Query 002547
Match_columns 909
No_of_seqs 261 out of 1122
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 02:12:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02701 alpha-mannosidase 100.0 5E-190 1E-194 1722.6 91.9 905 1-906 142-1050(1050)
2 KOG1958 Glycosyl hydrolase, fa 100.0 2E-183 4E-188 1532.6 58.9 851 1-905 265-1128(1129)
3 KOG1959 Glycosyl hydrolase, fa 100.0 7E-169 2E-173 1411.4 60.3 798 1-908 147-996 (996)
4 PRK09819 alpha-mannosidase; Pr 100.0 6.9E-75 1.5E-79 716.0 69.4 558 1-705 105-708 (875)
5 KOG4342 Alpha-mannosidase [Car 100.0 1.6E-51 3.4E-56 447.5 38.9 529 2-709 382-933 (1078)
6 PF07748 Glyco_hydro_38C: Glyc 100.0 2.1E-44 4.6E-49 420.5 36.0 421 387-902 1-457 (457)
7 COG0383 AMS1 Alpha-mannosidase 100.0 1.3E-31 2.7E-36 326.5 30.8 486 2-705 297-791 (943)
8 PF01074 Glyco_hydro_38: Glyco 100.0 1.2E-30 2.5E-35 283.4 12.4 173 1-239 100-275 (275)
9 PF09261 Alpha-mann_mid: Alpha 99.9 3.1E-23 6.6E-28 180.1 5.1 80 244-329 1-80 (80)
10 smart00872 Alpha-mann_mid Alph 99.8 1.7E-21 3.6E-26 168.8 7.6 79 245-329 1-79 (79)
11 COG0383 AMS1 Alpha-mannosidase 98.6 1.6E-08 3.5E-13 125.0 2.4 253 7-331 110-389 (943)
12 PF03065 Glyco_hydro_57: Glyco 70.7 3.4 7.3E-05 46.8 3.2 47 2-49 152-198 (360)
13 KOG4120 G/T mismatch-specific 55.0 43 0.00094 36.1 7.5 101 2-156 226-330 (426)
14 PRK12270 kgd alpha-ketoglutara 53.5 48 0.001 41.7 8.5 70 132-209 991-1061(1228)
15 PF14849 YidC_periplas: YidC p 29.9 7E+02 0.015 26.5 13.5 24 499-522 2-25 (270)
16 TIGR03593 yidC_nterm membrane 21.7 1.2E+03 0.025 26.3 14.8 27 497-523 74-100 (366)
17 PHA02100 hypothetical protein 20.0 56 0.0012 28.6 1.2 18 5-30 65-82 (112)
No 1
>PLN02701 alpha-mannosidase
Probab=100.00 E-value=5.3e-190 Score=1722.65 Aligned_cols=905 Identities=77% Similarity=1.273 Sum_probs=789.1
Q ss_pred ChhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceEEe
Q 002547 1 MEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVH 80 (909)
Q Consensus 1 ~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~th 80 (909)
|+||+||+++||+.|++||+|||||||++|||||++|||+++||+|+||++|+.|+.++.+||+||++|++++|++||||
T Consensus 142 ~~G~~~l~~~fG~~P~~~W~iDpFGhs~~~P~Ll~~~G~~~~~~~R~~y~~k~~~~~~~~~eF~W~~s~~~~dgs~Ift~ 221 (1050)
T PLN02701 142 TEGNMWLNDTIGVAPKNSWAIDPFGYSSTMAYLLRRMGFENMLIQRTHYEVKKELAQNKNLEYIWRQSWDAEETTDIFVH 221 (1050)
T ss_pred HhhhHHHHhhcCCCCCcCccCCCCCCCHHHHHHHHhCCCceEEEeccchHHHHHHhhcCCceEEEeCCCCCCCCCEEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred eCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCC
Q 002547 81 MMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDD 160 (909)
Q Consensus 81 ~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~G~D 160 (909)
+||+|+|++||+|||+|+|||||||.|++|++++.|||+++|..++++||++||++|++++++++..|++|+||+|+|||
T Consensus 222 ~lp~y~Y~~p~~~~p~p~~c~~Fd~~~~~~~~~~~cp~~~~p~~~~~~nv~~r~~~~~~~~~~~s~~~rtn~iL~p~GdD 301 (1050)
T PLN02701 222 MMPFYSYDIPHTCGPEPAICCQFDFARMRGFQYELCPWGKHPVETNDENVQERAMKLLDQYRKKSTLYRTNTLLVPLGDD 301 (1050)
T ss_pred EccccccCcccccCCCcccccccccccccccccccCcccCCccccchhHHHHHHHHHHHHHHHhhccccCCeEEEecCCC
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcccccc
Q 002547 161 FRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYAD 240 (909)
Q Consensus 161 f~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDffpya~ 240 (909)
|+|...++|..||+||++||+|||++++.+++++||||++||++|+++..+.+++.+||++++....||+++||||||++
T Consensus 302 f~~~~~~~a~~~f~n~dkli~~iN~~~~~~~~i~~ST~~~Yf~~l~~~~~~~~~~~~ge~~~~~~~~~p~~~gDff~Ya~ 381 (1050)
T PLN02701 302 FRYISIDEAEAQFRNYQKLFDYINSNPSLKAEVKFGTLEDYFSTLRDEADRINYSRPGEVGSGEVPGFPSLSGDFFTYAD 381 (1050)
T ss_pred CCCcchhHHHHHHHhHHHHHHHHhhCcccCceEEECCHHHHHHHHHhhhccccccccccccccccCCCceeccccccccc
Confidence 99988789999999999999999999877799999999999999998765556777788877666789999999999999
Q ss_pred cCCCceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCCchhh
Q 002547 241 RQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDH 320 (909)
Q Consensus 241 ~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTsk~~ 320 (909)
+.++||||||||||++|+++|++|++||+||+|+++|...+....+..++....+.|+.|||+|+++|||||||||||++
T Consensus 382 ~~~~yWTGyyTSRp~lK~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~L~~~wk~l~~~QhHDaItGTsk~~ 461 (1050)
T PLN02701 382 RQQDYWSGYYVSRPFFKAVDRVLEQTLRAAEILFSFLLGYCRRFQCEKLPTSFSYKLTAARRNLALFQHHDGVTGTAKDH 461 (1050)
T ss_pred ccccccceeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCChhhHHHHHHHHHHHHhhccCcCcCccchHH
Confidence 99999999999999999999999999999999999975533222355566545678999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCCccce
Q 002547 321 VVLDYGTRMHTSLQDLQIFMSKAIEVLLGIR-ERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTR 399 (909)
Q Consensus 321 V~~Dy~~rl~~~~~~~~~v~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r 399 (909)
|++||..||.+|+..++.+++.+++.|+... .+.+.....|+.|+.+.+++.||++.++.+..++...|+|||||+|+|
T Consensus 462 V~~Dy~~rl~~~~~~~~~~~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r 541 (1050)
T PLN02701 462 VVVDYGTRMHTSLQDLQIFMSAAVEVLLGIRHEKSDQTPSWFEPEQSRSKYDMLPVHKVINLREGKAHRVVFFNPLEQTR 541 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccccCCCceEEEEECCCCcee
Confidence 9999999999999999999999999998642 122223446888888899999998876666556678999999999999
Q ss_pred eEEEEEEEcCCcEEEEcCCCeEeeeeeccccccCCcccccCcEEEEEEEeeCCCceEEEEEEeCccCcCcCccceeee-c
Q 002547 400 EEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKY-S 478 (909)
Q Consensus 400 ~~~V~v~V~~~~~~V~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~-~ 478 (909)
+++|+|+|+.+.+.|+|++|++|++|++|+|...........++|+|.|+||||||++|+|......+....++.+.. .
T Consensus 542 ~~vV~v~V~~~~~~V~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~l~F~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~ 621 (1050)
T PLN02701 542 EEVVMVVVDRPAVCVFDSNWTCVPSQISPEWQHDGEKLFTGRHRLYWKASVPALGLETYFIANGNVSCEKAVPAKLKVFN 621 (1050)
T ss_pred eEEEEEEecCCcEEEEcCCCCEEeEEEeccccccccccccceEEEEEEEecCCceeEEEEEEEcCCCccccccccccccc
Confidence 999999999999999999999999999998765333344568999999999999999999987643332222222211 1
Q ss_pred CCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEE-ccCCceEEEEEEEEEeccCCCceeEEccCCCCCCcc
Q 002547 479 SDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSSQGSGAYLFMPNGDAHPIT 557 (909)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~fd~~~G~l~si~-~k~g~~~~v~~~f~~Y~~~~sGAYiF~P~~~~~~~~ 557 (909)
....++++.++.+.....+.++|||++++|+||++||+|++|. +++|....+.++|.+|.+++||||+|+|++.+.++.
T Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~ieN~~lkl~Fd~~TG~L~si~~~~~g~~~~v~q~f~~Y~s~~SGAYiFrP~~~~~p~~ 701 (1050)
T PLN02701 622 SDDKFPCPEPYSCSKLEGDTVEISNSHQTLGFDVKTGLLRKIKIHKNGSETVVGEEIGMYSSQGSGAYLFKPDGEAQPIV 701 (1050)
T ss_pred ccccccccccccccccCCCcEEEecCeEEEEEcCCCCceeEEEecccCceecceeeeeeecCCCCcceEEcCCCCCcccC
Confidence 2222333334444334445789999999999999999999998 467888899999999999999999999999887777
Q ss_pred cCCceEEEEeCCceEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCCceEEEEEEEeeCCCCeE
Q 002547 558 EAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRIF 637 (909)
Q Consensus 558 ~~~~~~~v~~G~l~~ev~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iE~e~~Vd~~~~~~~~~el~~rf~t~i~s~~~f 637 (909)
.....+.|++||++++|++.++..|+.++++|++|||++.+.+++..||++|+||++|.+..|||++|||.|+|+|+++|
T Consensus 702 ~~~~~~~v~~Gplv~eV~~~~~~~~~~s~isQ~iRLY~~~~~~~~~~vE~e~~V~~ip~d~~~kEii~R~~T~i~s~~~F 781 (1050)
T PLN02701 702 QAGGLVVVSEGPLVQEVHSVPKTKWEKSPLSRSTRLYHGGKSVQDLSVEKEYHVELLGHDFNDKELIVRFKTDIDNKRVF 781 (1050)
T ss_pred CCCceEEEEeCCEEEEEEEEeecccCCcceEEEEEEecCCCccccceEEEEEEecCcccCCCCcEEEEEEeecccCCCeE
Confidence 66666778999999999997655677789999999999855555568999999999987778999999999999999999
Q ss_pred EEcCCCCcceecccCCCCCCccceeccCceEEEecCCCceeEEeeccccceeecCCCeEEEEEeecccCcCCCCCCcCcc
Q 002547 638 YSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRDDGRGLGQGVL 717 (909)
Q Consensus 638 ytDsnG~~~i~R~~~~~~p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~lElml~Rr~~~DD~rGvge~l~ 717 (909)
|||+|||||+||++|+++|++||||||+++|||+|++++||||||||++||||+++|+||||||||+++||+|||||||+
T Consensus 782 YTDsNG~qm~kR~~~~~~Pv~gNYYPv~s~a~IqD~~~~rltvltdrs~G~sSl~~GqLEiMLhRRLl~DD~rGvge~l~ 861 (1050)
T PLN02701 782 YSDLNGFQMSRRETYDKIPLQGNYYPMPSLAFLQGSNGQRFSVHSRQSLGVASLKNGWLEIMLDRRLVQDDGRGLGQGVM 861 (1050)
T ss_pred EEcCccceeeeecccccCccccccccccceEEEEcCCCCeEEEEeccCcccccCCCcEEEEEEEeecccccCcccccccc
Confidence 99999999999999999999999999999999999545899999999999999999999999999999999999999999
Q ss_pred cCcceeEEEEEEEeeccCCCcccCCCCcccCchhhhhhhhccccCcceeeeccCCCCCcCCC-CCCCcCCCCCCCCCceE
Q 002547 718 DNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQP-PPRSFSPLAGSLPCDLH 796 (909)
Q Consensus 718 d~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~~l~~P~~~~~~~~~~~~~~~~-~~~~~s~l~~~LP~~vh 796 (909)
||+++.++|||++|.+.+.+.. .+......|||++|.++..|+||+++|+.++........ ...+|++|.++||||+|
T Consensus 862 dnk~~~~~f~ll~e~~~~~~~~-~~~~~~~~~Sl~sh~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~lpcD~h 940 (1050)
T PLN02701 862 DNRPMNVVFHLLLESNISSSPP-ASNPLPLQPSLLSHRVGAHLNYPMHAFLAKKPQATSVENPQDTSFAPLAKPLPCDLH 940 (1050)
T ss_pred ccccccceEEEEEecccccCCC-CCCCCcCCccHHHHHHHHhhcCCchhhcccCccccccccccccccccccCCCCCcEE
Confidence 9999999999999988763323 233333339999999999999999999864433322211 12789999999999999
Q ss_pred EEeeecCCCCCCCCCCCCccceEEEEEeeccccccccCCCCcccccccccccHhhhcccCccceEEEccccCcccccccc
Q 002547 797 IVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGML 876 (909)
Q Consensus 797 Lltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~ 876 (909)
|||||++++.++........++++||||.|+||+|+.+++.+|++...++|+|.+||+++.|.++++||||+++++.+++
T Consensus 941 lv~lrt~~~~~~~~~~~~~~~~~~~l~r~~~d~~~~~~~~~~c~~~~~~~~~~~~lf~~l~~~~~~~tsl~~~~~~~~~~ 1020 (1050)
T PLN02701 941 IVNFKVPRPSKYSQQEAEDPRFGLLLQRRGWDSSYCRKGGTQCTTLANEPVNLFDMFKDLAVSKVKATSLNLLHDDAEML 1020 (1050)
T ss_pred EEEeeccCCcccccccCCCccEEEEEEecccCcccccCCCccCcccCCcccchhhhhcccceeeeecccccccccchhhc
Confidence 99999999875422222235689999999999999999988898765556999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCceEeccceeeEEEEEEe
Q 002547 877 GYPEQLEDVSQDGQVTIAPMEIQAYKLEMR 906 (909)
Q Consensus 877 ~~~~~~~~~~~~~~v~l~Pmeirtf~~~~~ 906 (909)
+++.+.....+.+.|.|+||||+||+++++
T Consensus 1021 ~~~~~~~~~~~~~~i~l~pmei~~~~~~~~ 1050 (1050)
T PLN02701 1021 GYRKQAGSAAQEGIVLISPMEIQAYKLDLR 1050 (1050)
T ss_pred cccccccccCCccceeeccceeeeEEEecC
Confidence 888777666778899999999999999874
No 2
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-183 Score=1532.57 Aligned_cols=851 Identities=47% Similarity=0.810 Sum_probs=739.2
Q ss_pred ChhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceEEe
Q 002547 1 MEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVH 80 (909)
Q Consensus 1 ~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~th 80 (909)
+|||+||++++|++|++||.|||||||++|||||+++||++++|||+||.+|+.++.+|++||+||+.||..+.++||||
T Consensus 265 iEGh~Wl~~~igv~P~s~WaiDPFG~S~TmpYLL~~ag~~~mlIQRvHYavKk~lA~qk~leF~WRQ~wds~~~tDl~tH 344 (1129)
T KOG1958|consen 265 IEGHQWLKNNIGVTPQSGWAIDPFGYSSTMPYLLRRAGFENMLIQRVHYAVKKELAQQKSLEFIWRQYWDSTGDTDLLTH 344 (1129)
T ss_pred hhhhhHHhccCCCCCCcccccCCCCCCcchHHHHhhcCchhHHHHHHHHHHHHHHHHhcccceeehhhccCCCCcchhee
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred eCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCC
Q 002547 81 MMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDD 160 (909)
Q Consensus 81 ~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~G~D 160 (909)
|||||||||||||||+|+|||||||+||+|++.+ |||+.+|..|+++||++||++|+|||+|++++|++|++|+|+|||
T Consensus 345 mMPFysYDIphTCGPdP~ICCqFDFkRmpg~~~~-Cpw~vpP~~It~~NVa~rA~~LldQyrKkS~Lfr~nVlLiPlGDD 423 (1129)
T KOG1958|consen 345 MMPFYSYDIPHTCGPDPKICCQFDFKRMPGGGCE-CPWGVPPEKITDANVAARAELLLDQYRKKSELFRTNVLLIPLGDD 423 (1129)
T ss_pred ecccccccCCCccCCCCceeeeeecccCCCCCcC-CCCCCCCeeechhhHHHHHHHHHHHHHHHhhhcccceEEEecCCc
Confidence 9999999999999999999999999999999974 999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcccccc
Q 002547 161 FRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYAD 240 (909)
Q Consensus 161 f~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDffpya~ 240 (909)
|||...+||+.||.||++||++||+++.++++++|||++|||+||+++.... . +....||+++||||+|||
T Consensus 424 FRy~~~~Ewd~Q~~NY~~LFD~iNs~~~~nv~aqFGTlsDYF~al~k~~~e~--------~-kg~~~FPtlSGDFFtYaD 494 (1129)
T KOG1958|consen 424 FRYDKITEWDQQFDNYQKLFDHINSRPLLNVQAQFGTLSDYFDALDKAYSER--------G-KGQEPFPTLSGDFFTYAD 494 (1129)
T ss_pred cccCccHHHHHHHHHHHHHHHHHhcccccceeeecCCHHHHHHHHHHhhccc--------c-CCCCCCcccccCceeeec
Confidence 9999999999999999999999999999999999999999999999874311 1 122459999999999999
Q ss_pred cCCCceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccc-cccCchhhHHHHHHHHHHhhhhccccCcCCCchh
Q 002547 241 RQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQ-CEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKD 319 (909)
Q Consensus 241 ~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~-~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTsk~ 319 (909)
+.++||||||||||++|++.|.+|++||+||+|+++|...+.... ...++...++.|++|||+|+++|||||||||||+
T Consensus 495 r~d~YWSGYyTSRPFyK~ldRvLeh~lR~AEIl~s~a~~~~~r~~~~~r~~~~~~~~L~~ARRnL~LFQHHDaITGTaK~ 574 (1129)
T KOG1958|consen 495 RDDHYWSGYYTSRPFYKRLDRVLEHYLRSAEILFSLALAHAHRVGLAQRIEESNYELLTAARRNLGLFQHHDAITGTAKD 574 (1129)
T ss_pred ccCccceeeeecchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHhhhhhhcccccccccch
Confidence 999999999999999999999999999999999998765432222 2245666778999999999999999999999999
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccc---cccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCCc
Q 002547 320 HVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRE---RYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLE 396 (909)
Q Consensus 320 ~V~~Dy~~rl~~~~~~~~~v~~~~~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~ 396 (909)
+|+.||..||..++..|+.++.+++..|++... +++.....+++++.+.+.+.+|.+.++.++. .+..||+||||+
T Consensus 575 ~Vv~DYg~rl~~Sl~~~~~v~~~~~~~Ll~~~~~~y~~~~~~~~~emd~~r~~~~~~pek~~~~~~~-~~~~vvlfN~l~ 653 (1129)
T KOG1958|consen 575 AVVVDYGQRLHESLVNLQIVLENALELLLGKDSETYNSDPSHSFIEMDDIRDSEDSLPEKTVIGLSS-GPRSVVLFNPLE 653 (1129)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCCceehhhcccCCCcCcccceeeccC-CCceEEEeccch
Confidence 999999999999999999999999999998653 2334456788999999999999988888754 458999999999
Q ss_pred cceeEEEEEEEcCCcEEEEcCCCeEeeeeeccccccCCcccc-cCcEEEEEEEeeCCCceEEEEEEeCccCcCcCcccee
Q 002547 397 QTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIF-TGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKL 475 (909)
Q Consensus 397 ~~r~~~V~v~V~~~~~~V~d~~G~~v~~Qi~~~~~~~~~~~~-~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~ 475 (909)
+.|.++|.|.|+++.|.|.+..|++|++||+|+|+...++.. .+.|+|.|.|.|||||..+|++..+...+....++
T Consensus 654 q~R~evv~i~V~sp~V~V~~d~g~pv~~Qispvw~~~~tk~~~~~~~~l~f~a~vpplgl~v~~~~~~~~~~~~~l~s-- 731 (1129)
T KOG1958|consen 654 QEREEVVTIRVNSPEVSVLDDGGVPVEAQISPVWQDTKTKTIKPGSYRLSFKATVPPLGLMVLRIDSGGLTEHAKLPS-- 731 (1129)
T ss_pred hhhhccEEEEecCCeeEEEcCCCceeeEeeccceeccccceeecceeEEEEEEecccceeeEEEeeccCccccccccc--
Confidence 999999999999999999999999999999999985444333 44899999999999999999998764332222221
Q ss_pred eecCCCCCCCCCCCccccCCC--ceeEEeeceEEEEEeccCceEEEEEc-cCCceEEEEEEEEEec----cCCCceeEEc
Q 002547 476 KYSSDNSFSCPTPYACSKIEG--DVADIRNRHQILSFDVRHGLLQKISH-INGSQNVVEEEIDMYS----SQGSGAYLFM 548 (909)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~--~~~~ieN~~~~l~fd~~~G~l~si~~-k~g~~~~v~~~f~~Y~----~~~sGAYiF~ 548 (909)
...++.++..++++.... +..+++|++.+|.||+++|+|+++.. .+++...+...|..|. ++.||||+|+
T Consensus 732 ---~~~~~~~~~~~s~~~~~~~~~~s~~~~~~~~l~fd~~~G~i~~~~~~~D~~~~~~q~~f~~y~~~~~~~~sgaylf~ 808 (1129)
T KOG1958|consen 732 ---KDTSFPAWDLGSSSTIGDSRELSTLRNEYFELRFDPETGTIKSINSLSDNKHFESQVSFSNYGERISGDESGAYLFL 808 (1129)
T ss_pred ---CCCCcccCCCccceeecCccccceeeccceeEEeccccchhhhhhhcccCCCcccceeeccccccccCCCCceEEEc
Confidence 122333444444433321 23489999999999999999999984 4677777888898886 3568999999
Q ss_pred cCCCCCCccc-CCceEEEEeCCceEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCCceEEEEE
Q 002547 549 PNGDAHPITE-AGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRY 627 (909)
Q Consensus 549 P~~~~~~~~~-~~~~~~v~~G~l~~ev~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iE~e~~Vd~~~~~~~~~el~~rf 627 (909)
|+|+++++.. ..+.+.+ +|+|+++|.+..++.+.... |.+|+|.|.. +|+++.||+.. ..|.|++|||
T Consensus 809 p~G~a~~~i~~~~p~v~v-~g~L~qev~~~~~~v~~~~~--~~~~~~~G~~------vei~~~vdi~~--~~n~Ela~R~ 877 (1129)
T KOG1958|consen 809 PDGNAKPIIELQWPHVRV-KGPLVQEVSQFLKNVLHRLS--QNVRGYSGEE------VEISNSVDIRK--EDNTELAMRF 877 (1129)
T ss_pred cCCCCCCceecCCCeEEe-ecceeeeeccccchHHHhch--hheeccCCcc------eeeeceeeccc--ccchhhhhhh
Confidence 9999998654 4456666 99999999998766554433 8999999974 99999999874 4799999999
Q ss_pred EEeeCCCCeEEEcCCCCcceecccCCCCCCccceeccCceEEEecCCCceeEEeeccccceeecCCCeEEEEEeecccCc
Q 002547 628 KTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWLEIMLDRRLSRD 707 (909)
Q Consensus 628 ~t~i~s~~~fytDsnG~~~i~R~~~~~~p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~lElml~Rr~~~D 707 (909)
.|+++++..||||+||+||+||.+..+.|+++|||||++++||+|.+ +||++++.+++|++||.+|+||||+|||+.+|
T Consensus 878 st~vds~~~FyTDlnG~Q~~kR~~~~KlPlQaNyYPmpt~a~Iq~~~-~RlsihS~q~lGvssL~sG~iEIm~DRrL~~D 956 (1129)
T KOG1958|consen 878 STDVDSGDLFYTDLNGMQMIKRRRLDKLPLQANYYPMPTAAFIQDAK-QRLSIHSAQSLGVSSLESGQIEIMLDRRLNQD 956 (1129)
T ss_pred hhcccCCceeeeccchhhhhhhhhcccCcccceeecccceeeeecCC-ceEEEEeecccCccccccceEEEEecccccCC
Confidence 99999999999999999999999999999999999999999999996 89999999999999999999999999999999
Q ss_pred CCCCCCcCcccCcceeEEEEEEEeeccCCCcccCCCCcccCchhhhhhhhccccCcceeeeccCCCCCcCCCCCCCcCCC
Q 002547 708 DGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISKKPQELSVQPPPRSFSPL 787 (909)
Q Consensus 708 D~rGvge~l~d~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~~l~~P~~~~~~~~~~~~~~~~~~~~~s~l 787 (909)
|+||||||+.||+++...|+|++|...+...+.....+.. ||+++|++++.|+||++.|+.+.+... .....|.++
T Consensus 957 D~rGLgqGv~DNk~t~~~frlv~e~~~s~~~p~e~~~~~~-ps~~ah~a~~~l~yP~~~f~~~~pk~i---~~~g~~~~~ 1032 (1129)
T KOG1958|consen 957 DGRGLGQGVIDNKPTDMKFRLVLESLNSAQDPTENSRVSY-PSLAAHLASQSLNYPLMKFIYAEPKKI---EDQGIFEPL 1032 (1129)
T ss_pred CCccccccccccchhhheeeeeecccccccCchhcCCCCC-hhhhhhcccceecCCchhhcccCCCCh---hhccccccc
Confidence 9999999999999999999999999876433333334444 999999999999999999885443221 124678889
Q ss_pred CCCCCCceEEEeeecCCCCCCCCCCCCccceEEEEEeeccccccccCCCCcccccccccccHhhhcccCccceEEEcccc
Q 002547 788 AGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPLNLFSMFKGLAILNAKATSLN 867 (909)
Q Consensus 788 ~~~LP~~vhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~ 867 (909)
..+||||+||+||+++.+.+ ....|+++||||.+.||+++.++. |. ..++++.+|+.+ +.+++.|+|+
T Consensus 1033 ~~~lpcDl~lvt~rtl~~~~-----~~~~~~~lil~R~~~~c~~~~~g~--c~---~~ki~~~~ll~~--~~~v~~tsLs 1100 (1129)
T KOG1958|consen 1033 NLSLPCDLHLVTFRTLESSK-----AAEKRAALILHRHATDCRSQKKGT--CG---QLKISVMDLLIK--AKSVKKTSLS 1100 (1129)
T ss_pred cCCCccceeEEEeeeccCcc-----cccccceeeeeecccccccccccc--cc---cccCcHHHHHHH--HHhhchhhHH
Confidence 99999999999999998755 245789999999999999977665 85 568999999998 8999999999
Q ss_pred CccccccccCCCCcccCCCCCCceEeccceeeEEEEEE
Q 002547 868 LLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYKLEM 905 (909)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~v~l~Pmeirtf~~~~ 905 (909)
+++....-. +.....++||||++|++.+
T Consensus 1101 ~l~~~~~~~----------~~~~~~~~pme~~~~l~~~ 1128 (1129)
T KOG1958|consen 1101 LLQEVGGII----------GVEEQELSPMEISAFLTSL 1128 (1129)
T ss_pred hhhhcccCC----------Ccccccccccccccccccc
Confidence 998754221 3345678999999998865
No 3
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-169 Score=1411.43 Aligned_cols=798 Identities=29% Similarity=0.464 Sum_probs=650.6
Q ss_pred ChhhhHHHhhcC--CCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceE
Q 002547 1 MEGNMWLNDTIG--FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIF 78 (909)
Q Consensus 1 ~~Gh~~l~~~fG--~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~ 78 (909)
|+|||||+++|| .+|++||||||||||++||+||++|||++++|+||||+||+.|..++.|||+||||.+++++++||
T Consensus 147 TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslfAqmGfd~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iF 226 (996)
T KOG1959|consen 147 TLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLFAQMGFDGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIF 226 (996)
T ss_pred HHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHHHHhCccchheeecchhhHHHHHhhccceEEeecCccccchhhhh
Confidence 689999999999 889999999999999999999999999999999999999999999999999999999999899999
Q ss_pred EeeCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEec
Q 002547 79 VHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLG 158 (909)
Q Consensus 79 th~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~G 158 (909)
||+|+. +| +|||+|| ||..+ ..-|..++| .+.++||++|++.|++..+.++..|||||||+|||
T Consensus 227 Tg~l~n-~Y------~~P~gfc--~dv~c------~d~Pi~D~~-~~~d~NVkerVd~Fv~~a~~~a~~~RtnHim~~MG 290 (996)
T KOG1959|consen 227 TGALYN-HY------SPPPGFC--FDVLC------GDDPIIDGP-RSYDYNVKERVDDFVAYAKNQAAYYRTNHIMWPMG 290 (996)
T ss_pred hhcccc-CC------CCCCCce--ecccc------CCCCCCCCC-CCCCccHHHHHHHHHHHHHHhHhheecceEEEecc
Confidence 999986 77 4678999 77532 122555554 47899999999999999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHhHHHHHHHHhcC--CCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcc
Q 002547 159 DDFRYTTINEAEAQFRNYQLLFDYINSN--PSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFF 236 (909)
Q Consensus 159 ~Df~y~~~~~a~~~~~n~~kli~~iN~~--~~~~~~i~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDff 236 (909)
|||+| ++|..||+||||||+|+|+. .+.++++.||||+||+++||+. +..||+++.|||
T Consensus 291 ~DFqY---~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~----------------~~Twp~Kt~DFF 351 (996)
T KOG1959|consen 291 DDFQY---ENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAA----------------NQTWPVKTDDFF 351 (996)
T ss_pred CCcee---hhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHh----------------cCcccccccccC
Confidence 99999 57999999999999999966 3458999999999999999984 368999999999
Q ss_pred cccccCCCceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCC
Q 002547 237 TYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGT 316 (909)
Q Consensus 237 pya~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGT 316 (909)
|||+++|.||||||||||.+||+.|.++++|++|++|.++|... .. .....|+.+|++|++.|||||||||
T Consensus 352 PYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~------~~---~~~~dl~~Lream~i~QHHDAVTGT 422 (996)
T KOG1959|consen 352 PYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLS------ST---EQGPDLDYLREAMAIMQHHDAVTGT 422 (996)
T ss_pred cCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCC------cc---ccCccHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999542 11 1124688899999999999999999
Q ss_pred chhhHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCCc
Q 002547 317 AKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLE 396 (909)
Q Consensus 317 sk~~V~~Dy~~rl~~~~~~~~~v~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~ 396 (909)
+|+||++||++||..|+..|+.+++.+++.|..... ..|+.|.. .+.+.||.+. ...+.+.|+|||||+
T Consensus 423 ekq~Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~~------~~f~~C~~-lNiS~C~~t~----~~~~~~~v~~YNpLa 491 (996)
T KOG1959|consen 423 EKQHVADDYARRLADGILGAEKLARDALRKLTNLPN------GEFQSCLL-LNISECAFTK----DGADNFIVTLYNPLA 491 (996)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC------ccchhhhh-hccccCCCCc----CCcCcEEEEEEcCCc
Confidence 999999999999999999999999999999987542 24655642 1233344321 234678999999999
Q ss_pred cceeEEEEEEEcCCcEEEEcCCCeEeeeeecccccc---CCcccccCcEEEEEEEeeCCCceEEEEEEeCccCcCcCccc
Q 002547 397 QTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRH---GKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPV 473 (909)
Q Consensus 397 ~~r~~~V~v~V~~~~~~V~d~~G~~v~~Qi~~~~~~---~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~ 473 (909)
|+++++|||||+.++++|+|+.|++|++|++|+... -.......+++|+|.|.|||+|+++|+|++..+.. ..
T Consensus 492 ~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~----~~ 567 (996)
T KOG1959|consen 492 HTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALESRNNDTKHELVFKASVPPLGIATYFIKKVASTE----RG 567 (996)
T ss_pred ceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhccccCCCceEEEEEEecCccceEEEEeecCccc----cc
Confidence 999999999999999999999999999999997532 12334567899999999999999999998654321 10
Q ss_pred eeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEE-ccCCceEEEEEEEEEecc-------CCCcee
Q 002547 474 KLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKIS-HINGSQNVVEEEIDMYSS-------QGSGAY 545 (909)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~fd~~~G~l~si~-~k~g~~~~v~~~f~~Y~~-------~~sGAY 545 (909)
..+. .+. ..+.......|+|+++++.||.++|+|++|. +.+|.+..|.|+|.+|.+ +.||||
T Consensus 568 ~~~~--~~~--------i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n~~q~SgAY 637 (996)
T KOG1959|consen 568 SASH--VRN--------IKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDNDKQASGAY 637 (996)
T ss_pred cccc--ccc--------cccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCcCCccCcce
Confidence 0000 000 0111223478999999999999899999987 446888999999999964 359999
Q ss_pred EEccCCCCCCcccCCceEEEEeCCceEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecC-CCCCceEE
Q 002547 546 LFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSH-NFNDRELI 624 (909)
Q Consensus 546 iF~P~~~~~~~~~~~~~~~v~~G~l~~ev~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iE~e~~Vd~~~~-~~~~~el~ 624 (909)
+|||...+.++.+....+.|+.|||+.||++.+ .+||+|++|||+|.+ ++|+||.|+|+|. +..+||+|
T Consensus 638 iFRp~~~~~~~~~~~vel~vv~G~LV~EVhQ~f-----~~wiSQviRvy~g~~-----~~E~Ew~VGpIp~~d~~gkEvV 707 (996)
T KOG1959|consen 638 IFRPGQADIPIVSDQVELTVVDGPLVKEVHQQF-----NPWISQVIRVYEGKN-----HVEFEWLVGPIPIDDGIGKEVV 707 (996)
T ss_pred EecCCCCCccccccceEEEEecCchHHHHHHHH-----HHHHhheeEecCCCc-----ceEEEEEecceecCCCccceEE
Confidence 999943445666666788999999999999875 358999999999998 8999999999996 56899999
Q ss_pred EEEEEeeCCCCeEEEcCCCCcceecc-----cCC---CCCCccceeccCceEEEecCCCceeEEeeccccceeecCCCeE
Q 002547 625 VRYKTDIDNKRIFYSDLNGFQMSRRE-----TYD---KIPLQGNYYPMPALAFMQGSNGQRFSVHSRQSLGVASLKDGWL 696 (909)
Q Consensus 625 ~rf~t~i~s~~~fytDsnG~~~i~R~-----~~~---~~p~~~nyYP~~s~~~i~D~~~~~ltvltd~~~G~ssl~~G~l 696 (909)
+||+|+|++++.|||||||+||+||. .|. ++|++||||||++.+||+|++ .||+||+||++|+||+.||+|
T Consensus 708 tr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~-~rl~vL~DRAqGgsSl~dG~l 786 (996)
T KOG1959|consen 708 TRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSK-KRLSVLNDRAQGGSSLKDGQL 786 (996)
T ss_pred EEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCC-ceEEEEeecccCCccccCCeE
Confidence 99999999999999999999999994 232 689999999999999999996 899999999999999999999
Q ss_pred EEEEeecccCcCCCCCCcCcccCcce----eE--EEEEEEeeccCCCcccCCCCcccCchhhhhhhhccccCcceeeecc
Q 002547 697 EIMLDRRLSRDDGRGLGQGVLDNRAM----NV--VFHILVESNISSTSNSISKPLTLSPSLLSHLTGAHLNYPLHAFISK 770 (909)
Q Consensus 697 Elml~Rr~~~DD~rGvge~l~d~~~~----~~--~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~~~~l~~P~~~~~~~ 770 (909)
|||||||++.||+|||||+|+|+... .. ++++++..... .+... .+.+.+++..|.+.|+++
T Consensus 787 ElMLHRRl~~DD~~Gv~EaLnEt~~~~~gL~~rGk~~~~l~~~~d--~a~~~----------~r~~~~ei~~P~~~~f~~ 854 (996)
T KOG1959|consen 787 ELMLHRRLLNDDGRGVGEALNETVYGHAGLIARGKLYVLLDKAGD--GATGW----------RRLAEQEIHLPLWKFFSK 854 (996)
T ss_pred EEEeeehhhcccccccchhcccccccccceEEeeeEEEEEecccc--cchhh----------hhhhhhhcccHHHHHhhc
Confidence 99999999999999999999997533 22 23334432221 11111 123457888999988887
Q ss_pred CCCCCcCC-CCC--CCcCCCCCCCCCceEEEeeecCCCCCCCCCCCCccceEEEEEeeccccccccCCCCcccccccccc
Q 002547 771 KPQELSVQ-PPP--RSFSPLAGSLPCDLHIVNFKVPRPSKYSQQSPDDSRFVLILQRRYWDSSYCRKGRSQCVSVVDEPL 847 (909)
Q Consensus 771 ~~~~~~~~-~~~--~~~s~l~~~LP~~vhLltl~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~~~~~~~~~~~~~~~~v 847 (909)
.....+.. ... ..|++ ...||.+||||||+.|++..+ .+|++|+++. |.|+.+ ....+|
T Consensus 855 ~~~~~~~~~~s~~~~~f~~-~~~lP~~vhLlTLe~~~~~~v------LlRleh~~e~-gED~~~----------s~vvsf 916 (996)
T KOG1959|consen 855 PEGGEALNSLSIPGSAFSG-SYDLPQSVHLLTLEEWSKDEV------LLRLEHLYEV-GEDSEL----------SQVVSF 916 (996)
T ss_pred CCCccchhhcCCCcccccc-ccCCCcceeeeecccCCCCce------Eeeehhhhhc-cccccc----------CcceEE
Confidence 55433221 112 23666 568999999999999987543 2555555532 444322 224579
Q ss_pred cHhhhcccCccceEEEccccCcccccccc--CCCCcc-c--------------CCC--CCCceEeccceeeEEEEEEeeC
Q 002547 848 NLFSMFKGLAILNAKATSLNLLNDDIGML--GYPEQL-E--------------DVS--QDGQVTIAPMEIQAYKLEMRPN 908 (909)
Q Consensus 848 ~l~~lf~~~~v~~~~e~sL~~~~~~~~~~--~~~~~~-~--------------~~~--~~~~v~l~Pmeirtf~~~~~~~ 908 (909)
+|++||..++|.+++||||+++....++. +|.|.. + +.. ....|+|.|||||||+|+++++
T Consensus 917 nl~~lf~~~~i~~i~EttL~gN~~ls~mkr~k~~~~~~G~~~~~~~~~~s~~~p~~~~~~~~vtL~PmeIRTfii~~~~~ 996 (996)
T KOG1959|consen 917 NLRKLFSALDIVEIRETTLDGNQPLSDMKRFKFHWDVSGEKPSGVEYSTSRHKPLDKTSEFIVTLHPMEIRTFIIKFQQK 996 (996)
T ss_pred EhHHhhcccCeeEEEEeeccCccChhhhhhhccccCCCCCCCCCccccccCCCCCCcccceEEEEeccEEEEEEEEEecC
Confidence 99999999999999999998887765544 444431 1 011 1236999999999999998763
No 4
>PRK09819 alpha-mannosidase; Provisional
Probab=100.00 E-value=6.9e-75 Score=715.96 Aligned_cols=558 Identities=18% Similarity=0.235 Sum_probs=436.5
Q ss_pred ChhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceEEe
Q 002547 1 MEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVH 80 (909)
Q Consensus 1 ~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~th 80 (909)
++||+|+ ++||..|++||+|||||||++|||||++|||++++|||+..+ +...+..+|+|+|+ |||+||||
T Consensus 105 l~G~~~~-~~fG~~~~vgwlpD~FG~s~~lPqIl~~~Gi~~~~~wr~~~~----~~~~~~~~F~W~g~----DGs~V~t~ 175 (875)
T PRK09819 105 LYGIRDC-REFGEPMKIGYLPDSFGQSGQMPQIYNGFGITRTLFWRGVSD----RHGTDKTEFLWQSD----DGSEVLAQ 175 (875)
T ss_pred HHHHHHH-HHcCCCCceeeecCCCCCcHHHHHHHHhCCCCeEEEEecccc----cccCCCceEEEECC----CCCeEEEE
Confidence 4799998 799999999999999999999999999999999999997542 11246789999998 68999999
Q ss_pred eCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCC
Q 002547 81 MMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDD 160 (909)
Q Consensus 81 ~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~G~D 160 (909)
++|. +|.. +. . .+.+.++++++++.+++.+++++ .++++|+|+|+|
T Consensus 176 ~~~~-~Y~~----g~------------------------~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~G~d 221 (875)
T PRK09819 176 QLPL-GYAI----GK------------------------Y--LPEDEEELKKRLDEYFGVLEKKS---STKNILLPNGHD 221 (875)
T ss_pred ECcc-cccc----CC------------------------C--CCcCHHHHHHHHHHHHHHHhhcC---CCCcEEEecCCC
Confidence 9995 5511 10 0 12355789999998888887775 799999999999
Q ss_pred CCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCccc-cc
Q 002547 161 FRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFT-YA 239 (909)
Q Consensus 161 f~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDffp-ya 239 (909)
+.+. .+||.++|+.+|.... .+++++||+++||+++++.. ..||+++|||+. +.
T Consensus 222 ~~p~--------~~~~~e~i~~~~~~~~-~~~~~~st~~~yf~~l~~~~----------------~~lp~~~GEl~~~~y 276 (875)
T PRK09819 222 QMPL--------QKNLFEVMDKLNEIYP-EREFVISRFENVFEKLEKQR----------------DNLPTLKGEFIDGKY 276 (875)
T ss_pred CCcc--------cccHHHHHHHHHhhCC-CCcEEECCHHHHHHHHHhhc----------------CCCCeeeeecCCCcc
Confidence 9774 2578888888887743 36889999999999998742 479999999984 22
Q ss_pred ccCCCceeEEecccchhhhHHHHHHHHHH-HHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCCch
Q 002547 240 DRQQDYWSGYYVSRPFFKAVDRVLEQTLR-ATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAK 318 (909)
Q Consensus 240 ~~~~~yWtGyyTSRp~~K~~~R~~e~~L~-~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTsk 318 (909)
..+++||||||+.+|++||++|.+|+ .+|+|+++|... |..|| .+.|++|||.|+++||||+||||++
T Consensus 277 ---~~~HrG~~TSr~~iK~~nr~~E~~L~~~~E~l~~la~~~-----g~~yp---~~~l~~~Wk~ll~nq~HD~i~G~si 345 (875)
T PRK09819 277 ---MRVHRSIFSTRMDIKIANARIENKIVNVLEPLASIAYSL-----GFEYP---HGLLEKIWKEMFKNHAHDSIGCCCS 345 (875)
T ss_pred ---ccccCCccccHHHHHHHHHHHHHHHHHHhchHHHHHHHc-----CCCCC---HHHHHHHHHHHHHhcCCCcccccCC
Confidence 23458999999999999999999997 499999998643 56677 4789999999999999999999999
Q ss_pred hhHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCCccc
Q 002547 319 DHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQT 398 (909)
Q Consensus 319 ~~V~~Dy~~rl~~~~~~~~~v~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~ 398 (909)
++|++||..|+.++.+.++.+++.+++.|+... ..++...++||||++|+
T Consensus 346 d~V~~d~~~r~~~~~~~~~~l~~~~l~~l~~~i------------------------------~~~~~~~~~vfN~l~~~ 395 (875)
T PRK09819 346 DTVHRDIVARYKLAEDLADNLLDFYMRKIADNM------------------------------PQSDADKLTVFNLLPYE 395 (875)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------CcCCCCEEEEEcCCCcc
Confidence 999999999999999999999999999887521 11234578999999999
Q ss_pred eeEEEEEEE--cCCcEEEEcCCCeEeeeeeccccccC-----------CcccccCcEEEEEEE-eeCCCceEEEEEEeCc
Q 002547 399 REEIVMVIV--NRPDITVLDSNWTCVQSQISPELRHG-----------KSKIFTGRHRLHWKA-TIPALGLQVYYIANGF 464 (909)
Q Consensus 399 r~~~V~v~V--~~~~~~V~d~~G~~v~~Qi~~~~~~~-----------~~~~~~~~~~l~f~a-~vPplG~~ty~i~~~~ 464 (909)
|+++|++++ ..+.+.|.|.+|++|++|+....... .......++.+.|.+ +||||||++|.+....
T Consensus 396 r~~~v~i~~~~~~~~~~~~d~~g~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~vP~lG~~~~~i~~~~ 475 (875)
T PRK09819 396 REEVINTTVYLPASQFTLRDDRGNPLPYTIREKRDIDPGLLDRQIVHYGNYDPFMEFDIQINVQILPAMGYRTLYIELNE 475 (875)
T ss_pred ceeEEEEEEEeccCCEEEECCCCCEeeEEEeeccccccchhhcceeccCCCCceEEEEEEEEECCCCCcccEEEEEEeCC
Confidence 999999876 45678999999999999997432110 000001256788885 8999999999987543
Q ss_pred cCcCcCccceeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEEcc-CCceEEEEEEEEEecc--CC
Q 002547 465 VGCDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISHI-NGSQNVVEEEIDMYSS--QG 541 (909)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~fd~~~G~l~si~~k-~g~~~~v~~~f~~Y~~--~~ 541 (909)
.. +... ........|||++|+|+||+ +|.|. |.+| +|++. .++..|.+ +.
T Consensus 476 ~~-----~~~~-----------------~~~~~~~~ieN~~~~v~i~~-~G~l~-l~dk~~gr~~---~~~~~~~d~~d~ 528 (875)
T PRK09819 476 EG-----NVIE-----------------PKSSAEGIIENEFYQITLNE-NGTLT-IVDKKSGKTY---DRQLIIEENGDD 528 (875)
T ss_pred cc-----cccc-----------------ccccccceEecCcEEEEEec-CCcEE-EEECCCCcEE---eceEEEEecCcC
Confidence 21 0000 01124568999999999995 89994 6654 56644 23445543 45
Q ss_pred CceeEEccCCCCCCcccC--CceEEEEeCCceEEEEEeeccc-------------ccCCceEEEEEEecCCCccceeEEE
Q 002547 542 SGAYLFMPNGDAHPITEA--GGLMVISKGPLMEEAYSYPRTA-------------WERSPISHSTRLYNGNNMIQEFLIE 606 (909)
Q Consensus 542 sGAYiF~P~~~~~~~~~~--~~~~~v~~G~l~~ev~~~~~~~-------------~~~~~i~q~irLy~~~~~~~~~~iE 606 (909)
+++|+|.|...+..+... ...+.+++|++++++++..... ...+.++|+++|+++++ +|+
T Consensus 529 gD~yd~~p~~~d~~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~p~~~~~r~~~~~~~~~~i~~~i~L~~~s~-----~i~ 603 (875)
T PRK09819 529 GDEYDYSPPREDWVITSAEAVPSVEISHSAWQSRAVIRYRLAVPKNLEERAAGQKTGRMPVKLVVTLSKNSR-----RID 603 (875)
T ss_pred CCCcccCCCCCCCEEeccCCcceEEEEEcCCeEEEEEEEEEeCCcChhhHhhccccceEEEEEEEEEecCCC-----EEE
Confidence 789999997655443332 2456788899999988765311 12457999999999998 899
Q ss_pred EEEEEeeecCCCCCceEEEEEEEeeCCCCeEEEcCCCCcceecccCCC--CCCc--------cceeccCceEEEecCCCc
Q 002547 607 KEYHVELLSHNFNDRELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDK--IPLQ--------GNYYPMPALAFMQGSNGQ 676 (909)
Q Consensus 607 ~e~~Vd~~~~~~~~~el~~rf~t~i~s~~~fytDsnG~~~i~R~~~~~--~p~~--------~nyYP~~s~~~i~D~~~~ 676 (909)
|+++|||.. .+|.+++.|+++|.+..++| | .+|++++|++..+ .+++ -+.||+.+++.|.|.+ .
T Consensus 604 ~~~~vdw~~---~~~~Lrv~fp~~i~~~~~~~-d-~~fG~i~Rp~~~~~~~~W~~~~~~e~p~~~~~~~~~v~ls~~~-~ 677 (875)
T PRK09819 604 FDVNLDNQA---DDHRLRVLFPTEIASKFSLA-D-QQFGSITRPVNDPAMDVWEQEGWQEAPISIEPMQSFVALHDER-H 677 (875)
T ss_pred EEEEEeccc---cceEEEEEccCCCCCCceEc-C-CCceEEECCCcCccccccccccceeCCCCChhhhceEEEecCC-c
Confidence 999999986 68999999999999998754 6 7889999987532 1111 1567999999999984 7
Q ss_pred eeEEeeccccceeecCC--CeEEEEEeeccc
Q 002547 677 RFSVHSRQSLGVASLKD--GWLEIMLDRRLS 705 (909)
Q Consensus 677 ~ltvltd~~~G~ssl~~--G~lElml~Rr~~ 705 (909)
+++|+||+.+|.....+ +.|.|+|.|+.-
T Consensus 678 Gvall~dg~~ey~v~g~~~~~i~LTLlRs~g 708 (875)
T PRK09819 678 GVAVFTEGVREYEIIGENYDTIALTLFRGVG 708 (875)
T ss_pred eEEEECCCcceEEEecCCCCeEEEEeecccC
Confidence 99999999999764433 389999999873
No 5
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-51 Score=447.54 Aligned_cols=529 Identities=19% Similarity=0.276 Sum_probs=392.6
Q ss_pred hhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceEEee
Q 002547 2 EGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHM 81 (909)
Q Consensus 2 ~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~th~ 81 (909)
.|+.|+.++||++.+.-|+||+||+|++||||++.+||+.|++|++.|+..+.++ +..|.|.|. |||+|+|||
T Consensus 382 ~GQ~FFlkeFG~~c~~FWLPDTFGYSsQ~PQicrlcGidrFLTQKLSWNniNSFP---hsTFnW~gl----DGSqvl~Hm 454 (1078)
T KOG4342|consen 382 QGQNFFLKEFGKMCSEFWLPDTFGYSSQLPQICRLCGIDRFLTQKLSWNNINSFP---HSTFNWEGL----DGSQVLVHM 454 (1078)
T ss_pred hhhhHHHHHhhhhhcceeccccccccchhhHHHHhhcHHHHHHhhccccccCcCC---ccceeeeec----cCceEEEec
Confidence 5999999999999999999999999999999999999999999999999877655 569999999 699999999
Q ss_pred CCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCe--EEEEecC
Q 002547 82 MPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNT--LLVPLGD 159 (909)
Q Consensus 82 ~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~--il~p~G~ 159 (909)
.|..+|... .||.+ +..-++|-+.+. +.++ +|+-+||
T Consensus 455 PPgntYtad-------------------------------------~~v~d-VL~tv~qnk~~~---~~~~gl~lfG~GD 493 (1078)
T KOG4342|consen 455 PPGNTYTAD-------------------------------------GSVED-VLKTVAQNKDKG---RANHGLFLFGFGD 493 (1078)
T ss_pred CCCCccccc-------------------------------------CcHHH-HHHHHHhcCCcc---ccCcceEEEEecC
Confidence 997677321 12333 222233333332 4454 4444555
Q ss_pred CCCCCChhhHHHHHHhHHHHH--HHHhcCCCCceEEEeC-CHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcc
Q 002547 160 DFRYTTINEAEAQFRNYQLLF--DYINSNPSLNAEAKFG-TLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFF 236 (909)
Q Consensus 160 Df~y~~~~~a~~~~~n~~kli--~~iN~~~~~~~~i~~s-T~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDff 236 (909)
+.... +-+.++||- +-|+....+-++++.| |+.+||+++.+... +...+|+|.||+|
T Consensus 494 GGGGP-------T~eML~klrR~r~~~Nt~G~lP~vqlg~tvdeffd~ilkrtn-------------qg~~LptW~GELy 553 (1078)
T KOG4342|consen 494 GGGGP-------TQEMLDKLRRIRSLSNTDGVLPRVQLGITVDEFFDAILKRTN-------------QGHDLPTWVGELY 553 (1078)
T ss_pred CCCCC-------cHHHHHHHHHhhcccccCCcccceeecCCHHHHHHHHHhhhc-------------cCCcccccchheE
Confidence 54443 335666653 3444443445788999 99999999987642 2457999999999
Q ss_pred cccccCCCceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCC
Q 002547 237 TYADRQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGT 316 (909)
Q Consensus 237 pya~~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGT 316 (909)
.++++|.|||++.+|+++|++|..|..+|.++++|...+ ....|| .+.|..+||.++++|+||.++|+
T Consensus 554 ------fEfHrGTYTtqAq~KKlmR~~Ei~LHD~E~~sslas~~s---~dy~YP---~~qlq~LWr~~LLcQFHDVlpGS 621 (1078)
T KOG4342|consen 554 ------FEFHRGTYTTQAQIKKLMRECEIILHDVELLSSLASARS---ADYLYP---AAQLQHLWRLLLLCQFHDVLPGS 621 (1078)
T ss_pred ------EEEecCceeeHHHHHHHHHHHHHHhhhHHHHHHHHHhhc---ccccCc---HHHHHHHHHHHHHHHhcccCCcH
Confidence 578899999999999999999999999999999986531 234567 47899999999999999999999
Q ss_pred chhhHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCCc
Q 002547 317 AKDHVVLDYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLE 396 (909)
Q Consensus 317 sk~~V~~Dy~~rl~~~~~~~~~v~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~ 396 (909)
+++-|++|..-.|.+.+..++.++..+++.|.... .+...+++.|+|+
T Consensus 622 CIeMVykeA~p~~~~v~k~~~tLl~~a~~~L~as~--------------------------------s~ke~L~~~nTLp 669 (1078)
T KOG4342|consen 622 CIEMVYKEAMPHYEDVRKHGNTLLSAAAAALCASE--------------------------------SGKEGLLIVNTLP 669 (1078)
T ss_pred HHHHHHHhhhhHHHHHHHhhHHHHHHHHHHHhcCC--------------------------------CCccceEEEeccc
Confidence 99999999999999999999999999999885311 1234588999999
Q ss_pred cceeEEEEEEEcCCcEEEEcCCCeEeeeeeccccccCCcccccCcEEEEEEEeeCCCceEEEEEEeCccCcCcCccceee
Q 002547 397 QTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLK 476 (909)
Q Consensus 397 ~~r~~~V~v~V~~~~~~V~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~ 476 (909)
|.|.+++.++-....+ ..-..++|.+|++...- .+.|.
T Consensus 670 W~~~~v~~~~kp~k~~-------------------------------~~e~c~~~g~~ta~vt~--------~~~p~--- 707 (1078)
T KOG4342|consen 670 WKRIEVMALPKPGKAH-------------------------------SLELCTVPGMGTAPVTP--------PTSPV--- 707 (1078)
T ss_pred cceeeeecccCCCCce-------------------------------eEEEeccCCccccCCCC--------CCCce---
Confidence 9999988765332111 11135678887663210 00111
Q ss_pred ecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEEcc-CCceE--------EE-EEEEEEeccCC--Cce
Q 002547 477 YSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISHI-NGSQN--------VV-EEEIDMYSSQG--SGA 544 (909)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~fd~~~G~l~si~~k-~g~~~--------~v-~~~f~~Y~~~~--sGA 544 (909)
|.. ...+.++|.|+.++|++++ +|.|+|+.+. .|++. .+ .++|+.|++.+ ..|
T Consensus 708 ------------~~y--q~Dd~~~L~Ng~lrV~i~p-~G~itSl~d~~~grE~ld~~~Grn~~GaNQfVlfdD~PL~WqA 772 (1078)
T KOG4342|consen 708 ------------FVY--QTDDSVTLDNGILRVKIDP-TGRITSLVDVASGREALDTAEGRNAVGANQFVLFDDVPLYWQA 772 (1078)
T ss_pred ------------eEE--ecCCeEEEECCEEEEEECC-CCceeeeeehhcccchhcccccccccCcccEEEecCCccchhh
Confidence 111 1235688999999999997 8999999853 23221 12 26788887643 345
Q ss_pred eE---EccCCCCCCcccCCceEE-EEeCCceEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCC
Q 002547 545 YL---FMPNGDAHPITEAGGLMV-ISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFND 620 (909)
Q Consensus 545 Yi---F~P~~~~~~~~~~~~~~~-v~~G~l~~ev~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iE~e~~Vd~~~~~~~~ 620 (909)
|+ |.-. ..++......+. -.+|+++..|.+..+.. ..+.+.++|.|-.+.....=..|.|.++|+|.+ .+
T Consensus 773 WDte~ysle--~y~vl~k~k~v~v~~~g~lr~sv~v~~qIS-e~s~~k~~isL~~~~~~ak~~~V~f~teV~Whe---~~ 846 (1078)
T KOG4342|consen 773 WDTEDYSLE--RYPVLGKAKTVAVGTEGGLRGSVWVLLQIS-ENSRLKQEISLDVGCTDAKLPYVRFHTEVHWHE---AH 846 (1078)
T ss_pred hhhhhhcee--cceecCCCceEEeecCCCcceEEEEEEEcC-cccccceEEEEecccccccCCceeeEEEEeehh---cC
Confidence 43 3221 234444444443 45899998887654311 356788999986665211112699999999986 68
Q ss_pred ceEEEEEEEeeCCCCeEEEcCCCCcceecccCCCCCCccceeccCceEE--EecCCCceeEEeeccccceeecCCCeEEE
Q 002547 621 RELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAF--MQGSNGQRFSVHSRQSLGVASLKDGWLEI 698 (909)
Q Consensus 621 ~el~~rf~t~i~s~~~fytDsnG~~~i~R~~~~~~p~~~nyYP~~s~~~--i~D~~~~~ltvltd~~~G~ssl~~G~lEl 698 (909)
|-+.+.|+.+|.|..+-|.. .|++.+|+|+-+..+....|.|+..-| ..|- +.+++|||||+||. |....-|.|
T Consensus 847 KFLKVEFPv~irs~fAsYEt--QFGitkRPTHYNTSWDvAkFEVchhkfaDySe~-~~Gvs~LNDCKYGf-SthGnlmrL 922 (1078)
T KOG4342|consen 847 KFLKVEFPVRIRSSFASYET--QFGITKRPTHYNTSWDVAKFEVCHHKFADYSEH-GFGVSLLNDCKYGF-STHGNLMRL 922 (1078)
T ss_pred ceEEeeccccccccchhhhh--hcccccCCccccccchhhHhHHHHhhhhhhhhc-ccceeeeccccccc-ccccceeee
Confidence 99999999999999888875 566999999888888888899987554 4554 58999999999995 689999999
Q ss_pred EEeecccCcCC
Q 002547 699 MLDRRLSRDDG 709 (909)
Q Consensus 699 ml~Rr~~~DD~ 709 (909)
.|.|.+...|.
T Consensus 923 SLLRsPKaPDA 933 (1078)
T KOG4342|consen 923 SLLRSPKAPDA 933 (1078)
T ss_pred hhhcCCCCCCc
Confidence 99999998884
No 6
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). This domain is found at the C terminus of glycosyl hydrolases from family 38.; GO: 0015923 mannosidase activity, 0006013 mannose metabolic process; PDB: 2WYI_A 2WYH_A 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=100.00 E-value=2.1e-44 Score=420.50 Aligned_cols=421 Identities=30% Similarity=0.441 Sum_probs=278.2
Q ss_pred eEEEEEcCCccceeEEEEEEEcCCcEEEEcCCCeEeeeeeccccccCCcccccCcEEEEEEEeeCCCceEEEEEEeCccC
Q 002547 387 QSVVIFNPLEQTREEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVG 466 (909)
Q Consensus 387 ~~vvvfNpL~~~r~~~V~v~V~~~~~~V~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~ 466 (909)
++|+|||||+|+|+++|+|+|..+.+.|.|..|++|++|++|. ......++|.|.++||||||++|.|......
T Consensus 1 ~~vvvfN~l~~~r~~vv~i~v~~~~~~~~~~~g~~v~~qi~~~------~~~~~~~~l~f~~~vPalGy~~~~i~~~~~~ 74 (457)
T PF07748_consen 1 FPVVVFNPLPWPRSEVVEIPVNTPNVSVYDADGKPVPSQIIPE------PYSTGRYELLFVVDVPALGYKTYRIVEGESS 74 (457)
T ss_dssp EEEEEEE-SSS-EEEEEEEEEEECEEEEECSTSHEEHCEEEEE------EEEEEEEEEEEEEEE-TTEEEEEEEEECSS-
T ss_pred CEEEEEECCCCcEEEEEEEEeccCceEEEecCCcEeeEEEEec------cCCCCceEEEEEeccCCceeEEEEeeccccc
Confidence 5799999999999999999999999999999999999999982 2235678999999999999999999987543
Q ss_pred cCcCccceeeecCCCCCCCCCCCccccCCCceeEEeeceEEEEEeccCceEEEEEc-cCCceEE--EEEEEEEeccC---
Q 002547 467 CDKAKPVKLKYSSDNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHGLLQKISH-INGSQNV--VEEEIDMYSSQ--- 540 (909)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~fd~~~G~l~si~~-k~g~~~~--v~~~f~~Y~~~--- 540 (909)
....... . ....++..|||++|+|+||+.+|.|.+|++ ++|++.. ..+++..|.+.
T Consensus 75 ~~~~~~~-~-----------------~~~~~~~~leN~~~~v~~~~~tG~i~sl~dk~~g~~~~~~~~~~~~~y~~~~~~ 136 (457)
T PF07748_consen 75 EPSNEAS-I-----------------AKDSGDNVLENEFYKVTFDPNTGGIKSLYDKKTGREYVDQDGNDFYIYEDIDGD 136 (457)
T ss_dssp -TTC--C-E-----------------EETT-TTEEETSSEEEEE-TTTSSEEEEEETTTS-EEEEEECEEEEEEEBTTSC
T ss_pred cccccce-e-----------------ecceeeEEEEccEEEEEEeCCCCeEEEEEEccCCeEEEeecCCceeEecccccc
Confidence 1100000 0 001134789999999999986699999975 5677776 67788888531
Q ss_pred ---------CCceeEEccCCCCCCcccCCceEEEEeCCceEEEEEeecc-------------cccCCceEEEEEEecCCC
Q 002547 541 ---------GSGAYLFMPNGDAHPITEAGGLMVISKGPLMEEAYSYPRT-------------AWERSPISHSTRLYNGNN 598 (909)
Q Consensus 541 ---------~sGAYiF~P~~~~~~~~~~~~~~~v~~G~l~~ev~~~~~~-------------~~~~~~i~q~irLy~~~~ 598 (909)
.+|+|+|+| +||+...+.+.+.. ....+.++++++||++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~-----------------~g~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~i~~~i~L~~~~~ 199 (457)
T PF07748_consen 137 YDISPLELQRSGAYLFVE-----------------DGPLRSSIRVEYKFELPKNLSLVKRSEQTGSSRITQTIRLYKGSP 199 (457)
T ss_dssp TTE-SCCCGSEECCEEEE-----------------ESSSEEEEEEEEEEEEESCBECEEEESCEEEEEEEEEEEEETTES
T ss_pred ccccccccccCceEEEEe-----------------cCCceEEEEEEEEEeccCCcEEEEEEEeccceEEEEEEEEecCce
Confidence 234555544 45555544433221 012357999999999997
Q ss_pred ccceeEEEEEEEEeeecCCCCCc-eEEEEEEEeeCCCCeEEEcCCCCcceecccCCCCCCccceeccCceEEEecCCCce
Q 002547 599 MIQEFLIEKEYHVELLSHNFNDR-ELIVRYKTDIDNKRIFYSDLNGFQMSRRETYDKIPLQGNYYPMPALAFMQGSNGQR 677 (909)
Q Consensus 599 ~~~~~~iE~e~~Vd~~~~~~~~~-el~~rf~t~i~s~~~fytDsnG~~~i~R~~~~~~p~~~nyYP~~s~~~i~D~~~~~ 677 (909)
+|||+++||+... .++ +++++|+|+|.++..||+|++|+++.+|+++.+.|+++|||||++.+||.|++ .+
T Consensus 200 -----~ie~~~~vdn~~~--~~~~~l~~~f~t~i~~~~~~~~~~fG~~~r~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~ 271 (457)
T PF07748_consen 200 -----RIEFETEVDNWAE--DHRKELRVRFPTNIDSDEAFYDDQFGFIERKRPTHPNTPWEANYYPVPSHAFVDDSD-SR 271 (457)
T ss_dssp -----SEEEEEEEEE-TT--SCEEEEEEEEEES-S-TCEEEEESTTEEEEECESSTTTTCGGG-EEECSCCEEEECS-EC
T ss_pred -----EEEEEEEeccccc--CCceeEEEEeecCCCCCCEEEECCCCeEEecCCccccCCcccccCCCcceEEEEcCC-CC
Confidence 7999999994332 233 79999999999999999999986655557777899999999999999999985 57
Q ss_pred eEEeeccccceeecC-CCeEEEEEeecccCcCCCCCCcCcccCcceeEEEEEEEeeccCCCcccCCCCcccCchhhhhhh
Q 002547 678 FSVHSRQSLGVASLK-DGWLEIMLDRRLSRDDGRGLGQGVLDNRAMNVVFHILVESNISSTSNSISKPLTLSPSLLSHLT 756 (909)
Q Consensus 678 ltvltd~~~G~ssl~-~G~lElml~Rr~~~DD~rGvge~l~d~~~~~~~~~l~~e~~~~~~~~~~~~~~~~~~sl~~~~~ 756 (909)
|+|+||+++|++++. +|+|||||||++..||+||++ .|+|++......... . ...
T Consensus 272 l~i~~d~~~g~~~~~~~g~l~ltL~R~~~~D~g~~~~-----------~~~l~~~~~~~~~~~-~------------~~~ 327 (457)
T PF07748_consen 272 LAILNDGKYGYESLDQDGELELTLLRRPSQDDGRGVF-----------RYALYPHSGSWDEAD-V------------VQE 327 (457)
T ss_dssp EEEEESS-EEEEECTTTTEEEEEEEEEBSCG-SSSEE-----------CCEEEEEEEEEEEEE-C------------HHC
T ss_pred EEEEcCCCcceEeccCCCeEEEEEeecccccCCccEE-----------EEEEEEecccccccc-c------------hhh
Confidence 999999999999887 999999999999999999988 455655443220000 0 111
Q ss_pred hccccCcceeeeccCCCCCcCCCCCCCcCCCC---CCCCCceEEEee--ecCCCCCCCCCCCCccceEEEEEeecccccc
Q 002547 757 GAHLNYPLHAFISKKPQELSVQPPPRSFSPLA---GSLPCDLHIVNF--KVPRPSKYSQQSPDDSRFVLILQRRYWDSSY 831 (909)
Q Consensus 757 ~~~l~~P~~~~~~~~~~~~~~~~~~~~~s~l~---~~LP~~vhLltl--~~~~~~~~~~~~~~~~r~~~ll~~~~~d~~~ 831 (909)
+..+++|+..|..... .......++++. ..+|+++|+.+| ..+.+..... ...-++|||+.+..+.-
T Consensus 328 a~~l~~Pl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sa~K~aed~~----~~~~~~ilR~~n~~~~~ 399 (457)
T PF07748_consen 328 AYELNQPLIVFNSSNI----QARQLNSFSGLSLPPEESPLNIHLLNLVVSALKKAEDGS----DWSDGLILRLYNPSGKE 399 (457)
T ss_dssp HHHHTS-EEEESS--T----TBEE--CE-TCS--SSEESTCECEEEEEEEEEEECTTTS----EEETCEEEEEEESSSST
T ss_pred hhhccCccEEeecccc----ccccccCCCcccccccccccccCCCcccccccccccccc----cccCCEEEEEEecCCCc
Confidence 2368899987721111 001123344443 348999999998 2222111000 00124788887765543
Q ss_pred ccCCC-CcccccccccccHhhhcccCccceEEEccccCccccccccCCCCcccCCCCCCceEeccceeeEEE
Q 002547 832 CRKGR-SQCVSVVDEPLNLFSMFKGLAILNAKATSLNLLNDDIGMLGYPEQLEDVSQDGQVTIAPMEIQAYK 902 (909)
Q Consensus 832 ~~~~~-~~~~~~~~~~v~l~~lf~~~~v~~~~e~sL~~~~~~~~~~~~~~~~~~~~~~~~v~l~Pmeirtf~ 902 (909)
..... ..|.......+.+.+||....+.+++|+++..... .....|+|+|||||||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~lle~~~~~~i~e~s~~~~~~--------------~~~~~~~l~P~EIkT~r 457 (457)
T PF07748_consen 400 TEASLDFLSKPLSGAEVNLVNLLEEPDIEEIEETSLSDPSE--------------SNSVELTLKPFEIKTFR 457 (457)
T ss_dssp CCCTTCCTSCCTEEEEEEEESTTSSSCEEEEEEE-SEEEES--------------CGGTCSEE-TTEEEEEE
T ss_pred cccccccCCccceeEEEEecccccCCCccceEeeccCCCCC--------------CCEeEEEEeCcEEEEEC
Confidence 22111 11111112456778999988889999999432111 12347899999999996
No 7
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-31 Score=326.47 Aligned_cols=486 Identities=17% Similarity=0.211 Sum_probs=336.6
Q ss_pred hhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceEEee
Q 002547 2 EGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVHM 81 (909)
Q Consensus 2 ~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~th~ 81 (909)
+|+||+.+.||...|+.|.||+||.|+++|||+..+|++.|+++++.|++.+.++.+ .|.|++. +|+++++|+
T Consensus 297 ~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~tn~~Ph~---~~~w~~~----dg~e~~~hd 369 (943)
T COG0383 297 YGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWNDTNRFPHD---LLRWRWK----DGTENLAHD 369 (943)
T ss_pred ccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhhccCCChh---Hheeecc----cccccceee
Confidence 599999999999999999999999999999999999999999999999999988874 7999988 689999998
Q ss_pred CCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecC-C
Q 002547 82 MPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGD-D 160 (909)
Q Consensus 82 ~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~G~-D 160 (909)
.+. + || .| ..+. . .+++... .....|+.+|. |
T Consensus 370 s~~---------~-----~~-~d----------------------~v~~-----~--~~~r~~~---~~~~~~~~~g~gd 402 (943)
T COG0383 370 SIC---------G-----CS-SD----------------------PVHR-----E--MEYRFEK---INQVGLYLYGYGD 402 (943)
T ss_pred cCC---------C-----Cc-cc----------------------HHHH-----H--HHhhhhh---hccceeEEeeccC
Confidence 762 1 10 11 1111 1 1222222 34556666663 4
Q ss_pred CCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccCCcccccc
Q 002547 161 FRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSGDFFTYAD 240 (909)
Q Consensus 161 f~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~gDffpya~ 240 (909)
+... +. .+.+++ .. ...+..+|.....+... .....|++.|++|
T Consensus 403 ~ggg---~~---~dm~~~---~~-----------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ely---- 446 (943)
T COG0383 403 GGGG---PS---IDMLEN---PE-----------LPIAEGVFNTGVEKKTS------------TLELVPTWDGELY---- 446 (943)
T ss_pred CCCC---CC---HHHHhc---cc-----------cccccceeeecceeeee------------ecccccccchhhh----
Confidence 4442 11 111111 10 12223333332221100 1245789999998
Q ss_pred cCCCceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCCchhh
Q 002547 241 RQQDYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDH 320 (909)
Q Consensus 241 ~~~~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTsk~~ 320 (909)
.++++|.|||....|.++|..|..|+.+|.+.+.+.... ..+..|+ .+.+.++|+.+.++|+||.++||+...
T Consensus 447 --~E~hrg~~t~~~~~k~~~r~~e~~l~d~e~~~~~~~~~~--~~~~~~~---~~~~~~~w~~~l~~qfhdvlpgs~i~~ 519 (943)
T COG0383 447 --LELHRGTYTTQAKTKKLNRESEFLLEDAEGISVEAAIIE--GDRVTYP---YELLNELWKGLLLAQFHDVLPGSSIKE 519 (943)
T ss_pred --hhccCceeehhhhhhhhccccccceecccccchhhhhhc--cccccCc---hhhHHHHHHHhhhhhceeeccccceee
Confidence 567889999999999999999999999999999864321 0124455 578999999999999999999999999
Q ss_pred HHH-hHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccccccccCCCCcceEeeecCCceeEEEEEcCCccce
Q 002547 321 VVL-DYGTRMHTSLQDLQIFMSKAIEVLLGIRERYDQNLSQFEPEQVRSKYDAQPVHKVINVHEGTSQSVVIFNPLEQTR 399 (909)
Q Consensus 321 V~~-Dy~~rl~~~~~~~~~v~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvvfNpL~~~r 399 (909)
|+. |....+......+..++..+++.|.+. ....+.++|++.|.+
T Consensus 520 vy~~~a~~~~~~~~~~~~~i~~~~~~~l~~~----------------------------------~~e~~~~~~~~~~~~ 565 (943)
T COG0383 520 VYSYDALPLLEVVQKGASKIAELALKVLSSQ----------------------------------CLENLFVKNTLSWNG 565 (943)
T ss_pred echhhHHHHHHhhhccchhhhhhhhhhhhhc----------------------------------cccceEEEeeccCCc
Confidence 999 888888888888888888877766221 123578999999998
Q ss_pred eEEEEEEEcCCcEEEEcCCCeEeeeeeccccccCCcccccCcEEEEEEEeeCCCceEEEEEEeCccCcCcCccceeeecC
Q 002547 400 EEIVMVIVNRPDITVLDSNWTCVQSQISPELRHGKSKIFTGRHRLHWKATIPALGLQVYYIANGFVGCDKAKPVKLKYSS 479 (909)
Q Consensus 400 ~~~V~v~V~~~~~~V~d~~G~~v~~Qi~~~~~~~~~~~~~~~~~l~f~a~vPplG~~ty~i~~~~~~~~~~~~~~~~~~~ 479 (909)
. .++|.|..+..++.+... ...++|++|...++++.... .+
T Consensus 566 ~----------~~~v~d~~~~~~~~~~~~-----------------~~ed~~~~g~~~i~~~~~~~-----~~------- 606 (943)
T COG0383 566 I----------SLQVLDKTSGGIYTSQLT-----------------ALEDVGDIGNEYIYSQPTKT-----EP------- 606 (943)
T ss_pred c----------eEEEEEcCCCceehhhhh-----------------hhhhcCCcccceeEeccccc-----cc-------
Confidence 1 456677666555544321 12368999999888732211 00
Q ss_pred CCCCCCCCCCccccCCCceeEEeeceEEEEEeccCc-eEEEEEccCCceEEEEEEEEEeccCCCceeEEccCCCC--CCc
Q 002547 480 DNSFSCPTPYACSKIEGDVADIRNRHQILSFDVRHG-LLQKISHINGSQNVVEEEIDMYSSQGSGAYLFMPNGDA--HPI 556 (909)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~fd~~~G-~l~si~~k~g~~~~v~~~f~~Y~~~~sGAYiF~P~~~~--~~~ 556 (909)
.....+++..++.++ ++| .+..+.++ -.+ ..||.-.+.-.. ..+
T Consensus 607 -----------------~~~~~~~~~~~~~~~-~~gn~~~~~~~~----------~~~-----~~~w~i~~~~~~~~~~~ 653 (943)
T COG0383 607 -----------------ETVIEEKEWKRLIIN-DTGNQLALIEDE----------PAY-----WDAWNIDKFLEEELLAL 653 (943)
T ss_pred -----------------cccccccchheeecc-CCCcceeeeecc----------cce-----echhcchhhhhhhhhhh
Confidence 011223334444444 466 33322211 011 122222221111 111
Q ss_pred ccCCceEEEEeCCceEEEEEeecccccCCceEEEEEEecCCCccceeEEEEEEEEeeecCCCCCceEEEEEEEeeCCCCe
Q 002547 557 TEAGGLMVISKGPLMEEAYSYPRTAWERSPISHSTRLYNGNNMIQEFLIEKEYHVELLSHNFNDRELIVRYKTDIDNKRI 636 (909)
Q Consensus 557 ~~~~~~~~v~~G~l~~ev~~~~~~~~~~~~i~q~irLy~~~~~~~~~~iE~e~~Vd~~~~~~~~~el~~rf~t~i~s~~~ 636 (909)
.... ...++.|||+.++++..+ ...+.++|.|++|++++ .|+|+++|||.. .+|.+++.|+++++++..
T Consensus 654 ~~~~-~~~~~~~~~~~~~~~~~~--~~~~~i~~~i~l~~~s~-----~l~~~t~vd~q~---~~~~lrv~fp~~~~s~~a 722 (943)
T COG0383 654 TALP-EEAIENGPLVRTVRVSKE--LTESTITQKVTLYKGSP-----RLDFKTEVDNQV---RDHRLRVLFPTDIASDFA 722 (943)
T ss_pred hccc-cchhccccceeeeeeeee--ccceEEEEEEEEecCCc-----eeEEEEEEEccc---cceEEEEEecccccccce
Confidence 1112 335789999999998754 44667999999999998 899999999876 699999999999999875
Q ss_pred EEEcCCCCcceecccCCCCCCccceec--cCceEEEecCCCce--eEEeeccccceeecCCCeEEEEEeeccc
Q 002547 637 FYSDLNGFQMSRRETYDKIPLQGNYYP--MPALAFMQGSNGQR--FSVHSRQSLGVASLKDGWLEIMLDRRLS 705 (909)
Q Consensus 637 fytDsnG~~~i~R~~~~~~p~~~nyYP--~~s~~~i~D~~~~~--ltvltd~~~G~ssl~~G~lElml~Rr~~ 705 (909)
. .| -.|+.++|+++.+..++.+.+| +..++.+.|.. .+ +++++|++||++ ..++.|.|.|.|...
T Consensus 723 ~-~d-~~fg~v~Rp~~~~~~W~~a~~e~p~~~~vdls~~~-~g~~vs~ln~~kYg~~-~~~~~l~lTLLrs~~ 791 (943)
T COG0383 723 T-AD-IPFGVVERPTHPNTSWENARFEVPLQKFVDLSDGE-YGVTVSLLGDCKYGIS-THGNLLALTLLRSVG 791 (943)
T ss_pred e-cc-ccceeeccCCCCchhhhcccCcchhhccccccCCc-cceeEeccCCcceeEe-ccCCEEEEEeccccc
Confidence 3 35 7899999999877666555555 45566677764 55 999999999975 699999999999873
No 8
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 38 GH38 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.24 from EC) (3.2.1.114 from EC). Lysosomal alpha-mannosidase is necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover. The enzyme catalyses the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides, and can cleave all known types of alpha-mannosidic linkages. Defects in the gene cause lysosomal alpha-mannosidosis (AM), a lysosomal storage disease characterised by the accumulation of unbranched oligo-saccharide chains.; GO: 0004559 alpha-mannosidase activity, 0005975 carbohydrate metabolic process; PDB: 2WYI_A 2WYH_A 1O7D_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A ....
Probab=99.97 E-value=1.2e-30 Score=283.43 Aligned_cols=173 Identities=33% Similarity=0.613 Sum_probs=130.9
Q ss_pred ChhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHHhhcCceEEEEeeCCCCCCCCceEEe
Q 002547 1 MEGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKELALHQNLEYIWRQSWDTEETSDIFVH 80 (909)
Q Consensus 1 ~~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~~~~~~~eF~Wr~~~~~~~~s~i~th 80 (909)
++||+|++++||+.|++||+||+||||+++|+||+++||++++++|++++++..++..+.++|+|+|+ +|++||||
T Consensus 100 ~~G~~~~~~~fg~~~~~~~~~D~FG~~~~lP~il~~~Gi~~~v~~r~~~~~~~~~~~~~~~~F~W~g~----dGs~ilt~ 175 (275)
T PF01074_consen 100 LYGHKYLRKEFGVRPKVAWQPDSFGHSAQLPQILKQFGIKYFVIWRISWNDKNPFKANPQSEFYWQGP----DGSEILTH 175 (275)
T ss_dssp HHHHHHHHHHHTG--SEEEESSSSSB-TCHHHHHHTTT-SEEEESSS-HHHHHHHHHTTSSEEEEE-T----TSTEEEEE
T ss_pred hhhHHHHHHhcCCCCCeEEeCCCCCCchhhHHHHhccCcceEEEeccccccccccccCCCceEEEecC----CCcceeEE
Confidence 37999999999999999999999999999999999999999999999999999998889999999999 57999999
Q ss_pred eCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEecCC
Q 002547 81 MMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPLGDD 160 (909)
Q Consensus 81 ~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~G~D 160 (909)
++|.+.|+ +..|++| +++..+++++++.+..+.++++|+|+|+|
T Consensus 176 ~~~~~y~~--------~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~G~d 219 (275)
T PF01074_consen 176 VLPNYYYG--------PWYGSEF----------------------------EDADELLEQLRKLAKKYYTNNILIPYGDD 219 (275)
T ss_dssp E-TST-TS--------HHTTCCH----------------------------HHHHHHHHHHHHHHCCSSSSEEEEEEEEE
T ss_pred ecccCCCC--------CCCCccc----------------------------ccHHHHHHHHHHHHHhcCCCceEEEeecC
Confidence 99964331 2233221 35677888999999999999999999998
Q ss_pred CCCCChhhHHHHHHhHHHHHHHHhcC--CCCceEEEeCCHHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcc-cCCccc
Q 002547 161 FRYTTINEAEAQFRNYQLLFDYINSN--PSLNAEAKFGTLDDYFRTLREEADRINYSRPGEIGSGQVEGFPSL-SGDFFT 237 (909)
Q Consensus 161 f~y~~~~~a~~~~~n~~kli~~iN~~--~~~~~~i~~sT~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~-~gDffp 237 (909)
+.++.++++++++||.. ....++++|||+++||++|+++ ..+|++ +|||||
T Consensus 220 ---------~~~~~~~~~~~~~i~~~~~~~~~~~i~~sT~~~yf~~l~~~-----------------~~~p~~~~~df~~ 273 (275)
T PF01074_consen 220 ---------DDGGPPDEELIEYINEWNEEYPGPKIKYSTLSEYFEALEKE-----------------SELPVHYHGDFPP 273 (275)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHGCTEEEEE--HHHHHHHHHHC-------------------B-EE-ES-B-S
T ss_pred ---------CCCCCcHHHHHHHHHHhcccCCCeEEEECCHHHHHHHHHhc-----------------cCCCcccCCCCCC
Confidence 12345666666666622 1236899999999999999874 368999 999999
Q ss_pred cc
Q 002547 238 YA 239 (909)
Q Consensus 238 ya 239 (909)
|+
T Consensus 274 Y~ 275 (275)
T PF01074_consen 274 YA 275 (275)
T ss_dssp -E
T ss_pred CC
Confidence 96
No 9
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=99.88 E-value=3.1e-23 Score=180.10 Aligned_cols=80 Identities=41% Similarity=0.603 Sum_probs=67.6
Q ss_pred CceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCCchhhHHH
Q 002547 244 DYWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVL 323 (909)
Q Consensus 244 ~yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTsk~~V~~ 323 (909)
+||+|||||||.+|+++|.+|++|++||+|++++.... .+..++ ...|+++|+.|+++||||+||||++++|++
T Consensus 1 e~~~G~~tSr~~~K~~~r~~e~~L~~~E~l~~~~~~~~---~~~~~~---~~~l~~~w~~l~~~q~HD~i~GT~~~~V~~ 74 (80)
T PF09261_consen 1 EYWTGYYTSRPDIKQLNRRAENLLRAAEPLAALAALLG---NGGDYP---QEELEKAWKALLLNQFHDAITGTSIDSVYD 74 (80)
T ss_dssp EES-GGGCSTHHHHHHHHHHHHHHHCHHHHHHHCHHH-----HSG-H---HHHHHHHHHHHHCTTBTTTTTS-S-HHHHH
T ss_pred CCcceeeeCHHHHHHHHHHHHHHHHHHHHHHHHHhHhc---cCcccc---HHHHHHHHHHHHHhccCCCCCCcChHHHHH
Confidence 58999999999999999999999999999999986541 122444 578999999999999999999999999999
Q ss_pred hHHHHH
Q 002547 324 DYGTRM 329 (909)
Q Consensus 324 Dy~~rl 329 (909)
||.+||
T Consensus 75 d~~~rl 80 (80)
T PF09261_consen 75 DYLRRL 80 (80)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999986
No 10
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain. Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase PUBMED:12634058.
Probab=99.85 E-value=1.7e-21 Score=168.79 Aligned_cols=79 Identities=42% Similarity=0.571 Sum_probs=70.5
Q ss_pred ceeEEecccchhhhHHHHHHHHHHHHHHHHHHHhhhccccccccCchhhHHHHHHHHHHhhhhccccCcCCCchhhHHHh
Q 002547 245 YWSGYYVSRPFFKAVDRVLEQTLRATEMMVALLLGYCQRAQCEKLPMSFAYKLTAARRNLALFQHHDGVTGTAKDHVVLD 324 (909)
Q Consensus 245 yWtGyyTSRp~~K~~~R~~e~~L~~aE~L~sla~~~~~~~~~~~~~~~~~~~l~~a~~~l~l~QhHDaItGTsk~~V~~D 324 (909)
||+|||||||.+|+++|++|++|+.+|.+++++.... .+..+| .+.|+.+||.|+++||||+||||++++|++|
T Consensus 1 ~h~G~~Tsr~~~K~~~r~~E~~L~~~e~~~~~~~~~~---~~~~~~---~~~l~~~wk~ll~~q~HD~i~Gt~~~~V~~d 74 (79)
T smart00872 1 YHRGTYTSRPYLKRLNRRLESLLRAAEELAALAALLL---LGYKYP---SEQLEELWKALLLNQFHDAITGTSIDEVYDD 74 (79)
T ss_pred CCCceecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCc---HHHHHHHHHHHHHhcCcccCCccCcHHHHHH
Confidence 7999999999999999999999999999999875431 245566 4679999999999999999999999999999
Q ss_pred HHHHH
Q 002547 325 YGTRM 329 (909)
Q Consensus 325 y~~rl 329 (909)
|..||
T Consensus 75 ~~~r~ 79 (79)
T smart00872 75 YETRL 79 (79)
T ss_pred HHHhC
Confidence 99875
No 11
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.6e-08 Score=124.96 Aligned_cols=253 Identities=17% Similarity=0.119 Sum_probs=168.2
Q ss_pred HHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHH--H-------HHhhcCceEEEEeeCCCCCCCCce
Q 002547 7 LNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELK--K-------ELALHQNLEYIWRQSWDTEETSDI 77 (909)
Q Consensus 7 l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k--~-------~~~~~~~~eF~Wr~~~~~~~~s~i 77 (909)
....+|...+.||.+|.||+..++|+++..+|++.+.|+|+....- + .-......|..|.++ +++++
T Consensus 110 ~~~~~~~~~~~g~~~d~~g~~~qa~~~~~~~~i~~~~f~r~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~----~~~~~ 185 (943)
T COG0383 110 DAERFGKAMKLGYFPDTFGNLGQAPQLYENAGISAVAFGRGAALIGFGQLVLFELLEAYGSDFSEITWSEP----DGSQV 185 (943)
T ss_pred HHHHhhhhhccccccccchhhhhhhHHHHhcCCchhhcccccchhhcccchhhhhhhHhcCcCcccccccC----Cchhh
Confidence 3556678899999999999999999999999999999999974211 0 011123345666665 45666
Q ss_pred EEeeCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEEe
Q 002547 78 FVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVPL 157 (909)
Q Consensus 78 ~th~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p~ 157 (909)
+-+.++. .|..+. .... +.-.-++-....-++..++++ .+..++++.
T Consensus 186 l~il~~~-~y~~g~---------------------------~I~~--~ghahid~aWlw~l~et~r~a---~ts~~~~~~ 232 (943)
T COG0383 186 LGILLAN-GYSNGN---------------------------EIPA--VGHAHIDTAWLWPLDETERKA---STSFSLVMN 232 (943)
T ss_pred HHHHHHH-Hhhccc---------------------------cccc--cchhhHHHHHhccHHHHHHHH---hhhhhheec
Confidence 6666663 332110 0000 000223334444455666666 577788999
Q ss_pred cCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceEEEeCC----HHHHHHHHHHHhhhccCCCCCCCCCCCcCCCCcccC
Q 002547 158 GDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAEAKFGT----LDDYFRTLREEADRINYSRPGEIGSGQVEGFPSLSG 233 (909)
Q Consensus 158 G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~i~~sT----~~dYf~al~~~~~~~~~~~~~~~~~~~~~~~p~~~g 233 (909)
|+|..+. +.+....+++.|.... +....|+- ...||......+ ....++.+|
T Consensus 233 l~D~~p~--------~~~~~s~~~~y~~l~~-d~p~l~~~~~v~~~~~~~~~g~~v---------------e~d~n~~sG 288 (943)
T COG0383 233 LMDHYPV--------QKFVQSAAALYNWLKP-DVPFLFSRPAVEFEQWEIVGGMWV---------------EEDLNTPSG 288 (943)
T ss_pred ccccChh--------hhhhhhHHHHHHHhcC-ccHHHhhcccccccceEEeecccc---------------cccCCcccc
Confidence 9998763 5778888888886642 12222333 223333222211 134678889
Q ss_pred CcccccccCCCce------eEEecccchhhhHHHHHHHHH-HHHHHHHH-------HHhhhccccccccCchhhHHHHHH
Q 002547 234 DFFTYADRQQDYW------SGYYVSRPFFKAVDRVLEQTL-RATEMMVA-------LLLGYCQRAQCEKLPMSFAYKLTA 299 (909)
Q Consensus 234 Dffpya~~~~~yW------tGyyTSRp~~K~~~R~~e~~L-~~aE~L~s-------la~~~~~~~~~~~~~~~~~~~l~~ 299 (909)
|+.. +...|= -..-+||..+|..+-..+..| +-+|++.. +|+.. +..+| .+.+.-
T Consensus 289 Esls---rq~~~gq~~~~~~f~~ssri~w~pd~fg~s~~Lpqil~p~gi~~f~t~klawn~-----tn~~P---h~~~~w 357 (943)
T COG0383 289 ESLS---RQFLYGQRFFTEKFGASSRIYWKPDSFGFSGQLPQILEPLGIDVFVTTKLAWND-----TNRFP---HDLLRW 357 (943)
T ss_pred chhh---hhhhccceeeecccCccceeEeehhccccchhHHHHHHhhcchhhhccccchhh-----ccCCC---hhHhee
Confidence 8863 222331 234589999999998888887 57888876 55542 66677 478889
Q ss_pred HHHHhhhhccccCcCCCchhhHHHhHHHHHHH
Q 002547 300 ARRNLALFQHHDGVTGTAKDHVVLDYGTRMHT 331 (909)
Q Consensus 300 a~~~l~l~QhHDaItGTsk~~V~~Dy~~rl~~ 331 (909)
+|+....++.||++|||+.+.|+.+...|...
T Consensus 358 ~~~dg~e~~~hds~~~~~~d~v~~~~~~r~~~ 389 (943)
T COG0383 358 RWKDGTENLAHDSICGCSSDPVHREMEYRFEK 389 (943)
T ss_pred ecccccccceeecCCCCcccHHHHHHHhhhhh
Confidence 99999999999999999999999998888876
No 12
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 57 GH57 from CAZY comprises enzymes with two known activities; alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1 from EC).; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1K1X_B 1K1W_A 1K1Y_A 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=70.75 E-value=3.4 Score=46.82 Aligned_cols=47 Identities=17% Similarity=0.429 Sum_probs=34.7
Q ss_pred hhhhHHHhhcCCCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCH
Q 002547 2 EGNMWLNDTIGFIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHY 49 (909)
Q Consensus 2 ~Gh~~l~~~fG~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~ 49 (909)
.|.+.+++.||++|+..|.+- .+.++.+..+++++||+++++.--.-
T Consensus 152 ~~~~~~~~~FG~~P~G~W~pE-~a~~~~l~~~l~~~Gi~~~i~d~~~~ 198 (360)
T PF03065_consen 152 MGREYFKKHFGRRPRGFWLPE-CAYSPGLEEILAEAGIRYTILDGHQL 198 (360)
T ss_dssp HHHHHHHHHHSS--SBEE-GG-G-B-TTHHHHHHHTT--EEEEECHHH
T ss_pred HHHHHHHHHhCCCCCceECcc-cccCHHHHHHHHHcCCEEEEECcHHh
Confidence 478899999999999999986 68999999999999999999864433
No 13
>KOG4120 consensus G/T mismatch-specific thymine DNA glycosylase [Replication, recombination and repair]
Probab=55.01 E-value=43 Score=36.15 Aligned_cols=101 Identities=18% Similarity=0.293 Sum_probs=59.5
Q ss_pred hhhhHHHhhcC-CCCCcceecCCCCCChHHHHHHHHcCCceEEEeecCHHHHHHH---hhcCceEEEEeeCCCCCCCCce
Q 002547 2 EGNMWLNDTIG-FIPKNSWAIDPFGYSATMAYLLRRMGFENMLIQRTHYELKKEL---ALHQNLEYIWRQSWDTEETSDI 77 (909)
Q Consensus 2 ~Gh~~l~~~fG-~~p~vgW~iDpFGhS~~~p~Ll~~~G~~~~v~~Ri~~~~k~~~---~~~~~~eF~Wr~~~~~~~~s~i 77 (909)
+|-|-|.+++- ++|+|| +|.++..|++-..+ ..-|.++|=|++.. -++++.
T Consensus 226 eG~RIL~eKlqryrP~Va-----------------------vFnGK~I~E~fsk~~~g~~~K~f~FG~QP~k--~~dt~t 280 (426)
T KOG4120|consen 226 EGARILYEKLQRYRPQVA-----------------------VFNGKGIWEEFSKMLTGKLPKTFVFGWQPEK--FGDTNT 280 (426)
T ss_pred cchHHHHHHHHhhCcceE-----------------------EEcCcchHHHHHHHhhccCcceeEeccCccc--CCCcce
Confidence 46666666665 467665 44566667654433 22378999998753 257999
Q ss_pred EEeeCCCCccCCCCCCCCCCcccccccccccCCcccccCCCCCCCCCCChhhHHHHHHHHHHHHHhhcccccCCeEEEE
Q 002547 78 FVHMMPFYSYDIPHTCGPEPAVCCQFDFARMGGFFYEACPWRQNPVETNQENVQERALKLLDQYKKKSTLYRTNTLLVP 156 (909)
Q Consensus 78 ~th~~~~y~Y~~p~~c~p~~~~c~~fDf~r~~g~~~~~cp~~~~p~~i~~~nv~~r~~~l~~~~~~~~~~~~tn~il~p 156 (909)
|+.+||.-| +=|-|| |.+-+..|+-....++.|+.+....+..-..+.++
T Consensus 281 fv~VmpsSS-----------aRcAq~------------------pra~dKv~~y~~lk~~rd~l~giv~h~d~qe~~yt 330 (426)
T KOG4120|consen 281 FVGVMPSSS-----------ARCAQY------------------PRAEDKVNLYNLLKEERDRLRGIVKHADVQEVQYT 330 (426)
T ss_pred EEEEccCcc-----------hhhhcC------------------ChhhhhhhHHHHHHHHHHHhhcccccccceeeEEE
Confidence 999999511 223332 22223345555566777777776655444445444
No 14
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=53.48 E-value=48 Score=41.70 Aligned_cols=70 Identities=20% Similarity=0.182 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhhcccccCCeEEEEecCCCCCCChhhHHHHHHhHHHHHHHHhcCCCCceE-EEeCCHHHHHHHHHHHh
Q 002547 132 ERALKLLDQYKKKSTLYRTNTLLVPLGDDFRYTTINEAEAQFRNYQLLFDYINSNPSLNAE-AKFGTLDDYFRTLREEA 209 (909)
Q Consensus 132 ~r~~~l~~~~~~~~~~~~tn~il~p~G~Df~y~~~~~a~~~~~n~~kli~~iN~~~~~~~~-i~~sT~~dYf~al~~~~ 209 (909)
.-+++|+.....+...-..=++|+|-|-..+..+..-| .+++.+...-+ . ++. .+-|||..||.-|+..+
T Consensus 991 tiIDefIss~e~KWgQ~S~vvlLLPHGyEGQGPdHSSa-----RiERfLqlcAe-~--nm~Va~psTPA~yFHLLRrqa 1061 (1228)
T PRK12270 991 TIIDEFISSGEAKWGQRSGVVLLLPHGYEGQGPDHSSA-----RIERFLQLCAE-G--NMTVAQPSTPANYFHLLRRQA 1061 (1228)
T ss_pred HHHHHHHhhhHhhhccccceEEEccCCcCCCCCCcchH-----HHHHHHHhhcc-C--CeEEEccCChHHHHHHHHHHh
Confidence 34566666555555443344678999965444432222 34443332222 2 333 56799999999998764
No 15
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B.
Probab=29.91 E-value=7e+02 Score=26.50 Aligned_cols=24 Identities=13% Similarity=0.304 Sum_probs=19.8
Q ss_pred eEEeeceEEEEEeccCceEEEEEc
Q 002547 499 ADIRNRHQILSFDVRHGLLQKISH 522 (909)
Q Consensus 499 ~~ieN~~~~l~fd~~~G~l~si~~ 522 (909)
++|||+.++++|+...|.|+++..
T Consensus 2 v~ven~~~~~~~s~~GG~i~~~~L 25 (270)
T PF14849_consen 2 VTVENDLFKVTFSSKGGRIKSVEL 25 (270)
T ss_dssp EEEE-SS-EEEEETBTTEEEEEEE
T ss_pred EEEECCCEEEEEECCCCeEEEEEc
Confidence 579999999999988999999984
No 16
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=21.72 E-value=1.2e+03 Score=26.26 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=23.3
Q ss_pred ceeEEeeceEEEEEeccCceEEEEEcc
Q 002547 497 DVADIRNRHQILSFDVRHGLLQKISHI 523 (909)
Q Consensus 497 ~~~~ieN~~~~l~fd~~~G~l~si~~k 523 (909)
..++|+|+.++++|+...|.|.++..|
T Consensus 74 ~~i~v~td~~~~~is~~Gg~i~~~~Lk 100 (366)
T TIGR03593 74 KRITVKTDVLRASISTKGGDIDSLELK 100 (366)
T ss_pred CeEEEECCeEEEEEeCCCceeeeeccc
Confidence 468899999999999877799998854
No 17
>PHA02100 hypothetical protein
Probab=20.03 E-value=56 Score=28.56 Aligned_cols=18 Identities=17% Similarity=0.419 Sum_probs=15.2
Q ss_pred hHHHhhcCCCCCcceecCCCCCChHH
Q 002547 5 MWLNDTIGFIPKNSWAIDPFGYSATM 30 (909)
Q Consensus 5 ~~l~~~fG~~p~vgW~iDpFGhS~~~ 30 (909)
|||.++||+. +|||.++-
T Consensus 65 QYIl~EFd~q--------AfGhtpth 82 (112)
T PHA02100 65 QYISEEFGTQ--------ALGHTPTH 82 (112)
T ss_pred HHHHHHhCcc--------ccCCCCCc
Confidence 7899999986 69999864
Done!