Query 002546
Match_columns 909
No_of_seqs 274 out of 1853
Neff 4.8
Searched_HMMs 29240
Date Tue Mar 26 15:48:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002546.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1267-1271//hhsearch_pdb/002546hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y65_A Kinesin, kinesin heavy 1.0 1 1 495.8 20.6 249 2-254 112-361 (365)
2 3b6u_A Kinesin-like protein KI 1.0 1 1 488.9 19.5 243 2-246 129-372 (372)
3 3bfn_A Kinesin-like protein KI 1.0 1 1 486.3 18.6 244 2-249 123-372 (388)
4 2owm_A Nckin3-434, related to 1.0 1 1 485.3 22.9 233 2-236 161-423 (443)
5 3cob_A Kinesin heavy chain-lik 1.0 1 1 483.1 22.2 247 2-256 104-354 (369)
6 1goj_A Kinesin, kinesin heavy 1.0 1 1 478.6 22.1 234 2-239 109-343 (355)
7 2zfi_A Kinesin-like protein KI 1.0 1 1 475.9 19.3 233 2-234 116-362 (366)
8 1t5c_A CENP-E protein, centrom 1.0 1 1 475.2 22.6 236 2-239 102-341 (349)
9 2vvg_A Kinesin-2; motor protei 1.0 1 1 473.1 20.2 233 2-238 114-347 (350)
10 1x88_A Kinesin-like protein KI 1.0 1 1 471.8 17.9 230 2-234 124-358 (359)
No 1
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=495.84 Aligned_cols=249 Identities=37% Similarity=0.521 Sum_probs=234.2
Q ss_pred CCCHHHHHHHHHHHHHHCC-CCEEEEEEEEEEEECCEEEECCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHH
Q ss_conf 7717999999999988149-965999999999997914564999999953664899985951562899429778999999
Q 002546 2 IGITEYTMSDIYDYIEKHK-EREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLS 80 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~-e~~ftV~iSylEIYNE~VrDLLs~~~~~LkI~eDp~~g~~V~gLtev~V~S~eel~~LL~ 80 (909)
+|||||++++||+.++... +..|.|++||+|||||+|+|||++....+.+++|+.++++|.|++++.|.++++++.+|.
T Consensus 112 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~ 191 (365)
T 2y65_A 112 QGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIE 191 (365)
T ss_dssp BCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHH
T ss_conf 77377999999999983368953999999999987721262258767723788799987842788996587999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99842011333468888874348999997311322489997421000000366762211222223201245442233998
Q 002546 81 TCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLT 160 (909)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkSLla 160 (909)
.|.++|++++|.+|..|||||+||+|+|.+.... ......++|+|||||||||++++++.|.+++|+.+||+||++
T Consensus 192 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~a 267 (365)
T 2y65_A 192 EGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE----NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSA 267 (365)
T ss_dssp HHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT----TCCEEEEEEEEEECCCCCC----------------CCHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECC----CCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 9986466523568887887639999999997058----887868999999799988201218952247899888888999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
Q ss_conf 88899995079987556888455788685208996210674139998886999999999999722324310132369799
Q 002546 161 LGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKA 240 (909)
Q Consensus 161 Lg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s~k~ 240 (909)
||+||.+|+.++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||.|+|.|++|...+...
T Consensus 268 Lg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~ 347 (365)
T 2y65_A 268 LGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEE 347 (365)
T ss_dssp HHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
T ss_conf 99899998527888786635788898776138996379999846752788999999999999721567541178899999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q 002546 241 LVKHLQRELSRLEN 254 (909)
Q Consensus 241 lik~Lq~EI~~Lk~ 254 (909)
+.+.|++|+.+++.
T Consensus 348 ~~~~~~~e~~~~~~ 361 (365)
T 2y65_A 348 WKRRYEKEKEKNAR 361 (365)
T ss_dssp HHHC----------
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=488.86 Aligned_cols=243 Identities=38% Similarity=0.615 Sum_probs=225.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCC-CCCEEEECCCCCEEECCCEEEEECCHHHHHHHHH
Q ss_conf 771799999999998814996599999999999791456499999-9953664899985951562899429778999999
Q 002546 2 IGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADT-SPLRLLDDPERGTIVEKLTEETLKDWNHLKELLS 80 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~e~~ftV~iSylEIYNE~VrDLLs~~~-~~LkI~eDp~~g~~V~gLtev~V~S~eel~~LL~ 80 (909)
+|||||++.+||..++..++..|.|++||+|||||+|+|||++.. ..+.+++++.+|++|.|++++.|.++++++.+|.
T Consensus 129 ~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~ 208 (372)
T 3b6u_A 129 RGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMN 208 (372)
T ss_dssp BCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHH
T ss_conf 88188999999998651457736999989999678889977897777736898799967528988999267999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99842011333468888874348999997311322489997421000000366762211222223201245442233998
Q 002546 81 TCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLT 160 (909)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkSLla 160 (909)
.|.++|++++|.+|..|||||+||+|+|++...... .......|+|+|||||||||+.++++.|.+++|+.+||+||++
T Consensus 209 ~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~-~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~a 287 (372)
T 3b6u_A 209 VGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLD-GENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSA 287 (372)
T ss_dssp HHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC------CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC-CCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999766725455778777642999999999604778-8762678899999798876554457515431467565064999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
Q ss_conf 88899995079987556888455788685208996210674139998886999999999999722324310132369799
Q 002546 161 LGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKA 240 (909)
Q Consensus 161 Lg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s~k~ 240 (909)
||+||.+|++++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|++|..+.+ +
T Consensus 288 Lg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~-~ 366 (372)
T 3b6u_A 288 LGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKD-A 366 (372)
T ss_dssp HHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC------
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHH-H
T ss_conf 999999986389887866220889999986299954899999688524799999999999998645566625577579-9
Q ss_pred HHHHHH
Q ss_conf 999999
Q 002546 241 LVKHLQ 246 (909)
Q Consensus 241 lik~Lq 246 (909)
++++||
T Consensus 367 ~~~~~~ 372 (372)
T 3b6u_A 367 LLREFQ 372 (372)
T ss_dssp ------
T ss_pred HHHHCC
T ss_conf 998519
No 3
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=486.32 Aligned_cols=244 Identities=32% Similarity=0.494 Sum_probs=223.4
Q ss_pred CCCHHHHHHHHHHHHHHC----CCCEEEEEEEEEEEECCEEEECCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHH
Q ss_conf 771799999999998814----9965999999999997914564999999953664899985951562899429778999
Q 002546 2 IGITEYTMSDIYDYIEKH----KEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKE 77 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~----~e~~ftV~iSylEIYNE~VrDLLs~~~~~LkI~eDp~~g~~V~gLtev~V~S~eel~~ 77 (909)
+|||||++.+||+.++.. ....|.|++||+|||||+|+|||++....+.+++|+.++++|.|++++.|.++++++.
T Consensus 123 ~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ 202 (388)
T 3bfn_A 123 PGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFER 202 (388)
T ss_dssp BCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBCCCEECTTSCEECTTCCCEECCSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHH
T ss_conf 64168999999999987423377714899999999988864560016788845998699998853605999589999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999842011333468888874348999997311322489997421000000366762211222223201245442233
Q 002546 78 LLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRS 157 (909)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkS 157 (909)
+|..|.++|++++|.+|..|||||+||+|+|++.... .......++|+|||||||||..++++.|.+++|+++||+|
T Consensus 203 ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~---~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkS 279 (388)
T 3bfn_A 203 HFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERL---APFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTS 279 (388)
T ss_dssp HHHHHTC-----------CGGGSEEEEEEEEEEEESS---TTCCEEEEEEEEEECCCTTC--------------CCCCHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCC---CCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999750265223647787777739999999982268---8873368899999898776655456755114777675063
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 99888899995079987556888455788685208996210674139998886999999999999722324310132369
Q 002546 158 LLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMS 237 (909)
Q Consensus 158 LlaLg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s 237 (909)
|++||+||.+|+.++. ||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|++|...+
T Consensus 280 L~aLg~vI~aL~~~~~-hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~ 358 (388)
T 3bfn_A 280 LFVLGKVVDALNQGLP-RVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQ 358 (388)
T ss_dssp HHHHHHHHHHHHTTCS-CCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC----------
T ss_pred HHHHHHHHHHHHCCCC-CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 9999999999966999-886756588999998608996289999979850008999999999999851757673567899
Q ss_pred HHHH--HHHHHHHH
Q ss_conf 7999--99999999
Q 002546 238 DKAL--VKHLQREL 249 (909)
Q Consensus 238 ~k~l--ik~Lq~EI 249 (909)
..++ ++.+++|+
T Consensus 359 ~~~l~~~k~~~~~l 372 (388)
T 3bfn_A 359 PHALGPVKLSQKEL 372 (388)
T ss_dssp --------------
T ss_pred HHHHHHHHHHHHHH
T ss_conf 89998878899986
No 4
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=485.29 Aligned_cols=233 Identities=36% Similarity=0.572 Sum_probs=213.4
Q ss_pred CCCHHHHHHHHHHHHHHC----CCCEEEEEEEEEEEECCEEEECCCCCC-----CCCEEEECCCCCEEECCCEEEEECCH
Q ss_conf 771799999999998814----996599999999999791456499999-----99536648999859515628994297
Q 002546 2 IGITEYTMSDIYDYIEKH----KEREFVLKFSAMEIYNESVRDLLSADT-----SPLRLLDDPERGTIVEKLTEETLKDW 72 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~----~e~~ftV~iSylEIYNE~VrDLLs~~~-----~~LkI~eDp~~g~~V~gLtev~V~S~ 72 (909)
+|||||++++||+.|+.. ++..|.|++||+|||||+|+|||++.. ..+++++|+.+|++|+||+++.|.++
T Consensus 161 ~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~ 240 (443)
T 2owm_A 161 PGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGL 240 (443)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCH
T ss_conf 75379999999998876521367734999999999988975685676345786534430377999995268779982899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 78999999998420113334688888743489999973113224899974210000003667622112222232012454
Q 002546 73 NHLKELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGC 152 (909)
Q Consensus 73 eel~~LL~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~ 152 (909)
++++.+|..|.++|++++|.||..|||||+||+|+|++..............++|+|||||||||+.++++.|.+++|+.
T Consensus 241 ~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~ 320 (443)
T 2owm_A 241 EEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGS 320 (443)
T ss_dssp HHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------C
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 99999999997337863375877667771999999998603567887406887799997988753565677664121100
Q ss_pred HHHHHHHHHHHHHHHHCCCCC---------------------CCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHH
Q ss_conf 422339988889999507998---------------------75568884557886852089962106741399988869
Q 002546 153 HINRSLLTLGTVIRKLSKGRN---------------------GHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVE 211 (909)
Q Consensus 153 ~INkSLlaLg~VI~ALs~~k~---------------------~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~e 211 (909)
+||+||++||+||.+|+.++. .||||||||||+||||+|||||+|+|||||||+ +++
T Consensus 321 ~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ 398 (443)
T 2owm_A 321 NINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYD 398 (443)
T ss_dssp CSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHH
T ss_pred HHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHH
T ss_conf 105789999999999860455555444322234333445677745574547688888862799708999981643--078
Q ss_pred HHHHHHHHHHHHHCCCCCCEECCCC
Q ss_conf 9999999999972232431013236
Q 002546 212 QSRNTLLFASCAKEVTTNAQVNIVM 236 (909)
Q Consensus 212 ETLsTLrFAsRAK~Ikn~p~vN~~~ 236 (909)
||++||+||+|||+|+|+|++|.+.
T Consensus 399 ETlsTLrfA~rak~I~n~~~vN~~d 423 (443)
T 2owm_A 399 ETLSTLRYADQAKRIRTRAVVNQVD 423 (443)
T ss_dssp HHHHHHHHHHHHTTCEECCCCCCC-
T ss_pred HHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 9999999999985445633351357
No 5
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=483.13 Aligned_cols=247 Identities=34% Similarity=0.533 Sum_probs=225.1
Q ss_pred CCCHHHHHHHHHHHHHHCCC-CEEEEEEEEEEEECCEEEECCCCCC---CCCEEEECCCCCEEECCCEEEEECCHHHHHH
Q ss_conf 77179999999999881499-6599999999999791456499999---9953664899985951562899429778999
Q 002546 2 IGITEYTMSDIYDYIEKHKE-REFVLKFSAMEIYNESVRDLLSADT---SPLRLLDDPERGTIVEKLTEETLKDWNHLKE 77 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~e-~~ftV~iSylEIYNE~VrDLLs~~~---~~LkI~eDp~~g~~V~gLtev~V~S~eel~~ 77 (909)
+|||||++.+||+.++...+ ..|.|++||+|||||+|+|||++.. ..+.+++|+.++++|.|++++.|.++++++.
T Consensus 104 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ 183 (369)
T 3cob_A 104 PGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKT 183 (369)
T ss_dssp BCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCEECCCCEEEEECCHHHHHH
T ss_conf 86258999999999874135752677899987707632345787556776427899799988805987998089999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999842011333468888874348999997311322489997421000000366762211222223201245442233
Q 002546 78 LLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRS 157 (909)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkS 157 (909)
+|..|.++|++++|.+|..|||||+||+|+|++... .......|+|+|||||||||+.++++.|.+++|+++||+|
T Consensus 184 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkS 259 (369)
T 3cob_A 184 IIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNL----QTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKS 259 (369)
T ss_dssp HHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEET----TTCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHH
T ss_pred HHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECC----CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999875255230344778777633899999998527----8772788899999688787544347630234778787788
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 99888899995079987556888455788685208996210674139998886999999999999722324310132369
Q 002546 158 LLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMS 237 (909)
Q Consensus 158 LlaLg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s 237 (909)
|++||+||.+|+.++ .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|.+|...
T Consensus 260 L~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~- 337 (369)
T 3cob_A 260 LSALGDVISALSSGN-QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS- 337 (369)
T ss_dssp HHHHHHHHHHHHTTC-SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC-
T ss_pred HHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH-
T ss_conf 999999999986489-967874777788788762898527999994772002899999999999986545677415788-
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 7999999999999999998
Q 002546 238 DKALVKHLQRELSRLENEL 256 (909)
Q Consensus 238 ~k~lik~Lq~EI~~Lk~eL 256 (909)
..+..|+++++.|+.++
T Consensus 338 --~ei~~L~~~l~~~~~~~ 354 (369)
T 3cob_A 338 --KEVARLKKLVSYWKEQA 354 (369)
T ss_dssp --HHHHHHHHHTTCC----
T ss_pred --HHHHHHHHHHHHHHHHC
T ss_conf --99999999999999764
No 6
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=478.57 Aligned_cols=234 Identities=36% Similarity=0.547 Sum_probs=221.2
Q ss_pred CCCHHHHHHHHHHHHHHCC-CCEEEEEEEEEEEECCEEEECCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHH
Q ss_conf 7717999999999988149-965999999999997914564999999953664899985951562899429778999999
Q 002546 2 IGITEYTMSDIYDYIEKHK-EREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLS 80 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~-e~~ftV~iSylEIYNE~VrDLLs~~~~~LkI~eDp~~g~~V~gLtev~V~S~eel~~LL~ 80 (909)
+|||||++++||+.+.... +..|.|++||+|||||+|+|||++....+.+++++.+|++|+|++++.|.++++++.+|.
T Consensus 109 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~ 188 (355)
T 1goj_A 109 RGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMR 188 (355)
T ss_dssp BCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHH
T ss_conf 87067999999999871456850899999999978977884457667852688589999606877995799999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99842011333468888874348999997311322489997421000000366762211222223201245442233998
Q 002546 81 TCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLT 160 (909)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkSLla 160 (909)
.|.++|++++|.+|..|||||+||+|+|.+.... ......++|+|||||||||++++++.|.+++|+++||+||++
T Consensus 189 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~a 264 (355)
T 1goj_A 189 RGGNARAVAATNMNQESSRSHSIFVITITQKNVE----TGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSA 264 (355)
T ss_dssp HHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT----TTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCC----CCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9975247233447898777609999999996068----895566579999898877443246602667888765167999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHH
Q ss_conf 8889999507998755688845578868520899621067413999888699999999999972232431013236979
Q 002546 161 LGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDK 239 (909)
Q Consensus 161 Lg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s~k 239 (909)
||+||.+|+.++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|++|...+..
T Consensus 265 Lg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 265 LGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp HHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHH
T ss_conf 9999999864899988775579999999972899768999997963026999999999999972366775567879999
No 7
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=475.91 Aligned_cols=233 Identities=37% Similarity=0.585 Sum_probs=214.8
Q ss_pred CCCHHHHHHHHHHHHHHCC--CCEEEEEEEEEEEECCEEEECCCCCC-CCCEEEECCCCCEEECCCEEEEECCHHHHHHH
Q ss_conf 7717999999999988149--96599999999999791456499999-99536648999859515628994297789999
Q 002546 2 IGITEYTMSDIYDYIEKHK--EREFVLKFSAMEIYNESVRDLLSADT-SPLRLLDDPERGTIVEKLTEETLKDWNHLKEL 78 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~--e~~ftV~iSylEIYNE~VrDLLs~~~-~~LkI~eDp~~g~~V~gLtev~V~S~eel~~L 78 (909)
+|||||++++||+.++... +..|.|++||+|||||+|+|||++.. ..+++++|+..|++|+|++++.|.++++++.+
T Consensus 116 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~l 195 (366)
T 2zfi_A 116 QGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDL 195 (366)
T ss_dssp BCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEECCCCCCCCCCEEEECCCCCEEEECCEEEEECCHHHHHHH
T ss_conf 86699999999998764026770699999999960884789123556788568886999879769899997799999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99998420113334688888743489999973113224899974210000003667622112222232012454422339
Q 002546 79 LSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSL 158 (909)
Q Consensus 79 L~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkSL 158 (909)
|..|.++|++++|.+|..|||||+||+|+|++..............++|+|||||||||+.++++.|.+++|+.+||+||
T Consensus 196 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 275 (366)
T 2zfi_A 196 MDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSL 275 (366)
T ss_dssp HHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99976224611265777777645999999999604677875413676899996898864554678763004465676789
Q ss_pred HHHHHHHHHHCCC-----------CCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 9888899995079-----------98755688845578868520899621067413999888699999999999972232
Q 002546 159 LTLGTVIRKLSKG-----------RNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVT 227 (909)
Q Consensus 159 laLg~VI~ALs~~-----------k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ik 227 (909)
++||+||.+|+.+ +..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+
T Consensus 276 ~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~ 355 (366)
T 2zfi_A 276 TTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIR 355 (366)
T ss_dssp HHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 99999999987123454333345667746433328899999872899609999996887334999999999999984055
Q ss_pred CCCEECC
Q ss_conf 4310132
Q 002546 228 TNAQVNI 234 (909)
Q Consensus 228 n~p~vN~ 234 (909)
|.|.++.
T Consensus 356 ~~~~~~~ 362 (366)
T 2zfi_A 356 NTVSVNH 362 (366)
T ss_dssp -------
T ss_pred CCCCCCC
T ss_conf 8888999
No 8
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=475.21 Aligned_cols=236 Identities=46% Similarity=0.696 Sum_probs=218.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCC--CCCEEEECCCCCEEECCCEEEEECCHHHHHHHH
Q ss_conf 771799999999998814996599999999999791456499999--995366489998595156289942977899999
Q 002546 2 IGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADT--SPLRLLDDPERGTIVEKLTEETLKDWNHLKELL 79 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~e~~ftV~iSylEIYNE~VrDLLs~~~--~~LkI~eDp~~g~~V~gLtev~V~S~eel~~LL 79 (909)
+|||||++++||+.+++.++..|.|++||+|||||+|+|||++.. .++.+++|+.++++|+|++++.|.++++++.+|
T Consensus 102 ~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll 181 (349)
T 1t5c_A 102 LGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWI 181 (349)
T ss_dssp BCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHH
T ss_conf 74588999999999974768867999889998487778866787778774699889999874488799868999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99984201133346888887434899999731132248-99974210000003667622112222232012454422339
Q 002546 80 STCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIG-NDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSL 158 (909)
Q Consensus 80 ~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~-~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkSL 158 (909)
..|.++|++++|.+|..|||||+||+|+|++....... .......|+|+|||||||||+.++++.|.+++|+++||+||
T Consensus 182 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 261 (349)
T 1t5c_A 182 TKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSL 261 (349)
T ss_dssp HHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 97523345233657788887639999999985168876767637899999997998753221478641113354776899
Q ss_pred HHHHHHHHHHCCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCC
Q ss_conf 98888999950799-87556888455788685208996210674139998886999999999999722324310132369
Q 002546 159 LTLGTVIRKLSKGR-NGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMS 237 (909)
Q Consensus 159 laLg~VI~ALs~~k-~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s 237 (909)
++||+||.+|+.++ ..||||||||||+||||+|||||+|+|||||||+ +++||++||+||+|||+|+|.|++|....
T Consensus 262 ~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~ 339 (349)
T 1t5c_A 262 FILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVST 339 (349)
T ss_dssp HHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC-
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 9999999998556877777655637789999861899629999994777--78999999999999745366765366788
Q ss_pred HH
Q ss_conf 79
Q 002546 238 DK 239 (909)
Q Consensus 238 ~k 239 (909)
..
T Consensus 340 ~~ 341 (349)
T 1t5c_A 340 DE 341 (349)
T ss_dssp --
T ss_pred CC
T ss_conf 88
No 9
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=473.08 Aligned_cols=233 Identities=37% Similarity=0.570 Sum_probs=217.0
Q ss_pred CCCHHHHHHHHHHHHHHC-CCCEEEEEEEEEEEECCEEEECCCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHH
Q ss_conf 771799999999998814-9965999999999997914564999999953664899985951562899429778999999
Q 002546 2 IGITEYTMSDIYDYIEKH-KEREFVLKFSAMEIYNESVRDLLSADTSPLRLLDDPERGTIVEKLTEETLKDWNHLKELLS 80 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~-~e~~ftV~iSylEIYNE~VrDLLs~~~~~LkI~eDp~~g~~V~gLtev~V~S~eel~~LL~ 80 (909)
+|||||++++||+.++.. .+..|.|++||+|||||+|+|||++ ...+.+++|+.+|++|.|++++.|.++++++.+|.
T Consensus 114 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~-~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~ 192 (350)
T 2vvg_A 114 PGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN-NTKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMD 192 (350)
T ss_dssp BCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-EEEECEEEETTTEEEETTCCCEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCC-CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHH
T ss_conf 75588999999999986536875799999999928788885567-76842567489988815877997499999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99842011333468888874348999997311322489997421000000366762211222223201245442233998
Q 002546 81 TCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINRSLLT 160 (909)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INkSLla 160 (909)
.|.++|++++|.+|..|||||+||+|+|++.... ........++|+|||||||||++++++.|.+++|+.+||+||++
T Consensus 193 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~a 270 (350)
T 2vvg_A 193 KGFANRHVAATQMNDTSSRSHSIFMVRIECSEVI--ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSA 270 (350)
T ss_dssp HHHHHC----------CTTCEEEEEEEEEEEEC------CEEEEEEEEEEECCCCCC---------------CTTHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECC--CCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9984146001457888876529999999995046--78761788999999689887554456507788999887589999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCH
Q ss_conf 888999950799875568884557886852089962106741399988869999999999997223243101323697
Q 002546 161 LGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSD 238 (909)
Q Consensus 161 Lg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~~~s~ 238 (909)
||+||.+|++++ .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|++|..+.+
T Consensus 271 Lg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~ 347 (350)
T 2vvg_A 271 LGLVISKLVEGA-THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKD 347 (350)
T ss_dssp HHHHHHHHHHTC-SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTT
T ss_pred HHHHHHHHHCCC-CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHH
T ss_conf 999999997389-98876455888998986089962899999688400189999999999998544566612578201
No 10
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=471.82 Aligned_cols=230 Identities=39% Similarity=0.593 Sum_probs=212.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCC---CCCEEEECCC--CCEEECCCEEEEECCHHHHH
Q ss_conf 771799999999998814996599999999999791456499999---9953664899--98595156289942977899
Q 002546 2 IGITEYTMSDIYDYIEKHKEREFVLKFSAMEIYNESVRDLLSADT---SPLRLLDDPE--RGTIVEKLTEETLKDWNHLK 76 (909)
Q Consensus 2 ~GIIprai~dLF~~Ie~~~e~~ftV~iSylEIYNE~VrDLLs~~~---~~LkI~eDp~--~g~~V~gLtev~V~S~eel~ 76 (909)
+|||||++++||+.++. .+..|.|++||+|||||+|+|||++.. ..+.+++|+. +|++|+|++++.|.++++++
T Consensus 124 ~Giipr~~~~lF~~i~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~ 202 (359)
T 1x88_A 124 AGIIPRTLHQIFEKLTD-NGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVY 202 (359)
T ss_dssp BCHHHHHHHHHHHHTSS-SSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHH
T ss_pred CCCHHHHHHHHHHHHHC-CCCEEEEEEEEEEEECCEEEEHHCCCCCCCCCCEEEECCCCCCCEEECCCEEEECCCHHHHH
T ss_conf 87038999999987741-58259999999999576100121156555666058865577898898287899849999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999984201133346888887434899999731132248999742100000036676221122222320124544223
Q 002546 77 ELLSTCEAQRQIGETSLNETSSRSHQILRLTVESSACEFIGNDPSSLTATVNFVDLAGSERASQALSAGTRLKEGCHINR 156 (909)
Q Consensus 77 ~LL~~G~~~R~~~sT~lN~~SSRSH~IftI~Ie~~~~e~~~~~~s~~~SkL~fVDLAGSER~skt~s~G~rlkEg~~INk 156 (909)
.+|..|.++|++++|.+|..|||||+||+|+|.+...... +......++|+|||||||||++++++.|.+++|+.+||+
T Consensus 203 ~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~-~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INk 281 (359)
T 1x88_A 203 QILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTID-GEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQ 281 (359)
T ss_dssp HHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTT-SCEEEEEEEEEEEECCCCCC---------------CCCH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC-CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9999877514612254778777762899999987435578-871377889999818998735435886320177765307
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECC
Q ss_conf 399888899995079987556888455788685208996210674139998886999999999999722324310132
Q 002546 157 SLLTLGTVIRKLSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNI 234 (909)
Q Consensus 157 SLlaLg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~lIatISPs~~~~eETLsTLrFAsRAK~Ikn~p~vN~ 234 (909)
||++||+||.+|+.+. .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|++|+
T Consensus 282 SL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 282 SLLTLGRVITALVERT-PHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp HHHHHHHHHHHHHTTC-SCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred HHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 8999999999986479-9776225668899999758997299999978974568999999999999865667661477
Done!