BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002557
(908 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa]
Length = 894
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/899 (67%), Positives = 701/899 (77%), Gaps = 60/899 (6%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKN 60
MALVPSRQ DSFQSSFSKFHGT FFR S PL++ Y + S +KN
Sbjct: 1 MALVPSRQLY-----IDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGY----ACSITDKN 51
Query: 61 PPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120
P K+ SF T DK NL + SSW WNKPNK N + PQA +YR NN +
Sbjct: 52 PSTKSTSFPT-------DKSKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSNS 104
Query: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERV 180
S G STM KIVEKLKK GY+ DGD +E + + +ERV
Sbjct: 105 SGSG------------------STMEKIVEKLKKHGYM-------DGDVNENKERMQERV 139
Query: 181 IEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLV 240
IEKGS+EDIFYVEEG+LPNARGGFSKESPLG+ + SDGEV+FPWEK K+E EG+W
Sbjct: 140 IEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKEEDEGKW-T 198
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
R SRTSLAELTLPESELRRLRNLT+ TKSKTR+ G G+TQ VVD IH+KWKTSEI R+
Sbjct: 199 ARSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARV 258
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
K+EGAPALNMKRMHEILE KTGGLVIWRSG VSLYRGVSYE P+++ KRI+K+ E +
Sbjct: 259 KVEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSS 318
Query: 361 SSVSQAT------------DKQIHK-QISMSVNLETASEEQETDFVREVKYEDEVEKLLD 407
+S+ AT D +IH + +N+E A++ +ET +VKYEDEV+KLLD
Sbjct: 319 NSLPAATSITIGSQSKNSPDNEIHAPRPKTEINVEAANQ-KETKTQTDVKYEDEVDKLLD 377
Query: 408 GLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLP 467
GLGPRYTDWPG DPLPVDADMLPG++PGYQPPFR+LPYGVR TL R+++T+L+RLARVLP
Sbjct: 378 GLGPRYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLP 437
Query: 468 PHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRN 527
PHFA+GRSRQLQGLAVAMIKLWEKSSI K+ALKRGVQLTTSERM EDIKKLTGG LLSRN
Sbjct: 438 PHFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRN 497
Query: 528 KDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAG 587
KDFLVFYRGK+FLSP+V+EAL ERERLAKSLQDEEEQARLRASA V+PS E +E+SG AG
Sbjct: 498 KDFLVFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAG 557
Query: 588 TLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSK 647
+L+ETLDA+++WGKRLDD HKE ++REAE+ RHA +V++LEKKLA A+RKL RAER L+K
Sbjct: 558 SLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNK 617
Query: 648 VEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 707
VE LKP+ERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL
Sbjct: 618 VEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 677
Query: 708 VKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLL 767
VKII+K K+F+Q KKIALALEAESGGVLVSVDKISKGYA++VYRGKDYQRPS LRPKNLL
Sbjct: 678 VKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLL 737
Query: 768 TKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYAT 827
TKRKALARSIE+QR EAL HV+ LE ++RSEIEQM VK GDE+LYD+LDSAY T
Sbjct: 738 TKRKALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVKDKGDEELYDRLDSAYLT 797
Query: 828 --EDDDSEDEGDEAYLEMYAGGN--DNEDEIDNSTHNLEMESDFPYHAQDQESETELMD 882
+ DDSEDEGDEAYLE Y N D +DE D++ HN ++++ + Q QESETE D
Sbjct: 798 DDDADDSEDEGDEAYLETYNSENDVDYDDETDSTVHNAHLDTNLLNNVQIQESETEPED 856
>gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/905 (64%), Positives = 682/905 (75%), Gaps = 53/905 (5%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKN 60
MAL+PSRQF P T F FH T FFR G S + Y ++ +++ N
Sbjct: 1 MALLPSRQFYPTTTSF------LDSFHSTRLQFFRYGSSNRFRTHSSYVTRNTIASNSTN 54
Query: 61 PPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120
P RK+ TN SQ+D S +W+ KWN P++ + K + +NYR +
Sbjct: 55 PQRKSNIVFTNTPVSQYDS--GGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNSETVS 112
Query: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERV 180
+ G + S TM KIVEKLKKFGY+ D E + +ER+
Sbjct: 113 RSDGGSGGGS-------------TMEKIVEKLKKFGYMDDVK--------ETKENVQERI 151
Query: 181 IEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLV 240
IEKGSIEDIFY+EEG+LPN +GGFS +SPLG+ + +GEV+FPWE+ K V EG +
Sbjct: 152 IEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPK--VEEGSVRI 209
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
K SRTSLAELTLPESELRRLRNLT +TK+KT+I G G+TQAVVD+I EKWKTSEIV+L
Sbjct: 210 K---SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKL 266
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
K EGA ALNM+R+HEILERKTGGLVIWRSGT+VSLYRGVSYEVP VQLNKR+YK+NE
Sbjct: 267 KCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP-VQLNKRVYKKNETSH 325
Query: 361 SSVSQATDKQI----------------HKQISMSVNLETASEEQETDFVREVKYEDEVEK 404
SS S T ++ + S ++ + D EVKYEDE++K
Sbjct: 326 SSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLXITDGENKDTESEVKYEDEIDK 385
Query: 405 LLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLAR 464
LLDGLGPRYTDWP CDPLP+DAD+LPG + GYQPPFR+LPYGVRS+L KEAT L+RLAR
Sbjct: 386 LLDGLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLAR 445
Query: 465 VLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLL 524
VLPPHFALGRSRQL+GLA+AMIKLWE+SSIAK+ALKRGVQLTTSERM EDIKKLTGG LL
Sbjct: 446 VLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLL 505
Query: 525 SRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSG 584
SRNKDFLVFYRGKNFLS DVTEAL ERERLAK+LQDEEEQARLRAS + P++ E+ G
Sbjct: 506 SRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVG 565
Query: 585 TAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERA 644
+AGTL ETL+A++RWGKRLDD K+ ++++AEV RHA LV+KLE++LA AERKL++AE A
Sbjct: 566 SAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENA 625
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
LSKVEE LKPA R ADPESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKY
Sbjct: 626 LSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKY 685
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPK 764
RELVKIIVK KTFDQ KK ALALE+ESGGVLVSVDK+SKG+A+VV+RGKDYQRPSTLRPK
Sbjct: 686 RELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPK 745
Query: 765 NLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSA 824
NLLTKRKALARSIELQR+EAL H++ L+ N +LRSEIEQM+ VK GDE+LYDKLDSA
Sbjct: 746 NLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSA 805
Query: 825 YATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETE--LMD 882
YATED+ +E+EGDEAYLE YA ND E E DNS HN +E++FPY QD+E ETE + D
Sbjct: 806 YATEDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQDEEFETEAAVQD 865
Query: 883 SESEA 887
ESE
Sbjct: 866 EESET 870
>gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera]
Length = 902
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/910 (64%), Positives = 689/910 (75%), Gaps = 63/910 (6%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKN 60
MAL+PSRQF P T F FH T FFR G S + Y ++ +++ N
Sbjct: 1 MALLPSRQFYPTTTSF------LDSFHSTRLQFFRYGSSNRFRTHSSYVARNTIASNSTN 54
Query: 61 PPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120
P RK+ TN SQ+D S +W+ KWN P++ + K + +NYR +
Sbjct: 55 PQRKSNIVFTNTPVSQYDS--GGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRNSETVS 112
Query: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERV 180
+ G + S TM KIVEKLKKFGY+ D E + +ER+
Sbjct: 113 RSDGGSGGGS-------------TMEKIVEKLKKFGYMDD--------VKETKENVQERI 151
Query: 181 IEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLV 240
IEKGSIEDIFY+EEG+LPN +GGFS +SPLG+ + +GEV+FPWE+ K V EG +
Sbjct: 152 IEKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPK--VEEGSVRI 209
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
K SRTSLAELTLPESELRRLRNLT +TK+KT+I G G+TQAVVD+I EKWKTSEIV+L
Sbjct: 210 K---SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKL 266
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
K EGA ALNM+R+HEILERKTGGLVIWRSGT+VSLYRGVSYEVP VQLNKR+YK+NE
Sbjct: 267 KCEGAAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP-VQLNKRVYKKNETSH 325
Query: 361 SSVSQAT--------------------DKQIH-KQISMSVNLETASEEQETDFVREVKYE 399
SS S T ++ +H Q ++++ T E ++T+ EVKYE
Sbjct: 326 SSFSSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNI---TDGENKDTE--SEVKYE 380
Query: 400 DEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNL 459
DE++KLLDGLGPRYTDWPGCDPLP+DAD+LPG + GYQPPFR+LPYGVRS+L KEAT L
Sbjct: 381 DEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATAL 440
Query: 460 QRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLT 519
+RLARVLPPHFALGRSRQL+GLA+AMIKLWE+SSIAK+ALKRGVQLTTSERM EDIKKLT
Sbjct: 441 RRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLT 500
Query: 520 GGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIET 579
GG LLSRNKDFLVFYRGKNFLS DVTEAL ERERLAK+LQDEEEQARLRAS + P++
Sbjct: 501 GGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGI 560
Query: 580 IEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLL 639
E+ G+AGTL ETL+A++RWGKRLDD K+ ++++AEV RHA LV+KLE++LA AERKL+
Sbjct: 561 TEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLM 620
Query: 640 RAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMH 699
+AE ALSKVEE LKPA R ADPESITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMH
Sbjct: 621 KAENALSKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMH 680
Query: 700 LHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPS 759
LHWKYRELVKIIVK KTFDQ KK ALALE+ESGGVLVSVDK+SKG+A+VV+RGKDYQRPS
Sbjct: 681 LHWKYRELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPS 740
Query: 760 TLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYD 819
TLRPKNLLTKRKALARSIELQR+EAL H++ L+ N +LRSEIEQM+ VK GDE+LYD
Sbjct: 741 TLRPKNLLTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYD 800
Query: 820 KLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETE 879
KLDSAYATED+ +E+EGDEAYLE YA ND E E DNS HN +E++FPY Q +E ETE
Sbjct: 801 KLDSAYATEDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQGEEFETE 860
Query: 880 --LMDSESEA 887
+ D ESE
Sbjct: 861 AAVQDEESET 870
>gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/881 (64%), Positives = 662/881 (75%), Gaps = 70/881 (7%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSI-PLKNRFFYQN-----FSSN 54
MALVP+R F FDSF SS FH F HS+ P N F + F N
Sbjct: 1 MALVPTRPF------FDSFHSS-PNFHSLRFCNSLFRHSLTPSPNSTFLRRKPLFIFRCN 53
Query: 55 SAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKP-NKYNRLKPPQASVNY 113
A SFST+ WL +WN P N + R KPP A ++Y
Sbjct: 54 PAK---------SFSTDKH-----------------WLKRWNDPTNNHARPKPPCAVLDY 87
Query: 114 RKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERR 173
+N S G A +D +G G + GGSTM +IVEKLKKFGYV DG
Sbjct: 88 SENG-HASKSGLASSDEEG---GDGNTGGSTMDRIVEKLKKFGYVEDGI----------- 132
Query: 174 GQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEV 233
Q KERVIEKGS+EDIFYVEEG+LPN+RGGFS ESPLG G D EV+FPWEK E
Sbjct: 133 -QNKERVIEKGSVEDIFYVEEGMLPNSRGGFSSESPLGFGSFGSDDREVRFPWEKPVVEE 191
Query: 234 AEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWK 293
E R ++ RS +TSLAELTLPESEL+RL LTF+ K KTRI +G+TQAVVD IHE+WK
Sbjct: 192 LEERKSMRSRS-KTSLAELTLPESELKRLLKLTFEKKHKTRIGRSGVTQAVVDKIHERWK 250
Query: 294 TSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIY 353
TSEIVRLK EG ALNMKRMHEILERKTGGLVIWRSG +VSLYRGVSYEVPSVQ NK+IY
Sbjct: 251 TSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYEVPSVQQNKKIY 310
Query: 354 KRNE-----LPA---SSVSQATDKQIHKQISMSV-NLETASEEQETDFVREVKYEDEVEK 404
+++E LP +SV +D + S + LE+ ++E+E D++ +V YE EV+K
Sbjct: 311 RKSENSSKLLPTPSYNSVGNPSDIASNSGTSAPLAKLESTNDEKERDYLPKVNYEHEVDK 370
Query: 405 LLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLAR 464
LLDGLGPRYTDWPGCDPLPVDADMLP VPGYQPPFRVLP+GVR+TL +EAT L+R+AR
Sbjct: 371 LLDGLGPRYTDWPGCDPLPVDADMLPVTVPGYQPPFRVLPFGVRATLGLREATALRRIAR 430
Query: 465 VLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLL 524
LPPHFALGR+RQLQGLAVAMIKLWE SSIAK+ALKRGVQLTTSERM E+IKKLTGG LL
Sbjct: 431 TLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALKRGVQLTTSERMAEEIKKLTGGILL 490
Query: 525 SRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSG 584
SRNKDFLVF+RGKNFLS DVT+AL ERER+AK +QDEEEQARLRAS+ ++P+ T E S
Sbjct: 491 SRNKDFLVFFRGKNFLSADVTQALLERERMAKVMQDEEEQARLRASSLLIPTNNTSELSA 550
Query: 585 TAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERA 644
AGTL ETLDA+++WGK LD+ HK+ ++RE E RHA LV+KLE+KL+ AERKL RAE+A
Sbjct: 551 EAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSFAERKLRRAEKA 610
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L KVE LKP+E +ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKY
Sbjct: 611 LMKVESFLKPSEYKADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKY 670
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPK 764
RELVKIIVK KTF+Q KKIALALEAESGGVLVSVDK+SKGY+++VYRGKDYQRPSTLRPK
Sbjct: 671 RELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDKVSKGYSVIVYRGKDYQRPSTLRPK 730
Query: 765 NLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSA 824
NLLTKRKALARSIELQR EAL+ H++TL+S GR+RSEIEQM VK GDE LYDKLDSA
Sbjct: 731 NLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEALYDKLDSA 790
Query: 825 YATEDDDSE----DEGDEAYLEMYAGGNDNEDEIDNSTHNL 861
Y ++D++SE ++GDEAYL+ Y ND+E E + + N+
Sbjct: 791 YPSDDENSEVEDGEQGDEAYLKTYNSENDSEIESEVESDNM 831
>gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/896 (62%), Positives = 670/896 (74%), Gaps = 43/896 (4%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKN 60
MAL+ SR C AT FD+FQ+ +FH +H + G S+ +NR F +F + +
Sbjct: 1 MALLHSR-LCHATNFFDTFQT---EFHSSHI-LLKYGSSVVFRNRSFCSSFYGLTTDTFS 55
Query: 61 PPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNY---RKNN 117
S S+ +++ N S SW+ +WN+ K NR KPP+A ++Y +N
Sbjct: 56 NGISYGSLSSRTPVYRYNLRRN---LSRVSWIDRWNETAKRNRPKPPRAVLDYPSSDENE 112
Query: 118 VDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGK 177
V +S+ GF+++ + + GGSTM KIV KLKKFGY+ +DE + +G+
Sbjct: 113 VSISSTGFSKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYI----------DDENKEKGE 162
Query: 178 ERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGR 237
ER IEKGS+EDI Y+EEG+LPN RGGFSKESP+G GSDGEV+FPWEK KE+ E
Sbjct: 163 ERAIEKGSVEDILYIEEGMLPNTRGGFSKESPMGDENMFGSDGEVRFPWEKPKEK--EDT 220
Query: 238 WLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEI 297
R SLA+LTLPE ELRRLRNLTFQ + K +I G G+TQAVVD+IHEKWK+SEI
Sbjct: 221 HGDSTRRGSASLAQLTLPEPELRRLRNLTFQKRHKMKIGGGGVTQAVVDVIHEKWKSSEI 280
Query: 298 VRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV-QLNKRIYKRN 356
VRLKI G PALNMKRMHEILERKTGGLVIWRSGT++SLYRGVSYE+P Q NKRIYKRN
Sbjct: 281 VRLKILGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYELPEAPQFNKRIYKRN 340
Query: 357 ELPA-----SSVSQATDKQIHKQI--------SMSVNLETASEEQETDFVREVKYEDEVE 403
E+ A +S ++ H+ + S+ E SE Q T +V YEDEV
Sbjct: 341 EITALPKTGASTIAPSESSSHRNVYALQQKRAETSIEGEHCSE-QLTKV--QVNYEDEVN 397
Query: 404 KLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLA 463
KLLDGLGPRYTDWPG DPLPVDADMLPG+VP Y+PPFR+LPYGVRS++ KEAT L+RLA
Sbjct: 398 KLLDGLGPRYTDWPGLDPLPVDADMLPGVVPDYEPPFRILPYGVRSSIGVKEATALKRLA 457
Query: 464 RVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTL 523
R LPPHFALGR+RQLQGLA+AM KLWE+S IAKIALKRGVQLTTSERM E+IKKLTGG L
Sbjct: 458 RRLPPHFALGRNRQLQGLAIAMTKLWERSLIAKIALKRGVQLTTSERMAEEIKKLTGGML 517
Query: 524 LSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKS 583
LSRNKDFLVFYRGK+FLSP+VTEAL ERERLAKSLQD+EEQARL+ASAFV+P IE E+S
Sbjct: 518 LSRNKDFLVFYRGKSFLSPEVTEALLERERLAKSLQDKEEQARLKASAFVVP-IEKTEQS 576
Query: 584 GTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAER 643
GTAG+L+ETLDA++RWGK LDD HKEN++REAE RH LV+KLE+KLA AERKL++AER
Sbjct: 577 GTAGSLEETLDADARWGKALDDKHKENVMREAEQLRHTDLVRKLERKLAFAERKLVKAER 636
Query: 644 ALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWK 703
L+KVE + PA+RQA+P+SIT+EERFMFRKLGLRMKAFLLLGRR VFDGTVENMHLHWK
Sbjct: 637 TLAKVEAFMTPAKRQAEPDSITEEERFMFRKLGLRMKAFLLLGRREVFDGTVENMHLHWK 696
Query: 704 YRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRP 763
YRELVKI++K +FD K IAL LEAESGGVLVS+DK+SKGYA++VYRGKDY+RPS LRP
Sbjct: 697 YRELVKIMIKANSFDHVKNIALQLEAESGGVLVSIDKVSKGYAIIVYRGKDYKRPSLLRP 756
Query: 764 KNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDS 823
KNLLTKRKALARSIELQR EALLKH++ ++S G+L SEIEQM VK GDE LY+ LDS
Sbjct: 757 KNLLTKRKALARSIELQRHEALLKHISAMQSKVGKLNSEIEQMEKVKDQGDEVLYNTLDS 816
Query: 824 AYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETE 879
AY T D+DSEDE + Y E Y +D EDE D + +E D Q QESE E
Sbjct: 817 AYPT-DNDSEDENSDTY-EAYDQDSDVEDEDDIMASDEYLEGDISNGIQVQESEVE 870
>gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/763 (70%), Positives = 628/763 (82%), Gaps = 27/763 (3%)
Query: 145 MGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGK-ERVIEKGSIEDIFYVEEGLLPNARGG 203
M KIVEKLKK GY+ DG+ DE++ + ERVI+KGS+EDIFYVEEG LPN+RGG
Sbjct: 1 MEKIVEKLKKHGYI-------DGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGG 53
Query: 204 FSKESPLGLGEEVGSDGEVKFPWEK-RKEEVAEGRWLVKRRSSRTSLAELTLPESELRRL 262
FSKESPLG+ + S+GEV+FPWEK ++EE+ + R SRT LAELTLPESELRRL
Sbjct: 54 FSKESPLGVEDVFKSNGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRL 113
Query: 263 RNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTG 322
RNLT+Q KSK R+KGAG+TQ VVD IH++WKTSEIVR+K+EGAPALNM+RMHEILERKTG
Sbjct: 114 RNLTYQIKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTG 173
Query: 323 GLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATD--KQIHKQISMS-- 378
GLVIWRSGT+VSLYRGVSYE PSVQLNK+I KRNEL +S+S AT + K + S
Sbjct: 174 GLVIWRSGTSVSLYRGVSYEDPSVQLNKQILKRNELSNNSLSTATGIIRSPSKSAASSDL 233
Query: 379 ----VNLETASE---EQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPG 431
+N ++ +E ++E + EVKYEDEV+KLL+GLGPRYTDW G DPLPVDADMLPG
Sbjct: 234 NMPHLNSDSTAEGEEKKEIEMETEVKYEDEVDKLLEGLGPRYTDWAGLDPLPVDADMLPG 293
Query: 432 IVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEK 491
I+PGYQPPFR+LPYGVRS+L +KEAT+L+RLAR+LPPHFALGRSRQLQGLA AMIKLWEK
Sbjct: 294 IIPGYQPPFRILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKLWEK 353
Query: 492 SSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 551
SSIAKI+LKRGVQLTTSERM EDIKKLTGG LLSRNKDFLVFYRGK+FLSP+VTEAL ER
Sbjct: 354 SSIAKISLKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEALVER 413
Query: 552 ERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENL 611
ERLA+SLQD+EEQARLRASA + + ET+E+ GTAGTL+ETLDA++RWGK LD +H+E +
Sbjct: 414 ERLAQSLQDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKI 473
Query: 612 VREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFM 671
+REAE+ RHA LV+KLE KLA AE+KL++AERALSKVE LKPAERQADPESITDEERFM
Sbjct: 474 MREAEIARHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEERFM 533
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKII+K K +Q KKIALALEAES
Sbjct: 534 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAES 593
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVAT 791
GG+LVSVD++SKGYA++V+RGKDYQRPS LRP NLLTKRKALARSIE+QR EALLKH++
Sbjct: 594 GGILVSVDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEALLKHISA 653
Query: 792 LESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNE 851
L+ ++R EI QM VK GDE+LYD+LD+ Y T+DDD+E+E DEAYL Y D
Sbjct: 654 LQKKVDKIRYEIAQMEKVKDQGDEELYDRLDATYPTDDDDTEEEEDEAYLGAYISKGDAN 713
Query: 852 DEIDNST----HNLEMESDFPYHAQDQESETELMDSESEAYTV 890
D+ T H++ +E+ Y Q QESETE SE Y +
Sbjct: 714 SAADDETGGIVHSVRLETGNLYDVQHQESETE---SEVSIYLI 753
>gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/882 (60%), Positives = 638/882 (72%), Gaps = 84/882 (9%)
Query: 1 MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAH--E 58
MAL+P+RQ P F +S FH + FF S ++ F ++ + N +
Sbjct: 1 MALLPTRQLHP-------FHTS-PNFHHS-IRFFTTISSSSIQKSFIFKTPTKNFTYLSS 51
Query: 59 KNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNV 118
KNP SF T+ +WL +WN+ NR KPP+ +NY+
Sbjct: 52 KNPIFHLKSFCTD------------------TWLKRWNE---QNRPKPPRGVLNYQ---- 86
Query: 119 DLSALGFARTDSDGNGVGGVDD---------GGSTMGKIVEKLKKFGYVGDGDGDGDGDN 169
GNG D GGS M +IVEKLKKFGY ++
Sbjct: 87 -----------GSGNGHSSKSDFDSSDDEDFGGSRMDRIVEKLKKFGY----------ES 125
Query: 170 DERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEE-VGSDGEVKFPWEK 228
DE +E VIEKGS+EDIFYVEEG+LPN RGGFS ESP G+G G GEV+FPWEK
Sbjct: 126 DENENIKEEGVIEKGSMEDIFYVEEGMLPNTRGGFSPESPFGIGSYGSGDGGEVRFPWEK 185
Query: 229 R--KEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVD 286
EEV E R+ S+TS+AELTLPESELRRL LTF K KTRI G G+TQA VD
Sbjct: 186 PVVDEEVEER--TSSRKKSKTSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAAVD 243
Query: 287 IIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV 346
IHE+WKTSEIVRLK EG ALNMKRMHEILE+KTGGLVIWRSG +VSLYRGVSY+ PS+
Sbjct: 244 KIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSGNSVSLYRGVSYKDPSI 303
Query: 347 QLNKRIYKRNELPASSVSQATDK--------QIHKQISMSV-NLETASEEQETDFVREVK 397
Q NK++Y++NE +S +D + S+ LE+ ++++E + ++
Sbjct: 304 QQNKQLYRKNEKSLKFLSAPSDDFEVEPSEFTTDSETKTSLEKLESTNDQKEKVNLPKIS 363
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
YEDEV+KLLDGLGPRYTDWPGC+PLPVDADMLP VPGYQPPFRVLP+GVR TL KEAT
Sbjct: 364 YEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQPPFRVLPFGVRPTLGFKEAT 423
Query: 458 NLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKK 517
+L+R+AR LPPHFALGR+RQLQGLA AMIKLWEKSSIAK+ALKRGVQLTTSERM E+IKK
Sbjct: 424 SLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKK 483
Query: 518 LTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI 577
LTGG +LSRNKDFLVFYRGKNFLSPDVT+AL ERE++AKS+QDEEEQARLRAS+ +LP+I
Sbjct: 484 LTGGIILSRNKDFLVFYRGKNFLSPDVTQALLEREKMAKSMQDEEEQARLRASSLILPAI 543
Query: 578 ETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERK 637
T E S AGTL ETLDA+++WGK LD+ H++ ++RE E RHA +V+KLE+KL+ AERK
Sbjct: 544 NTSELSAEAGTLGETLDADAKWGKTLDECHEQKVMREVEQLRHANIVRKLEEKLSLAERK 603
Query: 638 LLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVEN 697
+ RAERAL KVE SLKP+E +ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+EN
Sbjct: 604 IRRAERALMKVEVSLKPSETRADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 663
Query: 698 MHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQR 757
MHLHWKYRELVKIIVK F+ KKIALALEAESGGVLVSVDK+SKGY+++VYRGKDYQR
Sbjct: 664 MHLHWKYRELVKIIVKANNFEHVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYQR 723
Query: 758 PSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQL 817
PS LRPKNLLTKRKALARSIELQR EAL H++TL+S +LRSEIEQ+ VK GDE L
Sbjct: 724 PSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKLRSEIEQIEKVKEEGDEAL 783
Query: 818 YDKLDSAYAT----EDDDSEDEGDEAYLEMYAGGNDNEDEID 855
Y++LDSAY+T + + E+E EAYL+ ND+E E D
Sbjct: 784 YNRLDSAYSTDDDNSEAEDEEEEVEAYLQSDNDENDSEVESD 825
>gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/868 (60%), Positives = 643/868 (74%), Gaps = 65/868 (7%)
Query: 1 MALVPSRQFCPATA---IFDSFQSSFSKFHGTHFHFFRCGHSIPL---KNRFFYQNFSSN 54
MA+ PS F P T SFQSSF F R SI + K F
Sbjct: 1 MAMKPSLHFYPTTVTKKFVYSFQSSFCS------RFIRYSSSISIGSCKGVVF------- 47
Query: 55 SAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYR 114
S+ P + SFS +D N + WL WN+ K N+ KPP+ VNYR
Sbjct: 48 SSRNYQIPSRRFSFS---------RDGN-----NGEWLENWNRIQKRNQPKPPKVVVNYR 93
Query: 115 KNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRG 174
K +S G+ D GSTM KIVEKLKK+GY+ G+ + N E
Sbjct: 94 KEGGIVS----------GDDNRSRDGEGSTMEKIVEKLKKYGYMEKGE---EVQNKEIE- 139
Query: 175 QGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK---RKE 231
+ER IEKGS+EDIFYVEEG LPN RGGF++ES LG + GS+GEV FPWEK +++
Sbjct: 140 --QERRIEKGSVEDIFYVEEGNLPNTRGGFTEESLLGRDDVFGSNGEVGFPWEKMSAKEK 197
Query: 232 EVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEK 291
+ E W K+ +R SLAE+TLPESELRRLRNLTF+T SK RI+GAG+TQ VD I EK
Sbjct: 198 KELEAEWTAKK-ENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGAGVTQVAVDAIKEK 256
Query: 292 WKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKR 351
WK++EIVRLKIEGA ALNM++MHEILE+KTGGLVIWRSGT++SLYRGVSYE+PS + NK+
Sbjct: 257 WKSAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQ 316
Query: 352 IYKRNELPASSVSQAT------DKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKL 405
+R E P SS+ + T D ++H + + T+ E+++ +V+YEDE+++L
Sbjct: 317 --RREETPPSSLPETTTMVDNSDGKVH--LPQLEQVTTSVEKKDQTSQPDVEYEDEIDEL 372
Query: 406 LDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARV 465
LDGLGPR+ DWPG +PLPVDAD+LPG +PGY+PPFRVLPYGVRS+L KEAT L+RLAR
Sbjct: 373 LDGLGPRFMDWPGDNPLPVDADLLPGAIPGYEPPFRVLPYGVRSSLGPKEATALRRLARS 432
Query: 466 LPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS 525
+PPHFALGRSRQLQGLA AM++LWEKS +AKIA+KRGVQ TTSERM ED+KKLTGG LLS
Sbjct: 433 IPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGILLS 492
Query: 526 RNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR-ASAFVLPSIETIEKSG 584
RNKDFLVFYRGKNFLS +V +AL E+ER ++LQDEEEQARLR +SA ++P IE +K
Sbjct: 493 RNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPCIEPPKKLV 552
Query: 585 TAGTLKETLDANSRWGKRLDDS-HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAER 643
+AGTL ETLDA +WGK LDD H + + +E E+ RH LV+KLE+KLA AERKLL+AER
Sbjct: 553 SAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAER 612
Query: 644 ALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWK 703
L+KVEE LKPAE++ DP+SITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMHLHWK
Sbjct: 613 GLAKVEECLKPAEQREDPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWK 672
Query: 704 YRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRP 763
YRELVKIIVK KTFD KK+ALALEAESGG+LVS+DK++KGYA++VYRGKDY+RP+ LRP
Sbjct: 673 YRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGKDYKRPTMLRP 732
Query: 764 KNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDS 823
KNLLTKRKALARSIELQR+E LLKH++T+++ A +LR+EIEQM V GDE+LY+KLD
Sbjct: 733 KNLLTKRKALARSIELQRREGLLKHISTMQAKAEQLRAEIEQMEKVTDKGDEELYNKLDM 792
Query: 824 AYATEDDDSEDEGDEAYLEMYAGGNDNE 851
AYA+ D+++++E D+A+ E YA G+D E
Sbjct: 793 AYASSDEETDEEEDDAFPETYAVGDDGE 820
>gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana]
Length = 881
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/843 (59%), Positives = 616/843 (73%), Gaps = 58/843 (6%)
Query: 1 MALVPSRQFCPATA---IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAH 57
MA+ PS FCP T SFQSSF F F R SI L +
Sbjct: 1 MAMKPSLHFCPTTVTKKFVYSFQSSFC------FRFLRYSSSISLGSC------------ 42
Query: 58 EKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNN 117
K +FS+ N + + C++ WL WN+ K N+ KPP+ VNYRK
Sbjct: 43 ------KGVTFSSRNDQIASRRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEG 96
Query: 118 VDLSALGFARTD-SDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQG 176
F+ ++ G+ D GSTM KIVEKLKK+GY+ + + +
Sbjct: 97 ------RFSGSEIVSGDDNRSRDGDGSTMEKIVEKLKKYGYM---------EEVQNKEIE 141
Query: 177 KERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK---RKEEV 233
+ER IEKGS+EDIFYVEEG LPN RGGF++ES LG +GS+G+V FPWEK ++++
Sbjct: 142 QERRIEKGSVEDIFYVEEGKLPNTRGGFTEESLLGGENVIGSNGDVGFPWEKMSAKEKKE 201
Query: 234 AEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWK 293
E W K+ +R SLAE+TLPESELRRLRNLTF+T SK RI+G G+TQ VD I EKWK
Sbjct: 202 LEAEWTAKK-ENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWK 260
Query: 294 TSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIY 353
++EIVRLKIEGA ALNM++MHEILE+KTGGLVIWRSGT++SLYRGVSYE+PS + NK+
Sbjct: 261 SAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQ-- 318
Query: 354 KRNELPASSV-------SQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLL 406
+R E P +V + DK K + ET S E++ V+YEDE+++LL
Sbjct: 319 RREETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELL 378
Query: 407 DGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVL 466
D LGPR+ DWPG +PLPVDAD+LPG +P Y+PPFRVLPYGVRS+L KEAT L+RLAR +
Sbjct: 379 DDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSI 438
Query: 467 PPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR 526
PPHFALGRSRQLQGLA AM++LWEKS +AKIA+KRGVQ TTSERM ED+KKLTGG +LSR
Sbjct: 439 PPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSR 498
Query: 527 NKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR-ASAFVLPSIETIEKSGT 585
NKDFLVFYRGKNFLS +V +AL E+ER ++LQDEEEQARLR +SA ++PS E K +
Sbjct: 499 NKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVS 558
Query: 586 AGTLKETLDANSRWGKRLDDS-HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERA 644
AGTL ETLDA +WGK LDD H + + +E E+ RH LV+KLE+KLA AERKLL+AER
Sbjct: 559 AGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERG 618
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L+KVE LKPAE++ DPESITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMHLHWKY
Sbjct: 619 LAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKY 678
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPK 764
RELVKIIVK KTFD KK+ALALEAESGG+LVS+DK++KGYA++VYRG+DY+RP+ LRPK
Sbjct: 679 RELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPK 738
Query: 765 NLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSA 824
NLLTKRKALARSIELQR+E LLKH++T+++ A +LR+EIEQM V GDE+LY+KLD A
Sbjct: 739 NLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMA 798
Query: 825 YAT 827
YA+
Sbjct: 799 YAS 801
>gi|9294196|dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/843 (58%), Positives = 604/843 (71%), Gaps = 89/843 (10%)
Query: 1 MALVPSRQFCPATA---IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAH 57
MA+ PS FCP T SFQSSF F F R
Sbjct: 1 MAMKPSLHFCPTTVTKKFVYSFQSSFC------FRFLRD--------------------- 33
Query: 58 EKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNN 117
C++ WL WN+ K N+ KPP+ VNYRK
Sbjct: 34 ----------------------------CNNGVWLENWNRIQKRNQPKPPKVVVNYRKEG 65
Query: 118 VDLSALGFARTD-SDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQG 176
F+ ++ G+ D GSTM KIVEKLKK+GY+ + + +
Sbjct: 66 ------RFSGSEIVSGDDNRSRDGDGSTMEKIVEKLKKYGYM---------EEVQNKEIE 110
Query: 177 KERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK---RKEEV 233
+ER IEKGS+EDIFYVEEG LPN RGGF++ES LG +GS+G+V FPWEK ++++
Sbjct: 111 QERRIEKGSVEDIFYVEEGKLPNTRGGFTEESLLGGENVIGSNGDVGFPWEKMSAKEKKE 170
Query: 234 AEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWK 293
E W K+ +R SLAE+TLPESELRRLRNLTF+T SK RI+G G+TQ VD I EKWK
Sbjct: 171 LEAEWTAKK-ENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWK 229
Query: 294 TSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIY 353
++EIVRLKIEGA ALNM++MHEILE+KTGGLVIWRSGT++SLYRGVSYE+PS + NK+
Sbjct: 230 SAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQ-- 287
Query: 354 KRNELPASSV-------SQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLL 406
+R E P +V + DK K + ET S E++ V+YEDE+++LL
Sbjct: 288 RREETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELL 347
Query: 407 DGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVL 466
D LGPR+ DWPG +PLPVDAD+LPG +P Y+PPFRVLPYGVRS+L KEAT L+RLAR +
Sbjct: 348 DDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSI 407
Query: 467 PPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR 526
PPHFALGRSRQLQGLA AM++LWEKS +AKIA+KRGVQ TTSERM ED+KKLTGG +LSR
Sbjct: 408 PPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSR 467
Query: 527 NKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR-ASAFVLPSIETIEKSGT 585
NKDFLVFYRGKNFLS +V +AL E+ER ++LQDEEEQARLR +SA ++PS E K +
Sbjct: 468 NKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVS 527
Query: 586 AGTLKETLDANSRWGKRLDDS-HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERA 644
AGTL ETLDA +WGK LDD H + + +E E+ RH LV+KLE+KLA AERKLL+AER
Sbjct: 528 AGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERG 587
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L+KVE LKPAE++ DPESITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMHLHWKY
Sbjct: 588 LAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKY 647
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPK 764
RELVKIIVK KTFD KK+ALALEAESGG+LVS+DK++KGYA++VYRG+DY+RP+ LRPK
Sbjct: 648 RELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPK 707
Query: 765 NLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSA 824
NLLTKRKALARSIELQR+E LLKH++T+++ A +LR+EIEQM V GDE+LY+KLD A
Sbjct: 708 NLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMA 767
Query: 825 YAT 827
YA+
Sbjct: 768 YAS 770
>gi|297800788|ref|XP_002868278.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
gi|297314114|gb|EFH44537.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
Length = 919
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/964 (54%), Positives = 643/964 (66%), Gaps = 125/964 (12%)
Query: 1 MALVPSRQFCPATA---IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAH 57
MA+ SR FCP T DS SSF K HG SI L++ F +F
Sbjct: 1 MAINSSRHFCPTTTSAKFSDSLGSSFCKLHGK-------SSSISLRSYIFGFSFI----- 48
Query: 58 EKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNN 117
K R +C S SSS WN+ + N+ +P + +N RK
Sbjct: 49 -KKVKRLSCEGS-----------------GSSSRNENWNRNQRQNQFRPSKVVLNRRKEE 90
Query: 118 VDLSALGF--ARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQ 175
S LG S + VGG GGSTM KIVEKLKK+G+V D D + +
Sbjct: 91 -RFSDLGVMSGENSSRSSDVGG---GGSTMEKIVEKLKKYGFVDD-------DQFQDKEV 139
Query: 176 GKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK----RKE 231
+ER IE+ ++ED FYV+EG RGGFS+ESP G V EVKFPWEK K+
Sbjct: 140 EQERRIEERAVEDRFYVKEG-----RGGFSEESPFG----VFGGNEVKFPWEKVSSMEKK 190
Query: 232 EVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEK 291
E+ G W K+ SR SLAE TL ESEL RLRN+ F+TKSK R+ GAG+TQAVVD I EK
Sbjct: 191 ELVNGEWTAKK-ESRYSLAERTLSESELNRLRNVMFRTKSKMRVTGAGVTQAVVDAIQEK 249
Query: 292 WKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLY--RGVSYEVPSVQLN 349
WK+SEIVRLKIEGA ALNM+RMHEILERKTGGLVIWRSGT+++LY +G + S +N
Sbjct: 250 WKSSEIVRLKIEGASALNMRRMHEILERKTGGLVIWRSGTSIALYNYKGGNNRDGSGNMN 309
Query: 350 KRIYKRNELPASSVSQATDKQIHKQISMSVNLETASE-EQETDFV--------REVKYED 400
K+IY+R E SS+ T + SV L + E+E V EV+YED
Sbjct: 310 KQIYRRAETLQSSLPTNTS-----TVDQSVQLVHLPQLEKEPTVVGNKDRTSPHEVEYED 364
Query: 401 EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQ 460
E+ +LL+GLGPRYTDW G PLPVDAD+LPGIVP Y+PPFRVLPYGVRSTL KEAT+L+
Sbjct: 365 EINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPVYEPPFRVLPYGVRSTLGTKEATSLR 424
Query: 461 RLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKK--- 517
R+A VLPPHFALGRSRQLQGLA AM+KLW+KS IAK+ALKRGVQLTTSERM EDIK
Sbjct: 425 RIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIKVIRI 484
Query: 518 ----------LTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARL 567
LTGG LLSRNKDFLVFYRGK+FLSP+V EAL E+ERL ++LQDEEEQARL
Sbjct: 485 HIRVTFDCLILTGGMLLSRNKDFLVFYRGKSFLSPEVAEALMEKERLVRTLQDEEEQARL 544
Query: 568 RA-SAFVLPSIETIEKSG---------------------------TAGTLKETLDANSRW 599
RA SA V+PSI+ + +AGTL ETLDA +W
Sbjct: 545 RASSALVVPSIKANQNLARTLQDEEKQSRPSTLVVPSTKANQNLVSAGTLGETLDATGKW 604
Query: 600 GKRLD-DSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQ 658
GK LD D H E + +E E R A LV+KLE+KLA AE+KLL+AERAL+KVEESLKPAE++
Sbjct: 605 GKSLDNDDHVEEMKQEVERMRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQR 664
Query: 659 ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFD 718
D E IT+EERFMF+KLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL+KI+VK K+ +
Sbjct: 665 TDLEGITEEERFMFQKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKSLE 724
Query: 719 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIE 778
AKK+A+ALEAESGG+LVSVDKISKGYA++VYRGKDY+RP+TLRPKNLLTKRKALARS+E
Sbjct: 725 GAKKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLE 784
Query: 779 LQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDE 838
LQ++EAL+KH+ +++ + +LR+EIEQ+ VK GDE LYDKLD AY+++++ E +G+E
Sbjct: 785 LQKREALIKHIEAVQTRSEQLRAEIEQVELVKDKGDEALYDKLDMAYSSDEEIEETDGEE 844
Query: 839 A--YLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQ-----ESETELMDSESEAYTVH 891
YL+ Y ++ +E + E+D + + D+ ES+TE D + + T
Sbjct: 845 DDMYLDTYEDEGEDGEEGEIQAKGSLSETDVGFGSDDELWDSDESDTEFGDDSASSTTPE 904
Query: 892 STYC 895
+T+
Sbjct: 905 TTFV 908
>gi|334186525|ref|NP_193187.3| CRM family member 3B [Arabidopsis thaliana]
gi|332658053|gb|AEE83453.1| CRM family member 3B [Arabidopsis thaliana]
Length = 907
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/950 (53%), Positives = 648/950 (68%), Gaps = 109/950 (11%)
Query: 1 MALVPSRQFCP-------ATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSS 53
MA+ S FCP + DS SSF KFHGT SI L++ F +F
Sbjct: 1 MAINSSHHFCPMTTTTTTSAKFVDSLGSSFCKFHGT-------SSSISLRSYRFGFSFM- 52
Query: 54 NSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNY 113
KN R +C S+++ S+++ WN+ K N+ +P + +N
Sbjct: 53 -----KNVKRLSCEGSSSSSSSRNEN---------------WNRTQKQNQFRPSKVVLNR 92
Query: 114 RKNNVDLSALGFARTDSDGNGVGGVDDGGS--TMGKIVEKLKKFGYVGDGDGDGDGDNDE 171
RK+ S LG ++ GS TM KIVEKLKK+G+V D D +
Sbjct: 93 RKDE-RFSDLGVISGENSSRSGDVGGGSGSSSTMEKIVEKLKKYGFV-------DEDQFQ 144
Query: 172 RRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK--- 228
+ +ER IEK S+E+ FYVEE RGGFS+ESP G+ G + EVKFPWEK
Sbjct: 145 DKEVEQERRIEKSSVEERFYVEE-----RRGGFSEESPFGV---YGGNDEVKFPWEKVSS 196
Query: 229 -RKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDI 287
K+E+ G W K+ SR SLAE+TL E EL RLRN+ F+TKSK R+ GAG+TQAVVD
Sbjct: 197 MEKKELVNGEWTAKK-ESRYSLAEMTLSEFELNRLRNVMFRTKSKMRVTGAGVTQAVVDA 255
Query: 288 IHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLY--RGVSYEVPS 345
I EKWK SEIVRLKIEG+ ALNM+RMHEILERKTGGLVIWRSGT+++LY +G S S
Sbjct: 256 IQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTSIALYNYKGGSNRDGS 315
Query: 346 VQLNKRIYKRNE-----LPASSVSQATD----KQIHKQISMSVNLETASEEQETDFVREV 396
+NK++Y+R E LP S+V Q+ Q+ K+ ++ N + S + EV
Sbjct: 316 GNMNKQVYRRAERLPSSLPTSTVDQSVQLVNLPQLEKEPTVVGNKDRTSPQ-------EV 368
Query: 397 KYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEA 456
+YEDE+ +LL+GLGPRYTDW G PLPVDAD+LPGIVPGY+PPFR LPYGVRSTL KEA
Sbjct: 369 EYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPGYEPPFRALPYGVRSTLGTKEA 428
Query: 457 TNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIK 516
T+L+R+A VLPPHFALGRSRQLQGLA AM+KLW+KS IAK+ALKRGVQLTTSERM EDIK
Sbjct: 429 TSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIK 488
Query: 517 KLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRAS------ 570
+LTGG LLSRNKDFLVFYRGK+FLS +V EAL E+E L ++LQDEEEQARLRAS
Sbjct: 489 RLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEKEMLVRTLQDEEEQARLRASSALVVP 548
Query: 571 ----------------------AFVLPSIETIEKSGTAGTLKETLDANSRWGKRLD-DSH 607
A VLPS + + +AGTL ETLDA +WGK LD D H
Sbjct: 549 SIKANQQLARTLQDKEEQARPSALVLPSTKANQNLVSAGTLGETLDATGKWGKNLDNDDH 608
Query: 608 KENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDE 667
E + +E E R A LV+KLE+KLA AE+KLL+AERAL+KVEESLKPAE++ D E IT+E
Sbjct: 609 VEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEE 668
Query: 668 ERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALAL 727
ERFMF+KLGL+MKAFLLLGRRGVFDGTVENMHLHWKYREL+KI+VK KT + A+K+A+AL
Sbjct: 669 ERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMAL 728
Query: 728 EAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLK 787
EAESGG+LVSVDKISKGYA++VYRGKDY+RP+TLRPKNLLTKRKALARS+ELQ++EAL+K
Sbjct: 729 EAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREALIK 788
Query: 788 HVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYAT--EDDDSEDEGDEAYLEMYA 845
H+ +++ + +LR+EIEQ+ VK GDE LYDKLD AY++ E ++++ E D+ YL+ Y
Sbjct: 789 HIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLDMAYSSDEETEETDGEEDDVYLDTYE 848
Query: 846 GGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTYC 895
++++E + E+D + + ES+T+ D+ + + T +T+
Sbjct: 849 DEGEDDEEGGIQANGSLSETDVEFGS--DESDTDFGDNSASSTTPETTFV 896
>gi|2244807|emb|CAB10230.1| hypothetical protein [Arabidopsis thaliana]
gi|7268157|emb|CAB78493.1| hypothetical protein [Arabidopsis thaliana]
Length = 918
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/975 (52%), Positives = 640/975 (65%), Gaps = 148/975 (15%)
Query: 1 MALVPSRQFCP-------ATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSS 53
MA+ S FCP + DS SSF KFHGT SI L++ F + SS
Sbjct: 1 MAINSSHHFCPMTTTTTTSAKFVDSLGSSFCKFHGT-------SSSISLRSYRFGSSSSS 53
Query: 54 NSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNY 113
+S +E WN+ K N+ +P + +N
Sbjct: 54 SSRNEN-----------------------------------WNRTQKQNQFRPSKVVLNR 78
Query: 114 RKNNVDLSALGFARTDSDGNGVGGVDDGGS--TMGKIVEKLKKFGYVGDGDGDGDGDNDE 171
RK+ S LG ++ GS TM KIVEKLKK+G+V D D +
Sbjct: 79 RKDE-RFSDLGVISGENSSRSGDVGGGSGSSSTMEKIVEKLKKYGFV-------DEDQFQ 130
Query: 172 RRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK--- 228
+ +ER IEK S+E+ FYVEE RGGFS+ESP G+ G + EVKFPWEK
Sbjct: 131 DKEVEQERRIEKSSVEERFYVEE-----RRGGFSEESPFGV---YGGNDEVKFPWEKVSS 182
Query: 229 -RKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDI 287
K+E+ G W K+ SR SLAE+TL E EL RLRN+ F+TKSK R+ GAG+TQAVVD
Sbjct: 183 MEKKELVNGEWTAKK-ESRYSLAEMTLSEFELNRLRNVMFRTKSKMRVTGAGVTQAVVDA 241
Query: 288 IHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLY--RGVSYEVPS 345
I EKWK SEIVRLKIEG+ ALNM+RMHEILERKTGGLVIWRSGT+++LY +G S S
Sbjct: 242 IQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTSIALYNYKGGSNRDGS 301
Query: 346 VQLNKRIYKRNE-----LPASSVSQATD----KQIHKQISMSVNLETASEEQETDFVREV 396
+NK++Y+R E LP S+V Q+ Q+ K+ ++ N + S + EV
Sbjct: 302 GNMNKQVYRRAERLPSSLPTSTVDQSVQLVNLPQLEKEPTVVGNKDRTSPQ-------EV 354
Query: 397 KYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEA 456
+YEDE+ +LL+GLGPRYTDW G PLPVDAD+LPGIVPGY+PPFR LPYGVRSTL KEA
Sbjct: 355 EYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPGYEPPFRALPYGVRSTLGTKEA 414
Query: 457 TNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIK 516
T+L+R+A VLPPHFALGRSRQLQGLA AM+KLW+KS IAK+ALKRGVQLTTSERM EDIK
Sbjct: 415 TSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIK 474
Query: 517 -------------------------KLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 551
+LTGG LLSRNKDFLVFYRGK+FLS +V EAL E+
Sbjct: 475 VIRFHSRVTFNCFYINVDIIRINDKRLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEK 534
Query: 552 ERLAKSLQDEEEQARLRAS----------------------------AFVLPSIETIEKS 583
E L ++LQDEEEQARLRAS A VLPS + +
Sbjct: 535 EMLVRTLQDEEEQARLRASSALVVPSIKANQQLARTLQDKEEQARPSALVLPSTKANQNL 594
Query: 584 GTAGTLKETLDANSRWGKRLD-DSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAE 642
+AGTL ETLDA +WGK LD D H E + +E E R A LV+KLE+KLA AE+KLL+AE
Sbjct: 595 VSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAE 654
Query: 643 RALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHW 702
RAL+KVEESLKPAE++ D E IT+EERFMF+KLGL+MKAFLLLGRRGVFDGTVENMHLHW
Sbjct: 655 RALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHW 714
Query: 703 KYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLR 762
KYREL+KI+VK KT + A+K+A+ALEAESGG+LVSVDKISKGYA++VYRGKDY+RP+TLR
Sbjct: 715 KYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLR 774
Query: 763 PKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLD 822
PKNLLTKRKALARS+ELQ++EAL+KH+ +++ + +LR+EIEQ+ VK GDE LYDKLD
Sbjct: 775 PKNLLTKRKALARSLELQKREALIKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLD 834
Query: 823 SAYAT--EDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETEL 880
AY++ E ++++ E D+ YL+ Y ++++E + E+D + + ES+T+
Sbjct: 835 MAYSSDEETEETDGEEDDVYLDTYEDEGEDDEEGGIQANGSLSETDVEFGS--DESDTDF 892
Query: 881 MDSESEAYTVHSTYC 895
D+ + + T +T+
Sbjct: 893 GDNSASSTTPETTFV 907
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/851 (52%), Positives = 579/851 (68%), Gaps = 76/851 (8%)
Query: 49 QNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSS---WLVKWNKPNKYNRLK 105
++ +N+ PP + S F + S+S+ WL W+ P + RL+
Sbjct: 667 RSLPTNATLCHPPPSMAMASSPACHFRHPPRLRLLLPLSTSAPHPWLYSWSHPRQRGRLR 726
Query: 106 PPQASVNYRKNNVDLS------ALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVG 159
P A+++ R S A+G +R+ G STM I+ +L++ GY G
Sbjct: 727 APPAALDLRPEPSPSSDSDDEDAVGASRSS-----------GRSTMSLILSRLRRAGYSG 775
Query: 160 DGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSD 219
E +GS+ED+F ++G+LPNARGGF + +E +
Sbjct: 776 -----------EDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGFDAD------DEERAL 818
Query: 220 GEVKFPWEKR--KEEVAEGRWLVKRRSSR--TSLAELTLPESELRRLRNLTFQTKSKTRI 275
G+ +FPWE+ E A RS+R T +AELTLP +ELRRLR+ + KS+T++
Sbjct: 819 GDARFPWERPMPPPEAAP-------RSARSPTWMAELTLPAAELRRLRHAAIRIKSRTKV 871
Query: 276 KGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSL 335
GAG+T+ +V+ I EKWKT E+VR+K+ G PALNM+ HEILERKTGGLVIWRSGT+VSL
Sbjct: 872 GGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVSL 931
Query: 336 YRGVSYEVP-----------SVQLNKRIYKRNE---LPASSVSQATDKQIHKQISMSVNL 381
YRGV Y+ P S+ ++ I + LP + + D + +
Sbjct: 932 YRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSLLPTETANSVRDSNV-------ALV 984
Query: 382 ETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFR 441
A++E+ E+KYEDE++KLLD LGPRYTDWPG DPLPVDAD+LP +PGY+PPFR
Sbjct: 985 SNAAKEELVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANMPGYKPPFR 1044
Query: 442 VLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 501
VLPYGVR +L+R++ TNL+RLAR LPPHFALGRSRQLQGLA AM+KLWEKSSIAKIALKR
Sbjct: 1045 VLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSSIAKIALKR 1104
Query: 502 GVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 561
GVQLTTSERM EDIKKLTGG +LSRN +F+VFYRGK+FLS ++ E L ERERLAKSLQDE
Sbjct: 1105 GVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERERLAKSLQDE 1164
Query: 562 EEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHA 621
EE R AS F S ET + AGTL ETL+ANS++G + D++H + + R E RHA
Sbjct: 1165 EEARRKAASYFS--SAETYAQPTVAGTLGETLEANSKYGTKHDENHADKMARTIEAARHA 1222
Query: 622 YLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKA 681
LV+KLE KL+ A++K+ +AER L KVE +L+P E PE+ITDEERFMFRKLGLRMKA
Sbjct: 1223 DLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKA 1282
Query: 682 FLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 741
FLLLGRRGVFDGT+ENMHLHWKYRELVKI+VK K+F K+IAL+LEAESGG+LVSVDK+
Sbjct: 1283 FLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKV 1342
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRS 801
SKGYA+VV+RGK+Y+RPS+LRP+NLL+KRKALARSIELQR +AL +H A L RL++
Sbjct: 1343 SKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKA 1402
Query: 802 EIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMY----AGGNDNEDEIDNS 857
E+ QM VK GDE+LY KLD+AY+++D+D EDE DEAYL+ + AG ++D D+
Sbjct: 1403 ELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRFDNEVAGATADDDGSDDY 1462
Query: 858 THNLEMESDFP 868
T + E+D+P
Sbjct: 1463 TSAAD-EADYP 1472
>gi|162459980|ref|NP_001106061.1| CRM family member 3 [Zea mays]
gi|156789080|gb|ABU96081.1| CRM family member 3 [Zea mays]
Length = 842
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/806 (54%), Positives = 564/806 (69%), Gaps = 73/806 (9%)
Query: 91 WLVKWNKPNKYNRLKPPQASVNYRKNNVDLS------ALGFARTDSDGNGVGGVDDGGST 144
WL W+ P + RL+ P A+++ R S A+G +R+ G ST
Sbjct: 31 WLYSWSHPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGASRSS-----------GRST 79
Query: 145 MGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGF 204
M I+ +L++ GY G E +GS+ED+F ++G+LPNARGGF
Sbjct: 80 MSLILSRLRRAGYSG-----------EDPRAAAPPHPPRGSVEDVFRADDGVLPNARGGF 128
Query: 205 SKESPLGLGEEVGSDGEVKFPWEKR--KEEVAEGRWLVKRRSSR--TSLAELTLPESELR 260
+ +E + G+ +FPWE+ E A RS+R T +AELTLP +ELR
Sbjct: 129 DAD------DEERALGDARFPWERPMPPPEAAP-------RSARSPTWMAELTLPAAELR 175
Query: 261 RLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERK 320
RLR+ + KS+T++ GAG+T+ +V+ I EKWKT E+VR+K+ G PALNM+ HEILERK
Sbjct: 176 RLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERK 235
Query: 321 TGGLVIWRSGTAVSLYRGVSYEVP-----------SVQLNKRIYKRNE---LPASSVSQA 366
TGGLVIWRSGT+VSLYRGV Y+ P S+ ++ I + LP + +
Sbjct: 236 TGGLVIWRSGTSVSLYRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSLLPTETANSV 295
Query: 367 TDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDA 426
D + + A++E+ E+KYEDE++KLLD LGPRYTDWPG DPLPVDA
Sbjct: 296 RDSNV-------ALVSNAAKEELVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDA 348
Query: 427 DMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMI 486
D+LP +PGY+PPFRVLPYGVR +L+R++ TNL+RLAR LPPHFALGRSRQLQGLA AM+
Sbjct: 349 DLLPANMPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLANAMV 408
Query: 487 KLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTE 546
KLWEKSSIAKIALKRGVQLTTSERM EDIKKLTGG +LSRN +F+VFYRGK+FLS ++ E
Sbjct: 409 KLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAE 468
Query: 547 ALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDS 606
L ERERLAKSLQDEEE R AS F S ET + AGTL ETL+ANS++G + D++
Sbjct: 469 VLLERERLAKSLQDEEEARRKAASYFS--SAETYAQPTVAGTLGETLEANSKYGTKHDEN 526
Query: 607 HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITD 666
H + + R E RHA LV+KLE KL+ A++K+ +AER L KVE +L+P E PE+ITD
Sbjct: 527 HADKMARTIEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITD 586
Query: 667 EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALA 726
EERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VK K+F K+IAL+
Sbjct: 587 EERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALS 646
Query: 727 LEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
LEAESGG+LVSVDK+SKGYA+VV+RGK+Y+RPS+LRP+NLL+KRKALARSIELQR +AL
Sbjct: 647 LEAESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALS 706
Query: 787 KHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMY-- 844
+H A L RL++E+ QM VK GDE+LY KLD+AY+++D+D EDE DEAYL+ +
Sbjct: 707 RHFAKLNRKVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRFDN 766
Query: 845 --AGGNDNEDEIDNSTHNLEMESDFP 868
AG ++D D+ T + E+D+P
Sbjct: 767 EVAGATADDDGSDDYTSAAD-EADYP 791
>gi|326492672|dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/821 (53%), Positives = 556/821 (67%), Gaps = 49/821 (5%)
Query: 86 CSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGG-ST 144
C+ WL W++P + L+PP +++ R S D + VG G ST
Sbjct: 43 CAQYPWLSAWSRPRRG--LRPPAPALDLRPEPSPTSG------SDDEDAVGTSRHSGRST 94
Query: 145 MGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGF 204
M I+ +LK+ GY + + R +GS+ED+F ++G+LPNARGGF
Sbjct: 95 MSLILHRLKRAGYSLEAQIPPSTFSQHPR---------RGSVEDVFRADDGVLPNARGGF 145
Query: 205 SKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRN 264
++ L + +FPWE+ + S +AELTLPE ELRRLR+
Sbjct: 146 DDDAESSLMD-------ARFPWERPMPPPEA---AARAARSPAWMAELTLPEPELRRLRH 195
Query: 265 LTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGL 324
+ KSKT++ GAG+T+ +V I EKW+T E+VR+K+ G PALNM+ HEILERKTGGL
Sbjct: 196 AAMRIKSKTQVGGAGVTREIVAKIKEKWRTDEVVRVKVNGTPALNMRLFHEILERKTGGL 255
Query: 325 VIWRSGTAVSLYRGVSYEVPSVQLN----------KRIYKRNELPASSVSQATDKQIHKQ 374
VIWRSGT+VSLYRGV+Y+VP K K +P+S ++ +
Sbjct: 256 VIWRSGTSVSLYRGVAYDVPDTTKGTNRTWQDVGMKSSIKGPPIPSSIPNEKVNSMQGSN 315
Query: 375 ISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVP 434
+ N E +E+ + V E+KYE+E+ +LLD LGPRY+DWPG +PLPVDAD+LP +P
Sbjct: 316 GGLVSNTE---KEEAIETVPEIKYEEEIGRLLDELGPRYSDWPGSNPLPVDADLLPATIP 372
Query: 435 GYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSI 494
GY+PPFRVLPYGVR +L+RK+ TNL+RLAR LPPHFALGRSRQLQGLA AM+KLWE+SSI
Sbjct: 373 GYKPPFRVLPYGVRRSLSRKDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWERSSI 432
Query: 495 AKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERL 554
AK+ALKRGVQLTTSERM EDIKKLTGG +LSRN DF+VFYRGK+FLS ++ EAL ERER
Sbjct: 433 AKVALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFVVFYRGKDFLSTELAEALLERERS 492
Query: 555 AKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVRE 614
KSLQDEE QARL A S E +S AGTL ETL+ANS++G L D+H + + R
Sbjct: 493 MKSLQDEE-QARLNAKLSFTSSTEAFIESTVAGTLGETLEANSKYGNELVDNHVDKMTRT 551
Query: 615 AEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRK 674
E +HA LV+KLE KLA AE+++ +AER L KVE +LKP E PE+ITDEERFMFRK
Sbjct: 552 VEAAKHADLVRKLEWKLALAEKRIAKAERVLGKVETALKPTEDTKPPETITDEERFMFRK 611
Query: 675 LGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGV 734
LGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VK K+F K+ AL+LE ESGGV
Sbjct: 612 LGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRTALSLEVESGGV 671
Query: 735 LVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLES 794
LVSVDK+SKGYA+VV+RGKDY+RPS LRP+NLL+KRKALARSIELQR EAL +H+ L
Sbjct: 672 LVSVDKVSKGYAIVVFRGKDYKRPSMLRPRNLLSKRKALARSIELQRMEALGRHIEKLNR 731
Query: 795 NAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMY-------AGG 847
+LRSE+ QM VK GDE+LY KLDSAY++ED+D EDE D+AY+ +
Sbjct: 732 RVNQLRSELVQMEDVKDQGDEELYAKLDSAYSSEDEDVEDEDDDAYIRSFDNPIARATAD 791
Query: 848 NDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAY 888
++NE I++S + + D D + E E+ D E Y
Sbjct: 792 DENETAIEDSESSYSNDYDSAEDNGDCDEEDEVNDVEYSDY 832
>gi|242071513|ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
gi|241936876|gb|EES10021.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
Length = 895
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/802 (53%), Positives = 558/802 (69%), Gaps = 63/802 (7%)
Query: 91 WLVKWNKPNKYNRLK---PPQASVNYRKNNVDLS------ALGFARTDSDGNGVGGVDDG 141
WL W+ P + +R + PP +++ R S A+G +R+ G
Sbjct: 31 WLSAWSHPGQRSRSRLRAPPPPALDLRPEPSPSSDSDDEDAVGTSRSS-----------G 79
Query: 142 GSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNAR 201
STM I+ +L++ GY D R +GS+ED+F ++G+LPNAR
Sbjct: 80 RSTMSLILSRLRRAGY--------SPAEDPRAAAASSHHPPRGSVEDVFRADDGVLPNAR 131
Query: 202 GGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRR 261
GGF EE+G + +FPWE+ R S T +AELTLP +ELRR
Sbjct: 132 GGFD-----AADEELG---DARFPWERPMPPPEAAPPRATR--SPTWMAELTLPAAELRR 181
Query: 262 LRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKT 321
LR+ + KS+T++ GAG+T+ +V+ I EKWKT E+VR+K+ G PALNM+ HEILERKT
Sbjct: 182 LRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKT 241
Query: 322 GGLVIWRSGTAVSLYRGVSYEVP-----------SVQLNKRIYKRNELPASSVSQATDKQ 370
GGLVIWRSGT+VSLYRGV Y+ P S+ + I P +A Q
Sbjct: 242 GGLVIWRSGTSVSLYRGVDYDEPETTKGSKKNSQSLSMKSPIKGSPNPPLPPTEKANSVQ 301
Query: 371 IHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLP 430
+S A +E+ E+KYEDE++KLLD LGPRYTDWPG DPLPVDAD+LP
Sbjct: 302 DRNGPLVS----NAGKEEIVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLP 357
Query: 431 GIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWE 490
VPGY+PPFRVLPYGVR +L+R + TNL+RLAR LPPHFALGRSRQLQGLA AM+KLWE
Sbjct: 358 ATVPGYKPPFRVLPYGVRPSLSRMDTTNLRRLARGLPPHFALGRSRQLQGLANAMVKLWE 417
Query: 491 KSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQE 550
KSSIAK+ALKRGVQLTTSERM EDIKKLTGG +LSRN +F+VFYRGK+FLS ++ E L E
Sbjct: 418 KSSIAKVALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLE 477
Query: 551 RERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKEN 610
RERLAKSLQDEEE AR +A+++ S E + AGTL ETL+ANS++G +LD++H++
Sbjct: 478 RERLAKSLQDEEE-ARRKAASYFSSSAEKYVQPTVAGTLGETLEANSKYGTKLDENHEDK 536
Query: 611 LVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERF 670
+ R E RHA LV+KLE KL+ A++K+ +AER L KVE +L+P E + PE+ITDEERF
Sbjct: 537 MARTVEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTE-DSRPETITDEERF 595
Query: 671 MFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAE 730
MFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VK K+F K+IAL+LEAE
Sbjct: 596 MFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAE 655
Query: 731 SGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVA 790
SGG+LVSVDK+SKGYA+VV+RGK+Y+RPS+LRP+NLL+KRKALARSIELQR +AL +H A
Sbjct: 656 SGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFA 715
Query: 791 TLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYAT-EDDDSEDEGDEAYLEMYAGGND 849
L +L++E+ QM VK GDE+LY KLD+AY++ E+D +++ DEAYLE + D
Sbjct: 716 KLNRKVAQLKAELVQMEDVKDQGDEELYAKLDAAYSSDEEDMEDEDDDEAYLERF----D 771
Query: 850 NE---DEIDNSTHNLEMESDFP 868
NE ++ + +++ E+D+P
Sbjct: 772 NEVAGATAEDGSESVDDEADYP 793
>gi|357156286|ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 881
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/774 (54%), Positives = 546/774 (70%), Gaps = 39/774 (5%)
Query: 91 WLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDSDG-NGVGGVDDGG-STMGKI 148
WL W++P + L+PP +++ R S DSD + VG G STM I
Sbjct: 32 WLSAWSRPRRG--LRPPAPALDLRPEPSPTS-------DSDEEDSVGTSRHAGRSTMSLI 82
Query: 149 VEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKES 208
+ +L++ GY + R ++GS+ED+F ++G+LPNARGGF ++
Sbjct: 83 LRRLQRAGYSPEPQAA--------HAATASRHPQRGSVEDVFRADDGVLPNARGGFDDDA 134
Query: 209 PLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQ 268
L + +FPWE+ + + S +AELTLPE+ELRRLR+ T +
Sbjct: 135 ESSLVD-------ARFPWER---PMPPPEAAARATKSPVWMAELTLPEAELRRLRHATMR 184
Query: 269 TKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWR 328
KS+ ++ GAG+T+ +V I EKWKT E+VR+K+ G PALNM+ HEILERKTGGLVIWR
Sbjct: 185 IKSRIQVGGAGVTREIVAKIKEKWKTDEVVRVKVSGTPALNMRLFHEILERKTGGLVIWR 244
Query: 329 SGTAVSLYRGVSYEVP-SVQLNKRIYK------RNELPASSVSQATDKQIHKQISMSVNL 381
SGT+VSLYRGV+Y+VP + + R ++ +P S +K Q + +
Sbjct: 245 SGTSVSLYRGVAYDVPETTKGTNRNWQALGMKSSINIPPMPSSLPNEKVNGMQDRVGALV 304
Query: 382 ETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFR 441
E+ + V E+KYE+E+++LLD LGPRY+DWPG +PLPVDAD+LP VPGY+PPFR
Sbjct: 305 AVTENEETAETVPEIKYEEEIDRLLDELGPRYSDWPGSNPLPVDADLLPATVPGYKPPFR 364
Query: 442 VLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 501
VLPYGVR +L+RK+ TNL+RL R LPPHFALGRSRQLQGLA AM+KLWE+SSIAKIALKR
Sbjct: 365 VLPYGVRRSLSRKDTTNLRRLGRGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKIALKR 424
Query: 502 GVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 561
GVQLTTSERM ED+KKLTGG +LSRN DF+VFYRGK+FLS ++ E L ERER KSLQDE
Sbjct: 425 GVQLTTSERMAEDLKKLTGGVMLSRNNDFVVFYRGKDFLSSELAEVLLERERSMKSLQDE 484
Query: 562 EEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHA 621
E QARL + S E + AGTL+ETL+ANS++G ++D++H + + + E +HA
Sbjct: 485 E-QARLDRTPSFASSTEAFIEPSVAGTLEETLEANSKYGNKVDENHMDKMTKTVEAAKHA 543
Query: 622 YLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKA 681
+V+KLE KL+ AE+++ +AER L KVE +LKP+E E+IT+EERFMFRKLGLRMKA
Sbjct: 544 DVVRKLEWKLSLAEKRIAKAERVLGKVETALKPSEDTNPHETITEEERFMFRKLGLRMKA 603
Query: 682 FLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 741
FLLLGRRGVFDGT+ENMHLHWKYRELVKI+VKVK+F + K+IAL+LE ESGG+LVSVDK+
Sbjct: 604 FLLLGRRGVFDGTIENMHLHWKYRELVKILVKVKSFTEVKRIALSLEVESGGILVSVDKV 663
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRS 801
SKGYA+VV+RGKDY+RPS LRP+NLL+KRKALARSIE+QR +AL +H+ L +LRS
Sbjct: 664 SKGYAIVVFRGKDYRRPSMLRPRNLLSKRKALARSIEIQRMQALNRHIGKLNRRVNQLRS 723
Query: 802 EIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMY--AGGNDNEDE 853
E+ Q+ K GD +LY KLDSAY++ED+D EDE DEAYL + A G D D+
Sbjct: 724 ELVQIEGAKDQGDVELYAKLDSAYSSEDEDVEDEDDEAYLRSFDSAVGRDTTDD 777
>gi|77551737|gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 886
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/681 (59%), Positives = 506/681 (74%), Gaps = 24/681 (3%)
Query: 184 GSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRR 243
GS+ED+F V++G++PNARGGF ++ L + +FPWE G +
Sbjct: 116 GSVEDVFRVDDGVVPNARGGFDDDAESALVD-------ARFPWELPMPPPEAGPRAAR-- 166
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ +AELTLPE+ELRRLR+ + KS+ ++ GAG+T+ +V+ I ++W+ E+VR+K+
Sbjct: 167 -SKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRIKVT 225
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP--------SVQLNKRIYKR 355
G PALNM+ HEILERKTGGLVIWRSGT+VSLYRGV+Y++P + Q
Sbjct: 226 GTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKNTQTLGMKSSI 285
Query: 356 NELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTD 415
E P S+ +K Q + + A ++ + V E+KYEDE++KLLD LGPRY D
Sbjct: 286 KEPPGHSL-LPNEKVNEMQDNNGALVSNAEKDTLVEPVPEIKYEDEIDKLLDELGPRYDD 344
Query: 416 WPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRS 475
WP DP PVDAD+LP VPGY+PPFRVLPYGVR +L+R++ TNL+RLAR LPPHFALGRS
Sbjct: 345 WPRPDPSPVDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRS 404
Query: 476 RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYR 535
RQLQGLA AM+KLWEKSSIAKIALKRGVQLTTSERM EDIKKLTGG +LSRN DF+VFYR
Sbjct: 405 RQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFMVFYR 464
Query: 536 GKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDA 595
GK+FLSP++ E L ERER AKSLQDEE QARL A++ E + AGTL ETL+A
Sbjct: 465 GKDFLSPELAEKLLERERWAKSLQDEE-QARLNAASSFSSRTEAPVEPTVAGTLGETLEA 523
Query: 596 NSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPA 655
NS++G +LD++++ + R E RHA LV+KLE KL A++K+ +AER L KVE +LKP
Sbjct: 524 NSKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPT 583
Query: 656 ERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVK 715
E PE+ITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VK K
Sbjct: 584 EGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAK 643
Query: 716 TFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALAR 775
+F KKIAL+LEAESGG+LVSVDK+SKGYA+VV+RGKDY RPS LRP+NLL+KRKALAR
Sbjct: 644 SFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALAR 703
Query: 776 SIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDE 835
SIE+QR+EAL H+ATL +L++E+ QM VK GD +LY KLDSAY+++++D EDE
Sbjct: 704 SIEIQRREALSHHIATLNRRVKKLKAELLQMEGVKEEGDVELYAKLDSAYSSDEEDVEDE 763
Query: 836 GDEAYLEMYAGGNDNEDEIDN 856
DEAYL + DN + N
Sbjct: 764 DDEAYLRSF----DNSVAVQN 780
>gi|110742047|dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]
Length = 717
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/719 (55%), Positives = 495/719 (68%), Gaps = 59/719 (8%)
Query: 1 MALVPSRQFCPATA---IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAH 57
MA+ PS FCP T SFQSSF F F R SI L +
Sbjct: 1 MAMKPSLHFCPTTVTKKFVYSFQSSFC------FRFLRYSSSISLGSC------------ 42
Query: 58 EKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNN 117
K +FS+ N + + C++ WL WN+ K N+ KPP+ VNYRK
Sbjct: 43 ------KGVTFSSRNDQIASRRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEG 96
Query: 118 VDLSALGFARTD-SDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQG 176
F+ ++ G+ D GSTM KIVEKLKK+GY+ + + +
Sbjct: 97 ------RFSGSEIVSGDDNRSRDGDGSTMEKIVEKLKKYGYM---------EEVQNKEIE 141
Query: 177 KERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEK---RKEEV 233
+ER IEKGS+EDIFYVEEG LPN RGGF++ES LG +GS+G+V FPWEK ++++
Sbjct: 142 QERRIEKGSVEDIFYVEEGKLPNTRGGFTEESLLGGENVIGSNGDVGFPWEKMSAKEKKE 201
Query: 234 AEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWK 293
E W K+ +R SLAE+TLPESELRRLRNLTF+T SK RI+G G+TQ VD I EKWK
Sbjct: 202 LEAEWTAKK-ENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWK 260
Query: 294 TSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIY 353
++EIVRLKIEGA ALNM++MHEILE+KTGGLVIWRSGT++SLYRGVSYE+PS + NK+
Sbjct: 261 SAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQ-- 318
Query: 354 KRNELPASSV-------SQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLL 406
+R E P +V + DK K + ET S E++ V+YEDE+++LL
Sbjct: 319 RREETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELL 378
Query: 407 DGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVL 466
D LGPR+ DWPG +PLPVDAD+LPG +P Y+PPFRVLPYGVRS+L KEAT L+RLAR +
Sbjct: 379 DDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSI 438
Query: 467 PPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR 526
PPHFALGRSRQLQGLA AM++LWEKS +AKIA+KRGVQ TTSERM ED+KKLTGG +LSR
Sbjct: 439 PPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSR 498
Query: 527 NKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR-ASAFVLPSIETIEKSGT 585
NKDFLVFYRGKNFLS +V +AL E+ER ++LQDEEEQARLR +SA ++PS E K +
Sbjct: 499 NKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVS 558
Query: 586 AGTLKETLDANSRWGKRL-DDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERA 644
AGTL ETLDA +WGK L DD H + + +E E+ RH LV+KLE+KLA AERKLL+AER
Sbjct: 559 AGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERG 618
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWK 703
L+KVE LKPAE++ DPESITDEERFMFRKLGL+MKAFLLLG +F ++ H+K
Sbjct: 619 LAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGFAPIFPDICYHL-THYK 676
>gi|222616258|gb|EEE52390.1| hypothetical protein OsJ_34482 [Oryza sativa Japonica Group]
Length = 560
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/550 (63%), Positives = 429/550 (78%), Gaps = 10/550 (1%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
S+ +AELTLPE+ELRRLR+ + KS+ ++ GAG+T+ +V+ I ++W+ E+VR+K+ G
Sbjct: 13 SKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRIKVTG 72
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP--------SVQLNKRIYKRN 356
PALNM+ HEILERKTGGLVIWRSGT+VSLYRGV+Y++P + Q
Sbjct: 73 TPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKNTQTLGMKSSIK 132
Query: 357 ELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDW 416
E P S+ +K Q + + A ++ + V E+KYEDE++KLLD LGPRY DW
Sbjct: 133 EPPGHSL-LPNEKVNEMQDNNGALVSNAEKDTLVEPVPEIKYEDEIDKLLDELGPRYDDW 191
Query: 417 PGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSR 476
P DP PVDAD+LP VPGY+PPFRVLPYGVR +L+R++ TNL+RLAR LPPHFALGRSR
Sbjct: 192 PRPDPSPVDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSR 251
Query: 477 QLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
QLQGLA AM+KLWEKSSIAKIALKRGVQLTTSERM EDIKKLTGG +LSRN DF+VFYRG
Sbjct: 252 QLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNDFMVFYRG 311
Query: 537 KNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDAN 596
K+FLSP++ E L ERER AKSLQDEE QARL A++ E + AGTL ETL+AN
Sbjct: 312 KDFLSPELAEKLLERERWAKSLQDEE-QARLNAASSFSSRTEAPVEPTVAGTLGETLEAN 370
Query: 597 SRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAE 656
S++G +LD++++ + R E RHA LV+KLE KL A++K+ +AER L KVE +LKP E
Sbjct: 371 SKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTE 430
Query: 657 RQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKT 716
PE+ITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVKI+VK K+
Sbjct: 431 GIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKS 490
Query: 717 FDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARS 776
F KKIAL+LEAESGG+LVSVDK+SKGYA+VV+RGKDY RPS LRP+NLL+KRKALARS
Sbjct: 491 FGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARS 550
Query: 777 IELQRQEALL 786
IE+QR+E L
Sbjct: 551 IEIQRREVLF 560
>gi|359484307|ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/655 (53%), Positives = 463/655 (70%), Gaps = 15/655 (2%)
Query: 217 GSDGEVKFPWEKRK--EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTR 274
G+ ++ PW++R+ + V W RR++R +AE +PE ELRRL+N+ + + +
Sbjct: 232 GNSSLIELPWKRREGLQPVERDGW--GRRNTR--MAERMVPEHELRRLKNIALRMLERIK 287
Query: 275 IKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVS 334
+ AG+TQ++VD IHEKW+ E+V+LK EG + NMKR HEILE +TGGLVIWR+G++V
Sbjct: 288 VGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVV 347
Query: 335 LYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASE--EQETDF 392
LYRG++Y++ VQ + +R+ + S SQ I + I + ++T +
Sbjct: 348 LYRGMAYKLHCVQSYIK-QERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARY 406
Query: 393 VREVKYED-----EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGV 447
++++ E+ E+ LLD LGPR+ DW G +PLPVDAD+LP +V Y+PPFR+LPYG+
Sbjct: 407 LKDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGM 466
Query: 448 RSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTT 507
R L +E T ++RLAR +PPHFALGRSR+LQGLA+AM+KLWE+S+IAKIA+KRGVQ T
Sbjct: 467 RHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTC 526
Query: 508 SERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARL 567
++RM E++K LTGGTL+SRNKD++VFYRG +FL P V EAL+ER +L QDEEEQAR
Sbjct: 527 NDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARH 586
Query: 568 RASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKL 627
RASA + + + AGTL ETL A SRWG + ++R++ + RHA LV+ +
Sbjct: 587 RASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYV 646
Query: 628 EKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGR 687
KKLA A+ KL + E+AL KV+E L+PAE D E+++DEERF+FRK+GL MK FLLLG
Sbjct: 647 GKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGT 706
Query: 688 RGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAM 747
RG+FDGTVENMHLHWKYRELVKIIVK K F Q K IA++LEAESGGVLVSVD+ KGYA+
Sbjct: 707 RGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAI 766
Query: 748 VVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
+VYRGK+YQRP LRPKNLLTKR+ALARSIELQR EAL H++ LE L+S E+M
Sbjct: 767 IVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMK 826
Query: 808 SVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLE 862
+ G D+ Y +LD Y+T++D EDEG+EAYLE+Y G D I N LE
Sbjct: 827 TGNGIDDKAFYSRLDGTYSTDEDMEEDEGEEAYLEIY-GSEDKGSNIQNKELLLE 880
>gi|297738658|emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/655 (53%), Positives = 463/655 (70%), Gaps = 15/655 (2%)
Query: 217 GSDGEVKFPWEKRK--EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTR 274
G+ ++ PW++R+ + V W RR++R +AE +PE ELRRL+N+ + + +
Sbjct: 229 GNSSLIELPWKRREGLQPVERDGW--GRRNTR--MAERMVPEHELRRLKNIALRMLERIK 284
Query: 275 IKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVS 334
+ AG+TQ++VD IHEKW+ E+V+LK EG + NMKR HEILE +TGGLVIWR+G++V
Sbjct: 285 VGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVV 344
Query: 335 LYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASE--EQETDF 392
LYRG++Y++ VQ + +R+ + S SQ I + I + ++T +
Sbjct: 345 LYRGMAYKLHCVQSYIK-QERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDSARY 403
Query: 393 VREVKYED-----EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGV 447
++++ E+ E+ LLD LGPR+ DW G +PLPVDAD+LP +V Y+PPFR+LPYG+
Sbjct: 404 LKDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGM 463
Query: 448 RSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTT 507
R L +E T ++RLAR +PPHFALGRSR+LQGLA+AM+KLWE+S+IAKIA+KRGVQ T
Sbjct: 464 RHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTC 523
Query: 508 SERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARL 567
++RM E++K LTGGTL+SRNKD++VFYRG +FL P V EAL+ER +L QDEEEQAR
Sbjct: 524 NDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARH 583
Query: 568 RASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKL 627
RASA + + + AGTL ETL A SRWG + ++R++ + RHA LV+ +
Sbjct: 584 RASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYV 643
Query: 628 EKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGR 687
KKLA A+ KL + E+AL KV+E L+PAE D E+++DEERF+FRK+GL MK FLLLG
Sbjct: 644 GKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGT 703
Query: 688 RGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAM 747
RG+FDGTVENMHLHWKYRELVKIIVK K F Q K IA++LEAESGGVLVSVD+ KGYA+
Sbjct: 704 RGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAI 763
Query: 748 VVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
+VYRGK+YQRP LRPKNLLTKR+ALARSIELQR EAL H++ LE L+S E+M
Sbjct: 764 IVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMK 823
Query: 808 SVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLE 862
+ G D+ Y +LD Y+T++D EDEG+EAYLE+Y G D I N LE
Sbjct: 824 TGNGIDDKAFYSRLDGTYSTDEDMEEDEGEEAYLEIY-GSEDKGSNIQNKELLLE 877
>gi|115478793|ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
gi|50726191|dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|125591023|gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
Length = 947
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 316/634 (49%), Positives = 440/634 (69%), Gaps = 24/634 (3%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
G V PWE+ EG R+ S T LAE T+PE ELRRLR++ + K + R+ G
Sbjct: 313 GPVLLPWER------EGDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERMRVGPGG 366
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
+TQ +V+ IH+KW+ E+V+L+ EG P+LNMKR H+ILE +TGG+VIWRSG +V LYRG+
Sbjct: 367 VTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVLYRGM 426
Query: 340 SYEVPSVQ---------LNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQET 390
+Y + VQ +KR+ N + V K ++ S + +SE+
Sbjct: 427 NYNLRCVQSYTQTTEVNFDKRV-SSNSVEPIHVEHKFQKSGADGLNRSAYIVNSSEKPTE 485
Query: 391 DFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRST 450
F +++ LD LGPRY DW G P+PVDAD+LPG+VPGY+ PFR+LPY V+ST
Sbjct: 486 TF--------DIDSFLDQLGPRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLPYMVKST 537
Query: 451 LARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSER 510
L KE T L+RLAR PHFALGR+R+ QGLA A++KLWEKSSIAKIA+KRGV T ++R
Sbjct: 538 LRNKEMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDR 597
Query: 511 MVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRAS 570
M E+I+KLTGG LLSRNK+++VFYRG +F++P V + L E++ A + QDEEE ARL+AS
Sbjct: 598 MAEEIRKLTGGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKAS 657
Query: 571 AFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKK 630
A + + + AGTL ET +A SRWG ++ ++ + +H L++ L++K
Sbjct: 658 ASISVKPKVFKNPPVAGTLAETREAKSRWGDSINAELRKKEKNHMILTKHTSLLRNLKRK 717
Query: 631 LARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGV 690
L A+ K+++AE+AL+KV+E L PAE D E++TDEERF+ R++GL+MKAFL+LGRR V
Sbjct: 718 LILAKTKVIKAEKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREV 777
Query: 691 FDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVY 750
FDGTV+NMHLHWK+RELVK++VK K+F Q K IA++LEAESGGVL+SVDK +KGYA+++Y
Sbjct: 778 FDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILY 837
Query: 751 RGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVK 810
RGK+Y+ P L+P+NLL++RKALARSIELQR+E L H++ L +L+S++ +M
Sbjct: 838 RGKNYKTPQILKPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKLKSQLVRMQVAG 897
Query: 811 GTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMY 844
D +L +++ + +DD EDEG+EAYL+ Y
Sbjct: 898 EKPDAELLQTVEADLSKDDDKIEDEGEEAYLQTY 931
>gi|224091282|ref|XP_002309217.1| predicted protein [Populus trichocarpa]
gi|222855193|gb|EEE92740.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 338/686 (49%), Positives = 451/686 (65%), Gaps = 42/686 (6%)
Query: 160 DGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEV--- 216
DGD DGD N E G E S +D N +K+ LG E V
Sbjct: 277 DGD-DGDFGNIEVCNDGHCDSFENLSCKD---------SNGVVSVTKKQ-LGDFENVEVS 325
Query: 217 --GSDGEVKFPWEKRK--EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSK 272
G + PW++ + + E + R+ S T LAE LPE EL+RLRN+ + +
Sbjct: 326 NNGVSNSNELPWKRTSGLDSLGEDK---SRKKSNTDLAERMLPEHELKRLRNVALRMLER 382
Query: 273 TRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTA 332
++ G+TQ +VD IHEKWK E+V+LK E + NMKR HEILE +TGGL+IWRSG++
Sbjct: 383 IKVGATGITQDLVDAIHEKWKLDEVVKLKFEWPLSCNMKRTHEILESRTGGLIIWRSGSS 442
Query: 333 VSLYRGVSYEVPSVQLNKR--------IYKRNELPASSVSQATDKQIHKQISMSVN---- 380
V +YRG +Y+ VQ + + E S+ S A K + + + +
Sbjct: 443 VVMYRGTTYKFQCVQSYTKQNEAGMDVLQYAEEATNSATSSAGMKDLARTMESIIPDAAK 502
Query: 381 -LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPP 439
L+ S+E+ DF E+ LLD LGPRY DW G +PLPVDAD+LP +VPGY+ P
Sbjct: 503 YLKDLSQEELMDF-------SELNHLLDELGPRYKDWCGREPLPVDADLLPAVVPGYKSP 555
Query: 440 FRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIAL 499
R+LPYGV+ L+ K TN +RLAR PPHF LGR+R+LQGLA AM+KLWE+S+IAKIA+
Sbjct: 556 LRLLPYGVKPCLSNKNTTNFRRLARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAI 615
Query: 500 KRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQ 559
KRGVQ T +E M E++K+LTGGTLLSRNK+++VFYRG +FL P + E L+ER +LA Q
Sbjct: 616 KRGVQYTRNEIMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPVINETLKERRKLAFLYQ 675
Query: 560 DEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRR 619
DEE+QAR SAF+ S++T + AGTL ET+ A SRWG + E ++R++ + R
Sbjct: 676 DEEDQARQMTSAFIGSSVKTTKGPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALAR 735
Query: 620 HAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRM 679
HA LV+ LE KLA+A+ KL ++E+ L+KV+E+L+P E D E+I+DEERF+FRK+GL M
Sbjct: 736 HASLVKHLENKLAQAKGKLKKSEKDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSM 795
Query: 680 KAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVD 739
K +L LGRRGVFDGT+ENMHLHWKYRELVKIIV+ K Q K IA++LEAESGGVLVSVD
Sbjct: 796 KPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVD 855
Query: 740 KISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 799
+ +KGYA++VYRGK+Y RP +RP+NLLT+R+ALARS+ELQR EAL H+ L+ +
Sbjct: 856 RTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQALARSVELQRYEALKHHITDLQERIELV 915
Query: 800 RSEIEQMNSVKGTGD-EQLYDKLDSA 824
SE+E+M + K + + LY K D A
Sbjct: 916 TSELEEMEADKKSEVYKALYSKFDDA 941
>gi|242044486|ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 337/694 (48%), Positives = 471/694 (67%), Gaps = 27/694 (3%)
Query: 178 ERVIEKGSIEDIFYVEEGLL----PNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEE- 232
+R + +GS+ I G + PNA S V G V PWE+ +E+
Sbjct: 278 DRSMRQGSVNTIVKTLRGSMEESDPNAAIELSNAEDF-----VQKLGPVLLPWEREEEDD 332
Query: 233 --VAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 290
+ GR V RRS+ T LAE T+PE ELRRLR+ + K + ++ G+TQ +V+ IH
Sbjct: 333 EAFSGGR--VGRRSN-TELAERTIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHR 389
Query: 291 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ--- 347
KWK E+V+++ EG P+LNMKR H++LE +TGG+VIWRSG +V LYRG++Y + VQ
Sbjct: 390 KWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLYRGMNYNLQCVQSYA 449
Query: 348 --LNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKL 405
+ K + +S+VS + T++E +F E +++
Sbjct: 450 KSIETDSGKEVDDASSAVSSHGGHNLQDSREAGAKRLTSTE----NFSLESSETFDIDNF 505
Query: 406 LDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARV 465
LD LGPRY DW G P+PVDAD+LPG+V GY+PPFRVLPY ++STL KE T L+RL+R
Sbjct: 506 LDQLGPRYRDWSGRGPVPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDKEMTTLRRLSRQ 565
Query: 466 LPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS 525
PHFALGR+R+ QGLA AM+KLWEKS+IAKIA+KRGV T ++RM E+IKKLTGG LLS
Sbjct: 566 TAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDRMAEEIKKLTGGVLLS 625
Query: 526 RNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGT 585
RNK+++VFYRG +F++P V + L E++ A + QDEEE ARL+ASA ++ + I+
Sbjct: 626 RNKEYIVFYRGNDFIAPKVRQVLVEKQEQAITQQDEEELARLKASASIITVPKGIKGPLV 685
Query: 586 AGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERAL 645
AGTL ET +A SRWG L+D +E ++ + +H L++ L++KL A+ K+ +AERAL
Sbjct: 686 AGTLTETTEAKSRWGMSLNDKQREEEMKRLSLLKHTSLLKNLKRKLILAKTKVAKAERAL 745
Query: 646 SKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYR 705
+KV+E L PAE D E++TDEERF+FR++GL+M+AFL+LGRR VFDGTV+NMHLHWK+R
Sbjct: 746 AKVQEFLSPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWKHR 805
Query: 706 ELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKN 765
ELVKIIV+ K+F Q K IA++LEAES GVL+S+DK SKGYA++ YRGK+Y+RP ++P+N
Sbjct: 806 ELVKIIVRGKSFAQVKHIAISLEAESEGVLISLDKTSKGYAIIFYRGKNYRRPQIMKPRN 865
Query: 766 LLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYD-KLDSA 824
LLT+R+ALARSIELQR+EAL H+++L+ +L+S++ Q D +L D
Sbjct: 866 LLTRRQALARSIELQRREALKHHISSLQGKIWKLQSQLVQTKVASEKQDLKLLQTVEDDL 925
Query: 825 YATEDDDSEDEGDEAYLEMYAGGN--DNEDEIDN 856
+ +DDD ED+G+EAYL+ Y+ + D ED+ +N
Sbjct: 926 SSDDDDDVEDDGEEAYLQTYSSADEEDVEDDANN 959
>gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 316/633 (49%), Positives = 448/633 (70%), Gaps = 13/633 (2%)
Query: 220 GEVKFPWEKRKE--EVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKG 277
G PWE+ +E E G V+R S T LAE ++PE ELRRLR+ + K + ++
Sbjct: 323 GPALLPWEREEEDDEAFSGGRAVRR--SNTELAERSIPEPELRRLRDTALRMKERIKVGP 380
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+TQ +V+ IH KWK E+V+++ EG P+LNMKR H++LE +TGG+VIWRSG +V LYR
Sbjct: 381 GGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLYR 440
Query: 338 GVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHK-----QISMSVNLETASEEQETDF 392
G++Y VQ + + + VS A + Q S + +++ + +F
Sbjct: 441 GMNYNFQCVQSYAKFIEIDS--GKGVSDANSAVLSHDGHNLQASRADGMKSLT--STGNF 496
Query: 393 VREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 452
E +++ LD LGPRY DW G P+PVDAD+LPG+V GY+PPFRVLPY ++STL
Sbjct: 497 SLESSETFDIDNFLDQLGPRYKDWSGRGPIPVDADLLPGVVHGYKPPFRVLPYKIKSTLR 556
Query: 453 RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMV 512
KE T L+RLAR PHFALGR+R+ QGLA AM+KLWEKS+IAKIA+KRG+ T ++RM
Sbjct: 557 DKEMTTLRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGIPNTCNDRMA 616
Query: 513 EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF 572
E+IKKLTGG LLSRNK+F+VFYRG +F++P V + L E++ A + QDEEE ARL+ASA
Sbjct: 617 EEIKKLTGGVLLSRNKEFIVFYRGNDFIAPKVRQVLVEKQEQAITQQDEEELARLKASAS 676
Query: 573 VLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLA 632
++ + I+ AGTL ET +A SRWGK ++D +E ++ + +H L++ L++KL
Sbjct: 677 IITIPKDIKGPLVAGTLAETTEAKSRWGKSVNDKQREEEMKHLSLLKHTSLLKNLKRKLI 736
Query: 633 RAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFD 692
A+ K+ +AE+AL+KV+E L PAE D E++TDEERF+FR++GL+M+AFL+LGRR VFD
Sbjct: 737 LAKTKVAKAEKALAKVQEFLTPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRREVFD 796
Query: 693 GTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRG 752
GTV+NMHLHWK+RELVKI+V+ K+F QAK IA++LEAES GVL+S+DK +KGY ++ YRG
Sbjct: 797 GTVQNMHLHWKHRELVKIVVRGKSFAQAKHIAISLEAESEGVLISLDKTTKGYVIIFYRG 856
Query: 753 KDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGT 812
K+Y+RP ++P+NLLT+R+ALARSIELQR+EAL H+++L+ +L+S++ Q
Sbjct: 857 KNYRRPQIMKPRNLLTRRQALARSIELQRREALKHHISSLQGKISKLQSQLVQTKVASEK 916
Query: 813 GDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYA 845
D +L ++ +++ DDD ED+G+EAYL+ Y+
Sbjct: 917 HDLKLLQTVEDDFSSSDDDVEDDGEEAYLQTYS 949
>gi|125549065|gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/625 (49%), Positives = 423/625 (67%), Gaps = 60/625 (9%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
G V PWE+ EG R+ S T LAE T+PE ELRRLR++ + K + R+ G
Sbjct: 312 GPVLLPWER------EGDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERMRVGPGG 365
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
+TQ +V+ IH+KW+ E+V+L+ EG P+LNMKR H+ILE +TGG+VIWRSG +V LYRG+
Sbjct: 366 VTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVLYRGM 425
Query: 340 SYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYE 399
+Y + VQ S +Q T+
Sbjct: 426 NYNLRCVQ--------------SYTQTTE------------------------------- 440
Query: 400 DEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNL 459
LGPRY DW G P+PVDAD+LPG+VPGY+ PFR+LPY V+STL KE T L
Sbjct: 441 ---------LGPRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLPYMVKSTLRNKEMTAL 491
Query: 460 QRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLT 519
+RLAR PHFALGR+R+ QGLA A++KLWEKSSIAKIA+KRGV T ++RM E+I+KLT
Sbjct: 492 RRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEEIRKLT 551
Query: 520 GGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIET 579
GG LLSRNK+++VFYRG +F++P V + L E++ A + QDEEE ARL+ASA + +
Sbjct: 552 GGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKASASISVKPKV 611
Query: 580 IEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLL 639
+ AGTL ET +A SRWG ++ ++ + +H L++ L++KL A+ K++
Sbjct: 612 FKNPPVAGTLAETREAKSRWGDSINAELRKKEKNHMILTKHTSLLRNLKRKLILAKTKVI 671
Query: 640 RAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMH 699
+AE+AL+KV+E L PAE D E++TDEERF+ R++GL+MKAFL+LGRR VFDGTV+NMH
Sbjct: 672 KAEKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMH 731
Query: 700 LHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPS 759
LHWK+RELVK++VK K+F Q K IA++LEAESGGVL+SVDK +KGYA+++YRGK+Y+ P
Sbjct: 732 LHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQ 791
Query: 760 TLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYD 819
L+P+NLL++RKALARSIELQR+E L H++ L +L+S++ +M D +L
Sbjct: 792 ILKPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKLKSQLVRMQVAGEKPDAELLQ 851
Query: 820 KLDSAYATEDDDSEDEGDEAYLEMY 844
+++ + +DD EDEG+EAYL+ Y
Sbjct: 852 TVEADLSKDDDKIEDEGEEAYLQTY 876
>gi|449452735|ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/642 (50%), Positives = 441/642 (68%), Gaps = 17/642 (2%)
Query: 181 IEKGSIEDIFYVEEGLLP--NARGGFSKESPLGLGEEVGSDGEVKFPWEK---RKEEVAE 235
I S ED ++ +LP R SK+ + + +G V PW++ R EV
Sbjct: 205 ISDDSSEDEAEIDTVVLPVTEKRSTLSKKIVHSVSSDNDDNGRVDLPWKREPRRDSEVDA 264
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G+ R S+T LAE LPE ELRRLRN++ + + + G+TQ ++D IHEKWK
Sbjct: 265 GQ-----RRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKGITQELLDSIHEKWKVD 319
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ--LNKRIY 353
E+V+LK EG +NMKR HE LE +TGGLVIWRSG+ + LYRG++Y +P VQ +
Sbjct: 320 EVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQA 379
Query: 354 KRNELPASSVSQATD----KQIHKQI-SMSVNLETASEEQETDFVREVKYEDEVEKLLDG 408
K N L + ++ D +++H + +MS + AS+ +T +E+ ++ LLD
Sbjct: 380 KSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHLLDE 439
Query: 409 LGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPP 468
+GPR+ DW GC+P+PVDAD+LPGIVPGY+PP R+LPYGVR L KE T +RLAR +PP
Sbjct: 440 IGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPP 499
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
HFALGR+RQLQGLA AM+KLWEK +IAKIA+KRGV+ T +ERM E+++ LTGGTLLSRNK
Sbjct: 500 HFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLSRNK 559
Query: 529 DFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGT 588
+++VFYRG ++L P +TEAL+ER +LA QD EEQ R ASA + ++ AGT
Sbjct: 560 EYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIESKVKASNAPLVAGT 619
Query: 589 LKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKV 648
L ET+ A SRWG + EN+ ++ + + L++ L+KKLA A+ K+ AE+ ++K+
Sbjct: 620 LTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKL 679
Query: 649 EESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 708
+E +P++ D E+ITDEER +FRK+GL MK +LLLGRRGV+DGTVENMHLHWK+RELV
Sbjct: 680 QEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELV 739
Query: 709 KIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLT 768
KIIV+ KT Q K +A++LEAES GV++S+DK +KGY ++VYRGK+Y RP +RPKN+LT
Sbjct: 740 KIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLT 799
Query: 769 KRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVK 810
+R+ALARSIELQR+EAL H+ LE L++E+E+ S K
Sbjct: 800 RRQALARSIELQRREALKHHILDLEEKIELLKAELEERKSGK 841
>gi|449529423|ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/642 (50%), Positives = 441/642 (68%), Gaps = 17/642 (2%)
Query: 181 IEKGSIEDIFYVEEGLLP--NARGGFSKESPLGLGEEVGSDGEVKFPWEK---RKEEVAE 235
I S ED ++ +LP R SK+ + + +G V PW++ R EV
Sbjct: 148 ISDDSSEDEAEIDTVVLPVTEKRSTLSKKIVHSVSSDNDDNGRVDLPWKREPRRDSEVDA 207
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G+ R S+T LAE LPE ELRRLRN++ + + + G+TQ ++D IHEKWK
Sbjct: 208 GQ-----RRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKGITQELLDSIHEKWKVD 262
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ--LNKRIY 353
E+V+LK EG +NMKR HE LE +TGGLVIWRSG+ + LYRG++Y +P VQ +
Sbjct: 263 EVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQA 322
Query: 354 KRNELPASSVSQATD----KQIHKQI-SMSVNLETASEEQETDFVREVKYEDEVEKLLDG 408
K N L + ++ D +++H + +MS + AS+ +T +E+ ++ LLD
Sbjct: 323 KSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHLLDE 382
Query: 409 LGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPP 468
+GPR+ DW GC+P+PVDAD+LPGIVPGY+PP R+LPYGVR L KE T +RLAR +PP
Sbjct: 383 IGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPP 442
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
HFALGR+RQLQGLA AM+KLWEK +IAKIA+KRGV+ T +ERM E+++ LTGGTLLSRNK
Sbjct: 443 HFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLSRNK 502
Query: 529 DFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGT 588
+++VFYRG ++L P +TEAL+ER +LA QD EEQ R ASA + ++ AGT
Sbjct: 503 EYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIESKVKASNAPLVAGT 562
Query: 589 LKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKV 648
L ET+ A SRWG + EN+ ++ + + L++ L+KKLA A+ K+ AE+ ++K+
Sbjct: 563 LTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKL 622
Query: 649 EESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 708
+E +P++ D E+ITDEER +FRK+GL MK +LLLGRRGV+DGTVENMHLHWK+RELV
Sbjct: 623 QEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELV 682
Query: 709 KIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLT 768
KIIV+ KT Q K +A++LEAES GV++S+DK +KGY ++VYRGK+Y RP +RPKN+LT
Sbjct: 683 KIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLT 742
Query: 769 KRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVK 810
+R+ALARSIELQR+EAL H+ LE L++E+E+ S K
Sbjct: 743 RRQALARSIELQRREALKHHILDLEEKIELLKAELEERKSGK 784
>gi|255546121|ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical protein [Ricinus communis]
Length = 930
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 332/675 (49%), Positives = 442/675 (65%), Gaps = 49/675 (7%)
Query: 200 ARGGFSK------ESPLG----LGEEVGSD---GEVKFPWEK-RKEEVAEGRWLVKRRSS 245
AR +SK E P G G +V D ++ PWEK R E EG KR S
Sbjct: 260 ARAKYSKSPSYINEKPFGANGGYGVQVSYDDNSSSIELPWEKERVMESVEGYLRGKR--S 317
Query: 246 RTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGA 305
T LAE LPE EL+RLRN+ + + ++ AG+ Q +VD +HEKW+ E+V+LK E
Sbjct: 318 NTELAERMLPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEP 377
Query: 306 PALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQ 365
+ NM+R HEILE +TGGLVIWRSG++V LYRG+SY++ V + K++E ++
Sbjct: 378 LSFNMRRTHEILENRTGGLVIWRSGSSVVLYRGISYKLHCV---RSFSKQDEAGKEILAH 434
Query: 366 ATDKQIHKQISMSVN----------------LETASEEQETDFVREVKYEDEVEKLLDGL 409
+ + +++ V L+ S E+ TDF E+ + LD L
Sbjct: 435 PEEVTSNATLNIGVKHFIGTTESYIPDRAKYLKDLSREELTDFT-------ELNQFLDEL 487
Query: 410 GPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPH 469
GPR+ DW G +PLPVDAD+L + PGY+PPFR+LPYGVR L KE T +RLAR +PPH
Sbjct: 488 GPRFEDWCGREPLPVDADLLLAVDPGYKPPFRLLPYGVRHCLTDKEMTIFRRLARTVPPH 547
Query: 470 FALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKD 529
FALGR+RQLQGLA A++KLWE+S+I KIA+KRGVQ T +ERM E++K LTGG LLSRNK+
Sbjct: 548 FALGRNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNTRNERMAEELKVLTGGILLSRNKE 607
Query: 530 FLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTL 589
++VFYRG +FL P + + L+ER++L QDEEEQAR A A V S +T + AGTL
Sbjct: 608 YIVFYRGNDFLPPAIVKTLKERKKLTYLKQDEEEQARQMALASVESSAKTSKVPLVAGTL 667
Query: 590 KETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVE 649
ET+ A S W + + ++REA + + A LV+ LE KLA A+ KL +AE+AL+KV
Sbjct: 668 AETVAATSHWRDQRGSPDIDEMLREAVLAKRASLVKHLENKLALAKGKLRKAEKALAKVH 727
Query: 650 ESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 709
E L P+ D E+I+DEERF+FRK+GL MK +L LG+RGV+DGT+ENMHLHWKYRELVK
Sbjct: 728 EHLDPSGLPTDLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVK 787
Query: 710 IIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTK 769
+IV+ K+F Q K IA++LEAESGGVLVS+++ +KGYA++VYRGK+Y P +RPKNLLTK
Sbjct: 788 VIVRGKSFAQVKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTK 847
Query: 770 RKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATED 829
R+AL RSIELQR+EAL H++ L+ L+ E+E M S G E DK+ S
Sbjct: 848 RQALVRSIELQRREALKHHISDLQERIELLKLELEDMES----GKEIDVDKMSSRLDDSS 903
Query: 830 DDS---EDEGDEAYL 841
E+ G+EAYL
Sbjct: 904 ISDSDVEEGGEEAYL 918
>gi|357158137|ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 962
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/671 (47%), Positives = 453/671 (67%), Gaps = 26/671 (3%)
Query: 198 PNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPES 257
PNA G S E V G V PWE+ ++ +G + + S T LAE T+PE
Sbjct: 306 PNATIGCSHEEDF-----VQKLGSVLLPWEREDDDAFDG--VRQGNRSNTELAEKTIPEP 358
Query: 258 ELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEIL 317
ELRRLR+ + K + RI G+TQA+V IH KW E+V+++ EG P+LNMKR HEIL
Sbjct: 359 ELRRLRDAALRMKERMRIGPGGVTQAIVKSIHSKWSVDEVVKMRFEGPPSLNMKRTHEIL 418
Query: 318 ERKTGGLVIWRSGTAVSLYRGVSYEVPSVQL---------NKRIYKRNELPASSVSQATD 368
E +TGG VIWRSG ++ LYRG++Y + VQ +K++ + + S V
Sbjct: 419 EDRTGGTVIWRSGRSIVLYRGMNYNLRCVQSYAKIAEVDSSKKVSDVSTVVPSCVEHNLQ 478
Query: 369 KQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADM 428
K ++ S ++ ++S+ F +++ LD LGPRY DW G P+PVDAD+
Sbjct: 479 KSSADGVNRSTSIVSSSQGATETF--------DIDSFLDQLGPRYKDWSGRSPIPVDADL 530
Query: 429 LPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKL 488
LPG+VP Y+PPFR LPY + +L KE T L+RLAR PHFALGR+R+ QGLA A++KL
Sbjct: 531 LPGVVPDYKPPFRQLPYRTKLSLRDKEMTALRRLARQTAPHFALGRNREHQGLASAIVKL 590
Query: 489 WEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEAL 548
WEKS+I KIA+KRGV T ++RM E+IKKLTGG L+SRNK++++FYRG +F++P + + L
Sbjct: 591 WEKSTIVKIAIKRGVPNTCNDRMAEEIKKLTGGVLISRNKEYIIFYRGNDFMTPKIRQVL 650
Query: 549 QERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHK 608
E+++ A + QD+EE ARL+ASA + ++ AGTL ET +A SRWG ++D +
Sbjct: 651 VEQQQQAITQQDQEELARLKASASITLIPNALKNPQVAGTLAETREAESRWGDLINDGRR 710
Query: 609 ENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEE 668
+ + +H L++ + +KL A+ K+ +AE AL+KV+E L PAE D E++TDEE
Sbjct: 711 KKERNHLILAKHTSLLKNMTRKLILAKTKVAKAEMALAKVQEFLSPAELPTDLETVTDEE 770
Query: 669 RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALE 728
RF+FR++GL+MKAFL+LGRR VF GTV+NMHLHWK+RELVKIIVK K+F Q K IA++LE
Sbjct: 771 RFLFRRIGLKMKAFLMLGRREVFAGTVQNMHLHWKHRELVKIIVKGKSFAQVKHIAISLE 830
Query: 729 AESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKH 788
AESGGVL+S+DK +KGY+++VYRGK+Y+RP L+P+NLLT+R+A+ARSIELQR+EAL H
Sbjct: 831 AESGGVLISLDKTTKGYSIIVYRGKNYKRPQILKPRNLLTRRRAMARSIELQRREALNHH 890
Query: 789 VATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGN 848
++ L +L+S++ QM G D L ++ +++DDD EDEGDEAYL+ Y +
Sbjct: 891 ISILRQKIWKLKSQLAQMRVAGGKQDADLLQTVEDDLSSDDDDIEDEGDEAYLQTYI--S 948
Query: 849 DNEDEIDNSTH 859
D ED+ N ++
Sbjct: 949 DGEDDAGNESN 959
>gi|356564786|ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/603 (48%), Positives = 423/603 (70%), Gaps = 12/603 (1%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
K+R S T LAE T+PE ELRRLR + + + + G+TQ +V +H+KW+ +E+V+
Sbjct: 188 KKRRSNTELAERTIPEHELRRLRKIALRMMERFDVGVKGITQELVASVHQKWRDAEVVKF 247
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI--YKRNEL 358
K + +MK+ H+ILE K GG+VIWRSG+++ LYRG++Y++P ++ K++ K N +
Sbjct: 248 KFGIPLSAHMKKAHQILESKIGGIVIWRSGSSIVLYRGMAYKLPCIENYKKVNLAKENAV 307
Query: 359 PAS-SVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVE-----KLLDGLGPR 412
S V +D Q ++ +V + ++ ++++++ E+ +E LLD LGPR
Sbjct: 308 DHSLHVGNGSDGQ--ASVNETVGTAESVIQESAEYLKDMSEEELMEMCDLNHLLDELGPR 365
Query: 413 YTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFAL 472
+ DW G PLPVDAD+LP +VPGY+ PFR+LPY +R L KE TN +RLAR PHFAL
Sbjct: 366 FKDWTGRQPLPVDADLLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRLARTTAPHFAL 425
Query: 473 GRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLV 532
GR+R+LQGLA AM+KLWE S+IAKIA+KRGV T ++RM E+++KLTGGTLLSRNK+++V
Sbjct: 426 GRNRELQGLARAMVKLWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGTLLSRNKEYIV 485
Query: 533 FYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKET 592
FYRG +FL P VT L ER++L QDEE++AR AS+ + + + + AGTL ET
Sbjct: 486 FYRGNDFLPPVVTNTLNERQKLTLLQQDEEDKARQIASSITVSNSKAAQVPLIAGTLTET 545
Query: 593 LDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESL 652
A + WG + EN++R++ + + + LV+ EKKLA A+ K +AE+AL+KV+ L
Sbjct: 546 RAATTNWGHQPSKQEIENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAEKALAKVQRDL 605
Query: 653 KPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIV 712
PA+ +D E++T+EERF+FRK+GL MK +LLLGRR V+ GT+ENMHLHWKYRELVK+IV
Sbjct: 606 DPADIPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIV 665
Query: 713 KVKTFDQAKKIALALEAESGGVLVSVDKISKG-YAMVVYRGKDYQRPSTLRPKNLLTKRK 771
K + Q K I+++LEAESGGVLVSVDK ++G + ++VYRGK+Y P +RPKNLLT+R+
Sbjct: 666 KGRNSAQVKHISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVVRPKNLLTRRQ 725
Query: 772 ALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQ-LYDKLDSAYATEDD 830
ALARS+ELQR+EAL H++ LE G L+SE+E M + K D + LY L++ +++DD
Sbjct: 726 ALARSVELQRREALKHHISDLEERIGLLKSELEDMKNGKEIEDSKTLYPALENPVSSDDD 785
Query: 831 DSE 833
E
Sbjct: 786 LEE 788
>gi|334187011|ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/621 (49%), Positives = 424/621 (68%), Gaps = 32/621 (5%)
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G W + R S T AE +PE EL+RLRN+ + + ++ AG+TQA+V+ IHEKW+
Sbjct: 228 GIW--RTRKSNTVEAERIVPEHELKRLRNVALRMVERVKVGSAGITQALVEAIHEKWEVD 285
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKR 355
E+V+LK +LNMKR HE+LE+KTGGLVIWRSG++V LYRG+SY++ VQ K+
Sbjct: 286 EVVKLKFSEPYSLNMKRTHEVLEKKTGGLVIWRSGSSVVLYRGISYKLKCVQT---FIKQ 342
Query: 356 NELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYED-----EVEKLLDGLG 410
N L A + +IH+ + ++ ++ ++ + V E E+ LLD +G
Sbjct: 343 NNLEA-------NPEIHRSVEARDYVQ-----EDGNYPKNVPKEQLSELCELNDLLDEVG 390
Query: 411 PRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHF 470
PR+ DW GC P PVDAD+LPG V GY+ PFR+LP GV+ L+ E T ++RLAR PPHF
Sbjct: 391 PRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSPPHF 450
Query: 471 ALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDF 530
ALGRSR+LQGLA AM+KLW KS+IAKIA+KRGV+ T +ERM E++K+LT G L+SRNK++
Sbjct: 451 ALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKEY 510
Query: 531 LVFYRGKNFLSPDVTEALQERER-LAKSLQDEEEQARLRAS--AFVLPSIETIEKSGTAG 587
+VFYRG +F+ P V EAL ER++ + + LQ +E+QAR AS A + ++ + AG
Sbjct: 511 IVFYRGNDFMPPAVAEALTERQKEITEVLQAKEDQAREMASTRATLTSQAKSPKTQLLAG 570
Query: 588 TLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSK 647
TL ET+ A+SRW E L RE+ + A L++ LE +L ++KL RAER L+K
Sbjct: 571 TLAETIAASSRWAPNASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAK 630
Query: 648 VEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 707
V++ L P+E D E IT+EER ++RK+GL M FLLLGRR V+DGT+ENMHLHWK+REL
Sbjct: 631 VQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHREL 690
Query: 708 VKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLL 767
VK+IV+ K+ Q K IA++LEAESGGVLVSVDK KGYA+++YRGK+YQ P LRP NLL
Sbjct: 691 VKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLL 750
Query: 768 TKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQ---LYDKLD-S 823
T++KA ARSIELQR+EAL HVA LE L++ + + DE+ LY ++D S
Sbjct: 751 TRKKAFARSIELQRREALKYHVADLEERIELLKTGQDDDMETRNKSDEEEENLYLRVDES 810
Query: 824 AYATEDDDS---EDEGDEAYL 841
+++++D+S E E +E +L
Sbjct: 811 DFSSDEDESLEWESEKNETFL 831
>gi|296087726|emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 327/789 (41%), Positives = 460/789 (58%), Gaps = 58/789 (7%)
Query: 143 STMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARG 202
+ + +I EKL+ GYV D DE R GS +IF LP R
Sbjct: 80 TAIQRIAEKLRSLGYV---------DGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRV 130
Query: 203 GFSKESPLGLGE----EVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESE 258
G + + L E E G+ G + E RKE E + + K +LAELTLPE E
Sbjct: 131 GHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDERAPTLAELTLPEEE 190
Query: 259 LRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILE 318
LRRL+ + Q + K ++ AG+T+ +V+ IHE+W+ +E+V+++ E LNMKR H+ILE
Sbjct: 191 LRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILE 250
Query: 319 RKTGGLVIWRSGTAVSLYRGVSYEVP------------------SVQLNKRIYKRNELPA 360
RKTGGLVIWRSG+ + LYRG +Y+ P Q+N + E+ +
Sbjct: 251 RKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCS 310
Query: 361 SS---VSQATDKQIHKQISMSVNLETASEEQETDFVR--EVKYEDEVEKLLDGLGPRYTD 415
S V A +K +S+ ++ F E + E+E ++LLDGLGPR+TD
Sbjct: 311 SGKGDVKSAGPMPANKIAPLSL-IQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTD 369
Query: 416 WPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRS 475
W G DPLP+DAD+LP +VPGY+ PFR+LPYG++ L E T L+RL R LP HFALGR+
Sbjct: 370 WWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRN 429
Query: 476 RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYR 535
R+LQGLA +MIKLWEK IAKIA+KRGVQ T SE M E++K LTGGTLLSR+++F+VFYR
Sbjct: 430 RKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYR 489
Query: 536 GKNFLSPDVTEALQERERLAKSLQDEE-EQARLRASAFVLPSIETIEKSGTAGTLKETLD 594
GK+FL P V+ A++ R + ++ + RL +A + GT + D
Sbjct: 490 GKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINA----------EESELGTSEHASD 539
Query: 595 ANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKP 654
+ DD +L + +R +V++ KL+ A K RAE+ L+++EE+ P
Sbjct: 540 KDC---DGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIP 596
Query: 655 AERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKV 714
+ + D E IT+EER+M RK+GLRMK FLLLGRRG+FDGTVENMHLHWKYRELVKII
Sbjct: 597 QQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNG 656
Query: 715 KTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALA 774
++ + +A LEAESGG+LV+V+++SKGYA+++YRGK+Y+RP++LRP+ LL KR+AL
Sbjct: 657 RSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALK 716
Query: 775 RSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED 834
RS+E QR+E+L HV L N L+ ++ K T +QL DK A E
Sbjct: 717 RSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLA-----RER 771
Query: 835 EGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTY 894
G + L + G D+ + ++HN + DFP D +++ + SE+
Sbjct: 772 YGADVILIHSSDGMDSSRDSLQTSHN-DKRIDFPSMC-DSDTDEANPEPSSESVLKEIET 829
Query: 895 CASTDIVEE 903
TD+ EE
Sbjct: 830 NVLTDMNEE 838
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 439 PFRVLPYGVRS-TLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
PFR P R L RK+A +++ P A+GRS + G+A + ++K +A +
Sbjct: 893 PFRAAPLSNRERLLLRKQALRMKKR-----PVIAVGRSNIVTGVAKTIKAHFQKHPLAIV 947
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+K + T+ + ++ +++ TG L+S+ ++ YRG
Sbjct: 948 NVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRG 986
>gi|225452572|ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 327/789 (41%), Positives = 460/789 (58%), Gaps = 58/789 (7%)
Query: 143 STMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARG 202
+ + +I EKL+ GYV D DE R GS +IF LP R
Sbjct: 80 TAIQRIAEKLRSLGYV---------DGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRV 130
Query: 203 GFSKESPLGLGE----EVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESE 258
G + + L E E G+ G + E RKE E + + K +LAELTLPE E
Sbjct: 131 GHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDERAPTLAELTLPEEE 190
Query: 259 LRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILE 318
LRRL+ + Q + K ++ AG+T+ +V+ IHE+W+ +E+V+++ E LNMKR H+ILE
Sbjct: 191 LRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILE 250
Query: 319 RKTGGLVIWRSGTAVSLYRGVSYEVP------------------SVQLNKRIYKRNELPA 360
RKTGGLVIWRSG+ + LYRG +Y+ P Q+N + E+ +
Sbjct: 251 RKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCS 310
Query: 361 SS---VSQATDKQIHKQISMSVNLETASEEQETDF--VREVKYEDEVEKLLDGLGPRYTD 415
S V A +K +S+ ++ F E + E+E ++LLDGLGPR+TD
Sbjct: 311 SGKGDVKSAGPMPANKIAPLSL-IQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTD 369
Query: 416 WPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRS 475
W G DPLP+DAD+LP +VPGY+ PFR+LPYG++ L E T L+RL R LP HFALGR+
Sbjct: 370 WWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRN 429
Query: 476 RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYR 535
R+LQGLA +MIKLWEK IAKIA+KRGVQ T SE M E++K LTGGTLLSR+++F+VFYR
Sbjct: 430 RKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYR 489
Query: 536 GKNFLSPDVTEALQERERLAKSLQDEE-EQARLRASAFVLPSIETIEKSGTAGTLKETLD 594
GK+FL P V+ A++ R + ++ + RL +A + GT + D
Sbjct: 490 GKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINA----------EESELGTSEHASD 539
Query: 595 ANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKP 654
+ DD +L + +R +V++ KL+ A K RAE+ L+++EE+ P
Sbjct: 540 KDC---DGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIP 596
Query: 655 AERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKV 714
+ + D E IT+EER+M RK+GLRMK FLLLGRRG+FDGTVENMHLHWKYRELVKII
Sbjct: 597 QQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNG 656
Query: 715 KTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALA 774
++ + +A LEAESGG+LV+V+++SKGYA+++YRGK+Y+RP++LRP+ LL KR+AL
Sbjct: 657 RSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALK 716
Query: 775 RSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED 834
RS+E QR+E+L HV L N L+ ++ K T +QL DK A E
Sbjct: 717 RSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKDKETNSKQLVDKSRLHLA-----RER 771
Query: 835 EGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTY 894
G + L + G D+ + ++HN + DFP D +++ + SE+
Sbjct: 772 YGADVILIHSSDGMDSSRDSLQTSHN-DKRIDFPSMC-DSDTDEANPEPSSESVLKEIET 829
Query: 895 CASTDIVEE 903
TD+ EE
Sbjct: 830 NVLTDMNEE 838
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 439 PFRVLPYGVRS-TLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
PFR P R L RK+A +++ P A+GRS + G+A + ++K +A +
Sbjct: 893 PFRAAPLSNRERLLLRKQALRMKKR-----PVIAVGRSNIVTGVAKTIKAHFQKHPLAIV 947
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+K + T+ + ++ +++ TG L+S+ ++ YRG
Sbjct: 948 NVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRG 986
>gi|297734212|emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 537 bits (1384), Expect = e-149, Method: Compositional matrix adjust.
Identities = 341/839 (40%), Positives = 479/839 (57%), Gaps = 49/839 (5%)
Query: 27 HGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLC 86
H + HF + L F +++S + +N K + ++ S+ + N N
Sbjct: 16 HSSSLHFLFPKTPLSLLKPFSSLR-TTDSNNLRNRKTKRSLYPWDHQNSRKSSNTNPN-S 73
Query: 87 SSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDS---DGNGVGGVDDGGS 143
S+ SW+ KW PN S+ +D + G T+S DG G S
Sbjct: 74 STKSWINKWPSPN---------PSIESEHKGID--SKGRDGTESRYFDGRS------GTS 116
Query: 144 TMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGG 203
+ +IV +L+ G G +DE + +G+ +E G + E+ R
Sbjct: 117 AIERIVLRLRNLGL---------GSDDEDKNEGE---VESGDTMPVTGDEKLGDLLQRDW 164
Query: 204 FSKESPLGLGEEVGSDGEVKFPWEKRKEEVA---EGRWLVKRRSSRT-SLAELTLPESEL 259
+S L E+ + ++ PWE+ +E +GR +KRR+ R +LAELT+ + EL
Sbjct: 165 VRPDSMLIEDED---EDDMILPWERGEERQEEEGDGR--LKRRAVRAPTLAELTIEDEEL 219
Query: 260 RRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILER 319
RRLR L + + + AG+TQAV+ IHEKW+ E+VRLK A A +MK HEI+ER
Sbjct: 220 RRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVER 279
Query: 320 KTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSV 379
+TGGLV WRSG+ + ++RG +YE P + + + L VS + + +
Sbjct: 280 RTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGP 338
Query: 380 NLETASEEQETDFVREVKYEDEVE--KLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQ 437
LE S E E+E E LLDGLGPR+ DW G LPVD D+LP +PGY+
Sbjct: 339 TLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYK 398
Query: 438 PPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
P R+LP G+R L E TNL++LA+ LP HFALGR+R QGLA A+IKLWEKS + KI
Sbjct: 399 TPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKI 458
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKS 557
A+K G+Q T ++ M E+IK LTGG LL RNK ++V YRGK+FL V AL ERE L K
Sbjct: 459 AVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKH 518
Query: 558 LQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEV 617
+Q EE+ R A +PS E AGTL E +A +RWG+ + E ++ EA
Sbjct: 519 IQVVEEKVRT-GGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASR 577
Query: 618 RRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGL 677
+ A +V+++E KLA A+ K LRAER L+K+E S+ PA D E+ITDEERFMFR+LGL
Sbjct: 578 AKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGL 637
Query: 678 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVS 737
RMKA+LLLG RGVFDG +ENMHLHWK+RELVK+I K KT + A LE ESGG+LV+
Sbjct: 638 RMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVA 697
Query: 738 VDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAG 797
++++ KGYA++ YRGK+Y+RP +LRP+NLLTK KAL RS+ +QR EAL +H++ LE
Sbjct: 698 IERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE 757
Query: 798 RLRSEIEQMNSV--KGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEI 854
+++ EI K + + + + D +ED+ S + D +E +D E I
Sbjct: 758 QMKMEIGDSKDAEDKDSWSTEGHGQFDQVSESEDEASGMDSDADDVEDIDWKDDEESGI 816
>gi|147815878|emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 330/786 (41%), Positives = 460/786 (58%), Gaps = 47/786 (5%)
Query: 27 HGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLC 86
H + HF + L + F +++S + +N K + ++ S+ + N N
Sbjct: 16 HSSSLHFLFPKTPLSLL-KPFSSLRTTDSNNLRNRKTKRSLYPWDHQNSRKSSNTNPN-S 73
Query: 87 SSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDS---DGNGVGGVDDGGS 143
S+ SW+ KW PN S+ +D + G T+S DG G S
Sbjct: 74 STKSWINKWPSPN---------PSIESEHKGID--SKGRDGTESRYFDGRS------GTS 116
Query: 144 TMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGG 203
+ +IV +L+ G G +DE + +G+ +E G + E+ R
Sbjct: 117 AIERIVLRLRNLGL---------GSDDEDKNEGE---VESGDTMPVTGDEKLGDLLQRDW 164
Query: 204 FSKESPLGLGEEVGSDGEVKFPWEKRKEEVA---EGRWLVKRRSSRT-SLAELTLPESEL 259
+S L E+ + ++ PWE+ +E +GR +KRR+ R +LAELT+ + EL
Sbjct: 165 VRPDSMLIEDED---EDDMILPWERGEERQEEEGDGR--LKRRAVRAPTLAELTIEDEEL 219
Query: 260 RRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILER 319
RRLR L + + + AG+TQAV+ IHEKW+ E+VRLK A A +MK HEI+ER
Sbjct: 220 RRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVER 279
Query: 320 KTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSV 379
+TGGLV WRSG+ + ++RG +YE P + + + L VS + + +
Sbjct: 280 RTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRNDNNGGP 338
Query: 380 NLETASEEQETDFVREVKYEDEVE--KLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQ 437
LE S E E+E E LLDGLGPR+ DW G LPVD D+LP +PGY+
Sbjct: 339 TLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYK 398
Query: 438 PPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
P R+LP G+R L E TNL++LA+ LP HFALGR+R QGLA A+IKLWEKS + KI
Sbjct: 399 TPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKI 458
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKS 557
A+K G+Q T ++ M E+IK LTGG LL RNK ++V YRGK+FL V AL ERE L K
Sbjct: 459 AVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKH 518
Query: 558 LQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEV 617
+Q EE+ R A +PS E AGTL E +A +RWG+ + E ++ EA
Sbjct: 519 IQVVEEKVRT-GGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASR 577
Query: 618 RRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGL 677
+ A +V+++E KLA A+ K LR ER L+K+E S+ PA D E+ITDEERFMFR+LGL
Sbjct: 578 AKSARVVKRIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGL 637
Query: 678 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVS 737
RMKA+LLLG RGVFDG +ENMHLHWK+RELVK+I K KT + A LE ESGG+LV+
Sbjct: 638 RMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVA 697
Query: 738 VDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAG 797
++++ KGYA++ YRGK+Y+RP +LRP+NLLTK KAL RS+ +QR EAL +H++ LE
Sbjct: 698 IERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE 757
Query: 798 RLRSEI 803
+++ EI
Sbjct: 758 QMKMEI 763
>gi|15229636|ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana]
gi|17380904|gb|AAL36264.1| unknown protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 283/596 (47%), Positives = 392/596 (65%), Gaps = 12/596 (2%)
Query: 222 VKFPWEKRKEE------VAEGRWLV--KRRSSRTSLAELTLPESELRRLRNLTFQTKSKT 273
V PWEK +EE V EG V KRR+ SLAELT+ +SELRRLR + +
Sbjct: 203 VLLPWEKNEEEQAAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRLRRDGMYLRVRI 262
Query: 274 RIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAV 333
I AGLTQAV++ I++ W+ E+VRLK A +MK HEI+ER+TGG+VIWR+G+ +
Sbjct: 263 NIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVM 322
Query: 334 SLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFV 393
+YRG+ Y+ P V N+ + L VS A D+ + + + S L +
Sbjct: 323 VVYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDEATNAKDNQSAPLVIKDPIIKNPIR 382
Query: 394 REVKYEDEVE--KLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTL 451
+E E+EVE LLD LGPR+ +W G LPVDAD+LP +PGY+ PFR+LP G+RS L
Sbjct: 383 KENMTEEEVEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSNL 442
Query: 452 ARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERM 511
E TNL+++ + LP HFALGR+R QGLA A++++WEKS IAKIA+KRG+Q T ++ M
Sbjct: 443 TNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLM 502
Query: 512 VEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASA 571
+++K LTGG LL RNK ++V YRGK+FL V L ER+ L K +QD EE+ R R
Sbjct: 503 ADEVKTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRNREIE 562
Query: 572 FVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKL 631
V P + + AGTL E +A +RWGK + H+E ++ EA +A +V++++ KL
Sbjct: 563 AVQPVGDKV--PAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKL 620
Query: 632 ARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVF 691
A+ K RAE+ LSK+E S+ P D E I++EER MFRK+GL+MKA+L +G RGVF
Sbjct: 621 NLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPIGIRGVF 680
Query: 692 DGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYR 751
DG +ENMHLHWK+RELVK+I K K ++ A LE ESGGVLV+++K+ KG+A++ YR
Sbjct: 681 DGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALIYYR 740
Query: 752 GKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
GK+Y+RP +LRP+NLLTK KAL RSI +QR EAL +H++ LE +++S++ N
Sbjct: 741 GKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQLTSKN 796
>gi|224118814|ref|XP_002317913.1| predicted protein [Populus trichocarpa]
gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 328/803 (40%), Positives = 469/803 (58%), Gaps = 78/803 (9%)
Query: 65 TCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALG 124
+ S TN K+ N W+ KW KP++ + +K P + V+ K +
Sbjct: 45 SSSLRTNKTPKTQQKNPN--------WISKW-KPSQNHSIKNPPSEVSQEKPHY------ 89
Query: 125 FARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRG-QGKERVIEK 183
F+ D G + + +IV +L+ G G D DE G +G E I
Sbjct: 90 FSN-----------DKGQNAIERIVLRLRNLGL-------GSDDEDELEGLEGSE--ING 129
Query: 184 GSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDG-EVKFPWEKRKEEVAE------- 235
G + EE L + + + + + GSD E PWE+ + E
Sbjct: 130 GGLTG----EERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREERGAVEMEGGIES 185
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
GR KRR +LAELT+ + ELRRLR + + + I AG+T AV++ IH++W+
Sbjct: 186 GR---KRRGKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKE 242
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKR 355
E+VRLK A +MK HEI+ER+TGGLVIWR+G+ + ++RG +Y+ P +L +
Sbjct: 243 ELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQPADREG 302
Query: 356 NELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVR-------EVKYEDEVEKLLDG 408
+ L VS +TD + + S N+ T+S E+ +R + E E+ LLD
Sbjct: 303 DALFVPDVS-STDSVMTR----SSNIATSSSEKSKLVMRITEPTENMTEEEAELNSLLDD 357
Query: 409 LGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPP 468
LGPR+ +W G LPVDAD+LP VP Y+ PFR+LP G+R+ L E TN+++LA+ LP
Sbjct: 358 LGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGMRARLTNAEMTNMRKLAKALPC 417
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
HFALGR+R QGLAVA++KLWEKS +AKIA+KRG+Q T ++ M +++K LTGG LL RNK
Sbjct: 418 HFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNK 477
Query: 529 DFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGT 588
++V +RGK+FL V AL ER+ + K +QD EE+ R S PS E E AGT
Sbjct: 478 YYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVEERVR-SNSVEAAPSGED-EGKALAGT 535
Query: 589 LKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKV 648
L E +A +RWG+ + +E ++ EA + A LV++ E KLA A+ K LRAE LSK+
Sbjct: 536 LAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAESLLSKI 595
Query: 649 EESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 708
E ++ P+ D E+I++EER MFR++GLRMKA+L LG RGVFDG +ENMHLHWK+RELV
Sbjct: 596 ETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELV 655
Query: 709 KIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLT 768
K+I K KT + A LE ESGGVLV+++++ KG+A++ YRGK+Y+RP ++RP+NLLT
Sbjct: 656 KLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRGKNYRRPISIRPRNLLT 715
Query: 769 KRKALARSIELQRQEALLKHVATLESNAGRLRSEI----EQMNSVKGTGDE--------Q 816
K KAL RS+ +QR EAL +H+ LE N + E+ E+ N + +E +
Sbjct: 716 KAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEMGLSKEEENENNWSSEEHAPLNNVSK 775
Query: 817 LYDKLDSAYATEDDDSEDEGDEA 839
L D A+ TE DSED+ +E
Sbjct: 776 LTQSEDKAFFTE-SDSEDDYNEG 797
>gi|47900539|gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 798
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/641 (45%), Positives = 407/641 (63%), Gaps = 52/641 (8%)
Query: 221 EVKFPWEKRKEEVAEGRWL----VKRRSSRT-SLAELTLPESELRRLRNLTFQTKSKTRI 275
E PWE+ +EVA GR VKRR R SLAELT+ + ELRRLR L + + +
Sbjct: 149 ESVLPWER--DEVARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITV 206
Query: 276 KGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSL 335
AG+TQAV + IH+ W+ SE+VRLK A +MK HE++ER+TGGL+IWRSG+ + +
Sbjct: 207 PKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVV 266
Query: 336 YRGVSYEVP----SVQLNKRIYKRNE----LPASSV-----SQATDKQIHKQISMSVNLE 382
YRG +Y+ P ++ N K + +P +S SQ D ++I+ +N++
Sbjct: 267 YRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARLNMQ 326
Query: 383 TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 442
+ E + E ++LD LGPR+ DW G LPVDAD+LP +PGY+ PFR+
Sbjct: 327 NTEDMTEEEL--------EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRL 378
Query: 443 LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 502
LP G+R TL E TNL++LAR LP HFALGR+R QGLA A++KLWEKS + KIA+KRG
Sbjct: 379 LPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRG 438
Query: 503 VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 562
+Q T ++ M E+IK LTGGTLL RNK ++V YRGK+FL V AL ERE L K +Q+ E
Sbjct: 439 IQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVE 498
Query: 563 EQARLRASAFVLPSIETIEKS----GTAGTLKETLDANSRWGKRLDDSHKENLVREAEVR 618
EQ R +P + +++ S AGTL E +A +RWG+ + +E + +
Sbjct: 499 EQKR------CIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRS 552
Query: 619 RHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLR 678
L ++LE KL+ A+ K+ RAER LSK+E S+ A D E ITDEER +FR++GLR
Sbjct: 553 VKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLR 612
Query: 679 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 738
+KA+L +G RGVFDG +ENMHLHWK+RE+VK+I K KT ++ A LE ESGG+LV++
Sbjct: 613 LKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAI 672
Query: 739 DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGR 798
++++KGYA++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR EAL +H+A LE+N
Sbjct: 673 ERVTKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENN--- 729
Query: 799 LRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEA 839
I QM G ++D Y + DSE+E +EA
Sbjct: 730 ----IRQMKLDLGI-------EVDEEYEEDGSDSENENNEA 759
>gi|125553229|gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/641 (45%), Positives = 406/641 (63%), Gaps = 52/641 (8%)
Query: 221 EVKFPWEKRKEEVAEGRWL----VKRRSSRT-SLAELTLPESELRRLRNLTFQTKSKTRI 275
E PWE+ +EVA GR VKRR R SLAELT+ + ELRRLR L + + +
Sbjct: 152 ESVLPWER--DEVARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITV 209
Query: 276 KGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSL 335
AG+TQAV + IH+ W+ SE+VRLK A +MK HE++ER+TGGL+IWRSG+ + +
Sbjct: 210 PKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVV 269
Query: 336 YRGVSYEVP----SVQLNKRIYKRNE----LPASSV-----SQATDKQIHKQISMSVNLE 382
YRG +Y+ P ++ N K + +P +S SQ D ++I+ +N++
Sbjct: 270 YRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARLNMQ 329
Query: 383 TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 442
+ E + E ++LD LGPR+ DW G LPVDAD+LP +PGY+ PFR+
Sbjct: 330 NTEDMTEEEL--------EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRL 381
Query: 443 LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 502
LP G+R TL E TNL++LAR LP HFALGR+R QGLA A++KLWEKS + KIA+KRG
Sbjct: 382 LPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRG 441
Query: 503 VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 562
+Q T ++ M E+IK LTGGTLL RNK ++V YRGK+FL V AL ERE L K +Q+ E
Sbjct: 442 IQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVE 501
Query: 563 EQARLRASAFVLPSIETIEKS----GTAGTLKETLDANSRWGKRLDDSHKENLVREAEVR 618
EQ R +P + +++ S AGTL E +A +RWG+ + +E + +
Sbjct: 502 EQKR------CIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRS 555
Query: 619 RHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLR 678
L ++LE KL+ A+ K+ RAER LSK+E S+ A D E ITDEER +FR++GLR
Sbjct: 556 VKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLR 615
Query: 679 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 738
+KA+L +G RGVFDG +ENMHLHWK+RE+VK+I K KT ++ A LE ESGG+LV++
Sbjct: 616 LKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAI 675
Query: 739 DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGR 798
+++ KGYA++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR EAL +H+A LE+N
Sbjct: 676 ERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENN--- 732
Query: 799 LRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEA 839
I QM G ++D Y + DSE+E +EA
Sbjct: 733 ----IRQMKLDLGI-------EVDEEYEEDGSDSENENNEA 762
>gi|297830494|ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
Length = 846
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/592 (47%), Positives = 387/592 (65%), Gaps = 12/592 (2%)
Query: 222 VKFPWEKRKEEVAEGRW--------LVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKT 273
V PWEK +EE A R + K R+ SLAELT+ +SELRRLR + +
Sbjct: 203 VLLPWEKNEEEQAAERVEGEGGVAVMKKGRARAPSLAELTVEDSELRRLRRDGMYLRVRI 262
Query: 274 RIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAV 333
I AGLTQAV++ I++ W+ E+VRLK A +MK HEI+ER+TGG+VIWR+G+ +
Sbjct: 263 NIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVM 322
Query: 334 SLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFV 393
+YRG+ Y+ P V N+ + L VS A D+ + + + S E +
Sbjct: 323 VVYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDEATNAKDNQSPPSEIKDPIIKNPIR 382
Query: 394 REVKYEDEVE--KLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTL 451
+E E+E E LLD LGPR+ +W G LPVDAD+LP +PGY+ PFR+LP G+RS L
Sbjct: 383 KENMTEEEAEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSNL 442
Query: 452 ARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERM 511
E TNL+++ + LP HFALGR+R QGLA A++++WEKS IAKIA+KRG+Q T ++ M
Sbjct: 443 TNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLM 502
Query: 512 VEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASA 571
+++K LTGG LL RNK ++V YRGK+FL V L ER+ L K +QD EE+ R R
Sbjct: 503 ADEVKALTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQDVEERVRNREIE 562
Query: 572 FVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKL 631
V P + + AGTL E +A +RWGK + H+E ++ EA +A +V++++ KL
Sbjct: 563 AVQPVGDKV--PAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKL 620
Query: 632 ARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVF 691
A+ K RAE+ LSK+E S+ P D E I++EER MFRK+GL+MKA+L LG RGVF
Sbjct: 621 NLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPLGIRGVF 680
Query: 692 DGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYR 751
DG +ENMHLHWK+RELVK+I K K + A LE ESGGVLV+++K+ KG+A++ YR
Sbjct: 681 DGVIENMHLHWKHRELVKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYR 740
Query: 752 GKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
GK+Y+RP +LRP+NLLTK KAL RSI +QR EAL +H++ LE +++SE+
Sbjct: 741 GKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSEL 792
>gi|356522763|ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 734
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/576 (48%), Positives = 378/576 (65%), Gaps = 19/576 (3%)
Query: 239 LVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIV 298
L KRR SLA+LTL + LRRLR + + + + AGLTQ V++ IH++W+ E+V
Sbjct: 169 LKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEKIHKRWRKEELV 228
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNEL 358
RLK A +M++ HEI+ER+TGGLV WRSG+ + +YRG+ Y+ P Q K +
Sbjct: 229 RLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSQKEVNEKKGDGF 288
Query: 359 PASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKY-------EDEVEKLLDGLGP 411
VS+ D + T++ E+ VRE ++ E E LLDGLGP
Sbjct: 289 FVPDVSKREDS----------STATSTSEKSEVVVREREHPENMSEAEAEYNALLDGLGP 338
Query: 412 RYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFA 471
R+ W G LPVDAD+LP VPGY+ PFR+LP G+RS L E TNL++LA+ LP HFA
Sbjct: 339 RFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFA 398
Query: 472 LGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFL 531
LGR+R QGLA A++KLWEKS +AKIA+KRG+Q T +E M E++K LTGGTLL RNK F+
Sbjct: 399 LGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKMLTGGTLLLRNKYFI 458
Query: 532 VFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKE 591
V YRGK+F+ V L ERE L K +QD E++ R RA + + E + AGTL E
Sbjct: 459 VIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAI--PLGQGEATAQAGTLAE 516
Query: 592 TLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEES 651
+A +RWG+ + +E +V EA + A LV+++E K+ A+ K LRAE+ L+K+E S
Sbjct: 517 FYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKLRAEKLLAKIEAS 576
Query: 652 LKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKII 711
+ PA D E+ITDEER MFRK+GLRMK +L LG RGVFDG VENMHLHWK+RELVK++
Sbjct: 577 MVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLM 636
Query: 712 VKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRK 771
K KT + A LE ESGG+LV+++K+SK +A++ YRGK+Y+RP TLRP+NLLTK K
Sbjct: 637 TKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLLTKGK 696
Query: 772 ALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
AL R + +QR EAL +H+ LE +++ E+ M+
Sbjct: 697 ALKRHVAMQRHEALSQHITELEKTIEQMKKELVSMD 732
>gi|168024308|ref|XP_001764678.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683972|gb|EDQ70377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 625
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/595 (47%), Positives = 396/595 (66%), Gaps = 28/595 (4%)
Query: 225 PWEKRKEEVA---EGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLT 281
PW+K E EG+ K+R S+AELT+P+ EL+RLR L Q + + +I G+T
Sbjct: 1 PWDKNTHEEVNEEEGQVAKKQRVRSPSMAELTIPDFELKRLRTLGLQLQGRLKIGRLGVT 60
Query: 282 QAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
+V+ IHE+W+T EI ++K + ++NMK+ HE LER TGGLVIWRSG+A +YRG Y
Sbjct: 61 PGIVEAIHERWRTCEIAKVKCDAPLSMNMKKAHEDLERLTGGLVIWRSGSAAVVYRGKDY 120
Query: 342 EVPSVQLNKRIYKRNELPASSVSQATDKQIHKQI----SMSVNLETASEEQETDFVREVK 397
PSV+ + +R S++ D++ +QI ++SV E ++QE D
Sbjct: 121 VHPSVREREEREERERRKLLSLNLDEDEEREEQIDSTSTVSVEREAYLKKQENDL----- 175
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
VE++LDGLGPRY DW G P+PVD D+L ++ PFR+LPYGV+ L E T
Sbjct: 176 --RMVEEILDGLGPRYADWTGRRPVPVDGDLLLSSDFEFKRPFRLLPYGVKPKLNNFELT 233
Query: 458 NLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKK 517
L+ LAR +PPH LG++R L G+A A++KLWE+S I KI +KRGVQ T++ERM E++K+
Sbjct: 234 ELRHLARPIPPHIVLGKNRGLDGVAAAIVKLWERSEIVKIGVKRGVQNTSNERMAEELKR 293
Query: 518 LTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI 577
LTGGTLLSR+K+F+VF+RGK+FL P V AL+ER+++AK+LQ+EEE+ R+ + + +
Sbjct: 294 LTGGTLLSRDKEFIVFHRGKDFLPPAVQAALEERDQMAKALQEEEERFRMGGRSRPVQVV 353
Query: 578 ETIEKSGT--AGTLKETLDANSRWGKRL--DDSHKENLVREAEVRRHAYLVQKLEKKLAR 633
E G GTL+E L+ ++W L D++ KE + A R+ A ++ KL
Sbjct: 354 EETRYQGVYKVGTLEEALETRAKWEAWLDSDEARKERIA--ARKRKRAQATDRIRSKLNL 411
Query: 634 AERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDG 693
A +K+ RA+ L+KVE PA D E ++D ER+M+RKLGL+MKAFLLLGRRGVF G
Sbjct: 412 ALKKMERAQLELNKVEAKTTPANVTLDKEHLSDGERYMYRKLGLKMKAFLLLGRRGVFSG 471
Query: 694 TVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGK 753
TVENMHLHWKYRELVKI+VK + +A++IA LE ESGG+LV + SKG A+V+YRGK
Sbjct: 472 TVENMHLHWKYRELVKILVKT-SLPEAERIAKILENESGGILVDIITTSKGQAIVMYRGK 530
Query: 754 DYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNS 808
+YQRPS LRP++LLTKR+AL RS+E+QR E+L KH+ L+ EIE M +
Sbjct: 531 NYQRPSELRPRHLLTKRQALKRSLEMQRMESLEKHIRV-------LKKEIETMQA 578
>gi|356529577|ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 791
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 291/619 (47%), Positives = 391/619 (63%), Gaps = 39/619 (6%)
Query: 239 LVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIV 298
L KRR SLA+LTL + LRRLR + + + + AGLT+ V++ IH++W+ E+V
Sbjct: 170 LKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEVMEKIHKRWRKEELV 229
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNEL 358
RLK A +M++ HEI+ER+TGGLV WRSG+ + +YRG+ Y+ P + K +
Sbjct: 230 RLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSRKELNEKKGDGF 289
Query: 359 PASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKY-------EDEVEKLLDGLGP 411
VS+ D + T++ E+ VRE ++ E E LLDGLGP
Sbjct: 290 FVPDVSKRED-----------STATSTSEKSEVVVREREHPENMSEAEAEYNALLDGLGP 338
Query: 412 RYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFA 471
R+ W G LPVDAD+LP VPGY+ PFR+LP G+RS L E TNL++LA+ LP HFA
Sbjct: 339 RFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFA 398
Query: 472 LGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFL 531
+GR+R QGLA A++KLWEKS ++KIA+KRG+Q T +E M E++K LTGGTLL RNK F+
Sbjct: 399 VGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLTGGTLLLRNKYFI 458
Query: 532 VFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKE 591
V YRGK+F+ V L ERE L K +QD E++ R RA +PS + E + AGTL E
Sbjct: 459 VIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRA-VDAIPSGQG-EATAQAGTLAE 516
Query: 592 TLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEES 651
+A +RWG+ + +E ++ EA + A LV+++E K+ A+ K LRAE+ L+K+E S
Sbjct: 517 FYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRAEKLLAKIEAS 576
Query: 652 LKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKII 711
+ PA D E+ITDEER MFRK+GLRMK +L LG RGVFDG VENMHLHWK+RELVK++
Sbjct: 577 MVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLM 636
Query: 712 VKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRK 771
K KT + A LE ESGG+LV+++K+SK +A++ YRGK+Y+RP TLRP+NLLTK K
Sbjct: 637 TKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLLTKGK 696
Query: 772 ALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDD 831
AL R + +QR EAL +H+ LE IEQM K G Q D D EDD
Sbjct: 697 ALKRHVAMQRHEALSQHITELEKT-------IEQMK--KELGMTQDSDVEDGGSIEEDDH 747
Query: 832 ----------SEDEGDEAY 840
SEDE + Y
Sbjct: 748 NQIDISELALSEDEDSDGY 766
>gi|357496109|ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355493358|gb|AES74561.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 1096
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/678 (42%), Positives = 419/678 (61%), Gaps = 68/678 (10%)
Query: 248 SLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPA 307
+LAEL+L + E+ RLR L +Q K K ++ AG+T+ +V+ IHE+W+ SE+VR+ E
Sbjct: 145 TLAELSLTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDLCR 204
Query: 308 LNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQAT 367
+NMKR H+ILERKTGGLV+WRSG+ + LYRG+ Y+ P L+ + + E A +
Sbjct: 205 INMKRTHDILERKTGGLVVWRSGSKIILYRGIDYKYPYF-LSDEVLREEESDALQPMDSD 263
Query: 368 DKQIHKQISMSVNLETASEEQETDFVREVK----------------------YEDEVEKL 405
D+ I ++ + S + +A+ ++ ++ VK +EV+ L
Sbjct: 264 DESIDERKTHSSEMSSATHAGQSSNIKTVKPALVQGVGTPNRVRFQLPGEAELLEEVDSL 323
Query: 406 LDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARV 465
L+GLGPR+TDW G DP+PVDAD+LP ++PG++PPFR+LPYGV+S L E T L+RL R
Sbjct: 324 LEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRPPFRLLPYGVQSKLTDDEMTTLKRLGRT 383
Query: 466 LPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS 525
LP HFALGR+ +LQG+A A+IK WE+ I IA+KRGVQ T++ +M E+IK LTGGTLLS
Sbjct: 384 LPCHFALGRNWKLQGVAAAIIKFWERCEIVNIAVKRGVQNTSNRKMAEEIKYLTGGTLLS 443
Query: 526 RNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGT 585
RNK+ +V YRGK+FL V+ A+++R + K+ ++ E ++ + AS+ + K T
Sbjct: 444 RNKEVIVIYRGKDFLPAAVSSAIKKRWKAVKNKENAENRSAITASS------HSERKHMT 497
Query: 586 AGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERAL 645
KET++ + L+ +A+ +Q+ KLA+A K +AE+ L
Sbjct: 498 FIKDKETIE--------------KPLLMKAKA-----AIQRTSFKLAQALEKKEKAEKLL 538
Query: 646 SKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYR 705
+E+ E + D ESIT+EER+M R++GL+MK FLLLGRRGVFDGTVENMHLHWKYR
Sbjct: 539 ESLEKDESLQEEEIDKESITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYR 598
Query: 706 ELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKN 765
ELVKII ++ + A + A LEAESGG+LV+V++++KGYA++VYRGK+Y RP +LRP+
Sbjct: 599 ELVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPDSLRPRT 658
Query: 766 LLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAY 825
LL K++AL RSIE QR+EAL HV L+ N L+ ++ + + EQ+ +L S
Sbjct: 659 LLNKKQALKRSIEAQRREALKLHVLKLDKNINELKHQMVKDEA----SSEQIAKELRSDL 714
Query: 826 ATEDDDSEDEGD------EAYLEMYAGGNDNEDEIDN----------STHNLEMESDFPY 869
ATE+ E D E ++E+ G + + E ++ +T N E+
Sbjct: 715 ATENSPEEASVDNQQPIQEQHIELIGSGGECQGEPESLTGLVHQERQATKNSLEEASVDN 774
Query: 870 HAQDQESETELMDSESEA 887
QE EL+D+ E
Sbjct: 775 QQPIQEQHIELIDTGEEC 792
>gi|30678323|ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana]
gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana]
gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
Length = 1011
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 313/793 (39%), Positives = 452/793 (56%), Gaps = 90/793 (11%)
Query: 143 STMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARG 202
S + +I EKL+ G+V + D+ RR G+E K S +IF LP R
Sbjct: 58 SAIQRIAEKLRSLGFVEEKH-----DSPTRRITGEES--GKNSPGEIFVPLPKQLPIHRV 110
Query: 203 GFSKES-------PL---GLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAEL 252
G + ++ P+ G G + E+K W+K E K+ SLAEL
Sbjct: 111 GHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMER------KKEEKVPSLAEL 164
Query: 253 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKR 312
TLP +ELRRLR + + K +I AG+T+ +V+ IHE+W+T+E+V++ E +NMKR
Sbjct: 165 TLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKR 224
Query: 313 MHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQA------ 366
H++LE KTGGLVIWRSG+ + LYRGV+Y+ P ++ + ASS+ Q
Sbjct: 225 THDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSRE 284
Query: 367 ------------TDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYT 414
T+K + ++ V + ++ EV+ +E ++LL+GLGPR+T
Sbjct: 285 KQSIAESSAPSITNKMVKPMLTQGVG---SPDKVRFQLPGEVQLVEEADRLLEGLGPRFT 341
Query: 415 DWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGR 474
DW DPLPVD D+LP +VP Y+ PFR+LPYGV L E T ++RL R LP HFALGR
Sbjct: 342 DWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGR 401
Query: 475 SRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFY 534
+R LQGLAVA++KLWEK +AKIA+KRGVQ T SE M E++K LTGGTL+SR+KDF+V Y
Sbjct: 402 NRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLY 461
Query: 535 RGKNFLSPDVTEALQERERL----------AKSLQDEEEQARLRASAFVLPSIETIEKSG 584
RGK+FL V+ A++ER R L + EE+ + RA
Sbjct: 462 RGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRA--------------- 506
Query: 585 TAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERA 644
+KE ++ ++ K +H+ ++ + +++K KL+ A K AE+
Sbjct: 507 ----VKEDIELEAKDQKDHIQTHQ---MKSRQRNSPEAILEKTSMKLSMALEKKANAEKV 559
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L+ +E P D E IT++E++M RK+GL+MK FLLLGRRGVFDGT+ENMHLHWKY
Sbjct: 560 LADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKY 619
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPK 764
RELVKII + + A K+A LEAESGG+LV+V+ +SKGYA++VYRGK+Y+RP LRP+
Sbjct: 620 RELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQ 679
Query: 765 NLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSA 824
LL+KR+AL RS+E QR+++L HV L +N L ++ + ++ T + +
Sbjct: 680 TLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESSNMMVE 739
Query: 825 YATEDDDSEDE--------GDEAYLEMYAGG-----NDNEDEIDN-STHNLEMESDFPYH 870
TE+ +E E G + L + + G +D+E E+D +T + E + D
Sbjct: 740 EETENQHTEPEKAREKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQEYQEDESES 799
Query: 871 AQDQESETELMDS 883
A Q E +DS
Sbjct: 800 ASSQRHEGNSLDS 812
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 451 LARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSER 510
+ RK+A +++ P FA+GRS + GLA + ++K+ +A + +K T+ +
Sbjct: 882 ILRKQALKMKKR-----PPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQE 936
Query: 511 MVEDIKKLTGGTLLSRNKDFLVFYRG 536
++ +K+ TG L+S+ ++ YRG
Sbjct: 937 VIAKLKEETGALLVSQEPSKVILYRG 962
>gi|255552728|ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
gi|223543418|gb|EEF44949.1| conserved hypothetical protein [Ricinus communis]
Length = 1009
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/609 (45%), Positives = 382/609 (62%), Gaps = 45/609 (7%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
G + + +++V + R KR + +LAEL+L E ELRRLR + K K ++ AG
Sbjct: 124 GNAILRYHELRKQVKKEREDKKREAKVPTLAELSLSEEELRRLRRIGIAEKRKLKVGKAG 183
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
+T+ +V+ IHE+W+ SE+V++ E +NMKR H++LERKTGGLV+WR+G+ + LYRGV
Sbjct: 184 ITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRTHDLLERKTGGLVVWRAGSKIVLYRGV 243
Query: 340 SYEVP------------SVQLNKRIYKRNEL-----PASSV-------SQATDKQIHKQI 375
+Y P S+ + +K N+ +SSV T+K + +
Sbjct: 244 NYIYPYFLSDNTTENDTSIDAVQDTHKHNDSDKIKSCSSSVDGVKFSGPSPTNKAVRPAL 303
Query: 376 SMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPG 435
V L Q E + +EV+ LL+GLGPR++DW G +PLPVDAD+LP IVPG
Sbjct: 304 IQGVGLPNRVRFQ---LPGEAQLAEEVDSLLEGLGPRFSDWWGYEPLPVDADLLPAIVPG 360
Query: 436 YQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
YQ PFR+LPYG++ L E T L+RL R LP HF LGR+R+LQGLA ++IKLWEK IA
Sbjct: 361 YQKPFRLLPYGIKPILTNDEMTTLKRLGRPLPCHFVLGRNRKLQGLAASIIKLWEKCEIA 420
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERE--- 552
KIA+KRGVQ T SE M E++K+LTGGTLLSR+++F+V YRGK+FL V+ A++ER
Sbjct: 421 KIAVKRGVQNTNSEMMAEELKRLTGGTLLSRDREFIVLYRGKDFLPSAVSSAIKERRNHV 480
Query: 553 -RLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENL 611
+AK D A A E +E + ++ N+ L K +
Sbjct: 481 FNVAKERTDNSTSAETAKEA------EDVEDGTSNSGSQDEFHGNNEQSYDLSKQRKLSF 534
Query: 612 VREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFM 671
+EA R L LEKK +A + L+++E S + + D E ITDEER+M
Sbjct: 535 TKEAIKRTSIRLSMALEKK--------AKAVKLLAEIENSEMSQQPEIDKEGITDEERYM 586
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
RK+GL+MK FLL+GRRGVFDGT+ENMHLHWKYRELVKII K ++ + ++A +LEAES
Sbjct: 587 LRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKERSLNAVHEVAQSLEAES 646
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVAT 791
GG+LV+V+++SKGYA+VVYRGK+YQRP+ LRP LL+KR+A+ RS+E QR+E+L HV
Sbjct: 647 GGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMKRSLEAQRRESLKLHVLR 706
Query: 792 LESNAGRLR 800
L N L+
Sbjct: 707 LTRNINDLK 715
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 656 ERQADPESITDEERFMFRKLGLRMK--AFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 713
E Q+ +++ +R M RK L+MK L +GR + G + + H+K L + VK
Sbjct: 853 EMQSSTICLSNRDRLMLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFKKYPLAIVNVK 912
Query: 714 VKT-FDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRG 752
+ +++ LE +GGVLVS + +++YRG
Sbjct: 913 GRAKGTSVQEVVFQLEQATGGVLVSQEP----SKVILYRG 948
>gi|356527819|ref|XP_003532504.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 719
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 293/647 (45%), Positives = 397/647 (61%), Gaps = 49/647 (7%)
Query: 224 FPWEKRKEEVAE------GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKG 277
FPW+K +EE AE L K+ + ++LAE TL E ELRRLR L K K I
Sbjct: 108 FPWDKGQEEDAEEPGEQQKEMLKKKNVNASTLAEQTLVEEELRRLRTLGMSLKEKITIPK 167
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
AGLT+AV+D IH W E+VRLK A NMK H+I+E +T GLVIWRSG+ + +YR
Sbjct: 168 AGLTRAVLDRIHRHWSNCELVRLKFHEFLAQNMKLAHQIVEHRTRGLVIWRSGSYMWVYR 227
Query: 338 GVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVK 397
G +Y+ P E A+S + K ++ E + E
Sbjct: 228 GKNYQGPV-----------ESDATS--------MEKSEAVWWKGENMTPE---------- 258
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
E E ++LDG GPR+ +W G LPVDAD LP +VPGY+ P R+LP G+R L E T
Sbjct: 259 -EAEFNRMLDGFGPRFVEWWGTGILPVDADSLPPMVPGYKTPLRLLPAGMRPQLTNDELT 317
Query: 458 NLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKK 517
N+++LA+ LP HFALGR+R LQGLA A+++LWEKS +AKI +KRG+ T +E M +++K
Sbjct: 318 NMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNELMAQELKA 377
Query: 518 LTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI 577
LTGGTLL RNK ++V YRGK+F+ V + ER+ L K +QD EE+ R +A PS
Sbjct: 378 LTGGTLLLRNKYYIVIYRGKDFVPTSVAAVIAERQELTKQVQDVEEKVRCKALDST-PSG 436
Query: 578 ETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERK 637
E E + AG+L E A + WG+ + +E +++E ++A LV+K+E KLA A+ K
Sbjct: 437 ED-ESTAQAGSLAEFYVAQACWGRDISTEERERMMQEVAKAKNAKLVKKIECKLAVAQAK 495
Query: 638 LLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVEN 697
LRAE+ L+K+E SL P D E+ITDEER MFR +GLRMKA+L LG RGVFDG +EN
Sbjct: 496 RLRAEKLLAKIEASLLPVGPDYDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIEN 555
Query: 698 MHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQR 757
MHLHWK+RELVK+I K KT + A LE ESGG+LV++DK+ KG++++ YRGK+Y+R
Sbjct: 556 MHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGKNYRR 615
Query: 758 PSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDE-Q 816
P TLRP+NLLTK KAL RS+ +QR EAL +HV L ++ ++ ++ GT D
Sbjct: 616 PMTLRPRNLLTKAKALQRSVVMQRHEALSQHVTELGEKIEEMKKKL-GLSQDLGTKDRWN 674
Query: 817 LYDKLDSAYATEDDDSEDE---GDEAYLEMYAGGNDNEDEIDNSTHN 860
+ D + +E SE+E GD+ GN N+DE N
Sbjct: 675 VEDHNQIDHISEFTQSEEEYSDGDD------TDGNFNDDEYSECNDN 715
>gi|297803062|ref|XP_002869415.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
gi|297315251|gb|EFH45674.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
Length = 775
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/609 (47%), Positives = 386/609 (63%), Gaps = 66/609 (10%)
Query: 235 EGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKT 294
+G W K R S T+ AE +PE ELRRLR++ + + ++ AG+TQ +V IHEKW+
Sbjct: 223 KGIW--KTRRSNTAEAERVVPEHELRRLRSVALRMVERVKVGSAGITQVLVQAIHEKWEV 280
Query: 295 SEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYK 354
E+V+LK +LNMKR HE+LE K +
Sbjct: 281 DEVVKLKFGEPFSLNMKRTHEVLENNLN--------------------------TKHVEA 314
Query: 355 RNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYT 414
R+ +P D K + +EQ ++ E+ LLD LGPR+
Sbjct: 315 RDYVPE-------DANYPKNVP---------KEQLSELC-------ELNDLLDELGPRFH 351
Query: 415 DWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGR 474
DW GC P PVDAD+LPG V GY+ PFR+LP GV+ L+ E T ++RLAR PPHFALGR
Sbjct: 352 DWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSPPHFALGR 411
Query: 475 SRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFY 534
SR+LQGLA AM+KLW KS+IAKIA+KRGV+ T +ERM E++K+LT G L+SRNK+++VFY
Sbjct: 412 SRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKEYIVFY 471
Query: 535 RGKNFLSPDVTEALQERER-LAKSLQDEEEQARLRASAFVLPSIETIEKSGT----AGTL 589
RG +F+ P V EAL ER++ + + LQ +E+Q R AS V ++ + KS AGTL
Sbjct: 472 RGNDFMPPAVAEALTERQKEITEVLQTKEDQVREMASTRV--TLTSQAKSPKTQLLAGTL 529
Query: 590 KETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVE 649
ET+ A+SRW E L RE+ + A L++ LE +L ++KL RAER L+KV+
Sbjct: 530 AETIAASSRWAPDASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAKVQ 589
Query: 650 ESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 709
+ L P+E D E+IT+EER ++RK+GL M FLLLGRR V+DGT+ENMHLHWK+RELVK
Sbjct: 590 KDLDPSELPTDSETITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVK 649
Query: 710 IIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTK 769
+IV+ K+ Q K IA++LEAESGGVLVSVDK KGY++++YRGK+YQ P LRP NLLT+
Sbjct: 650 VIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYSIILYRGKNYQMPFRLRPSNLLTR 709
Query: 770 RKALARSIELQRQEALLKHVATLESNAGRLRS--EIEQMNSVKGTGDEQ-LYDKLDSAYA 826
+KA ARSIELQR+EAL HVA LE L++ + ++ K G+E+ LY ++D
Sbjct: 710 KKAFARSIELQRREALKYHVADLEERIELLKTGQDDDREPGRKSDGEEENLYLRVD---- 765
Query: 827 TEDDDSEDE 835
E D S DE
Sbjct: 766 -ESDFSSDE 773
>gi|6692258|gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 314/802 (39%), Positives = 452/802 (56%), Gaps = 99/802 (12%)
Query: 143 STMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARG 202
S + +I EKL+ G+V + D+ RR G+E K S +IF LP R
Sbjct: 58 SAIQRIAEKLRSLGFVEEKH-----DSPTRRITGEES--GKNSPGEIFVPLPKQLPIHRV 110
Query: 203 GFSKES-------PL---GLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAEL 252
G + ++ P+ G G + E+K W+K E K+ SLAEL
Sbjct: 111 GHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMER------KKEEKVPSLAEL 164
Query: 253 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKR 312
TLP +ELRRLR + + K +I AG+T+ +V+ IHE+W+T+E+V++ E +NMKR
Sbjct: 165 TLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKR 224
Query: 313 MHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQA------ 366
H++LE KTGGLVIWRSG+ + LYRGV+Y+ P ++ + ASS+ Q
Sbjct: 225 THDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAHEAASGASSMDQGVVDSRE 284
Query: 367 ------------TDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYT 414
T+K + ++ V + ++ EV+ +E ++LL+GLGPR+T
Sbjct: 285 KQSIAESSAPSITNKMVKPMLTQGVG---SPDKVRFQLPGEVQLVEEADRLLEGLGPRFT 341
Query: 415 DWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGR 474
DW DPLPVD D+LP +VP Y+ PFR+LPYGV L E T ++RL R LP HFALGR
Sbjct: 342 DWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGR 401
Query: 475 SRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED---------IKKLTGGTLLS 525
+R LQGLAVA++KLWEK +AKIA+KRGVQ T SE M E+ IK LTGGTL+S
Sbjct: 402 NRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKVVGLLLVIKWLTGGTLIS 461
Query: 526 RNKDFLVFYRGKNFLSPDVTEALQERERL----------AKSLQDEEEQARLRASAFVLP 575
R+KDF+V YRGK+FL V+ A++ER R L + EE+ + RA
Sbjct: 462 RDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRA------ 515
Query: 576 SIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAE 635
+KE ++ ++ K +H+ ++ + +++K KL+ A
Sbjct: 516 -------------VKEDIELEAKDQKDHIQTHQ---MKSRQRNSPEAILEKTSMKLSMAL 559
Query: 636 RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 695
K AE+ L+ +E P D E IT++E++M RK+GL+MK FLLLGRRGVFDGT+
Sbjct: 560 EKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTI 619
Query: 696 ENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
ENMHLHWKYRELVKII + + A K+A LEAESGG+LV+V+ +SKGYA++VYRGK+Y
Sbjct: 620 ENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNY 679
Query: 756 QRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDE 815
+RP LRP+ LL+KR+AL RS+E QR+++L HV L +N L ++ + ++ T +
Sbjct: 680 ERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSD 739
Query: 816 QLYDKLDSAYATEDDDSEDE--------GDEAYLEMYAGG-----NDNEDEIDN-STHNL 861
+ TE+ +E E G + L + + G +D+E E+D +T +
Sbjct: 740 GESSNMMVEEETENQHTEPEKAREKIELGYSSDLSVPSSGEENWEDDSEGEVDPLTTSSQ 799
Query: 862 EMESDFPYHAQDQESETELMDS 883
E + D A Q E +DS
Sbjct: 800 EYQEDESESASSQRHEGNSLDS 821
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 451 LARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSER 510
+ RK+A +++ P FA+GRS + GLA + ++K+ +A + +K T+ +
Sbjct: 891 ILRKQALKMKKR-----PPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQE 945
Query: 511 MVEDIKKLTGGTLLSRNKDFLVFYRG 536
++ +K+ TG L+S+ ++ YRG
Sbjct: 946 VIAKLKEETGALLVSQEPSKVILYRG 971
>gi|357128578|ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/571 (46%), Positives = 370/571 (64%), Gaps = 13/571 (2%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
++R SLAELT+ ++ELRRLR + + + + AG+TQAV + IH+ W+ SE+VRL
Sbjct: 167 RKRVKAPSLAELTMDDAELRRLRGMGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRL 226
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP--SVQLNKRIYKRNE- 357
K A +MK HE++ER+TGGL+IWR+G+ + +YRG +Y P S L+ R
Sbjct: 227 KFHEDLANDMKTAHELVERRTGGLIIWRAGSVMVVYRGNNYTRPTKSQTLDGTSSTRKGE 286
Query: 358 -----LPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPR 412
+P +S D Q + NL + D E E E ++LD LGPR
Sbjct: 287 DNTLFIPDASSPAENDNQGKDLTAQHDNLSRLNIHNTDDMTEE---ELEFNQMLDELGPR 343
Query: 413 YTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFAL 472
+ DW G LPVDAD+LP +PGY+ PFR+LP G+R++L E TNL++LAR LP HFAL
Sbjct: 344 FVDWWGTGILPVDADLLPQTIPGYKAPFRLLPTGMRTSLTNAELTNLRKLARSLPCHFAL 403
Query: 473 GRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLV 532
GR+R QGLA A+IKLWEKS + KIA+KRG+Q T +E M ++IKKLTGGTLL RNK F+V
Sbjct: 404 GRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQNTNNELMSDEIKKLTGGTLLLRNKYFIV 463
Query: 533 FYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKET 592
YRGK+FL V AL ERE L K +Q+ EEQ R + + + GTL E
Sbjct: 464 IYRGKDFLPQSVAVALAEREELTKDIQNVEEQRR--CTPIAHSPEDGFDGHALVGTLAEF 521
Query: 593 LDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESL 652
+A +RWG+ + +E + + + ++LE KL+ A+ K+ RA + LSK+E S+
Sbjct: 522 QEAQARWGRDVTSKEQEEMKEASSRLEKEKIFRRLEHKLSIAQAKIHRAGKLLSKIEASM 581
Query: 653 KPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIV 712
A D E ITDEER +FR++GL+MKA+L +G RGVFDG +ENMHLHWK+RE+VK+I
Sbjct: 582 ILANPSDDREMITDEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLIT 641
Query: 713 KVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKA 772
K KT + A LE ESGG+LV+V+++ KGYA++ YRGK+Y+RP +RP+NLLTK KA
Sbjct: 642 KQKTLAFVNETARLLEYESGGILVAVERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKA 701
Query: 773 LARSIELQRQEALLKHVATLESNAGRLRSEI 803
L R++ +QR EAL +H+A LESN +++ ++
Sbjct: 702 LKRAVAMQRHEALSQHIAQLESNMKQMKFDL 732
>gi|326507446|dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/594 (45%), Positives = 380/594 (63%), Gaps = 18/594 (3%)
Query: 221 EVKFPWEKRKEEVAEGRWLVKRRSSRT-SLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
E PWE+ +E E VKR+ R SLAELT+ + ELRRLR + K + + AG
Sbjct: 143 EAVLPWERDRESDGEEVDGVKRKRVRAPSLAELTMDDVELRRLRGMGMTLKDRITVPKAG 202
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
+TQA+ + IH+ W+ SE+VRLK A +MK HE++ER+TGGL+IWR+G+ + +YRG
Sbjct: 203 VTQAITEKIHDAWRKSELVRLKFHEDHANDMKTAHELVERRTGGLIIWRAGSVMVVYRGS 262
Query: 340 SYEVP--SVQLNKRIYKRNE------LPASSVSQATDKQIHKQISMSVNLETASEEQETD 391
+Y P S L+ R + +P S + D Q + N D
Sbjct: 263 NYTRPLKSQTLDGTSSPRKQEDSALFIPNGSSTVENDNQGKDLAAQHDNAPILDLHNTED 322
Query: 392 FVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTL 451
E E E ++LD LGPR+ DW G LPVDAD+LP +PGY+ PFRVLP G+R++L
Sbjct: 323 MTEE---ELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKAPFRVLPTGMRTSL 379
Query: 452 ARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERM 511
E TNL++LAR LP HFALGR+R QGLA A++KLWEKS + KIA+KRG+Q T ++ M
Sbjct: 380 TNSELTNLRKLARNLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLM 439
Query: 512 VEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASA 571
++IK LTGGTLL RNK ++V YRGK+FL V AL ERE L K +Q+ EEQ R S
Sbjct: 440 SDEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNLEEQRR---SI 496
Query: 572 FVLPSIET-IEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHA-YLVQKLEK 629
+ S E E GTL E +A +RWG+ + ++ + +EA R L ++LE
Sbjct: 497 SIEHSPEDGFEGHALVGTLAEFQEAQARWGRNVTSKEQQEM-KEASFRSEKEKLFRRLEH 555
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL+ A+ K+ RA + LSK+E S+ A D E IT EER +FR++GL+MKA+L +G RG
Sbjct: 556 KLSIAQAKIHRAGKLLSKIEASMVLANPSDDREMITAEERSVFRRIGLKMKAYLPVGIRG 615
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
VFDG +ENMHLHWK+RE+VK+I K KT ++ A LE ESGG+LV+++++ KG+A++
Sbjct: 616 VFDGVIENMHLHWKHREVVKLITKQKTLAFVEETARLLEYESGGILVAIERVPKGHALIF 675
Query: 750 YRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YRGK+Y+RP +RP+NLLTK KAL R++ +QR EAL +H+ LE N +++ ++
Sbjct: 676 YRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLEINMKQMKRDL 729
>gi|222632479|gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
Length = 601
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/587 (45%), Positives = 376/587 (64%), Gaps = 45/587 (7%)
Query: 270 KSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRS 329
+ + + AG+TQAV + IH+ W+ SE+VRLK A +MK HE++ER+TGGL+IWRS
Sbjct: 4 RDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRS 63
Query: 330 GTAVSLYRGVSYEVP----SVQLNKRIYKRNE----LPASSV-----SQATDKQIHKQIS 376
G+ + +YRG +Y+ P ++ N K + +P +S SQ D ++I+
Sbjct: 64 GSVMVVYRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIA 123
Query: 377 MSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGY 436
+N++ + E + E ++LD LGPR+ DW G LPVDAD+LP +PGY
Sbjct: 124 ARLNMQNTEDMTEEEL--------EFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGY 175
Query: 437 QPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAK 496
+ PFR+LP G+R TL E TNL++LAR LP HFALGR+R QGLA A++KLWEKS + K
Sbjct: 176 KTPFRLLPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVK 235
Query: 497 IALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAK 556
IA+KRG+Q T ++ M E+IK LTGGTLL RNK ++V YRGK+FL V AL ERE L K
Sbjct: 236 IAVKRGIQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTK 295
Query: 557 SLQDEEEQARLRASAFVLPSIETIEKS----GTAGTLKETLDANSRWGKRLDDSHKENLV 612
+Q+ EEQ R +P + +++ S AGTL E +A +RWG+ + +E +
Sbjct: 296 DIQNVEEQKR------CIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMK 349
Query: 613 REAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMF 672
+ L ++LE KL+ A+ K+ RAER LSK+E S+ A D E ITDEER +F
Sbjct: 350 EASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVF 409
Query: 673 RKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESG 732
R++GLR+KA+L +G RGVFDG +ENMHLHWK+RE+VK+I K KT ++ A LE ESG
Sbjct: 410 RRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESG 469
Query: 733 GVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATL 792
G+LV++++++KGYA++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR EAL +H+A L
Sbjct: 470 GILVAIERVTKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAEL 529
Query: 793 ESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEA 839
E+N I QM G ++D Y + DSE+E +EA
Sbjct: 530 ENN-------IRQMKLDLGI-------EVDEEYEEDGSDSENENNEA 562
>gi|5123569|emb|CAB45335.1| putative protein [Arabidopsis thaliana]
gi|7269874|emb|CAB79733.1| putative protein [Arabidopsis thaliana]
Length = 776
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 282/612 (46%), Positives = 382/612 (62%), Gaps = 75/612 (12%)
Query: 235 EGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKT 294
+G W + R S T AE +PE EL+RLRN+ + + ++ AG+TQA+V+ IHEKW+
Sbjct: 227 KGIW--RTRKSNTVEAERIVPEHELKRLRNVALRMVERVKVGSAGITQALVEAIHEKWEV 284
Query: 295 SEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYK 354
E+V+LK +LNMKR HE+LE
Sbjct: 285 DEVVKLKFSEPYSLNMKRTHEVLE------------------------------------ 308
Query: 355 RNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYED-----EVEKLLDGL 409
N L A + +IH+ + ++ ++ ++ + V E E+ LLD +
Sbjct: 309 -NNLEA-------NPEIHRSVEARDYVQ-----EDGNYPKNVPKEQLSELCELNDLLDEV 355
Query: 410 GPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPH 469
GPR+ DW GC P PVDAD+LPG V GY+ PFR+LP GV+ L+ E T ++RLAR PPH
Sbjct: 356 GPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSPPH 415
Query: 470 FALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKD 529
FALGRSR+LQGLA AM+KLW KS+IAKIA+KRGV+ T +ERM E++K+LT G L+SRNK+
Sbjct: 416 FALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKE 475
Query: 530 FLVFYRGKNFLSPDVTEALQERER-LAKSLQDEEEQARLRAS--AFVLPSIETIEKSGTA 586
++VFYR V EAL ER++ + + LQ +E+QAR AS A + ++ + A
Sbjct: 476 YIVFYR--------VAEALTERQKEITEVLQAKEDQAREMASTRATLTSQAKSPKTQLLA 527
Query: 587 GTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALS 646
GTL ET+ A+SRW E L RE+ + A L++ LE +L ++KL RAER L+
Sbjct: 528 GTLAETIAASSRWAPNASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLA 587
Query: 647 KVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRE 706
KV++ L P+E D E IT+EER ++RK+GL M FLLLGRR V+DGT+ENMHLHWK+RE
Sbjct: 588 KVQKDLDPSELPTDSEIITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRE 647
Query: 707 LVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNL 766
LVK+IV+ K+ Q K IA++LEAESGGVLVSVDK KGYA+++YRGK+YQ P LRP NL
Sbjct: 648 LVKVIVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNL 707
Query: 767 LTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQ---LYDKLDS 823
LT++KA ARSIELQR+EAL HVA LE L++ + + DE+ LY ++D
Sbjct: 708 LTRKKAFARSIELQRREALKYHVADLEERIELLKTGQDDDMETRNKSDEEEENLYLRVD- 766
Query: 824 AYATEDDDSEDE 835
E D S DE
Sbjct: 767 ----ESDFSSDE 774
>gi|224059986|ref|XP_002300024.1| predicted protein [Populus trichocarpa]
gi|222847282|gb|EEE84829.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/647 (42%), Positives = 395/647 (61%), Gaps = 48/647 (7%)
Query: 188 DIFYVEEGLLPNARGGFSKESPLGLGEE---VGSDGEVKFPWEKRKEEVAEGRWLVKRRS 244
+IF LP R G + + E V G+ + + + EV R K +
Sbjct: 93 EIFVPLPNRLPKYRVGQTLDPSWSTPENPVPVPGSGKAISRYHELRREVKREREAKKGEA 152
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SLAEL+LP ELRRLR + K K ++ AG+T+ +V+ IHE+W+ SE+V++ E
Sbjct: 153 KVPSLAELSLPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCED 212
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVS 364
+NMKR H++LERKTGGLV+WR G+ + LYRG Y+ P A
Sbjct: 213 LCRMNMKRTHDLLERKTGGLVVWRVGSKIVLYRGADYKYPYFLAETSSVNETSPDAVQNI 272
Query: 365 QATDKQIHKQISM--SVNLETASEEQETD-FVR-------------------EVKYEDEV 402
DK++ ++ S+ +V+ E + +D VR E + +E
Sbjct: 273 DVDDKEVDEEGSVLSAVDGAAPPEPRSSDEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEA 332
Query: 403 EKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRL 462
++LLDGLGPR+ DW G DPLPVDAD+LP +V GY+ PFR+LPYGV TL E T L+RL
Sbjct: 333 DQLLDGLGPRFNDWWGYDPLPVDADLLPAVVSGYRRPFRLLPYGVSPTLTNDEMTTLKRL 392
Query: 463 ARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGT 522
R LP HFALGR+ + QGLA +++KLWEK IAKIA+KRGVQ T SE M +++K LTGGT
Sbjct: 393 GRPLPCHFALGRNTKHQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAQELKWLTGGT 452
Query: 523 LLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEK 582
LLSR+++F+V YRGK+FL V+ A+++R + D +++ + I
Sbjct: 453 LLSRDREFIVLYRGKDFLPSAVSSAIEDRRKRG----DMDKRW-----------TDCITS 497
Query: 583 SGTAGTLKE----TLDANSRWGKRLDDSH--KENLVREAEVRRHAYLVQKLEKKLARAER 636
+ T+ LK+ T +A SR +DD++ K +L +R +++ KL+ A
Sbjct: 498 NETSEELKDRSWRTTNAKSR--DEIDDTNDRKHDLSENKNLRSTDAAIKRTSIKLSMALE 555
Query: 637 KLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 696
K +AE+ LS++E+S + + D E IT+EER+M RK+GL+MK FLL+G RGVFDGT+E
Sbjct: 556 KKAKAEKLLSELEKSEMSQQPEKDKEGITEEERYMLRKIGLKMKPFLLMGERGVFDGTIE 615
Query: 697 NMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
NMHLHWKYRELVKII K K+F + +A LEAESGG+LV+V+ +SKGYA+++YRGK+Y
Sbjct: 616 NMHLHWKYRELVKIICKEKSFQAVQAVARTLEAESGGILVAVEGVSKGYAIILYRGKNYT 675
Query: 757 RPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
RP+ LRP LL+KR+A+ RS+E QR+E+L HV L SN L+ ++
Sbjct: 676 RPACLRPPTLLSKRQAMKRSLEAQRRESLKLHVLRLTSNIDHLKLQL 722
>gi|255582755|ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/544 (48%), Positives = 363/544 (66%), Gaps = 14/544 (2%)
Query: 248 SLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPA 307
+LAELT+ + ELRRLR + + + + AGLT+ VV+ IH+KW+ +E+VRLK A
Sbjct: 204 TLAELTIEDEELRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLA 263
Query: 308 LNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQAT 367
+MK HEI ER+TGGLVIWR+G+ + +YRG SYE P + + + L VS A
Sbjct: 264 HDMKTAHEITERRTGGLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAG 323
Query: 368 DKQIHKQISMSVNLETASEEQETDFVREVKY-----EDEVE--KLLDGLGPRYTDWPGCD 420
+ + N+ ++ E+ +R + + E+E+E LD LGPR+ +W G
Sbjct: 324 SETMKGD-----NVAPSAAEKRELAMRRLDHSKDMTEEEIEYDSFLDSLGPRFEEWWGTG 378
Query: 421 PLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQG 480
LPVDAD+LP +P Y+ PFR+LP G+RS L E TNL++LA+ LP HFALGR+R QG
Sbjct: 379 ILPVDADLLPPKIPDYKTPFRLLPTGMRSRLTNAEMTNLRKLAKKLPCHFALGRNRNHQG 438
Query: 481 LAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFL 540
LA ++K+WEKS +AKIA+KRG+Q T ++ M +++K LTGG LL RNK ++V YRGK+FL
Sbjct: 439 LASTILKVWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIYRGKDFL 498
Query: 541 SPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWG 600
V AL ER+ L K +QD EE+ R R V PS E E AGTL E +A SRWG
Sbjct: 499 PTSVAAALTERQELTKKIQDVEEKVRSREIEAV-PSKEE-EGKPLAGTLAEFYEAQSRWG 556
Query: 601 KRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQAD 660
K +E ++ + + A +V+++E KLA A+ K LRAER L+K+E S+ P+ D
Sbjct: 557 KDTSAEDREKMIEDDTRAKRARIVKRIEHKLAVAQAKKLRAERLLAKIEVSMLPSGPDYD 616
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
E+ITDEER +FR++GLRMKA+L LG RGVFDG +ENMHLHWK+RELVK+I K KT A
Sbjct: 617 QETITDEERAVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFA 676
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 780
+ A LE ESGG+LV+++++ KG+A++ YRGK+Y+RP LRP+NLLTK KAL RS+ +Q
Sbjct: 677 EDTARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQ 736
Query: 781 RQEA 784
R E
Sbjct: 737 RHEV 740
>gi|357500379|ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355495493|gb|AES76696.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 275/630 (43%), Positives = 396/630 (62%), Gaps = 42/630 (6%)
Query: 209 PLGLGEEVGSDGEVKFPWEKRKEEVAEGRWL----------VKRRSSRT-SLAELTLPES 257
P L +E D ++ PW ++EE E R + K+R+ + SLAELTL +
Sbjct: 159 PDVLLDEEDEDEKMVVPW--KREEEREMRSIDSGGGIKEEGFKKRTLKAPSLAELTLEDE 216
Query: 258 ELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEIL 317
LRRLR + + + AGLTQ V++ IHE W+ E+VRLK A NM+ H+I+
Sbjct: 217 LLRRLRREGMHLRERVSVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAKNMRIAHQIV 276
Query: 318 ERKTGGLVIWRSGTAVSLYRGVSYEVP-SVQLNKRI---YKRNELPASSVSQATDKQI-- 371
ER+TGGLV WR+G+ + +YRG +Y+ P S +L+ + + ++ + S+S+ D
Sbjct: 277 ERRTGGLVTWRAGSVMIVYRGKNYQGPASPELDVKEGDGFFVPDVSSGSLSKTKDSNATS 336
Query: 372 ----HKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDAD 427
+Q+ +V L E+E ++ LLD LGPR+ W G PVDAD
Sbjct: 337 SLENSEQVGRNVELPEKMTEEEAEY----------NALLDDLGPRFVGWWGTGIPPVDAD 386
Query: 428 MLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIK 487
+LP VPGY+ P+R+LP G+RS L E T+L+++A+ LP HFALGR+R QGLA A++K
Sbjct: 387 LLPREVPGYKTPYRLLPTGMRSRLTGAEMTDLRKIAKSLPCHFALGRNRNHQGLACAILK 446
Query: 488 LWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEA 547
LWE+S IAKIA+K G+Q T ++ M +++ LTGGTLL RN+ ++V YRGK+F+ V
Sbjct: 447 LWERSLIAKIAVKPGIQNTNNKLMADELSTLTGGTLLLRNRFYIVIYRGKDFVPTGVAAV 506
Query: 548 LQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSH 607
L ER+ L K +QD EE+ R +A PS++ E + AG+L E +A +RWG+ +
Sbjct: 507 LAERQELTKQVQDVEEKVRCKA-VVATPSVQG-EATAPAGSLAEFYEAQARWGRDVSSEE 564
Query: 608 KENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDE 667
E +++EA ++ LV+++E K++ A KL RAER L+K+E S+ P D E+ITDE
Sbjct: 565 HERMIKEATKAKNVKLVKQIEHKISLAANKLHRAERLLAKIESSMVPVGPDYDQETITDE 624
Query: 668 ERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALAL 727
ER +FR++GLRMKA+L LG RGVFDG +ENMHLHWK+RELVK++ K K + A L
Sbjct: 625 ERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHLHWKHRELVKLVTKQKNRAFVEDTARLL 684
Query: 728 EAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLK 787
E ESGG+LV+++K+SK +A++ YRGK+Y+RP TLRP+NLLTK KAL RS+ + R EAL
Sbjct: 685 EYESGGILVAIEKVSKEFAIIYYRGKNYKRPLTLRPRNLLTKAKALKRSVAMLRHEALSN 744
Query: 788 HVATLESNAGRLRSEIEQMNSVKGTGDEQL 817
H+ LE+ IEQM G D++L
Sbjct: 745 HITELETT-------IEQMKQELGLSDDEL 767
>gi|302805129|ref|XP_002984316.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
gi|300148165|gb|EFJ14826.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
Length = 692
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 279/644 (43%), Positives = 396/644 (61%), Gaps = 24/644 (3%)
Query: 204 FSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLR 263
FS+ S L + G FPW++ A + LAELT+PE ELRRL+
Sbjct: 32 FSESSSLEGRDSTSQQGS--FPWQRESSSEAPTPVTRPQPPKLPCLAELTIPELELRRLQ 89
Query: 264 NLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGG 323
+ + + ++ G+T+AVV IH +W+ E+V+++ +G A+NMK+ H+ LE KTGG
Sbjct: 90 RIAIRVVNPIKVGYLGVTKAVVQDIHRRWQKCEVVKIQCDGPAAINMKQTHDELETKTGG 149
Query: 324 LVIWRSGTAVSLYRGVSYEV---PSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVN 380
LV+WR+G LYRG Y S+ N + Y+R ++ + D+ + S S +
Sbjct: 150 LVVWRTGGMAILYRGKGYFARVDNSMVANLKKYQRRKINLMEAIKIRDEDEDRDYSQSEH 209
Query: 381 LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPF 440
E + ++ + E +Y DE++ LL+ LGPRY DW G P+PVD D+LP VPGY+PP
Sbjct: 210 GEARRDSEKGNI--EDEYLDEIDALLEELGPRYDDWIGRKPVPVDGDLLPASVPGYKPPL 267
Query: 441 RVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALK 500
R+LPY + L+ E T L+RL + LPPHF LGR+R LQGLA A++KLW+KS + KI LK
Sbjct: 268 RMLPYRAKKNLSNMELTVLRRLVKPLPPHFVLGRNRGLQGLASAILKLWQKSELVKIGLK 327
Query: 501 RGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQD 560
RGVQ T ++ M E++++LTGG LLSR+K F+ YRGK+FL V L+ERE + L
Sbjct: 328 RGVQNTRNQLMAEELERLTGGVLLSRDKFFITLYRGKDFLPTSVAAVLRERESNMRELLL 387
Query: 561 EEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRW----GKRLDDSHKENLVREAE 616
+E+Q R+ A + +G+L E+++ +W ++ D+ + V +
Sbjct: 388 KEDQVRIPAQI----GDGQNRTTPVSGSLSESMEMRRQWEAQRSEKDDEMDRNAAVVALK 443
Query: 617 VRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLG 676
VR ++LE KLA A K RA+ + K+E SL +E D E+IT+EER+MF+KLG
Sbjct: 444 VREQ----KRLEAKLAAAISKKRRADLQIVKLERSLLLSEHPRDRETITEEERYMFKKLG 499
Query: 677 LRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLV 736
LRM AFLL+GRRGVFDG +ENMHLHWK+RELVK+I+K K A ++A LE ESGG+LV
Sbjct: 500 LRMDAFLLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAIALEVAKMLEIESGGILV 559
Query: 737 SVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNA 796
V SKG A++VYRGK+YQRP+ LRP++LLTKRKALARS E+QR++AL H+ LE
Sbjct: 560 GVVTTSKGQAIIVYRGKNYQRPAELRPRSLLTKRKALARSKEIQRKKALQLHIEKLEELI 619
Query: 797 GRLRSEIEQMNSVK---GTGDEQLY--DKLDSAYATEDDDSEDE 835
+LR + + K DE Y D LDS +++ +SE E
Sbjct: 620 MKLRKDYLLADRKKLHHDDDDEMAYSDDLLDSEISSDGSESEAE 663
>gi|356573410|ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1028
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 295/737 (40%), Positives = 431/737 (58%), Gaps = 79/737 (10%)
Query: 197 LPNARGGFSKE----SPL------GLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSR 246
LP R G + E +PL G G S EV+ + R EE + LV
Sbjct: 87 LPKRRVGHTFEPSWSTPLNPVPVPGSGIAALSKSEVRRQKKLRAEESRRRKELV------ 140
Query: 247 TSLAELTLPESELRRLRNLTFQT-KSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGA 305
+LAEL+LP+SE+RRL L F T K K R+ AG+T+ +VD+IHE+WK SE+VR+ E
Sbjct: 141 PTLAELSLPDSEIRRLTTLGFSTTKKKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEEL 200
Query: 306 PALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQ 365
+M+R H++LERKTGGLV+WRSGT + LYRG Y+ P L+ ++ +++ ++
Sbjct: 201 SRDDMRRTHDLLERKTGGLVVWRSGTKIILYRGADYKYPYF-LSDKVTRQDNTSNDALQH 259
Query: 366 --ATDK-------QIHKQISMSVNLETASEEQE----------TDFVR-----EVKYEDE 401
A DK + ++ S++ +E ++ E + VR E + ++
Sbjct: 260 VNADDKYCDKSESHLSEKNSVACAVENSNAETAKPALILGVGTPNKVRFQLPDEAELAED 319
Query: 402 VEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQR 461
+ LL GLGPR+TDW G DPLPVDAD+LP ++ GY+ PFR+LPYGV L E T L+R
Sbjct: 320 TDCLLTGLGPRFTDWWGGDPLPVDADLLPAVIHGYRKPFRLLPYGVNPKLTDDEMTTLKR 379
Query: 462 LARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGG 521
L + LP HFALGR+R+LQGLA A+IKLWE+ I KIA+KRGVQ T+S+ M +++K LTGG
Sbjct: 380 LGKPLPCHFALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTSSKIMAKELKHLTGG 439
Query: 522 TLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIE 581
LLSR+++F VFYRGK++L V+ A++++ + +L+ + ++
Sbjct: 440 ILLSRDREFFVFYRGKDYLPAAVSSAIKKQRNIG--------MYKLKFGNSLSATVTPNP 491
Query: 582 KSGTAGTLKETLDANSRW-GKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLR 640
K G T++ NS G K+ ++ +AE +++ KL+ A K +
Sbjct: 492 KDG-------TIECNSEVKGMNFQKDTKQRMLTKAE-----EAIKRTSIKLSMALEKKAK 539
Query: 641 AERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHL 700
AE+ L K+ + P E++ D E I+ EE++M R++GL MK FLLLGRRGVFDGTVENMHL
Sbjct: 540 AEKLLEKLINAESPQEQEIDKEGISKEEKYMLRRIGLMMKPFLLLGRRGVFDGTVENMHL 599
Query: 701 HWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPST 760
HWKYRELVKII + ++ +IAL LEAESGG+LV+V+++ KG+A++VYRGK+Y P
Sbjct: 600 HWKYRELVKIICN-GSLEEVHQIALTLEAESGGILVAVERVRKGFAIIVYRGKNYSVPVC 658
Query: 761 LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI---EQMNSVKGTGDEQL 817
LRP+ LL KR+AL RSIE QR+E+L + TL+ L+ +I E+ NS + +L
Sbjct: 659 LRPQTLLNKRQALKRSIEAQRRESLKLRILTLDKEINELKLQIVEDEEANSKQMAEASRL 718
Query: 818 YDKLDSAYATED-----------DDSEDEGDEAYLEMYAGGNDNEDEIDNS-THNLEMES 865
D A + D++ E +E+ G ++ E +NS + N +E+
Sbjct: 719 DMATDEHEACSNFINWHSPKEASGDNQQAIQEEPVELIDSGGAHQGEPENSISWNSSIEA 778
Query: 866 DFPYHAQDQESETELMD 882
QE EL+D
Sbjct: 779 SIDNQQAIQEHPVELID 795
>gi|168038664|ref|XP_001771820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676951|gb|EDQ63428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1106
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 316/830 (38%), Positives = 472/830 (56%), Gaps = 95/830 (11%)
Query: 49 QNFSSNSAHEKNPPRKTCSFSTN---------NFFSQHDKDDNANLCSSSSWLVKWNKPN 99
Q +S+S K FSTN + +SQHD + N + + K N
Sbjct: 139 QRLTSSSRRGSEMEGKASHFSTNRSESPKPNTSKYSQHDTEGNMHRAPWDQGPARGAKAN 198
Query: 100 KYNRLKP-PQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYV 158
R P P+ N D AR D + GG ++M +IVEKL+ +
Sbjct: 199 PRGRRSPIPK--------NKD------ARGDRENYQGGGQR---ASMARIVEKLRA---I 238
Query: 159 GDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGS 218
G+G+ D D+ E S + + + P +S + +++GS
Sbjct: 239 GNGESATTMDFDK-----NPPATETSSF--LPRPGQAVHPGLDRRWSNSNLEQPSDDLGS 291
Query: 219 DGEVKFPWEKRKEEVAEGRWLV--KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIK 276
+FPW + E E + K+R S+AELTLPE ELRRLR L Q + + +I
Sbjct: 292 ----RFPWAMGENEEQEDHEQIEKKKRVRSPSVAELTLPEPELRRLRTLGLQLQGRLKIG 347
Query: 277 GAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLY 336
G+T +V+ IH++W+TSE+ ++K + ++NMK+ HE LER TGGLVIWR+G+A +Y
Sbjct: 348 RLGVTPGIVEAIHDRWRTSELAKVKCDAPLSMNMKKAHEDLERLTGGLVIWRAGSAAVVY 407
Query: 337 RGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEE--------- 387
RG Y P V L + + EL + + + ++++ + V +E++ EE
Sbjct: 408 RGKDYVHPFV-LER---EEKELLSLDLDEDEEQELLMEAGSEVEMESSIEECFDVTGDQS 463
Query: 388 QETDFVREVKYEDEV---EKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLP 444
E +F+ + ++ E+LLDGLGPRY DW G DP+PVD D+L ++ PFR+LP
Sbjct: 464 GEKEFLMKQGQNADLMMMEELLDGLGPRYADWKGKDPVPVDGDLLLDSEFKFKRPFRLLP 523
Query: 445 YGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQ 504
+GV+ L E T L+RLAR +PPHF LGR+R L GLA A++KLWEKS I KI +K+GVQ
Sbjct: 524 HGVKPKLNDFEMTQLRRLARPVPPHFVLGRNRGLDGLAAAIMKLWEKSEIVKIGVKKGVQ 583
Query: 505 LTTSERMVEDIK--------------KLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQE 550
T++E+M E++K +LTGGTLL+R+K+++V RGK+FL V AL+E
Sbjct: 584 NTSNEKMAEELKARITSKFPSSRITVRLTGGTLLARDKEYIVLSRGKDFLPSAVRVALEE 643
Query: 551 RERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRW--GKRLDDSHK 608
R+R+AK++Q+EEE+ RL V+ ++T GTL+E ++ + W ++ D++ K
Sbjct: 644 RDRMAKAVQEEEERIRLSGRKRVVQIVDT----SKVGTLEEAMETRAAWEGWQKSDEARK 699
Query: 609 ENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEE 668
E + R A + ++ +K+ A +K RA L+K++ P + D E +++ E
Sbjct: 700 ERIAARKAKRGQA--MDRIRQKMKLALQKKERAMAELAKIDAKTNPTDAPLDKEFLSEAE 757
Query: 669 RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALE 728
R+M+R+ GL+ K +LLLGRRGVF GTVENMHLHWK+RELVKI+VK +A++ A LE
Sbjct: 758 RYMYRQQGLKHKGYLLLGRRGVFGGTVENMHLHWKHRELVKILVKA-PIAEAQQTAKMLE 816
Query: 729 AESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKH 788
ESGG+LV + SKG A++VYRGK+YQRPS LRP++LLTKR+AL RS+E+QR ++L KH
Sbjct: 817 RESGGILVDIVNTSKGQAIIVYRGKNYQRPSELRPRHLLTKRQALKRSLEVQRMQSLEKH 876
Query: 789 VATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYAT----EDDDSED 834
+ L +EIE M + +EQ D+L++ T ED D+ D
Sbjct: 877 IQI-------LMTEIETMQAGLNKMEEQ--DELENEAGTQGNLEDFDATD 917
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 29/268 (10%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVI----WRSGTAVS 334
G+ V+ +H WK E+V++ ++ AP ++ ++LER++GG+++ G A+
Sbjct: 778 GVFGGTVENMHLHWKHRELVKILVK-APIAEAQQTAKMLERESGGILVDIVNTSKGQAII 836
Query: 335 LYRGVSYEVPSVQLNKR--IYKRNELPAS-SVSQATDKQIHKQISMSVNLETASEEQETD 391
+YRG +Y+ PS +L R + KR L S V + + H QI M+ +ET
Sbjct: 837 VYRGKNYQRPS-ELRPRHLLTKRQALKRSLEVQRMQSLEKHIQILMT-EIETMQA----- 889
Query: 392 FVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTL 451
+ +++ +DE+E G D+ D + D + G + F+ P L
Sbjct: 890 GLNKMEEQDELENEAGTQG-NLEDFDATD---FNLDNV-GKSIQVKNFFKAEP------L 938
Query: 452 ARKEATNL-QRLARVL--PPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTS 508
RK+ +L Q++ +L +F +G++ + LA ++ +K K+ +K + ++
Sbjct: 939 TRKQRQHLRQQIPLMLGRTANFNIGKTTLYEDLAKSICAYLQKHPFVKVGVKGRPKGSSV 998
Query: 509 ERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+VE I++ TG L+S L+FYRG
Sbjct: 999 ASVVEQIEEHTGAVLVSTEPSKLIFYRG 1026
>gi|356573408|ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1027
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 269/668 (40%), Positives = 394/668 (58%), Gaps = 61/668 (9%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
+R +LAEL+L ++E+RRL + K R+ AGLT+ +V+ IHE+W++ E+VR+
Sbjct: 117 RREDKVPTLAELSLSDAEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRI 176
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
E NMKR H++LERKTGGLV+WRSG+ + LYRG Y+ P +K R++
Sbjct: 177 VCEDLSRFNMKRTHDLLERKTGGLVVWRSGSKIILYRGTDYKYPYFLSDK--VSRDDNTG 234
Query: 361 SSV--------------SQATDKQIHKQISMSVNLETASEE--QETDFVREVKYE----- 399
++ S +++K S N++TA Q +V+++
Sbjct: 235 DAMQHMDEDAKNFDKRESHSSEKNSVTYAGKSSNVKTAKPALIQGVGSPNKVRFQLPGEA 294
Query: 400 ---DEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEA 456
+ + LL G+GPR+ DW G DPLPVDAD+LP ++PGY+ PFR+LPYGV+ L E
Sbjct: 295 ELAKDADSLLTGIGPRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEM 354
Query: 457 TNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIK 516
T ++RL + LP HFALGR+++L GLA A+IKLWE+ I KIA+KRGV T E M E+IK
Sbjct: 355 TTMRRLGKHLPCHFALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTNGELMAEEIK 414
Query: 517 KLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPS 576
LTGGTL++R+K+F+VFYRGK+FL V+ A+++R +S+ + + R S P
Sbjct: 415 YLTGGTLIARDKEFIVFYRGKDFLPTAVSSAIEQR----RSIGMYKLKTRNSLSVTDDPD 470
Query: 577 IETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAER 636
+ K GT E G K+ ++ EAE ++ KL+ A
Sbjct: 471 L----KDGTIECDSEVK------GMNFKKDTKQGMLTEAEA-----AIKSTSIKLSMALE 515
Query: 637 KLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 696
+ +AE+ LS++E + P E + + E IT+EE++M R++GL+M FLLLGRRGVFDGTVE
Sbjct: 516 EKAKAEKLLSELENAESPQEEEINKEGITEEEKYMLRRIGLKMSPFLLLGRRGVFDGTVE 575
Query: 697 NMHLHWKYRELVKIIV-KVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
NMHLHWKYRELVKII K + + ++IA LEAESGG+L++V++++K YA++VYRGK+Y
Sbjct: 576 NMHLHWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERVNKSYAIIVYRGKNY 635
Query: 756 QRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDE 815
RP++LRP+ LL K++AL RSIE QR E+L HV L+ N L+
Sbjct: 636 SRPASLRPRTLLNKKQALKRSIEAQRCESLKLHVLKLDRNINELK--------------H 681
Query: 816 QLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTH-NLEMESDFPYHAQDQ 874
Q+ +++ D++ E +E+ G ++ E NS + N E+ Y Q
Sbjct: 682 QMAKDMEANSKQTSVDNQQAIQEQPVELIDSGGAHQAEPGNSINWNYPKEASVDYQQTMQ 741
Query: 875 ESETELMD 882
E EL D
Sbjct: 742 EQSVELFD 749
>gi|449440945|ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 560
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/496 (50%), Positives = 331/496 (66%), Gaps = 8/496 (1%)
Query: 310 MKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPS-VQLNKRIYKRNELP-ASSVSQAT 367
MK HEI+ER+TGGLV+WRSG+ + +YRG +YE PS ++ R +P SS + +T
Sbjct: 1 MKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPSKIKPLTRDGDGVFIPDVSSATTST 60
Query: 368 DKQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDAD 427
+ + + E E E +LLDGLGPR+ +W G LPVDAD
Sbjct: 61 SDNVAASVPEKTMMPIGPPMSNEGLSEE---EAEYNQLLDGLGPRFVEWWGTGVLPVDAD 117
Query: 428 MLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIK 487
LP +PGY+ PFR+LP G+RS L E T +++LA+ LP HFALGR+R QGLAVA++K
Sbjct: 118 QLPPSIPGYKTPFRLLPTGMRSRLTNAEMTQMRKLAKSLPCHFALGRNRNHQGLAVAILK 177
Query: 488 LWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEA 547
LWEKS + KIA+KRG+Q T ++ M E+I LTGG LL RNK F+V YRGK+FL P V A
Sbjct: 178 LWEKSLVVKIAVKRGIQNTNNKLMAEEIGNLTGGVLLLRNKYFIVIYRGKDFLPPSVAVA 237
Query: 548 LQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSH 607
L ER+ L K +QD EE+ R + V + +I AGTL E +A SRWG+ +
Sbjct: 238 LTERQELTKQIQDVEEKVR---NKVVEATSLSINGQAPAGTLAEFYEAQSRWGREITAEE 294
Query: 608 KENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDE 667
+E +V E+ + A LV+++E KL A+ K LRAE+ LSK+E S+ + D E+ITDE
Sbjct: 295 REKMVEESSRAKTARLVRRIEHKLGVAQAKKLRAEKLLSKIEASMILSSPDDDQETITDE 354
Query: 668 ERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALAL 727
ER MFR++GLRM A+L +G RGVFDG VENMHLHWK+RELVK+I K KT ++ A L
Sbjct: 355 ERVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEETARLL 414
Query: 728 EAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLK 787
E ESGG+LVS+D++ KGYA+V YRGK+Y+RP LRP+NLLTK KAL RS+ +QR EAL +
Sbjct: 415 EYESGGILVSIDRVPKGYALVYYRGKNYRRPIALRPRNLLTKAKALKRSVAMQRHEALSQ 474
Query: 788 HVATLESNAGRLRSEI 803
H++ LE N +++ EI
Sbjct: 475 HISELEQNIEQMKKEI 490
>gi|449459492|ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 285/703 (40%), Positives = 424/703 (60%), Gaps = 65/703 (9%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
GEV+ W+KR +G KR SLAEL+L E EL RLR + + K K + AG
Sbjct: 136 GEVQ-KWKKR-----DGVREKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAG 189
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
+T+ +V+ IHE W+ SE+V++ E LNMKR H++LERKTGG+V+WRSG+ + LYRG
Sbjct: 190 ITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGP 249
Query: 340 SYEVP--SVQLNKRIYKRNELPASSVSQATDKQIHKQISM-----------SVNLETASE 386
+Y P S ++ + ++ LPAS + + +S SV + + +
Sbjct: 250 NYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERSAGPTSSVKMPSPTL 309
Query: 387 EQETDFVREVKYE--------DEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQP 438
Q V+++ ++ E LL+GLGPR++DW G DPLPVDAD+LP IVPGY+
Sbjct: 310 IQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRK 369
Query: 439 PFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIA 498
PFR+LPYGV+ L E T+L+RLAR LP HFALGR+R+LQGLA ++I+LWEK IAKIA
Sbjct: 370 PFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIA 429
Query: 499 LKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSL 558
+KRGVQ T ++ M E+++ LTGGTLLSR+++F+V YRGK+FL V+ A++++ + L
Sbjct: 430 VKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHM--RL 487
Query: 559 QDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVR 618
+ ++ A+ +E E T + + + W K++ ++ + E +R
Sbjct: 488 HEMKQTDNSPATTGQGLKLEINENGPTNES-----QSITGW-KKIVSERRKLMSSETSMR 541
Query: 619 RHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLR 678
+ + KL+ A K +AE L+K+EE K + + D E IT EER+M +K+GLR
Sbjct: 542 KTSI-------KLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLR 594
Query: 679 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 738
MK FLLLGRRGVFDGTVENMHLHWKYRELVKII ++F +A LEAESGG+LV+V
Sbjct: 595 MKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAV 654
Query: 739 DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGR 798
+++ + +A++++RGK+Y+RPS LRP++LL K++AL RSIE QR+++L HV L N
Sbjct: 655 ERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNVEE 714
Query: 799 LRSEIEQ------MNSVKGTGDEQLYDKLDSAYAT---------------EDDDSEDEGD 837
L+ ++++ M S+K + +Q + +D T E+ +E +
Sbjct: 715 LKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLEENE 774
Query: 838 EAYLEMYAGGNDNED-EIDNSTHNLEMESD-FPYHAQDQESET 878
A ++ G + + +D S + L+ +D F H DQ + T
Sbjct: 775 VAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNAT 817
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 434 PGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSS 493
PGY P L R++A +++L P ++G+S + G+A A+ + ++K S
Sbjct: 897 PGYFPANVPQLSNKERLLLRRQALKMKKL-----PVLSVGKSNVITGVAKAIKEHFKKHS 951
Query: 494 IAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+A + +K + T+ + +V +++ TG L+S+ ++ YRG
Sbjct: 952 LAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRG 994
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 568 RASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRR----HAYL 623
+++A V PS E++ + A K +D N+ +G S +L E+ H
Sbjct: 813 QSNATVRPSFESVRQGNHA---KVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVA 869
Query: 624 VQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFL 683
+ K K R E + ++ LS + +P A+ ++++ER + R+ L+MK
Sbjct: 870 MNKDTKPSVRLEEE--KSPPLLSSTRIN-QPGYFPANVPQLSNKERLLLRRQALKMKKLP 926
Query: 684 LL--GRRGVFDGTVENMHLHWKYRELVKIIVKVKT-FDQAKKIALALEAESGGVLVSVDK 740
+L G+ V G + + H+K L + VK + ++I LE +G VLVS +
Sbjct: 927 VLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEP 986
Query: 741 ISKGYAMVVYRG 752
+++YRG
Sbjct: 987 ----SKVILYRG 994
>gi|449515235|ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 289/710 (40%), Positives = 424/710 (59%), Gaps = 78/710 (10%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
GEV+ W+KR +G KR SLAEL+L E EL RLR + + K K + AG
Sbjct: 156 GEVQ-KWKKR-----DGVREKKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAG 209
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
+T+ +V+ IHE W+ SE+V++ E LNMKR H++LERKTGG+V+WRSG+ + LYRG
Sbjct: 210 ITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGP 269
Query: 340 SYEVP--SVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVR--- 394
+Y P S ++ + ++ LPAS + + +S +N E ++ T +V+
Sbjct: 270 NYIYPYFSHEILEDEGSQDALPASHSDDGGNSETESTLS-CINDERSA--GPTSYVKMPS 326
Query: 395 -------------------EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPG 435
E + ++ E LL+GLGPR++DW G DPLPVDAD+LP IVPG
Sbjct: 327 PTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPG 386
Query: 436 YQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
Y+ PFR+LPYGV+ L E T+L+RLAR LP HFALGR+R+LQGLA ++I+LWEK IA
Sbjct: 387 YRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIA 446
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLA 555
KIA+KRGVQ T ++ M E+++ LTGGTLLSR+++F+V YRGK+FL V+ A++++ +
Sbjct: 447 KIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHM- 505
Query: 556 KSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHK----ENL 611
L + ++ A+ +E E T + + + W K + + K E
Sbjct: 506 -RLHEMKQTDNSPATTGQGLKLEINENGPTNES-----QSITGWKKIVSERRKLMSSETS 559
Query: 612 VREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFM 671
+R+ ++ + RK +AE L+K+EE K + + D E IT EER+M
Sbjct: 560 MRKTSIKLSIVCI-----------RKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYM 608
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+K+GLRMK FLLLGRRGVFDGTVENMHLHWKYRELVKII ++F +A LEAES
Sbjct: 609 LKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAES 668
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVAT 791
GG+LV+V+++ + +A++++RGK+Y+RPS LRP++LL K++AL RSIE QR+++L HV
Sbjct: 669 GGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLK 728
Query: 792 LESNAGRLRSEIEQ------MNSVK---------GTGDEQLYDKL----DSAYATEDDDS 832
L N L+ ++++ M S+K G + Q L DSA T ++S
Sbjct: 729 LTQNVEELKLKLDEDKRAIGMESIKTSTFQPGKEGIDEIQTTGSLKLVADSACLTHAENS 788
Query: 833 E--DEGDEAYLEMYAGGNDNED-EIDNSTHNLEMESD-FPYHAQDQESET 878
+E + A ++ G + + +D S + L+ +D F H DQ + T
Sbjct: 789 TCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHNGDQSNAT 838
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 434 PGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSS 493
PGY P L R++A +++L P ++G+S + G+A A+ + ++K S
Sbjct: 918 PGYFPANVPQLSNKERLLLRRQALKMKKL-----PVLSVGKSNVITGVAKAIKEHFKKHS 972
Query: 494 IAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+A + +K + T+ + +V +++ TG L+S+ ++ YRG
Sbjct: 973 LAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRG 1015
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 568 RASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRR----HAYL 623
+++A V PS E++ + A K +D N+ +G S +L E+ H
Sbjct: 834 QSNATVRPSFESVRQGNHA---KVPMDTNAEFGTIEPQSGANSLSGESNSGTSDAVHHVA 890
Query: 624 VQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFL 683
+ K K R E + ++ LS + +P A+ ++++ER + R+ L+MK
Sbjct: 891 MNKDTKPSVRLEEE--KSPPLLSSTRIN-QPGYFPANVPQLSNKERLLLRRQALKMKKLP 947
Query: 684 LL--GRRGVFDGTVENMHLHWKYRELVKIIVKVKT-FDQAKKIALALEAESGGVLVSVDK 740
+L G+ V G + + H+K L + VK + ++I LE +G VLVS +
Sbjct: 948 VLSVGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEP 1007
Query: 741 ISKGYAMVVYRG 752
+++YRG
Sbjct: 1008 ----SKVILYRG 1015
>gi|302768979|ref|XP_002967909.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
gi|300164647|gb|EFJ31256.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
Length = 557
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/552 (44%), Positives = 354/552 (64%), Gaps = 23/552 (4%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
+RR SLAEL LP++ELRRLR + TK + ++K G+T+ VV IH+KW+TSEIV+L
Sbjct: 20 QRRVRPPSLAELVLPDAELRRLRTMIIHTKERIKVKKLGITRNVVQAIHQKWRTSEIVKL 79
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA 360
K + A+NM+++HE LE++TGGLVIWR+GTA+ +YRG Y P K +P
Sbjct: 80 KCDQEVAMNMRKVHEELEKRTGGLVIWRAGTALVIYRGKDYAGPP--------KERWIPT 131
Query: 361 SSVSQATDKQIHKQISMSVNLETASEEQETDFVR-----EVKYEDEVEKLLDGLGPRYTD 415
SVS+ + + S + Q +FV E +YE ++++LL LGPRY D
Sbjct: 132 ESVSKPKESVEKPEKSHVSGELLGIDTQFKEFVNHIPFIEAEYEMQMDRLLAELGPRYAD 191
Query: 416 WPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRS 475
W G P+PVD D LP I ++ P+R+LPYG+ L+ KE TNL RLAR +PP F + R+
Sbjct: 192 WKGDRPVPVDGDKLPAIDHNFKSPYRLLPYGMEPKLSDKEFTNLVRLARQMPPQFVISRN 251
Query: 476 RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYR 535
+ LQGLA AM+KLWEK+ I K+A+K+ VQ T + +M +++K+LTG LL R K ++FYR
Sbjct: 252 KGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAKMADELKRLTGCVLLGREKTHMIFYR 311
Query: 536 GKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDA 595
GK+FL + A +ERE ++ + +D E++AR+ LP+ + EK + +A
Sbjct: 312 GKDFLPAPIAAAFEEREAMSFANKDVEDKARM------LPTGKVTEKIVHVEQRPQETEA 365
Query: 596 NSR---WGKRLDDSHKENLV-REAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEES 651
+ + W K ++ + +V + A R + ++L+ + A RK +AE ALSKVE+
Sbjct: 366 DIKLKEWIKNQEEEKRRAIVMKAARAARARRIERRLDIVSSFAIRKKEKAEEALSKVEKL 425
Query: 652 LKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKII 711
+KP E D E+IT+EER+ +++GL+MKAFLLLGRRGV+ G +ENMHLHWKYRELVK++
Sbjct: 426 MKPREPSEDRETITEEERYTLQRVGLKMKAFLLLGRRGVYSGIIENMHLHWKYRELVKVV 485
Query: 712 VKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRK 771
K K + A +E ESGG+L+ + +SKG + YRGK+Y+RP LRP NLLTKRK
Sbjct: 486 YKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQVFLYYRGKNYRRPEELRPHNLLTKRK 545
Query: 772 ALARSIELQRQE 783
ALAR E QR+E
Sbjct: 546 ALARYTETQRRE 557
>gi|302761182|ref|XP_002964013.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
gi|300167742|gb|EFJ34346.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
Length = 555
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/577 (43%), Positives = 359/577 (62%), Gaps = 38/577 (6%)
Query: 223 KFPWEKRKEEVAEG--RWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
KFPWE A +RR SLAEL LP++ELRRLR + TK + ++K G+
Sbjct: 1 KFPWEMEDFSKAPSGEEEQPQRRVRPPSLAELVLPDAELRRLRTMIIHTKERIKVKKLGI 60
Query: 281 TQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVS 340
T+ VV IH+KW+TSEIV+LK + A+NM+++HE LE++TGGLVIWR+G A+ +YRG
Sbjct: 61 TRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRKVHEELEKRTGGLVIWRAGAALVIYRGKD 120
Query: 341 YEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVR-----E 395
Y P K +P SVS+ + + S + Q +FV E
Sbjct: 121 YAGPP--------KERWIPTESVSKPKESVEKPEKSHVSGELLGIDTQFKEFVNHIPFIE 172
Query: 396 VKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKE 455
+YE ++++LL LGPRY DW G P+PVD D LP I ++ P+R+LPYG+ L+ +E
Sbjct: 173 AEYEMQMDRLLAELGPRYADWKGDRPVPVDGDKLPAIDHNFKSPYRLLPYGMEPKLSDRE 232
Query: 456 ATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI 515
TNL RLAR +PP F + R++ LQGLA AM+KLWEK+ I K+A+K+ VQ T + +M +++
Sbjct: 233 FTNLVRLARQMPPQFVISRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAKMADEL 292
Query: 516 KKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLP 575
K+LTG LL R K ++FYRGK+FL + A +ERE ++ + +D E++AR+ LP
Sbjct: 293 KRLTGCVLLGREKTHMIFYRGKDFLPAPIAAAFEEREAMSFANKDVEDKARM------LP 346
Query: 576 SIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQ--------KL 627
+ + EK + +A D KE + + E +R A +++ ++
Sbjct: 347 TGKVTEKIVHVEQRPQETEA--------DIKLKEWIKNQEEEKRRAIVMKAARAARARRI 398
Query: 628 EKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL-G 686
E++L A RK +AE ALSKVE+ +KP E D E+IT+EER+ +++GL+MKAFLLL G
Sbjct: 399 ERRLDIAVRKKEKAEEALSKVEKLMKPREPSEDRETITEEERYTLQRVGLKMKAFLLLAG 458
Query: 687 RRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYA 746
RRGV+ G +ENMHLHWKYRELVK++ K K + A +E ESGG+L+ + +SKG
Sbjct: 459 RRGVYSGIIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQV 518
Query: 747 MVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQE 783
+ YRGK+Y+RP LRP NLLTKRKALAR E QR+E
Sbjct: 519 FLYYRGKNYRRPEELRPHNLLTKRKALARYTETQRRE 555
>gi|225452088|ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/604 (42%), Positives = 359/604 (59%), Gaps = 39/604 (6%)
Query: 211 GLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSR---TSLAELTLPESELRRLRNLTF 267
G+G + S K PW K ++ +V RR+ + + AELTL L RLR
Sbjct: 163 GIGGDENSRIGGKMPWLKTEK-------VVFRRTKKEKVVTAAELTLDPMLLERLRGEAV 215
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+ + ++K AG+T++VVD IH WK+ E+ +K + NM R EILE KT GLVIW
Sbjct: 216 KMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIW 275
Query: 328 RSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPA---SSVSQATDKQIHKQISMS---VNL 381
+ +YRG +Y+ S K R L A +S S+ +++S +
Sbjct: 276 SKKDTLVVYRGSNYQSTSKHFQKM---RPGLVAGADASNSKLNQSNFEDDLTISEIKFHE 332
Query: 382 ETASEEQ-----ETD------FVREVK---------YEDEVEKLLDGLGPRYTDWPGCDP 421
T E+ E D F+ E+ YE E ++LLDGLGPR+ DW P
Sbjct: 333 STTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKP 392
Query: 422 LPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGL 481
LPVDAD+LP ++PG++PPFR+ P RS L E T L++LA LP HF LGR+R+LQGL
Sbjct: 393 LPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGL 452
Query: 482 AVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLS 541
A A++KLWEKS I KIA+K G+ T +E+M ++K LTGG LL RNK F++ YRGK+FL
Sbjct: 453 AAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLP 512
Query: 542 PDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGK 601
V + ERE K Q EE ARL+A + + + + T GTL E + + +
Sbjct: 513 CRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRG 572
Query: 602 RLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADP 661
D + + + EAE R ++K E+ L +RK+ R+ + L+K+ + +PA+ AD
Sbjct: 573 LKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADK 632
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAK 721
E IT+EER FRK+G +M + LLLGRRGVFDG +E +H HWK+RE+VK+I ++F Q
Sbjct: 633 EMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVL 692
Query: 722 KIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQR 781
A LE+ESGGVLVS+DK+ +G+A+++YRGK+Y+RP L PKNLLTKR+AL RS+E+QR
Sbjct: 693 YTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQR 752
Query: 782 QEAL 785
+L
Sbjct: 753 IGSL 756
>gi|356567264|ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/569 (42%), Positives = 344/569 (60%), Gaps = 30/569 (5%)
Query: 213 GEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSK 272
EEV S G + PWEK ++ G VKR + T+ AELTL ++ LRRLRN + ++
Sbjct: 136 NEEVRSKG--RMPWEKDEKF---GFVKVKREKAVTA-AELTLDKALLRRLRNEAARMRTW 189
Query: 273 TRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTA 332
++K AG+TQ VVD I W+ +E+ +K + NM R EI+E KTGGLV+
Sbjct: 190 IKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDF 249
Query: 333 VSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDF 392
+ +YRG ++ + ++ D HK ++ T ++
Sbjct: 250 LVVYRGCNHH----------------SSEMLNWNAD---HKD-----SISTGIQDVNCQL 285
Query: 393 VREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 452
V YE E E+LLDGLGPR+ DW PLPVDAD+LP VPG+QPPFR+ P + L
Sbjct: 286 VNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLT 345
Query: 453 RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMV 512
E T ++LA+ LP HF LGR++ L+GLA A++KLWEKS IAKIA+K G+ T +E M
Sbjct: 346 DYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMA 405
Query: 513 EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF 572
++K LTGG LL RNK +++ YRG +FL V +++RE KS Q EE AR++A
Sbjct: 406 NELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMKAIQA 465
Query: 573 VLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLA 632
P E + T+GTL E ++ + N+ EAE+ R +++ +++
Sbjct: 466 FSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEEQRRAF 525
Query: 633 RAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFD 692
+K+ R+ER LSK+ + P+E+ D E +TDEER FRK+GL+M++ LLLGRRG+FD
Sbjct: 526 ILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFD 585
Query: 693 GTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRG 752
G +E +H HWK+RE+VK+I K F Q A LE ESGG+LVSVDK+ +G+A+++YRG
Sbjct: 586 GVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRG 645
Query: 753 KDYQRPSTLRPKNLLTKRKALARSIELQR 781
K+Y+RPS KNLLTKR+AL RS+E+QR
Sbjct: 646 KNYKRPSIKLAKNLLTKREALRRSLEMQR 674
>gi|449441730|ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 760
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 245/601 (40%), Positives = 348/601 (57%), Gaps = 30/601 (4%)
Query: 202 GGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRR 261
GGF E EE G+ + PWEK + + L + + + AEL L L R
Sbjct: 147 GGFDLEG----FEESGT--RRRMPWEKDDDGIV----LRRMKKKTVTSAELNLDRVLLER 196
Query: 262 LRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKT 321
L+ + + ++ G+TQ VV+ I W+ +E+ LK + + NM R EI+E KT
Sbjct: 197 LKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKT 256
Query: 322 GGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNEL-PASSVSQATDKQI------HKQ 374
GG+V+W A+ +YRG +Y + L K+ + P + V TD
Sbjct: 257 GGMVVWSKKNALVVYRGCNY---PLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESG 313
Query: 375 ISMSVNLETASEEQETDF--VREVK--------YEDEVEKLLDGLGPRYTDWPGCDPLPV 424
++ S+N E+ + F +R YE E ++LLD LGPR+ DW PLPV
Sbjct: 314 LNRSINDNDGEWEEASSFFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPV 373
Query: 425 DADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVA 484
DADMLP +VPGY PPFR P + L +L++LA LP HF LGR+R+LQGLA +
Sbjct: 374 DADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAAS 433
Query: 485 MIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDV 544
++KLWEKS IAKIALK GV T +E+M ++K LTGGTLL RNK ++ YRG +FL V
Sbjct: 434 ILKLWEKSMIAKIALKWGVPNTDNEQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGV 493
Query: 545 TEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLD 604
+++ +RE + Q EE +RL+AS F E +E+ G AGTL + D +
Sbjct: 494 ADSIIQREVELQRWQLHEENSRLKASEFFCFDTENMEERGKAGTLSDFKDITVGYEDLST 553
Query: 605 DSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESI 664
S + L EAE + ++ E++L K+ ++ + L+K+ S + E AD E I
Sbjct: 554 GSTESRLQAEAEKGKIIRGLRMQERRLKILNFKVEKSTKELTKLNASWRRVEPDADQELI 613
Query: 665 TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIA 724
T+EER FRK+GL+M + L LGRRGVFDG +E +H HWK+RE+VK+I + F+Q A
Sbjct: 614 TNEERICFRKMGLKMDSCLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTA 673
Query: 725 LALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEA 784
LEAESGG+LVSVDK+ +GYA++++RGK+Y+RP KNLLTKRKAL+RS+E+QR +
Sbjct: 674 KLLEAESGGILVSVDKLKEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGS 733
Query: 785 L 785
L
Sbjct: 734 L 734
>gi|449490080|ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 760
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/601 (40%), Positives = 349/601 (58%), Gaps = 24/601 (3%)
Query: 223 KFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQ 282
+ PWEK + + L + + + AEL L L RL+ + + ++ G+TQ
Sbjct: 162 RMPWEKDDDGIV----LRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQ 217
Query: 283 AVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
VV+ I W+ +E+ LK + + NM R EI+E KTGG+V+W A+ +YRG +Y
Sbjct: 218 DVVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVIYRGCNY- 276
Query: 343 VPSVQLNKRIYKRNEL-PASSVSQATDKQI----HKQ--ISMSVNLETASEEQETDF--V 393
+ L K+ + P + V TD H + ++ S+N E+ + F +
Sbjct: 277 --PLNLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLI 334
Query: 394 REVK--------YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPY 445
R YE E ++LLD LGPR+ DW PLPVDADML +VPGY PPFR P
Sbjct: 335 RHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVVPGYMPPFRRCPP 394
Query: 446 GVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQL 505
+ L +L++LA LP HF LGR+R+LQGLA +++KLWEKS IAKIALK GV
Sbjct: 395 YTKQNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPN 454
Query: 506 TTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQA 565
T +E+M ++K LTGGTLL RNK ++ YRG +FL V +++ +RE + Q EE +
Sbjct: 455 TDNEQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEENS 514
Query: 566 RLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQ 625
RL+AS F E +E+ G AGTL + D + S + L EAE + ++
Sbjct: 515 RLKASEFFCFDTENMEERGKAGTLSDFKDITVGYEDLSTGSTESRLQAEAEKXKIIRGLR 574
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
E++L K+ ++ + L+K+ S + E AD E IT+EER FRK+GL+M + L L
Sbjct: 575 MQERRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDSCLTL 634
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVFDG +E +H HWK+RE+VK+I + F+Q A LEAESGG+LVSVDK+ +GY
Sbjct: 635 GRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKLKEGY 694
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQ 805
A++++RGK+Y+RP KNLLTKRKAL+RS+E+QR +L + L+ E+E+
Sbjct: 695 AIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQKIYELQHELEK 754
Query: 806 M 806
+
Sbjct: 755 V 755
>gi|357167767|ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 1053
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/463 (47%), Positives = 302/463 (65%), Gaps = 29/463 (6%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK DE +KLLDGLGPR++ W G DPLPVDAD+LP IVPG++ PFR+LP GV S L +
Sbjct: 386 EVKVADEGDKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGFRRPFRLLPSGVPSKLTDR 445
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLAR LP H+ALGRS LQGLAV+MIKLWE+ +AKIA+KRG SE + E+
Sbjct: 446 EMTILRRLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGAYCIDSELVSEE 505
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ +VFYRGK+FLSP V+ A+++R + + S + +
Sbjct: 506 LKGLTGGTLLSRDNKSIVFYRGKDFLSPAVSLAIEKRRKHSNS-----------TTGKLK 554
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P E + A LK T DA+ + H+E E E + + Q +E +L++A
Sbjct: 555 PETEESTSTQDASELKMTSDASVNG----HECHEEK--NEGETSLNT-VAQNVEIRLSQA 607
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ +AE+ L ++E++ +P++ + E I+DEER+M RK+GL+MK FLLLGRRGVFDGT
Sbjct: 608 IVEKEKAEKLLEELEKASQPSKAETR-EHISDEERYMLRKIGLQMKPFLLLGRRGVFDGT 666
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
+ENMHLHWKYRELVKII K + + A LE++SGG+LV+V+++SKG+A+++YRGK+
Sbjct: 667 IENMHLHWKYRELVKIICKEHSMKDVEYAARTLESQSGGILVAVERVSKGHAIIMYRGKN 726
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE----------IE 804
Y RPSTLRPK+LL KR AL RS+E QRQ++L HV L N LR + I
Sbjct: 727 YHRPSTLRPKSLLNKRDALKRSVEYQRQKSLKLHVLNLSKNIDYLRGQMVSFIHENKGIN 786
Query: 805 QMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGG 847
+++ GT +E+ + + +E DS G + L + G
Sbjct: 787 DLSNSSGTLEEKSEEVAPEGFDSEGQDSTSSGTDGTLNLTKSG 829
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 73/100 (73%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
S S AELTLP ELRRL+ + + + + ++ G+T+ +V+ IHE+W+ E+V+++ +
Sbjct: 131 SPPSAAELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKIRCDD 190
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP 344
A+NM+R HEILERKTGGLVIWRSG+ + LYRG +Y+ P
Sbjct: 191 VSAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYKYP 230
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 654 PAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 713
P+ A ++ +E + +G+R++ L +G+ GV +G V +H W+ ELVKI
Sbjct: 130 PSPPSAAELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKIRCD 189
Query: 714 VKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRP 758
+ ++ LE ++GG+++ G +++YRG +Y+ P
Sbjct: 190 DVSAMNMRRTHEILERKTGGLVI----WRSGSTIILYRGTNYKYP 230
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 29/146 (19%)
Query: 439 PFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
PFR P R L RK+A +++ P A+GR+ + G+A + ++K +A +
Sbjct: 917 PFRTAPLSNRERLMLRKQALKMKKR-----PVLAIGRNNVITGVAKTIQTHFKKHPLAIV 971
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG-------------------KN 538
+K T ++++ ++++ TG L+SR + ++ YRG K
Sbjct: 972 NIKNRADGTPVQQLISELERATGSVLVSREPNKVILYRGWGAEVTQKSSKENSTNEVEKE 1031
Query: 539 FLSPDVTEALQERERLAKSLQDEEEQ 564
+SP + EA+ RL L +E Q
Sbjct: 1032 VISPQLLEAI----RLECGLHSDESQ 1053
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 664 ITDEERFMFRKLGLRMK--AFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKT-FDQA 720
+++ ER M RK L+MK L +GR V G + + H+K L + +K +
Sbjct: 923 LSNRERLMLRKQALKMKKRPVLAIGRNNVITGVAKTIQTHFKKHPLAIVNIKNRADGTPV 982
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRG 752
+++ LE +G VLVS + +++YRG
Sbjct: 983 QQLISELERATGSVLVSREP----NKVILYRG 1010
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 262 LRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKT 321
LR + Q K + G+ ++ +H WK E+V++ + +++ LE ++
Sbjct: 644 LRKIGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHSMKDVEYAARTLESQS 703
Query: 322 GGLVIW----RSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISM 377
GG+++ G A+ +YRG +Y PS K + + + A + + Q
Sbjct: 704 GGILVAVERVSKGHAIIMYRGKNYHRPSTLRPKSLLNKRD--------ALKRSVEYQRQK 755
Query: 378 SVNLETASEEQETDFVR 394
S+ L + + D++R
Sbjct: 756 SLKLHVLNLSKNIDYLR 772
>gi|414870652|tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/563 (40%), Positives = 341/563 (60%), Gaps = 18/563 (3%)
Query: 224 FPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQA 283
PW ++E + +++ + AE L EL RLR L R K AG+T
Sbjct: 140 VPWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVTDE 199
Query: 284 VVDIIHEKWKTSE-IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
VV + +W + E + ++I +M R EILE KTGGLV+W G +YRG Y
Sbjct: 200 VVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSKY- 258
Query: 343 VPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEV 402
Q N + S +HK + N ++ +++ + V+ YE EV
Sbjct: 259 ----QQN-----------AKHSHTFLTNVHKDDAFQENDQSICGQKDEEPVKGTLYEREV 303
Query: 403 EKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRL 462
+LLD LGPR+ DW PLPVDAD+LP VPG++ P+R+ P GVR TLA +E T L++L
Sbjct: 304 NRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKL 363
Query: 463 ARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGT 522
AR+LP HFALGR+ +LQGLA A++KLWEKS IAKIA+K G+Q T +E+M ++K LTGGT
Sbjct: 364 ARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLKHLTGGT 423
Query: 523 LLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETIEK 582
++ RNKDF++ YRGK+FL V + + +RE Q +EE+ARL+A L + + +
Sbjct: 424 VILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKA-VDSLQMVGELSE 482
Query: 583 SGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAE 642
+ GT +E ++++ ++ + EAE R ++ E KL+ +K+ R+
Sbjct: 483 ESSLGTFREYQGFHAKFVHENTENSNTMIELEAEKYRLEKELKDHEWKLSVLNKKIERSN 542
Query: 643 RALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHW 702
+AL+K+ S P+E+ AD E +T+EE+ MFR++G +M +LLGRRG+FDG +E +H HW
Sbjct: 543 QALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHW 602
Query: 703 KYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLR 762
K++E+VK+I K Q A LE E+GG+L++V+K++ +A+++YRGK+Y+RP+
Sbjct: 603 KHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSS 662
Query: 763 PKNLLTKRKALARSIELQRQEAL 785
NLLTKR+AL RSIE+QR+ ++
Sbjct: 663 FSNLLTKREALRRSIEVQRRGSM 685
>gi|357521157|ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355524889|gb|AET05343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 676
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/583 (40%), Positives = 330/583 (56%), Gaps = 86/583 (14%)
Query: 251 ELTLP---ESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPA 307
E+T+P + EL RLR + K K I +GLT++V+ IH +W T+E+V+LK
Sbjct: 100 EVTVPCLEKEELSRLRTMGIHLKQKISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLV 159
Query: 308 LNMKRMHEILE------------------------------------------RKTGGLV 325
NM H I++ R+TGGLV
Sbjct: 160 QNMNLAHNIVQVSIPSSRIIPYRMVIVLQLVILCFFFHHRITNLVPSGLYLLVRRTGGLV 219
Query: 326 IWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETAS 385
IWRSG+ + +YRG SY+ P+ N ++ S+ D++ S SV L
Sbjct: 220 IWRSGSVMWVYRGKSYQGPT---NGNQHE---------SKGGDEK-----SESVVLNQQQ 262
Query: 386 EEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPY 445
E T E E ++LD GPR+ DW G LPVDAD+LP +PGY+ P R+LP
Sbjct: 263 PENMT------PEEAEFNRMLDDFGPRFVDWWGTGILPVDADLLPPTIPGYRTPLRILPA 316
Query: 446 GVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQL 505
+ L E T + +LA+ LP HFALGR+R LQGLA A++KLWEKS +AKIA+K GVQ
Sbjct: 317 RMHPRLTNDEHTKMLKLAKALPCHFALGRNRNLQGLACAILKLWEKSLVAKIAVKLGVQN 376
Query: 506 TTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQA 565
T +E M ++KKLTGGTLL RNK +++ YRGK+F+ V L ER +E
Sbjct: 377 TNNELMALELKKLTGGTLLLRNKYYILIYRGKDFIPTSVAAILSER----------QENV 426
Query: 566 RLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQ 625
+ RA V S E E S AG++ E +A + G+ + E +++EA + L++
Sbjct: 427 QCRA---VDVSGED-ETSAQAGSMAEFNEAQALCGREISTEECEKMMKEAAEATNVRLMK 482
Query: 626 KLEKKLA----RAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKA 681
K+E+K A + K RAE+ L+K++ S+ P E+ITDEER MFR +GLR+K
Sbjct: 483 KIERKPAVIHEHTDTKKSRAEKLLAKIDSSMVPVGPDNRRETITDEERVMFRVVGLRLKV 542
Query: 682 FLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 741
+L L GVFD +ENMHLHW+ RELVK+I K K+ ++ A LE +SGG+LV++D++
Sbjct: 543 YLQLDTLGVFDSVIENMHLHWRQRELVKLITKQKSLAFVEETASLLEYKSGGILVAIDRL 602
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEA 784
KG++++ YRGKDY+RP TLR +NLLTK KAL SI +QR E+
Sbjct: 603 PKGFSLIYYRGKDYKRPITLRHRNLLTKTKALQHSISMQRHES 645
>gi|255551422|ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis]
Length = 742
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/586 (40%), Positives = 343/586 (58%), Gaps = 45/586 (7%)
Query: 210 LGLGEEVGSDGEVKF--PWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTF 267
LGL E G G K PWE+ ++ V W +K+ + T AEL L + L LR
Sbjct: 156 LGLIREHGDFGVNKKLKPWEREEKFVY---WRIKKEKAVTK-AELILEKELLEILRTEAS 211
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+ + ++ AG+TQ+VVD I W+ +E+ +K + NM R EI+E KTGGLV+W
Sbjct: 212 KMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVW 271
Query: 328 RSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETA--- 384
++ +YRG +Y L SS D++I + + T+
Sbjct: 272 TRKDSLVIYRGCNYH---------------LTKSSHVSTMDEKIGSKDGEEEYIPTSIFI 316
Query: 385 SEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLP 444
++ T + +E E ++LLDGLGPR+ DW PLPVDAD+LP +V G+ PP R
Sbjct: 317 GDDANTPTINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF-- 374
Query: 445 YGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQ 504
+ R+ L E T L++LA LP HF LGR+R+LQGLA A++KLWE+S IAKIA+K G+
Sbjct: 375 HYARAKLKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIP 434
Query: 505 LTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQ 564
T +E+M ++K LTGG LL RNK F++ +RGK+FL V + + +RE K Q EE
Sbjct: 435 NTDNEQMANELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEG 494
Query: 565 ARLRASAFVLPSIETIEKSGTAGTLKETLDANSRW---------GKRLDDSHKENLVREA 615
ARL+A E + K+ GTL E D R+ K ++ KE L RE
Sbjct: 495 ARLKAIETSFTDDELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLEREL 554
Query: 616 EVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKL 675
++ H L+ K K+ ++ R LSK+ + PA++ AD E +T+EER RK+
Sbjct: 555 RIQEHKLLILK---------SKIEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKI 605
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
GL+M++ LLLGRRGVFDG +E +H HWK+RE+VK+I + F Q + A LEAE+GG+L
Sbjct: 606 GLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGIL 665
Query: 736 VSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQR 781
VS+DK+ +G+A+++YRGK+Y+RP L NLLTKRKAL RS+E+QR
Sbjct: 666 VSIDKLKEGHAIIIYRGKNYRRPQRLL-NNLLTKRKALCRSLEMQR 710
>gi|326492786|dbj|BAJ90249.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/603 (39%), Positives = 352/603 (58%), Gaps = 36/603 (5%)
Query: 213 GEEVGSDGEVK-FPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQT-K 270
GEE G DG + PW ++E + ++++ + + AE L +EL RLR T
Sbjct: 112 GEEAGGDGNGRPAPWSAARDEGLKAALRRQKKARQPTPAERLLDPAELDRLRRAARGTGD 171
Query: 271 SKTRIKGAGLTQAVVDIIHEKWKT-SEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRS 329
R K AG+T VV+ + W E+ +++ M R EILE K+GGLV+W
Sbjct: 172 GWLRAKKAGVTDEVVEDVCRVWSGGQELAAVQVVEPLRRCMDRAREILEIKSGGLVVWTK 231
Query: 330 GTAVSLYRGVSY------------EVPSVQLNKRI-----YKRNELPASSVSQATDKQ-I 371
G +YRG SY ++ V L K +K S + D +
Sbjct: 232 GDVHFVYRGSSYLENIKHRQKSIADIQRVPLEKCTAPGPQWKHESNAEPSTNHNDDAHGV 291
Query: 372 HKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPG 431
+ I S+ + E E YE EV +LLD LGPR+ DW PLPVDAD+LP
Sbjct: 292 FRGIDPSLAVHAYEEPVEGTL-----YEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPE 346
Query: 432 IVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEK 491
+VPG++ PFR P GVR TLA +E T L++LAR LP HFALGR+ +LQGLA A++KLWEK
Sbjct: 347 VVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKLWEK 406
Query: 492 SSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 551
S IAKIA+K G+Q T +E+M ++K LTGGT++ RNKDF++ YRGK+FL V +++ E+
Sbjct: 407 SLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNKDFVILYRGKDFLPGGVKQSVIEQ 466
Query: 552 ERLAKSLQDEEEQARLRASAFV-----LPSIETIEKSGTAGTLKETLDANSRWGKRLDDS 606
E + Q +EE+ARL + LPS E+ + G+ +E D + ++
Sbjct: 467 EARVYAQQVKEEEARLMVMDSLKMFAGLPSEES-----SVGSFREYQDFQLNHVQETTEN 521
Query: 607 HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITD 666
+ + EAE R ++ E++L +K+ R+ AL+K+ S P+E+ AD E +T+
Sbjct: 522 NMALIELEAEKHRLEKELKDQERRLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTE 581
Query: 667 EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALA 726
EER +FRK+GL+M +LLGRRG+FDG +E +H HWK++E+VK+I K Q ++
Sbjct: 582 EERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQITYTSML 641
Query: 727 LEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
LE E+GG+L++ K++ +A+++YRGK+Y RP+ P NLLTKR+AL RS+E+QR+ ++
Sbjct: 642 LEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKSSPSNLLTKREALRRSVEVQRRGSMK 701
Query: 787 KHV 789
+V
Sbjct: 702 YYV 704
>gi|357145812|ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/588 (40%), Positives = 350/588 (59%), Gaps = 38/588 (6%)
Query: 224 FPWEKRKEEVAEGRWLVKRRSSRT---SLAELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
PW ++E + +V RR + + AE L + L RLR R K AG+
Sbjct: 133 VPWSAARDEHLK---VVLRREKKVREPTRAERELGPALLERLRRAARGMDRWARAKKAGV 189
Query: 281 TQAVVDIIHEKWKT-SEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
T VV+ + +W + E+ ++I M R EILE KTGGLV+W G +YRG
Sbjct: 190 TDEVVEDVRSEWSSGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTKGDIHFVYRGS 249
Query: 340 SY------------EVPSVQLNKRIYKRN-ELPASSVSQATDKQIHKQISMSVNLETASE 386
Y ++ V+ + YK N EL +A K ++ S++++T E
Sbjct: 250 DYVHNMKYSHNFVADIQKVRTPQEKYKSNVELLGKHNGKA--KGAFREKDSSIDIQTYEE 307
Query: 387 EQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYG 446
V+ YE EV +LLD LGPR+ DW PLPVDAD+LP +V G++ PFR P G
Sbjct: 308 P-----VKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVLGFKTPFRQCPPG 362
Query: 447 VRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLT 506
VR TLA +E T L++LAR LP HFALGR+ +LQGLA A++KLWEKS +AKIA+K G++ T
Sbjct: 363 VRPTLADEELTYLRKLARPLPAHFALGRNTKLQGLAAAILKLWEKSLVAKIAVKVGIENT 422
Query: 507 TSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQAR 566
+E+M ++K LTGGT++ RNKDF++ YRGK+FL V +++ + E + Q +EE+AR
Sbjct: 423 NNEQMAWNLKHLTGGTIILRNKDFIILYRGKDFLPAGVKQSVIQHEAQVDAQQVKEEEAR 482
Query: 567 LRASAFV-----LPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHA 621
L + + LPS+E+ +AGT +E D ++K + EAE R
Sbjct: 483 LSGTESLQMFAGLPSVES-----SAGTFREYQDFQVNQAHETTINNKAMIELEAEKHRLE 537
Query: 622 YLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKA 681
++ E++L +K+ R+ +AL+K+ S P+E+ AD E +T+EER +FRK+GL+M
Sbjct: 538 KELKDQERRLFILTKKIERSNQALAKLHSSWNPSEQSADKELLTEEERMIFRKIGLKMDE 597
Query: 682 FLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 741
+LLGRRGVFDG +E +H HWK++E+VK+I K Q ++ LE E+GGVL++ K+
Sbjct: 598 HVLLGRRGVFDGVIEEIHQHWKHKEIVKVITKQNQSYQITYTSMLLEVETGGVLIATQKL 657
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHV 789
+A+++YRGK+Y+RP P NLLTKR+AL RS+E+QR+ ++ +V
Sbjct: 658 PHSHAIILYRGKNYRRPEK-SPSNLLTKREALRRSVEVQRRGSMKYYV 704
>gi|326499694|dbj|BAJ86158.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/603 (39%), Positives = 351/603 (58%), Gaps = 36/603 (5%)
Query: 213 GEEVGSDGEVK-FPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQT-K 270
GEE G DG + PW ++E + ++++ + + AE L +EL RLR T
Sbjct: 112 GEEAGGDGNGRPAPWSAARDEGLKAALRRQKKARQPTPAERLLDPAELDRLRRAARGTGD 171
Query: 271 SKTRIKGAGLTQAVVDIIHEKWKT-SEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRS 329
R K AG+T VV+ + W E+ +++ M R EILE K+GGLV+W
Sbjct: 172 GWLRAKKAGVTDEVVEDVCRVWSGGQELAAVRVVEPLRRCMDRAREILEIKSGGLVVWTK 231
Query: 330 GTAVSLYRGVSY------------EVPSVQLNKRI-----YKRNELPASSVSQATDKQ-I 371
G +YRG SY ++ V L K +K S + D +
Sbjct: 232 GDVHFVYRGSSYLENIKHRQKSIADIQRVPLEKCTAPGPQWKHESNAEPSTNHNDDAHGV 291
Query: 372 HKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPG 431
+ I S+ + E E YE EV +LLD LGPR+ DW PLPVDAD+LP
Sbjct: 292 FRGIDPSLAVHAYEEPVEGTL-----YEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPE 346
Query: 432 IVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEK 491
+VPG++ PFR P GVR TLA +E T L++LAR LP HFALGR+ +LQGLA A++KLWEK
Sbjct: 347 VVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKLWEK 406
Query: 492 SSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 551
S IAKIA+K G+Q T +E+M ++K LTGGT++ RNKDF++ YRGK+FL V +++ E+
Sbjct: 407 SLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNKDFVILYRGKDFLPGGVKQSVIEQ 466
Query: 552 ERLAKSLQDEEEQARLRASAFV-----LPSIETIEKSGTAGTLKETLDANSRWGKRLDDS 606
E + Q +EE+ARL + LPS E+ + G+ +E D + ++
Sbjct: 467 EARVYAQQVKEEEARLMVMDSLKMFAGLPSEES-----SVGSFREYQDFQLNHVQETTEN 521
Query: 607 HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITD 666
+ + EAE R ++ E++L +K+ R+ AL+K+ S P+E+ AD E +T+
Sbjct: 522 NMALIELEAEKHRLEKELKDQERRLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTE 581
Query: 667 EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALA 726
EER +FRK+GL+M +LLGRRG+FDG +E +H HWK++E+VK+I K Q ++
Sbjct: 582 EERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQITYTSML 641
Query: 727 LEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
LE E+GG+L++ K++ +A+++YRGK+Y RP+ P NL TKR+AL RS+E+QR+ ++
Sbjct: 642 LEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKSSPSNLRTKREALRRSVEVQRRGSMK 701
Query: 787 KHV 789
+V
Sbjct: 702 YYV 704
>gi|242078893|ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/581 (39%), Positives = 353/581 (60%), Gaps = 9/581 (1%)
Query: 209 PLGLGEEVGSDGEVK-FPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTF 267
P G+EV + + PW ++E + +++ + + AE L EL RLR L
Sbjct: 123 PREPGQEVVEKAKPRAVPWAAARDEGLKVALRREKKPRKPTRAETELETDELDRLRRLAR 182
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSE-IVRLKIEGAPALNMKRMHEILERKTGGLVI 326
R K AG+T VV+ + +W + E + ++I +M R EILE KTGGLV+
Sbjct: 183 GMGRWARAKKAGVTDEVVEEMRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVV 242
Query: 327 WRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASE 386
W G +Y+G Y+ + + + N S V Q + + N ++
Sbjct: 243 WTKGDIHFVYKGSKYQQNAK--HSHTFVTNVHKGSLVKQNVRGEADD--AFQENDQSICG 298
Query: 387 EQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYG 446
+++ + V+ YE EV +LLD LGPR+ DW PLPVDAD+LP +PG++ PFR P G
Sbjct: 299 QKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFIPGFKTPFRQCPPG 358
Query: 447 VRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLT 506
VR TLA +E T L++LAR LP HFALGR+ +LQGLA A++KLWEKS IAKIA+K G+Q T
Sbjct: 359 VRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKVGIQNT 418
Query: 507 TSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQAR 566
+E+M ++K LTGGT++ RNKDF++ YRGK+FL V + + +RE Q +EE+AR
Sbjct: 419 NNEQMAWNLKHLTGGTVILRNKDFVILYRGKDFLPGGVAQTVIQREAQVDDEQVKEEEAR 478
Query: 567 LRA--SAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLV 624
L+A S ++ + + E+S + GT +E D ++ + + + EAE R +
Sbjct: 479 LKAVDSLQMVGELSSDEES-SVGTFREYKDFHADFVHANTEKSNTMIELEAEKYRLEKEL 537
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+ E KL+ +K+ R+ +AL+K+ S P+E+ AD E +T+EE+ MFR++G +M +L
Sbjct: 538 KDHEWKLSILNKKIERSNQALAKLRSSWSPSEQSADRELLTEEEKIMFRRIGRKMDGLVL 597
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
LGRRG+FDG +E +H HWK++E+VK+I K Q A LE E+GG+L++V+K++
Sbjct: 598 LGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQARQIMYTANLLEVETGGILIAVEKLTTS 657
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
+A+++YRGK+Y+RP+ NLLTKR+AL RS+E+QR+ ++
Sbjct: 658 HAIILYRGKNYRRPAKSSFSNLLTKREALRRSLEVQRRGSM 698
>gi|242076096|ref|XP_002447984.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
gi|241939167|gb|EES12312.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
Length = 800
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/414 (50%), Positives = 278/414 (67%), Gaps = 21/414 (5%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++ W G DPLPVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 382 EVKLAEEADKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDR 441
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLA LP H+ALGRS LQGLA +MIKLWE+ +AKIALKR T SE + E+
Sbjct: 442 EMTILRRLAHPLPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEE 501
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
IK LTGGTLLSR+K+ +VFYRGK+FL P V+ A+++R +L S + +
Sbjct: 502 IKDLTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKPK----------- 550
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P IE + LK + D + + + V E + + + +E +L++A
Sbjct: 551 PDIEENMPTQDDSVLKVSNDVS------VHIREEGTSVTEVRAKSLNTVAKNVEARLSQA 604
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ RAE+ L ++E++ P + E+I+++ER+M RK+GL+MK FLLLGRRGVFDGT
Sbjct: 605 IAEKERAEKLLEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGT 663
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
+ENMHLHWKYRELVKII K + + A LEAESGG+LV+V+K+SKG+A++VYRGK+
Sbjct: 664 IENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKN 723
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNS 808
YQRPS LRPK LL+KR AL RS+E QR ++L HV L N L+ +QMNS
Sbjct: 724 YQRPSKLRPKTLLSKRDALKRSVENQRCKSLKVHVLKLSKNIDYLK---DQMNS 774
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 16/213 (7%)
Query: 141 GGSTMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNA 200
G S + +I EKL+ GY+ G E + + S +IF LP
Sbjct: 46 GKSALRRISEKLRSLGYLETGS--------ETPTPAPNKSGDAPSPGEIFVPTPAQLPRH 97
Query: 201 RGGFSKESPLGLGE-EVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESEL 259
R G + + G+ E GS + R + S+ S AEL LP EL
Sbjct: 98 RVGSTIDPSWATGDGEAGSAARQRRRGRGRDASGSA-------ASAPPSAAELALPRDEL 150
Query: 260 RRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILER 319
RRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E A+NM+R HEILER
Sbjct: 151 RRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILER 210
Query: 320 KTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI 352
KTGGLVIWRSG+ + LYRG +Y+ P ++R+
Sbjct: 211 KTGGLVIWRSGSTIILYRGTNYKYPYFHYSERV 243
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ G+ +G V +H W+ E+VK+ + ++ LE ++
Sbjct: 153 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 212
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP 758
GG+++ G +++YRG +Y+ P
Sbjct: 213 GGLVI----WRSGSTIILYRGTNYKYP 235
>gi|162463484|ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/513 (41%), Positives = 321/513 (62%), Gaps = 18/513 (3%)
Query: 274 RIKGAGLTQAVVDIIHEKWKTSE-IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTA 332
R K AG+T VV + +W + E + ++I +M R EILE KTGGLV+W G
Sbjct: 190 RAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDM 249
Query: 333 VSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDF 392
+YRG Y Q N + S +HK + N ++ +++ +
Sbjct: 250 HFVYRGSKY-----QQN-----------AKHSHTFLTNVHKDDAFQENDQSICGQKDEEP 293
Query: 393 VREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 452
V+ YE EV +LLD LGPR+ DW PLPVDAD+LP VPG + P+R+ P GVR TLA
Sbjct: 294 VKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKTPYRLCPPGVRPTLA 353
Query: 453 RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMV 512
+E T L++LAR+LP HFALGR+ +LQGLA A++KLWEKS IAKIA+K G+Q T +E+M
Sbjct: 354 DEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMA 413
Query: 513 EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF 572
++K LTGGT++ RNKDF++ YRGK+FL V + + +RE Q +EE+ARL+A
Sbjct: 414 WNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKA-VD 472
Query: 573 VLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLA 632
L + + + + GT +E ++++ ++ + EAE R ++ E KL+
Sbjct: 473 SLQMVGELSEESSLGTFREYQGFHAKFVHENTENSNTMIELEAEKYRLEKELKDHEWKLS 532
Query: 633 RAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFD 692
+K+ R+ +AL+K+ S P+E+ AD E +T+EE+ MFR++G +M +LLGRRG+FD
Sbjct: 533 VLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIFD 592
Query: 693 GTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRG 752
G +E +H HWK++E+VK+I K Q A LE E+GG+L++V+K++ +A+++YRG
Sbjct: 593 GVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYRG 652
Query: 753 KDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
K+Y+RP+ NLLTKR+AL RSIE+QR+ ++
Sbjct: 653 KNYRRPAKSSFSNLLTKREALRRSIEVQRRGSM 685
>gi|154986383|gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/417 (49%), Positives = 281/417 (67%), Gaps = 27/417 (6%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++ W G DP+PVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 280 EVKLAEEADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDR 339
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLA LP H+ALGRS LQGLA +MIKLWE+ +AKIALKR T SE + E+
Sbjct: 340 EMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEE 399
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K+LTGGTLLSR+K+ +VFYRGK+FL P V+ A+++R +L S + +
Sbjct: 400 VKELTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAK----------- 448
Query: 575 PSIETIEKSGTAGTLKETLDANSRW---GKRLDDSHKENLVREAEVRRHAYLVQKLEKKL 631
P IE + LK + D + G + ++ E+L + + +E +L
Sbjct: 449 PGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESL---------NTVAKDVETRL 499
Query: 632 ARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVF 691
++A + +AE+ + ++E++ P + E+I+++ER+M RK+GL+MK FLLLGRRGVF
Sbjct: 500 SQAIAEKAKAEKLIEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVF 558
Query: 692 DGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYR 751
DGT+ENMHLHWKYRELVKII K + + A LEAESGG+LV+V+K+SKG+A++VYR
Sbjct: 559 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 618
Query: 752 GKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNS 808
GK+Y+RPS LRPK LL+KR AL RS+E QR ++L HV L N LR +QMNS
Sbjct: 619 GKNYKRPSKLRPKTLLSKRDALKRSLENQRCKSLKVHVLKLSKNIDYLR---DQMNS 672
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 78/109 (71%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ S AEL LP ELRRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E
Sbjct: 36 SAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCE 95
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI 352
A+NM+R HEILERKTGGLVIWRSG+ + LYRG +Y P ++R+
Sbjct: 96 DVWAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERV 144
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ G+ +G V +H W+ E+VK+ + ++ LE ++
Sbjct: 54 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 113
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP---STLRPKNLLTKRKALARSIELQRQEALLKH 788
GG+++ G +++YRG +Y P + R + L K + +S E +H
Sbjct: 114 GGLVI----WRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESS-DQSNSGDEDETSSQH 168
Query: 789 VATLE-SNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED---------EGDE 838
++ E S+ + + EQ++ G G+ Q + L+ + + E D + + DE
Sbjct: 169 GSSHEKSSENPVVACAEQIHV--GEGNSQTIEYLNQSLSREKDTNHPVSSIKRLVFDADE 226
Query: 839 AYLEMYAGGNDNEDEI 854
L++ A GN NE +
Sbjct: 227 GNLDIRA-GNPNEQHV 241
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 439 PFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
P R P + L RK+A +++ P ++GR+ + G+A + ++K +A +
Sbjct: 806 PLRAAPLSNQERLVLRKQALQMKKR-----PVLSIGRNNAITGVAKTIKTHFKKHPLAIV 860
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+K T ++++ ++++ TG L+SR + ++ YRG
Sbjct: 861 NIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRG 899
>gi|413918579|gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/417 (49%), Positives = 281/417 (67%), Gaps = 27/417 (6%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++ W G DP+PVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 377 EVKLAEEADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDR 436
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLA LP H+ALGRS LQGLA +MIKLWE+ +AKIALKR T SE + E+
Sbjct: 437 EMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEE 496
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K+LTGGTLLSR+K+ +VFYRGK+FL P V+ A+++R +L S + +
Sbjct: 497 VKELTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAK----------- 545
Query: 575 PSIETIEKSGTAGTLKETLDANSRW---GKRLDDSHKENLVREAEVRRHAYLVQKLEKKL 631
P IE + LK + D + G + ++ E+L + + +E +L
Sbjct: 546 PGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESL---------NTVAKDVETRL 596
Query: 632 ARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVF 691
++A + +AE+ + ++E++ P + E+I+++ER+M RK+GL+MK FLLLGRRGVF
Sbjct: 597 SQAIAEKAKAEKLIEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVF 655
Query: 692 DGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYR 751
DGT+ENMHLHWKYRELVKII K + + A LEAESGG+LV+V+K+SKG+A++VYR
Sbjct: 656 DGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYR 715
Query: 752 GKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNS 808
GK+Y+RPS LRPK LL+KR AL RS+E QR ++L HV L N LR +QMNS
Sbjct: 716 GKNYKRPSKLRPKTLLSKRDALKRSLENQRCKSLKVHVLKLSKNIDYLR---DQMNS 769
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 78/109 (71%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ S AEL LP ELRRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E
Sbjct: 133 SAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCE 192
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI 352
A+NM+R HEILERKTGGLVIWRSG+ + LYRG +Y P ++R+
Sbjct: 193 DVWAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERV 241
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ G+ +G V +H W+ E+VK+ + ++ LE ++
Sbjct: 151 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 210
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP---STLRPKNLLTKRKALARSIELQRQEALLKH 788
GG+++ G +++YRG +Y P + R + L K + +S E +H
Sbjct: 211 GGLVI----WRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESS-DQSNSGDEDETSSQH 265
Query: 789 VATLE-SNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED---------EGDE 838
++ E S+ + + EQ++ G G+ Q + L+ + + E D + + DE
Sbjct: 266 GSSHEKSSENPVVACAEQIHV--GEGNSQTIEYLNQSLSREKDTNHPVSSIKRLVFDADE 323
Query: 839 AYLEMYAGGNDNEDEI 854
L++ A GN NE +
Sbjct: 324 GNLDIRA-GNPNEQHV 338
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 439 PFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
P R P + L RK+A +++ P ++GR+ + G+A + ++K +A +
Sbjct: 903 PLRAAPLSNQERLVLRKQALQMKKR-----PVLSIGRNNAITGVAKTIKTHFKKHPLAIV 957
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+K T ++++ ++++ TG L+SR + ++ YRG
Sbjct: 958 NIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRG 996
>gi|326497411|dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/439 (47%), Positives = 294/439 (66%), Gaps = 19/439 (4%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK E +KLLDGLGPR+++W G DPLPVDAD+LP IVPG++ PFR+LP GV L +
Sbjct: 396 EVKLAKEDDKLLDGLGPRFSEWWGYDPLPVDADLLPAIVPGFRRPFRLLPSGVPPKLTDR 455
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLAR LP H+ALGRS LQGLA ++IKLWE+ +AKIA+KRG SE + E+
Sbjct: 456 EMTILRRLARPLPYHYALGRSSNLQGLAASIIKLWERCEVAKIAMKRGPYCIDSELVSEE 515
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ + +V YRGK+FL V+ A+++R + S+ ++ +
Sbjct: 516 LKGLTGGTLLSRDNESIVLYRGKDFLPQAVSLAIEKRRKHDNSMINKPK----------- 564
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P IE + A LK DA S G + E V E + Q +E +L++A
Sbjct: 565 PEIEESIPTQDASELKIANDA-SVHGHECHEG--ETSVSEYRTESLNTVAQNMETRLSQA 621
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ +AE+ L ++E++ + ++ + E I++EER+M RK+GL+MK FLLLGRRGVFDGT
Sbjct: 622 LTEKEKAEKLLEELEKASRSSKAETR-EVISEEERYMLRKVGLQMKPFLLLGRRGVFDGT 680
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
+ENMHLHWKYRELVKII K + + A LEAESGG+LV+V+++SKG+A+++YRGK+
Sbjct: 681 IENMHLHWKYRELVKIICKEHSMEDVTYAARTLEAESGGILVAVERVSKGHAIIMYRGKN 740
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGD 814
YQRPS+LRPK+LL K+ AL RS+ELQR+++L HV L N LR ++ MNS G +
Sbjct: 741 YQRPSSLRPKSLLNKKDALKRSVELQRRKSLKLHVLNLSKNIDYLRGQL--MNS--GHEN 796
Query: 815 EQLYDKLDSAYATEDDDSE 833
+ ++D D++ + + E
Sbjct: 797 KGMHDLCDNSRTSGETSKE 815
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 71/94 (75%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
ELTLP ELRRL+ + + + + ++ G+T+ +V+ IHE+W+ +E+V+++ + A+NM
Sbjct: 139 ELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNM 198
Query: 311 KRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP 344
+R HE+LERKTGGLVIWRSG+ + LYRG +Y+ P
Sbjct: 199 RRTHEVLERKTGGLVIWRSGSTIILYRGTNYKYP 232
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ GV +G V +H W+ ELVKI + ++ LE ++
Sbjct: 150 LQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNMRRTHEVLERKT 209
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP 758
GG+++ G +++YRG +Y+ P
Sbjct: 210 GGLVI----WRSGSTIILYRGTNYKYP 232
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 439 PFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
P + P R L RK+A +++ P A+GR+ + G+A + ++K +A +
Sbjct: 934 PSKAAPLSNRERLVLRKQALQMKKR-----PVLAIGRNNVITGVAKTIRTHFKKHPLAVV 988
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+K T ++++ ++++ TG L+SR + ++ YRG
Sbjct: 989 NIKNRADGTPVQQLISELEEATGSVLVSREPNKVILYRG 1027
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 243 RSSRTSLAEL--TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRL 300
++SR+S AE + E E LR + Q K + G+ ++ +H WK E+V++
Sbjct: 637 KASRSSKAETREVISEEERYMLRKVGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVKI 696
Query: 301 KIEGAPALNMKRMHEILERKTGGLVIW----RSGTAVSLYRGVSYEVPSVQLNKRIYKRN 356
+ ++ LE ++GG+++ G A+ +YRG +Y+ PS K + +
Sbjct: 697 ICKEHSMEDVTYAARTLEAESGGILVAVERVSKGHAIIMYRGKNYQRPSSLRPKSLLNKK 756
Query: 357 ELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVR 394
+ A + + Q S+ L + + D++R
Sbjct: 757 D--------ALKRSVELQRRKSLKLHVLNLSKNIDYLR 786
>gi|115476078|ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|38637564|dbj|BAD03815.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa Japonica Group]
Length = 725
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/575 (38%), Positives = 345/575 (60%), Gaps = 25/575 (4%)
Query: 224 FPWEKRKEEVAEGRWLVKRRSSRTSL---AELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
PW ++E + +V RR +T + AE L EL RLR + R K AG+
Sbjct: 125 VPWAAARDEETK---VVLRREKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGI 181
Query: 281 TQAVVDIIHEKW-KTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
T VV+ + +W K E+ ++I M R EILE KTGGLV+W G +YRG
Sbjct: 182 TDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGS 241
Query: 340 SYEVPSVQLNKRIYKRNE--LPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVK 397
SY + + + ++ NE P +S + + + + N +++++ ++
Sbjct: 242 SY-LENAKRHRDFVNYNEELSPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKGTL 300
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
YE EV +LLD LGPR+ DW PLPVDAD+LP +VP ++ PFR P GVR LA +E T
Sbjct: 301 YEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEELT 360
Query: 458 NLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKK 517
L++ AR LP HF LGR+ +LQGLA A++KLWEKS IAK+A+K G+Q T E+M ++K+
Sbjct: 361 YLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLKR 420
Query: 518 LTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI 577
LTGGT++ RNKD+++ YRGK+FL V E++ ERE Q +EE+ARL+ + + +
Sbjct: 421 LTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERESQVHDQQAKEEEARLKMADSLQMIV 480
Query: 578 ETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAE-- 635
+ GT +E D + +R ++ N + E ++H +LEK+L E
Sbjct: 481 GLSSERSYVGTFREYQDFHDSHARRTTEN---NFRIQLEAKKH-----RLEKELKDQEWR 532
Query: 636 -----RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGV 690
+K+ R+ + L+K+ S P+++ D E +T+EER +FRK+GL+M +LLGRRGV
Sbjct: 533 LSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGV 592
Query: 691 FDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVY 750
F+G +E +H HWK++E+VK+I K Q ++ LE E+GG L+++++ + +A+++Y
Sbjct: 593 FEGVIEEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFTTSHAIILY 652
Query: 751 RGKDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
RGK+Y+RP+ P NLLTKR+AL RSIE+QR+ ++
Sbjct: 653 RGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSM 687
>gi|222640429|gb|EEE68561.1| hypothetical protein OsJ_27045 [Oryza sativa Japonica Group]
Length = 725
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/575 (38%), Positives = 345/575 (60%), Gaps = 25/575 (4%)
Query: 224 FPWEKRKEEVAEGRWLVKRRSSRTSL---AELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
PW ++E + +V RR +T + AE L EL RLR + R K AG+
Sbjct: 125 VPWAAARDEETK---VVLRREKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGI 181
Query: 281 TQAVVDIIHEKW-KTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
T VV+ + +W K E+ ++I M R EILE KTGGLV+W G +YRG
Sbjct: 182 TDEVVEEVRGQWAKGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGS 241
Query: 340 SYEVPSVQLNKRIYKRNE--LPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVK 397
SY + + + ++ NE P +S + + + + N +++++ ++
Sbjct: 242 SY-LENAKRHRDFVNYNEELSPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKGTL 300
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
YE EV +LLD LGPR+ DW PLPVDAD+LP +VP ++ PFR P GVR LA +E T
Sbjct: 301 YEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEELT 360
Query: 458 NLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKK 517
L++ AR LP HF LGR+ +LQGLA A++KLWEKS IAK+A+K G+Q T E+M ++K+
Sbjct: 361 YLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLKR 420
Query: 518 LTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI 577
LTGGT++ RNKD+++ YRGK+FL V E++ ERE Q +EE+ARL+ + + +
Sbjct: 421 LTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERESQVHDQQAKEEEARLKMADSLQMIV 480
Query: 578 ETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAE-- 635
+ GT +E D + +R ++ N + E ++H +LEK+L E
Sbjct: 481 GLSSERSYVGTFREYQDFHDSHARRTTEN---NFRIQLEAKKH-----RLEKELKDQEWR 532
Query: 636 -----RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGV 690
+K+ R+ + L+K+ S P+++ D E +T+EER +FRK+GL+M +LLGRRGV
Sbjct: 533 LSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGV 592
Query: 691 FDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVY 750
F+G +E +H HWK++E+VK+I K Q ++ LE E+GG L+++++ + +A+++Y
Sbjct: 593 FEGVIEEIHQHWKHKEVVKVITKQNQASQITYTSMMLEVETGGTLIAIERFTTSHAIILY 652
Query: 751 RGKDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
RGK+Y+RP+ P NLLTKR+AL RSIE+QR+ ++
Sbjct: 653 RGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSM 687
>gi|116310121|emb|CAH67138.1| OSIGBa0130P02.2 [Oryza sativa Indica Group]
Length = 1048
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/409 (48%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++DW G DPLPVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 359 EVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYRRPFRLLPSGVPPRLTDR 418
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLAR LP H+ALGRS LQGLA +MIKLWE+ +AK+A+KRG + S+ + E
Sbjct: 419 EMTILRRLARPLPYHYALGRSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEK 478
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ + +VFYRGK+FL V+ A+++R + S + +++
Sbjct: 479 LKGLTGGTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKST---- 534
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P + K T +LD + + K+ D E V + Q +E +L++A
Sbjct: 535 PQNSSKLKMAT----DVSLDGHECYEKKHKD---ETAVSDNRAESLNVFTQNVEARLSQA 587
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ + E+ + ++E S +P+ R E I++EER+M RK+GL+MK+FLLLGRRGVFDGT
Sbjct: 588 IAEKEKTEKLIEELEMSSEPS-RAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGT 646
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
VENMHLHWKYRELVKII K + A LEAESGG+LV+V+++SK +A+++YRGK+
Sbjct: 647 VENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKN 706
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YQRPSTLRPK+LL K+ AL RS+E QR ++L HV L N L+ ++
Sbjct: 707 YQRPSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 755
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 71/97 (73%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL LP ELRRL+ + +++ ++ AG+T+ +V+ IHE+W+ +E+V+++ + A+NM
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 311 KRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ 347
KR HEILERKTGGLVIWRSG+ + LYRG Y+ P Q
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFQ 234
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
G+R++ L +G+ GV +G V +H W+ ELVKI + K+ LE ++GG++
Sbjct: 153 GIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLV 212
Query: 736 VSVDKISKGYAMVVYRGKDYQRP 758
+ G +++YRG DY+ P
Sbjct: 213 I----WRSGSTIILYRGTDYKYP 231
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 437 QPPFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
Q P P R L RK+A +++ P A+GR+ + G+A A+ ++K +A
Sbjct: 909 QLPSAAAPLSNRERLMLRKQALKMKKR-----PVLAVGRNNVITGVAKAIKTHFKKHPLA 963
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+ +K T ++++ ++++ TG L+SR + ++ YRG
Sbjct: 964 IVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRG 1004
>gi|224127512|ref|XP_002329296.1| predicted protein [Populus trichocarpa]
gi|222870750|gb|EEF07881.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/597 (39%), Positives = 340/597 (56%), Gaps = 74/597 (12%)
Query: 214 EEVGSDG-----EVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQ 268
+E+ +G E K PW R+E V G W +K+ S AEL+L + L RLR +
Sbjct: 102 QEISENGVLGFREKKLPWV-REERV--GNWRMKKEKV-VSKAELSLDKELLERLRGEAAK 157
Query: 269 TKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWR 328
++ ++K AG+TQ+VVD I W+TSE+ +K NM R +I+E TGGLV+W
Sbjct: 158 MRTWVKVKKAGVTQSVVDEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWT 215
Query: 329 SGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQ 388
+YRG +Y+ +K+N N T E
Sbjct: 216 RKDIHVVYRGCNYQ----------WKKN----------------------FNTATIEENL 243
Query: 389 ETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVR 448
T + +E E ++LLDGLGPR+ DW PLPVDAD+LP +V G++ P R+ P +R
Sbjct: 244 NTQPINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMR 303
Query: 449 STLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTS 508
S L E T L++LA+ LP HF LGR+R+LQGLA A++KLWEK+ IAKIA+K GV T +
Sbjct: 304 SKLKDDELTYLRKLAQSLPTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTNN 363
Query: 509 ERMVEDIK------------KLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAK 556
E+M +++K LTGG LL RNK F++ YRGK+FL V + +RE +
Sbjct: 364 EQMADELKAKIFLMLMLYTQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIALR 423
Query: 557 SLQDEEEQARLRA-SAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLD-------DSHK 608
Q EE AR++A +P T + GTL E + ++ K +++K
Sbjct: 424 KCQTNEEGARMKAIETSYMPGGPT--NTSRCGTLYEFQEFQIKFQKTAKGDSEIQLEAYK 481
Query: 609 ENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEE 668
E L E E+R Y ++ L+ K+ + + LSK+ + P+ R AD +T+EE
Sbjct: 482 EKL--ERELRNQEYRLRILKSKIEKPAKD-------LSKLNSAWVPSPRDADQGIMTEEE 532
Query: 669 RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALE 728
R FRK+GL+++ L+LGRRGVF+G +E +H HWK+RE+VK+I + F Q A LE
Sbjct: 533 RECFRKIGLKLRGSLVLGRRGVFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLE 592
Query: 729 AESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
AES G+LVSVDK+ +G+A+++YRGK+Y+RP L KNLLTKR+AL RS+ +QR +L
Sbjct: 593 AESDGILVSVDKLKEGHAIIIYRGKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSL 649
>gi|154986387|gb|ABS89147.1| CFM2 alternative polyadenylation form 2 [Zea mays]
Length = 783
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/392 (49%), Positives = 266/392 (67%), Gaps = 18/392 (4%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++ W G DP+PVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 370 EVKLAEEADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDR 429
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLA LP H+ALGRS LQGLA +MIKLWE+ +AKIALKR T SE + E+
Sbjct: 430 EMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEE 489
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K+LTGGTLLSR+K+ +VFYRGK+FL P V+ A+++R +L S + +
Sbjct: 490 VKELTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAK----------- 538
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P IE + LK + D + + + V E + + +E +L++A
Sbjct: 539 PGIEESMPTQNDSVLKVSSDVS------VHVREEGTSVTENRAGSLNTVAKDVETRLSQA 592
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ +AE+ + ++E++ P + E+I+++ER+M RK+GL+MK FLLLGRRGVFDGT
Sbjct: 593 IAEKAKAEKLIEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGT 651
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
+ENMHLHWKYRELVKII K + + A LEAESGG+LV+V+K+SKG+A++VYRGK+
Sbjct: 652 IENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKN 711
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
Y+RPS LRPK LL+KR AL RS+E QR + L
Sbjct: 712 YKRPSKLRPKTLLSKRDALKRSLENQRCKVWL 743
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 78/109 (71%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ S AEL LP ELRRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E
Sbjct: 126 SAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCE 185
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI 352
A+NM+R HEILERKTGGLVIWRSG+ + LYRG +Y P ++R+
Sbjct: 186 DVWAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERV 234
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ G+ +G V +H W+ E+VK+ + ++ LE ++
Sbjct: 144 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 203
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP---STLRPKNLLTKRKALARSIELQRQEALLKH 788
GG+++ G +++YRG +Y P + R + L K + +S E +H
Sbjct: 204 GGLVI----WRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESS-DQSNSGDEDETSSQH 258
Query: 789 VATLE-SNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED---------EGDE 838
++ E S+ + + EQ++ G G+ Q + L+ + + E D + + DE
Sbjct: 259 GSSHEKSSENPVVACAEQIHV--GEGNSQTIEYLNQSLSREKDTNHPVSSIKRLVFDADE 316
Query: 839 AYLEMYAGGNDNEDEI 854
L++ A GN NE +
Sbjct: 317 GNLDIRA-GNPNEQHV 331
>gi|302781424|ref|XP_002972486.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
gi|300159953|gb|EFJ26572.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
Length = 795
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 244/674 (36%), Positives = 356/674 (52%), Gaps = 91/674 (13%)
Query: 224 FPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQA 283
FPW++ A + LAELT+PE ELRRL+ + + + ++ G+T+A
Sbjct: 182 FPWQRESSSEAPTPVTRPQPPKLPCLAELTIPELELRRLQRIAIRVVNPIKVGYLGVTKA 241
Query: 284 VVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEV 343
VV IH +W+ E+V+++ + +M+ WR+G LYRG Y
Sbjct: 242 VVQDIHRRWQKCEVVKIQPKNWWLSSMEN--------------WRNG---HLYRGKGYFA 284
Query: 344 ---PSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYED 400
S+ N + Y+R ++ + D+ + S S + E + ++ + E +Y D
Sbjct: 285 RVDNSMVANLKKYQRRKINLMEAIKIRDEDEDRDYSQSEHGEARRDSEKGNI--EDEYLD 342
Query: 401 EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQ 460
E++ LL+ LGPRY DW G P+PVD D+LP VPGY+PP R+LPY + L+ E T L+
Sbjct: 343 EIDALLEELGPRYDDWIGRKPVPVDGDLLPASVPGYKPPLRMLPYRAKKNLSNMELTVLR 402
Query: 461 RLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTG 520
RL + LPPHF LGR+R LQGLA A++KLW+KS + KI LKRGVQ T ++ M E++++LTG
Sbjct: 403 RLVKPLPPHFVLGRNRGLQGLASAILKLWQKSELVKIGLKRGVQNTRNQLMAEELERLTG 462
Query: 521 GTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSIETI 580
G LLSR+K F+ YRGK+FL V L+ERE + L +E+Q R+ A
Sbjct: 463 GVLLSRDKFFITLYRGKDFLPTSVAAVLRERESNMRELLLKEDQVRIPAQI----GDGQN 518
Query: 581 EKSGTAGTLKETLDANSRW----GKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAER 636
+ +G+L E+++ +W ++ D+ + + V +VR ++LE KLA A
Sbjct: 519 RTTPVSGSLSESMEMRRQWEAQRSEKDDEMDRNSAVVALKVREQ----KRLEAKLAAAIS 574
Query: 637 KLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 696
K RA+ + K+E SL +E D E+IT+EER+MF+KLGLRM AFLL+GRRGVFDG +E
Sbjct: 575 KKRRADLQIVKLERSLLLSEHPRDRETITEEERYMFKKLGLRMDAFLLIGRRGVFDGVIE 634
Query: 697 NMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
NMHLHWK+RELVK+I+K K A ++A LE ESGG+LV V
Sbjct: 635 NMHLHWKHRELVKLILKEKDKAIALEVAKMLEIESGGILVGV------------------ 676
Query: 757 RPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQM---NSVKGTG 813
AL H+ LE +LR + + + N++ T
Sbjct: 677 ---------------------------ALQLHIEKLEELIMKLRKDYDYLLKSNALPDTP 709
Query: 814 DEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQD 873
LY +DS Y +D D E D L +D++DE+ S L+ E +
Sbjct: 710 HSALYKAIDSKYQEDDIDGELLADRKKLH-----HDDDDEMAYSDDLLDSE----ISSDG 760
Query: 874 QESETELMDSESEA 887
ESE E EA
Sbjct: 761 SESEAERFRPPEEA 774
>gi|218201029|gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 198/484 (40%), Positives = 305/484 (63%), Gaps = 16/484 (3%)
Query: 310 MKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNEL-PASSVSQATD 368
M R EILE KTGGLV+W G +YRG SY + Q + EL P +S + +
Sbjct: 1 MDRAREILEIKTGGLVVWTRGGIHFVYRGSSYLENAKQHRDFVNYNEELSPVTSNNPTSQ 60
Query: 369 KQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADM 428
+ + N +++++ ++ YE EV +LLD LGPR+ DW PLPVDAD+
Sbjct: 61 GKYWSKDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADL 120
Query: 429 LPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKL 488
LP +VP ++ PFR P GVR TLA +E T L++ AR LP HF LGR+ +LQGLA A++KL
Sbjct: 121 LPEVVPDFKTPFRQCPPGVRPTLADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKL 180
Query: 489 WEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEAL 548
WEKS IAK+A+K G+Q + E+M ++K+LTGGT++ RNKD+++ YRGK+FL V E++
Sbjct: 181 WEKSLIAKVAVKVGIQNSNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESV 240
Query: 549 QERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHK 608
E+E Q +EE+ARL+ + + + + GT +E D + +R ++
Sbjct: 241 IEQESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARRTTEN-- 298
Query: 609 ENLVREAEVRRHAYLVQKLEKKLARAE-------RKLLRAERALSKVEESLKPAERQADP 661
N + E ++H +LEK+L E +K+ R+ + L+K+ S P+++ D
Sbjct: 299 -NFRIQLEAKKH-----RLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDR 352
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAK 721
E +T+EER +FRK+GL+M +LLGRRGVF+G +E +H HWK++E+VK+I K +Q
Sbjct: 353 ELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQIT 412
Query: 722 KIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQR 781
++ LE E+GG L+++++ + +A+++YRGK+Y+RP+ P NLLTKR+AL RSIE+QR
Sbjct: 413 YTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQR 472
Query: 782 QEAL 785
+ ++
Sbjct: 473 RGSM 476
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L E E R R + + + G+ + V++ IH+ WK E+V++ + A +
Sbjct: 355 LTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQITYT 414
Query: 314 HEILERKTGGLVI----WRSGTAVSLYRGVSYEVPS 345
+LE +TGG +I + + A+ LYRG +Y P+
Sbjct: 415 SMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPT 450
>gi|296087258|emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 271/411 (65%)
Query: 375 ISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVP 434
IS N+ E ++ V YE E ++LLDGLGPR+ DW PLPVDAD+LP ++P
Sbjct: 47 ISQLQNIFKRCEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLP 106
Query: 435 GYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSI 494
G++PPFR+ P RS L E T L++LA LP HF LGR+R+LQGLA A++KLWEKS I
Sbjct: 107 GFRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLI 166
Query: 495 AKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERL 554
KIA+K G+ T +E+M ++K LTGG LL RNK F++ YRGK+FL V + ERE
Sbjct: 167 VKIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREME 226
Query: 555 AKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVRE 614
K Q EE ARL+A + + + + T GTL E + + + D + + + E
Sbjct: 227 FKGCQIREEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELE 286
Query: 615 AEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRK 674
AE R ++K E+ L +RK+ R+ + L+K+ + +PA+ AD E IT+EER FRK
Sbjct: 287 AEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRK 346
Query: 675 LGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGV 734
+G +M + LLLGRRGVFDG +E +H HWK+RE+VK+I ++F Q A LE+ESGGV
Sbjct: 347 IGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGV 406
Query: 735 LVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
LVS+DK+ +G+A+++YRGK+Y+RP L PKNLLTKR+AL RS+E+QR +L
Sbjct: 407 LVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSL 457
>gi|186523322|ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|332004875|gb|AED92258.1| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
Length = 720
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 325/568 (57%), Gaps = 57/568 (10%)
Query: 223 KFPWEKRKEEVAEGRWLVKR--RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
K PWE+ +E R++++R + S + AEL L E L RLR + + ++ AG+
Sbjct: 179 KMPWEREEE-----RFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGV 233
Query: 281 TQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVS 340
T+ VV+ I WK +E+ ++ + NM+R EI+E KTGGLV+ + +YRG
Sbjct: 234 TELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG-- 291
Query: 341 YEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYED 400
S S+ D +IS S+ YE
Sbjct: 292 ------------------GPSYSSEGQD-----EISSSL------------------YER 310
Query: 401 EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQ 460
E ++LLDGLGPRY DW P PVDAD+LP +V GY P R P R+ L +E T L+
Sbjct: 311 EADRLLDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLR 370
Query: 461 RLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTG 520
+A+ LP HF LGR+ LQGLA A++KLWEK IAKIA+K G T +E M ++++ LTG
Sbjct: 371 NIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYLTG 430
Query: 521 GTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF--VLPSIE 578
G L+ RNK +V YRGK+FLS +V + +++RERL Q EE R V+ + +
Sbjct: 431 GVLILRNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTNGK 490
Query: 579 TIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKL 638
++++ +GTL E + ++G + NL EAE R ++ E KL+ + K+
Sbjct: 491 QLKETNKSGTLLEFQELQRKFG----EMDPRNLETEAEKARLEKELKSQEHKLSILKSKI 546
Query: 639 LRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENM 698
++ L K+ KP+E D E +T+EER R++GL+M + L+LGRRGVF G +E +
Sbjct: 547 EKSNMELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGL 606
Query: 699 HLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRP 758
H HWK+RE+ K+I K F + A ALE ES GVL+S++K+ +G+A+++YRGK+Y+RP
Sbjct: 607 HQHWKHREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRP 666
Query: 759 ST-LRPKNLLTKRKALARSIELQRQEAL 785
S+ L +NLLTKRKAL RS+ +QR +L
Sbjct: 667 SSKLMAQNLLTKRKALQRSVVMQRLGSL 694
>gi|9755828|emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 324/568 (57%), Gaps = 59/568 (10%)
Query: 223 KFPWEKRKEEVAEGRWLVKR--RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGL 280
K PWE+ +E R++++R + S + AEL L E L RLR + + ++ AG+
Sbjct: 179 KMPWEREEE-----RFILRRMKKESVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGV 233
Query: 281 TQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVS 340
T+ VV+ I WK +E+ ++ + NM+R EI+E TGGLV+ + +YRG
Sbjct: 234 TELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIE--TGGLVVLSKKEFLVVYRG-- 289
Query: 341 YEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYED 400
S S+ D +IS S+ YE
Sbjct: 290 ------------------GPSYSSEGQD-----EISSSL------------------YER 308
Query: 401 EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQ 460
E ++LLDGLGPRY DW P PVDAD+LP +V GY P R P R+ L +E T L+
Sbjct: 309 EADRLLDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLR 368
Query: 461 RLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTG 520
+A+ LP HF LGR+ LQGLA A++KLWEK IAKIA+K G T +E M ++++ LTG
Sbjct: 369 NIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYLTG 428
Query: 521 GTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF--VLPSIE 578
G L+ RNK +V YRGK+FLS +V + +++RERL Q EE R V+ + +
Sbjct: 429 GVLILRNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTNGK 488
Query: 579 TIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKL 638
++++ +GTL E + ++G + NL EAE R ++ E KL+ + K+
Sbjct: 489 QLKETNKSGTLLEFQELQRKFG----EMDPRNLETEAEKARLEKELKSQEHKLSILKSKI 544
Query: 639 LRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENM 698
++ L K+ KP+E D E +T+EER R++GL+M + L+LGRRGVF G +E +
Sbjct: 545 EKSNMELFKLNSLWKPSEGDDDIEILTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGL 604
Query: 699 HLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRP 758
H HWK+RE+ K+I K F + A ALE ES GVL+S++K+ +G+A+++YRGK+Y+RP
Sbjct: 605 HQHWKHREVAKVITMQKLFSRVVYTAKALETESNGVLISIEKLKEGHAILIYRGKNYKRP 664
Query: 759 ST-LRPKNLLTKRKALARSIELQRQEAL 785
S+ L +NLLTKRKAL RS+ +QR +L
Sbjct: 665 SSKLMAQNLLTKRKALQRSVVMQRLGSL 692
>gi|357454755|ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355486706|gb|AES67909.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 880
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/502 (40%), Positives = 296/502 (58%), Gaps = 47/502 (9%)
Query: 320 KTGGLVIWRSGTAVSLYRGVSYE-------------VPSVQLNKRIYKRNELPASSVSQA 366
KTGGLV+W A+ +YRG +Y+ +PS + N Y+ N + +++
Sbjct: 299 KTGGLVVWSKKDALVVYRGCNYKLTSKGSTKIDTGYIPSRKTNS--YEMNGVKLATIGDL 356
Query: 367 ----TDKQIHKQISMSVN----LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPG 418
+D+ + S + + L T + YE E ++LLDGLGPR+ DW
Sbjct: 357 YRAESDRSTSELPSWNADHKHSLSTDIHDMNYQPANGSLYERECDRLLDGLGPRFIDWWM 416
Query: 419 CDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQL 478
PLPVDAD+LP +VPG++PP R+ P + L E T +R++ LP HF LGR+R L
Sbjct: 417 HKPLPVDADLLPEVVPGFEPPLRICPPHASAKLTDGELTYFRRISHPLPTHFVLGRNRGL 476
Query: 479 QGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKN 538
QGLA A++KLW KS IAKIA+K GVQ T +E M ++K+LTGG LL RNK +++ YRGK+
Sbjct: 477 QGLAAAILKLWHKSHIAKIAIKYGVQNTDNETMANELKRLTGGVLLLRNKFYILLYRGKD 536
Query: 539 FLSPDVTEALQERERLAKSLQDEEEQARLRA-------SAFVLPSIETIEKSGTAGTLKE 591
FL V + ++ RE KS Q +EE AR++A F LP + + T+GTL E
Sbjct: 537 FLPRRVADLVERRELELKSCQLDEEVARMKAIQAFSSIDEFPLP-----QGTSTSGTLTE 591
Query: 592 TLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEES 651
+ ++ + + + ++ EAE+ R +++ ++K +K+ R+ LSK+ +
Sbjct: 592 FRNIQNKLDEMKEVNVDLSIPLEAEIYRLEKELKEQQRKAFILNKKIERSTMELSKLNAA 651
Query: 652 LKPAERQADPESITDEERFMFRKLGLRMKAFLLL------------GRRGVFDGTVENMH 699
KP+ D E +TDEER FRK+GL+M++ L+L GRRGVFDG +E +H
Sbjct: 652 WKPSGEDIDLEIMTDEERECFRKMGLKMRSCLVLGKAISLHSTTSAGRRGVFDGVLEGLH 711
Query: 700 LHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPS 759
HWK+RE+ K+I + + + LE ESGG+LVSVD++ +GYA+++YRGK+Y RPS
Sbjct: 712 QHWKHREVAKVITMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIIIYRGKNYSRPS 771
Query: 760 TLRPKNLLTKRKALARSIELQR 781
KNLLTKRKAL RS+E+QR
Sbjct: 772 EKIAKNLLTKRKALRRSLEMQR 793
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 223 KFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQ 282
+ PWE R E+V +L ++ + A+LTL + L+RLR+ + ++K AG+TQ
Sbjct: 139 RMPWE-RDEKVD---FLKVKKEKIVTAADLTLDKVLLQRLRSEAAIMRIWVKVKKAGVTQ 194
Query: 283 AVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILE 318
VV+ I W+T+E+ +K + NM R EI+E
Sbjct: 195 DVVNQIKRTWRTNELAMVKFDIPLCQNMDRAREIVE 230
>gi|297807647|ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 224/601 (37%), Positives = 324/601 (53%), Gaps = 85/601 (14%)
Query: 223 KFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQ 282
K PW+ R+EE R + K R T AEL L E L RLR + + ++ AG+T+
Sbjct: 148 KMPWD-REEERFIMRRMKKERVPTT--AELILDEGLLNRLRREASKMRKWVNVRKAGVTE 204
Query: 283 AVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
VV+ I WK E+ ++ + NM+R EI+E KTGGLV+ + +YRG
Sbjct: 205 TVVNEIRLIWKLKELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG---- 260
Query: 343 VPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEV 402
S S + +IS S+ YE E
Sbjct: 261 -----------------GPSYSSEETRSGQDEISSSL------------------YEREA 285
Query: 403 EKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRL 462
++LLDGLGPRY DW P PVDAD+LP +V GY+ P R P R+ L+ +E T L+ +
Sbjct: 286 DRLLDGLGPRYLDWWMRRPFPVDADLLPQVVNGYRTPSRRCPPNTRAKLSDEELTYLRNI 345
Query: 463 ARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGT 522
A+ LP HF LGR+ LQGLA A++KLWEK IAKIA+K G T +E M +++K LTGG
Sbjct: 346 AQALPFHFVLGRNHGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELKHLTGGV 405
Query: 523 LLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLPSI---ET 579
L+ RNK ++ YRGK+FLS +VT+ + +RERL + Q EE R +L + +
Sbjct: 406 LILRNKYLIILYRGKDFLSDEVTDLVDDRERLLRGYQHFEETKR-EGDIEILEVVTDGKQ 464
Query: 580 IEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLL 639
++++ +GTL E + ++G + NL EAE R ++ E KL+ + K+
Sbjct: 465 LKETSKSGTLLEFQELQRKFG----EMETRNLETEAEKARLEKELKSQEHKLSILKSKIE 520
Query: 640 RAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL--------------- 684
++ L K+ KP+ER D E T+EER R++GL+M + L+
Sbjct: 521 KSTMELFKLNSLWKPSERDDDIEIFTNEERECLRRIGLKMSSSLVLGRSNRIHSCLLLIP 580
Query: 685 -------------------LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIAL 725
LGRRGVF G +E +H HWK+RE+ K+I K F + A
Sbjct: 581 YPLAMRLIYINFIFVFVSFLGRRGVFVGIMEGLHQHWKHREVAKVITMQKIFSRVVYTAK 640
Query: 726 ALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPST-LRPKNLLTKRKALARSIELQRQEA 784
+LEAES GVL+S++K+ +G+A+++YRGK+Y+RPS+ L +NLLTKRKAL RS+ +QR +
Sbjct: 641 SLEAESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVAMQRLGS 700
Query: 785 L 785
L
Sbjct: 701 L 701
>gi|125590660|gb|EAZ31010.1| hypothetical protein OsJ_15093 [Oryza sativa Japonica Group]
Length = 818
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/409 (43%), Positives = 250/409 (61%), Gaps = 48/409 (11%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++DW G DPLPVDAD+LP IVPGY+
Sbjct: 165 EVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------- 207
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
RS LQGLA +MIKLWE+ +AK+A+KRG + S+ + E
Sbjct: 208 -------------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEK 248
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ + +VFYRGK+FL V+ A+++R + S + +++
Sbjct: 249 LKGLTGGTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKST---- 304
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P + K T +LD + + K+ D E V + Q +E +L++A
Sbjct: 305 PQNSSKLKMAT----DVSLDGHECYEKKHKD---ETAVSDNRAESLNVFAQNVEARLSQA 357
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ + E+ + ++E S +P+ R E I++EER+M RK+GL+MK+FLLLGRRGVFDGT
Sbjct: 358 IAEKEKTEKLIEELEMSSEPS-RAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGT 416
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
VENMHLHWKYRELVKII K + A LEAESGG+LV+V+++SK +A+++YRGK+
Sbjct: 417 VENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKN 476
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YQRPSTLRPK+LL K+ AL RS+E QR ++L HV L N L+ ++
Sbjct: 477 YQRPSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 525
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 308 LNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP 344
+NMKR HEILERKTGGLVIWRSG+ + LYRG Y+ P
Sbjct: 1 MNMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYP 37
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 437 QPPFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
Q P P R L RK+A +++ P A+GR+ + G+A A+ ++K +A
Sbjct: 679 QLPSAAAPLSNRERLMLRKQALKMKKR-----PVLAVGRNNVITGVAKAIKTHFKKHPLA 733
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG------KNFLSPDVTEALQ 549
+ +K T ++++ ++++ TG L+SR + ++ YRG +N LS + +
Sbjct: 734 IVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQV 793
Query: 550 ERERLAKSL 558
E+E ++ L
Sbjct: 794 EKEVISPQL 802
>gi|218194999|gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
Length = 818
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/409 (43%), Positives = 250/409 (61%), Gaps = 48/409 (11%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++DW G DPLPVDAD+LP IVPGY+
Sbjct: 165 EVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------- 207
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
RS LQGLA +MIKLWE+ +AK+A+KRG + S+ + E
Sbjct: 208 -------------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEK 248
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ + +VFYRGK+FL V+ A+++R + S + +++
Sbjct: 249 LKGLTGGTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKST---- 304
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P + K T +LD + + K+ D E V + Q +E +L++A
Sbjct: 305 PQNSSKLKMAT----DVSLDGHECYEKKHKD---ETAVSDNRAESLNVFTQNVEARLSQA 357
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ + E+ + ++E S +P+ R E I++EER+M RK+GL+MK+FLLLGRRGVFDGT
Sbjct: 358 IAEKEKTEKLIEELEMSSEPS-RAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGT 416
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
VENMHLHWKYRELVKII K + A LEAESGG+LV+V+++SK +A+++YRGK+
Sbjct: 417 VENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKN 476
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YQRPSTLRPK+LL K+ AL RS+E QR ++L HV L N L+ ++
Sbjct: 477 YQRPSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 525
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 308 LNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP 344
+NMKR HEILERKTGGLVIWRSG+ + LYRG Y+ P
Sbjct: 1 MNMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYP 37
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 437 QPPFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
Q P P R L RK+A +++ P A+GR+ + G+A A+ ++K +A
Sbjct: 679 QLPSAAAPLSNRERLMLRKQALKMKKR-----PVLAVGRNNVITGVAKAIKTHFKKHPLA 733
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG------KNFLSPDVTEALQ 549
+ +K T ++++ ++++ TG L+SR + ++ YRG +N LS + +
Sbjct: 734 IVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQV 793
Query: 550 ERERLAKSL 558
E+E ++ L
Sbjct: 794 EKEVISPQL 802
>gi|21741981|emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa Japonica Group]
Length = 1012
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 179/409 (43%), Positives = 250/409 (61%), Gaps = 48/409 (11%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++DW G DPLPVDAD+LP IVPGY+
Sbjct: 359 EVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------- 401
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
RS LQGLA +MIKLWE+ +AK+A+KRG + S+ + E
Sbjct: 402 -------------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEK 442
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ + +VFYRGK+FL V+ A+++R + S + +++
Sbjct: 443 LKGLTGGTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKST---- 498
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P + K T +LD + + K+ D E V + Q +E +L++A
Sbjct: 499 PQNSSKLKMAT----DVSLDGHECYEKKHKD---ETAVSDNRAESLNVFAQNVEARLSQA 551
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ + E+ + ++E S +P+ R E I++EER+M RK+GL+MK+FLLLGRRGVFDGT
Sbjct: 552 IAEKEKTEKLIEELEMSSEPS-RAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGT 610
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
VENMHLHWKYRELVKII K + A LEAESGG+LV+V+++SK +A+++YRGK+
Sbjct: 611 VENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKN 670
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YQRPSTLRPK+LL K+ AL RS+E QR ++L HV L N L+ ++
Sbjct: 671 YQRPSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 719
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 70/94 (74%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL LP ELRRL+ + +++ ++ AG+T+ +V+ IHE+W+ +E+V+++ + A+NM
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 311 KRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP 344
KR HEILERKTGGLVIWRSG+ + LYRG Y+ P
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYP 231
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
G+R++ L +G+ GV +G V +H W+ ELVKI + K+ LE ++GG++
Sbjct: 153 GIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLV 212
Query: 736 VSVDKISKGYAMVVYRGKDYQRP 758
+ G +++YRG DY+ P
Sbjct: 213 I----WRSGSTIILYRGTDYKYP 231
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 437 QPPFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
Q P P R L RK+A +++ P A+GR+ + G+A A+ ++K +A
Sbjct: 873 QLPSAAAPLSNRERLMLRKQALKMKKR-----PVLAVGRNNVITGVAKAIKTHFKKHPLA 927
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG------KNFLSPDVTEALQ 549
+ +K T ++++ ++++ TG L+SR + ++ YRG +N LS + +
Sbjct: 928 IVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQV 987
Query: 550 ERERLAKSL 558
E+E ++ L
Sbjct: 988 EKEVISPQL 996
>gi|297602873|ref|NP_001053020.2| Os04g0464800 [Oryza sativa Japonica Group]
gi|255675534|dbj|BAF14934.2| Os04g0464800 [Oryza sativa Japonica Group]
Length = 1042
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/409 (43%), Positives = 250/409 (61%), Gaps = 48/409 (11%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++DW G DPLPVDAD+LP IVPGY+
Sbjct: 359 EVKLAEEADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------- 401
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
RS LQGLA +MIKLWE+ +AK+A+KRG + S+ + E
Sbjct: 402 -------------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEK 442
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K LTGGTLLSR+ + +VFYRGK+FL V+ A+++R + S + +++
Sbjct: 443 LKGLTGGTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKST---- 498
Query: 575 PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 634
P + K T +LD + + K+ D E V + Q +E +L++A
Sbjct: 499 PQNSSKLKMAT----DVSLDGHECYEKKHKD---ETAVSDNRAESLNVFAQNVEARLSQA 551
Query: 635 ERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 694
+ + E+ + ++E S +P+ R E I++EER+M RK+GL+MK+FLLLGRRGVFDGT
Sbjct: 552 IAEKEKTEKLIEELEMSSEPS-RAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGT 610
Query: 695 VENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD 754
VENMHLHWKYRELVKII K + A LEAESGG+LV+V+++SK +A+++YRGK+
Sbjct: 611 VENMHLHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKN 670
Query: 755 YQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YQRPSTLRPK+LL K+ AL RS+E QR ++L HV L N L+ ++
Sbjct: 671 YQRPSTLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 719
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 70/94 (74%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL LP ELRRL+ + +++ ++ AG+T+ +V+ IHE+W+ +E+V+++ + A+NM
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 311 KRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVP 344
KR HEILERKTGGLVIWRSG+ + LYRG Y+ P
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYP 231
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
G+R++ L +G+ GV +G V +H W+ ELVKI + K+ LE ++GG++
Sbjct: 153 GIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLV 212
Query: 736 VSVDKISKGYAMVVYRGKDYQRP 758
+ G +++YRG DY+ P
Sbjct: 213 I----WRSGSTIILYRGTDYKYP 231
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 437 QPPFRVLPYGVRSTLA-RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 495
Q P P R L RK+A +++ P A+GR+ + G+A A+ ++K +A
Sbjct: 873 QLPSAAAPLSNRERLMLRKQALKMKKR-----PVLAVGRNNVITGVAKAIKTHFKKHPLA 927
Query: 496 KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+ +K T ++++ ++++ TG L+SR + ++ YRG
Sbjct: 928 IVNIKNRADGTPIQQLISELEEATGSVLVSREPNKVILYRG 968
>gi|168014862|ref|XP_001759970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688720|gb|EDQ75095.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 512
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 280/492 (56%), Gaps = 53/492 (10%)
Query: 316 ILERKTGGLVIWRSGTAVSLYRGVSYEVP----SVQLNKRIYKRNELPASSVSQATDKQI 371
+L+R TGG+VIWR G AV +YRG Y VP + L + Y++ + +Q+
Sbjct: 1 LLQRLTGGIVIWREGPAVVIYRGKDY-VPVWMRKMDLREEAYRKRLQLLDCDEEDESRQL 59
Query: 372 HKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPG 431
+ E S + +T+ ++E E+E L+D LGP++ W PVD D+L
Sbjct: 60 ME--------EGTSYDCQTNMIQE----SEIEDLMDDLGPQFVGWIEGGRAPVDGDLL-- 105
Query: 432 IVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEK 491
+ + PFR LPYGVR L E T ++ LA+ LPPHF LG+ R L+GLA A++KLWEK
Sbjct: 106 VNSNFNSPFRRLPYGVRPRLTNFEMTEMRHLAKKLPPHFVLGQCRGLEGLASAIVKLWEK 165
Query: 492 SSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 551
S +AKIA+KRGV ++RM ++ +LTGG L++RN ++ YRG +FL V L+E+
Sbjct: 166 SEVAKIAMKRGVSRIVNDRMASELIRLTGGDLIARNMSYIALYRGNSFLPAIVKGTLKEK 225
Query: 552 ERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENL 611
+ +A++L ++EE+ RL A+ + + + ++ L++ S + H+ +L
Sbjct: 226 DHIARTLLEDEERNRL-AAILARKAARDLARQ----RMQRILNSVSSFSYNFC-IHRSSL 279
Query: 612 ------VREAEVRRHAYLVQKLEKK-------LARAERKLLRAERALSKVEESLKPAERQ 658
+ ++ AY+V +E + L +K+ AER L + +KP +
Sbjct: 280 KFGLFLLSSIFMKISAYMVIDIEIRFKPIRIGLNVVSQKISSAERELLNLNLKMKPKDMH 339
Query: 659 ADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTF- 717
A E +T+EE + RK+GLRMK +LLLGRR VF G +ENMHLHWK+R+LVKIIVK F
Sbjct: 340 ASKEDVTEEEMYTLRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSYFM 399
Query: 718 ----DQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPST----------LRP 763
D + IA LE ESGGVLV + I G A++VYRGK+YQRP+ LRP
Sbjct: 400 YRERDDIENIARMLEIESGGVLVGICTIPVGEAIIVYRGKNYQRPNDGISPQGHPDGLRP 459
Query: 764 KNLLTKRKALAR 775
LLTK++A R
Sbjct: 460 CGLLTKKQAWER 471
>gi|147852955|emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
Length = 1399
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 238/414 (57%), Gaps = 39/414 (9%)
Query: 143 STMGKIVEKLKKFGYVGDGDGDGDGDNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARG 202
+ + +I EKL+ GYV D DE R GS +IF LP R
Sbjct: 272 TAIQRIAEKLRSLGYV---------DGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRV 322
Query: 203 GFSKESPLGLGE----EVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESE 258
G + + L E E G+ G + E RKE E + + K +LAELTLPE E
Sbjct: 323 GHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDERAPTLAELTLPEEE 382
Query: 259 LRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILE 318
LRRL+ + Q + K ++ AG+T+ +V+ IHE+W+ +E+V+++ E LNMKR H+ILE
Sbjct: 383 LRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILE 442
Query: 319 RKTGGLVIWRSGTAVSLYRGVSYEVP------------------SVQLNKRIYKRNELPA 360
RKTGGLVIWRSG+ + LYRG +Y+ P Q+N + E+ +
Sbjct: 443 RKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCS 502
Query: 361 SS---VSQATDKQIHKQISMSVNLETASEEQETDF--VREVKYEDEVEKLLDGLGPRYTD 415
S V A +K +S+ ++ F E + E+E ++LLDGLGPR+TD
Sbjct: 503 SGKGDVKSAGPMPANKIAPLSL-IQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTD 561
Query: 416 WPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRS 475
W G DPLP+DAD+LP +VPGY+ PFR+LPYG++ L E T L+RL R LP HFALGR+
Sbjct: 562 WWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRN 621
Query: 476 RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKD 529
R+LQGLA +MIKLWEK IAKIA+KRGVQ T SE M E++K +G ++ K+
Sbjct: 622 RKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK--SGSSIFGNCKN 673
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 226/395 (57%), Gaps = 41/395 (10%)
Query: 511 MVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE-EQARLRA 569
++E+++ LTGGTLLSR+++F+VFYRGK+FL P V+ A++ R + ++ + RL
Sbjct: 840 ILEEVRNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAI 899
Query: 570 SAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEK 629
+A + GT + D + DD +L + +R +V++
Sbjct: 900 NA----------EESELGTSEHASDKDC---DGTDDQKTNSLSKRRMLRSAEAVVERTSI 946
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL+ A K RAE+ L+++EE+ P + + D E IT+EER+M RK+GLRMK FLLLGRRG
Sbjct: 947 KLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRG 1006
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
+FDGTVENMHLHWKYRELVKII ++ + +A LEAESGG+LV+V+++SKGYA+++
Sbjct: 1007 IFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIM 1066
Query: 750 YRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSV 809
YRGK+Y+RP++LRP+ LL KR+A+ RS+E QR+E N
Sbjct: 1067 YRGKNYKRPASLRPQTLLNKREAMKRSLEAQRREF--------------------SRNKD 1106
Query: 810 KGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLEMESDFPY 869
K T +QL DK A E G + L + G D+ + ++HN + DFP
Sbjct: 1107 KETNSKQLVDKSRLHLA-----RERYGADVILIHSSDGMDSSRDSLQTSHN-DKRIDFPS 1160
Query: 870 HAQDQESETELMDSESEAYTVHSTYCASTDIVEED 904
D +++ + SE+ TD+ EE+
Sbjct: 1161 MC-DSDTDEANPEPSSESVLKEIETNVLTDMNEEE 1194
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 636 RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 695
RK ++ E+ L + E+ P + ++ +EE + +G++++ L +G+ G+ +G V
Sbjct: 353 RKEVKREKKLVRKEDERAPTLAEL---TLPEEELRRLKGIGIQIRKKLKVGKAGITEGIV 409
Query: 696 ENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+H W+ E+VKI + K+ LE ++GG+++ G +++YRG +Y
Sbjct: 410 NGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVI----WRSGSYIILYRGANY 465
Query: 756 QRPSTLRPKNL 766
+ P L NL
Sbjct: 466 KYPYFLSDNNL 476
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 439 PFRVLPYGVRS-TLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKI 497
PFR P R L RK+A +++ P A+GRS + G+A + ++K +A +
Sbjct: 1248 PFRAAPLSNRERLLLRKQALRMKKR-----PVIAVGRSNIVTGVAKTIKAHFQKHPLAIV 1302
Query: 498 ALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
+K + T+ + +V +++ TG L+S+ ++ YRG
Sbjct: 1303 NVKGRAKGTSVQEVVFKLEQATGAVLVSQEPSKVILYRG 1341
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
+ E E LR + + K + G+ V+ +H WK E+V++ G ++ +
Sbjct: 981 ITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGV 1040
Query: 314 HEILERKTGGLVI----WRSGTAVSLYRGVSYEVPS-----VQLNKRIYKRNELPAS--S 362
LE ++GG+++ G A+ +YRG +Y+ P+ LNKR + L A
Sbjct: 1041 ARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREAMKRSLEAQRRE 1100
Query: 363 VSQATDKQIH-KQISMSVNLETASEEQETDFV 393
S+ DK+ + KQ+ L A E D +
Sbjct: 1101 FSRNKDKETNSKQLVDKSRLHLARERYGADVI 1132
>gi|326492864|dbj|BAJ90288.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 630
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 189/500 (37%), Positives = 276/500 (55%), Gaps = 36/500 (7%)
Query: 213 GEEVGSDGEVK-FPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQT-K 270
GEE G DG + PW ++E + ++++ + + AE L +EL RLR T
Sbjct: 112 GEEAGGDGNGRPAPWSAARDEGLKAALRRQKKARQPTPAERLLDPAELDRLRRAARGTGD 171
Query: 271 SKTRIKGAGLTQAVVDIIHEKWKTS-EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRS 329
R K AG+T VV+ + W E+ +++ M R EILE K+GGLV+W
Sbjct: 172 GWLRAKKAGVTDEVVEDVCRVWSGGQELAAVRVVEPLRRCMDRAREILEIKSGGLVVWTK 231
Query: 330 GTAVSLYRGVSY------------EVPSVQLNKRI-----YKRNELPASSVSQATDKQ-I 371
G +YRG SY ++ V L K +K S + D +
Sbjct: 232 GDVHFVYRGSSYLENIKHRQKSIADIQRVPLEKCTAPGPQWKHESNAEPSTNHNDDAHGV 291
Query: 372 HKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPG 431
+ I S+ + E E YE EV +LLD LGPR+ DW PLPVDAD+LP
Sbjct: 292 FRGIDPSLAVHAYEEPVEGTL-----YEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPE 346
Query: 432 IVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEK 491
+VPG++ PFR P GVR TLA +E T L++LAR LP HFALGR+ +LQGLA A++KLWEK
Sbjct: 347 VVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKLWEK 406
Query: 492 SSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQER 551
S IAKIA+K G+Q T +E+M ++K LTGGT++ RNKDF++ YRGK+FL V +++ E+
Sbjct: 407 SLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNKDFVILYRGKDFLPGGVKQSVIEQ 466
Query: 552 ERLAKSLQDEEEQARLRASAFV-----LPSIETIEKSGTAGTLKETLDANSRWGKRLDDS 606
E + Q +EE+ARL + LPS E+ + G+ + D + ++
Sbjct: 467 EARVYAQQVKEEEARLMVMDSLKMFAGLPSEES-----SVGSFRGYQDFQLNHVQETTEN 521
Query: 607 HKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITD 666
+ + EAE R ++ E++L +K+ R+ AL+K+ S P+E+ AD E +T+
Sbjct: 522 NMALIELEAEKHRLEKELKDQERRLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTE 581
Query: 667 EERFMFRKLGLRMKAFLLLG 686
EER +FRK+GL+M +LLG
Sbjct: 582 EERMIFRKIGLKMDEHVLLG 601
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 645 LSKVEESLKPAERQADP---ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLH 701
L +V K RQ P ++ DEE RKL + LGR G +
Sbjct: 344 LPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVLKL 403
Query: 702 WKYRELVKIIVKVKTFD-QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPST 760
W+ + KI VKV + +++A L+ +GG ++ +K +++YRGKD+ P
Sbjct: 404 WEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNK----DFVILYRGKDFL-PGG 458
Query: 761 LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQL 817
+ K + +++A + +++ +EA L + +L+ AG L SE + S +G D QL
Sbjct: 459 V--KQSVIEQEARVYAQQVKEEEARLMVMDSLKMFAG-LPSEESSVGSFRGYQDFQL 512
>gi|357516865|ref|XP_003628721.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355522743|gb|AET03197.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 387
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 225/381 (59%), Gaps = 31/381 (8%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
AG+T +VD IHEKW E+V+ K + + NMKR ++ILE KTGG+V+WR G+++ LYR
Sbjct: 14 AGITHELVDAIHEKWMVDEVVKFKFDSPLSANMKRANQILESKTGGIVVWRLGSSIVLYR 73
Query: 338 GVSYEVPSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQ----ETDFV 393
G+SY++P V+ ++Y NE ++V + D + + +SV + E +++
Sbjct: 74 GMSYKLPCVESYTKVYNANE---NAVDNSVDVRSGSSVEVSVKVMVGPAESFNRDSAEYL 130
Query: 394 REVKYED------EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGV 447
+++ E+ ++ LLD LGPR+ DW G +PL VDAD LP +VPGY+ PFR+LPYGV
Sbjct: 131 KDMSEEEESMESIKLNLLLDELGPRFKDWTGREPLTVDADQLPVVVPGYKTPFRLLPYGV 190
Query: 448 RSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTT 507
+ L+ KE T ++R+AR HFAL GLA A++KLWE S++AKIA++ GV T+
Sbjct: 191 KPCLSNKEMTVMRRIARRTALHFAL-------GLARAIVKLWETSAVAKIAIRHGVPYTS 243
Query: 508 SERMVEDIKK-LTGGTLLSRNK----DFLVFYRGKNFLSP------DVTEALQERERLAK 556
++RM E++K L L+ + K L+ + G +F VT+ L ER++L
Sbjct: 244 NDRMAEELKVFLINFCLMHQLKHEHIHSLIIFMGVSFYGAMTYCLLSVTKTLTERQKLTV 303
Query: 557 SLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAE 616
QDEEE+AR AS+ L + ++ + AGTL ET A + WG + ++RE+
Sbjct: 304 LQQDEEEKARQNASSITLSNSKSSQMQLLAGTLAETRAATANWGHQPSKQEVGKMIREST 363
Query: 617 VRRHAYLVQKLEKKLARAERK 637
+ R + L++ E KLA K
Sbjct: 364 LDRLSSLIRNHESKLALVSYK 384
>gi|154986385|gb|ABS89146.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 668
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 188/295 (63%), Gaps = 24/295 (8%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++ W G DP+PVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 364 EVKLAEEADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDR 423
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLA LP H+ALGRS LQGLA +MIKLWE+ +AKIALKR T SE + E+
Sbjct: 424 EMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEE 483
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K+LTGGTLLSR+K+ +VFYRGK+FL P V+ A+++R +L S + +
Sbjct: 484 VKELTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAK----------- 532
Query: 575 PSIETIEKSGTAGTLKETLDANSRW---GKRLDDSHKENLVREAEVRRHAYLVQKLEKKL 631
P IE + LK + D + G + ++ E+L + + +E +L
Sbjct: 533 PGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESL---------NTVAKDVETRL 583
Query: 632 ARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLG 686
++A + +AE+ + ++E++ P + E+I+++ER+M RK+GL+MK FLLLG
Sbjct: 584 SQAIAEKAKAEKLIEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQFLLLG 637
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 78/109 (71%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ S AEL LP ELRRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E
Sbjct: 120 SAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCE 179
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI 352
A+NM+R HEILERKTGGLVIWRSG+ + LYRG +Y P ++R+
Sbjct: 180 DVWAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERV 228
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ G+ +G V +H W+ E+VK+ + ++ LE ++
Sbjct: 138 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 197
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP---STLRPKNLLTKRKALARSIELQRQEALLKH 788
GG+++ G +++YRG +Y P + R + L K + +S E +H
Sbjct: 198 GGLVI----WRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESS-DQSNSGDEDETSSQH 252
Query: 789 VATLE-SNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED---------EGDE 838
++ E S+ + + EQ++ G G+ Q + L+ + + E D + + DE
Sbjct: 253 GSSHEKSSENPVVACAEQIHV--GEGNSQTIEYLNQSLSREKDTNHPVSSIKRLVFDADE 310
Query: 839 AYLEMYAGGNDNEDEI 854
L++ A GN NE +
Sbjct: 311 GNLDIRA-GNPNEQHV 325
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFD-Q 719
P +TD E + R+L + LGR G +M W+ E+ KI +K +
Sbjct: 417 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 476
Query: 720 AKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPST 760
++ I ++ +GG L+S DK S +V YRGKD+ P+
Sbjct: 477 SELITEEVKELTGGTLLSRDKES----IVFYRGKDFLPPAV 513
>gi|413918578|gb|AFW58510.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 681
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 188/295 (63%), Gaps = 24/295 (8%)
Query: 395 EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
EVK +E +KLLDGLGPR++ W G DP+PVDAD+LP IVPGY+ PFR+LP GV L +
Sbjct: 377 EVKLAEEADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDR 436
Query: 455 EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 514
E T L+RLA LP H+ALGRS LQGLA +MIKLWE+ +AKIALKR T SE + E+
Sbjct: 437 EMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEE 496
Query: 515 IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 574
+K+LTGGTLLSR+K+ +VFYRGK+FL P V+ A+++R +L S + +
Sbjct: 497 VKELTGGTLLSRDKESIVFYRGKDFLPPAVSLAIEKRRKLGSSTIYKAK----------- 545
Query: 575 PSIETIEKSGTAGTLKETLDANSRW---GKRLDDSHKENLVREAEVRRHAYLVQKLEKKL 631
P IE + LK + D + G + ++ E+L + + +E +L
Sbjct: 546 PGIEESMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESL---------NTVAKDVETRL 596
Query: 632 ARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLG 686
++A + +AE+ + ++E++ P + E+I+++ER+M RK+GL+MK FLLLG
Sbjct: 597 SQAIAEKAKAEKLIEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQFLLLG 650
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 78/109 (71%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ S AEL LP ELRRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E
Sbjct: 133 SAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCE 192
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRI 352
A+NM+R HEILERKTGGLVIWRSG+ + LYRG +Y P ++R+
Sbjct: 193 DVWAMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYPYFHHSERV 241
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 672 FRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAES 731
+ +G+R++ L +G+ G+ +G V +H W+ E+VK+ + ++ LE ++
Sbjct: 151 LQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKT 210
Query: 732 GGVLVSVDKISKGYAMVVYRGKDYQRP---STLRPKNLLTKRKALARSIELQRQEALLKH 788
GG+++ G +++YRG +Y P + R + L K + +S E +H
Sbjct: 211 GGLVI----WRSGSTIILYRGTNYTYPYFHHSERVDSFLDKESS-DQSNSGDEDETSSQH 265
Query: 789 VATLE-SNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSED---------EGDE 838
++ E S+ + + EQ++ G G+ Q + L+ + + E D + + DE
Sbjct: 266 GSSHEKSSENPVVACAEQIHV--GEGNSQTIEYLNQSLSREKDTNHPVSSIKRLVFDADE 323
Query: 839 AYLEMYAGGNDNEDEI 854
L++ A GN NE +
Sbjct: 324 GNLDIRA-GNPNEQHV 338
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFD-Q 719
P +TD E + R+L + LGR G +M W+ E+ KI +K +
Sbjct: 430 PPKLTDREMTILRRLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTD 489
Query: 720 AKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPST 760
++ I ++ +GG L+S DK S +V YRGKD+ P+
Sbjct: 490 SELITEEVKELTGGTLLSRDKES----IVFYRGKDFLPPAV 526
>gi|414870653|tpg|DAA49210.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 467
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 174/313 (55%), Gaps = 19/313 (6%)
Query: 225 PWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAV 284
PW ++E + +++ + AE L EL RLR L R K AG+T V
Sbjct: 141 PWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVTDEV 200
Query: 285 VDIIHEKWKTSE-IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEV 343
V + +W + E + ++I +M R EILE KTGGLV+W G +YRG Y
Sbjct: 201 VKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSKY-- 258
Query: 344 PSVQLNKRIYKRNELPASSVSQATDKQIHKQISMSVNLETASEEQETDFVREVKYEDEVE 403
Q N + S +HK + N ++ +++ + V+ YE EV
Sbjct: 259 ---QQNAKH-----------SHTFLTNVHKDDAFQENDQSICGQKDEEPVKGTLYEREVN 304
Query: 404 KLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLA 463
+LLD LGPR+ DW PLPVDAD+LP VPG++ P+R+ P GVR TLA +E T L++LA
Sbjct: 305 RLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLA 364
Query: 464 RVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI--KKLTGG 521
R+LP HFALGR+ +LQGLA A++KLWEKS IAKIA+K G+Q T +E+M ++ K G
Sbjct: 365 RLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLKGKAYIGL 424
Query: 522 TLLSRNKDFLVFY 534
+L + L+ +
Sbjct: 425 SLTQSTESVLLLF 437
>gi|414870651|tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 496
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 175/326 (53%), Gaps = 16/326 (4%)
Query: 225 PWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAV 284
PW ++E + +++ + AE L EL RLR L R K AG+T V
Sbjct: 141 PWAAARDEGLKVALRREKKPREPTRAETELETHELHRLRRLARGIGRWARAKKAGVTDEV 200
Query: 285 VDIIHEKWKTSE-IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE- 342
V + +W + E + ++I +M R EILE KTGGLV+W G +YRG Y+
Sbjct: 201 VKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSKYQQ 260
Query: 343 -----------VPSVQLNKRIYKRNELPASSVSQA-TDKQIHKQISMSVNLETASEEQET 390
V L K L S+ + + N ++ +++
Sbjct: 261 NAKHSHTFLTNVHKGYLVKHNVHTTLLKYGSIGPVLINNYGEADDAFQENDQSICGQKDE 320
Query: 391 DFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRST 450
+ V+ YE EV +LLD LGPR+ DW PLPVDAD+LP VPG++ P+R+ P GVR T
Sbjct: 321 EPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPT 380
Query: 451 LARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSER 510
LA +E T L++LAR+LP HFALGR+ +LQGLA A++KLWEKS IAKIA+K G+Q T +E+
Sbjct: 381 LADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQ 440
Query: 511 MVEDI--KKLTGGTLLSRNKDFLVFY 534
M ++ K G +L + L+ +
Sbjct: 441 MAWNLKGKAYIGLSLTQSTESVLLLF 466
>gi|326521980|dbj|BAK04118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 128/179 (71%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
QK + K+ RA + LSK+E S+ A D E IT EER +FR++GL+MKA+L
Sbjct: 8 QKTRTQAFHCSSKIHRAGKLLSKIEASMVLANPSDDREMITAEERSVFRRIGLKMKAYLP 67
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVFDG +ENMHLHWK+RE+VK+I K KT ++ A LE ESGG+LV+++++ KG
Sbjct: 68 VGIRGVFDGVIENMHLHWKHREVVKLITKQKTLAFVEETARLLEYESGGILVAIERVPKG 127
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
+A++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR EAL +H+ LE N +++ ++
Sbjct: 128 HALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLEINMKQMKRDL 186
>gi|167998334|ref|XP_001751873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696971|gb|EDQ83308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 129/179 (72%), Gaps = 6/179 (3%)
Query: 627 LEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLG 686
LE++L+ RK E+ L+K++ +K A+ E I+DEER+MF KLGLRM+A LL+G
Sbjct: 110 LEERLSLVARKKKYVEKELAKLDGQMKLADAPPAKEQISDEERYMFMKLGLRMRARLLMG 169
Query: 687 -----RRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 741
RRGVFDG VENMHLHWK+RELVK+I K F+ A++ A LE ESGGVLV +
Sbjct: 170 KLSSGRRGVFDGVVENMHLHWKHRELVKVIFKGPIFE-AEQTAKILEMESGGVLVGIVTT 228
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLR 800
+KG A++ YRGK+YQRPS LRP++LL+KR+A RS+E+QR+ +L +H+ LE G+L+
Sbjct: 229 TKGQAIIFYRGKNYQRPSELRPRHLLSKRQAYERSLEMQRKRSLEQHMLKLEKEIGKLQ 287
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 53/294 (18%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGG----LVIWRSGTAVS 334
G+ VV+ +H WK E+V++ +G P ++ +ILE ++GG +V G A+
Sbjct: 177 GVFDGVVENMHLHWKHRELVKVIFKG-PIFEAEQTAKILEMESGGVLVGIVTTTKGQAII 235
Query: 335 LYRGVSYEVPSVQLNKR--IYKRNELPAS-------SVSQ---ATDKQIHK-QISM---- 377
YRG +Y+ PS +L R + KR S S+ Q +K+I K Q+ +
Sbjct: 236 FYRGKNYQRPS-ELRPRHLLSKRQAYERSLEMQRKRSLEQHMLKLEKEIGKLQVGLYETG 294
Query: 378 ---------SVNLETASEEQET---DFVREVKYEDEV--EKLLDGLGPRYTDWPGCDPLP 423
NL SE T DF E DE E L D + R+ W P P
Sbjct: 295 EGNSGLEMEEKNLLALSEPLGTVLEDFDDEEFRSDENYNENLADDI-ERF-GWKREKPNP 352
Query: 424 VDADMLPGIVPGYQPPFRVLPYGVRSTL-ARKEATNLQRLARVLPPHFALGRSRQLQGLA 482
G+V P F+ P ++ + R+EA L + P H +G+S + GLA
Sbjct: 353 ------RGVV--LDPIFKAQPLTIKERIRLRQEA-----LKQSDPMHINIGKSNMVAGLA 399
Query: 483 VAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRG 536
A+ ++K A + +K + T E +++ +++ TG L+SR + L+ YRG
Sbjct: 400 KAIRLYFQKQPFAIVGVKGRAKDTPVEEIIQQLEEATGAVLVSREPNKLILYRG 453
>gi|9837552|gb|AAG00596.1|AF290415_1 CRS1 [Zea mays]
Length = 267
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 130/208 (62%), Gaps = 16/208 (7%)
Query: 309 NMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATD 368
+M R EILE KTGGLV+W G +YRG Y+ + S
Sbjct: 26 SMDRAREILEIKTGGLVVWTKGDMHFVYRGSKYQ----------------QNAKHSHTFL 69
Query: 369 KQIHKQISMSVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADM 428
+HK + N ++ +++ + V+ YE EV +LLD LGPR+ DW PLPVDAD+
Sbjct: 70 TNVHKDDAFQENDQSICGQKDEEPVKGTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADL 129
Query: 429 LPGIVPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKL 488
LP VPG++ P+R+ P GVR TLA +E T L++LAR+LP HFALGR+ +LQGLA A++KL
Sbjct: 130 LPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKL 189
Query: 489 WEKSSIAKIALKRGVQLTTSERMVEDIK 516
WEKS IAKIA+K G+Q T +E+M ++K
Sbjct: 190 WEKSLIAKIAVKIGIQNTNNEQMAWNLK 217
>gi|413946392|gb|AFW79041.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 197
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 134/195 (68%), Gaps = 16/195 (8%)
Query: 664 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKI 723
ITDEE+ +FR++GLR+KA+L LG RGVFDG +ENMHLHWK+RE+VK+I K KT ++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 724 ALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQE 783
A L ESGG+LV+++++ KGYA++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR E
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 784 ALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEM 843
AL +H+ LESN I+QM G D + D+ DS+ DSE+E D A +
Sbjct: 122 ALSQHIDQLESN-------IKQMKLDLGIEDYEEQDE-DSS------DSENEYDNAVTSV 167
Query: 844 YAGGNDNEDEIDNST 858
++++D+ D S
Sbjct: 168 --SYDEDQDDFDESA 180
>gi|297612106|ref|NP_001068192.2| Os11g0592400 [Oryza sativa Japonica Group]
gi|255680227|dbj|BAF28555.2| Os11g0592400, partial [Oryza sativa Japonica Group]
Length = 108
Score = 175 bits (444), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 94/103 (91%)
Query: 684 LLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISK 743
L GRRGVFDGT+ENMHLHWKYRELVKI+VK K+F KKIAL+LEAESGG+LVSVDK+SK
Sbjct: 6 LSGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSK 65
Query: 744 GYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
GYA+VV+RGKDY RPS LRP+NLL+KRKALARSIE+QR+E L
Sbjct: 66 GYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREVLF 108
>gi|413946391|gb|AFW79040.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 266
Score = 173 bits (439), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/140 (55%), Positives = 111/140 (79%)
Query: 664 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKI 723
ITDEE+ +FR++GLR+KA+L LG RGVFDG +ENMHLHWK+RE+VK+I K KT ++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 724 ALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQE 783
A L ESGG+LV+++++ KGYA++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR E
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 784 ALLKHVATLESNAGRLRSEI 803
AL +H+ LESN +++ ++
Sbjct: 122 ALSQHIDQLESNIKQMKLDL 141
Score = 40.0 bits (92), Expect = 6.3, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
+ + E R + + K+ + G+ V++ +H WK E+V+L + ++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 314 HEILERKTGGLVIW----RSGTAVSLYRGVSYEVPSVQLNKRIYKRNEL-PASSVSQATD 368
+L ++GG+++ G A+ YRG +Y P +N R RN L A ++ +A
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRP---INIR--PRNLLTKAKALKRAVA 116
Query: 369 KQIHKQISMSVN-LETASEEQETDFVREVK 397
Q H+ +S ++ LE+ ++ + D +R ++
Sbjct: 117 MQRHEALSQHIDQLESNIKQMKLDLLRTMR 146
>gi|413946390|gb|AFW79039.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 132
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 98/123 (79%)
Query: 664 ITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKI 723
ITDEE+ +FR++GLR+KA+L LG RGVFDG +ENMHLHWK+RE+VK+I K KT ++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 724 ALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQE 783
A L ESGG+LV+++++ KGYA++ YRGK+Y+RP +RP+NLLTK KAL R++ +QR E
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 784 ALL 786
L
Sbjct: 122 VCL 124
>gi|125547308|gb|EAY93130.1| hypothetical protein OsI_14936 [Oryza sativa Indica Group]
Length = 103
Score = 135 bits (340), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/81 (71%), Positives = 69/81 (85%)
Query: 393 VREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 452
V E+KYEDE++KL D LGPRY DWP DP P+DAD+LP VPGY+PPFRVLPYGVR +L+
Sbjct: 16 VPEIKYEDEIDKLSDELGPRYDDWPRPDPSPIDADLLPATVPGYKPPFRVLPYGVRPSLS 75
Query: 453 RKEATNLQRLARVLPPHFALG 473
R++ TNL+RLAR LPPHFALG
Sbjct: 76 RRDTTNLRRLARGLPPHFALG 96
>gi|147838476|emb|CAN69859.1| hypothetical protein VITISV_037991 [Vitis vinifera]
Length = 371
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 80/101 (79%)
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
GRRGVFDG +E +H HWK+RE+VK+I ++F Q A LE+ESGGVLVS+DK+ +G
Sbjct: 118 FGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEG 177
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEAL 785
+A+++YRGK+Y+RP L PKNLLTKR+AL RS+E+QR +L
Sbjct: 178 HAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSL 218
>gi|115459160|ref|NP_001053180.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|21740788|emb|CAD41533.1| OSJNBb0091E11.2 [Oryza sativa Japonica Group]
gi|38346227|emb|CAE02049.2| OJ990528_30.7 [Oryza sativa Japonica Group]
gi|90265163|emb|CAH67731.1| H0522A01.2 [Oryza sativa Indica Group]
gi|113564751|dbj|BAF15094.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|116310744|emb|CAH67539.1| H0425E08.7 [Oryza sativa Indica Group]
gi|125548841|gb|EAY94663.1| hypothetical protein OsI_16441 [Oryza sativa Indica Group]
Length = 479
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KLAR + + L A AL+K+E P+E DPE +T EE F F K+G + K ++ +GRRG
Sbjct: 148 KLARNKEERLVA--ALTKIEPD-DPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRG 204
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
++ G + NMHLHWK + +++IVK T D+ K+IA L SGG+++ I +G +++
Sbjct: 205 IYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLD---IQEGNTIIM 261
Query: 750 YRGKDYQRPS--TLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
YRGK+Y +P + PK L ++KAL +S +R AL +++ LE L ++++
Sbjct: 262 YRGKNYAQPPPEIMSPKVTLPRKKALDKSKYRERLRALRRYIPRLEQELVDLHAQMKLAR 321
Query: 808 SVKG 811
KG
Sbjct: 322 DYKG 325
>gi|224132018|ref|XP_002321235.1| predicted protein [Populus trichocarpa]
gi|222862008|gb|EEE99550.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A+RK R +AL K+E + +E DPE +T EE F F K+GL+ K ++
Sbjct: 92 EKILYKLRKAQRKEERFVQALKKIEPK-ESSEATHDPEILTPEEHFFFLKMGLKCKNYVP 150
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +K++VK T ++ K+IA L +GG+++ I +
Sbjct: 151 VGRRGIYQGVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFTGGIVLD---IHEE 207
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L+++KAL +S AL +++ L+ + L +
Sbjct: 208 NTIIMYRGKNYSQPPTEIMSPRVTLSRKKALDKSKCRDGLRALRRYIPRLQQDLELLHAR 267
Query: 803 IEQMNSVKGTGDEQLYDKL--DSAYATEDDDSEDEGDEAYLEMYAG-GNDNEDEID---- 855
+ G + K +S E D +DEG E + G +D+ED D
Sbjct: 268 AGGKTDIDGAESRSISSKQLENSEKLKEIIDRQDEGSEDGPDTDLGIASDSEDLSDIFET 327
Query: 856 NSTHNLEMESDFPYHAQDQESETELMDSESEAYTVH 891
+S + E S P + ++ E + D E E + H
Sbjct: 328 DSDADTEETSKRPLYLEEFEKFSVEADGEPEDFEEH 363
>gi|238007578|gb|ACR34824.1| unknown [Zea mays]
gi|414586597|tpg|DAA37168.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 342
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL A +K R AL K+E P+E DPE +T EE F F K+G + K ++
Sbjct: 5 EKILYKLKLARKKEERLVVALKKIEPE-DPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVP 63
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++IVK T ++ K+IA+ L SGG+++ I G
Sbjct: 64 VGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLD---IQDG 120
Query: 745 YAMVVYRGKDYQR--PSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y + P + PK L+++KAL +S +++ AL +++ LE L ++
Sbjct: 121 NTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQ 180
Query: 803 I 803
+
Sbjct: 181 M 181
>gi|212723506|ref|NP_001132081.1| uncharacterized protein LOC100193495 [Zea mays]
gi|194693368|gb|ACF80768.1| unknown [Zea mays]
gi|414586598|tpg|DAA37169.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 485
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL A +K R AL K+E P+E DPE +T EE F F K+G + K ++
Sbjct: 148 EKILYKLKLARKKEERLVVALKKIEPE-DPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVP 206
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++IVK T ++ K+IA+ L SGG+++ I G
Sbjct: 207 VGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLD---IQDG 263
Query: 745 YAMVVYRGKDYQRPS--TLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P + PK L+++KAL +S +++ AL +++ LE L ++
Sbjct: 264 NTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQ 323
Query: 803 IE 804
++
Sbjct: 324 MK 325
>gi|357167884|ref|XP_003581379.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 485
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 110/182 (60%), Gaps = 6/182 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL A +K R AL K+E + P+E DPE +T EE F F K+G + K ++
Sbjct: 148 EKILYKLKLARKKEERLLAALKKIEPN-DPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVP 206
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++IVK T ++ K+IA L SGG+++S I +G
Sbjct: 207 VGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIASELAILSGGIVLS---IQEG 263
Query: 745 YAMVVYRGKDYQRPS--TLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P + PK L ++KAL +S R AL +++ LE L ++
Sbjct: 264 NTIIMYRGKNYAQPPPEIMSPKIALPRKKALDKSKYRDRLRALRRYIPRLEQELEDLHAQ 323
Query: 803 IE 804
++
Sbjct: 324 MK 325
>gi|242073570|ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
gi|241937904|gb|EES11049.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
Length = 484
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%), Gaps = 6/189 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL A +K R AL K+E P+E DPE +T EE F F K+G + K ++
Sbjct: 147 EKILYKLKLARKKEERLVAALKKIEPE-DPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVP 205
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++IVK T ++ K+IA L SGG+++ I G
Sbjct: 206 VGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIATELARLSGGIVLD---IQDG 262
Query: 745 YAMVVYRGKDYQRPS--TLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P + PK L+++KAL +S +++ AL +++ LE L ++
Sbjct: 263 NTIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQ 322
Query: 803 IEQMNSVKG 811
++ KG
Sbjct: 323 MKLAGEHKG 331
>gi|225448146|ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Vitis vinifera]
Length = 401
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 133/232 (57%), Gaps = 7/232 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A RK R AL+K+E + +E DPE +T EE F F K+GL+ K ++
Sbjct: 75 EKILYKLRKARRKEERLAEALTKIEPK-ESSETTHDPEILTPEEHFFFLKMGLKCKNYVP 133
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + ++++VK + ++ K+IA+ L +GG+++ I +
Sbjct: 134 IGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLD---IHEE 190
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L+++KAL +S A+ K++ LE + L+++
Sbjct: 191 NTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQAQ 250
Query: 803 IEQMNSVKGTGDEQLYD-KLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDE 853
+ K E + +DS + + + E + E+ AG N++ +E
Sbjct: 251 AKMQAENKTEAVEDFQNANIDSINSQGISNLQPENSDKLRELLAGNNESSEE 302
Score = 39.7 bits (91), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS-RN 527
+ +GR QG+ + M W+K ++ +K E VE + +LTGG +L
Sbjct: 131 YVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVE-LARLTGGIVLDIHE 189
Query: 528 KDFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
++ ++ YRGKN+ P TE + R L+ K+L + + LRA +P +E
Sbjct: 190 ENTIIMYRGKNYSQPP-TEIMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLE 241
>gi|297739537|emb|CBI29719.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 133/232 (57%), Gaps = 7/232 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A RK R AL+K+E + +E DPE +T EE F F K+GL+ K ++
Sbjct: 5 EKILYKLRKARRKEERLAEALTKIEPK-ESSETTHDPEILTPEEHFFFLKMGLKCKNYVP 63
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + ++++VK + ++ K+IA+ L +GG+++ I +
Sbjct: 64 IGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLD---IHEE 120
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L+++KAL +S A+ K++ LE + L+++
Sbjct: 121 NTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQAQ 180
Query: 803 IEQMNSVKGTGDEQLYD-KLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDE 853
+ K E + +DS + + + E + E+ AG N++ +E
Sbjct: 181 AKMQAENKTEAVEDFQNANIDSINSQGISNLQPENSDKLRELLAGNNESSEE 232
>gi|9279724|dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
Length = 1115
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A +K R + K+E S + AE DPE +T EE F + K+GL+ K ++
Sbjct: 810 EKILNKLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 868
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++++K T D+ K+IA+ L +GG+++ V +G
Sbjct: 869 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EG 925
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L ++KAL +S A+ K++ LE L+++
Sbjct: 926 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 985
Query: 803 IE 804
E
Sbjct: 986 AE 987
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
+ +GR QG+ + M W+K ++ +K E VE + +LTGG +L ++
Sbjct: 866 YVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVE-LARLTGGIVLDVHE 924
Query: 529 -DFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
+ ++ YRGKN++ P TE + R L K+L + + LRA +P +E
Sbjct: 925 GNTIIMYRGKNYVQPP-TEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLE 976
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
E+ PE L+ + + K+ + G+ Q V+ +H WK + +++ I+ +
Sbjct: 846 EILTPEEHFYYLK-MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEV 904
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQL 348
K + L R TGG+V+ G + +YRG +Y P ++
Sbjct: 905 KEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEI 943
>gi|356501797|ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 382
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A +K R AL K+E + + +E DPE +T EE F F K+GL+ K ++
Sbjct: 80 EKILYKLLKARKKEERLCEALKKIEPA-ESSETTHDPEILTPEEHFFFLKMGLKSKNYVP 138
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +K++VK + ++ K+IA L SGG+++ I +
Sbjct: 139 VGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIATELARLSGGIVLD---IHED 195
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L+++KAL +S A+ +H+ LE LR++
Sbjct: 196 NTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRHIPRLEQELEILRAQ 255
Query: 803 I 803
Sbjct: 256 F 256
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S T E+ PE L+ + ++K+ + G+ Q V+ +H WK + +++ ++
Sbjct: 109 SETTHDPEILTPEEHFFFLK-MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVK 167
Query: 304 GAPALNMKRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASS 362
A +K + L R +GG+V+ + +YRG +Y P ++ P S
Sbjct: 168 TFSAEEVKEIATELARLSGGIVLDIHEDNTIIMYRGKNYSQPPTEIMS--------PRVS 219
Query: 363 VS--QATDKQIHKQISMSVNLETASEEQETDFVR 394
+S +A DK ++ +V EQE + +R
Sbjct: 220 LSRKKALDKSKYRDALRAVRRHIPRLEQELEILR 253
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
+ +GR QG+ + M W+K K+ +K E + ++ +L+GG +L ++
Sbjct: 136 YVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKE-IATELARLSGGIVLDIHE 194
Query: 529 D-FLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
D ++ YRGKN+ P TE + R L+ K+L + + LRA +P +E
Sbjct: 195 DNTIIMYRGKNYSQPP-TEIMSPRVSLSRKKALDKSKYRDALRAVRRHIPRLE 246
>gi|297831446|ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329445|gb|EFH59864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1055
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 110/182 (60%), Gaps = 6/182 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A +K R + K+E S + AE DPE +T EE F + K+GL+ K ++
Sbjct: 753 EKILNKLTKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 811
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++++K T D+ +IA+ L +GG+++ V +G
Sbjct: 812 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVNEIAVELARLTGGIVLDVH---EG 868
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L ++KAL +S A+ K++ LE L+++
Sbjct: 869 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 928
Query: 803 IE 804
E
Sbjct: 929 AE 930
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
+ +GR QG+ + M W+K ++ +K +E VE + +LTGG +L ++
Sbjct: 809 YVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVNEIAVE-LARLTGGIVLDVHE 867
Query: 529 -DFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
+ ++ YRGKN++ P TE + R L K+L + + LRA +P +E
Sbjct: 868 GNTIIMYRGKNYVQPP-TEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLE 919
>gi|79417439|ref|NP_189171.2| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName: Full=Uncharacterized CRM domain-containing protein
At3g25440, chloroplastic; Flags: Precursor
gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis thaliana]
gi|332643490|gb|AEE77011.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A +K R + K+E S + AE DPE +T EE F + K+GL+ K ++
Sbjct: 139 EKILNKLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 197
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++++K T D+ K+IA+ L +GG+++ V +G
Sbjct: 198 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDV---HEG 254
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L ++KAL +S A+ K++ LE L+++
Sbjct: 255 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 314
Query: 803 IE 804
E
Sbjct: 315 AE 316
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
+ +GR QG+ + M W+K ++ +K E VE + +LTGG +L ++
Sbjct: 195 YVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVE-LARLTGGIVLDVHE 253
Query: 529 -DFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
+ ++ YRGKN++ P TE + R L K+L + + LRA +P +E
Sbjct: 254 GNTIIMYRGKNYVQPP-TEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLE 305
>gi|145332683|ref|NP_001078207.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|332643491|gb|AEE77012.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 380
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ KL +A +K R + K+E S + AE DPE +T EE F + K+GL+ K ++
Sbjct: 75 EKILNKLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 133
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + +++++K T D+ K+IA+ L +GG+++ V +G
Sbjct: 134 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDV---HEG 190
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L ++KAL +S A+ K++ LE L+++
Sbjct: 191 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 250
Query: 803 IE 804
E
Sbjct: 251 AE 252
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
+ +GR QG+ + M W+K ++ +K E VE + +LTGG +L ++
Sbjct: 131 YVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVE-LARLTGGIVLDVHE 189
Query: 529 -DFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
+ ++ YRGKN++ P TE + R L K+L + + LRA +P +E
Sbjct: 190 GNTIIMYRGKNYVQPP-TEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLE 241
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
E+ PE L+ + + K+ + G+ Q V+ +H WK + +++ I+ +
Sbjct: 111 EILTPEEHFYYLK-MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEV 169
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQL 348
K + L R TGG+V+ G + +YRG +Y P ++
Sbjct: 170 KEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEI 208
>gi|255572670|ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
gi|223533361|gb|EEF35112.1| conserved hypothetical protein [Ricinus communis]
Length = 458
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 118/199 (59%), Gaps = 11/199 (5%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+KL KL +A++K R +AL K+E + +E DPE +T EE F F K+GL+ K ++
Sbjct: 133 EKLLYKLKKAQKKEERYVQALKKIE-PVDSSETTHDPEILTPEEHFFFLKMGLKCKNYVP 191
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + V+++VK + ++ K+IA L +GG+++ I +
Sbjct: 192 VGRRGIYQGVILNMHLHWKKHQTVQVVVKTFSPEEVKEIAAELARLTGGIVLD---IHEE 248
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L+++KAL +S A+ ++ LE + L+
Sbjct: 249 NTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRNYIPRLEQDLELLK-- 306
Query: 803 IEQMNSVK---GTGDEQLY 818
++ M + + +E LY
Sbjct: 307 VQSMGKAECGSASAEETLY 325
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS-RN 527
+ +GR QG+ + M W+K ++ +K E + ++ +LTGG +L
Sbjct: 189 YVPVGRRGIYQGVILNMHLHWKKHQTVQVVVKTFSPEEVKE-IAAELARLTGGIVLDIHE 247
Query: 528 KDFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
++ ++ YRGKN+ P TE + R L+ K+L + + LRA +P +E
Sbjct: 248 ENTIIMYRGKNYSQPP-TEIMSPRITLSRKKALDKSKYRDGLRAVRNYIPRLE 299
>gi|356498434|ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like, partial [Glycine max]
Length = 383
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 107/176 (60%), Gaps = 6/176 (3%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL +A +K R AL K+E + + +E DPE +T EE F F K+GL+ K ++ +GRRG
Sbjct: 65 KLLKARKKEERLCEALKKIEPA-ESSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 123
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
++ G + NMHLHWK + +K++VK + ++ K+IA L SGG+++ I + +++
Sbjct: 124 IYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLSGGIVLD---IHEDNTIIM 180
Query: 750 YRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEI 803
YRGK+Y +P T + P+ L+++KAL +S A+ +++ LE LR++
Sbjct: 181 YRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQF 236
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSRNK 528
+ +GR QG+ + M W+K K+ +K E + ++ +L+GG +L ++
Sbjct: 116 YVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKE-IAAELARLSGGIVLDIHE 174
Query: 529 D-FLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIETIEKSGT 585
D ++ YRGKN+ P TE + R L+ K+L + + LRA +P +E E
Sbjct: 175 DNTIIMYRGKNYSQPP-TEIMSPRVSLSRKKALDKSKYRDALRAVRRYIPRLEQ-ELEIL 232
Query: 586 AGTLKETLDANSRWGKRLDDSHKENL 611
K + ++N+ + + +S +E++
Sbjct: 233 RAQFKSSAESNTDAAEAIQNSGRESI 258
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S T E+ PE L+ + ++K+ + G+ Q V+ +H WK + +++ ++
Sbjct: 89 SETTHDPEILTPEEHFFFLK-MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVK 147
Query: 304 GAPALNMKRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQL 348
A +K + L R +GG+V+ + +YRG +Y P ++
Sbjct: 148 TFSAEEVKEIAAELARLSGGIVLDIHEDNTIIMYRGKNYSQPPTEI 193
>gi|449458069|ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
gi|449516505|ref|XP_004165287.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 500
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 116/200 (58%), Gaps = 6/200 (3%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
+K+ K+ +A +K R AL K+E + ++ DPE +T EE F F K+G++ K ++
Sbjct: 173 EKILFKMNKARKKEKRLVEALEKIEPA-DSSDTTHDPEILTPEEHFYFLKMGIKGKNYVP 231
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+GRRG++ G + NMHLHWK + VK++VK + ++ K+IA L +GG+++ I +
Sbjct: 232 VGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEVKEIAAELARLTGGLVLD---IHEE 288
Query: 745 YAMVVYRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802
+++YRGK+Y +P T + P+ L+++KAL +S A+ KH+ LE L+S+
Sbjct: 289 DTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDGLRAVRKHIPKLEQELRFLQSQ 348
Query: 803 IEQMNSVKGTGDEQLYDKLD 822
+ G E + + +D
Sbjct: 349 AKLNCKSNGESVEHMQETVD 368
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS-RN 527
+ +GR QG+ + M W+K K+ +K E + ++ +LTGG +L
Sbjct: 229 YVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEVKE-IAAELARLTGGLVLDIHE 287
Query: 528 KDFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
+D ++ YRGKN+ P TE + R L+ K+L + + LRA +P +E
Sbjct: 288 EDTIIMYRGKNYSQPP-TEIMSPRVSLSRKKALDKSKYRDGLRAVRKHIPKLE 339
>gi|357439975|ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479313|gb|AES60516.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 443
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 27/255 (10%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL +A +K R AL K+E + + +E DPE +T EE F F K+GL+ K ++ +GRRG
Sbjct: 125 KLLKARKKEERLREALKKIEPT-ESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 183
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
++ G + NMHLHWK + ++++VK + ++ K+IA L +GG+++ I + +++
Sbjct: 184 IYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLG---IHEEDTIIM 240
Query: 750 YRGKDYQRPST--LRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
YRGK+Y +P T + P+ L ++KAL +S A+ +++ LE LR++ +
Sbjct: 241 YRGKNYSQPPTEIMSPRVTLPRKKALDKSKYRDGLRAVRRYIPKLEQELEILRAQFQSTA 300
Query: 808 SVKGTGDE--QLYD---------------KLDSAYATEDDDSEDEGDEAY----LEMYAG 846
E Q+ D KLD A +D++ DEA+ L+ Y+
Sbjct: 301 ESNTEAAEGIQISDKVSVEPSSVSNLQLEKLDKVGAMFNDNNSCSEDEAHMDSDLDSYSD 360
Query: 847 GNDNEDEIDNSTHNL 861
+ E D+ T +L
Sbjct: 361 KLSDIFETDSDTEDL 375
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 469 HFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLTGGTLLS-RN 527
+ +GR QG+ + M W+K ++ +K E + ++ +LTGG +L
Sbjct: 176 YVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKE-IATELARLTGGIVLGIHE 234
Query: 528 KDFLVFYRGKNFLSPDVTEALQERERLA--KSLQDEEEQARLRASAFVLPSIE 578
+D ++ YRGKN+ P TE + R L K+L + + LRA +P +E
Sbjct: 235 EDTIIMYRGKNYSQPP-TEIMSPRVTLPRKKALDKSKYRDGLRAVRRYIPKLE 286
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
E+ PE L+ + ++K+ + G+ Q V+ +H WK + +++ ++ A +
Sbjct: 156 EILTPEEHFFFLK-MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEV 214
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDK 369
K + L R TGG+V+ + +YRG +Y P ++ + R LP +A DK
Sbjct: 215 KEIATELARLTGGIVLGIHEEDTIIMYRGKNYSQPPTEI---MSPRVTLPR---KKALDK 268
Query: 370 QIHKQISMSVNLETASEEQETDFVR 394
++ +V EQE + +R
Sbjct: 269 SKYRDGLRAVRRYIPKLEQELEILR 293
>gi|125590852|gb|EAZ31202.1| hypothetical protein OsJ_15301 [Oryza sativa Japonica Group]
Length = 484
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 17/210 (8%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KLAR + + L A AL+K+E P+E DPE +T EE F F K+G + K ++ +GRRG
Sbjct: 148 KLARNKEERLVA--ALTKIEPD-DPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRG 204
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
++ G + NMHLHWK + +++IVK T D+ K+IA L SGG+++ I +G +++
Sbjct: 205 IYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLD---IQEGNTIIM 261
Query: 750 YRGKDYQRPS--TLRPKNLLTKR--KALARSIELQRQE---ALLKHVATLESNAGRLRSE 802
YRGK+Y +P + PK L ++ K L I + AL +++ LE L ++
Sbjct: 262 YRGKNYAQPPPEIMSPKVTLPRKKWKVLQHWINQNTENASRALRRYIPRLEQELVDLHAQ 321
Query: 803 IEQMNSVKGTGDEQ----LYDKLDSAYATE 828
++ KG + + D ++S A E
Sbjct: 322 MKLARDYKGQNAAEDITCISDSVNSTSAKE 351
>gi|326507158|dbj|BAJ95656.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 115
Score = 105 bits (263), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 57/76 (75%)
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
YE EV +LLD LGPR+ DW PLPVDAD+LP +VPG++ PFR P GVR TLA +E T
Sbjct: 20 YEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELT 79
Query: 458 NLQRLARVLPPHFALG 473
L++LAR LP HFALG
Sbjct: 80 YLRKLARPLPTHFALG 95
>gi|357439925|ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479288|gb|AES60491.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 472
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL +A +K R AL K+E + + +E DPE +T EE F F K+GL+ K ++ +GRRG
Sbjct: 125 KLLKARKKEERLREALKKIEPT-ESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRG 183
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
++ G + NMHLHWK + ++++VK + ++ K+IA L +GG+++ I + +++
Sbjct: 184 IYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLG---IHEEDTIIM 240
Query: 750 YRGKDYQRPST--LRPKNLLTKRKAL 773
YRGK+Y +P T + P+ L ++K L
Sbjct: 241 YRGKNYSQPPTEIMSPRVTLPRKKVL 266
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
E+ PE L+ + ++K+ + G+ Q V+ +H WK + +++ ++ A +
Sbjct: 156 EILTPEEHFFFLK-MGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEV 214
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASSVSQATDK 369
K + L R TGG+V+ + +YRG +Y P ++ + R LP V
Sbjct: 215 KEIATELARLTGGIVLGIHEEDTIIMYRGKNYSQPPTEI---MSPRVTLPRKKVLHVPKD 271
Query: 370 QIHKQI 375
+H I
Sbjct: 272 CLHHTI 277
>gi|326494498|dbj|BAJ90518.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326502328|dbj|BAJ95227.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 95
Score = 104 bits (260), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 57/76 (75%)
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
YE EV +LLD LGPR+ DW PLPVDAD+LP +VPG++ PFR P GVR TLA +E T
Sbjct: 20 YEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELT 79
Query: 458 NLQRLARVLPPHFALG 473
L++LAR LP HFALG
Sbjct: 80 YLRKLARPLPTHFALG 95
>gi|356560779|ref|XP_003548665.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized CRM
domain-containing protein At3g25440, chloroplastic-like
[Glycine max]
Length = 273
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 145/255 (56%), Gaps = 24/255 (9%)
Query: 621 AYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMK 680
Y+VQ++ L +A++K R AL K+E + K +E DPE + EE F F K+GL+ K
Sbjct: 16 TYVVQRI-PSLTKAQKKKKRLCEALKKIEPA-KSSETTHDPEILXPEEHFFFLKMGLKRK 73
Query: 681 AFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA--KKIALALEAESGGVLVSV 738
+ +GRRG++ G + +MHLH K + +K+ VKTF A K+IA L SGG+++
Sbjct: 74 NNVPVGRRGIYQGVILSMHLHXKKHQTLKV---VKTFSAAEVKEIAAELARLSGGIVLD- 129
Query: 739 DKISKGYAMVVYRGKDYQRPST--LRPKNLLTKRKALARS-IELQRQEALLKHVATLESN 795
I + +++YRGK+Y +P T + P+ L+++KAL +S L+++ A+L+ A +S+
Sbjct: 130 --IHEDNTIIMYRGKNYSQPPTQIMSPRVSLSRKKALDKSKYRLEQELAILR--AQFKSS 185
Query: 796 AGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYL-EMYAGGNDNEDEI 854
A S+ E +++ +G E ++S D +SE + D L +++ +D E+ +
Sbjct: 186 A---ESKTEAAEAIQNSGRES----IESGKDETDMNSELDSDSDKLSDIFETDSDTENFV 238
Query: 855 DNSTH-NLEMESDFP 868
+ NL+ +FP
Sbjct: 239 NEEKPLNLDDFDNFP 253
>gi|242076260|ref|XP_002448066.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
gi|241939249|gb|EES12394.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
Length = 338
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 19/243 (7%)
Query: 602 RLDDSHKENLVREAEVRRHAYLVQKLEKKL------ARAERKLLRAERALSKVEESLK-- 653
R K+ + R+A+V + + K +KK+ R KL +A+R + E L+
Sbjct: 97 RQQSPPKKKMSRKAKVNQLKWYRLKAKKKMKSPNPEVRIRYKLEKAKRKEEWLIEKLRKY 156
Query: 654 ----PAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 709
E DPE +T+EE+F ++ G + K ++ +GRRGVF G V NMHLHWK E VK
Sbjct: 157 DVPRTPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKNHETVK 216
Query: 710 IIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTK 769
++ K Q + A L S G ++ I ++ YRGK+Y +P + P + L+K
Sbjct: 217 VVCKPCRPGQVYEYAEELTRLSKGTIID---IKPNNTIMFYRGKNYVQPQVMSPPDTLSK 273
Query: 770 RKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATED 829
+KAL + LQ E + + LE + + + +G E K+ + ++T D
Sbjct: 274 QKALEKYRYLQSLEHTSQFIEKLEKELEDYKKHVALFKNREGVASE----KISNEHSTVD 329
Query: 830 DDS 832
D +
Sbjct: 330 DPA 332
>gi|413946393|gb|AFW79042.1| hypothetical protein ZEAMMB73_840751, partial [Zea mays]
Length = 140
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
Query: 511 MVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRAS 570
M E+IK LTGGTLL RNK ++V YRGK+FL V L ERE L K + + EEQ R
Sbjct: 1 MAEEIKNLTGGTLLLRNKFYIVIYRGKDFLPTSVAAVLAEREELTKDIYNMEEQR--RRV 58
Query: 571 AFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKK 630
PS + ++ AGTL E +A +RWG+ + +E + + L +KLE K
Sbjct: 59 LITQPSDDGLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHK 118
Query: 631 LARAERKLLRAERALSKVEESL 652
L+ A+ K+ RAER LSK+E SL
Sbjct: 119 LSIAQAKIHRAERLLSKIEASL 140
>gi|356511313|ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 632 ARAERKLLRAERALSKVEESL------KPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
R KL +A+R + + E L KP DPE +T+EER ++ G R K ++ +
Sbjct: 87 VRIRYKLEKAKRKETWLIEKLRKFDVPKPPPETYDPEILTEEERHYLKRTGERKKHYVPV 146
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G V NMHLHWK E VK+I K Q + A L S G+++ I
Sbjct: 147 GRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNN 203
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATL 792
++ YRGK+Y +P + P N L+K KAL E R E L+H +
Sbjct: 204 TIIFYRGKNYVKPEVMSPPNTLSKAKAL----EKYRYEQSLEHTSQF 246
>gi|357478871|ref|XP_003609721.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355510776|gb|AES91918.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 399
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K + P E DPE +T+EER ++ G + K ++ +
Sbjct: 215 RIRYKLEKAKRKETWLIEKLRKFDVPKLPTE-TFDPEILTEEERHYLKRTGEKKKHYVPV 273
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G V NMHLHWK E VK+I K QA + A L S G+++ + S
Sbjct: 274 GRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQAHEYAEELARLSKGIVIDIKPNS--- 330
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQ 805
++ YRGK+Y +P + P + L+K KAL E R E L+H + RL E+E+
Sbjct: 331 IIIFYRGKNYVQPKVMSPPDTLSKAKAL----EKYRYEQSLEHTSQF---IERLEKELEE 383
Query: 806 MN 807
+
Sbjct: 384 YH 385
>gi|255567361|ref|XP_002524660.1| conserved hypothetical protein [Ricinus communis]
gi|223536021|gb|EEF37679.1| conserved hypothetical protein [Ricinus communis]
Length = 260
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL +A+RK LSK E AE DPE +T+EE+ ++ G + K F+L+GRRG
Sbjct: 73 KLEKAKRKEAWLIEKLSKFEVPKLRAE-TCDPEMLTEEEKHYLKRTGEKKKNFILVGRRG 131
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
VF G V NMHLHWK E VKII K Q + A L S G+++ I +++
Sbjct: 132 VFGGVVLNMHLHWKKHETVKIICKPCKPGQIHQYAEELARLSKGIVID---IRPNNSIIF 188
Query: 750 YRGKDYQRPSTLRPKNLLTKRKALAR 775
YRGK+Y +P+ + P + L+K KAL +
Sbjct: 189 YRGKNYVQPTVMSPPDTLSKNKALEK 214
>gi|449438181|ref|XP_004136868.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 352
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 90/176 (51%), Gaps = 22/176 (12%)
Query: 618 RRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGL 677
R+ A+L++KL K E KP + DPE +T+EE+ ++ G
Sbjct: 171 RKEAWLIEKLRK-------------------FEIPKPFVEKYDPEILTEEEKHYLKRTGE 211
Query: 678 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVS 737
+ K F+LLGRRGVF G V NMH+HWK E VK+I K Q + A L S G+++
Sbjct: 212 KKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVID 271
Query: 738 VDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
I +++ YRGK+Y +P + P N L+K KAL + Q E + + LE
Sbjct: 272 ---IKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQSLEHTSQFIEKLE 324
>gi|356524301|ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 630 KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRG 689
KL +A+RK L K + P E DPE +T+EER ++ G + K ++ +GRRG
Sbjct: 92 KLEKAKRKETWLVEKLRKFDVPKSPPE-TFDPEILTEEERHYLKRTGEKKKHYVPVGRRG 150
Query: 690 VFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVV 749
VF G V NMHLHWK E VK+I K Q + A L S G+++ I ++
Sbjct: 151 VFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNNTIIF 207
Query: 750 YRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQMN 807
YRGK+Y +P + P N L+K KAL E R E L+H + RL E+E+ +
Sbjct: 208 YRGKNYVQPEVMSPPNTLSKVKAL----EKYRYEQSLEHTSQF---IERLEKELEEYH 258
>gi|449479099|ref|XP_004155504.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 290
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 653 KPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIV 712
KP + DPE +T+EE+ ++ G + K F+LLGRRGVF G V NMH+HWK E VK+I
Sbjct: 125 KPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVIC 184
Query: 713 KVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKA 772
K Q + A L S G+++ I +++ YRGK+Y +P + P N L+K KA
Sbjct: 185 KPCKPGQVHEYAEELTRLSKGIVID---IKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKA 241
Query: 773 LARSIELQRQEALLKHVATLESNAGRLRSEIEQM 806
L + Q E + + LE + + Q
Sbjct: 242 LEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQF 275
>gi|326525483|dbj|BAJ88788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 5/199 (2%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K E P E DPE +T+EE+F ++ G + K ++ +
Sbjct: 136 RIRYKLEKAKRKEEWLIEKLRKYEAPRAP-EPVHDPEILTEEEKFYLKRTGEKKKNYVPV 194
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G V NMHLHWK E +K++ K Q + A L S G ++ I
Sbjct: 195 GRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARLSKGTVID---IKPNN 251
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQ 805
++ YRGK+Y +P + P + L+K+KAL + Q E K + LE + +
Sbjct: 252 TIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSKFIEQLEQELEDYQKHVAL 311
Query: 806 MNSVKGTGDEQLYDKLDSA 824
+G EQ+ ++ DSA
Sbjct: 312 FKKREGANSEQISNE-DSA 329
>gi|5123948|emb|CAB45506.1| putative protein [Arabidopsis thaliana]
gi|7268009|emb|CAB78349.1| putative protein [Arabidopsis thaliana]
Length = 332
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K + PAE DPES+T+EE+ ++ G + K F+L+
Sbjct: 134 RIRYKLEKAKRKEEWLIEKLRKYDVPKSPAE-PYDPESLTEEEQHYLKRTGEKRKNFVLV 192
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKISKG 744
GRRGVF G V N+HLHWK E VK+I K Q + A L S G+++ V
Sbjct: 193 GRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVK---PN 249
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVA 790
+V+YRGK+Y RP + P + L+K KAL E R E L+H +
Sbjct: 250 NTIVLYRGKNYVRPEVMSPVDTLSKDKAL----EKYRYEQSLEHTS 291
>gi|357131757|ref|XP_003567501.1| PREDICTED: uncharacterized protein LOC100829186 [Brachypodium
distachyon]
Length = 402
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 94/175 (53%), Gaps = 11/175 (6%)
Query: 619 RHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLR 678
R Y ++K + K A KL R E ++K E + A P+ + EERF +K+ +
Sbjct: 138 RLKYKIEKAKLKEAMLIEKLKRYE--VAKAEGPV------AKPDDLNGEERFYLKKVSQK 189
Query: 679 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 738
++ +GRRGVF G + NMHLHWK E VK+I K Q ++ A + SGGV ++
Sbjct: 190 KSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGVPIN- 248
Query: 739 DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
I +V YRGKDY +P + P + L+K+KAL +S Q E + + +A E
Sbjct: 249 --IVGNDTVVFYRGKDYVQPDVMSPIDTLSKKKALEKSKYEQSLETVRRFIAVSE 301
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 459 LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKL 518
L+++++ + +GR G+ + M W+K K+ K + + +I +L
Sbjct: 183 LKKVSQKKSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICK-PCKPGQIQEYASEIARL 241
Query: 519 TGGTLLS-RNKDFLVFYRGKNFLSPDV---TEALQERERLAKS 557
+GG ++ D +VFYRGK+++ PDV + L +++ L KS
Sbjct: 242 SGGVPINIVGNDTVVFYRGKDYVQPDVMSPIDTLSKKKALEKS 284
>gi|42566743|ref|NP_193043.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|51968644|dbj|BAD43014.1| putative protein [Arabidopsis thaliana]
gi|51971084|dbj|BAD44234.1| putative protein [Arabidopsis thaliana]
gi|51971893|dbj|BAD44611.1| putative protein [Arabidopsis thaliana]
gi|63003852|gb|AAY25455.1| At4g13070 [Arabidopsis thaliana]
gi|115646846|gb|ABJ17138.1| At4g13070 [Arabidopsis thaliana]
gi|332657826|gb|AEE83226.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 343
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K + PAE DPES+T+EE+ ++ G + K F+L+
Sbjct: 145 RIRYKLEKAKRKEEWLIEKLRKYDVPKSPAE-PYDPESLTEEEQHYLKRTGEKRKNFVLV 203
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKISKG 744
GRRGVF G V N+HLHWK E VK+I K Q + A L S G+++ V
Sbjct: 204 GRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVK---PN 260
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVA 790
+V+YRGK+Y RP + P + L+K KAL E R E L+H +
Sbjct: 261 NTIVLYRGKNYVRPEVMSPVDTLSKDKAL----EKYRYEQSLEHTS 302
>gi|115467732|ref|NP_001057465.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|113595505|dbj|BAF19379.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|125596971|gb|EAZ36751.1| hypothetical protein OsJ_21087 [Oryza sativa Japonica Group]
Length = 348
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 111/222 (50%), Gaps = 25/222 (11%)
Query: 584 GTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKL------ARAERK 637
G AGT + R G+ + K+ + R+A+V + + K +KK+ R K
Sbjct: 94 GDAGTKQ----GAGRKGQPPAKAAKKKMSRKAKVNQLKWYRLKAKKKMKSPNPEVRIRYK 149
Query: 638 LLRAERA-------LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGV 690
L +A+R L K E P E DPE +T+EE+F ++ G + K ++ +GRRGV
Sbjct: 150 LEKAKRKEEWLIEKLRKYEVPRSP-EPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGV 208
Query: 691 FDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVY 750
F G V NMHLHWK E VK+I K Q + A L S G ++ I ++ Y
Sbjct: 209 FGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVID---IKPNNTIIFY 265
Query: 751 RGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATL 792
RGK+Y +P + P + L+K+KAL E R E L+H +
Sbjct: 266 RGKNYVQPKVMSPPDTLSKQKAL----EKYRYEQSLEHTSQF 303
>gi|242055631|ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
gi|241928936|gb|EES02081.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
Length = 405
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 4/168 (2%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
+L+ K+ +A+ K +R L K E + K A P+ ++ EERF +K+ + ++ +
Sbjct: 136 RLKYKIEKAKLKEVRLVEKLKKYEVA-KAQGPMAKPDDLSGEERFYLKKVSQKKSNYVPV 194
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G + NMHLHWK E VK+I K Q ++ A + SGG+ V+ I
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVN---IIGDD 251
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
+V YRGK+Y +P + P + L+K+KAL +S Q E + + +A E
Sbjct: 252 TIVFYRGKNYVQPEVMSPIDTLSKKKALEKSKYEQSLETVRRFIAISE 299
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 444 PYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGV 503
P L+ +E L+++++ + +GR G+ + M W+K K+ K
Sbjct: 166 PMAKPDDLSGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICK-PC 224
Query: 504 QLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEALQERERLAKS 557
+ + +I +L+GG ++ D +VFYRGKN++ P+V + L +++ L KS
Sbjct: 225 KPGQIQEYANEIARLSGGIPVNIIGDDTIVFYRGKNYVQPEVMSPIDTLSKKKALEKS 282
>gi|225444203|ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Vitis vinifera]
gi|296089227|emb|CBI38999.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K + P E DPE +T+EE+F ++ G + K ++ +
Sbjct: 85 RIRYKLEKAKRKEEWLIEKLRKFDIPKAPTE-AYDPEILTEEEKFYLKRTGEKKKNYVPV 143
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G V NMHLHWK E VK+I K Q + A L S G+++ I
Sbjct: 144 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKVGQVYEYAEELARLSKGIMID---IKPNN 200
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQ 805
++ YRGK+Y +P + P + L+K KAL E R E L+H + +L +E+E+
Sbjct: 201 TIIFYRGKNYVQPQVMSPPDTLSKSKAL----EKYRYEQSLEHTSQF---IEKLENELEE 253
Query: 806 MN 807
+
Sbjct: 254 YH 255
>gi|255585329|ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
gi|223526802|gb|EEF29024.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 24/200 (12%)
Query: 613 REAEVRRHA-------YLVQKLEKKLARAERKL-LRAERALSKVEESL-----------K 653
RE E RR A V++ ++K A AE ++ + ERA K++E+L K
Sbjct: 76 REKEKRRAANRRDPRCLTVKRKKQKFANAEERIKYKLERA--KIKEALLVERLKRYEVPK 133
Query: 654 PAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 713
+ P +T EERF +K+ + ++ LGRRGVF G + NMH+HWK E VK+I
Sbjct: 134 VQGPEVKPHDLTGEERFFMKKMAQKQSNYVPLGRRGVFGGVILNMHMHWKKHETVKVICN 193
Query: 714 VKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKAL 773
Q + A + SGG+ + V I ++ YRGK+Y +P + P + L+K++AL
Sbjct: 194 FCKPGQVHEYAQEIARLSGGIPIQV--IGDD-TIIFYRGKNYVQPEVMSPIDTLSKKRAL 250
Query: 774 ARSIELQRQEALLKHVATLE 793
+S Q E++ + +A E
Sbjct: 251 EKSKYEQSLESVRRFIAIAE 270
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 23/285 (8%)
Query: 433 VPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKS 492
VP Q P V P+ L +E ++++A+ + LGR G+ + M W+K
Sbjct: 131 VPKVQGP-EVKPHD----LTGEERFFMKKMAQKQSNYVPLGRRGVFGGVILNMHMHWKKH 185
Query: 493 SIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEAL 548
K+ E ++I +L+GG + D ++FYRGKN++ P+V + L
Sbjct: 186 ETVKVICNFCKPGQVHE-YAQEIARLSGGIPIQVIGDDTIIFYRGKNYVQPEVMSPIDTL 244
Query: 549 QERERLAKSLQDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHK 608
++ L KS ++ ++ R A +E + + D N R + DS
Sbjct: 245 SKKRALEKSKYEQSLESVRRFIAIAEKELELYYRH-----IALYGDPNDRNLLSVLDSPT 299
Query: 609 ENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEE 668
+ E+R+ + + +E + + +S++E+ A +SITD +
Sbjct: 300 NDFKESGELRKESNYLSSHGFAPGVSETEDDSTDSEVSEIEDEDVSASESDSTDSITDSD 359
Query: 669 RFMFRKLGLR----MKAFLLLGR----RGVFDGTVENMHLHWKYR 705
+K G+ M++ +LGR FD N KYR
Sbjct: 360 DEEIQKEGISLMTVMRSSTMLGRSSKVENNFDTENHNCPREIKYR 404
>gi|326506924|dbj|BAJ91503.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 56/75 (74%)
Query: 398 YEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKEAT 457
YE EV +LLD LGPR+ DW PLPVDAD+LP +VPG++ PFR P GVR TLA +E T
Sbjct: 20 YEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEELT 79
Query: 458 NLQRLARVLPPHFAL 472
L++LAR LP HFAL
Sbjct: 80 YLRKLARPLPTHFAL 94
>gi|162459283|ref|NP_001105859.1| LOC732768 [Zea mays]
gi|89212802|gb|ABD63903.1| CFM6 [Zea mays]
gi|413918693|gb|AFW58625.1| hypothetical protein ZEAMMB73_217436 [Zea mays]
Length = 338
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 602 RLDDSHKENLVREAEVRRHAYLVQKLEKKL------ARAERKLLRAERA-------LSKV 648
R K+ + R+A+V + + K +KK+ R KL +A+R L K
Sbjct: 96 RQQPPPKKKMSRKAKVNQLKWYRLKAKKKMKSPNPEVRIRYKLEKAKRKEEWLIEKLRKY 155
Query: 649 EESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 708
E P E DPE +T+EE+F ++ G + K ++ +GRRGVF G V NMHLHWK E V
Sbjct: 156 EVPRTP-EPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETV 214
Query: 709 KIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLT 768
K++ K Q + A L S G ++ I ++ YRGK+Y +P + P L+
Sbjct: 215 KVVCKPCRPGQVYEYAEELTRLSKGTVID---IKPNNTIMFYRGKNYVQPKVMSPPETLS 271
Query: 769 KRKALARSIELQRQEALLKHVATLESNAGRLRSEIEQM-NSVKGTGDEQLYDK---LDSA 824
K+KAL + LQ E + + LE + + N KG E++ ++ +D
Sbjct: 272 KQKALEKYRYLQSLEHTSQFIEKLEKELEDYKKHVALFKNHNKGVAIEKISNEDTTVDDP 331
Query: 825 YATED 829
T D
Sbjct: 332 ATTSD 336
>gi|357124470|ref|XP_003563923.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 337
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 600 GKRLDDSHKENLVREAEVRRHAYLVQKLEKKL------ARAERKLLRAERALSKVEESLK 653
G++ ++K+ + R+++V + + K +KK+ R KL +A+R + E L+
Sbjct: 94 GQKQPPANKKKMSRKSKVNQLKWFRLKAKKKMKSPNPEVRIRYKLEKAKRKEEWLIEKLR 153
Query: 654 P------AERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 707
E DPE +T+EE+F ++ G + K ++ +GRRGVF G V NMHLHWK E
Sbjct: 154 KYEVPRVPEPVHDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHET 213
Query: 708 VKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLL 767
+K++ K Q + A L S G ++ I ++ YRGK+Y +P + P + L
Sbjct: 214 MKVVCKPCRPGQVYEYAEELARLSKGTVID---IKPNNTIIFYRGKNYVQPKVMSPPDTL 270
Query: 768 TKRKALARSIELQRQEALLKHVATL 792
+K+KAL E R E L+H +
Sbjct: 271 SKQKAL----EKYRYEQSLEHTSQF 291
>gi|297790600|ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309019|gb|EFH39444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 94/169 (55%), Gaps = 15/169 (8%)
Query: 626 KLEKKLARAERK---LLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 682
++ KL +A+RK L+ R + S +P DPES+T+EE+ ++ G + K F
Sbjct: 145 RIRYKLEKAKRKEEWLIEKLRKYDVPKSSAEPY----DPESLTEEEQHYLKRTGEKRKNF 200
Query: 683 LLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKI 741
+L+GRRGVF G V N+HLHWK E VK+I K Q + A L S G+++ V
Sbjct: 201 VLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPN 260
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVA 790
+ +V+YRGK+Y RP + P + L+K KAL E R E L+H +
Sbjct: 261 N---TIVLYRGKNYVRPEVMSPVDTLSKDKAL----EKYRYEQSLEHTS 302
>gi|125555042|gb|EAZ00648.1| hypothetical protein OsI_22670 [Oryza sativa Indica Group]
Length = 304
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K E P E DPE +T+EE+F ++ G + K ++ +
Sbjct: 121 RIRYKLEKAKRKEEWLIEKLRKYEVPRSP-EPVHDPEILTEEEKFYLKRTGEKKKNYVPV 179
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G V NMHLHWK E VK+I K Q + A L S G ++ I
Sbjct: 180 GRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVID---IKPNN 236
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVA-TLES 794
++ YRGK+Y +P + P + L+K+K + Q+ AL K+ TLE+
Sbjct: 237 TIIFYRGKNYVQPKVMSPPDTLSKQKLEKELEDYQKHVALFKNRGETLET 286
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 451 LARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSER 510
L +E L+R + +GR G+ + M W+K K+ K E
Sbjct: 158 LTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYE- 216
Query: 511 MVEDIKKLTGGTLLS-RNKDFLVFYRGKNFLSPDVTEALQ--ERERLAKSLQDEEEQARL 567
E++ +L+ GT++ + + ++FYRGKN++ P V +++L K L+D ++ L
Sbjct: 217 YAEELTRLSKGTVIDIKPNNTIIFYRGKNYVQPKVMSPPDTLSKQKLEKELEDYQKHVAL 276
>gi|449437795|ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
gi|449494725|ref|XP_004159629.1| PREDICTED: uncharacterized LOC101208777 [Cucumis sativus]
Length = 431
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
P +T EERF +K+G + ++ +GRRGVF G + NMH+HWK E VK+ K Q
Sbjct: 165 PHDLTGEERFYIKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQV 224
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 780
+ A + SGG+ + +I ++ YRGKDY +P + P + L+K++AL +S Q
Sbjct: 225 HEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQ 281
Query: 781 RQEALLKHVATLE 793
E++ + +A E
Sbjct: 282 SLESVRRFIAIAE 294
>gi|356544514|ref|XP_003540695.1| PREDICTED: uncharacterized protein LOC100796393 [Glycine max]
Length = 426
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
P+ +T EERF +K+ + +L +GRRG+F G V NMH+HWK E VK+ K Q
Sbjct: 169 PDDLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCKPCKPGQV 228
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 780
+ A L SGG+ + +I ++ YRGK+Y++P + P + L+K+KAL +S Q
Sbjct: 229 HEYAQELARLSGGIPL---QIIGDDTIIFYRGKNYEQPEVMSPIDTLSKKKALEKSKYEQ 285
Query: 781 RQEALLKHVATLE 793
E++ + +A E
Sbjct: 286 SLESVRRFIAIAE 298
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 433 VPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKS 492
VP Q P V P L +E L+++A+ + +GR G+ + M W+K
Sbjct: 159 VPKAQGPV-VKP----DDLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKH 213
Query: 493 SIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEAL 548
K+ K E +++ +L+GG L D ++FYRGKN+ P+V + L
Sbjct: 214 ETVKVFCKPCKPGQVHE-YAQELARLSGGIPLQIIGDDTIIFYRGKNYEQPEVMSPIDTL 272
Query: 549 QERERLAKS 557
+++ L KS
Sbjct: 273 SKKKALEKS 281
>gi|297822421|ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
gi|297324932|gb|EFH55352.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 124/261 (47%), Gaps = 34/261 (13%)
Query: 595 ANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLKP 654
AN + +RL K+ AE R Y ++K + K A KL R E ++KV+
Sbjct: 101 ANRKDPRRLTVKGKKKKFVNAE-ERIKYKLEKAKIKEALLIEKLKRYE--VAKVQGP--- 154
Query: 655 AERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKV 714
+ P IT EERF +K+G + ++ +GRRGVF G + NMHLHWK E VK+I
Sbjct: 155 ---EVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNN 211
Query: 715 KTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALA 774
Q ++ A L SGGV V+ I ++ YRGK Y +P + P + L+K++A
Sbjct: 212 SKPGQVQQYAEELAKLSGGVPVN---IIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYE 268
Query: 775 RS--------------IELQRQEALLKHVATLESNAGRLRSEI--EQMNSVKGTGDEQLY 818
+S I + E +HVA + R I + + + D +LY
Sbjct: 269 KSKYEQSLESVRHSIAIAEKELELYYRHVALYDDPNNRNPLSILDDSPSESRQHHDNELY 328
Query: 819 -DKLDSAYATEDDDSEDEGDE 838
LD+ D +SEDEG+E
Sbjct: 329 LSCLDT-----DANSEDEGEE 344
>gi|15226402|ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|4510396|gb|AAD21483.1| hypothetical protein [Arabidopsis thaliana]
gi|44917583|gb|AAS49116.1| At2g28480 [Arabidopsis thaliana]
gi|110741747|dbj|BAE98819.1| hypothetical protein [Arabidopsis thaliana]
gi|330253035|gb|AEC08129.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 372
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 658 QADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTF 717
+ P IT EERF +K+G + ++ +GRRGVF G + NMHLHWK E VK+I
Sbjct: 158 EVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKP 217
Query: 718 DQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSI 777
Q ++ A L SGGV V+ I ++ YRGK Y +P + P + L+K++A +S
Sbjct: 218 GQVQQYAEELAKLSGGVPVN---IIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSK 274
Query: 778 ELQRQEALLKHVATLE 793
Q E++ +A E
Sbjct: 275 YEQSLESVRHFIAIAE 290
>gi|226509977|ref|NP_001151028.1| CFM6 [Zea mays]
gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
gi|238011754|gb|ACR36912.1| unknown [Zea mays]
Length = 394
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 30/278 (10%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAE------RQADPESITDEERFMFRKLGLR 678
QK AR + K+ +A+ +++ E LK E A + ++ EERF +K+ +
Sbjct: 128 QKFPTPEARLKYKIEKAKLKEARLVEKLKKYEIAKAQGPMAKVDDLSGEERFYLKKVSQK 187
Query: 679 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 738
++ +GRRGVF G + NMHLHWK E VK+I K Q ++ A + SGG+ V+V
Sbjct: 188 KSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNV 247
Query: 739 ---DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESN 795
D I V YRGK Y +P + P + L+K+KAL +S Q E + + +A E
Sbjct: 248 IGDDTI------VFYRGKSYVQPEVMSPVDTLSKKKALEKSKYEQSLETVRRFIAISEKE 301
Query: 796 AGRLRSEIEQMN-SVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYL------EMYAGGN 848
+ S D D +++ + +G E +L +++ G
Sbjct: 302 LELYYRHVALYGISQSQKSDLVCGDDREASLLKMEGLDRGKGQEPHLATNHFSDLHIGDV 361
Query: 849 DNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESE 886
DE D+S Y A D ++ETE M S SE
Sbjct: 362 SESDEEDSSGSE--------YDADDDDNETESMASVSE 391
>gi|168020023|ref|XP_001762543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686276|gb|EDQ72666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 35/309 (11%)
Query: 619 RHAYLVQKLEKKLARAERKLL-RAERALSKV---EESLKP------AERQADPESITDEE 668
R L +KL K E+ L R E+ K+ EE LK E DPE +T E+
Sbjct: 170 RQIRLAKKLRKASMTPEQTFLWRIEKCKKKIALHEEQLKKFELPPLPEPDPDPEVLTPEQ 229
Query: 669 RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALE 728
+ +KLG + K ++ +GRRG++ GT++NMH+HWK E V+I ++ K++ LE
Sbjct: 230 LYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKEMGETLE 289
Query: 729 AESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRP---KNLLTKRKALARSIELQRQEAL 785
SGG+++ I +G ++++RG++Y+RP P KN KRKAL +S Q +L
Sbjct: 290 RLSGGIVID---IHQGTTIIMWRGRNYKRPKVDIPIIFKN-FNKRKALIKSKHEQSIGSL 345
Query: 786 LKHVATLESNAGRLRSEIEQMNSVKG------TGDEQLYDKLDSAYATEDDDSEDEGDEA 839
+ E + LR+++ + + + G + DDDS++ D +
Sbjct: 346 KDQIVKWEKDLRELRADMAREEAARARWLEENPGMAPPEPPAPVSVEQSDDDSDEVTDIS 405
Query: 840 YLEMYAGGNDNEDEIDNSTHNLEMESDFPYHAQDQESETELMDSESEAYTVHSTYCASTD 899
+D+ E+D+ + +SD+ Y +S+ +L D + ST S
Sbjct: 406 --------DDDITEVDDLGPEYDDDSDWEY----PDSDVDLPDRSVPSNDNASTSNVSDS 453
Query: 900 IVEEDNNFY 908
E ++N Y
Sbjct: 454 NDEWESNLY 462
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 253 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKR 312
L +L L+ L ++ K+ + G+ + +H WK E VR+ + P +K
Sbjct: 224 VLTPEQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKE 283
Query: 313 MHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPSVQLN---KRIYKRNELPASSVSQATD 368
M E LER +GG+VI GT + ++RG +Y+ P V + K KR L S Q+
Sbjct: 284 MGETLERLSGGIVIDIHQGTTIIMWRGRNYKRPKVDIPIIFKNFNKRKALIKSKHEQSIG 343
Query: 369 KQIHKQISMSVNLETASEEQETDFVRE 395
+ QI V E E D RE
Sbjct: 344 -SLKDQI---VKWEKDLRELRADMARE 366
>gi|57900097|dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900277|dbj|BAD87110.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|215695021|dbj|BAG90212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 417
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLK---------PAERQADPESITDEERFMFRKL 675
QK AR + K+ +A+ + + E LK P +Q D + EERF +K+
Sbjct: 127 QKFPTPEARLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDD---LDGEERFYLKKV 183
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
+ ++ +GRRGVF G + NMHLHWK E VK+I K Q ++ A + SGG
Sbjct: 184 SQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGG-- 241
Query: 736 VSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
+ ++ I +V YRGK+Y +P + P + L+K+KAL +S Q E + + +A E
Sbjct: 242 IPINTIGND-TIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSE 298
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 444 PYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGV 503
P + L +E L+++++ + +GR G+ + M W+K K+ K
Sbjct: 165 PMAKQDDLDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICK-PC 223
Query: 504 QLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEALQERERLAKS 557
+ + +I +L+GG ++ D +VFYRGKN++ PDV + L +++ L KS
Sbjct: 224 KPGQIQEYASEIARLSGGIPINTIGNDTIVFYRGKNYVQPDVMSPVDTLSKKKALEKS 281
>gi|57900098|dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900278|dbj|BAD87111.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
Length = 394
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLK---------PAERQADPESITDEERFMFRKL 675
QK AR + K+ +A+ + + E LK P +Q D + EERF +K+
Sbjct: 127 QKFPTPEARLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDD---LDGEERFYLKKV 183
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
+ ++ +GRRGVF G + NMHLHWK E VK+I K Q ++ A + SGG
Sbjct: 184 SQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGG-- 241
Query: 736 VSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
+ ++ I +V YRGK+Y +P + P + L+K+KAL +S Q E + + +A E
Sbjct: 242 IPINTIGND-TIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSE 298
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 444 PYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGV 503
P + L +E L+++++ + +GR G+ + M W+K K+ K
Sbjct: 165 PMAKQDDLDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICK-PC 223
Query: 504 QLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEALQERERLAKS 557
+ + +I +L+GG ++ D +VFYRGKN++ PDV + L +++ L KS
Sbjct: 224 KPGQIQEYASEIARLSGGIPINTIGNDTIVFYRGKNYVQPDVMSPVDTLSKKKALEKS 281
>gi|359478175|ref|XP_002266278.2| PREDICTED: uncharacterized protein LOC100250974 [Vitis vinifera]
Length = 711
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
P ++T EERF +K+ + ++ +GRRGVF G + NMH+HWK E VK+I K Q
Sbjct: 451 PVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQV 510
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 780
+ A + SGG + +I ++ YRGK+Y +P + P + L+K++AL +S Q
Sbjct: 511 HEYANEIARLSGGTPI---QIIGDDTIIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQ 567
Query: 781 RQEALLKHVATLE 793
E++ + +A E
Sbjct: 568 SLESVRRFIAIAE 580
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 433 VPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKS 492
VP Q P V P L +E ++++A+ + +GR G+ + M W+K
Sbjct: 441 VPKLQGPI-VQPVN----LTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKH 495
Query: 493 SIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDVTEAL 548
K+ K E +I +L+GGT + D ++FYRGKN++ P+V +
Sbjct: 496 ETVKVICKPCKPGQVHE-YANEIARLSGGTPIQIIGDDTIIFYRGKNYVQPEVMSPI 551
>gi|115442347|ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|57900096|dbj|BAD88158.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900276|dbj|BAD87109.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|215768161|dbj|BAH00390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189771|gb|EEC72198.1| hypothetical protein OsI_05277 [Oryza sativa Indica Group]
gi|222619906|gb|EEE56038.1| hypothetical protein OsJ_04827 [Oryza sativa Japonica Group]
Length = 415
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 15/178 (8%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLK---------PAERQADPESITDEERFMFRKL 675
QK AR + K+ +A+ + + E LK P +Q D + EERF +K+
Sbjct: 127 QKFPTPEARLKYKIEKAKLKEAMLVEKLKKYEIAKAQGPMAKQDD---LDGEERFYLKKV 183
Query: 676 GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVL 735
+ ++ +GRRGVF G + NMHLHWK E VK+I K Q ++ A + SGG
Sbjct: 184 SQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGG-- 241
Query: 736 VSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
+ ++ I +V YRGK+Y +P + P + L+K+KAL +S Q E + + +A E
Sbjct: 242 IPINTIGND-TIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSE 298
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 444 PYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGV 503
P + L +E L+++++ + +GR G+ + M W+K K+ K
Sbjct: 165 PMAKQDDLDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICK-PC 223
Query: 504 QLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEALQERERLAKS 557
+ + +I +L+GG ++ D +VFYRGKN++ PDV + L +++ L KS
Sbjct: 224 KPGQIQEYASEIARLSGGIPINTIGNDTIVFYRGKNYVQPDVMSPVDTLSKKKALEKS 281
>gi|297743805|emb|CBI36688.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
P ++T EERF +K+ + ++ +GRRGVF G + NMH+HWK E VK+I K Q
Sbjct: 72 PVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQV 131
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 780
+ A + SGG + +I ++ YRGK+Y +P + P + L+K++AL +S Q
Sbjct: 132 HEYANEIARLSGGTPI---QIIGDDTIIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQ 188
Query: 781 RQEALLKHVATLE 793
E++ + +A E
Sbjct: 189 SLESVRRFIAIAE 201
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 433 VPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKS 492
VP Q P V P L +E ++++A+ + +GR G+ + M W+K
Sbjct: 62 VPKLQGPI-VQPV----NLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKH 116
Query: 493 SIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEAL 548
K+ K E +I +L+GGT + D ++FYRGKN++ P+V + L
Sbjct: 117 ETVKVICKPCKPGQVHE-YANEIARLSGGTPIQIIGDDTIIFYRGKNYVQPEVMSPIDTL 175
Query: 549 QERERLAKS 557
++ L KS
Sbjct: 176 SKKRALEKS 184
>gi|359488800|ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
Length = 666
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 19/172 (11%)
Query: 616 EVRRHAYLVQKLEKKLARAERKLL----RAERALSKVEESLK-------PAERQADPESI 664
EVRR QKL KKL E +L+ RA++ ++ + + LK PA R DPE +
Sbjct: 80 EVRR----AQKLRKKLMTDEERLIYNLRRAKKKVALLLQKLKKYELPELPAPRH-DPELL 134
Query: 665 TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIA 724
T E+ ++K+G R K ++ +G RGVF G V+NMHLHWK+ E V++ ++ K++A
Sbjct: 135 TAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMA 194
Query: 725 LALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARS 776
L SGG++++V + ++++RG++Y++P L P N LTKRKAL ++
Sbjct: 195 TMLARLSGGIVINVHDVK---TIIMFRGRNYRQPKNLIPINTLTKRKALFKA 243
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L +L+ + + F+ K+ + G+ VV +H WK E V++ + P +K M
Sbjct: 134 LTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEM 193
Query: 314 HEILERKTGGLVI-WRSGTAVSLYRGVSYEVPS--VQLNKRIYKRNELPASSVSQATD-- 368
+L R +GG+VI + ++RG +Y P + +N + KR L + QA D
Sbjct: 194 ATMLARLSGGIVINVHDVKTIIMFRGRNYRQPKNLIPINT-LTKRKALFKARFEQALDSQ 252
Query: 369 ----KQIHKQI-SMSVNLE 382
K+I +Q+ M VN E
Sbjct: 253 KLNIKKIEQQLRRMGVNPE 271
>gi|147820521|emb|CAN67658.1| hypothetical protein VITISV_012474 [Vitis vinifera]
Length = 375
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
P ++T EERF +K+ + ++ +GRRGVF G + NMH+HWK E VK+I K Q
Sbjct: 115 PVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKPCKPGQV 174
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQ 780
+ A + SGG + +I ++ YRGK+Y +P + P + L+K++AL +S Q
Sbjct: 175 HEYANEIARLSGGTPI---QIIGDDTIIFYRGKNYVQPEXMSPIDTLSKKRALEKSKYEQ 231
Query: 781 RQEALLKHVATLE 793
E++ + +A E
Sbjct: 232 SLESVRRFIAIAE 244
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 433 VPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKS 492
VP Q P V P L +E ++++A+ + +GR G+ + M W+K
Sbjct: 105 VPKLQGPI-VQPV----NLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKH 159
Query: 493 SIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEAL 548
K+ K E +I +L+GGT + D ++FYRGKN++ P+ + L
Sbjct: 160 ETVKVICKPCKPGQVHE-YANEIARLSGGTPIQIIGDDTIIFYRGKNYVQPEXMSPIDTL 218
Query: 549 QERERLAKS 557
++ L KS
Sbjct: 219 SKKRALEKS 227
>gi|224128874|ref|XP_002328988.1| predicted protein [Populus trichocarpa]
gi|222839222|gb|EEE77573.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K+E P E DPE +T+EE+ ++ G + K ++ +
Sbjct: 142 RIRYKLEKAKRKEAWLIEKLRKLEVPKTPGE-AYDPEILTEEEKHYLKRTGEKKKNYVPV 200
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF G V NMHLHWK E VK+ K Q + A L S G+ + I
Sbjct: 201 GRRGVFGGVVLNMHLHWKKHETVKVTCKPCKPGQIDEYAEELARLSKGIAID---IRPDN 257
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATL 792
++ YRGK+Y +P + P + L+K KAL E R E L+H +
Sbjct: 258 TIIFYRGKNYVQPKIMSPPDTLSKDKAL----EKYRYEQSLEHTSQF 300
>gi|224095670|ref|XP_002310431.1| predicted protein [Populus trichocarpa]
gi|222853334|gb|EEE90881.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAE------RQADPESITDEERFMFRKLGLR 678
QK R + KL RA +K+ E LK E + P +T EERF +K+ +
Sbjct: 68 QKFANVEERIKTKLERARIKEAKLVERLKRYEVPKMQGPEVKPHELTGEERFFMKKMAQK 127
Query: 679 MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFD-QAKKIALALEAESGGVLVS 737
++ +GRRGVF G + NMH+HWK E VK+I Q ++ A + SGG+ +
Sbjct: 128 KSNYVPIGRRGVFGGVILNMHMHWKKHETVKVICNSSCKPGQVQEFAQEIARLSGGIPI- 186
Query: 738 VDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE 793
+I ++ YRGK+Y +P + P + L+K+KAL +S Q E + +A E
Sbjct: 187 --QIIGDDTVIFYRGKNYVQPKVMSPVDTLSKKKALEKSKYEQSLETVRHFIAIAE 240
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 433 VPGYQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKS 492
VP Q P V P+ L +E ++++A+ + +GR G+ + M W+K
Sbjct: 100 VPKMQGP-EVKPH----ELTGEERFFMKKMAQKKSNYVPIGRRGVFGGVILNMHMHWKKH 154
Query: 493 SIAKIALKRGVQLTTSERMVEDIKKLTGGTLLSR-NKDFLVFYRGKNFLSPDV---TEAL 548
K+ + + ++I +L+GG + D ++FYRGKN++ P V + L
Sbjct: 155 ETVKVICNSSCKPGQVQEFAQEIARLSGGIPIQIIGDDTVIFYRGKNYVQPKVMSPVDTL 214
Query: 549 QERERLAKS 557
+++ L KS
Sbjct: 215 SKKKALEKS 223
>gi|296087592|emb|CBI34848.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 102/170 (60%), Gaps = 19/170 (11%)
Query: 616 EVRRHAYLVQKLEKKLARAERKLL----RAERALSKVEESLK-------PAERQADPESI 664
EVRR QKL KKL E +L+ RA++ ++ + + LK PA R DPE +
Sbjct: 95 EVRR----AQKLRKKLMTDEERLIYNLRRAKKKVALLLQKLKKYELPELPAPRH-DPELL 149
Query: 665 TDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIA 724
T E+ ++K+G R K ++ +G RGVF G V+NMHLHWK+ E V++ ++ K++A
Sbjct: 150 TAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMA 209
Query: 725 LALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALA 774
L SGG++++V + ++++RG++Y++P L P N LTKRKA A
Sbjct: 210 TMLARLSGGIVINVHDVK---TIIMFRGRNYRQPKNLIPINTLTKRKATA 256
>gi|357521229|ref|XP_003630903.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355524925|gb|AET05379.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 318
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 626 KLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLL 685
++ KL +A+RK L K + P E DPE +T+EER ++ G + K ++ +
Sbjct: 150 RIRYKLEKAKRKETWLIEKLRKFDVPKLPTE-TFDPEILTEEERHYLKRTGEKKKHYVPV 208
Query: 686 GRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGY 745
GRRGVF V NMHLHWK E VK+I K QA + L S G+++ I
Sbjct: 209 GRRGVFGEVVLNMHLHWKKHETVKVICKPCKPGQAHEYTEELTRPSKGIVID---IKPNN 265
Query: 746 AMVVYRGKDYQRPSTLRPKNLLTKRKA 772
++ YRG++Y +P + P + L+K K
Sbjct: 266 IIIFYRGRNYVQPKVMSPPDTLSKAKV 292
>gi|356513969|ref|XP_003525680.1| PREDICTED: uncharacterized protein LOC100780131 [Glycine max]
Length = 653
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K E P R DPE +T E+ ++K+G R K ++
Sbjct: 113 ERLIYNLKRAKKKVALLLQKLKKYELPELPPPRH-DPELLTPEQLQAYKKIGFRNKNYVP 171
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMHLHWK+ E V++ ++ K++A L SGG++++V +
Sbjct: 172 VGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVK-- 229
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 799
++++RG++Y++P L P N LTKRKAL ++ Q E+ ++ +E R+
Sbjct: 230 -TIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 283
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL PE +L+ + + F+ K+ + G+ VV +H WK E V++ + P +
Sbjct: 149 ELLTPE-QLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKI 207
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPS--VQLNKRIYKRNELPASSVSQAT 367
K M +L R +GG+VI + + ++RG +Y P + +N + KR L + QA
Sbjct: 208 KEMASMLARLSGGIVINVHNVKTIIMFRGRNYRQPKNLIPINT-LTKRKALFKARFEQAL 266
Query: 368 D------KQIHKQI-SMSVNLE 382
+ K+I +Q+ M VN E
Sbjct: 267 ESQKLNIKKIEQQLRRMGVNPE 288
>gi|388504790|gb|AFK40461.1| unknown [Medicago truncatula]
Length = 190
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 251 ELTLP---ESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPA 307
E+T+P + EL RLR + K K I +GLT++V+ IH +W T+E+V+LK
Sbjct: 100 EVTVPCLEKEELSRLRTMGIHLKQKISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLV 159
Query: 308 LNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
NM H I++R+TGGLVIWRSG+ + +YRG
Sbjct: 160 QNMNLAHNIVQRRTGGLVIWRSGSVMWVYRG 190
>gi|356573355|ref|XP_003554827.1| PREDICTED: uncharacterized protein LOC100782246 [Glycine max]
Length = 653
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K E P R DPE +T E+ ++K+G R K ++
Sbjct: 113 ERLIYNLKRAKKKVALLLQKLKKYELPELPHPRH-DPELLTPEQLQAYKKIGFRNKNYVP 171
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMHLHWK+ E V++ ++ K++A L SGG++++V +
Sbjct: 172 VGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVK-- 229
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 799
++++RG++Y++P L P N LTKRKAL ++ Q E+ ++ +E R+
Sbjct: 230 -TIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 283
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL PE +L+ + + F+ K+ + G+ VV +H WK E V++ + P +
Sbjct: 149 ELLTPE-QLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKI 207
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPS--VQLNKRIYKRNELPASSVSQAT 367
K M +L R +GG+VI + + ++RG +Y P + +N + KR L + QA
Sbjct: 208 KEMASMLARLSGGIVINVHNVKTIIMFRGRNYRQPKNLIPINT-LTKRKALFKARFEQAL 266
Query: 368 D------KQIHKQI-SMSVNLE 382
+ K+I +Q+ M VN E
Sbjct: 267 ESQKLNIKKIEQQLRRMGVNPE 288
>gi|357134703|ref|XP_003568955.1| PREDICTED: uncharacterized protein LOC100832553 [Brachypodium
distachyon]
Length = 562
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 570 SAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREA-----EVRRHAYLV 624
S ++P++E G G + + G+ + ++ + RE E+RR L
Sbjct: 49 SGALVPAVE----GGGGGVCRRLMSTTK--GRSMRSKVEKRMARETGRTQRELRRAVKLR 102
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLK-------PAERQADPESITDEERFMFRKLGL 677
+KL R + RA++ ++ + + LK PA R DPE +T E+ ++K+G
Sbjct: 103 KKLMTDDERLIHSMRRAKKKVALLLQKLKKYELPDLPAPRH-DPELLTAEQLQAYKKIGF 161
Query: 678 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVS 737
R + ++ +G RGVF G V+NMH+HWK+ E V++ ++ K++A L SGG++V+
Sbjct: 162 RNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVVN 221
Query: 738 VDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAG 797
+ ++++RG++Y++P L P N LTKRKAL ++ Q E+ ++ +E+
Sbjct: 222 IHNTK---TIIMFRGRNYRQPKNLIPFNTLTKRKALFKARYEQALESQKLNIKKIETQLR 278
Query: 798 R 798
R
Sbjct: 279 R 279
>gi|413950005|gb|AFW82654.1| hypothetical protein ZEAMMB73_283519 [Zea mays]
Length = 645
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 26/227 (11%)
Query: 587 GTLKETLDANSRW-------GKRLDDSHKENLVREA-----EVRRHAYLVQKL----EK- 629
G L A SRW G+ + ++ + RE E+RR L +KL EK
Sbjct: 38 GLLAVGAGAYSRWRRAMSTKGRSMRSKVEKRMARETGRTQRELRRAVKLRKKLMTEDEKL 97
Query: 630 --KLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGR 687
L RA++K+ + L K E PA R DPE +T E+ ++K+G R + ++ +G
Sbjct: 98 IYNLRRAKKKVALLLQKLKKYELPDLPAPRH-DPELLTAEQLQAYKKIGFRNRNYVPVGV 156
Query: 688 RGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAM 747
RGVF G V+NMH+HWK+ E V++ ++ K++A L SGG+++++ +
Sbjct: 157 RGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TI 213
Query: 748 VVYRGKDYQRPSTLRPKNLLTKRKALARS---IELQRQEALLKHVAT 791
+++RG++Y++P L P N LTKRKAL ++ L+ Q+ +K + T
Sbjct: 214 IMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQALESQKLNIKKIET 260
>gi|449450187|ref|XP_004142845.1| PREDICTED: uncharacterized protein LOC101215761 [Cucumis sativus]
Length = 619
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K E P R DPE +T E+ ++K+G R + ++
Sbjct: 111 ERLLYNLKRAKKKVALLLQQLKKYELPELPPPRH-DPELLTPEQLQAYKKIGFRNRNYVP 169
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMHLHWK+ E V++ ++ K++A L SGG++V++ +
Sbjct: 170 VGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVK-- 227
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARS 776
++++RG++Y++P L P N LTKRKAL ++
Sbjct: 228 -TIIMFRGRNYRQPKNLIPINTLTKRKALFKA 258
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL PE +L+ + + F+ ++ + G+ VV +H WK E V++ + P +
Sbjct: 147 ELLTPE-QLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKI 205
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPS--VQLNKRIYKRNELPASSVSQAT 367
K M +L R +GG+V+ + ++RG +Y P + +N + KR L + QA
Sbjct: 206 KEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQPKNLIPINT-LTKRKALFKARFEQAL 264
Query: 368 DKQ 370
D Q
Sbjct: 265 DSQ 267
>gi|242086871|ref|XP_002439268.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
gi|241944553|gb|EES17698.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
Length = 652
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 14/188 (7%)
Query: 614 EAEVRRHAYLVQKL----EK---KLARAERKLLRAERALSKVEESLKPAERQADPESITD 666
+ E+RR L +KL EK L RA++K+ + L K E PA R DPE +T
Sbjct: 78 QRELRRAVKLRKKLMTEDEKLIYNLRRAKKKVALLLQKLKKYELPDLPAPRH-DPELLTA 136
Query: 667 EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALA 726
E+ ++K+G R + ++ +G RGVF G V+NMH+HWK+ E V++ ++ K++A
Sbjct: 137 EQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAM 196
Query: 727 LEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARS---IELQRQE 783
L SGG+++++ ++++RG++Y++P L P N LTKRKAL ++ L+ Q+
Sbjct: 197 LTRLSGGIVINIHNTK---TIIMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQALESQK 253
Query: 784 ALLKHVAT 791
+K + T
Sbjct: 254 LNIKKIET 261
>gi|449483922|ref|XP_004156733.1| PREDICTED: uncharacterized protein LOC101226279 [Cucumis sativus]
Length = 619
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K E P R DPE +T E+ ++K+G R + ++
Sbjct: 111 ERLLYNLKRAKKKVALLLQQLKKYELPELPPPRH-DPELLTPEQLQAYKKIGFRNRNYVP 169
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMHLHWK+ E V++ ++ K++A L SGG++V++ +
Sbjct: 170 VGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVK-- 227
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARS 776
++++RG++Y++P L P N LTKRKAL ++
Sbjct: 228 -TIIMFRGRNYRQPKNLIPINTLTKRKALFKA 258
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL PE +L+ + + F+ ++ + G+ VV +H WK E V++ + P +
Sbjct: 147 ELLTPE-QLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKI 205
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPS--VQLNKRIYKRNELPASSVSQAT 367
K M +L R +GG+V+ + ++RG +Y P + +N + KR L + QA
Sbjct: 206 KEMATMLARLSGGIVVNIHDVKTIIMFRGRNYRQPKNLIPINT-LTKRKALFKARFEQAL 264
Query: 368 DKQ 370
D Q
Sbjct: 265 DSQ 267
>gi|125550822|gb|EAY96531.1| hypothetical protein OsI_18436 [Oryza sativa Indica Group]
Length = 560
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 614 EAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLK-------PAERQADPESITD 666
+ E+RR L +KL R L RA++ ++ + + LK PA R DPE +T
Sbjct: 88 QRELRRAVKLRKKLMTDDERLIYSLRRAKKKVALLLQKLKKYELPDLPAPRH-DPELLTA 146
Query: 667 EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALA 726
E+ ++K+G R + ++ +G RGVF G V+NMH+HWK+ E V++ ++ K++A
Sbjct: 147 EQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAM 206
Query: 727 LEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
L SGG+++++ ++++RG++Y++P L P N LTKRKAL ++ Q E+
Sbjct: 207 LTRLSGGIVINIHNTK---TIIMFRGRNYRQPKNLIPLNTLTKRKALFKARFEQALESQK 263
Query: 787 KHVATLESNAGR 798
++ +E+ R
Sbjct: 264 LNIKKIETQLRR 275
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 288 IHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGT-AVSLYRGVSYEVPS- 345
+H WK E V++ + P +K M +L R +GG+VI T + ++RG +Y P
Sbjct: 178 MHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKN 237
Query: 346 -VQLNKRIYKRNELPASSVSQATDKQ 370
+ LN + KR L + QA + Q
Sbjct: 238 LIPLNT-LTKRKALFKARFEQALESQ 262
>gi|51038196|gb|AAT93999.1| unknow protein [Oryza sativa Japonica Group]
gi|222630175|gb|EEE62307.1| hypothetical protein OsJ_17096 [Oryza sativa Japonica Group]
Length = 560
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 614 EAEVRRHAYLVQKLEKKLARAERKLLRAERALSKVEESLK-------PAERQADPESITD 666
+ E+RR L +KL R L RA++ ++ + + LK PA R DPE +T
Sbjct: 88 QRELRRAVKLRKKLMTDDERLIYSLRRAKKKVALLLQKLKKYELPDLPAPRH-DPELLTA 146
Query: 667 EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALA 726
E+ ++K+G R + ++ +G RGVF G V+NMH+HWK+ E V++ ++ K++A
Sbjct: 147 EQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAM 206
Query: 727 LEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALL 786
L SGG+++++ ++++RG++Y++P L P N LTKRKAL ++ Q E+
Sbjct: 207 LTRLSGGIVINIHNTK---TIIMFRGRNYRQPKNLIPLNTLTKRKALFKARFEQALESQK 263
Query: 787 KHVATLESNAGR 798
++ +E+ R
Sbjct: 264 LNIKKIETQLRR 275
>gi|255560940|ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
gi|223539382|gb|EEF40973.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K E P DPE T E+ ++K+G R + ++
Sbjct: 114 ERLIYNLKRAKKKVALLLQKLKKYELPELPPPLH-DPELFTSEQLQAYKKIGFRNRNYVP 172
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMHLHWK+ E V++ ++ K++A L SGG+++++ +
Sbjct: 173 VGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINIHNVK-- 230
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 799
++++RG++Y++P L P N LTKRKAL ++ Q E+ ++ +E R+
Sbjct: 231 -TIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 284
>gi|413917671|gb|AFW57603.1| hypothetical protein ZEAMMB73_144408 [Zea mays]
Length = 520
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 14/186 (7%)
Query: 616 EVRRHAYLVQKL----EK---KLARAERKLLRAERALSKVEESLKPAERQADPESITDEE 668
E+RR L +KL EK L RA++K+ + L K E A R DPE +T E+
Sbjct: 82 ELRRAVKLRKKLMTEDEKFIYNLRRAKKKVALLLQKLKKYELPDLQAPRH-DPELLTAEQ 140
Query: 669 RFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALE 728
++K+G R + ++ +G RGVF G V+NMH+HWK+ E V++ ++ K++A L
Sbjct: 141 LQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLT 200
Query: 729 AESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARS---IELQRQEAL 785
SGG+++++ ++++RG++Y++P L P N LTKRKAL ++ L+ Q+
Sbjct: 201 RLSGGIVINIHNTK---TIIMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQALESQKLN 257
Query: 786 LKHVAT 791
+K + T
Sbjct: 258 IKKIET 263
>gi|15232195|ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|11994182|dbj|BAB01285.1| unnamed protein product [Arabidopsis thaliana]
gi|332643815|gb|AEE77336.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 491
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K + P+ DPE T E+ F+K+G + K ++
Sbjct: 54 ERLIYNLKRAKKKVALLLQKLKKYDLPELPSPVH-DPELFTSEQVQAFKKIGFKNKNYVP 112
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMH+HWK+ E V++ ++ K++A + SGGV++++ +
Sbjct: 113 VGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVK-- 170
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKAL 773
++++RG++Y++P L P N LTKRKAL
Sbjct: 171 -TIIMFRGRNYRQPKNLIPVNTLTKRKAL 198
>gi|224055583|ref|XP_002298551.1| predicted protein [Populus trichocarpa]
gi|222845809|gb|EEE83356.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Query: 625 QKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLL 684
++L L RA++K+ + L K + P+ DPE +T E+ ++K+G R K ++
Sbjct: 43 ERLIYNLKRAKKKVALLLQKLKKYDLPELPSPLH-DPELLTPEQLQAYKKIGFRNKNYVP 101
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKG 744
+G RGVF G V+NMH+HWK+ E V++ ++ K++A + SGG++V+V +
Sbjct: 102 VGVRGVFGGVVQNMHMHWKFHETVQVSCDNFPKEKIKEMATMIARLSGGIVVNVHNVK-- 159
Query: 745 YAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 799
++++RG++Y++P L P N LTKRKAL ++ Q E+ ++ +E R+
Sbjct: 160 -TIIMFRGRNYRQPKDLIPLNTLTKRKALFKARFEQALESQKLNIKQIEQQLRRM 213
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 251 ELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNM 310
EL PE +L+ + + F+ K+ + G+ VV +H WK E V++ + P +
Sbjct: 79 ELLTPE-QLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVSCDNFPKEKI 137
Query: 311 KRMHEILERKTGGLVI-WRSGTAVSLYRGVSYEVPS--VQLNKRIYKRNELPASSVSQAT 367
K M ++ R +GG+V+ + + ++RG +Y P + LN + KR L + QA
Sbjct: 138 KEMATMIARLSGGIVVNVHNVKTIIMFRGRNYRQPKDLIPLNT-LTKRKALFKARFEQAL 196
Query: 368 D------KQIHKQI-SMSVNLE 382
+ KQI +Q+ M VN E
Sbjct: 197 ESQKLNIKQIEQQLRRMGVNPE 218
>gi|297818350|ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322896|gb|EFH53317.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 660 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQ 719
DPE T E+ F+K+G + K ++ +G RGVF G V+NMH+HWK+ E V++ ++
Sbjct: 88 DPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEK 147
Query: 720 AKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKAL 773
K++A + SGGV++++ + ++++RG++Y++P L P N LTKRKAL
Sbjct: 148 IKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNLIPVNTLTKRKAL 198
>gi|413918581|gb|AFW58513.1| hypothetical protein ZEAMMB73_947708, partial [Zea mays]
Length = 208
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
S+ S AEL LP ELRRL+ + + + + ++ AG+T+ +V+ IHE+W+ +E+V+L+ E
Sbjct: 133 SAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCE 192
Query: 304 GAPALNMKRMHEILE 318
A+NM+R HEILE
Sbjct: 193 DVWAMNMRRTHEILE 207
>gi|168040806|ref|XP_001772884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675795|gb|EDQ62286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L +E+R L + + + GLT +++++HE WK + ++K +G
Sbjct: 82 SREEILGAPLTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKG 141
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
P ++M + +LE KTGG +I R G AV L+RG +Y
Sbjct: 142 VPTVDMDNVCRVLEEKTGGKIILRQGGAVYLFRGRNY 178
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKISK 743
LGR G+ + +H HWK R + K+ K V T D + LE ++GG ++ + +
Sbjct: 112 LGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDM-DNVCRVLEEKTGGKII----LRQ 166
Query: 744 GYAMVVYRGKDY 755
G A+ ++RG++Y
Sbjct: 167 GGAVYLFRGRNY 178
>gi|242078343|ref|XP_002443940.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
gi|241940290|gb|EES13435.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
Length = 437
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WKT E VR+K G P ++M+ + LE KTGG++I
Sbjct: 180 RTKRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGVIIH 239
Query: 328 RSGTAVSLYRGVSY 341
R G+ + LYRG Y
Sbjct: 240 RHGSLLILYRGRHY 253
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 662 ESITDEER-FMFRKLGL-RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFD 718
E +T ER F+ K R K + LGR G+ + ++H +WK E V+I + V T D
Sbjct: 162 EPLTPAERAFLVDKCQKNRTKRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVD 221
Query: 719 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ + LE ++GGV++ G +++YRG+ Y
Sbjct: 222 M-QNVCHQLEDKTGGVIIH----RHGSLLILYRGRHY 253
>gi|194697426|gb|ACF82797.1| unknown [Zea mays]
Length = 611
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 201 RGGFSKESPLG--LGEEVGSDGEVKFPWEKRKEEVA-----EGRWLVKRRSSRTSLAELT 253
R G +PLG + V + G + E+RK ++A +GR SR +
Sbjct: 181 RRGVRLHTPLGQETPQTVSAHGIMMEVRERRKMDLARVSPGDGR-------SREEVLGEP 233
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L SE+R L + I GLT ++++IH W+ EI +++ G P ++MK +
Sbjct: 234 LTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNL 293
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSYE 342
LE K+GG VI R G V LYRG Y+
Sbjct: 294 CYHLEEKSGGKVIHRVGGVVFLYRGRHYD 322
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T E K + L +GR G+ +E +H HW+ +E+ K+ + V T D
Sbjct: 232 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM- 290
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRK 771
K + LE +SGG ++ G + +YRG+ Y P T RP+ L RK
Sbjct: 291 KNLCYHLEEKSGGKVIH----RVGGVVFLYRGRHYD-PKT-RPRYPLMLRK 335
>gi|226508160|ref|NP_001140244.1| uncharacterized protein LOC100272285 [Zea mays]
gi|194698680|gb|ACF83424.1| unknown [Zea mays]
gi|413917198|gb|AFW57130.1| hypothetical protein ZEAMMB73_054545 [Zea mays]
Length = 424
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + G T ++ +H WKT E VR+K G P ++M+ + LE KTGGL+I
Sbjct: 181 RTKRQINLGRDGFTHNMLSDVHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGLIIH 240
Query: 328 RSGTAVSLYRGVSY 341
R G+ + LYRG Y
Sbjct: 241 RHGSLLILYRGRHY 254
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 678 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQAKKIALALEAESGGVLV 736
R K + LGR G + ++H +WK E V+I + V T D + + LE ++GG+++
Sbjct: 181 RTKRQINLGRDGFTHNMLSDVHNNWKTCEAVRIKCLGVPTVDM-QNVCHQLEDKTGGLII 239
Query: 737 SVDKISKGYAMVVYRGKDY 755
G +++YRG+ Y
Sbjct: 240 H----RHGSLLILYRGRHY 254
>gi|162464008|ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic precursor [Zea mays]
gi|75147311|sp|Q84N48.1|CAF2P_MAIZE RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|30349369|gb|AAP22136.1| CRS2-associated factor 2 [Zea mays]
gi|414877310|tpg|DAA54441.1| TPA: crs2 associated factor2 [Zea mays]
Length = 611
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 201 RGGFSKESPLG--LGEEVGSDGEVKFPWEKRKEEVA-----EGRWLVKRRSSRTSLAELT 253
R G +PLG + V + G + E+RK ++A +GR SR +
Sbjct: 181 RRGVRLHTPLGQETPQTVSAHGIMMEVRERRKMDLARVSPGDGR-------SREEVLGEP 233
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L SE+R L + I GLT ++++IH W+ EI +++ G P ++MK +
Sbjct: 234 LTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNL 293
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSYE 342
LE K+GG VI R G V LYRG Y+
Sbjct: 294 CYHLEEKSGGKVIHRVGGVVFLYRGRHYD 322
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T E K + L +GR G+ +E +H HW+ +E+ K+ + V T D
Sbjct: 232 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM- 290
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
K + LE +SGG ++ G + +YRG+ Y
Sbjct: 291 KNLCYHLEEKSGGKVIH----RVGGVVFLYRGRHY 321
>gi|449432211|ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus]
gi|449480099|ref|XP_004155799.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 206 KESPLGLG----EEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRR 261
K SP G G E G P E + + R KRR R ++ LP +E +
Sbjct: 101 KYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKA 160
Query: 262 LRNLTFQTKSKTRIKGA--GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILER 319
L + K+K +I GLT +++ IH W+ E VR+K G P ++MK + LE
Sbjct: 161 LVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLED 220
Query: 320 KTGGLVIWRSGTAVSLYRGVSY 341
KT G +I R G + LYRG +Y
Sbjct: 221 KTFGKIIHRHGGFLVLYRGRNY 242
>gi|302766798|ref|XP_002966819.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
gi|300164810|gb|EFJ31418.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
Length = 672
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQA 720
E +++ E + ++G + + F +G+RG++ G + N+H +WK+ E V+I + + ++
Sbjct: 123 EPLSEGEAAHYARIGNKNQNFASVGKRGIYGGVIHNIHTNWKFHETVRIKCPRHNSMEET 182
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRPSTLRPKNL 766
++I L SGG+++ V + ++++RGK+YQ P L P L
Sbjct: 183 RRIGAELARLSGGIVLDV---LEDRTVIMFRGKNYQTPEELYPPTL 225
>gi|357144801|ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK E VR+K G P ++M+ + LE KTGGL+I
Sbjct: 174 RTKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVDMQNVCHELEDKTGGLIIH 233
Query: 328 RSGTAVSLYRGVSYE 342
R G + LYRG Y
Sbjct: 234 RHGGQLILYRGRHYH 248
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 662 ESITDEER-FMFRKLGL-RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFD 718
E +T ER F+ K R K + LGR G+ + ++H HWK+ E V++ + V T D
Sbjct: 156 EPLTPAERTFVVDKCQRNRTKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVD 215
Query: 719 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
+ + LE ++GG+++ G +++YRG+ Y
Sbjct: 216 M-QNVCHELEDKTGGLIIH----RHGGQLILYRGRHYH 248
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L K E + P + E +T E RK GL + L + G + V + +
Sbjct: 259 LWKPAEPIYPRLIKTTIEGLTVVETKAMRKKGLHVPVLTKLAKNGYYASLVPMVRDAFLT 318
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
ELV+I K +KI + L +LVS DK ++++RGKDY
Sbjct: 319 DELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDK----EQIIIWRGKDY 365
>gi|115475027|ref|NP_001061110.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|75133775|sp|Q6Z4U2.1|CAF1M_ORYSJ RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|40253285|dbj|BAD05220.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|40253602|dbj|BAD05547.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113623079|dbj|BAF23024.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|125560323|gb|EAZ05771.1| hypothetical protein OsI_28005 [Oryza sativa Indica Group]
Length = 428
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK E VR+K G P ++M+ + LE KTGGL+I
Sbjct: 173 RTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIH 232
Query: 328 RSGTAVSLYRGVSY 341
R G + LYRG Y
Sbjct: 233 RHGGQLILYRGRHY 246
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 662 ESITDEER-FMFRKL-GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFD 718
E +T ER F+ K R K + LGR G+ + ++H HWK E V++ + V T D
Sbjct: 155 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 214
Query: 719 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ + LE ++GG+++ G +++YRG+ Y
Sbjct: 215 M-QNVCHQLEDKTGGLIIH----RHGGQLILYRGRHY 246
>gi|125602364|gb|EAZ41689.1| hypothetical protein OsJ_26223 [Oryza sativa Japonica Group]
Length = 615
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK E VR+K G P ++M+ + LE KTGGL+I
Sbjct: 149 RTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIH 208
Query: 328 RSGTAVSLYRGVSY 341
R G + LYRG Y
Sbjct: 209 RHGGQLILYRGRHY 222
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
GLT +++ IH WK E VR+K G P ++M+ + LE KTGGL+I R G + LYRG
Sbjct: 371 GLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRG 430
Query: 339 VSY 341
Y
Sbjct: 431 RHY 433
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 662 ESITDEER-FMFRKL-GLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFD 718
E +T ER F+ K R K + LGR G+ + ++H HWK E V++ + V T D
Sbjct: 131 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 190
Query: 719 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ + LE ++GG+++ G +++YRG+ Y
Sbjct: 191 M-QNVCHQLEDKTGGLIIH----RHGGQLILYRGRHY 222
>gi|242052829|ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
gi|241927535|gb|EES00680.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
Length = 614
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 243 RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKI 302
RS L E P SE+R L + I GLT ++++IH W+ EI +++
Sbjct: 226 RSREEVLGEPLTP-SEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRC 284
Query: 303 EGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
G P ++MK + LE K+GG VI R G V +YRG Y+
Sbjct: 285 RGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFVYRGRHYD 324
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T E K + L +GR G+ +E +H HW+ +E+ K+ + V T D
Sbjct: 234 EPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM- 292
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
K + LE +SGG ++ G + VYRG+ Y
Sbjct: 293 KNLCYHLEEKSGGKVIH----RVGGVVFVYRGRHY 323
>gi|225453847|ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 241 KRRSSRTSLAE-LTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVR 299
+RR +L E LT E ++ + +TK + + GLT +++ IH WK +E VR
Sbjct: 152 RRRMREKTLGEPLTAAERKILVEKCQRHRTKRQINLGRDGLTHNMLNDIHNHWKHAEAVR 211
Query: 300 LKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
+K G P ++MK + LE KT G VI R G + LYRG +Y
Sbjct: 212 IKCMGVPTVDMKNVCTQLEDKTSGKVIHRQGGLLVLYRGRNY 253
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 678 RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQAKKIALALEAESGGVLV 736
R K + LGR G+ + ++H HWK+ E V+I + V T D K + LE ++ G ++
Sbjct: 180 RTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDM-KNVCTQLEDKTSGKVI 238
Query: 737 SVDKISKGYAMVVYRGKDYQ 756
+G +V+YRG++Y
Sbjct: 239 H----RQGGLLVLYRGRNYH 254
>gi|225425575|ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G++ V+ R+ L E L ++E+R L + + GLT ++++IH WK
Sbjct: 179 GKFPVEGRTREEILGE-PLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 237
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
+ +++ +G P ++M + LE KTGG +I R G V L+RG +Y
Sbjct: 238 RVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 283
>gi|222618317|gb|EEE54449.1| hypothetical protein OsJ_01538 [Oryza sativa Japonica Group]
Length = 587
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 243 RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKI 302
RS L E L +E+R L + I GLT ++++IH W+ EI +++
Sbjct: 200 RSREEVLGE-PLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRC 258
Query: 303 EGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
G P ++MK + LE K+GG VI R G V LYRG +Y
Sbjct: 259 RGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNY 297
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 683 LLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKI 741
L +GR G+ +E +H HW+ +E+ K+ + V T D K + LE +SGG ++
Sbjct: 229 LNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM-KNLCYHLEEKSGGKVIH---- 283
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLL 767
G + +YRG++Y P T RP+ L
Sbjct: 284 RVGGVVFLYRGRNYN-PRT-RPRYPL 307
>gi|115436276|ref|NP_001042896.1| Os01g0323300 [Oryza sativa Japonica Group]
gi|75115027|sp|Q657G7.1|CAF2P_ORYSJ RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|52075771|dbj|BAD44991.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|52076260|dbj|BAD45045.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|113532427|dbj|BAF04810.1| Os01g0323300 [Oryza sativa Japonica Group]
Length = 607
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 243 RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKI 302
RS L E L +E+R L + I GLT ++++IH W+ EI +++
Sbjct: 220 RSREEVLGE-PLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRC 278
Query: 303 EGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
G P ++MK + LE K+GG VI R G V LYRG +Y
Sbjct: 279 RGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNY 317
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 683 LLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKI 741
L +GR G+ +E +H HW+ +E+ K+ + V T D K + LE +SGG ++
Sbjct: 249 LNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM-KNLCYHLEEKSGGKVIH---- 303
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLL 767
G + +YRG++Y P T RP+ L
Sbjct: 304 RVGGVVFLYRGRNYN-PRT-RPRYPL 327
>gi|125525663|gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indica Group]
Length = 609
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 243 RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKI 302
RS L E L +E+R L + I GLT ++++IH W+ EI +++
Sbjct: 222 RSREEVLGE-PLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRC 280
Query: 303 EGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
G P ++MK + LE K+GG VI R G V LYRG +Y
Sbjct: 281 RGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNY 319
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 683 LLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVLVSVDKI 741
L +GR G+ +E +H HW+ +E+ K+ + V T D K + LE +SGG ++
Sbjct: 251 LNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM-KNLCYHLEEKSGGKVIH---- 305
Query: 742 SKGYAMVVYRGKDYQRPSTLRPKNLL 767
G + +YRG++Y P T RP+ L
Sbjct: 306 RVGGVVFLYRGRNYN-PRT-RPRYPL 329
>gi|356560247|ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
GLT ++++IH WK +E VR+K G P ++M + LE KT G VI+R G + LYRG
Sbjct: 186 GLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIFRHGGTLILYRG 245
Query: 339 VSY 341
+Y
Sbjct: 246 RNY 248
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISK 743
LGR G+ + +H HWK+ E V+I + V T D I LE ++ G ++
Sbjct: 182 LGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDM-NNICTQLEDKTFGKVI----FRH 236
Query: 744 GYAMVVYRGKDY 755
G +++YRG++Y
Sbjct: 237 GGTLILYRGRNY 248
>gi|326525102|dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK E VR+K G P ++M+ + LE KTGGL+I
Sbjct: 179 RTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVDMQNVCHELEDKTGGLIIH 238
Query: 328 RSGTAVSLYRGVSYE 342
R G + LYRG Y
Sbjct: 239 RHGGQLILYRGRHYH 253
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 662 ESITDEER-FMFRKLGL-RMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFD 718
E +T ER F+ K R K + LGR G+ + ++H HWK+ E V++ + V T D
Sbjct: 161 EPLTPAERSFLVEKCQKNRTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVD 220
Query: 719 QAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
+ + LE ++GG+++ G +++YRG+ Y
Sbjct: 221 M-QNVCHELEDKTGGLIIH----RHGGQLILYRGRHYH 253
>gi|357132021|ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like
[Brachypodium distachyon]
Length = 607
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L +E+R L + I GLT ++++IH W+ EI +++ G P ++MK +
Sbjct: 233 LTPAEVRALVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNL 292
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSY 341
LE K+GG VI R G V LYRG +Y
Sbjct: 293 CYHLEEKSGGKVIHRVGGVVFLYRGRNY 320
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T E K + L +GR G+ +E +H HW+ +E+ K+ + V T D
Sbjct: 231 EPLTPAEVRALVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM- 289
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
K + LE +SGG ++ G + +YRG++Y
Sbjct: 290 KNLCYHLEEKSGGKVIH----RVGGVVFLYRGRNY 320
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L K + P Q PE +T EE R G + L + G++ V+++ ++
Sbjct: 332 LWKPATPVYPKLIQLAPEGLTIEEAAEMRIRGQNLLPIFKLAKNGIYLNLVKDVRDAFEG 391
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD----YQRPST 760
+LVKI + KKI L +L+S D +++YRGK+ Y +P T
Sbjct: 392 NDLVKINCEGLEPSDYKKIGAKLRDLVPCILLSFD----NEQILIYRGKEWKSRYSKPLT 447
Query: 761 LRPK 764
L PK
Sbjct: 448 LIPK 451
>gi|242080803|ref|XP_002445170.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
gi|241941520|gb|EES14665.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
Length = 353
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG VI+RS + LYR
Sbjct: 171 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRSINIIILYR 230
Query: 338 GVSYE 342
G +Y+
Sbjct: 231 GRNYD 235
>gi|143955290|sp|Q0J7J7.2|CAF2M_ORYSJ RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|222640037|gb|EEE68169.1| hypothetical protein OsJ_26288 [Oryza sativa Japonica Group]
Length = 366
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRL--RNLTFQTKSKTRIKG 277
G + PW+ A G +SR + L E E+ +L R + +
Sbjct: 111 GRLDRPWDGVAAAAARGEGAGAAATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGK 170
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG VI+R+ + LYR
Sbjct: 171 GGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYR 230
Query: 338 GVSYE 342
G +Y+
Sbjct: 231 GRNYD 235
>gi|297739073|emb|CBI28562.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G++ V+ R+ L E L ++E+R L + + GLT ++++IH WK
Sbjct: 46 GKFPVEGRTREEILGE-PLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 104
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
+ ++ +G P ++M + LE KTGG +I R G V L+RG +Y
Sbjct: 105 RVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 150
>gi|115475115|ref|NP_001061154.1| Os08g0188000 [Oryza sativa Japonica Group]
gi|113623123|dbj|BAF23068.1| Os08g0188000, partial [Oryza sativa Japonica Group]
Length = 361
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRL--RNLTFQTKSKTRIKG 277
G + PW+ A G +SR + L E E+ +L R + +
Sbjct: 106 GRLDRPWDGVAAAAARGEGAGAAATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGK 165
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG VI+R+ + LYR
Sbjct: 166 GGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYR 225
Query: 338 GVSYE 342
G +Y+
Sbjct: 226 GRNYD 230
>gi|218200589|gb|EEC83016.1| hypothetical protein OsI_28075 [Oryza sativa Indica Group]
Length = 365
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRL--RNLTFQTKSKTRIKG 277
G + PW+ A G +SR + L E E+ +L R + +
Sbjct: 110 GRLDRPWDGVAAAAARGEGAGAAATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGK 169
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG VI+R+ + LYR
Sbjct: 170 GGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYR 229
Query: 338 GVSYE 342
G +Y+
Sbjct: 230 GRNYD 234
>gi|359473240|ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G++ V+ R+ L E L ++E+R L + + GLT ++++IH WK
Sbjct: 179 GKFPVEGRTREEILGE-PLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 237
Query: 296 EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
+ ++ +G P ++M + LE KTGG +I R G V L+RG +Y
Sbjct: 238 RVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 283
>gi|168014860|ref|XP_001759969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688719|gb|EDQ75094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 297
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 208 SPLGLGEEV----GSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLR 263
PLG E V G +G + PW ++ V EG L + SR + L + E+R L
Sbjct: 44 PPLGFREPVYSPFGPEGMAR-PWTGKQPNV-EGPKLGR---SREEILGEPLTKDEVRELV 98
Query: 264 NLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGG 323
+ + + GLT +++++H WK + R+K G P ++M + ++E K+GG
Sbjct: 99 GRACAERRRLDLGKDGLTHNMLELLHRHWKRRRVCRIKCYGVPTVDMDNLCRVIEEKSGG 158
Query: 324 LVIWRSGTAVSLYRGVSY 341
+I RS + ++RG +Y
Sbjct: 159 KIIRRSQGMLYVFRGRNY 176
>gi|168045030|ref|XP_001774982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673729|gb|EDQ60248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
G T ++ +H+ WK ++VR+K +G P ++M + +LE KTGG +I R+G V L+RG
Sbjct: 116 GFTHNMLASVHDYWKRRQVVRIKCKGVPTVDMDNVCTVLEDKTGGKIISRAGGVVYLFRG 175
Query: 339 VSY 341
+Y
Sbjct: 176 RNY 178
>gi|297802930|ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGA--GLTQAVVDIIHEKWKTSEIV 298
KRR R + +L E+E + L L + K+K ++ GLT +++ I+ WK +E V
Sbjct: 147 KRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDIYNHWKHAEAV 206
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
R+K G P L+MK + LE KT G V+ + + LYRG +Y+
Sbjct: 207 RVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHCGTLVLYRGRNYD 250
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 647 KVEESLKPAERQADPESITDEERFMFRKLGLRMKAF--LLLGRRGVFDGTVENMHLHWKY 704
K+EE + + S+T+ ER +L R K + LGR G+ + +++ HWK+
Sbjct: 143 KLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDIYNHWKH 202
Query: 705 RELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
E V++ + V T D K + LE ++ G +VS +V+YRG++Y
Sbjct: 203 AEAVRVKCLGVPTLDM-KNVIFHLEDKTFGQVVS----KHCGTLVLYRGRNY 249
>gi|22329043|ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|18176015|gb|AAL59968.1| unknown protein [Arabidopsis thaliana]
gi|20465409|gb|AAM20129.1| unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 405
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGA--GLTQAVVDIIHEKWKTSEIV 298
KRR R + +L E+E + L L + K+K ++ GLT +++ ++ WK +E V
Sbjct: 146 KRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAV 205
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
R+K G P L+MK + LE KT G V+ + + LYRG +Y+
Sbjct: 206 RVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYD 249
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 647 KVEESLKPAERQADPESITDEERFMFRKLGLRMKAF--LLLGRRGVFDGTVENMHLHWKY 704
K+EE + + S+T+ ER +L R K + LGR G+ + +++ HWK+
Sbjct: 142 KLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKH 201
Query: 705 RELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
E V++ + V T D K + LE ++ G +VS +V+YRG++Y
Sbjct: 202 AEAVRVKCLGVPTLDM-KNVIFHLEDKTFGQVVS----KHSGTLVLYRGRNY 248
>gi|225445140|ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L E E++ L ++K + + GLT ++D IH WK + ++K +G
Sbjct: 235 SREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 294
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE KTGG VI+ G + L+RG +Y
Sbjct: 295 VCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T+EE + ++ K L +GR G+ ++N+H HWK R + KI K V T D
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDM- 300
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
+ LE ++GG ++ KG + ++RG++Y
Sbjct: 301 DNVRQQLEEKTGGKVI----YGKGGVLFLFRGRNYN 332
>gi|297738777|emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L E E++ L ++K + + GLT ++D IH WK + ++K +G
Sbjct: 235 SREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 294
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE KTGG VI+ G + L+RG +Y
Sbjct: 295 VCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T+EE + ++ K L +GR G+ ++N+H HWK R + KI K V T D
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDM- 300
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
+ LE ++GG ++ KG + ++RG++Y
Sbjct: 301 DNVRQQLEEKTGGKVI----YGKGGVLFLFRGRNYN 332
>gi|225461009|ref|XP_002278505.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Vitis
vinifera]
Length = 452
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M+ + LE K GG +I+R+ + LYR
Sbjct: 174 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNINIILLYR 233
Query: 338 GVSYE 342
G +Y+
Sbjct: 234 GRNYD 238
>gi|297737420|emb|CBI26621.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M+ + LE K GG +I+R+ + LYR
Sbjct: 155 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNINIILLYR 214
Query: 338 GVSYE 342
G +Y+
Sbjct: 215 GRNYD 219
>gi|2980765|emb|CAA18192.1| hypothetical protein [Arabidopsis thaliana]
gi|7270003|emb|CAB79819.1| hypothetical protein [Arabidopsis thaliana]
Length = 392
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGA--GLTQAVVDIIHEKWKTSEIV 298
KRR R + +L E+E + L L + K+K ++ GLT +++ ++ WK +E V
Sbjct: 146 KRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAV 205
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
R+K G P L+MK + LE KT G V+ + + LYRG +Y+
Sbjct: 206 RVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYD 249
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 647 KVEESLKPAERQADPESITDEERFMFRKLGLRMKAF--LLLGRRGVFDGTVENMHLHWKY 704
K+EE + + S+T+ ER +L R K + LGR G+ + +++ HWK+
Sbjct: 142 KLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKH 201
Query: 705 RELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
E V++ + V T D K + LE ++ G +VS +V+YRG++Y
Sbjct: 202 AEAVRVKCLGVPTLDM-KNVIFHLEDKTFGQVVS----KHSGTLVLYRGRNY 248
>gi|297836246|ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
gi|297331845|gb|EFH62264.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
Length = 700
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L + E+R L +T + + GLT +++ IH+ WK + ++K +G ++M ++
Sbjct: 243 LTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDKV 302
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSY 341
E LE K GG VI+R G + L+RG +Y
Sbjct: 303 CEQLEEKIGGKVIYRRGGVLFLFRGRNY 330
>gi|15240416|ref|NP_200300.1| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75170294|sp|Q9FFU1.1|CAF2M_ARATH RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|9758269|dbj|BAB08768.1| unnamed protein product [Arabidopsis thaliana]
gi|332009170|gb|AED96553.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 358
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE K+GG +++R+ + LYR
Sbjct: 169 GGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYR 228
Query: 338 GVSYE 342
G +Y+
Sbjct: 229 GRNYD 233
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISK 743
LG+ GV ++++H HWK E V+I + V T D I LE +SGG +V
Sbjct: 166 LGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDM-DNICFHLEEKSGGKIVY----RN 220
Query: 744 GYAMVVYRGKDY 755
+V+YRG++Y
Sbjct: 221 INILVLYRGRNY 232
>gi|413921149|gb|AFW61081.1| hypothetical protein ZEAMMB73_173916 [Zea mays]
Length = 291
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG V+ RS + LYR
Sbjct: 167 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSINIIILYR 226
Query: 338 GVSYE 342
G +Y+
Sbjct: 227 GRNYD 231
>gi|226530577|ref|NP_001147995.1| LOC100281604 [Zea mays]
gi|195615022|gb|ACG29341.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG V+ RS + LYR
Sbjct: 167 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSINIIILYR 226
Query: 338 GVSYE 342
G +Y+
Sbjct: 227 GRNYD 231
>gi|14596153|gb|AAK68804.1| Unknown protein [Arabidopsis thaliana]
Length = 284
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGA--GLTQAVVDIIHEKWKTSEIV 298
KRR R + +L E+E + L L + K+K ++ GLT +++ ++ WK +E V
Sbjct: 146 KRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAV 205
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
R+K G P L+MK + LE KT G V+ + + LYRG +Y+
Sbjct: 206 RVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYD 249
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 647 KVEESLKPAERQADPESITDEERFMFRKLGLRMKAF--LLLGRRGVFDGTVENMHLHWKY 704
K+EE + + S+T+ ER +L R K + LGR G+ + +++ HWK+
Sbjct: 142 KLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKH 201
Query: 705 RELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
E V++ + V T D K + LE ++ G +VS +V+YRG++Y
Sbjct: 202 AEAVRVKCLGVPTLDM-KNVIFHLEDKTFGQVVS----KHSGTLVLYRGRNY 248
>gi|297792957|ref|XP_002864363.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
gi|297310198|gb|EFH40622.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE K+GG +++R + LYR
Sbjct: 165 GGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRHINILVLYR 224
Query: 338 GVSYE 342
G +Y+
Sbjct: 225 GRNYD 229
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 685 LGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISK 743
LG+ GV ++++H HWK E V+I + V T D I LE +SGG +V
Sbjct: 162 LGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDM-DNICFHLEEKSGGKIV----YRH 216
Query: 744 GYAMVVYRGKDY 755
+V+YRG++Y
Sbjct: 217 INILVLYRGRNY 228
>gi|224113759|ref|XP_002332503.1| predicted protein [Populus trichocarpa]
gi|222832483|gb|EEE70960.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L + E++ L + + K + + GLT ++D IH WK + ++K +G ++M +
Sbjct: 248 LTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 307
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSY 341
+ LE +TGG +I+R G + L+RG +Y
Sbjct: 308 CQQLEERTGGKIIYRKGGVLYLFRGRNY 335
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 677 LRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQAKKIALALEAESGGVL 735
L+ K L +GR G+ ++N+H HWK R + KI K V T D + LE +GG +
Sbjct: 261 LKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDM-DNVCQQLEERTGGKI 319
Query: 736 VSVDKISKGYAMVVYRGKDY 755
+ KG + ++RG++Y
Sbjct: 320 I----YRKGGVLYLFRGRNY 335
>gi|238014734|gb|ACR38402.1| unknown [Zea mays]
gi|413921148|gb|AFW61080.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE KTGG V+ RS + LYR
Sbjct: 167 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSINIIILYR 226
Query: 338 GVSYE 342
G +Y+
Sbjct: 227 GRNYD 231
>gi|42573097|ref|NP_974645.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|332660445|gb|AEE85845.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 341
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 241 KRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGA--GLTQAVVDIIHEKWKTSEIV 298
KRR R + +L E+E + L L + K+K ++ GLT +++ ++ WK +E V
Sbjct: 146 KRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAV 205
Query: 299 RLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
R+K G P L+MK + LE KT G V+ + + LYRG +Y+
Sbjct: 206 RVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYD 249
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 647 KVEESLKPAERQADPESITDEERFMFRKLGLRMKA--FLLLGRRGVFDGTVENMHLHWKY 704
K+EE + + S+T+ ER +L R K + LGR G+ + +++ HWK+
Sbjct: 142 KLEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKH 201
Query: 705 RELVKI-IVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
E V++ + V T D K + LE ++ G +VS +V+YRG++Y
Sbjct: 202 AEAVRVKCLGVPTLDM-KNVIFHLEDKTFGQVVS----KHSGTLVLYRGRNY 248
>gi|302763677|ref|XP_002965260.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
gi|302809791|ref|XP_002986588.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300145771|gb|EFJ12445.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300167493|gb|EFJ34098.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
Length = 366
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 272 KTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGT 331
+ I GLT ++D+IH WK +++L+ +G P ++M + +E KTGG +I R G
Sbjct: 112 QVNIGKDGLTHNMLDLIHCHWKRRRVIKLRCKGVPTIDMDNVCFHIEDKTGGKIIQRHGG 171
Query: 332 AVSLYRGVSY 341
++ L+RG +Y
Sbjct: 172 SIYLFRGRNY 181
>gi|449468496|ref|XP_004151957.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
gi|449489970|ref|XP_004158472.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
Length = 358
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE K+GG +I+R + LYR
Sbjct: 170 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYR 229
Query: 338 GVSYE 342
G +Y+
Sbjct: 230 GRNYD 234
>gi|224124340|ref|XP_002319307.1| predicted protein [Populus trichocarpa]
gi|222857683|gb|EEE95230.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE K+GG V++R+ + LYR
Sbjct: 165 GGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVVYRNINILLLYR 224
Query: 338 GVSYE 342
G +Y+
Sbjct: 225 GRNYD 229
>gi|326525845|dbj|BAJ93099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 607
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 243 RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKI 302
RS L E L +E R L + I GLT ++++IH W+ E+ +++
Sbjct: 222 RSREEVLGE-PLTSAETRELVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEVCKVRC 280
Query: 303 EGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASS 362
G P ++M + LE K+GG VI R G V LYRG +Y N R R L
Sbjct: 281 RGVPTVDMNNLCYHLEEKSGGKVIKRVGGVVFLYRGRNY-------NPRTRPRYPLMLWK 333
Query: 363 VSQATDKQIHKQISMSVNLETASE 386
+ ++ +Q + +E A+E
Sbjct: 334 PATPVYPKLIQQAPEGLTVEEAAE 357
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L K + P Q PE +T EE R+ G + L L + G++ V+++ ++
Sbjct: 331 LWKPATPVYPKLIQQAPEGLTVEEAAEMRRRGQILLPILKLAKNGIYINLVKDVQDAFEG 390
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD----YQRPST 760
+LVKI K KKI L VL+S DK +++YRGK Y +P T
Sbjct: 391 NDLVKIDCKGLEPSDYKKIGAKLRDLVPCVLLSFDK----EQILIYRGKGWKSRYLKPLT 446
Query: 761 LRPK 764
PK
Sbjct: 447 PFPK 450
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T E K + L +GR G+ +E +H HW+ +E+ K+ + V T D
Sbjct: 230 EPLTSAETRELVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDM- 288
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE +SGG ++ G + +YRG++Y
Sbjct: 289 NNLCYHLEEKSGGKVIK----RVGGVVFLYRGRNY 319
>gi|297604874|ref|NP_001056251.2| Os05g0551900 [Oryza sativa Japonica Group]
gi|255676553|dbj|BAF18165.2| Os05g0551900, partial [Oryza sativa Japonica Group]
Length = 73
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 473 GRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDIKKLT 519
GR+R QGLA A++KLWEKS + KIA+KRG+Q T ++ M E+IK T
Sbjct: 1 GRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKVWT 47
>gi|255563935|ref|XP_002522967.1| conserved hypothetical protein [Ricinus communis]
gi|223537779|gb|EEF39397.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++D IH WK +E VR+K G P L+M + LE K+GG +I+R + LYR
Sbjct: 211 GGVTHNMLDDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKIIYRHINILLLYR 270
Query: 338 GVSYE 342
G +Y+
Sbjct: 271 GRNYD 275
>gi|317106625|dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK +E VR+K G P ++MK + LE KT G +I
Sbjct: 178 KTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIH 237
Query: 328 RSGTAVSLYRGVSY 341
R ++ LYRG +Y
Sbjct: 238 RHCGSLVLYRGRNY 251
>gi|22329751|ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4 [Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27 [Arabidopsis thaliana]
gi|17065312|gb|AAL32810.1| Unknown protein [Arabidopsis thaliana]
gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis thaliana]
gi|332192262|gb|AEE30383.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 564
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
G T ++++IH WK + +++ +G P ++M + +LE KTGG +I R G V L+RG
Sbjct: 228 GFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRG 287
Query: 339 VSY 341
+Y
Sbjct: 288 RNY 290
>gi|356530475|ref|XP_003533806.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 388
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++ IH WK +E+VR+K G P L+M + LE K+GG VI+R+ + LYR
Sbjct: 168 GGVTHNMLGDIHNHWKKAEVVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNINILLLYR 227
Query: 338 GVSYE 342
G +Y+
Sbjct: 228 GRNYD 232
>gi|255568848|ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
gi|223535358|gb|EEF37033.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 220 GEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAG 279
G+++F K EEV R ++ + +R + +L P R NL G
Sbjct: 170 GDLQF--GKFPEEVKSRREILGKPLTRWEIKQLVKPLLSDNRQVNLGRD----------G 217
Query: 280 LTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGV 339
LT ++++IH W+ S + +++ +G P ++M + LE +TGG +I+R G V L+ G
Sbjct: 218 LTHNMLELIHSHWRRSPVCKVRCKGIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGR 277
Query: 340 SYE 342
+Y+
Sbjct: 278 NYD 280
>gi|297850808|ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
gi|297339127|gb|EFH69544.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
G T ++++IH WK + +++ +G P ++M + +LE KTGG +I R G V L+RG
Sbjct: 230 GFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEIIHRVGGVVYLFRG 289
Query: 339 VSY 341
+Y
Sbjct: 290 RNY 292
>gi|255589857|ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis]
Length = 748
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L E++ L +T+ + + GLT ++D IH WK + ++K G
Sbjct: 243 SREEILGEPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMG 302
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE +TGG VI+R G V L+RG +Y
Sbjct: 303 VCTVDMDNVCQQLEERTGGKVIYRKGGVVYLFRGRNY 339
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQA 720
E +T EE + + L+ + L +GR G+ ++N+H HWK R + KI + V T D
Sbjct: 250 EPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDM- 308
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE +GG ++ KG + ++RG++Y
Sbjct: 309 DNVCQQLEERTGGKVI----YRKGGVVYLFRGRNY 339
>gi|18399222|ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis thaliana]
gi|20197570|gb|AAD24394.2| expressed protein [Arabidopsis thaliana]
gi|28393847|gb|AAO42331.1| unknown protein [Arabidopsis thaliana]
gi|330251862|gb|AEC06956.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 701
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L + E+R L +T + + GLT +++ IH+ WK + ++K +G ++M +
Sbjct: 243 LTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNV 302
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSY 341
E LE K GG VI+R G + L+RG +Y
Sbjct: 303 CEQLEEKIGGKVIYRRGGVLFLFRGRNY 330
>gi|218188278|gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group]
Length = 701
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
+SR + L + E+ L T +TK + I GLT +++ IH WK + ++K +
Sbjct: 175 ASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCK 234
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
G ++M + + LE K GG VI G + L+RG +Y
Sbjct: 235 GVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGRNY 272
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE K L+ K L +GR G+ +EN+H HWK + + KI K V T D
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDM- 241
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE + GG ++ +G + ++RG++Y
Sbjct: 242 DNVCQQLEEKVGGKVIH----HQGGVIFLFRGRNY 272
>gi|255541412|ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical protein [Ricinus communis]
Length = 411
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK +E VR+K G P ++MK + LE KT G +I
Sbjct: 173 KTKKQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIH 232
Query: 328 RSGTAVSLYRGVSY 341
R + LYRG +Y
Sbjct: 233 RHCGLLVLYRGRNY 246
>gi|147799432|emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]
Length = 393
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L E E++ L ++K + + GLT ++D IH WK + ++K +G
Sbjct: 235 SREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 294
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE KTGG VI+ G + L+RG +Y
Sbjct: 295 VCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T+EE + ++ K L +GR G+ ++N+H HWK R + KI K V T D
Sbjct: 242 EPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDM- 300
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE ++GG ++ KG + ++RG++Y
Sbjct: 301 DNVRQQLEEKTGGKVI----YGKGGVLFLFRGRNY 331
>gi|115436730|ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group]
Length = 701
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 244 SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 303
+SR + L + E+ L T +TK + I GLT +++ IH WK + ++K +
Sbjct: 175 ASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCK 234
Query: 304 GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
G ++M + + LE K GG VI G + L+RG +Y
Sbjct: 235 GVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRGRNY 272
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE K L+ K L +GR G+ +EN+H HWK + + KI K V T D
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDM- 241
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE + GG ++ +G + ++RG++Y
Sbjct: 242 DNVCQQLEEKVGGKVIH----HQGGVIFLFRGRNY 272
>gi|449478585|ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 603
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 258 ELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEIL 317
E+R L + + GLT ++++IH WK + +++ +G P ++M + +
Sbjct: 246 EIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHI 305
Query: 318 ERKTGGLVIWRSGTAVSLYRGVSY 341
E KTGG +I R G + L+RG +Y
Sbjct: 306 EEKTGGKIIHRVGGVLYLFRGRNY 329
>gi|224130086|ref|XP_002320749.1| predicted protein [Populus trichocarpa]
gi|222861522|gb|EEE99064.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 268 QTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIW 327
+TK + + GLT +++ IH WK E VR+K G P ++MK + LE KT G +I
Sbjct: 173 KTKKQINLGIDGLTHNMLNDIHNHWKHDEAVRVKCMGVPTVDMKNVCTQLEDKTFGKIIH 232
Query: 328 RSGTAVSLYRGVSY 341
R + LYRG +Y
Sbjct: 233 RHCGLLVLYRGRNY 246
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 645 LSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 704
L K E + P + + ++ EE RK GL + A L R G F V + +
Sbjct: 258 LWKPHEPVYPRLIKTTIDGLSIEETKEMRKRGLAVPALTKLSRNGYFGSLVPMVRDAFLV 317
Query: 705 RELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQRP 758
ELV+I + +KKI L +LV+ DK +VV+RGKDY+ P
Sbjct: 318 SELVRIDCQGLDRSDSKKIGCKLRDLVPCILVTFDK----EQIVVWRGKDYKPP 367
>gi|449434945|ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 602
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 258 ELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEIL 317
E+R L + + GLT ++++IH WK + +++ +G P ++M + +
Sbjct: 245 EIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHI 304
Query: 318 ERKTGGLVIWRSGTAVSLYRGVSY 341
E KTGG +I R G + L+RG +Y
Sbjct: 305 EEKTGGKIIHRVGGVLYLFRGRNY 328
>gi|224110940|ref|XP_002315689.1| predicted protein [Populus trichocarpa]
gi|222864729|gb|EEF01860.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
GLT +++++H WK + +++ +G P ++M + LE KTGG +I R G V L+RG
Sbjct: 167 GLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKIIHRVGGVVYLFRG 226
Query: 339 VSY 341
+Y
Sbjct: 227 RNY 229
>gi|356496030|ref|XP_003516873.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 358
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 278 AGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYR 337
G+T ++ IH WK +E VR+K G P L+M + LE K+GG VI+R+ + LYR
Sbjct: 168 GGVTHNMLGDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNINILLLYR 227
Query: 338 GVSYE 342
G +Y+
Sbjct: 228 GRNYD 232
>gi|307135966|gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 258 ELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEIL 317
E+R L + + GLT ++++IH WK + +++ +G P ++M + +
Sbjct: 246 EIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNICHHI 305
Query: 318 ERKTGGLVIWRSGTAVSLYRGVSY 341
E KTGG +I R G + L+RG +Y
Sbjct: 306 EEKTGGKIIHRVGGVLYLFRGRNY 329
>gi|356524038|ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine
max]
Length = 593
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 279 GLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRG 338
GLT ++++IH WK + +++ G P ++M + +E KTGG +I R G V L+RG
Sbjct: 222 GLTHNMLELIHSHWKRRRVCKIRCLGVPTVDMDNVCHHIEEKTGGKIIHRVGGVVYLFRG 281
Query: 339 VSY 341
+Y
Sbjct: 282 RNY 284
>gi|242082009|ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
Length = 674
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L + E+ L + +TK + + GLT +++ IH WK + ++K +G
Sbjct: 176 SREDILGEPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKG 235
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE K GG VI R G + L+RG +Y
Sbjct: 236 VCTVDMDNICQQLEEKVGGKVIHRQGGVIFLFRGRNY 272
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE F K L+ K L +GR G+ +EN+H HWK + + KI K V T D
Sbjct: 183 EPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDM- 241
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
I LE + GG ++ +G + ++RG++Y
Sbjct: 242 DNICQQLEEKVGGKVIH----RQGGVIFLFRGRNY 272
>gi|357520913|ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula]
Length = 698
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%)
Query: 254 LPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRM 313
L + E+ L T ++ + + G ++D IH WK + ++K G ++M +
Sbjct: 172 LTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNV 231
Query: 314 HEILERKTGGLVIWRSGTAVSLYRGVSY 341
+ LE KTGG VI+R G + L+RG +Y
Sbjct: 232 CQQLEEKTGGKVIYRRGGVIYLFRGRNY 259
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI-IVKVKTFDQA 720
E +T EE + L+ L LGR G ++N+H HWK R + KI + V T D
Sbjct: 170 EPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDM- 228
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
+ LE ++GG ++ +G + ++RG++Y
Sbjct: 229 DNVCQQLEEKTGGKVI----YRRGGVIYLFRGRNYN 260
>gi|449443167|ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
gi|449521361|ref|XP_004167698.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
Length = 745
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L + E++ L + + I GLT +++ IH WK + ++K +G
Sbjct: 243 SREEILGEPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKG 302
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE +TGG +I+ G A+ LYRG +Y
Sbjct: 303 VCTVDMDNVKQQLEERTGGKIIYSRGGALYLYRGRNY 339
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE + + L +GR G+ +EN+H WK R + KI K V T D
Sbjct: 250 EPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDM- 308
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE +GG ++ S+G A+ +YRG++Y
Sbjct: 309 DNVKQQLEERTGGKII----YSRGGALYLYRGRNY 339
>gi|194688996|gb|ACF78582.1| unknown [Zea mays]
gi|194700546|gb|ACF84357.1| unknown [Zea mays]
gi|223974875|gb|ACN31625.1| unknown [Zea mays]
Length = 560
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L + E+ L + ++K + + GLT +++ IH WK + ++K +G
Sbjct: 62 SREDILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKG 121
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + LE K GG VI R G + L+RG +Y
Sbjct: 122 VCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNY 158
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE K L+ K L +GR G+ +EN+H HWK + + KI K V T D
Sbjct: 69 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDM- 127
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 756
I LE + GG ++ +G + ++RG++Y
Sbjct: 128 DNICHQLEEKVGGKVIH----RQGGVIFLFRGRNYN 159
>gi|159469243|ref|XP_001692777.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278030|gb|EDP03796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 321
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 273 TRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKRMHEI---LERKTGGLVIWRS 329
R+ +GL +V+ + W+ SE+V+L+I M + ++ LE++TGGLV+WR+
Sbjct: 139 VRLGPSGLNASVLTSVASAWRNSELVKLRIVSRANKYMPYITQVCAALEQRTGGLVVWRA 198
Query: 330 GTAVSLYRGVSYEVPS 345
G ++ L+RG Y+ S
Sbjct: 199 GGSIWLFRGAGYDAAS 214
>gi|357144748|ref|XP_003573400.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like
[Brachypodium distachyon]
Length = 365
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 244 SSRTSLAELTLPESELRRL--RNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLK 301
+SR L L E+E+ L R + + G+T ++D IH WK +E VR+K
Sbjct: 134 TSREDLLGEALSEAEVSELVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIK 193
Query: 302 IEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
G L+M + LE KTGG +I RS + LYRG +Y+
Sbjct: 194 CLGVATLDMDNICFHLEDKTGGKIIHRSINILILYRGRNYD 234
>gi|162462028|ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays]
gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays]
Length = 674
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L + E+ L + ++K + + GLT +++ IH WK + ++K +G
Sbjct: 176 SREDILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKG 235
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + LE K GG VI R G + L+RG +Y
Sbjct: 236 VCTIDMDNICHQLEEKVGGKVIHRQGGVIFLFRGRNY 272
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE K L+ K L +GR G+ +EN+H HWK + + KI K V T D
Sbjct: 183 EPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDM- 241
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
I LE + GG ++ +G + ++RG++Y
Sbjct: 242 DNICHQLEEKVGGKVIH----RQGGVIFLFRGRNY 272
>gi|356527769|ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 723
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L + E+R L + + + I GLT ++D IH WK +++ +G
Sbjct: 192 SREEILGEPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKG 251
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + LE +TGG +I R G + L+RG +Y
Sbjct: 252 VCTVDMDNVCHQLEERTGGKIIHRKGGVLYLFRGRNY 288
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E +T EE K ++ + L +GR G+ ++N+H HWK R KI K V T D
Sbjct: 199 EPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDM- 257
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE +GG ++ KG + ++RG++Y
Sbjct: 258 DNVCHQLEERTGGKIIH----RKGGVLYLFRGRNY 288
>gi|357132246|ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like
[Brachypodium distachyon]
Length = 702
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + L + E+ L + K + I GLT +++ IH WK + ++K +G
Sbjct: 174 SREEVLGEPLSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKG 233
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
++M + + LE + GG VI R G V L+RG +Y
Sbjct: 234 VCTVDMDNVCQQLEERVGGKVIHRQGGVVFLFRGRNY 270
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 662 ESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK-VKTFDQA 720
E ++ EE K L+ K L +GR G+ +EN+H HWK + + KI K V T D
Sbjct: 181 EPLSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDM- 239
Query: 721 KKIALALEAESGGVLVSVDKISKGYAMVVYRGKDY 755
+ LE GG ++ +G + ++RG++Y
Sbjct: 240 DNVCQQLEERVGGKVIH----RQGGVVFLFRGRNY 270
>gi|356495236|ref|XP_003516485.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 705
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 230 KEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIH 289
+EEV R SR + L + E+ RL T ++ + I GLT +++ IH
Sbjct: 215 EEEVQPVRLAGPVWESRDEVLGEPLTKDEINRLIKATEKSSRQLNIGRDGLTHNMLENIH 274
Query: 290 EKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSY 341
W ++K G ++M + + LE +TGG +I+R V L+RG +Y
Sbjct: 275 TYWMRRSACKIKCRGVCTVDMDNVCQQLEERTGGKIIYRQAGTVYLFRGKNY 326
>gi|302759655|ref|XP_002963250.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
gi|300168518|gb|EFJ35121.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
Length = 274
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 660 DPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQ 719
DPE ++ E ++ + FL +G+RGV++G + +++ HW E ++I + +
Sbjct: 96 DPEYLSPEFMTALKERNRCIDDFLTIGKRGVWEGFIRDIYSHWINHETLRIYCEGYPLRK 155
Query: 720 AKKIALALEAESGGVLVSVDKISKGYAMVVYRGKD----YQRPSTLRPKNLLTKRKALAR 775
+ +A + SG V+++V + + + ++YRG++ YQ PS R +N+L K KAL +
Sbjct: 156 LRPMAEKVARMSGAVVIAVTEETMSF--ILYRGRNFSHGYQPPS--RIENMLNKGKALKK 211
Query: 776 SIELQRQEALLKHVATLES--NAGRLRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSE 833
++ L+ + L ++V L + RLR+ + E+ + L + + DDD E
Sbjct: 212 ALLLKSLQHLYRNVRELTERIHKHRLRAVYTEKQRKAIVEAEERGEDLQADASQSDDDEE 271
>gi|357443457|ref|XP_003592006.1| hypothetical protein MTR_1g097730 [Medicago truncatula]
gi|357443499|ref|XP_003592027.1| hypothetical protein MTR_1g097960 [Medicago truncatula]
gi|355481054|gb|AES62257.1| hypothetical protein MTR_1g097730 [Medicago truncatula]
gi|355481075|gb|AES62278.1| hypothetical protein MTR_1g097960 [Medicago truncatula]
Length = 56
Score = 47.4 bits (111), Expect = 0.035, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 401 EVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 454
E+ LLD LGPR+ D + D LP +VP Y+ F++LPY V S L+RK
Sbjct: 5 ELNLLLDELGPRFKDL-------ILLDQLPAVVPRYKTSFKLLPYEVNSCLSRK 51
>gi|356572588|ref|XP_003554450.1| PREDICTED: uncharacterized protein LOC100801865 [Glycine max]
Length = 70
Score = 46.2 bits (108), Expect = 0.082, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
Query: 466 LPPHFAL---GRSRQLQGLAVAMIKLWEKSSIAKI 497
+ PHFAL GR+R+LQGLA AM+K WE S+I K+
Sbjct: 1 MKPHFALANAGRNRELQGLARAMVKRWETSAIQKL 35
>gi|194704400|gb|ACF86284.1| unknown [Zea mays]
Length = 130
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 623 LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 682
+ + +E +L++A + +AE+ + ++E++ P + E+I+++ER+M RK+GL+MK F
Sbjct: 37 VAKDVETRLSQAIAEKAKAEKLIEELEKA-SPLSKAEVRETISEDERYMLRKVGLKMKQF 95
Query: 683 LLLG 686
LLLG
Sbjct: 96 LLLG 99
>gi|297603821|ref|NP_001054631.2| Os05g0145300 [Oryza sativa Japonica Group]
gi|255676015|dbj|BAF16545.2| Os05g0145300, partial [Oryza sativa Japonica Group]
Length = 92
Score = 44.3 bits (103), Expect = 0.30, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 634 AERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDG 693
A++K+ + L K E PA R DPE +T E+ ++K+G R + ++ +G RGVF G
Sbjct: 11 AKKKVALLLQKLKKYELPDLPAPRH-DPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGG 69
Query: 694 TVENMHLHWKYRELVKI 710
V+NMH+HWK+ E V++
Sbjct: 70 VVQNMHMHWKFHETVQV 86
>gi|408373090|ref|ZP_11170788.1| hypothetical protein A11A3_03384 [Alcanivorax hongdengensis A-11-3]
gi|407766928|gb|EKF75367.1| hypothetical protein A11A3_03384 [Alcanivorax hongdengensis A-11-3]
Length = 104
Score = 43.5 bits (101), Expect = 0.49, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 661 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQA 720
P S D +R R++G +KA L+ G +G+ D VE ++L + EL+K+ V +T D
Sbjct: 2 PLSNQDIKRL--RRIGHHLKAILIFGDKGLTDNFVEELNLRLEDHELIKVKVNAETRDDR 59
Query: 721 KKIALALEAESGGVLV 736
I AL +SG L+
Sbjct: 60 ADIVTALCQKSGAELI 75
>gi|388514061|gb|AFK45092.1| unknown [Lotus japonicus]
Length = 161
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 451 LARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSER 510
L RK+A +++ P A+G+S + G+A A+ ++K S+A + +K + T+ +
Sbjct: 40 LLRKQALQMKKR-----PVLAIGKSNTVSGIAKAIKTHFQKHSLAIVNVKGRAKGTSVQE 94
Query: 511 MVEDIKKLTGGTLLSRNKDFLVFYRG 536
+V +++ TG L+S+ ++ YRG
Sbjct: 95 VVFKLEQATGAVLVSQEPSKVILYRG 120
>gi|307106930|gb|EFN55174.1| hypothetical protein CHLNCDRAFT_52520 [Chlorella variabilis]
Length = 187
Score = 41.2 bits (95), Expect = 2.8, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 245 SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 304
SR + A +LP L++LR K ++ G + + + ++ R+ G
Sbjct: 56 SRANAA--SLPPGRLKQLRRDGLALKDVIKLGRRGPAEGLAN---------QVARVYCHG 104
Query: 305 APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYE 342
A NMK + + LE TGG+V+ ++G V LYRG ++
Sbjct: 105 KHAANMKVLVQQLEAATGGMVVHKAGGTVLLYRGDGWQ 142
>gi|147780327|emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]
Length = 331
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 236 GRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTS 295
G++ V+ R+ L E L ++E+R L + + GLT ++++IH WK
Sbjct: 179 GKFPVEGRTREEILGE-PLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQ 237
Query: 296 EIVRLKIEGAPALNMKRMHEILERKT 321
+ +++ +G P ++M + LE T
Sbjct: 238 RVCKVRCKGVPTIDMDNVCHHLEHHT 263
>gi|332288658|ref|YP_004419510.1| RNA-binding protein YhbY [Gallibacterium anatis UMN179]
gi|330431554|gb|AEC16613.1| RNA-binding protein YhbY [Gallibacterium anatis UMN179]
Length = 100
Score = 40.4 bits (93), Expect = 4.1, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 252 LTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMK 311
LTL + + L+ L + G GLT+ V+ I E++++KI G +
Sbjct: 3 LTLSTKQKQYLKGLAHHLNPVVMLGGNGLTEGVIAEIDNALNHHELIKVKISGVDREEKE 62
Query: 312 RMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKR 351
+ +ER+TG + R G + LYR + P++ L K+
Sbjct: 63 LVVAAIERETGACAVQRIGHILVLYR--PSDEPTIVLPKK 100
>gi|374335268|ref|YP_005091955.1| hypothetical protein GU3_07245 [Oceanimonas sp. GK1]
gi|372984955|gb|AEY01205.1| hypothetical protein GU3_07245 [Oceanimonas sp. GK1]
Length = 98
Score = 40.0 bits (92), Expect = 5.9, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 663 SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKK 722
++ +++R + L +K +LLG+ G+ +G + + L + EL+K+ V + D K
Sbjct: 2 TLNNKQRQYLKGLAHSLKPVVLLGQHGLTEGVLAEIDLALNHHELIKVKVAAEDRDVKKL 61
Query: 723 IALALEAESGGVLVSVDKISKGYAMVVYRGKDYQR 757
+ A+ E+G V V + G+ + +YR + ++
Sbjct: 62 VMDAIVRETGAVKVQ----TIGHILTIYRQSEQKK 92
>gi|284006436|emb|CBA71679.1| primosomal replication protein N'' [Arsenophonus nasoniae]
Length = 204
Score = 39.7 bits (91), Expect = 8.0, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 509 ERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLR 568
E + E IK + ++ D +FYR + LS + E Q +L ++ +
Sbjct: 37 EALSEQIKPIAHSAFITSRFDQKLFYRKSHQLSDCLFEIKQHFCQLKNAVITSRLEQVTF 96
Query: 569 ASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLD--------DSHKENLV-----REA 615
+ ++ I I + TL+E + +S+ K +D ++ L+ RE
Sbjct: 97 LTEKIIAQIGAITRESATQTLREQENQHSQKEKTVDRYERLVQHQDYERRLIAMINDREQ 156
Query: 616 E-VRRHAYLV-QKLEKKLARAERKLLRAERALSKVEESLKPAERQA 659
+ V++ +Y+ QKL++++A +L+R +ALS++E +++ E Q+
Sbjct: 157 QLVKQQSYVACQKLQQEIAALTGRLVRCRQALSRIERAIERDENQS 202
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,446,535,124
Number of Sequences: 23463169
Number of extensions: 656229756
Number of successful extensions: 1936745
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 854
Number of HSP's that attempted gapping in prelim test: 1930119
Number of HSP's gapped (non-prelim): 5484
length of query: 908
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 756
effective length of database: 8,792,793,679
effective search space: 6647352021324
effective search space used: 6647352021324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)