P + ++ ++ + E A A Y
Sbjct: 305 GDLPCMENAVLALAQIENSAAVQKAVAHY 333
>sp|Q5RBE1|GBP1_PONAB Interferon-induced guanylate-binding protein 1 OS=Pongo abelii
GN=GBP1 PE=2 SV=1
Length = 592
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 7/211 (3%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT-----TPSELGQFSPIFVWLLRDF 56
F+YN +G I++ A+D+L VT++T IR ++S + ++ F P FVW LRDF
Sbjct: 126 FVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDF 185
Query: 57 YLDLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNE 116
LDL D + +TP +YL +L+ +G+ + N R IR FP ++CF RP+ +
Sbjct: 186 SLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPV-HR 244
Query: 117 NELQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAI 175
+L +L+++ + L PEF + ++F ++ K + G + GP L + +Y++AI
Sbjct: 245 RKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTYVNAI 304
Query: 176 NNGAVPTISSSWQSVEEAECRRAYDSATETY 206
++G +P + ++ ++ + E A A Y
Sbjct: 305 SSGDLPCMENAVLALAQIENSAAVQKAIAHY 335
>sp|P32455|GBP1_HUMAN Interferon-induced guanylate-binding protein 1 OS=Homo sapiens
GN=GBP1 PE=1 SV=2
Length = 592
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 7/211 (3%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT-----TPSELGQFSPIFVWLLRDF 56
F+YN +G I++ A+D+L VT++T IR ++S + ++ F P FVW LRDF
Sbjct: 126 FVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDF 185
Query: 57 YLDLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNE 116
LDL D + +TP +YL +L+ +G+ + N R IR FP ++CF RP+ +
Sbjct: 186 SLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPV-HR 244
Query: 117 NELQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAI 175
+L +L+++ + L PEF + ++F ++ K + G + GP L + +Y++AI
Sbjct: 245 RKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTYVNAI 304
Query: 176 NNGAVPTISSSWQSVEEAECRRAYDSATETY 206
++G +P + ++ ++ + E A A Y
Sbjct: 305 SSGDLPCMENAVLALAQIENSAAVQKAIAHY 335
>sp|Q96PP8|GBP5_HUMAN Guanylate-binding protein 5 OS=Homo sapiens GN=GBP5 PE=1 SV=1
Length = 586
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT---TPSELGQFSPIFVWLLRDFYL 58
F+YN + ID+ AID L VT++T ++ R S P++ F P VW LRDF L
Sbjct: 126 FVYNTVNKIDQGAIDLLHNVTELTDLLKARNSPDLDRVEDPADSASFFPDLVWTLRDFCL 185
Query: 59 DLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNENE 118
L D + +TP +YLE +LRP QGS + + N R I+ FP ++CF P +++ +
Sbjct: 186 GLEIDGQLVTPDEYLENSLRPKQGSDQRVQNFNLPRLCIQKFFPKKKCFIFDLP-AHQKK 244
Query: 119 LQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAINN 177
L +L+ + D L PEF + ++F + K + G ++ G L + +Y++AI++
Sbjct: 245 LAQLETLPDDELEPEFVQQVTEFCSYIFSHSMTKTLPGGIMVNGSRLKNLVLTYVNAISS 304
Query: 178 GAVPTISSSWQSVEEAECRRAYDSATETY 206
G +P I ++ ++ + E A A Y
Sbjct: 305 GDLPCIENAVLALAQRENSAAVQKAIAHY 333
>sp|Q8CFB4|GBP5_MOUSE Guanylate-binding protein 5 OS=Mus musculus GN=Gbp5 PE=1 SV=2
Length = 590
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 2 FIYNQMGGIDESAIDRLSLVTQMTKHIRIRASGGKT-----TPSELGQFSPIFVWLLRDF 56
F+YN M ID+ AID L VT++T +R R S P+++ F P VW LRDF
Sbjct: 126 FVYNTMNKIDQGAIDLLHNVTELTDLLRTRNSSDSNQTEGEGPADMS-FFPDLVWTLRDF 184
Query: 57 YLDLVEDNRKITPRDYLEIALRPVQGSGRDIAAKNEIRDSIRALFPDRECFTLVRPLSNE 116
+LDL + IT +YLE +L+ QGS N R I+ FP ++CF P
Sbjct: 185 FLDLQANGHAITSDEYLENSLKLKQGSDERTQTFNLPRLCIQKFFPVKKCFVFDAPALG- 243
Query: 117 NELQRLDQISLDRLRPEFRAGLDALTKFVFERTRPKQV-GATVLTGPVLIGITESYLDAI 175
++L +L +S + L +F L +F +++ K + G + GP L + +Y+DAI
Sbjct: 244 SKLSQLPTLSNEELNSDFVQDLSEFCSHIFTQSKTKTLPGGIQVNGPRLESLVLTYVDAI 303
Query: 176 NNGAVPTISSSWQSVEEAECRRAYDSATETYMSTFDR 212
N+GA+P+I ++ ++ RR +A + + +D+
Sbjct: 304 NSGALPSIENTVVTL----ARRENSAAVQKAIGHYDQ 336
>sp|P25386|USO1_YEAST Intracellular protein transport protein USO1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=USO1 PE=1 SV=2
Length = 1790
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 152/322 (47%), Gaps = 57/322 (17%)
Query: 346 IDQIGSERSSLMLKYRSIEDNMKLLKKQLEDSERYKSEYLKRYDDAINDKKKLADDYTSR 405
ID + E+ + ++ SIE N++ LKK + D E+ K E + + D + D+Y S+
Sbjct: 1003 IDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSS-------KDEYESQ 1055
Query: 406 INNLQ----------GENISLREKSSSLSKTVDSLKNEISDWKRKYDQVLTK----QKAM 451
I+ L+ EN++ K S L+KT + L+ E++ +K +++ TK +KA+
Sbjct: 1056 ISLLKEKLETATTANDENVN---KISELTKTREELEAELAAYKNLKNELETKLETSEKAL 1112
Query: 452 EDQVCSEIEVLKSRSTAAEARLAAAREQALSAQEEVEEWKRKYGVAVREAKAALEKAAIV 511
+ +V E LK E ++Q S + +E ++++ + K E+ A
Sbjct: 1113 K-EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIA-- 1169
Query: 512 QERTSKEMQQREDV--LREEFSSTLAEKEEEMKEKATKIEHAEQCLTTLRLELKAAESKM 569
+KE Q E++ L +E +ST E E +K+K ++E + + + +E +
Sbjct: 1170 ----NKERQYNEEISQLNDEITSTQQEN-ESIKKKNDELEGEVKAMKS------TSEEQS 1218
Query: 570 RSYEVEISSQKLETKELSEKLEAVNAKAQSFEREARIMEQDKVYLEQKYKSEFERFEEVQ 629
+ EI + L+ KEL +K E EA ++E K +SE + +E+Q
Sbjct: 1219 NLKKSEIDALNLQIKELKKKNET---------NEASLLESIK-----SVESETVKIKELQ 1264
Query: 630 ERCKVAEKEAKKATELADRERA 651
+ C EKE +EL D+ +A
Sbjct: 1265 DECNFKEKE---VSELEDKLKA 1283
>sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3
Length = 2871
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 216/458 (47%), Gaps = 60/458 (13%)
Query: 348 QIGSERSSLMLKYR-SIEDNMKLLKKQLEDSERYKSEYLKRYDDAINDKKKLADDYTSRI 406
Q+ R+ ++Y+ S++D K ++ + ++ ER K + D ND+K L D+ +R+
Sbjct: 1453 QVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLK----QLIDKETNDRKCLEDE-NARL 1507
Query: 407 NNLQGENISLREKSSSLSKTVDSLK---NEISDWKRKYDQVLTKQKAMEDQVCS------ 457
+Q L++ +SS ++T++ LK E++ + Y++V ++++ ++DQ +
Sbjct: 1508 QRVQ---YDLQKANSSATETINKLKVQEQELTRLRIDYERV-SQERTVKDQDITRFQNSL 1563
Query: 458 -EIEVLKSRSTAAEARLA-AAREQALS---AQEEVEEWKRKY---GVAVREAKAALEKAA 509
E+++ K + RL A E + +EE+E +R + + LE+A+
Sbjct: 1564 KELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQAIKITNLTQQLEQAS 1623
Query: 510 IVQERTSKEMQQREDVLREEFSSTLAEKE---EEMKEKATKIEHAEQCLTTLRLELKAAE 566
IV++R+ +++Q+ DVL L EK+ EE++ ++++E + L + +K A
Sbjct: 1624 IVKKRSEDDLRQQRDVL----DGHLREKQRTQEELRRLSSEVEALRRQLLQEQESVKQAH 1679
Query: 567 SKMRSYEVEISSQKLETKELSEKLEAVNAKAQSFEREARIMEQDKVYLEQKYKSEFERFE 626
+ ++ I + E ++E + + ++ +E ++E++ L +Y
Sbjct: 1680 LRNEHFQKAIEDKSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDD------ 1733
Query: 627 EVQERCKVAEKEAKKATELADRERAEAAAARKGKSEFENLAMERMAVIERVQRQIESLER 686
R + K AT L R + + + R +E +Q I L+R
Sbjct: 1734 --LRRGRSEADSDKNATILELRSQLQISNNR---------TLE-------LQGLINDLQR 1775
Query: 687 QKTDLTNEVNRIRESELEALSKVALLEARVEEREKEIESLLESNN--EQRASTVKKLEDL 744
++ +L E+ + ++ LEA +++ + + + +E ESLL EQ + +++LED
Sbjct: 1776 ERENLRQEIEKFQKQALEASNRIQESKNQCTQVVQERESLLVKIKVLEQDKARLQRLEDE 1835
Query: 745 LESERRSRAAANAMAERLSLEVQSAQAKLDEMQQELTK 782
L + + A + +RL E Q Q L++ + + ++
Sbjct: 1836 LNRAKSTLEAETRVKQRLECEKQQIQNDLNQWKTQYSR 1873
>sp|Q5U4E6|GOGA4_RAT Golgin subfamily A member 4 OS=Rattus norvegicus GN=Golga4 PE=1
SV=2
Length = 2259
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 32/237 (13%)
Query: 402 YTSRINNLQGENIS----LREKSS----SLSKTVDSL-KNEISDWKRKYDQVLTKQKAME 452
+T R+ NL ++ + LREK +L K +SL + I D K + L K++
Sbjct: 673 WTERLQNLSQQHQAAVEELREKHQQEKDALLKEKESLFQAHIQDMNEKTLEKLDKKQMEL 732
Query: 453 DQVCSEI-EVLKSRSTAAEARLAAAR------EQALSAQEEVEEWKRKYGVAVREAKAAL 505
+ V SE+ E LK+R AE L+ R +QAL A E++E +R + RE +
Sbjct: 733 ESVSSELSEALKARDQLAE-ELSVLRGDADQMKQALEA--ELQEQRRHHQ---REVDSIS 786
Query: 506 EKAAIVQERTSKEMQQREDVLREEFS---STLAEKEEEMKEKATKIEHAEQCLTTLRLEL 562
+ I+ RT K L++E S L EK+E ++E+ ++ + E CL EL
Sbjct: 787 GQQEIIVRRTEK-------ALKDEISQLGGLLKEKDEHLQERQAQVHNLEACLQKSAEEL 839
Query: 563 KAAESKMRSYEVEISSQKLETKELSEKLEAVNAKAQSFEREARIMEQDKVYLEQKYK 619
+ A +K+ + + S+ +T E+L + K E E ++ + V +E + K
Sbjct: 840 QQALAKLDLLQAQQSTTHAQTGAYEEQLAQMQQKVSDLETEKNLLTKQVVEVETQKK 896
>sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN=CGNL1 PE=1 SV=2
Length = 1302
Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 174/390 (44%), Gaps = 71/390 (18%)
Query: 421 SSLSKTVDSLKNEISDWKRKYDQVLTKQKAMEDQVCSEIEVLKSRSTAAEARLAAAREQA 480
+L + V S E+ K +YD L + ++ +EVL SRS +E A +
Sbjct: 765 GALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRV 824
Query: 481 LSAQEEVEEWKRKYGVAVREAKAALEKAAIVQERTSKEMQQREDVLREEFSSTLAEKEEE 540
QEE E+ + ++ ++ R ++ +Q ED+ +E A+ +E
Sbjct: 825 KLLQEENEKLQG--------------RSEELERRVAQLQRQIEDLKGDE-----AKAKET 865
Query: 541 MKEKATKIEHAEQCLTTLRLELKAAESKMRSYEVE-------ISSQKLETKELSEKLEAV 593
+K+ +I E+ L R E K A S R+ E E +S E K+LSEKL+
Sbjct: 866 LKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLKEE 925
Query: 594 NAKAQSFEREARIMEQDKVYLEQKYKSEFERFEEVQERCKVAEKEAKKATELADRERAEA 653
+ + + R ME ++ +L K EK K+ ++ + R
Sbjct: 926 SEQKEQLRRLKNEMENERWHL-----------------GKTIEKLQKEMADIVEASRTST 968
Query: 654 AAARKGKSEFENLAMERMAVIERVQRQIESLERQKTDLT----NEVNRIRESEL------ 703
+ E++ +A ++R Q + ++LE +K+ LT + R+ E EL
Sbjct: 969 LELQNQLDEYKEKNRRELAEMQR-QLKEKTLEAEKSRLTAMKMQDEMRLMEEELRDYQRA 1027
Query: 704 --EALSKVALLEARVEEREKEIESLLESNNEQRASTVKKLEDL-------LESERRSRAA 754
EAL+K LLE +++ E E+E+ ++ R+ VK++ED LE ER +
Sbjct: 1028 QDEALTKRQLLEQTLKDLEYELEAKSHLKDD-RSRLVKQMEDKVSQLEMELEEERNN--- 1083
Query: 755 ANAMAERLSLEVQSAQAKLDEMQQELTKAR 784
++ ++ER+S ++ ++++++ EL + R
Sbjct: 1084 SDLLSERIS----RSREQMEQLRNELLQER 1109
>sp|Q9ESK9|RBCC1_MOUSE RB1-inducible coiled-coil protein 1 OS=Mus musculus GN=Rb1cc1 PE=1
SV=3
Length = 1588
Score = 33.9 bits (76), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 367 MKLLKKQLEDSERYKSEYLKRYDDAINDKKKLADDYTSRINNLQGENISLREKSSSLSKT 426
+ L +K ++ + K EY + D + D +++ ++I L+ +SL E +
Sbjct: 856 ITLKEKHQQELQSLKIEYECKLDALVKD----SEENVNKILKLKENLVSLEEALQNKDNE 911
Query: 427 VDSLKNE----ISDWKRKYDQVLTKQKAMEDQVCSEIEVLKSRSTAAE--ARLAAAREQA 480
S+K+E + + K ++L +K M Q C E+ +SR A E +L + ++
Sbjct: 912 FTSIKHEKDAIVCVQQEKDQKLLEMEKIMHTQHCEIKELKQSREMALEDLKKLHDEKIES 971
Query: 481 LSA------QEEVEEWKRKYGV-AVREAKAALEKAAIVQERTSKEMQQREDVLREEFSST 533
L A Q ++E + + +E + + + E+ KE QQR D + E +ST
Sbjct: 972 LRAEFQCLEQNHLKELEDTLHIRHTQEFEKVMTDHNMSLEKLKKENQQRIDQMLESHAST 1031
Query: 534 LAEKEEEMKEKATKIEHAE--QCLTTLRLELKAAES 567
+ EKE++++E K+ +C + L LK AE+
Sbjct: 1032 IQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAET 1067
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,172,479
Number of Sequences: 539616
Number of extensions: 12003097
Number of successful extensions: 89068
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 4457
Number of HSP's that attempted gapping in prelim test: 58048
Number of HSP's gapped (non-prelim): 16304
length of query: 910
length of database: 191,569,459
effective HSP length: 127
effective length of query: 783
effective length of database: 123,038,227
effective search space: 96338931741
effective search space used: 96338931741
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)